locus-tag class description M5598_RS00005 PF00308 Bacterial dnaA protein M5598_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix M5598_RS00005 PF11638 DnaA N-terminal domain M5598_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M5598_RS00010 PF02767 DNA polymerase III beta subunit, central domain M5598_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M5598_RS00015 PF02463 RecF/RecN/SMC N terminal domain M5598_RS00020 PF01751 Toprim domain M5598_RS00020 PF18053 DNA gyrase B subunit insert domain M5598_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS00020 PF00204 DNA gyrase B M5598_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus M5598_RS00030 PF00011 Hsp20/alpha crystallin family M5598_RS00035 PF00155 Aminotransferase class I and II M5598_RS00040 PF00128 Alpha amylase, catalytic domain M5598_RS00045 PF05746 DALR anticodon binding domain M5598_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit M5598_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit M5598_RS00055 PF01169 Uncharacterized protein family UPF0016 M5598_RS00065 PF01206 Sulfurtransferase TusA M5598_RS00075 PF03466 LysR substrate binding domain M5598_RS00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS00080 PF08240 Alcohol dehydrogenase GroES-like domain M5598_RS00080 PF00107 Zinc-binding dehydrogenase M5598_RS00085 PF02803 Thiolase, C-terminal domain M5598_RS00085 PF00108 Thiolase, N-terminal domain M5598_RS00090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M5598_RS00090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M5598_RS00090 PF00378 Enoyl-CoA hydratase/isomerase M5598_RS00095 PF01205 Uncharacterized protein family UPF0029 M5598_RS00095 PF09186 Domain of unknown function (DUF1949) M5598_RS00100 PF02386 Cation transport protein M5598_RS00105 PF12724 Flavodoxin domain M5598_RS00165 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M5598_RS00170 PF13667 ThiC-associated domain M5598_RS00170 PF01964 Radical SAM ThiC family M5598_RS00175 PF02581 Thiamine monophosphate synthase M5598_RS00180 PF00899 ThiF family M5598_RS00185 PF02597 ThiS family M5598_RS00190 PF05690 Thiazole biosynthesis protein ThiG M5598_RS00195 PF04055 Radical SAM superfamily M5598_RS00195 PF06968 Biotin and Thiamin Synthesis associated domain M5598_RS00200 PF00557 Metallopeptidase family M24 M5598_RS00200 PF01321 Creatinase/Prolidase N-terminal domain M5598_RS00200 PF01321 Creatinase/Prolidase N-terminal domain M5598_RS00200 PF00557 Metallopeptidase family M24 M5598_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS00205 PF03466 LysR substrate binding domain M5598_RS00210 PF07690 Major Facilitator Superfamily M5598_RS00230 PF05114 Protein of unknown function (DUF692) M5598_RS00240 PF00580 UvrD/REP helicase N-terminal domain M5598_RS00240 PF13361 UvrD-like helicase C-terminal domain M5598_RS00250 PF01810 LysE type translocator M5598_RS00260 PF00892 EamA-like transporter family M5598_RS00265 PF09382 RQC domain M5598_RS00265 PF00570 HRDC domain M5598_RS00265 PF00271 Helicase conserved C-terminal domain M5598_RS00265 PF16124 RecQ zinc-binding M5598_RS00265 PF00270 DEAD/DEAH box helicase M5598_RS00275 PF02592 Putative vitamin uptake transporter M5598_RS00280 PF02541 Ppx/GppA phosphatase family M5598_RS00285 PF00271 Helicase conserved C-terminal domain M5598_RS00285 PF00270 DEAD/DEAH box helicase M5598_RS00290 PF00085 Thioredoxin M5598_RS00295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5598_RS00295 PF07497 Rho termination factor, RNA-binding domain M5598_RS00295 PF07498 Rho termination factor, N-terminal domain M5598_RS00305 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M5598_RS00310 PF00111 2Fe-2S iron-sulfur cluster binding domain M5598_RS00315 PF00175 Oxidoreductase NAD-binding domain M5598_RS00350 PF07219 HemY protein N-terminus M5598_RS00355 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase M5598_RS00360 PF02602 Uroporphyrinogen-III synthase HemD M5598_RS00365 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M5598_RS00365 PF03900 Porphobilinogen deaminase, C-terminal domain M5598_RS00370 PF12633 Adenylate cyclase NT domain M5598_RS00370 PF01295 Adenylate cyclase, class-I M5598_RS00375 PF01491 Frataxin-like domain M5598_RS00385 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M5598_RS00385 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M5598_RS00390 PF01678 Diaminopimelate epimerase M5598_RS00400 PF00589 Phage integrase family M5598_RS00400 PF02899 Phage integrase, N-terminal SAM-like domain M5598_RS00405 PF13419 Haloacid dehalogenase-like hydrolase M5598_RS00410 PF08495 FIST N domain M5598_RS00410 PF10442 FIST C domain M5598_RS00410 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS00410 PF00563 EAL domain M5598_RS00415 PF03942 DTW domain M5598_RS00435 PF12146 Serine aminopeptidase, S33 M5598_RS00440 PF01810 LysE type translocator M5598_RS00445 PF08668 HDOD domain M5598_RS00445 PF00563 EAL domain M5598_RS00450 PF01022 Bacterial regulatory protein, arsR family M5598_RS00455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M5598_RS00455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M5598_RS00505 PF01914 MarC family integral membrane protein M5598_RS00520 PF02881 SRP54-type protein, helical bundle domain M5598_RS00520 PF00448 SRP54-type protein, GTPase domain M5598_RS00525 PF00005 ABC transporter M5598_RS00530 PF18075 FtsX extracellular domain M5598_RS00535 PF00140 Sigma-70 factor, region 1.2 M5598_RS00535 PF04542 Sigma-70 region 2 M5598_RS00535 PF04545 Sigma-70, region 4 M5598_RS00540 PF00581 Rhodanese-like domain M5598_RS00545 PF01694 Rhomboid family M5598_RS00545 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease M5598_RS00550 PF03748 Flagellar basal body-associated protein FliL M5598_RS00555 PF04345 Chorismate lyase M5598_RS00560 PF01040 UbiA prenyltransferase family M5598_RS00565 PF01553 Acyltransferase M5598_RS00570 PF01726 LexA DNA binding domain M5598_RS00570 PF00717 Peptidase S24-like M5598_RS00575 PF04072 Leucine carboxyl methyltransferase M5598_RS00580 PF01554 MatE M5598_RS00585 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS00585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5598_RS00590 PF00440 Bacterial regulatory proteins, tetR family M5598_RS00600 PF05958 tRNA (Uracil-5-)-methyltransferase M5598_RS00605 PF07715 TonB-dependent Receptor Plug Domain M5598_RS00605 PF00593 TonB dependent receptor M5598_RS00615 PF01177 Asp/Glu/Hydantoin racemase M5598_RS00680 PF13091 PLD-like domain M5598_RS00690 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M5598_RS00690 PF01565 FAD binding domain M5598_RS00695 PF08279 HTH domain M5598_RS00695 PF03099 Biotin/lipoate A/B protein ligase family M5598_RS00695 PF02237 Biotin protein ligase C terminal domain M5598_RS00700 PF00485 Phosphoribulokinase / Uridine kinase family M5598_RS00725 PF00009 Elongation factor Tu GTP binding domain M5598_RS00725 PF03144 Elongation factor Tu domain 2 M5598_RS00725 PF03143 Elongation factor Tu C-terminal domain M5598_RS00730 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M5598_RS00735 PF02357 Transcription termination factor nusG M5598_RS00735 PF00467 KOW motif M5598_RS00740 PF03946 Ribosomal protein L11, N-terminal domain M5598_RS00740 PF00298 Ribosomal protein L11, RNA binding domain M5598_RS00745 PF00687 Ribosomal protein L1p/L10e family M5598_RS00750 PF00466 Ribosomal protein L10 M5598_RS00755 PF00542 Ribosomal protein L7/L12 C-terminal domain M5598_RS00755 PF16320 Ribosomal protein L7/L12 dimerisation domain M5598_RS00760 PF04563 RNA polymerase beta subunit M5598_RS00760 PF04561 RNA polymerase Rpb2, domain 2 M5598_RS00760 PF04565 RNA polymerase Rpb2, domain 3 M5598_RS00760 PF10385 RNA polymerase beta subunit external 1 domain M5598_RS00760 PF04560 RNA polymerase Rpb2, domain 7 M5598_RS00760 PF00562 RNA polymerase Rpb2, domain 6 M5598_RS00765 PF00623 RNA polymerase Rpb1, domain 2 M5598_RS00765 PF04997 RNA polymerase Rpb1, domain 1 M5598_RS00765 PF04998 RNA polymerase Rpb1, domain 5 M5598_RS00765 PF05000 RNA polymerase Rpb1, domain 4 M5598_RS00765 PF04983 RNA polymerase Rpb1, domain 3 M5598_RS00770 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M5598_RS00775 PF09297 NADH pyrophosphatase zinc ribbon domain M5598_RS00775 PF00293 NUDIX domain M5598_RS00790 PF01208 Uroporphyrinogen decarboxylase (URO-D) M5598_RS00795 PF03167 Uracil DNA glycosylase superfamily M5598_RS00800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M5598_RS00805 PF04222 Protein of unknown function (DUF416) M5598_RS00810 PF00571 CBS domain M5598_RS00810 PF01595 Cyclin M transmembrane N-terminal domain M5598_RS00815 PF00216 Bacterial DNA-binding protein M5598_RS00825 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M5598_RS00825 PF02844 Phosphoribosylglycinamide synthetase, N domain M5598_RS00825 PF02843 Phosphoribosylglycinamide synthetase, C domain M5598_RS00830 PF01808 AICARFT/IMPCHase bienzyme M5598_RS00830 PF02142 MGS-like domain M5598_RS00835 PF13411 MerR HTH family regulatory protein M5598_RS00845 PF18500 CadC C-terminal domain 1 M5598_RS00845 PF00486 Transcriptional regulatory protein, C terminal M5598_RS00850 PF13520 Amino acid permease M5598_RS00855 PF01276 Orn/Lys/Arg decarboxylase, major domain M5598_RS00855 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M5598_RS00855 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M5598_RS00910 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS00910 PF05230 MASE2 domain M5598_RS00915 PF12848 ABC transporter M5598_RS00915 PF00005 ABC transporter M5598_RS00920 PF07690 Major Facilitator Superfamily M5598_RS00925 PF02954 Bacterial regulatory protein, Fis family M5598_RS00930 PF01207 Dihydrouridine synthase (Dus) M5598_RS00940 PF02785 Biotin carboxylase C-terminal domain M5598_RS00940 PF00289 Biotin carboxylase, N-terminal domain M5598_RS00940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M5598_RS00945 PF00364 Biotin-requiring enzyme M5598_RS00950 PF01220 Dehydroquinase class II M5598_RS00955 PF16177 Acetyl-coenzyme A synthetase N-terminus M5598_RS00955 PF00501 AMP-binding enzyme M5598_RS00955 PF13193 AMP-binding enzyme C-terminal domain M5598_RS00970 PF12832 MFS_1 like family M5598_RS00975 PF09308 LuxQ, periplasmic M5598_RS00975 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS00975 PF00072 Response regulator receiver domain M5598_RS00980 PF00206 Lyase M5598_RS00980 PF10415 Fumarase C C-terminus M5598_RS00995 PF00474 Sodium:solute symporter family M5598_RS01005 PF00999 Sodium/hydrogen exchanger family M5598_RS01005 PF02080 TrkA-C domain M5598_RS01005 PF03471 Transporter associated domain M5598_RS01010 PF00072 Response regulator receiver domain M5598_RS01010 PF00196 Bacterial regulatory proteins, luxR family M5598_RS01015 PF02683 Cytochrome C biogenesis protein transmembrane region M5598_RS01015 PF11412 Disulphide bond corrector protein DsbC M5598_RS01020 PF03605 Anaerobic c4-dicarboxylate membrane transporter M5598_RS01025 PF10415 Fumarase C C-terminus M5598_RS01025 PF00206 Lyase M5598_RS01030 PF04186 FxsA cytoplasmic membrane protein M5598_RS01035 PF00588 SpoU rRNA Methylase family M5598_RS01040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M5598_RS01040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M5598_RS01045 PF16527 Two-component sensor protein CpxA, periplasmic domain M5598_RS01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS01045 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS01045 PF00672 HAMP domain M5598_RS01050 PF00072 Response regulator receiver domain M5598_RS01050 PF00486 Transcriptional regulatory protein, C terminal M5598_RS01055 PF07813 LTXXQ motif family protein M5598_RS01060 PF01545 Cation efflux family M5598_RS01060 PF16916 Dimerisation domain of Zinc Transporter M5598_RS01065 PF00365 Phosphofructokinase M5598_RS01070 PF01554 MatE M5598_RS01075 PF00166 Chaperonin 10 Kd subunit M5598_RS01080 PF00118 TCP-1/cpn60 chaperonin family M5598_RS01090 PF02308 MgtC family M5598_RS01095 PF00842 Alanine racemase, C-terminal domain M5598_RS01095 PF01168 Alanine racemase, N-terminal domain M5598_RS01100 PF04055 Radical SAM superfamily M5598_RS01105 PF09285 Elongation factor P, C-terminal M5598_RS01105 PF08207 Elongation factor P (EF-P) KOW-like domain M5598_RS01105 PF01132 Elongation factor P (EF-P) OB domain M5598_RS01115 PF02313 Fumarate reductase subunit D M5598_RS01120 PF02300 Fumarate reductase subunit C M5598_RS01125 PF13085 2Fe-2S iron-sulfur cluster binding domain M5598_RS01125 PF13183 4Fe-4S dicluster domain M5598_RS01130 PF00890 FAD binding domain M5598_RS01130 PF02910 Fumarate reductase flavoprotein C-term M5598_RS01135 PF00152 tRNA synthetases class II (D, K and N) M5598_RS01145 PF08360 QacR-like protein, C-terminal region M5598_RS01145 PF00440 Bacterial regulatory proteins, tetR family M5598_RS01155 PF01551 Peptidase family M23 M5598_RS01160 PF00132 Bacterial transferase hexapeptide (six repeats) M5598_RS01160 PF06426 Serine acetyltransferase, N-terminal M5598_RS01165 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M5598_RS01165 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M5598_RS01170 PF02556 Preprotein translocase subunit SecB M5598_RS01175 PF00581 Rhodanese-like domain M5598_RS01180 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M5598_RS01180 PF01676 Metalloenzyme superfamily M5598_RS01190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS01190 PF00672 HAMP domain M5598_RS01195 PF00939 Sodium:sulfate symporter transmembrane region M5598_RS01200 PF02666 Phosphatidylserine decarboxylase M5598_RS01205 PF03193 RsgA GTPase M5598_RS01210 PF00929 Exonuclease M5598_RS01280 PF08331 Domain of unknown function (DUF1730) M5598_RS01285 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M5598_RS01290 PF01520 N-acetylmuramoyl-L-alanine amidase M5598_RS01295 PF08676 MutL C terminal dimerisation domain M5598_RS01295 PF01119 DNA mismatch repair protein, C-terminal domain M5598_RS01305 PF17209 Hfq protein M5598_RS01310 PF01926 50S ribosome-binding GTPase M5598_RS01310 PF13167 GTP-binding GTPase N-terminal M5598_RS01310 PF16360 GTP-binding GTPase Middle Region M5598_RS01315 PF12221 Bacterial membrane protein N terminal M5598_RS01315 PF01145 SPFH domain / Band 7 family M5598_RS01320 PF01145 SPFH domain / Band 7 family M5598_RS01325 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) M5598_RS01330 PF00709 Adenylosuccinate synthetase M5598_RS01335 PF08238 Sel1 repeat M5598_RS01340 PF00970 Oxidoreductase FAD-binding domain M5598_RS01340 PF00042 Globin M5598_RS01340 PF00175 Oxidoreductase NAD-binding domain M5598_RS01345 PF02082 Transcriptional regulator M5598_RS01350 PF00773 RNB domain M5598_RS01350 PF17876 Cold shock domain M5598_RS01350 PF08461 Ribonuclease R winged-helix domain M5598_RS01350 PF08206 Ribonuclease B OB domain M5598_RS01350 PF00575 S1 RNA binding domain M5598_RS01355 PF00588 SpoU rRNA Methylase family M5598_RS01355 PF08032 RNA 2'-O ribose methyltransferase substrate binding M5598_RS01360 PF13419 Haloacid dehalogenase-like hydrolase M5598_RS01365 PF00579 tRNA synthetases class I (W and Y) M5598_RS01380 PF00117 Glutamine amidotransferase class-I M5598_RS01385 PF00202 Aminotransferase class-III M5598_RS01390 PF04958 Arginine N-succinyltransferase beta subunit M5598_RS01395 PF00171 Aldehyde dehydrogenase family M5598_RS01405 PF00027 Cyclic nucleotide-binding domain M5598_RS01405 PF13545 Crp-like helix-turn-helix domain M5598_RS01410 PF00485 Phosphoribulokinase / Uridine kinase family M5598_RS01415 PF06794 Uncharacterised protein family (UPF0270) M5598_RS01420 PF00561 alpha/beta hydrolase fold M5598_RS01430 PF12848 ABC transporter M5598_RS01430 PF00005 ABC transporter M5598_RS01435 PF02525 Flavodoxin-like fold M5598_RS01440 PF00999 Sodium/hydrogen exchanger family M5598_RS01440 PF02254 TrkA-N domain M5598_RS01450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M5598_RS01455 PF01112 Asparaginase M5598_RS01460 PF04102 SlyX M5598_RS01470 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M5598_RS01470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M5598_RS01475 PF13309 HTH domain M5598_RS01475 PF08348 YheO-like PAS domain M5598_RS01480 PF02635 DsrE/DsrF-like family M5598_RS01485 PF02635 DsrE/DsrF-like family M5598_RS01490 PF04077 DsrH like protein M5598_RS01495 PF00164 Ribosomal protein S12/S23 M5598_RS01500 PF00177 Ribosomal protein S7p/S5e M5598_RS01505 PF14492 Elongation Factor G, domain II M5598_RS01505 PF03764 Elongation factor G, domain IV M5598_RS01505 PF00009 Elongation factor Tu GTP binding domain M5598_RS01505 PF03144 Elongation factor Tu domain 2 M5598_RS01505 PF00679 Elongation factor G C-terminus M5598_RS01510 PF03143 Elongation factor Tu C-terminal domain M5598_RS01510 PF03144 Elongation factor Tu domain 2 M5598_RS01510 PF00009 Elongation factor Tu GTP binding domain M5598_RS01515 PF04324 BFD-like [2Fe-2S] binding domain M5598_RS01520 PF00210 Ferritin-like domain M5598_RS01525 PF03949 Malic enzyme, NAD binding domain M5598_RS01525 PF00390 Malic enzyme, N-terminal domain M5598_RS01530 PF01340 Met Apo-repressor, MetJ M5598_RS01535 PF01053 Cys/Met metabolism PLP-dependent enzyme M5598_RS01540 PF00696 Amino acid kinase family M5598_RS01540 PF00742 Homoserine dehydrogenase M5598_RS01540 PF03447 Homoserine dehydrogenase, NAD binding domain M5598_RS01545 PF02219 Methylenetetrahydrofolate reductase M5598_RS01555 PF00311 Phosphoenolpyruvate carboxylase M5598_RS01560 PF07687 Peptidase dimerisation domain M5598_RS01560 PF01546 Peptidase family M20/M25/M40 M5598_RS01565 PF02774 Semialdehyde dehydrogenase, dimerisation domain M5598_RS01565 PF01118 Semialdehyde dehydrogenase, NAD binding domain M5598_RS01570 PF00696 Amino acid kinase family M5598_RS01575 PF00764 Arginosuccinate synthase M5598_RS01580 PF00206 Lyase M5598_RS01580 PF14698 Argininosuccinate lyase C-terminal M5598_RS01580 PF00583 Acetyltransferase (GNAT) family M5598_RS01590 PF00462 Glutaredoxin M5598_RS01590 PF08534 Redoxin M5598_RS01595 PF03466 LysR substrate binding domain M5598_RS01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS01600 PF17092 Penicillin-binding protein OB-like domain M5598_RS01600 PF00912 Transglycosylase M5598_RS01600 PF00905 Penicillin binding protein transpeptidase domain M5598_RS01610 PF05137 Fimbrial assembly protein (PilN) M5598_RS01620 PF04351 Pilus assembly protein, PilP M5598_RS01625 PF00263 Bacterial type II and III secretion system protein M5598_RS01625 PF11741 AMIN domain M5598_RS01625 PF07660 Secretin and TonB N terminus short domain M5598_RS01625 PF03958 Bacterial type II/III secretion system short domain M5598_RS01630 PF01202 Shikimate kinase M5598_RS01635 PF01761 3-dehydroquinate synthase M5598_RS01645 PF02086 D12 class N6 adenine-specific DNA methyltransferase M5598_RS01650 PF00834 Ribulose-phosphate 3 epimerase family M5598_RS01655 PF01250 Ribosomal protein S6 M5598_RS01660 PF00436 Single-strand binding protein family M5598_RS01665 PF01084 Ribosomal protein S18 M5598_RS01670 PF03948 Ribosomal protein L9, C-terminal domain M5598_RS01670 PF01281 Ribosomal protein L9, N-terminal domain M5598_RS01680 PF03796 DnaB-like helicase C terminal domain M5598_RS01680 PF00772 DnaB-like helicase N terminal domain M5598_RS01685 PF01168 Alanine racemase, N-terminal domain M5598_RS01685 PF00842 Alanine racemase, C-terminal domain M5598_RS01695 PF01894 Uncharacterised protein family UPF0047 M5598_RS01700 PF00342 Phosphoglucose isomerase M5598_RS01710 PF01475 Ferric uptake regulator family M5598_RS01715 PF01207 Dihydrouridine synthase (Dus) M5598_RS01735 PF00667 FAD binding domain M5598_RS01735 PF00258 Flavodoxin M5598_RS01735 PF00175 Oxidoreductase NAD-binding domain M5598_RS01740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M5598_RS01740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M5598_RS01745 PF01507 Phosphoadenosine phosphosulfate reductase family M5598_RS01805 PF00999 Sodium/hydrogen exchanger family M5598_RS01810 PF02574 Homocysteine S-methyltransferase M5598_RS01810 PF00809 Pterin binding enzyme M5598_RS01810 PF02607 B12 binding domain M5598_RS01810 PF02310 B12 binding domain M5598_RS01810 PF02965 Vitamin B12 dependent methionine synthase, activation domain M5598_RS01815 PF00696 Amino acid kinase family M5598_RS01815 PF01842 ACT domain M5598_RS01820 PF00266 Aminotransferase class-V M5598_RS01830 PF00005 ABC transporter M5598_RS01830 PF17755 UvrA DNA-binding domain M5598_RS01830 PF17760 UvrA interaction domain M5598_RS01835 PF00483 Nucleotidyl transferase M5598_RS01840 PF00196 Bacterial regulatory proteins, luxR family M5598_RS01845 PF00436 Single-strand binding protein family M5598_RS01850 PF00563 EAL domain M5598_RS01850 PF17157 Gammaproteobacterial periplasmic sensor domain M5598_RS01850 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS01870 PF07660 Secretin and TonB N terminus short domain M5598_RS01870 PF03958 Bacterial type II/III secretion system short domain M5598_RS01870 PF11741 AMIN domain M5598_RS01870 PF00263 Bacterial type II and III secretion system protein M5598_RS01875 PF13401 AAA domain M5598_RS01875 PF01471 Putative peptidoglycan binding domain M5598_RS01885 PF00437 Type II/IV secretion system protein M5598_RS01885 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M5598_RS01890 PF00482 Type II secretion system (T2SS), protein F M5598_RS01900 PF07963 Prokaryotic N-terminal methylation motif M5598_RS01940 PF04085 rod shape-determining protein MreC M5598_RS01945 PF04093 rod shape-determining protein MreD M5598_RS01950 PF02545 Maf-like protein M5598_RS01955 PF00575 S1 RNA binding domain M5598_RS01955 PF10150 Ribonuclease E/G family M5598_RS01960 PF13502 AsmA-like C-terminal region M5598_RS01960 PF13116 Protein of unknown function M5598_RS01965 PF00795 Carbon-nitrogen hydrolase M5598_RS01970 PF01523 Putative modulator of DNA gyrase M5598_RS01975 PF02562 PhoH-like protein M5598_RS01975 PF13638 PIN domain M5598_RS01980 PF12137 RNA polymerase recycling family C-terminal M5598_RS01980 PF00176 SNF2 family N-terminal domain M5598_RS01980 PF18339 RapA N-terminal Tudor like domain 1 M5598_RS01980 PF18337 RapA N-terminal Tudor like domain M5598_RS01980 PF00271 Helicase conserved C-terminal domain M5598_RS01990 PF00849 RNA pseudouridylate synthase M5598_RS01995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M5598_RS01995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M5598_RS02000 PF04751 Protein of unknown function (DUF615) M5598_RS02005 PF01523 Putative modulator of DNA gyrase M5598_RS02010 PF00571 CBS domain M5598_RS02010 PF01769 Divalent cation transporter M5598_RS02010 PF03448 MgtE intracellular N domain M5598_RS02015 PF00381 PTS HPr component phosphorylation site M5598_RS02020 PF03668 P-loop ATPase protein family M5598_RS02025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5598_RS02030 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M5598_RS02035 PF00309 Sigma-54 factor, Activator interacting domain (AID) M5598_RS02035 PF04963 Sigma-54 factor, core binding domain M5598_RS02035 PF04552 Sigma-54, DNA binding domain M5598_RS02040 PF00005 ABC transporter M5598_RS02040 PF12399 Branched-chain amino acid ATP-binding cassette transporter M5598_RS02045 PF03968 OstA-like protein M5598_RS02055 PF00571 CBS domain M5598_RS02055 PF01380 SIS domain M5598_RS02060 PF01699 Sodium/calcium exchanger protein M5598_RS02065 PF00005 ABC transporter M5598_RS02070 PF02405 Permease MlaE M5598_RS02075 PF02470 MlaD protein M5598_RS02080 PF05494 MlaC protein M5598_RS02090 PF01722 BolA-like protein M5598_RS02095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M5598_RS02100 PF01553 Acyltransferase M5598_RS02105 PF01042 Endoribonuclease L-PSP M5598_RS02110 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain M5598_RS02110 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain M5598_RS02115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M5598_RS02115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M5598_RS02125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M5598_RS02125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M5598_RS02135 PF06877 Regulator of ribonuclease activity B M5598_RS02145 PF00583 Acetyltransferase (GNAT) family M5598_RS02155 PF00133 tRNA synthetases class I (I, L, M and V) M5598_RS02155 PF10458 Valyl tRNA synthetase tRNA binding arm M5598_RS02155 PF08264 Anticodon-binding domain of tRNA M5598_RS02160 PF04364 DNA polymerase III chi subunit, HolC M5598_RS02165 PF00883 Cytosol aminopeptidase family, catalytic domain M5598_RS02165 PF02789 Cytosol aminopeptidase family, N-terminal domain M5598_RS02170 PF03739 Lipopolysaccharide export system permease LptF/LptG M5598_RS02175 PF03739 Lipopolysaccharide export system permease LptF/LptG M5598_RS02185 PF10011 Predicted membrane protein (DUF2254) M5598_RS02190 PF00106 short chain dehydrogenase M5598_RS02280 PF01522 Polysaccharide deacetylase M5598_RS02285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5598_RS02290 PF02378 Phosphotransferase system, EIIC M5598_RS02295 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M5598_RS02300 PF11975 Family 4 glycosyl hydrolase C-terminal domain M5598_RS02300 PF02056 Family 4 glycosyl hydrolase M5598_RS02305 PF04794 YdjC-like protein M5598_RS02310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M5598_RS02310 PF00356 Bacterial regulatory proteins, lacI family M5598_RS02315 PF00072 Response regulator receiver domain M5598_RS02360 PF00171 Aldehyde dehydrogenase family M5598_RS02390 PF17200 Single Cache domain 2 M5598_RS02390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS02390 PF00672 HAMP domain M5598_RS02430 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M5598_RS02430 PF01464 Transglycosylase SLT domain M5598_RS02435 PF04362 Bacterial Fe(2+) trafficking M5598_RS02440 PF00730 HhH-GPD superfamily base excision DNA repair protein M5598_RS02440 PF14815 NUDIX domain M5598_RS02440 PF00633 Helix-hairpin-helix motif M5598_RS02445 PF02390 Putative methyltransferase M5598_RS02450 PF02086 D12 class N6 adenine-specific DNA methyltransferase M5598_RS02455 PF04960 Glutaminase M5598_RS02460 PF06969 HemN C-terminal domain M5598_RS02460 PF04055 Radical SAM superfamily M5598_RS02465 PF01725 Ham1 family M5598_RS02475 PF02594 Uncharacterised ACR, YggU family COG1872 M5598_RS02480 PF02325 YGGT family M5598_RS02485 PF03807 NADP oxidoreductase coenzyme F420-dependent M5598_RS02485 PF14748 Pyrroline-5-carboxylate reductase dimerisation M5598_RS02490 PF01168 Alanine racemase, N-terminal domain M5598_RS02495 PF00437 Type II/IV secretion system protein M5598_RS02500 PF00437 Type II/IV secretion system protein M5598_RS02505 PF03652 Holliday junction resolvase M5598_RS02510 PF02622 Uncharacterized ACR, COG1678 M5598_RS02515 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M5598_RS02515 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M5598_RS02520 PF04452 RNA methyltransferase M5598_RS02525 PF04231 Endonuclease I M5598_RS02530 PF17283 SprT-like zinc ribbon domain M5598_RS02530 PF10263 SprT-like family M5598_RS02540 PF02772 S-adenosylmethionine synthetase, central domain M5598_RS02540 PF00438 S-adenosylmethionine synthetase, N-terminal domain M5598_RS02540 PF02773 S-adenosylmethionine synthetase, C-terminal domain M5598_RS02545 PF02779 Transketolase, pyrimidine binding domain M5598_RS02545 PF02780 Transketolase, C-terminal domain M5598_RS02545 PF00456 Transketolase, thiamine diphosphate binding domain M5598_RS02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS02550 PF03466 LysR substrate binding domain M5598_RS02555 PF00593 TonB dependent receptor M5598_RS02555 PF07715 TonB-dependent Receptor Plug Domain M5598_RS02560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M5598_RS02560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M5598_RS02565 PF00162 Phosphoglycerate kinase M5598_RS02570 PF01116 Fructose-bisphosphate aldolase class-II M5598_RS02575 PF00924 Mechanosensitive ion channel M5598_RS02575 PF05552 Conserved TM helix M5598_RS02580 PF04073 Aminoacyl-tRNA editing domain M5598_RS02585 PF01810 LysE type translocator M5598_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS02590 PF03466 LysR substrate binding domain M5598_RS02595 PF04402 Protein of unknown function (DUF541) M5598_RS02600 PF01842 ACT domain M5598_RS02600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M5598_RS02600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M5598_RS02605 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M5598_RS02610 PF01812 5-formyltetrahydrofolate cyclo-ligase family M5598_RS02620 PF05164 Cell division protein ZapA M5598_RS02625 PF03695 Uncharacterised protein family (UPF0149) M5598_RS02630 PF01494 FAD binding domain M5598_RS02635 PF01494 FAD binding domain M5598_RS02650 PF01571 Aminomethyltransferase folate-binding domain M5598_RS02655 PF03937 Flavinator of succinate dehydrogenase M5598_RS02660 PF02910 Fumarate reductase flavoprotein C-term M5598_RS02660 PF00890 FAD binding domain M5598_RS02665 PF04542 Sigma-70 region 2 M5598_RS02665 PF08281 Sigma-70, region 4 M5598_RS02670 PF03872 Anti sigma-E protein RseA, N-terminal domain M5598_RS02670 PF03873 Anti sigma-E protein RseA, C-terminal domain M5598_RS02675 PF17188 MucB/RseB C-terminal domain M5598_RS02675 PF03888 MucB/RseB N-terminal domain M5598_RS02685 PF00009 Elongation factor Tu GTP binding domain M5598_RS02685 PF00679 Elongation factor G C-terminus M5598_RS02685 PF06421 GTP-binding protein LepA C-terminus M5598_RS02685 PF03144 Elongation factor Tu domain 2 M5598_RS02690 PF10502 Signal peptidase, peptidase S26 M5598_RS02695 PF00035 Double-stranded RNA binding motif M5598_RS02695 PF14622 Ribonuclease-III-like M5598_RS02700 PF07650 KH domain M5598_RS02700 PF01926 50S ribosome-binding GTPase M5598_RS02705 PF02565 Recombination protein O C terminal M5598_RS02705 PF11967 Recombination protein O N terminal M5598_RS02710 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M5598_RS02715 PF01648 4'-phosphopantetheinyl transferase superfamily M5598_RS02720 PF00672 HAMP domain M5598_RS02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS02720 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS02720 PF01627 Hpt domain M5598_RS02720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M5598_RS02720 PF00072 Response regulator receiver domain M5598_RS02725 PF01938 TRAM domain M5598_RS02725 PF05958 tRNA (Uracil-5-)-methyltransferase M5598_RS02730 PF13291 ACT domain M5598_RS02730 PF04607 Region found in RelA / SpoT proteins M5598_RS02730 PF02824 TGS domain M5598_RS02735 PF03819 MazG nucleotide pyrophosphohydrolase domain M5598_RS02740 PF00117 Glutamine amidotransferase class-I M5598_RS02740 PF06418 CTP synthase N-terminus M5598_RS02745 PF03952 Enolase, N-terminal domain M5598_RS02745 PF00113 Enolase, C-terminal TIM barrel domain M5598_RS02750 PF04977 Septum formation initiator M5598_RS02755 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M5598_RS02760 PF02542 YgbB family M5598_RS02765 PF01142 tRNA pseudouridine synthase D (TruD) M5598_RS02770 PF01975 Survival protein SurE M5598_RS02780 PF01476 LysM domain M5598_RS02780 PF01551 Peptidase family M23 M5598_RS02785 PF04542 Sigma-70 region 2 M5598_RS02785 PF04539 Sigma-70 region 3 M5598_RS02785 PF04545 Sigma-70, region 4 M5598_RS02785 PF00140 Sigma-70 factor, region 1.2 M5598_RS02790 PF00488 MutS domain V M5598_RS02790 PF05190 MutS family domain IV M5598_RS02790 PF05188 MutS domain II M5598_RS02790 PF01624 MutS domain I M5598_RS02790 PF05192 MutS domain III M5598_RS02795 PF02464 Competence-damaged protein M5598_RS02800 PF00154 recA bacterial DNA recombination protein M5598_RS02805 PF02631 RecX family M5598_RS02810 PF02272 DHHA1 domain M5598_RS02810 PF01411 tRNA synthetases class II (A) M5598_RS02810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M5598_RS02815 PF00696 Amino acid kinase family M5598_RS02815 PF13840 ACT domain M5598_RS02815 PF01842 ACT domain M5598_RS02820 PF02599 Global regulator protein family M5598_RS02880 PF04277 Oxaloacetate decarboxylase, gamma chain M5598_RS02885 PF00364 Biotin-requiring enzyme M5598_RS02885 PF00682 HMGL-like M5598_RS02885 PF02436 Conserved carboxylase domain M5598_RS02890 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit M5598_RS02895 PF08240 Alcohol dehydrogenase GroES-like domain M5598_RS02895 PF00107 Zinc-binding dehydrogenase M5598_RS02900 PF09335 SNARE associated Golgi protein M5598_RS02905 PF00675 Insulinase (Peptidase family M16) M5598_RS02905 PF05193 Peptidase M16 inactive domain M5598_RS02910 PF04262 Glutamate-cysteine ligase M5598_RS02920 PF02664 S-Ribosylhomocysteinase (LuxS) M5598_RS02925 PF00571 CBS domain M5598_RS02925 PF03471 Transporter associated domain M5598_RS02925 PF01595 Cyclin M transmembrane N-terminal domain M5598_RS02930 PF01578 Cytochrome C assembly protein M5598_RS02935 PF00448 SRP54-type protein, GTPase domain M5598_RS02935 PF02881 SRP54-type protein, helical bundle domain M5598_RS02935 PF02978 Signal peptide binding domain M5598_RS02940 PF00886 Ribosomal protein S16 M5598_RS02945 PF05239 PRC-barrel domain M5598_RS02945 PF01782 RimM N-terminal domain M5598_RS02950 PF01746 tRNA (Guanine-1)-methyltransferase M5598_RS02955 PF01245 Ribosomal protein L19 M5598_RS02960 PF03884 DNA gyrase inhibitor YacG M5598_RS02965 PF07072 Cell division protein M5598_RS02970 PF01121 Dephospho-CoA kinase M5598_RS02975 PF06750 Bacterial Peptidase A24 N-terminal domain M5598_RS02975 PF01478 Type IV leader peptidase family M5598_RS02980 PF00482 Type II secretion system (T2SS), protein F M5598_RS02985 PF00437 Type II/IV secretion system protein M5598_RS02985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M5598_RS02995 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M5598_RS02995 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M5598_RS03000 PF01510 N-acetylmuramoyl-L-alanine amidase M5598_RS03005 PF00392 Bacterial regulatory proteins, gntR family M5598_RS03005 PF07729 FCD domain M5598_RS03010 PF17831 Pyruvate dehydrogenase E1 component middle domain M5598_RS03010 PF00456 Transketolase, thiamine diphosphate binding domain M5598_RS03015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M5598_RS03015 PF00364 Biotin-requiring enzyme M5598_RS03015 PF02817 e3 binding domain M5598_RS03020 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS03020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5598_RS03025 PF00440 Bacterial regulatory proteins, tetR family M5598_RS03030 PF00156 Phosphoribosyl transferase domain M5598_RS03035 PF00484 Carbonic anhydrase M5598_RS03040 PF00916 Sulfate permease family M5598_RS03040 PF01740 STAS domain M5598_RS03045 PF00005 ABC transporter M5598_RS03050 PF01061 ABC-2 type transporter M5598_RS03055 PF03279 Bacterial lipid A biosynthesis acyltransferase M5598_RS03060 PF02569 Pantoate-beta-alanine ligase M5598_RS03065 PF02548 Ketopantoate hydroxymethyltransferase M5598_RS03070 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M5598_RS03075 PF12627 Probable RNA and SrmB- binding site of polymerase A M5598_RS03075 PF01743 Poly A polymerase head domain M5598_RS03075 PF12626 Polymerase A arginine-rich C-terminus M5598_RS03080 PF00749 tRNA synthetases class I (E and Q), catalytic domain M5598_RS03085 PF01258 Prokaryotic dksA/traR C4-type zinc finger M5598_RS03090 PF03749 Sugar fermentation stimulation protein RE domain M5598_RS03090 PF17746 SfsA N-terminal OB domain M5598_RS03095 PF08482 ATP-dependent helicase C-terminal M5598_RS03095 PF00270 DEAD/DEAH box helicase M5598_RS03095 PF04408 Helicase associated domain (HA2) M5598_RS03095 PF00271 Helicase conserved C-terminal domain M5598_RS03100 PF00912 Transglycosylase M5598_RS03100 PF00905 Penicillin binding protein transpeptidase domain M5598_RS03100 PF14814 Bifunctional transglycosylase second domain M5598_RS03105 PF01734 Patatin-like phospholipase M5598_RS03110 PF11791 Aconitate B N-terminal domain M5598_RS03110 PF06434 Aconitate hydratase 2 N-terminus M5598_RS03110 PF00330 Aconitase family (aconitate hydratase) M5598_RS03115 PF06062 Uncharacterised protein family (UPF0231) M5598_RS03120 PF00543 Nitrogen regulatory protein P-II M5598_RS03125 PF00909 Ammonium Transporter Family M5598_RS03130 PF13416 Bacterial extracellular solute-binding protein M5598_RS03140 PF08402 TOBE domain M5598_RS03140 PF00005 ABC transporter M5598_RS03145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M5598_RS03145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M5598_RS03145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M5598_RS03145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M5598_RS03150 PF06165 Glycosyltransferase family 36 M5598_RS03150 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M5598_RS03155 PF00728 Glycosyl hydrolase family 20, catalytic domain M5598_RS03155 PF02838 Glycosyl hydrolase family 20, domain 2 M5598_RS03160 PF01869 BadF/BadG/BcrA/BcrD ATPase family M5598_RS03170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS03170 PF00005 ABC transporter M5598_RS03175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS03175 PF00005 ABC transporter M5598_RS03180 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS03180 PF12911 N-terminal TM domain of oligopeptide transport permease C M5598_RS03185 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS03190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS03195 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS03195 PF00072 Response regulator receiver domain M5598_RS03195 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS03200 PF05175 Methyltransferase small domain M5598_RS03200 PF08468 Methyltransferase small domain N-terminal M5598_RS03205 PF01594 AI-2E family transporter M5598_RS03210 PF00202 Aminotransferase class-III M5598_RS03215 PF01521 Iron-sulphur cluster biosynthesis M5598_RS03225 PF00873 AcrB/AcrD/AcrF family M5598_RS03230 PF01551 Peptidase family M23 M5598_RS03230 PF01476 LysM domain M5598_RS03230 PF08525 Opacity-associated protein A N-terminal motif M5598_RS03235 PF00579 tRNA synthetases class I (W and Y) M5598_RS03240 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS03240 PF01464 Transglycosylase SLT domain M5598_RS03245 PF02769 AIR synthase related protein, C-terminal domain M5598_RS03245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M5598_RS03245 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M5598_RS03270 PF07687 Peptidase dimerisation domain M5598_RS03270 PF01546 Peptidase family M20/M25/M40 M5598_RS03275 PF00860 Permease family M5598_RS03280 PF00156 Phosphoribosyl transferase domain M5598_RS03285 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) M5598_RS03290 PF07417 Sigma factor-binding transcriptional regulator Crl M5598_RS03295 PF00696 Amino acid kinase family M5598_RS03295 PF01472 PUA domain M5598_RS03300 PF00171 Aldehyde dehydrogenase family M5598_RS03305 PF03477 ATP cone domain M5598_RS03310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5598_RS03310 PF01872 RibD C-terminal domain M5598_RS03315 PF00677 Lumazine binding domain M5598_RS03320 PF00925 GTP cyclohydrolase II M5598_RS03320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M5598_RS03325 PF00885 6,7-dimethyl-8-ribityllumazine synthase M5598_RS03330 PF01029 NusB family M5598_RS03335 PF00586 AIR synthase related protein, N-terminal domain M5598_RS03335 PF02769 AIR synthase related protein, C-terminal domain M5598_RS03340 PF04608 Phosphatidylglycerophosphatase A M5598_RS03345 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M5598_RS03345 PF02779 Transketolase, pyrimidine binding domain M5598_RS03345 PF02780 Transketolase, C-terminal domain M5598_RS03350 PF00348 Polyprenyl synthetase M5598_RS03355 PF02609 Exonuclease VII small subunit M5598_RS03360 PF01618 MotA/TolQ/ExbB proton channel family M5598_RS03365 PF00691 OmpA family M5598_RS03370 PF02926 THUMP domain M5598_RS03370 PF02568 Thiamine biosynthesis protein (ThiI) M5598_RS03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS03375 PF03466 LysR substrate binding domain M5598_RS03385 PF04241 Protein of unknown function (DUF423) M5598_RS03390 PF01728 FtsJ-like methyltransferase M5598_RS03390 PF18125 RlmM ferredoxin-like domain M5598_RS03395 PF01223 DNA/RNA non-specific endonuclease M5598_RS03400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M5598_RS03400 PF01367 5'-3' exonuclease, C-terminal SAM fold M5598_RS03405 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M5598_RS03405 PF11892 Domain of unknown function (DUF3412) M5598_RS03405 PF03641 Possible lysine decarboxylase M5598_RS03410 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS03420 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M5598_RS03420 PF14489 QueF-like protein M5598_RS03425 PF07348 Syd protein (SUKH-2) M5598_RS03430 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) M5598_RS03435 PF03180 NLPA lipoprotein M5598_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS03445 PF09383 NIL domain M5598_RS03445 PF00005 ABC transporter M5598_RS03455 PF00356 Bacterial regulatory proteins, lacI family M5598_RS03460 PF02378 Phosphotransferase system, EIIC M5598_RS03460 PF00367 phosphotransferase system, EIIB M5598_RS03465 PF00128 Alpha amylase, catalytic domain M5598_RS03465 PF16657 Maltogenic Amylase, C-terminal domain M5598_RS03475 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M5598_RS03475 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M5598_RS03480 PF00464 Serine hydroxymethyltransferase M5598_RS03485 PF04055 Radical SAM superfamily M5598_RS03485 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M5598_RS03490 PF03099 Biotin/lipoate A/B protein ligase family M5598_RS03495 PF04359 Protein of unknown function (DUF493) M5598_RS03500 PF07943 Penicillin-binding protein 5, C-terminal domain M5598_RS03500 PF00768 D-alanyl-D-alanine carboxypeptidase M5598_RS03505 PF05036 Sporulation related domain M5598_RS03505 PF03330 Lytic transglycolase M5598_RS03510 PF01098 Cell cycle protein M5598_RS03515 PF03717 Penicillin-binding Protein dimerisation domain M5598_RS03515 PF00905 Penicillin binding protein transpeptidase domain M5598_RS03520 PF02590 Predicted SPOUT methyltransferase M5598_RS03530 PF06144 DNA polymerase III, delta subunit M5598_RS03530 PF14840 Processivity clamp loader gamma complex DNA pol III C-term M5598_RS03535 PF04390 Lipopolysaccharide-assembly M5598_RS03540 PF08264 Anticodon-binding domain of tRNA M5598_RS03540 PF00133 tRNA synthetases class I (I, L, M and V) M5598_RS03540 PF13603 Leucyl-tRNA synthetase, Domain 2 M5598_RS03545 PF07295 Zinc-ribbon containing domain M5598_RS03550 PF00795 Carbon-nitrogen hydrolase M5598_RS03555 PF03471 Transporter associated domain M5598_RS03555 PF00571 CBS domain M5598_RS03560 PF02130 Uncharacterized protein family UPF0054 M5598_RS03565 PF02562 PhoH-like protein M5598_RS03570 PF01938 TRAM domain M5598_RS03570 PF00919 Uncharacterized protein family UPF0004 M5598_RS03570 PF04055 Radical SAM superfamily M5598_RS03575 PF01494 FAD binding domain M5598_RS03685 PF06071 Protein of unknown function (DUF933) M5598_RS03685 PF01926 50S ribosome-binding GTPase M5598_RS03690 PF01195 Peptidyl-tRNA hydrolase M5598_RS03695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M5598_RS03695 PF14572 Phosphoribosyl synthetase-associated domain M5598_RS03700 PF08544 GHMP kinases C terminal M5598_RS03700 PF00288 GHMP kinases N terminal domain M5598_RS03705 PF03550 Outer membrane lipoprotein LolB M5598_RS03710 PF01488 Shikimate / quinate 5-dehydrogenase M5598_RS03710 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M5598_RS03710 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M5598_RS03715 PF03462 PCRF domain M5598_RS03715 PF00472 RF-1 domain M5598_RS03720 PF13847 Methyltransferase domain M5598_RS03720 PF17827 PrmC N-terminal domain M5598_RS03725 PF04247 Invasion gene expression up-regulator, SirB M5598_RS03730 PF13369 Transglutaminase-like superfamily M5598_RS03735 PF00793 DAHP synthetase I family M5598_RS03740 PF02872 5'-nucleotidase, C-terminal domain M5598_RS03740 PF00149 Calcineurin-like phosphoesterase M5598_RS03745 PF04073 Aminoacyl-tRNA editing domain M5598_RS03750 PF00849 RNA pseudouridylate synthase M5598_RS03750 PF01479 S4 domain M5598_RS03755 PF01713 Smr domain M5598_RS03775 PF00728 Glycosyl hydrolase family 20, catalytic domain M5598_RS03775 PF03173 Putative carbohydrate binding domain M5598_RS03775 PF02838 Glycosyl hydrolase family 20, domain 2 M5598_RS03775 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain M5598_RS03790 PF00403 Heavy-metal-associated domain M5598_RS03795 PF13609 Gram-negative porin M5598_RS03800 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M5598_RS03805 PF00749 tRNA synthetases class I (E and Q), catalytic domain M5598_RS03810 PF01389 OmpA-like transmembrane domain M5598_RS03810 PF00691 OmpA family M5598_RS03855 PF00072 Response regulator receiver domain M5598_RS03855 PF01584 CheW-like domain M5598_RS03860 PF03705 CheR methyltransferase, all-alpha domain M5598_RS03860 PF01739 CheR methyltransferase, SAM binding domain M5598_RS03865 PF00460 Flagella basal body rod protein M5598_RS03870 PF00460 Flagella basal body rod protein M5598_RS03870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS03875 PF03963 Flagellar hook capping protein - N-terminal region M5598_RS03875 PF13860 FlgD Ig-like domain M5598_RS03875 PF13861 FlgD Tudor-like domain M5598_RS03880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS03880 PF07559 Flagellar basal body protein FlaE M5598_RS03880 PF00460 Flagella basal body rod protein M5598_RS03885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS03885 PF00460 Flagella basal body rod protein M5598_RS03890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS03890 PF00460 Flagella basal body rod protein M5598_RS03895 PF02107 Flagellar L-ring protein M5598_RS03900 PF02119 Flagellar P-ring protein M5598_RS03905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M5598_RS03905 PF10135 Rod binding protein M5598_RS03910 PF07196 Flagellin hook IN motif M5598_RS03910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS03915 PF00669 Bacterial flagellin N-terminal helical region M5598_RS03920 PF00669 Bacterial flagellin N-terminal helical region M5598_RS03920 PF07196 Flagellin hook IN motif M5598_RS03920 PF00700 Bacterial flagellin C-terminal helical region M5598_RS03925 PF07196 Flagellin hook IN motif M5598_RS03925 PF00669 Bacterial flagellin N-terminal helical region M5598_RS03925 PF00700 Bacterial flagellin C-terminal helical region M5598_RS03930 PF00700 Bacterial flagellin C-terminal helical region M5598_RS03930 PF07196 Flagellin hook IN motif M5598_RS03930 PF00669 Bacterial flagellin N-terminal helical region M5598_RS03935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M5598_RS03940 PF05524 PEP-utilising enzyme, N-terminal M5598_RS03940 PF00391 PEP-utilising enzyme, mobile domain M5598_RS03940 PF02896 PEP-utilising enzyme, TIM barrel domain M5598_RS03945 PF00381 PTS HPr component phosphorylation site M5598_RS03950 PF00291 Pyridoxal-phosphate dependent enzyme M5598_RS03960 PF04354 ZipA, C-terminal FtsZ-binding domain M5598_RS03965 PF00533 BRCA1 C Terminus (BRCT) domain M5598_RS03965 PF01653 NAD-dependent DNA ligase adenylation domain M5598_RS03965 PF03120 NAD-dependent DNA ligase OB-fold domain M5598_RS03965 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M5598_RS03965 PF12826 Helix-hairpin-helix motif M5598_RS03970 PF03573 outer membrane porin, OprD family M5598_RS03985 PF16200 C-terminal region of band_7 M5598_RS03985 PF01145 SPFH domain / Band 7 family M5598_RS03990 PF11658 Cellulose biosynthesis protein BcsG M5598_RS04000 PF10995 Cellulose biosynthesis GIL M5598_RS04010 PF06564 Cellulose biosynthesis protein BcsQ M5598_RS04015 PF07238 PilZ domain M5598_RS04015 PF03552 Cellulose synthase M5598_RS04015 PF00535 Glycosyl transferase family 2 M5598_RS04020 PF03170 Bacterial cellulose synthase subunit M5598_RS04025 PF01270 Glycosyl hydrolases family 8 M5598_RS04030 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) M5598_RS04035 PF00085 Thioredoxin M5598_RS04040 PF00106 short chain dehydrogenase M5598_RS04045 PF01370 NAD dependent epimerase/dehydratase family M5598_RS04045 PF08338 Domain of unknown function (DUF1731) M5598_RS04050 PF07556 Protein of unknown function (DUF1538) M5598_RS04055 PF07556 Protein of unknown function (DUF1538) M5598_RS04075 PF12850 Calcineurin-like phosphoesterase superfamily domain M5598_RS04090 PF17323 Trans-membrane regulatory protein ToxS M5598_RS04095 PF00486 Transcriptional regulatory protein, C terminal M5598_RS04100 PF00183 Hsp90 protein M5598_RS04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS04105 PF05191 Adenylate kinase, active site lid M5598_RS04110 PF00762 Ferrochelatase M5598_RS04115 PF00854 POT family M5598_RS04120 PF02357 Transcription termination factor nusG M5598_RS04125 PF13537 Glutamine amidotransferase domain M5598_RS04125 PF00733 Asparagine synthase M5598_RS04130 PF02254 TrkA-N domain M5598_RS04130 PF00999 Sodium/hydrogen exchanger family M5598_RS04135 PF00480 ROK family M5598_RS04135 PF01047 MarR family M5598_RS04140 PF01979 Amidohydrolase family M5598_RS04145 PF02378 Phosphotransferase system, EIIC M5598_RS04145 PF00367 phosphotransferase system, EIIB M5598_RS04150 PF00749 tRNA synthetases class I (E and Q), catalytic domain M5598_RS04150 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M5598_RS04155 PF01475 Ferric uptake regulator family M5598_RS04165 PF00258 Flavodoxin M5598_RS04175 PF12697 Alpha/beta hydrolase family M5598_RS04180 PF03925 SeqA protein C-terminal domain M5598_RS04180 PF17206 SeqA protein N-terminal domain M5598_RS04185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M5598_RS04185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M5598_RS04185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M5598_RS04185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M5598_RS04195 PF01784 NIF3 (NGG1p interacting factor 3) M5598_RS04200 PF00285 Citrate synthase, C-terminal domain M5598_RS04205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M5598_RS04210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M5598_RS04215 PF00890 FAD binding domain M5598_RS04215 PF02910 Fumarate reductase flavoprotein C-term M5598_RS04220 PF13085 2Fe-2S iron-sulfur cluster binding domain M5598_RS04225 PF00676 Dehydrogenase E1 component M5598_RS04225 PF02779 Transketolase, pyrimidine binding domain M5598_RS04225 PF16078 2-oxoglutarate dehydrogenase N-terminus M5598_RS04225 PF16870 2-oxoglutarate dehydrogenase C-terminal M5598_RS04230 PF02817 e3 binding domain M5598_RS04230 PF00364 Biotin-requiring enzyme M5598_RS04230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M5598_RS04235 PF00549 CoA-ligase M5598_RS04235 PF08442 ATP-grasp domain M5598_RS04240 PF00549 CoA-ligase M5598_RS04240 PF02629 CoA binding domain M5598_RS04245 PF01610 Transposase M5598_RS04245 PF13542 Helix-turn-helix domain of transposase family ISL3 M5598_RS04245 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 M5598_RS04250 PF00551 Formyl transferase M5598_RS04255 PF00586 AIR synthase related protein, N-terminal domain M5598_RS04255 PF02769 AIR synthase related protein, C-terminal domain M5598_RS04265 PF00860 Permease family M5598_RS04280 PF03358 NADPH-dependent FMN reductase M5598_RS04285 PF03960 ArsC family M5598_RS04290 PF01435 Peptidase family M48 M5598_RS04290 PF13181 Tetratricopeptide repeat M5598_RS04300 PF01594 AI-2E family transporter M5598_RS04305 PF00578 AhpC/TSA family M5598_RS04310 PF01842 ACT domain M5598_RS04315 PF00701 Dihydrodipicolinate synthetase family M5598_RS04320 PF06804 NlpB/DapX lipoprotein M5598_RS04335 PF07687 Peptidase dimerisation domain M5598_RS04335 PF01546 Peptidase family M20/M25/M40 M5598_RS04340 PF03960 ArsC family M5598_RS04360 PF11143 Protein of unknown function (DUF2919) M5598_RS04365 PF04261 Dyp-type peroxidase family M5598_RS04370 PF07196 Flagellin hook IN motif M5598_RS04370 PF00669 Bacterial flagellin N-terminal helical region M5598_RS04370 PF00700 Bacterial flagellin C-terminal helical region M5598_RS04375 PF00700 Bacterial flagellin C-terminal helical region M5598_RS04375 PF00669 Bacterial flagellin N-terminal helical region M5598_RS04375 PF07196 Flagellin hook IN motif M5598_RS04380 PF00669 Bacterial flagellin N-terminal helical region M5598_RS04380 PF00700 Bacterial flagellin C-terminal helical region M5598_RS04380 PF07196 Flagellin hook IN motif M5598_RS04385 PF03646 FlaG protein M5598_RS04390 PF07196 Flagellin hook IN motif M5598_RS04390 PF07195 Flagellar hook-associated protein 2 C-terminus M5598_RS04390 PF02465 Flagellar hook-associated protein 2 N-terminus M5598_RS04400 PF02561 Flagellar protein FliS M5598_RS04405 PF06490 Flagellar regulatory protein FleQ M5598_RS04405 PF02954 Bacterial regulatory protein, Fis family M5598_RS04405 PF00158 Sigma-54 interaction domain M5598_RS04410 PF13188 PAS domain M5598_RS04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS04410 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS04415 PF02954 Bacterial regulatory protein, Fis family M5598_RS04415 PF00072 Response regulator receiver domain M5598_RS04415 PF00158 Sigma-54 interaction domain M5598_RS04420 PF02049 Flagellar hook-basal body complex protein FliE M5598_RS04425 PF01514 Secretory protein of YscJ/FliF family M5598_RS04425 PF08345 Flagellar M-ring protein C-terminal M5598_RS04430 PF14841 FliG middle domain M5598_RS04430 PF01706 FliG C-terminal domain M5598_RS04430 PF14842 FliG N-terminal domain M5598_RS04440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5598_RS04440 PF18269 T3SS EscN ATPase C-terminal domain M5598_RS04460 PF02154 Flagellar motor switch protein FliM M5598_RS04460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M5598_RS04465 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M5598_RS04470 PF04347 Flagellar biosynthesis protein, FliO M5598_RS04475 PF00813 FliP family M5598_RS04480 PF01313 Bacterial export proteins, family 3 M5598_RS04485 PF01311 Bacterial export proteins, family 1 M5598_RS04490 PF01312 FlhB HrpN YscU SpaS Family M5598_RS04495 PF00771 FHIPEP family M5598_RS04500 PF00448 SRP54-type protein, GTPase domain M5598_RS04505 PF10609 NUBPL iron-transfer P-loop NTPase M5598_RS04510 PF04545 Sigma-70, region 4 M5598_RS04510 PF04539 Sigma-70 region 3 M5598_RS04510 PF04542 Sigma-70 region 2 M5598_RS04515 PF00072 Response regulator receiver domain M5598_RS04520 PF04344 Chemotaxis phosphatase, CheZ M5598_RS04525 PF02895 Signal transducing histidine kinase, homodimeric domain M5598_RS04525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS04525 PF01627 Hpt domain M5598_RS04525 PF00072 Response regulator receiver domain M5598_RS04525 PF01584 CheW-like domain M5598_RS04530 PF01339 CheB methylesterase M5598_RS04530 PF00072 Response regulator receiver domain M5598_RS04535 PF13614 AAA domain M5598_RS04545 PF01584 CheW-like domain M5598_RS04555 PF00005 ABC transporter M5598_RS04560 PF03379 CcmB protein M5598_RS04565 PF01578 Cytochrome C assembly protein M5598_RS04570 PF04995 Heme exporter protein D (CcmD) M5598_RS04575 PF03100 CcmE M5598_RS04580 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M5598_RS04580 PF01578 Cytochrome C assembly protein M5598_RS04585 PF08534 Redoxin M5598_RS04590 PF03918 Cytochrome C biogenesis protein M5598_RS04600 PF04333 MlaA lipoprotein M5598_RS04605 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M5598_RS04610 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M5598_RS04620 PF04542 Sigma-70 region 2 M5598_RS04620 PF08281 Sigma-70, region 4 M5598_RS04625 PF00108 Thiolase, N-terminal domain M5598_RS04625 PF02803 Thiolase, C-terminal domain M5598_RS04630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M5598_RS04630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M5598_RS04630 PF00378 Enoyl-CoA hydratase/isomerase M5598_RS04640 PF00675 Insulinase (Peptidase family M16) M5598_RS04640 PF05193 Peptidase M16 inactive domain M5598_RS04640 PF16187 Middle or third domain of peptidase_M16 M5598_RS04645 PF00300 Histidine phosphatase superfamily (branch 1) M5598_RS04650 PF01713 Smr domain M5598_RS04655 PF05175 Methyltransferase small domain M5598_RS04660 PF01264 Chorismate synthase M5598_RS04665 PF03458 UPF0126 domain M5598_RS04670 PF04315 Elongation factor P hydroxylase M5598_RS04675 PF08891 YfcL protein M5598_RS04680 PF03358 NADPH-dependent FMN reductase M5598_RS04685 PF01266 FAD dependent oxidoreductase M5598_RS04685 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M5598_RS04690 PF00109 Beta-ketoacyl synthase, N-terminal domain M5598_RS04690 PF02801 Beta-ketoacyl synthase, C-terminal domain M5598_RS04695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M5598_RS04695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M5598_RS04695 PF11890 Domain of unknown function (DUF3410) M5598_RS04700 PF01118 Semialdehyde dehydrogenase, NAD binding domain M5598_RS04700 PF02774 Semialdehyde dehydrogenase, dimerisation domain M5598_RS04710 PF01416 tRNA pseudouridine synthase M5598_RS04715 PF17848 Acetyl-coA carboxylase zinc finger domain M5598_RS04715 PF01039 Carboxyl transferase domain M5598_RS04720 PF08245 Mur ligase middle domain M5598_RS04720 PF02875 Mur ligase family, glutamate ligase domain M5598_RS04725 PF05036 Sporulation related domain M5598_RS04730 PF02674 Colicin V production protein M5598_RS04735 PF00156 Phosphoribosyl transferase domain M5598_RS04740 PF03466 LysR substrate binding domain M5598_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS04745 PF00072 Response regulator receiver domain M5598_RS04755 PF04304 Protein of unknown function (DUF454) M5598_RS04760 PF00156 Phosphoribosyl transferase domain M5598_RS04765 PF12169 DNA polymerase III subunits gamma and tau domain III M5598_RS04765 PF12170 DNA polymerase III tau subunit V interacting with alpha M5598_RS04765 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M5598_RS04770 PF02575 YbaB/EbfC DNA-binding family M5598_RS04775 PF02132 RecR protein M5598_RS04775 PF13662 Toprim domain M5598_RS04780 PF00230 Major intrinsic protein M5598_RS04790 PF01042 Endoribonuclease L-PSP M5598_RS04795 PF03313 Serine dehydratase alpha chain M5598_RS04805 PF03692 Putative zinc- or iron-chelating domain M5598_RS04810 PF04226 Transglycosylase associated protein M5598_RS04815 PF03692 Putative zinc- or iron-chelating domain M5598_RS04820 PF00924 Mechanosensitive ion channel M5598_RS04820 PF05552 Conserved TM helix M5598_RS04825 PF03992 Antibiotic biosynthesis monooxygenase M5598_RS04830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5598_RS04840 PF00245 Alkaline phosphatase M5598_RS04855 PF13847 Methyltransferase domain M5598_RS04860 PF02743 Cache domain M5598_RS04860 PF00672 HAMP domain M5598_RS04860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS04865 PF01263 Aldose 1-epimerase M5598_RS04870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M5598_RS04870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M5598_RS04875 PF01641 SelR domain M5598_RS04885 PF07023 Protein of unknown function (DUF1315) M5598_RS04890 PF00710 Asparaginase, N-terminal M5598_RS04890 PF17763 Glutaminase/Asparaginase C-terminal domain M5598_RS04895 PF01343 Peptidase family S49 M5598_RS04900 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS04900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M5598_RS04905 PF00881 Nitroreductase family M5598_RS04910 PF01751 Toprim domain M5598_RS04910 PF01131 DNA topoisomerase M5598_RS04920 PF00106 short chain dehydrogenase M5598_RS04925 PF00850 Histone deacetylase domain M5598_RS04935 PF11893 Domain of unknown function (DUF3413) M5598_RS04935 PF00884 Sulfatase M5598_RS04940 PF07208 Protein of unknown function (DUF1414) M5598_RS04945 PF04245 37-kD nucleoid-associated bacterial protein M5598_RS04960 PF03553 Na+/H+ antiporter family M5598_RS04965 PF01118 Semialdehyde dehydrogenase, NAD binding domain M5598_RS04965 PF02774 Semialdehyde dehydrogenase, dimerisation domain M5598_RS04970 PF00027 Cyclic nucleotide-binding domain M5598_RS04970 PF00520 Ion transport protein M5598_RS04975 PF01914 MarC family integral membrane protein M5598_RS04980 PF00171 Aldehyde dehydrogenase family M5598_RS04980 PF00465 Iron-containing alcohol dehydrogenase M5598_RS04995 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M5598_RS04995 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M5598_RS05000 PF00462 Glutaredoxin M5598_RS05010 PF13726 Na+-H+ antiporter family M5598_RS05010 PF03553 Na+/H+ antiporter family M5598_RS05015 PF00929 Exonuclease M5598_RS05020 PF00691 OmpA family M5598_RS05020 PF18393 MotY N-terminal domain M5598_RS05025 PF10952 Protein of unknown function (DUF2753) M5598_RS05030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5598_RS05035 PF10576 Iron-sulfur binding domain of endonuclease III M5598_RS05035 PF00730 HhH-GPD superfamily base excision DNA repair protein M5598_RS05035 PF00633 Helix-hairpin-helix motif M5598_RS05040 PF02508 Rnf-Nqr subunit, membrane protein M5598_RS05045 PF04205 FMN-binding domain M5598_RS05050 PF03116 NQR2, RnfD, RnfE family M5598_RS05055 PF10531 SLBB domain M5598_RS05055 PF13375 RnfC Barrel sandwich hybrid domain M5598_RS05055 PF12838 4Fe-4S dicluster domain M5598_RS05055 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M5598_RS05060 PF04060 Putative Fe-S cluster M5598_RS05065 PF02508 Rnf-Nqr subunit, membrane protein M5598_RS05080 PF03372 Endonuclease/Exonuclease/phosphatase family M5598_RS05085 PF10689 Protein of unknown function (DUF2496) M5598_RS05090 PF07445 Primosomal replication protein priC M5598_RS05095 PF01925 Sulfite exporter TauE/SafE M5598_RS05100 PF13307 Helicase C-terminal domain M5598_RS05100 PF06733 DEAD_2 M5598_RS05110 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M5598_RS05115 PF00849 RNA pseudouridylate synthase M5598_RS05120 PF03971 Monomeric isocitrate dehydrogenase M5598_RS05125 PF00313 'Cold-shock' DNA-binding domain M5598_RS05130 PF02617 ATP-dependent Clp protease adaptor protein ClpS M5598_RS05135 PF00004 ATPase family associated with various cellular activities (AAA) M5598_RS05135 PF07724 AAA domain (Cdc48 subfamily) M5598_RS05135 PF17871 AAA lid domain M5598_RS05135 PF02861 Clp amino terminal domain, pathogenicity island component M5598_RS05135 PF10431 C-terminal, D2-small domain, of ClpB protein M5598_RS05145 PF01176 Translation initiation factor 1A / IF-1 M5598_RS05150 PF04376 Arginine-tRNA-protein transferase, N terminus M5598_RS05150 PF04377 Arginine-tRNA-protein transferase, C terminus M5598_RS05155 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M5598_RS05165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M5598_RS05170 PF10692 Protein of unknown function (DUF2498) M5598_RS05175 PF08272 Topoisomerase I zinc-ribbon-like M5598_RS05175 PF01131 DNA topoisomerase M5598_RS05175 PF01751 Toprim domain M5598_RS05175 PF01396 Topoisomerase DNA binding C4 zinc finger M5598_RS05180 PF00483 Nucleotidyl transferase M5598_RS05185 PF00534 Glycosyl transferases group 1 M5598_RS05185 PF08323 Starch synthase catalytic domain M5598_RS05205 PF04994 TfoX C-terminal domain M5598_RS05205 PF04993 TfoX N-terminal domain M5598_RS05210 PF00356 Bacterial regulatory proteins, lacI family M5598_RS05215 PF02613 Nitrate reductase delta subunit M5598_RS05220 PF00072 Response regulator receiver domain M5598_RS05220 PF00486 Transcriptional regulatory protein, C terminal M5598_RS05225 PF02698 DUF218 domain M5598_RS05230 PF13847 Methyltransferase domain M5598_RS05235 PF17192 MukF middle domain M5598_RS05235 PF17193 MukF C-terminal domain M5598_RS05235 PF03882 MukF winged-helix domain M5598_RS05240 PF04288 MukE-like family M5598_RS05245 PF04310 MukB N-terminal M5598_RS05245 PF16330 MukB hinge domain M5598_RS05255 PF08443 RimK-like ATP-grasp domain M5598_RS05255 PF18030 RimK PreATP-grasp domain M5598_RS05265 PF08443 RimK-like ATP-grasp domain M5598_RS05265 PF18030 RimK PreATP-grasp domain M5598_RS05270 PF08003 Protein of unknown function (DUF1698) M5598_RS05275 PF13649 Methyltransferase domain M5598_RS05280 PF01904 Protein of unknown function DUF72 M5598_RS05285 PF02938 GAD domain M5598_RS05285 PF00152 tRNA synthetases class II (D, K and N) M5598_RS05285 PF01336 OB-fold nucleic acid binding domain M5598_RS05290 PF02075 Crossover junction endodeoxyribonuclease RuvC M5598_RS05295 PF02203 Tar ligand binding domain homologue M5598_RS05295 PF00672 HAMP domain M5598_RS05295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS05300 PF07499 RuvA, C-terminal domain M5598_RS05300 PF01330 RuvA N terminal domain M5598_RS05305 PF17864 RuvB AAA lid domain M5598_RS05305 PF05491 RuvB C-terminal winged helix domain M5598_RS05305 PF05496 Holliday junction DNA helicase RuvB P-loop domain M5598_RS05310 PF01654 Cytochrome bd terminal oxidase subunit I M5598_RS05315 PF02322 Cytochrome bd terminal oxidase subunit II M5598_RS05320 PF08173 Membrane bound YbgT-like protein M5598_RS05330 PF03061 Thioesterase superfamily M5598_RS05335 PF01618 MotA/TolQ/ExbB proton channel family M5598_RS05340 PF02472 Biopolymer transport protein ExbD/TolR M5598_RS05350 PF07676 WD40-like Beta Propeller Repeat M5598_RS05350 PF04052 TolB amino-terminal domain M5598_RS05355 PF00691 OmpA family M5598_RS05360 PF13174 Tetratricopeptide repeat M5598_RS05360 PF16331 TolA binding protein trimerisation M5598_RS05365 PF01207 Dihydrouridine synthase (Dus) M5598_RS05370 PF03695 Uncharacterised protein family (UPF0149) M5598_RS05370 PF02810 SEC-C motif M5598_RS05375 PF02600 Disulfide bond formation protein DsbB M5598_RS05380 PF06450 Bacterial Na+/H+ antiporter B (NhaB) M5598_RS05385 PF07840 FadR C-terminal domain M5598_RS05385 PF00392 Bacterial regulatory proteins, gntR family M5598_RS05395 PF01588 Putative tRNA binding domain M5598_RS05395 PF09334 tRNA synthetases class I (M) M5598_RS05400 PF10609 NUBPL iron-transfer P-loop NTPase M5598_RS05405 PF00485 Phosphoribulokinase / Uridine kinase family M5598_RS05415 PF12557 Cob(I)alamin adenosyltransferase N terminal M5598_RS05415 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M5598_RS05420 PF01451 Low molecular weight phosphotyrosine protein phosphatase M5598_RS05425 PF00916 Sulfate permease family M5598_RS05425 PF01740 STAS domain M5598_RS05430 PF10150 Ribonuclease E/G family M5598_RS05430 PF12111 Polyribonucleotide phosphorylase C terminal M5598_RS05430 PF00575 S1 RNA binding domain M5598_RS05435 PF00849 RNA pseudouridylate synthase M5598_RS05435 PF01479 S4 domain M5598_RS05440 PF02545 Maf-like protein M5598_RS05445 PF02620 Large ribosomal RNA subunit accumulation protein YceD M5598_RS05450 PF01783 Ribosomal L32p protein family M5598_RS05455 PF02504 Fatty acid synthesis protein M5598_RS05460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M5598_RS05460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M5598_RS05465 PF00698 Acyl transferase domain M5598_RS05475 PF00550 Phosphopantetheine attachment site M5598_RS05480 PF00109 Beta-ketoacyl synthase, N-terminal domain M5598_RS05480 PF02801 Beta-ketoacyl synthase, C-terminal domain M5598_RS05485 PF01063 Amino-transferase class IV M5598_RS05490 PF02618 YceG-like family M5598_RS05495 PF02223 Thymidylate kinase M5598_RS05500 PF09115 DNA polymerase III, delta subunit, C terminal M5598_RS05505 PF01026 TatD related DNase M5598_RS05510 PF00367 phosphotransferase system, EIIB M5598_RS05510 PF02378 Phosphotransferase system, EIIC M5598_RS05525 PF00209 Sodium:neurotransmitter symporter family M5598_RS05540 PF01734 Patatin-like phospholipase M5598_RS05545 PF00224 Pyruvate kinase, barrel domain M5598_RS05545 PF02887 Pyruvate kinase, alpha/beta domain M5598_RS05550 PF00480 ROK family M5598_RS05555 PF01584 CheW-like domain M5598_RS05555 PF00072 Response regulator receiver domain M5598_RS05560 PF02811 PHP domain M5598_RS05560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M5598_RS05560 PF14579 Helix-hairpin-helix motif M5598_RS05560 PF07733 Bacterial DNA polymerase III alpha NTPase domain M5598_RS05560 PF01336 OB-fold nucleic acid binding domain M5598_RS05575 PF00106 short chain dehydrogenase M5598_RS05580 PF08496 Peptidase family S49 N-terminal M5598_RS05580 PF01343 Peptidase family S49 M5598_RS05585 PF02224 Cytidylate kinase M5598_RS05590 PF00575 S1 RNA binding domain M5598_RS05595 PF00216 Bacterial DNA-binding protein M5598_RS05600 PF06305 Lipopolysaccharide assembly protein A domain M5598_RS05605 PF18073 Rubredoxin metal binding domain M5598_RS05610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M5598_RS05615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS05625 PF01370 NAD dependent epimerase/dehydratase family M5598_RS05630 PF00535 Glycosyl transferase family 2 M5598_RS05640 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M5598_RS05650 PF02470 MlaD protein M5598_RS05655 PF04403 Paraquat-inducible protein A M5598_RS05660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M5598_RS05665 PF00034 Cytochrome c M5598_RS05670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M5598_RS05670 PF00384 Molybdopterin oxidoreductase M5598_RS05670 PF01568 Molydopterin dinucleotide binding domain M5598_RS05675 PF03916 Polysulphide reductase, NrfD M5598_RS05680 PF13247 4Fe-4S dicluster domain M5598_RS05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS05685 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS05690 PF00072 Response regulator receiver domain M5598_RS05690 PF00196 Bacterial regulatory proteins, luxR family M5598_RS05695 PF03466 LysR substrate binding domain M5598_RS05695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS05705 PF11412 Disulphide bond corrector protein DsbC M5598_RS05705 PF02683 Cytochrome C biogenesis protein transmembrane region M5598_RS05710 PF00085 Thioredoxin M5598_RS05730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS05740 PF00005 ABC transporter M5598_RS05740 PF02687 FtsX-like permease family M5598_RS05740 PF12704 MacB-like periplasmic core domain M5598_RS05745 PF02687 FtsX-like permease family M5598_RS05745 PF00005 ABC transporter M5598_RS05745 PF12704 MacB-like periplasmic core domain M5598_RS05750 PF12704 MacB-like periplasmic core domain M5598_RS05750 PF02687 FtsX-like permease family M5598_RS05750 PF00005 ABC transporter M5598_RS05755 PF00857 Isochorismatase family M5598_RS05760 PF02311 AraC-like ligand binding domain M5598_RS05760 PF12833 Helix-turn-helix domain M5598_RS05770 PF01717 Cobalamin-independent synthase, Catalytic domain M5598_RS05770 PF08267 Cobalamin-independent synthase, N-terminal domain M5598_RS05775 PF02698 DUF218 domain M5598_RS05800 PF01226 Formate/nitrite transporter M5598_RS05810 PF03649 Uncharacterised protein family (UPF0014) M5598_RS05815 PF06796 Periplasmic nitrate reductase protein NapE M5598_RS05820 PF03264 NapC/NirT cytochrome c family, N-terminal region M5598_RS05825 PF01568 Molydopterin dinucleotide binding domain M5598_RS05825 PF18364 Molybdopterin oxidoreductase N-terminal domain M5598_RS05825 PF00384 Molybdopterin oxidoreductase M5598_RS05830 PF16875 Glycosyl hydrolase family 36 N-terminal domain M5598_RS05830 PF16874 Glycosyl hydrolase family 36 C-terminal domain M5598_RS05840 PF02833 DHHA2 domain M5598_RS05840 PF01368 DHH family M5598_RS05850 PF00005 ABC transporter M5598_RS05855 PF00005 ABC transporter M5598_RS05855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS05860 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS05860 PF12911 N-terminal TM domain of oligopeptide transport permease C M5598_RS05865 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS05870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS05875 PF00158 Sigma-54 interaction domain M5598_RS05875 PF02954 Bacterial regulatory protein, Fis family M5598_RS05880 PF04012 PspA/IM30 family M5598_RS05885 PF06667 Phage shock protein B M5598_RS05890 PF04024 PspC domain M5598_RS05895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS05900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS05905 PF00873 AcrB/AcrD/AcrF family M5598_RS05910 PF03352 Methyladenine glycosylase M5598_RS05915 PF03280 Proteobacterial lipase chaperone protein M5598_RS05920 PF00561 alpha/beta hydrolase fold M5598_RS05925 PF01053 Cys/Met metabolism PLP-dependent enzyme M5598_RS05930 PF13396 Phospholipase_D-nuclease N-terminal M5598_RS05930 PF13091 PLD-like domain M5598_RS05935 PF00209 Sodium:neurotransmitter symporter family M5598_RS05940 PF12729 Four helix bundle sensory module for signal transduction M5598_RS05940 PF00672 HAMP domain M5598_RS05940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS05945 PF00849 RNA pseudouridylate synthase M5598_RS05955 PF00970 Oxidoreductase FAD-binding domain M5598_RS05955 PF00175 Oxidoreductase NAD-binding domain M5598_RS05955 PF00111 2Fe-2S iron-sulfur cluster binding domain M5598_RS05960 PF03063 Prismane/CO dehydrogenase family M5598_RS05965 PF01590 GAF domain M5598_RS05965 PF00158 Sigma-54 interaction domain M5598_RS05975 PF01066 CDP-alcohol phosphatidyltransferase M5598_RS05980 PF00005 ABC transporter M5598_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS05990 PF13416 Bacterial extracellular solute-binding protein M5598_RS05995 PF09335 SNARE associated Golgi protein M5598_RS06005 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS06005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M5598_RS06015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS06015 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS06020 PF00196 Bacterial regulatory proteins, luxR family M5598_RS06020 PF00072 Response regulator receiver domain M5598_RS06030 PF06945 Protein of unknown function (DUF1289) M5598_RS06040 PF00149 Calcineurin-like phosphoesterase M5598_RS06040 PF02872 5'-nucleotidase, C-terminal domain M5598_RS06060 PF01386 Ribosomal L25p family M5598_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS06070 PF00072 Response regulator receiver domain M5598_RS06070 PF00486 Transcriptional regulatory protein, C terminal M5598_RS06080 PF00271 Helicase conserved C-terminal domain M5598_RS06080 PF04851 Type III restriction enzyme, res subunit M5598_RS06085 PF00849 RNA pseudouridylate synthase M5598_RS06085 PF01479 S4 domain M5598_RS06090 PF07690 Major Facilitator Superfamily M5598_RS06100 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB M5598_RS06105 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) M5598_RS06120 PF03264 NapC/NirT cytochrome c family, N-terminal region M5598_RS06125 PF11066 Protein of unknown function (DUF2867) M5598_RS06125 PF13460 NAD(P)H-binding M5598_RS06130 PF01554 MatE M5598_RS06135 PF00005 ABC transporter M5598_RS06150 PF06965 Na+/H+ antiporter 1 M5598_RS06155 PF16295 Tetracyclin repressor-like, C-terminal domain M5598_RS06155 PF00440 Bacterial regulatory proteins, tetR family M5598_RS06160 PF09317 Domain of unknown function (DUF1974) M5598_RS06160 PF02770 Acyl-CoA dehydrogenase, middle domain M5598_RS06160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5598_RS06160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5598_RS06165 PF12241 Trans-2-enoyl-CoA reductase catalytic region M5598_RS06165 PF07055 Enoyl reductase FAD binding domain M5598_RS06165 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M5598_RS06170 PF06826 Predicted Permease Membrane Region M5598_RS06170 PF02080 TrkA-C domain M5598_RS06175 PF00462 Glutaredoxin M5598_RS06180 PF00465 Iron-containing alcohol dehydrogenase M5598_RS06185 PF01418 Helix-turn-helix domain, rpiR family M5598_RS06185 PF01380 SIS domain M5598_RS06190 PF00282 Pyridoxal-dependent decarboxylase conserved domain M5598_RS06200 PF03956 Lysine exporter LysO M5598_RS06210 PF04994 TfoX C-terminal domain M5598_RS06210 PF04993 TfoX N-terminal domain M5598_RS06225 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS06225 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS06225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS06235 PF00266 Aminotransferase class-V M5598_RS06240 PF00291 Pyridoxal-phosphate dependent enzyme M5598_RS06245 PF00664 ABC transporter transmembrane region M5598_RS06245 PF00005 ABC transporter M5598_RS06250 PF00664 ABC transporter transmembrane region M5598_RS06250 PF00005 ABC transporter M5598_RS06255 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS06265 PF00266 Aminotransferase class-V M5598_RS06275 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS06275 PF00072 Response regulator receiver domain M5598_RS06280 PF00939 Sodium:sulfate symporter transmembrane region M5598_RS06285 PF02698 DUF218 domain M5598_RS06290 PF00390 Malic enzyme, N-terminal domain M5598_RS06290 PF03949 Malic enzyme, NAD binding domain M5598_RS06295 PF00270 DEAD/DEAH box helicase M5598_RS06295 PF08482 ATP-dependent helicase C-terminal M5598_RS06295 PF04408 Helicase associated domain (HA2) M5598_RS06295 PF00271 Helicase conserved C-terminal domain M5598_RS06300 PF02253 Phospholipase A1 M5598_RS06310 PF09423 PhoD-like phosphatase M5598_RS06310 PF16655 PhoD-like phosphatase, N-terminal domain M5598_RS06315 PF01259 SAICAR synthetase M5598_RS06335 PF00691 OmpA family M5598_RS06335 PF05736 OprF membrane domain M5598_RS06350 PF02913 FAD linked oxidases, C-terminal domain M5598_RS06350 PF01565 FAD binding domain M5598_RS06350 PF13183 4Fe-4S dicluster domain M5598_RS06355 PF04191 Phospholipid methyltransferase M5598_RS06365 PF00221 Aromatic amino acid lyase M5598_RS06370 PF01175 Urocanase Rossmann-like domain M5598_RS06370 PF17392 Urocanase C-terminal domain M5598_RS06370 PF17391 Urocanase N-terminal domain M5598_RS06375 PF00491 Arginase family M5598_RS06380 PF01979 Amidohydrolase family M5598_RS06385 PF00392 Bacterial regulatory proteins, gntR family M5598_RS06385 PF07702 UTRA domain M5598_RS06400 PF03129 Anticodon binding domain M5598_RS06400 PF02824 TGS domain M5598_RS06400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M5598_RS06400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M5598_RS06405 PF00707 Translation initiation factor IF-3, C-terminal domain M5598_RS06405 PF05198 Translation initiation factor IF-3, N-terminal domain M5598_RS06410 PF01632 Ribosomal protein L35 M5598_RS06415 PF00453 Ribosomal protein L20 M5598_RS06420 PF01906 Putative heavy-metal-binding M5598_RS06450 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS06450 PF17158 Membrane-associated sensor, integral membrane domain M5598_RS06455 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M5598_RS06455 PF01409 tRNA synthetases class II core domain (F) M5598_RS06460 PF03483 B3/4 domain M5598_RS06460 PF03484 tRNA synthetase B5 domain M5598_RS06460 PF03147 Ferredoxin-fold anticodon binding domain M5598_RS06460 PF01588 Putative tRNA binding domain M5598_RS06460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M5598_RS06470 PF00216 Bacterial DNA-binding protein M5598_RS06480 PF05724 Thiopurine S-methyltransferase (TPMT) M5598_RS06485 PF02222 ATP-grasp domain M5598_RS06490 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region M5598_RS06490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5598_RS06495 PF04172 LrgB-like family M5598_RS06500 PF03788 LrgA family M5598_RS06505 PF00929 Exonuclease M5598_RS06505 PF08411 Exonuclease C-terminal M5598_RS06510 PF00375 Sodium:dicarboxylate symporter family M5598_RS06515 PF13460 NAD(P)H-binding M5598_RS06520 PF02277 Phosphoribosyltransferase M5598_RS06525 PF02654 Cobalamin-5-phosphate synthase M5598_RS06530 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M5598_RS06535 PF00300 Histidine phosphatase superfamily (branch 1) M5598_RS06545 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M5598_RS06550 PF01032 FecCD transport family M5598_RS06555 PF00005 ABC transporter M5598_RS06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS06575 PF03466 LysR substrate binding domain M5598_RS06595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M5598_RS06600 PF16363 GDP-mannose 4,6 dehydratase M5598_RS06605 PF04991 LicD family M5598_RS06610 PF01863 Protein of unknown function DUF45 M5598_RS06615 PF05971 RNA methyltransferase M5598_RS06635 PF00392 Bacterial regulatory proteins, gntR family M5598_RS06640 PF00171 Aldehyde dehydrogenase family M5598_RS06645 PF05544 Proline racemase M5598_RS06660 PF02423 Ornithine cyclodeaminase/mu-crystallin family M5598_RS06665 PF00701 Dihydrodipicolinate synthetase family M5598_RS06670 PF00005 ABC transporter M5598_RS06670 PF08402 TOBE domain M5598_RS06675 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS06680 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS06690 PF01752 Collagenase M5598_RS06690 PF08453 Peptidase family M9 N-terminal M5598_RS06700 PF00005 ABC transporter M5598_RS06700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS06705 PF00005 ABC transporter M5598_RS06705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS06710 PF12911 N-terminal TM domain of oligopeptide transport permease C M5598_RS06710 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS06715 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS06720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS06725 PF07687 Peptidase dimerisation domain M5598_RS06725 PF01546 Peptidase family M20/M25/M40 M5598_RS06730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5598_RS06735 PF04209 homogentisate 1,2-dioxygenase M5598_RS06745 PF14497 Glutathione S-transferase, C-terminal domain M5598_RS06745 PF02798 Glutathione S-transferase, N-terminal domain M5598_RS06785 PF01810 LysE type translocator M5598_RS06790 PF13302 Acetyltransferase (GNAT) domain M5598_RS06810 PF03553 Na+/H+ antiporter family M5598_RS06815 PF00120 Glutamine synthetase, catalytic domain M5598_RS06820 PF07722 Peptidase C26 M5598_RS06825 PF01381 Helix-turn-helix M5598_RS06825 PF07883 Cupin domain M5598_RS06830 PF00171 Aldehyde dehydrogenase family M5598_RS06835 PF01266 FAD dependent oxidoreductase M5598_RS06840 PF00795 Carbon-nitrogen hydrolase M5598_RS06845 PF04371 Porphyromonas-type peptidyl-arginine deiminase M5598_RS06850 PF00171 Aldehyde dehydrogenase family M5598_RS06855 PF00202 Aminotransferase class-III M5598_RS06860 PF02833 DHHA2 domain M5598_RS06860 PF01368 DHH family M5598_RS06865 PF00196 Bacterial regulatory proteins, luxR family M5598_RS06865 PF00563 EAL domain M5598_RS06880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS06885 PF00873 AcrB/AcrD/AcrF family M5598_RS06900 PF02423 Ornithine cyclodeaminase/mu-crystallin family M5598_RS06905 PF01168 Alanine racemase, N-terminal domain M5598_RS06905 PF14031 Putative serine dehydratase domain M5598_RS06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS06910 PF03466 LysR substrate binding domain M5598_RS06920 PF02272 DHHA1 domain M5598_RS06920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M5598_RS06920 PF01411 tRNA synthetases class II (A) M5598_RS06925 PF12833 Helix-turn-helix domain M5598_RS06935 PF01047 MarR family M5598_RS06940 PF04237 YjbR M5598_RS06960 PF00132 Bacterial transferase hexapeptide (six repeats) M5598_RS06960 PF12464 Maltose acetyltransferase M5598_RS06975 PF00672 HAMP domain M5598_RS06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS06975 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS06975 PF01627 Hpt domain M5598_RS06975 PF00072 Response regulator receiver domain M5598_RS06975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M5598_RS06980 PF00563 EAL domain M5598_RS06980 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS06980 PF03707 Bacterial signalling protein N terminal repeat M5598_RS06995 PF04204 Homoserine O-succinyltransferase M5598_RS07005 PF13520 Amino acid permease M5598_RS07010 PF03279 Bacterial lipid A biosynthesis acyltransferase M5598_RS07015 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M5598_RS07020 PF01810 LysE type translocator M5598_RS07030 PF01235 Sodium:alanine symporter family M5598_RS07055 PF00884 Sulfatase M5598_RS07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS07060 PF08521 Two-component sensor kinase N-terminal M5598_RS07060 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS07065 PF00072 Response regulator receiver domain M5598_RS07065 PF00486 Transcriptional regulatory protein, C terminal M5598_RS07085 PF00501 AMP-binding enzyme M5598_RS07095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M5598_RS07100 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS07105 PF00005 ABC transporter M5598_RS07105 PF00571 CBS domain M5598_RS07120 PF02028 BCCT, betaine/carnitine/choline family transporter M5598_RS07125 PF00583 Acetyltransferase (GNAT) family M5598_RS07130 PF00202 Aminotransferase class-III M5598_RS07135 PF06339 Ectoine synthase M5598_RS07140 PF00696 Amino acid kinase family M5598_RS07140 PF13840 ACT domain M5598_RS07160 PF00034 Cytochrome c M5598_RS07160 PF03150 Di-haem cytochrome c peroxidase M5598_RS07175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS07190 PF00989 PAS fold M5598_RS07190 PF17203 Single cache domain 3 M5598_RS07190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M5598_RS07195 PF00072 Response regulator receiver domain M5598_RS07195 PF12431 Transcriptional regulator M5598_RS07200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M5598_RS07200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M5598_RS07205 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M5598_RS07210 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M5598_RS07210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M5598_RS07230 PF00158 Sigma-54 interaction domain M5598_RS07230 PF01590 GAF domain M5598_RS07230 PF02954 Bacterial regulatory protein, Fis family M5598_RS07235 PF00171 Aldehyde dehydrogenase family M5598_RS07255 PF12833 Helix-turn-helix domain M5598_RS07270 PF00263 Bacterial type II and III secretion system protein M5598_RS07270 PF03958 Bacterial type II/III secretion system short domain M5598_RS07275 PF16693 Inner membrane component of T3SS, periplasmic domain M5598_RS07275 PF16697 Inner membrane component of T3SS, cytoplasmic domain M5598_RS07285 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF M5598_RS07290 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) M5598_RS07300 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI M5598_RS07305 PF01514 Secretory protein of YscJ/FliF family M5598_RS07315 PF02108 Flagellar assembly protein FliH M5598_RS07325 PF02661 Fic/DOC family M5598_RS07350 PF01312 FlhB HrpN YscU SpaS Family M5598_RS07355 PF01311 Bacterial export proteins, family 1 M5598_RS07360 PF01313 Bacterial export proteins, family 3 M5598_RS07365 PF00813 FliP family M5598_RS07370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M5598_RS07385 PF02874 ATP synthase alpha/beta family, beta-barrel domain M5598_RS07385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5598_RS07385 PF18269 T3SS EscN ATPase C-terminal domain M5598_RS07390 PF07201 HrpJ-like domain M5598_RS07395 PF09059 TyeA M5598_RS07415 PF00771 FHIPEP family M5598_RS07420 PF09621 Type III secretion system regulator (LcrR) M5598_RS07425 PF07216 LcrG protein M5598_RS07430 PF04792 V antigen (LcrV) protein M5598_RS07435 PF07720 Tetratricopeptide repeat M5598_RS07445 PF05844 YopD protein M5598_RS07455 PF01925 Sulfite exporter TauE/SafE M5598_RS07460 PF01970 Tripartite tricarboxylate transporter TctA family M5598_RS07490 PF00285 Citrate synthase, C-terminal domain M5598_RS07495 PF00330 Aconitase family (aconitate hydratase) M5598_RS07495 PF00694 Aconitase C-terminal domain M5598_RS07500 PF04303 PrpF protein M5598_RS07505 PF16177 Acetyl-coenzyme A synthetase N-terminus M5598_RS07505 PF13193 AMP-binding enzyme C-terminal domain M5598_RS07505 PF00501 AMP-binding enzyme M5598_RS07510 PF00583 Acetyltransferase (GNAT) family M5598_RS07515 PF00089 Trypsin M5598_RS07530 PF04055 Radical SAM superfamily M5598_RS07535 PF06508 Queuosine biosynthesis protein QueC M5598_RS07540 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS07540 PF17158 Membrane-associated sensor, integral membrane domain M5598_RS07550 PF05736 OprF membrane domain M5598_RS07550 PF00691 OmpA family M5598_RS07570 PF00691 OmpA family M5598_RS07570 PF05736 OprF membrane domain M5598_RS07585 PF17785 PUA-like domain M5598_RS07585 PF10672 S-adenosylmethionine-dependent methyltransferase M5598_RS07590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS07590 PF00672 HAMP domain M5598_RS07590 PF02743 Cache domain M5598_RS07595 PF00708 Acylphosphatase M5598_RS07600 PF04358 DsrC like protein M5598_RS07610 PF01027 Inhibitor of apoptosis-promoting Bax1 M5598_RS07615 PF00005 ABC transporter M5598_RS07620 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS07630 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS07635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M5598_RS07635 PF14824 Sirohaem biosynthesis protein central M5598_RS07635 PF10414 Sirohaem synthase dimerisation region M5598_RS07640 PF04461 Protein of unknown function (DUF520) M5598_RS07645 PF00793 DAHP synthetase I family M5598_RS07665 PF01189 16S rRNA methyltransferase RsmB/F M5598_RS07665 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF M5598_RS07665 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF M5598_RS07670 PF02470 MlaD protein M5598_RS07675 PF04403 Paraquat-inducible protein A M5598_RS07680 PF00005 ABC transporter M5598_RS07680 PF00664 ABC transporter transmembrane region M5598_RS07685 PF13185 GAF domain M5598_RS07690 PF04352 ProQ/FINO family M5598_RS07690 PF17516 ProQ C-terminal domain M5598_RS07695 PF11818 C-terminal domain of tail specific protease (DUF3340) M5598_RS07695 PF00595 PDZ domain M5598_RS07695 PF03572 Peptidase family S41 M5598_RS07695 PF17804 Tail specific protease N-terminal domain M5598_RS07705 PF11940 Domain of unknown function (DUF3458) Ig-like fold M5598_RS07705 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M5598_RS07705 PF01433 Peptidase family M1 domain M5598_RS07715 PF05088 Bacterial NAD-glutamate dehydrogenase M5598_RS07720 PF01180 Dihydroorotate dehydrogenase M5598_RS07725 PF07126 Cell-division protein ZapC M5598_RS07730 PF01170 Putative RNA methylase family UPF0020 M5598_RS07730 PF10672 S-adenosylmethionine-dependent methyltransferase M5598_RS07730 PF02926 THUMP domain M5598_RS07740 PF16326 ABC transporter C-terminal domain M5598_RS07740 PF00005 ABC transporter M5598_RS07740 PF12848 ABC transporter M5598_RS07750 PF04957 Ribosome modulation factor M5598_RS07755 PF07977 FabA-like domain M5598_RS07760 PF13654 AAA domain M5598_RS07760 PF05362 Lon protease (S16) C-terminal proteolytic domain M5598_RS07765 PF06303 MatP N-terminal domain M5598_RS07765 PF17414 MatP C-terminal ribbon-helix-helix domain M5598_RS07785 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS07785 PF09308 LuxQ, periplasmic M5598_RS07785 PF00072 Response regulator receiver domain M5598_RS07800 PF00115 Cytochrome C and Quinol oxidase polypeptide I M5598_RS07815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M5598_RS07815 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP M5598_RS07825 PF00403 Heavy-metal-associated domain M5598_RS07840 PF00027 Cyclic nucleotide-binding domain M5598_RS07840 PF13545 Crp-like helix-turn-helix domain M5598_RS07845 PF00582 Universal stress protein family M5598_RS07850 PF01171 PP-loop family M5598_RS07870 PF00005 ABC transporter M5598_RS07870 PF08402 TOBE domain M5598_RS07875 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS07880 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS07885 PF13416 Bacterial extracellular solute-binding protein M5598_RS07890 PF13416 Bacterial extracellular solute-binding protein M5598_RS07895 PF02146 Sir2 family M5598_RS07905 PF00909 Ammonium Transporter Family M5598_RS07945 PF05593 RHS Repeat M5598_RS07945 PF03527 RHS protein M5598_RS07960 PF13247 4Fe-4S dicluster domain M5598_RS07965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M5598_RS07965 PF01568 Molydopterin dinucleotide binding domain M5598_RS07965 PF00384 Molybdopterin oxidoreductase M5598_RS07975 PF02613 Nitrate reductase delta subunit M5598_RS07995 PF02634 FdhD/NarQ family M5598_RS08000 PF00005 ABC transporter M5598_RS08000 PF12848 ABC transporter M5598_RS08005 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS08005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS08010 PF02954 Bacterial regulatory protein, Fis family M5598_RS08010 PF00072 Response regulator receiver domain M5598_RS08010 PF00158 Sigma-54 interaction domain M5598_RS08015 PF12849 PBP superfamily domain M5598_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS08025 PF08402 TOBE domain M5598_RS08025 PF00005 ABC transporter M5598_RS08030 PF12804 MobA-like NTP transferase domain M5598_RS08035 PF03454 MoeA C-terminal region (domain IV) M5598_RS08035 PF03453 MoeA N-terminal region (domain I and II) M5598_RS08035 PF00994 Probable molybdopterin binding domain M5598_RS08045 PF00534 Glycosyl transferases group 1 M5598_RS08045 PF13439 Glycosyltransferase Family 4 M5598_RS08050 PF00535 Glycosyl transferase family 2 M5598_RS08055 PF02397 Bacterial sugar transferase M5598_RS08065 PF02028 BCCT, betaine/carnitine/choline family transporter M5598_RS08080 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M5598_RS08080 PF11898 Domain of unknown function (DUF3418) M5598_RS08080 PF04408 Helicase associated domain (HA2) M5598_RS08080 PF00271 Helicase conserved C-terminal domain M5598_RS08080 PF00270 DEAD/DEAH box helicase M5598_RS08085 PF02525 Flavodoxin-like fold M5598_RS08095 PF02613 Nitrate reductase delta subunit M5598_RS08100 PF04976 DMSO reductase anchor subunit (DmsC) M5598_RS08105 PF13247 4Fe-4S dicluster domain M5598_RS08105 PF12800 4Fe-4S binding domain M5598_RS08110 PF01568 Molydopterin dinucleotide binding domain M5598_RS08110 PF00384 Molybdopterin oxidoreductase M5598_RS08110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M5598_RS08140 PF17158 Membrane-associated sensor, integral membrane domain M5598_RS08140 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS08150 PF00012 Hsp70 protein M5598_RS08155 PF00012 Hsp70 protein M5598_RS08180 PF00664 ABC transporter transmembrane region M5598_RS08180 PF00005 ABC transporter M5598_RS08185 PF00664 ABC transporter transmembrane region M5598_RS08185 PF00005 ABC transporter M5598_RS08205 PF03222 Tryptophan/tyrosine permease family M5598_RS08210 PF00465 Iron-containing alcohol dehydrogenase M5598_RS08215 PF01966 HD domain M5598_RS08225 PF03741 Integral membrane protein TerC family M5598_RS08235 PF04055 Radical SAM superfamily M5598_RS08240 PF11230 Protein of unknown function (DUF3029) M5598_RS08245 PF01810 LysE type translocator M5598_RS08250 PF01966 HD domain M5598_RS08250 PF11871 Domain of unknown function (DUF3391) M5598_RS08255 PF03707 Bacterial signalling protein N terminal repeat M5598_RS08255 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS08255 PF00563 EAL domain M5598_RS08260 PF00072 Response regulator receiver domain M5598_RS08260 PF02954 Bacterial regulatory protein, Fis family M5598_RS08260 PF00158 Sigma-54 interaction domain M5598_RS08265 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS08265 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS08270 PF00939 Sodium:sulfate symporter transmembrane region M5598_RS08275 PF00583 Acetyltransferase (GNAT) family M5598_RS08285 PF00300 Histidine phosphatase superfamily (branch 1) M5598_RS08300 PF00480 ROK family M5598_RS08305 PF03942 DTW domain M5598_RS08340 PF00672 HAMP domain M5598_RS08340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS08340 PF17202 Single cache domain 3 M5598_RS08345 PF00877 NlpC/P60 family M5598_RS08355 PF05230 MASE2 domain M5598_RS08355 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS08360 PF00072 Response regulator receiver domain M5598_RS08360 PF01339 CheB methylesterase M5598_RS08365 PF03881 Fructosamine kinase M5598_RS08375 PF00677 Lumazine binding domain M5598_RS08380 PF01554 MatE M5598_RS08390 PF01068 ATP dependent DNA ligase domain M5598_RS08390 PF14743 DNA ligase OB-like domain M5598_RS08395 PF01740 STAS domain M5598_RS08405 PF02563 Polysaccharide biosynthesis/export protein M5598_RS08405 PF10531 SLBB domain M5598_RS08420 PF02954 Bacterial regulatory protein, Fis family M5598_RS08420 PF00072 Response regulator receiver domain M5598_RS08420 PF00158 Sigma-54 interaction domain M5598_RS08425 PF00534 Glycosyl transferases group 1 M5598_RS08425 PF13439 Glycosyltransferase Family 4 M5598_RS08430 PF13439 Glycosyltransferase Family 4 M5598_RS08430 PF00534 Glycosyl transferases group 1 M5598_RS08475 PF01321 Creatinase/Prolidase N-terminal domain M5598_RS08475 PF00557 Metallopeptidase family M24 M5598_RS08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS08485 PF03466 LysR substrate binding domain M5598_RS08500 PF08543 Phosphomethylpyrimidine kinase M5598_RS08505 PF00155 Aminotransferase class I and II M5598_RS08510 PF02080 TrkA-C domain M5598_RS08510 PF06826 Predicted Permease Membrane Region M5598_RS08520 PF13533 Biotin-lipoyl like M5598_RS08535 PF00135 Carboxylesterase family M5598_RS08540 PF13091 PLD-like domain M5598_RS08545 PF01103 Surface antigen M5598_RS08545 PF17243 POTRA domain TamA domain 1 M5598_RS08645 PF00465 Iron-containing alcohol dehydrogenase M5598_RS08650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M5598_RS08650 PF00356 Bacterial regulatory proteins, lacI family M5598_RS08665 PF00392 Bacterial regulatory proteins, gntR family M5598_RS08665 PF07702 UTRA domain M5598_RS08670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5598_RS08670 PF02378 Phosphotransferase system, EIIC M5598_RS08670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5598_RS08675 PF01074 Glycosyl hydrolases family 38 N-terminal domain M5598_RS08675 PF07748 Glycosyl hydrolases family 38 C-terminal domain M5598_RS08675 PF09261 Alpha mannosidase middle domain M5598_RS08680 PF02595 Glycerate kinase family M5598_RS08685 PF01238 Phosphomannose isomerase type I M5598_RS08690 PF00356 Bacterial regulatory proteins, lacI family M5598_RS08700 PF16875 Glycosyl hydrolase family 36 N-terminal domain M5598_RS08700 PF16874 Glycosyl hydrolase family 36 C-terminal domain M5598_RS08705 PF02264 LamB porin M5598_RS08715 PF02929 Beta galactosidase small chain M5598_RS08715 PF16353 Domain of unknown function(DUF4981) M5598_RS08715 PF00703 Glycosyl hydrolases family 2 M5598_RS08715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M5598_RS08715 PF02837 Glycosyl hydrolases family 2, sugar binding domain M5598_RS08720 PF00356 Bacterial regulatory proteins, lacI family M5598_RS08725 PF00356 Bacterial regulatory proteins, lacI family M5598_RS08730 PF01263 Aldose 1-epimerase M5598_RS08735 PF00288 GHMP kinases N terminal domain M5598_RS08735 PF08544 GHMP kinases C terminal M5598_RS08735 PF10509 Galactokinase galactose-binding signature M5598_RS08785 PF13508 Acetyltransferase (GNAT) domain M5598_RS08855 PF17676 LD-carboxypeptidase C-terminal domain M5598_RS08855 PF02016 LD-carboxypeptidase N-terminal domain M5598_RS09015 PF04463 Protein of unknown function (DUF523) M5598_RS09235 PF01810 LysE type translocator M5598_RS09605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5598_RS09670 PF01610 Transposase M5598_RS09670 PF13542 Helix-turn-helix domain of transposase family ISL3 M5598_RS09670 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 M5598_RS09710 PF00589 Phage integrase family M5598_RS09710 PF13495 Phage integrase, N-terminal SAM-like domain M5598_RS09725 PF13302 Acetyltransferase (GNAT) domain M5598_RS09730 PF18024 Helix-turn-helix domain M5598_RS09730 PF00158 Sigma-54 interaction domain M5598_RS09735 PF05128 Domain of unknown function (DUF697) M5598_RS09740 PF04317 YcjX-like family, DUF463 M5598_RS09755 PF04715 Anthranilate synthase component I, N terminal region M5598_RS09755 PF00425 chorismate binding enzyme M5598_RS09760 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS09760 PF09308 LuxQ, periplasmic M5598_RS09760 PF00072 Response regulator receiver domain M5598_RS09770 PF00293 NUDIX domain M5598_RS09775 PF03222 Tryptophan/tyrosine permease family M5598_RS09780 PF03315 Serine dehydratase beta chain M5598_RS09780 PF03313 Serine dehydratase alpha chain M5598_RS09785 PF04940 Sensors of blue-light using FAD M5598_RS09785 PF00563 EAL domain M5598_RS09795 PF01242 6-pyruvoyl tetrahydropterin synthase M5598_RS09805 PF00313 'Cold-shock' DNA-binding domain M5598_RS09810 PF17876 Cold shock domain M5598_RS09810 PF08461 Ribonuclease R winged-helix domain M5598_RS09810 PF08206 Ribonuclease B OB domain M5598_RS09810 PF00773 RNB domain M5598_RS09810 PF00575 S1 RNA binding domain M5598_RS09830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS09830 PF02743 Cache domain M5598_RS09830 PF00672 HAMP domain M5598_RS09835 PF00152 tRNA synthetases class II (D, K and N) M5598_RS09835 PF01336 OB-fold nucleic acid binding domain M5598_RS09845 PF00155 Aminotransferase class I and II M5598_RS09845 PF00392 Bacterial regulatory proteins, gntR family M5598_RS09860 PF00155 Aminotransferase class I and II M5598_RS09880 PF00672 HAMP domain M5598_RS09880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS09885 PF02028 BCCT, betaine/carnitine/choline family transporter M5598_RS09890 PF01047 MarR family M5598_RS09895 PF00072 Response regulator receiver domain M5598_RS09895 PF00196 Bacterial regulatory proteins, luxR family M5598_RS09900 PF17200 Single Cache domain 2 M5598_RS09900 PF07730 Histidine kinase M5598_RS09905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M5598_RS09915 PF03480 Bacterial extracellular solute-binding protein, family 7 M5598_RS09930 PF00753 Metallo-beta-lactamase superfamily M5598_RS09935 PF05951 Bacterial protein of unknown function (DUF882) M5598_RS09940 PF01471 Putative peptidoglycan binding domain M5598_RS09940 PF03734 L,D-transpeptidase catalytic domain M5598_RS09965 PF00925 GTP cyclohydrolase II M5598_RS09975 PF03918 Cytochrome C biogenesis protein M5598_RS09980 PF08534 Redoxin M5598_RS09985 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M5598_RS09985 PF01578 Cytochrome C assembly protein M5598_RS09990 PF03916 Polysulphide reductase, NrfD M5598_RS09995 PF13247 4Fe-4S dicluster domain M5598_RS10005 PF02335 Cytochrome c552 M5598_RS10020 PF03989 DNA gyrase C-terminal domain, beta-propeller M5598_RS10020 PF00521 DNA gyrase/topoisomerase IV, subunit A M5598_RS10030 PF03477 ATP cone domain M5598_RS10030 PF02867 Ribonucleotide reductase, barrel domain M5598_RS10030 PF00317 Ribonucleotide reductase, all-alpha domain M5598_RS10035 PF00268 Ribonucleotide reductase, small chain M5598_RS10045 PF00994 Probable molybdopterin binding domain M5598_RS10060 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M5598_RS10065 PF16653 Saccharopine dehydrogenase C-terminal domain M5598_RS10065 PF03435 Saccharopine dehydrogenase NADP binding domain M5598_RS10070 PF00202 Aminotransferase class-III M5598_RS10095 PF01066 CDP-alcohol phosphatidyltransferase M5598_RS10100 PF01541 GIY-YIG catalytic domain M5598_RS10100 PF02151 UvrB/uvrC motif M5598_RS10100 PF08459 UvrC Helix-hairpin-helix N-terminal M5598_RS10105 PF00072 Response regulator receiver domain M5598_RS10105 PF00196 Bacterial regulatory proteins, luxR family M5598_RS10110 PF00136 DNA polymerase family B M5598_RS10110 PF03104 DNA polymerase family B, exonuclease domain M5598_RS10120 PF01132 Elongation factor P (EF-P) OB domain M5598_RS10120 PF09285 Elongation factor P, C-terminal M5598_RS10120 PF08207 Elongation factor P (EF-P) KOW-like domain M5598_RS10125 PF04269 Protein of unknown function, DUF440 M5598_RS10130 PF00849 RNA pseudouridylate synthase M5598_RS10130 PF01479 S4 domain M5598_RS10140 PF01300 Telomere recombination M5598_RS10145 PF02811 PHP domain M5598_RS10150 PF08056 Tryptophan operon leader peptide M5598_RS10155 PF04715 Anthranilate synthase component I, N terminal region M5598_RS10155 PF00425 chorismate binding enzyme M5598_RS10160 PF00117 Glutamine amidotransferase class-I M5598_RS10165 PF00591 Glycosyl transferase family, a/b domain M5598_RS10165 PF02885 Glycosyl transferase family, helical bundle domain M5598_RS10170 PF00218 Indole-3-glycerol phosphate synthase M5598_RS10170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M5598_RS10175 PF00291 Pyridoxal-phosphate dependent enzyme M5598_RS10180 PF00290 Tryptophan synthase alpha chain M5598_RS10185 PF00027 Cyclic nucleotide-binding domain M5598_RS10185 PF13545 Crp-like helix-turn-helix domain M5598_RS10190 PF13193 AMP-binding enzyme C-terminal domain M5598_RS10190 PF00501 AMP-binding enzyme M5598_RS10195 PF00375 Sodium:dicarboxylate symporter family M5598_RS10200 PF17327 Acyl homoserine lactone synthase M5598_RS10205 PF00072 Response regulator receiver domain M5598_RS10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS10215 PF04279 Intracellular septation protein A M5598_RS10220 PF03061 Thioesterase superfamily M5598_RS10225 PF03795 YCII-related domain M5598_RS10235 PF01717 Cobalamin-independent synthase, Catalytic domain M5598_RS10235 PF08267 Cobalamin-independent synthase, N-terminal domain M5598_RS10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS10240 PF03466 LysR substrate binding domain M5598_RS10255 PF01590 GAF domain M5598_RS10255 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS10255 PF00989 PAS fold M5598_RS10255 PF00563 EAL domain M5598_RS10260 PF08497 Radical SAM N-terminal M5598_RS10260 PF11842 Domain of unknown function (DUF3362) M5598_RS10260 PF04055 Radical SAM superfamily M5598_RS10265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS10265 PF00672 HAMP domain M5598_RS10270 PF00072 Response regulator receiver domain M5598_RS10270 PF00486 Transcriptional regulatory protein, C terminal M5598_RS10275 PF00672 HAMP domain M5598_RS10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS10275 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS10295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS10295 PF03466 LysR substrate binding domain M5598_RS10300 PF00529 HlyD membrane-fusion protein of T1SS M5598_RS10300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS10320 PF00265 Thymidine kinase M5598_RS10325 PF01406 tRNA synthetases class I (C) catalytic domain M5598_RS10325 PF09190 DALR domain M5598_RS10330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M5598_RS10335 PF00149 Calcineurin-like phosphoesterase M5598_RS10340 PF08668 HDOD domain M5598_RS10340 PF00563 EAL domain M5598_RS10345 PF02810 SEC-C motif M5598_RS10350 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M5598_RS10350 PF01502 Phosphoribosyl-AMP cyclohydrolase M5598_RS10355 PF00977 Histidine biosynthesis protein M5598_RS10360 PF00977 Histidine biosynthesis protein M5598_RS10365 PF00117 Glutamine amidotransferase class-I M5598_RS10370 PF08645 Polynucleotide kinase 3 phosphatase M5598_RS10370 PF00475 Imidazoleglycerol-phosphate dehydratase M5598_RS10375 PF00155 Aminotransferase class I and II M5598_RS10380 PF00815 Histidinol dehydrogenase M5598_RS10385 PF01634 ATP phosphoribosyltransferase M5598_RS10385 PF08029 HisG, C-terminal domain M5598_RS10390 PF00158 Sigma-54 interaction domain M5598_RS10390 PF00072 Response regulator receiver domain M5598_RS10390 PF02954 Bacterial regulatory protein, Fis family M5598_RS10400 PF03553 Na+/H+ antiporter family M5598_RS10405 PF00816 H-NS histone family M5598_RS10410 PF00294 pfkB family carbohydrate kinase M5598_RS10425 PF04356 Protein of unknown function (DUF489) M5598_RS10430 PF08328 Adenylosuccinate lyase C-terminal M5598_RS10430 PF00206 Lyase M5598_RS10465 PF00106 short chain dehydrogenase M5598_RS10475 PF01435 Peptidase family M48 M5598_RS10490 PF08241 Methyltransferase domain M5598_RS10495 PF00155 Aminotransferase class I and II M5598_RS10500 PF06968 Biotin and Thiamin Synthesis associated domain M5598_RS10500 PF04055 Radical SAM superfamily M5598_RS10505 PF00202 Aminotransferase class-III M5598_RS10510 PF01258 Prokaryotic dksA/traR C4-type zinc finger M5598_RS10525 PF02403 Seryl-tRNA synthetase N-terminal domain M5598_RS10525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M5598_RS10530 PF00004 ATPase family associated with various cellular activities (AAA) M5598_RS10530 PF16193 AAA C-terminal domain M5598_RS10530 PF12002 MgsA AAA+ ATPase C terminal M5598_RS10535 PF03548 Outer membrane lipoprotein carrier protein LolA M5598_RS10540 PF01580 FtsK/SpoIIIE family M5598_RS10540 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M5598_RS10540 PF17854 FtsK alpha domain M5598_RS10540 PF09397 Ftsk gamma domain M5598_RS10545 PF01037 Lrp/AsnC ligand binding domain M5598_RS10550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M5598_RS10550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M5598_RS10560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS10560 PF03466 LysR substrate binding domain M5598_RS10570 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M5598_RS10575 PF03372 Endonuclease/Exonuclease/phosphatase family M5598_RS10600 PF00873 AcrB/AcrD/AcrF family M5598_RS10605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS10605 PF00529 HlyD membrane-fusion protein of T1SS M5598_RS10610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS10610 PF00672 HAMP domain M5598_RS10610 PF12729 Four helix bundle sensory module for signal transduction M5598_RS10620 PF06610 L-alanine exporter M5598_RS10625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS10625 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS10625 PF09308 LuxQ, periplasmic M5598_RS10625 PF00072 Response regulator receiver domain M5598_RS10635 PF03738 Glutathionylspermidine synthase preATP-grasp M5598_RS10645 PF03994 Domain of Unknown Function (DUF350) M5598_RS10655 PF02445 Quinolinate synthetase A protein M5598_RS10660 PF00072 Response regulator receiver domain M5598_RS10660 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS10665 PF02903 Alpha amylase, N-terminal ig-like domain M5598_RS10665 PF00128 Alpha amylase, catalytic domain M5598_RS10670 PF00005 ABC transporter M5598_RS10675 PF02653 Branched-chain amino acid transport system / permease component M5598_RS10685 PF04217 Protein of unknown function, DUF412 M5598_RS10690 PF00871 Acetokinase family M5598_RS10695 PF01515 Phosphate acetyl/butaryl transferase M5598_RS10695 PF07085 DRTGG domain M5598_RS10700 PF13194 Domain of unknown function (DUF4010) M5598_RS10710 PF13409 Glutathione S-transferase, N-terminal domain M5598_RS10715 PF00005 ABC transporter M5598_RS10715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS10720 PF00005 ABC transporter M5598_RS10720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS10725 PF12911 N-terminal TM domain of oligopeptide transport permease C M5598_RS10725 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS10730 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS10735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS10740 PF02391 MoaE protein M5598_RS10745 PF02597 ThiS family M5598_RS10750 PF01967 MoaC family M5598_RS10755 PF00994 Probable molybdopterin binding domain M5598_RS10760 PF04055 Radical SAM superfamily M5598_RS10760 PF06463 Molybdenum Cofactor Synthesis C M5598_RS10765 PF01933 Uncharacterised protein family UPF0052 M5598_RS10770 PF01627 Hpt domain M5598_RS10775 PF00158 Sigma-54 interaction domain M5598_RS10775 PF00072 Response regulator receiver domain M5598_RS10775 PF02954 Bacterial regulatory protein, Fis family M5598_RS10780 PF12344 Ultra-violet resistance protein B M5598_RS10780 PF17757 UvrB interaction domain M5598_RS10780 PF02151 UvrB/uvrC motif M5598_RS10780 PF04851 Type III restriction enzyme, res subunit M5598_RS10780 PF00271 Helicase conserved C-terminal domain M5598_RS10795 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS10800 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS10805 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS10810 PF00005 ABC transporter M5598_RS10825 PF02901 Pyruvate formate lyase-like M5598_RS10825 PF01228 Glycine radical M5598_RS10835 PF04055 Radical SAM superfamily M5598_RS10845 PF03887 YfbU domain M5598_RS10850 PF08298 PrkA AAA domain M5598_RS10850 PF06798 PrkA serine protein kinase C-terminal domain M5598_RS10855 PF04285 Protein of unknown function (DUF444) M5598_RS10860 PF04293 SpoVR like protein M5598_RS10865 PF02348 Cytidylyltransferase M5598_RS10870 PF03966 Trm112p-like protein M5598_RS10875 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M5598_RS10880 PF00005 ABC transporter M5598_RS10880 PF00664 ABC transporter transmembrane region M5598_RS10885 PF00753 Metallo-beta-lactamase superfamily M5598_RS10885 PF03772 Competence protein M5598_RS10885 PF13567 Domain of unknown function (DUF4131) M5598_RS10895 PF02687 FtsX-like permease family M5598_RS10895 PF12704 MacB-like periplasmic core domain M5598_RS10900 PF00005 ABC transporter M5598_RS10905 PF02687 FtsX-like permease family M5598_RS10905 PF12704 MacB-like periplasmic core domain M5598_RS10915 PF00270 DEAD/DEAH box helicase M5598_RS10915 PF00271 Helicase conserved C-terminal domain M5598_RS10915 PF17757 UvrB interaction domain M5598_RS10915 PF03461 TRCF domain M5598_RS10915 PF02559 CarD-like/TRCF domain M5598_RS10935 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS10940 PF05728 Uncharacterised protein family (UPF0227) M5598_RS10950 PF13036 Peptidoglycan-synthase activator LpoB M5598_RS10950 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M5598_RS10965 PF01230 HIT domain M5598_RS10970 PF00672 HAMP domain M5598_RS10970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS10980 PF01048 Phosphorylase superfamily M5598_RS10985 PF00403 Heavy-metal-associated domain M5598_RS10990 PF00478 IMP dehydrogenase / GMP reductase domain M5598_RS10990 PF00571 CBS domain M5598_RS11000 PF00037 4Fe-4S binding domain M5598_RS11000 PF11953 Domain of unknown function (DUF3470) M5598_RS11005 PF00588 SpoU rRNA Methylase family M5598_RS11005 PF08032 RNA 2'-O ribose methyltransferase substrate binding M5598_RS11015 PF17152 Periplasmic sensor domain M5598_RS11015 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS11025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M5598_RS11030 PF09619 Type III secretion system lipoprotein chaperone (YscW) M5598_RS11045 PF13404 AsnC-type helix-turn-helix domain M5598_RS11045 PF01037 Lrp/AsnC ligand binding domain M5598_RS11050 PF00291 Pyridoxal-phosphate dependent enzyme M5598_RS11070 PF00873 AcrB/AcrD/AcrF family M5598_RS11075 PF13533 Biotin-lipoyl like M5598_RS11120 PF07690 Major Facilitator Superfamily M5598_RS11125 PF03601 Conserved hypothetical protein 698 M5598_RS11135 PF13193 AMP-binding enzyme C-terminal domain M5598_RS11135 PF00501 AMP-binding enzyme M5598_RS11140 PF13378 Enolase C-terminal domain-like M5598_RS11145 PF00378 Enoyl-CoA hydratase/isomerase M5598_RS11150 PF12697 Alpha/beta hydrolase family M5598_RS11155 PF16582 Middle domain of thiamine pyrophosphate M5598_RS11155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M5598_RS11155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M5598_RS11160 PF00425 chorismate binding enzyme M5598_RS11165 PF00155 Aminotransferase class I and II M5598_RS11175 PF01966 HD domain M5598_RS11175 PF13286 Phosphohydrolase-associated domain M5598_RS11195 PF13145 PPIC-type PPIASE domain M5598_RS11200 PF00216 Bacterial DNA-binding protein M5598_RS11205 PF00004 ATPase family associated with various cellular activities (AAA) M5598_RS11205 PF05362 Lon protease (S16) C-terminal proteolytic domain M5598_RS11205 PF02190 ATP-dependent protease La (LON) substrate-binding domain M5598_RS11210 PF07724 AAA domain (Cdc48 subfamily) M5598_RS11210 PF10431 C-terminal, D2-small domain, of ClpB protein M5598_RS11210 PF06689 ClpX C4-type zinc finger M5598_RS11215 PF00574 Clp protease M5598_RS11220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M5598_RS11220 PF05697 Bacterial trigger factor protein (TF) M5598_RS11220 PF05698 Bacterial trigger factor protein (TF) C-terminus M5598_RS11230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS11230 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS11230 PF02743 Cache domain M5598_RS11235 PF02954 Bacterial regulatory protein, Fis family M5598_RS11235 PF00072 Response regulator receiver domain M5598_RS11235 PF00158 Sigma-54 interaction domain M5598_RS11245 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M5598_RS11250 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M5598_RS11255 PF03480 Bacterial extracellular solute-binding protein, family 7 M5598_RS11260 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M5598_RS11275 PF02386 Cation transport protein M5598_RS11280 PF02080 TrkA-C domain M5598_RS11280 PF02254 TrkA-N domain M5598_RS11285 PF00270 DEAD/DEAH box helicase M5598_RS11285 PF00271 Helicase conserved C-terminal domain M5598_RS11290 PF01595 Cyclin M transmembrane N-terminal domain M5598_RS11290 PF00571 CBS domain M5598_RS11290 PF03471 Transporter associated domain M5598_RS11300 PF04820 Tryptophan halogenase M5598_RS11325 PF00550 Phosphopantetheine attachment site M5598_RS11330 PF00550 Phosphopantetheine attachment site M5598_RS11345 PF07977 FabA-like domain M5598_RS11350 PF00535 Glycosyl transferase family 2 M5598_RS11355 PF00221 Aromatic amino acid lyase M5598_RS11380 PF02801 Beta-ketoacyl synthase, C-terminal domain M5598_RS11380 PF00109 Beta-ketoacyl synthase, N-terminal domain M5598_RS11385 PF07977 FabA-like domain M5598_RS11395 PF00109 Beta-ketoacyl synthase, N-terminal domain M5598_RS11395 PF02801 Beta-ketoacyl synthase, C-terminal domain M5598_RS11410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M5598_RS11410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M5598_RS11415 PF01773 Na+ dependent nucleoside transporter N-terminus M5598_RS11415 PF07662 Na+ dependent nucleoside transporter C-terminus M5598_RS11415 PF07670 Nucleoside recognition M5598_RS11420 PF03466 LysR substrate binding domain M5598_RS11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS11425 PF13406 Transglycosylase SLT domain M5598_RS11430 PF05166 YcgL domain M5598_RS11435 PF03775 Septum formation inhibitor MinC, C-terminal domain M5598_RS11435 PF05209 Septum formation inhibitor MinC, N-terminal domain M5598_RS11440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M5598_RS11445 PF03776 Septum formation topological specificity factor MinE M5598_RS11450 PF00570 HRDC domain M5598_RS11450 PF01612 3'-5' exonuclease M5598_RS11455 PF13193 AMP-binding enzyme C-terminal domain M5598_RS11455 PF00501 AMP-binding enzyme M5598_RS11460 PF00561 alpha/beta hydrolase fold M5598_RS11475 PF00814 Glycoprotease family M5598_RS11480 PF04851 Type III restriction enzyme, res subunit M5598_RS11480 PF13307 Helicase C-terminal domain M5598_RS11485 PF01842 ACT domain M5598_RS11485 PF00551 Formyl transferase M5598_RS11490 PF06185 YecM protein M5598_RS11495 PF00750 tRNA synthetases class I (R) M5598_RS11495 PF05746 DALR anticodon binding domain M5598_RS11495 PF03485 Arginyl tRNA synthetase N terminal domain M5598_RS11510 PF17910 FeoB cytosolic helical domain M5598_RS11510 PF07670 Nucleoside recognition M5598_RS11510 PF07664 Ferrous iron transport protein B C terminus M5598_RS11510 PF02421 Ferrous iron transport protein B M5598_RS11515 PF04023 FeoA domain M5598_RS11520 PF02311 AraC-like ligand binding domain M5598_RS11520 PF12833 Helix-turn-helix domain M5598_RS11525 PF01297 Zinc-uptake complex component A periplasmic M5598_RS11530 PF00005 ABC transporter M5598_RS11535 PF00950 ABC 3 transport family M5598_RS11540 PF13230 Glutamine amidotransferases class-II M5598_RS11545 PF13580 SIS domain M5598_RS11550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5598_RS11550 PF09317 Domain of unknown function (DUF1974) M5598_RS11550 PF02770 Acyl-CoA dehydrogenase, middle domain M5598_RS11550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5598_RS11555 PF01740 STAS domain M5598_RS11555 PF00916 Sulfate permease family M5598_RS11565 PF00929 Exonuclease M5598_RS11570 PF00075 RNase H M5598_RS11575 PF08241 Methyltransferase domain M5598_RS11580 PF16123 Hydroxyacylglutathione hydrolase C-terminus M5598_RS11580 PF00753 Metallo-beta-lactamase superfamily M5598_RS11585 PF01464 Transglycosylase SLT domain M5598_RS11585 PF01476 LysM domain M5598_RS11595 PF03372 Endonuclease/Exonuclease/phosphatase family M5598_RS11600 PF00543 Nitrogen regulatory protein P-II M5598_RS11605 PF00034 Cytochrome c M5598_RS11610 PF01171 PP-loop family M5598_RS11610 PF09179 TilS substrate binding domain M5598_RS11610 PF11734 TilS substrate C-terminal domain M5598_RS11615 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M5598_RS11620 PF01336 OB-fold nucleic acid binding domain M5598_RS11620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M5598_RS11620 PF14579 Helix-hairpin-helix motif M5598_RS11620 PF02811 PHP domain M5598_RS11620 PF07733 Bacterial DNA polymerase III alpha NTPase domain M5598_RS11625 PF01351 Ribonuclease HII M5598_RS11630 PF02684 Lipid-A-disaccharide synthetase M5598_RS11635 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M5598_RS11635 PF00132 Bacterial transferase hexapeptide (six repeats) M5598_RS11640 PF07977 FabA-like domain M5598_RS11645 PF00132 Bacterial transferase hexapeptide (six repeats) M5598_RS11645 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M5598_RS11650 PF03938 Outer membrane protein (OmpH-like) M5598_RS11655 PF01103 Surface antigen M5598_RS11655 PF07244 Surface antigen variable number repeat M5598_RS11660 PF02163 Peptidase family M50 M5598_RS11660 PF17820 PDZ domain M5598_RS11665 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M5598_RS11665 PF13288 DXP reductoisomerase C-terminal domain M5598_RS11665 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M5598_RS11675 PF01255 Putative undecaprenyl diphosphate synthase M5598_RS11680 PF01765 Ribosome recycling factor M5598_RS11685 PF00696 Amino acid kinase family M5598_RS11690 PF00889 Elongation factor TS M5598_RS11695 PF00318 Ribosomal protein S2 M5598_RS11700 PF00557 Metallopeptidase family M24 M5598_RS11705 PF01842 ACT domain M5598_RS11705 PF08335 GlnD PII-uridylyltransferase M5598_RS11705 PF01966 HD domain M5598_RS11705 PF01909 Nucleotidyltransferase domain M5598_RS11710 PF11944 Protein of unknown function (DUF3461) M5598_RS11715 PF00849 RNA pseudouridylate synthase M5598_RS11720 PF04287 tRNA pseudouridine synthase C M5598_RS11745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M5598_RS11750 PF03806 AbgT putative transporter family M5598_RS11755 PF00444 Ribosomal protein L36 M5598_RS11760 PF01197 Ribosomal protein L31 M5598_RS11765 PF18389 TrmO C-terminal domain M5598_RS11765 PF01980 tRNA-methyltransferase O M5598_RS11770 PF03129 Anticodon binding domain M5598_RS11770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M5598_RS11770 PF04073 Aminoacyl-tRNA editing domain M5598_RS11780 PF06786 Uncharacterised protein family (UPF0253) M5598_RS11790 PF00209 Sodium:neurotransmitter symporter family M5598_RS11805 PF01272 Transcription elongation factor, GreA/GreB, C-term M5598_RS11805 PF03449 Transcription elongation factor, N-terminal M5598_RS11810 PF09382 RQC domain M5598_RS11810 PF16124 RecQ zinc-binding M5598_RS11810 PF00271 Helicase conserved C-terminal domain M5598_RS11810 PF00270 DEAD/DEAH box helicase M5598_RS11810 PF00570 HRDC domain M5598_RS11815 PF11799 impB/mucB/samB family C-terminal domain M5598_RS11815 PF11798 IMS family HHH motif M5598_RS11815 PF00817 impB/mucB/samB family M5598_RS11830 PF02424 ApbE family M5598_RS11835 PF00970 Oxidoreductase FAD-binding domain M5598_RS11835 PF00111 2Fe-2S iron-sulfur cluster binding domain M5598_RS11835 PF00175 Oxidoreductase NAD-binding domain M5598_RS11840 PF02508 Rnf-Nqr subunit, membrane protein M5598_RS11845 PF02508 Rnf-Nqr subunit, membrane protein M5598_RS11850 PF04205 FMN-binding domain M5598_RS11855 PF03116 NQR2, RnfD, RnfE family M5598_RS11860 PF11973 NQRA C-terminal domain M5598_RS11860 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) M5598_RS11865 PF01722 BolA-like protein M5598_RS11870 PF05175 Methyltransferase small domain M5598_RS11875 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M5598_RS11875 PF03923 Uncharacterized lipoprotein M5598_RS11880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M5598_RS11885 PF07690 Major Facilitator Superfamily M5598_RS11895 PF04542 Sigma-70 region 2 M5598_RS11895 PF04545 Sigma-70, region 4 M5598_RS11910 PF03502 Nucleoside-specific channel-forming protein, Tsx M5598_RS11915 PF08546 Ketopantoate reductase PanE/ApbA C terminal M5598_RS11915 PF02558 Ketopantoate reductase PanE/ApbA M5598_RS11920 PF01965 DJ-1/PfpI family M5598_RS11925 PF00266 Aminotransferase class-V M5598_RS11930 PF17158 Membrane-associated sensor, integral membrane domain M5598_RS11930 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS11940 PF02657 Fe-S metabolism associated domain M5598_RS11945 PF00899 ThiF family M5598_RS11950 PF06725 3D domain M5598_RS11950 PF03562 MltA specific insert domain M5598_RS11960 PF00583 Acetyltransferase (GNAT) family M5598_RS11960 PF00696 Amino acid kinase family M5598_RS11970 PF13538 UvrD-like helicase C-terminal domain M5598_RS11975 PF13361 UvrD-like helicase C-terminal domain M5598_RS11975 PF00580 UvrD/REP helicase N-terminal domain M5598_RS11975 PF12705 PD-(D/E)XK nuclease superfamily M5598_RS11980 PF17946 RecC C-terminal domain M5598_RS11985 PF11893 Domain of unknown function (DUF3413) M5598_RS11985 PF00884 Sulfatase M5598_RS11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS11995 PF03466 LysR substrate binding domain M5598_RS12000 PF07130 YebG protein M5598_RS12005 PF14602 Hexapeptide repeat of succinyl-transferase M5598_RS12005 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle M5598_RS12010 PF03009 Glycerophosphoryl diester phosphodiesterase family M5598_RS12015 PF07690 Major Facilitator Superfamily M5598_RS12020 PF00230 Major intrinsic protein M5598_RS12025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M5598_RS12025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M5598_RS12030 PF00455 DeoR C terminal sensor domain M5598_RS12030 PF08220 DeoR-like helix-turn-helix domain M5598_RS12035 PF01266 FAD dependent oxidoreductase M5598_RS12035 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M5598_RS12040 PF01544 CorA-like Mg2+ transporter protein M5598_RS12055 PF01588 Putative tRNA binding domain M5598_RS12060 PF00356 Bacterial regulatory proteins, lacI family M5598_RS12075 PF00356 Bacterial regulatory proteins, lacI family M5598_RS12080 PF01263 Aldose 1-epimerase M5598_RS12085 PF10509 Galactokinase galactose-binding signature M5598_RS12085 PF08544 GHMP kinases C terminal M5598_RS12085 PF00288 GHMP kinases N terminal domain M5598_RS12090 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M5598_RS12090 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M5598_RS12095 PF16363 GDP-mannose 4,6 dehydratase M5598_RS12100 PF00356 Bacterial regulatory proteins, lacI family M5598_RS12105 PF02837 Glycosyl hydrolases family 2, sugar binding domain M5598_RS12105 PF02929 Beta galactosidase small chain M5598_RS12105 PF00703 Glycosyl hydrolases family 2 M5598_RS12105 PF16353 Domain of unknown function(DUF4981) M5598_RS12105 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M5598_RS12110 PF04074 YhcH/YjgK/YiaL M5598_RS12115 PF13520 Amino acid permease M5598_RS12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS12120 PF03466 LysR substrate binding domain M5598_RS12150 PF00437 Type II/IV secretion system protein M5598_RS12180 PF04972 BON domain M5598_RS12180 PF00263 Bacterial type II and III secretion system protein M5598_RS12180 PF13629 Pilus formation protein N terminal region M5598_RS12205 PF02805 Metal binding domain of Ada M5598_RS12205 PF12833 Helix-turn-helix domain M5598_RS12210 PF00501 AMP-binding enzyme M5598_RS12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS12220 PF03466 LysR substrate binding domain M5598_RS12225 PF14492 Elongation Factor G, domain II M5598_RS12225 PF03764 Elongation factor G, domain IV M5598_RS12225 PF00009 Elongation factor Tu GTP binding domain M5598_RS12225 PF03144 Elongation factor Tu domain 2 M5598_RS12225 PF00679 Elongation factor G C-terminus M5598_RS12230 PF18073 Rubredoxin metal binding domain M5598_RS12240 PF18429 Domain of unknown function (DUF5609) M5598_RS12250 PF01048 Phosphorylase superfamily M5598_RS12255 PF01676 Metalloenzyme superfamily M5598_RS12260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M5598_RS12260 PF00591 Glycosyl transferase family, a/b domain M5598_RS12260 PF02885 Glycosyl transferase family, helical bundle domain M5598_RS12265 PF01791 DeoC/LacD family aldolase M5598_RS12270 PF01773 Na+ dependent nucleoside transporter N-terminus M5598_RS12270 PF07662 Na+ dependent nucleoside transporter C-terminus M5598_RS12270 PF07670 Nucleoside recognition M5598_RS12275 PF01026 TatD related DNase M5598_RS12285 PF03144 Elongation factor Tu domain 2 M5598_RS12285 PF16658 Class II release factor RF3, C-terminal domain M5598_RS12285 PF00009 Elongation factor Tu GTP binding domain M5598_RS12305 PF13508 Acetyltransferase (GNAT) domain M5598_RS12310 PF02036 SCP-2 sterol transfer family M5598_RS12315 PF00563 EAL domain M5598_RS12315 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS12315 PF03707 Bacterial signalling protein N terminal repeat M5598_RS12320 PF01136 Peptidase family U32 M5598_RS12325 PF01136 Peptidase family U32 M5598_RS12330 PF01554 MatE M5598_RS12340 PF07719 Tetratricopeptide repeat M5598_RS12340 PF13181 Tetratricopeptide repeat M5598_RS12345 PF00575 S1 RNA binding domain M5598_RS12345 PF00013 KH domain M5598_RS12345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M5598_RS12345 PF01138 3' exoribonuclease family, domain 1 M5598_RS12345 PF03725 3' exoribonuclease family, domain 2 M5598_RS12350 PF00312 Ribosomal protein S15 M5598_RS12355 PF09157 Pseudouridine synthase II TruB, C-terminal M5598_RS12355 PF16198 tRNA pseudouridylate synthase B C-terminal domain M5598_RS12355 PF01509 TruB family pseudouridylate synthase (N terminal domain) M5598_RS12360 PF02033 Ribosome-binding factor A M5598_RS12365 PF00009 Elongation factor Tu GTP binding domain M5598_RS12365 PF04760 Translation initiation factor IF-2, N-terminal region M5598_RS12365 PF08364 Bacterial translation initiation factor IF-2 associated region M5598_RS12365 PF11987 Translation-initiation factor 2 M5598_RS12370 PF00575 S1 RNA binding domain M5598_RS12370 PF13184 NusA-like KH domain M5598_RS12370 PF08529 NusA N-terminal domain M5598_RS12375 PF17384 RimP C-terminal SH3 domain M5598_RS12375 PF02576 RimP N-terminal domain M5598_RS12390 PF03840 Preprotein translocase SecG subunit M5598_RS12395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M5598_RS12395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M5598_RS12395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M5598_RS12395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M5598_RS12400 PF00809 Pterin binding enzyme M5598_RS12405 PF06480 FtsH Extracellular M5598_RS12405 PF01434 Peptidase family M41 M5598_RS12405 PF17862 AAA+ lid domain M5598_RS12405 PF00004 ATPase family associated with various cellular activities (AAA) M5598_RS12410 PF01728 FtsJ-like methyltransferase M5598_RS12415 PF01985 CRS1 / YhbY (CRM) domain M5598_RS12420 PF01272 Transcription elongation factor, GreA/GreB, C-term M5598_RS12420 PF03449 Transcription elongation factor, N-terminal M5598_RS12425 PF13609 Gram-negative porin M5598_RS12430 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M5598_RS12445 PF14437 MafB19-like deaminase M5598_RS12450 PF03806 AbgT putative transporter family M5598_RS12475 PF07963 Prokaryotic N-terminal methylation motif M5598_RS12475 PF00114 Pilin (bacterial filament) M5598_RS12480 PF00226 DnaJ domain M5598_RS12480 PF01556 DnaJ C terminal domain M5598_RS12480 PF00684 DnaJ central domain M5598_RS12485 PF00012 Hsp70 protein M5598_RS12490 PF00375 Sodium:dicarboxylate symporter family M5598_RS12495 PF01025 GrpE M5598_RS12500 PF01513 ATP-NAD kinase M5598_RS12510 PF02463 RecF/RecN/SMC N terminal domain M5598_RS12515 PF04355 SmpA / OmlA family M5598_RS12520 PF03658 RnfH family Ubiquitin M5598_RS12525 PF03364 Polyketide cyclase / dehydrase and lipid transport M5598_RS12530 PF01668 SmpB protein M5598_RS12570 PF05840 Bacteriophage replication gene A protein (GPA) M5598_RS12610 PF02384 N-6 DNA Methylase M5598_RS12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS12635 PF03466 LysR substrate binding domain M5598_RS12640 PF00583 Acetyltransferase (GNAT) family M5598_RS12640 PF00795 Carbon-nitrogen hydrolase M5598_RS12660 PF00202 Aminotransferase class-III M5598_RS12665 PF01053 Cys/Met metabolism PLP-dependent enzyme M5598_RS12670 PF07969 Amidohydrolase family M5598_RS12685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS12685 PF03466 LysR substrate binding domain M5598_RS12690 PF01266 FAD dependent oxidoreductase M5598_RS12695 PF01235 Sodium:alanine symporter family M5598_RS12705 PF01184 GPR1/FUN34/yaaH family M5598_RS12710 PF00704 Glycosyl hydrolases family 18 M5598_RS12710 PF06483 Chitinase C M5598_RS12715 PF03553 Na+/H+ antiporter family M5598_RS12720 PF00117 Glutamine amidotransferase class-I M5598_RS12720 PF00958 GMP synthase C terminal domain M5598_RS12720 PF02540 NAD synthase M5598_RS12725 PF00571 CBS domain M5598_RS12725 PF00478 IMP dehydrogenase / GMP reductase domain M5598_RS12730 PF02601 Exonuclease VII, large subunit M5598_RS12730 PF13742 OB-fold nucleic acid binding domain M5598_RS12745 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M5598_RS12745 PF01926 50S ribosome-binding GTPase M5598_RS12750 PF13360 PQQ-like domain M5598_RS12755 PF09976 Tetratricopeptide repeat-like domain M5598_RS12760 PF13393 Histidyl-tRNA synthetase M5598_RS12760 PF03129 Anticodon binding domain M5598_RS12765 PF04551 GcpE protein M5598_RS12770 PF13464 Domain of unknown function (DUF4115) M5598_RS12775 PF04055 Radical SAM superfamily M5598_RS12780 PF00334 Nucleoside diphosphate kinase M5598_RS12785 PF12404 Peptidase M5598_RS12785 PF00883 Cytosol aminopeptidase family, catalytic domain M5598_RS12790 PF04384 Iron-sulphur cluster assembly M5598_RS12795 PF00111 2Fe-2S iron-sulfur cluster binding domain M5598_RS12800 PF00012 Hsp70 protein M5598_RS12805 PF00226 DnaJ domain M5598_RS12805 PF07743 HSCB C-terminal oligomerisation domain M5598_RS12810 PF01521 Iron-sulphur cluster biosynthesis M5598_RS12815 PF01592 NifU-like N terminal domain M5598_RS12820 PF00266 Aminotransferase class-V M5598_RS12825 PF02082 Transcriptional regulator M5598_RS12830 PF00588 SpoU rRNA Methylase family M5598_RS12835 PF00459 Inositol monophosphatase family M5598_RS12840 PF07549 SecD/SecF GG Motif M5598_RS12840 PF02355 Protein export membrane protein M5598_RS12845 PF02355 Protein export membrane protein M5598_RS12845 PF07549 SecD/SecF GG Motif M5598_RS12845 PF13721 SecD export protein N-terminal TM region M5598_RS12850 PF02699 Preprotein translocase subunit M5598_RS12855 PF01702 Queuine tRNA-ribosyltransferase M5598_RS12860 PF02547 Queuosine biosynthesis protein M5598_RS12870 PF00571 CBS domain M5598_RS12875 PF00463 Isocitrate lyase family M5598_RS12880 PF01274 Malate synthase M5598_RS12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS12885 PF03466 LysR substrate binding domain M5598_RS12890 PF10417 C-terminal domain of 1-Cys peroxiredoxin M5598_RS12890 PF00578 AhpC/TSA family M5598_RS12895 PF03932 CutC family M5598_RS12900 PF03976 Polyphosphate kinase 2 (PPK2) M5598_RS12905 PF01895 PhoU domain M5598_RS12910 PF00005 ABC transporter M5598_RS12915 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS12920 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS12925 PF13090 Polyphosphate kinase C-terminal domain 2 M5598_RS12925 PF13089 Polyphosphate kinase N-terminal domain M5598_RS12925 PF17941 Polyphosphate kinase C-terminal domain 1 M5598_RS12925 PF02503 Polyphosphate kinase middle domain M5598_RS12930 PF02541 Ppx/GppA phosphatase family M5598_RS12935 PF12849 PBP superfamily domain M5598_RS12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS12940 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS12940 PF00989 PAS fold M5598_RS12940 PF11808 Phosphate regulon sensor protein PhoR M5598_RS12945 PF00072 Response regulator receiver domain M5598_RS12945 PF00486 Transcriptional regulatory protein, C terminal M5598_RS12950 PF04381 Putative exonuclease, RdgC M5598_RS12955 PF16325 Peptidase family U32 C-terminal domain M5598_RS12955 PF01136 Peptidase family U32 M5598_RS12960 PF00037 4Fe-4S binding domain M5598_RS12970 PF03411 Penicillin-insensitive murein endopeptidase M5598_RS13015 PF00004 ATPase family associated with various cellular activities (AAA) M5598_RS13015 PF07724 AAA domain (Cdc48 subfamily) M5598_RS13015 PF17871 AAA lid domain M5598_RS13015 PF02861 Clp amino terminal domain, pathogenicity island component M5598_RS13015 PF10431 C-terminal, D2-small domain, of ClpB protein M5598_RS13020 PF02578 Multi-copper polyphenol oxidoreductase laccase M5598_RS13025 PF00849 RNA pseudouridylate synthase M5598_RS13025 PF01479 S4 domain M5598_RS13030 PF13525 Outer membrane lipoprotein M5598_RS13035 PF01464 Transglycosylase SLT domain M5598_RS13040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M5598_RS13045 PF00800 Prephenate dehydratase M5598_RS13045 PF01817 Chorismate mutase type II M5598_RS13050 PF01931 Protein of unknown function DUF84 M5598_RS13055 PF01371 Trp repressor protein M5598_RS13060 PF01464 Transglycosylase SLT domain M5598_RS13060 PF14718 Soluble lytic murein transglycosylase L domain M5598_RS13065 PF00005 ABC transporter M5598_RS13065 PF12848 ABC transporter M5598_RS13070 PF07238 PilZ domain M5598_RS13075 PF04225 Opacity-associated protein A LysM-like domain M5598_RS13075 PF01551 Peptidase family M23 M5598_RS13080 PF01817 Chorismate mutase type II M5598_RS13080 PF02153 Prephenate dehydrogenase M5598_RS13085 PF00793 DAHP synthetase I family M5598_RS13090 PF00933 Glycosyl hydrolase family 3 N terminal domain M5598_RS13095 PF03702 Anhydro-N-acetylmuramic acid kinase M5598_RS13100 PF13580 SIS domain M5598_RS13115 PF02554 Carbon starvation protein CstA M5598_RS13120 PF06580 Histidine kinase M5598_RS13120 PF07694 5TMR of 5TMR-LYT M5598_RS13125 PF04397 LytTr DNA-binding domain M5598_RS13125 PF00072 Response regulator receiver domain M5598_RS13130 PF02401 LytB protein M5598_RS13135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M5598_RS13140 PF01252 Signal peptidase (SPase) II M5598_RS13145 PF08264 Anticodon-binding domain of tRNA M5598_RS13145 PF00133 tRNA synthetases class I (I, L, M and V) M5598_RS13145 PF06827 Zinc finger found in FPG and IleRS M5598_RS13150 PF06574 FAD synthetase M5598_RS13150 PF01687 Riboflavin kinase M5598_RS13155 PF03023 Lipid II flippase MurJ M5598_RS13160 PF01649 Ribosomal protein S20 M5598_RS13165 PF01022 Bacterial regulatory protein, arsR family M5598_RS13170 PF03466 LysR substrate binding domain M5598_RS13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS13175 PF02690 Na+/Pi-cotransporter M5598_RS13185 PF00303 Thymidylate synthase M5598_RS13190 PF01790 Prolipoprotein diacylglyceryl transferase M5598_RS13195 PF01925 Sulfite exporter TauE/SafE M5598_RS13200 PF01590 GAF domain M5598_RS13200 PF05524 PEP-utilising enzyme, N-terminal M5598_RS13200 PF00391 PEP-utilising enzyme, mobile domain M5598_RS13200 PF02896 PEP-utilising enzyme, TIM barrel domain M5598_RS13205 PF00293 NUDIX domain M5598_RS13210 PF02976 DNA mismatch repair enzyme MutH M5598_RS13220 PF00248 Aldo/keto reductase family M5598_RS13230 PF00158 Sigma-54 interaction domain M5598_RS13230 PF02954 Bacterial regulatory protein, Fis family M5598_RS13230 PF00072 Response regulator receiver domain M5598_RS13235 PF00152 tRNA synthetases class II (D, K and N) M5598_RS13235 PF01336 OB-fold nucleic acid binding domain M5598_RS13245 PF17768 RecJ OB domain M5598_RS13245 PF02272 DHHA1 domain M5598_RS13245 PF01368 DHH family M5598_RS13250 PF10411 Disulfide bond isomerase protein N-terminus M5598_RS13250 PF13098 Thioredoxin-like domain M5598_RS13255 PF02899 Phage integrase, N-terminal SAM-like domain M5598_RS13255 PF00589 Phage integrase family M5598_RS13260 PF00258 Flavodoxin M5598_RS13265 PF05525 Branched-chain amino acid transport protein M5598_RS13270 PF05175 Methyltransferase small domain M5598_RS13275 PF00271 Helicase conserved C-terminal domain M5598_RS13275 PF00270 DEAD/DEAH box helicase M5598_RS13280 PF03883 Peroxide stress protein YaaA M5598_RS13315 PF01235 Sodium:alanine symporter family M5598_RS13330 PF03167 Uracil DNA glycosylase superfamily M5598_RS13335 PF01261 Xylose isomerase-like TIM barrel M5598_RS13340 PF01228 Glycine radical M5598_RS13345 PF00291 Pyridoxal-phosphate dependent enzyme M5598_RS13345 PF14821 Threonine synthase N terminus M5598_RS13350 PF08544 GHMP kinases C terminal M5598_RS13350 PF00288 GHMP kinases N terminal domain M5598_RS13355 PF00742 Homoserine dehydrogenase M5598_RS13355 PF13840 ACT domain M5598_RS13355 PF03447 Homoserine dehydrogenase, NAD binding domain M5598_RS13355 PF00696 Amino acid kinase family M5598_RS13355 PF01842 ACT domain M5598_RS13365 PF03737 Aldolase/RraA M5598_RS13375 PF00486 Transcriptional regulatory protein, C terminal M5598_RS13375 PF00072 Response regulator receiver domain M5598_RS13385 PF00989 PAS fold M5598_RS13385 PF00072 Response regulator receiver domain M5598_RS13385 PF01627 Hpt domain M5598_RS13385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS13385 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS13385 PF18415 Histidine kinase receptor ArcB trans-membrane domain M5598_RS13390 PF00563 EAL domain M5598_RS13390 PF01590 GAF domain M5598_RS13390 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS13390 PF00360 Phytochrome region M5598_RS13395 PF04055 Radical SAM superfamily M5598_RS13395 PF16199 Radical_SAM C-terminal domain M5598_RS13400 PF01493 GXGXG motif M5598_RS13400 PF01645 Conserved region in glutamate synthase M5598_RS13400 PF04898 Glutamate synthase central domain M5598_RS13400 PF00310 Glutamine amidotransferases class-II M5598_RS13405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M5598_RS13405 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS13410 PF00310 Glutamine amidotransferases class-II M5598_RS13410 PF04898 Glutamate synthase central domain M5598_RS13410 PF01645 Conserved region in glutamate synthase M5598_RS13410 PF01493 GXGXG motif M5598_RS13415 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M5598_RS13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS13425 PF01048 Phosphorylase superfamily M5598_RS13430 PF03186 CobD/Cbib protein M5598_RS13430 PF17113 Regulatory signalling modulator protein AmpE M5598_RS13435 PF01497 Periplasmic binding protein M5598_RS13440 PF03458 UPF0126 domain M5598_RS13445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS13445 PF03466 LysR substrate binding domain M5598_RS13450 PF01925 Sulfite exporter TauE/SafE M5598_RS13465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M5598_RS13465 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M5598_RS13465 PF02142 MGS-like domain M5598_RS13470 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M5598_RS13470 PF00117 Glutamine amidotransferase class-I M5598_RS13475 PF05173 Dihydrodipicolinate reductase, C-terminus M5598_RS13475 PF01113 Dihydrodipicolinate reductase, N-terminus M5598_RS13480 PF00293 NUDIX domain M5598_RS13485 PF07516 SecA Wing and Scaffold domain M5598_RS13485 PF01043 SecA preprotein cross-linking domain M5598_RS13485 PF07517 SecA DEAD-like domain M5598_RS13485 PF02810 SEC-C motif M5598_RS13495 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M5598_RS13500 PF12327 FtsZ family, C-terminal domain M5598_RS13500 PF00091 Tubulin/FtsZ family, GTPase domain M5598_RS13505 PF02491 SHS2 domain inserted in FTSA M5598_RS13510 PF08478 POTRA domain, FtsQ-type M5598_RS13510 PF03799 Cell division protein FtsQ M5598_RS13515 PF08245 Mur ligase middle domain M5598_RS13515 PF02875 Mur ligase family, glutamate ligase domain M5598_RS13515 PF01225 Mur ligase family, catalytic domain M5598_RS13520 PF04101 Glycosyltransferase family 28 C-terminal domain M5598_RS13520 PF03033 Glycosyltransferase family 28 N-terminal domain M5598_RS13525 PF01098 Cell cycle protein M5598_RS13530 PF02875 Mur ligase family, glutamate ligase domain M5598_RS13530 PF08245 Mur ligase middle domain M5598_RS13535 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M5598_RS13535 PF00953 Glycosyl transferase family 4 M5598_RS13540 PF08245 Mur ligase middle domain M5598_RS13540 PF02875 Mur ligase family, glutamate ligase domain M5598_RS13540 PF01225 Mur ligase family, catalytic domain M5598_RS13545 PF01225 Mur ligase family, catalytic domain M5598_RS13545 PF08245 Mur ligase middle domain M5598_RS13545 PF02875 Mur ligase family, glutamate ligase domain M5598_RS13550 PF00905 Penicillin binding protein transpeptidase domain M5598_RS13550 PF03717 Penicillin-binding Protein dimerisation domain M5598_RS13555 PF04999 Cell division protein FtsL M5598_RS13560 PF01795 MraW methylase family M5598_RS13570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M5598_RS13575 PF04348 LppC putative lipoprotein M5598_RS13580 PF02021 Uncharacterised protein family UPF0102 M5598_RS13585 PF13580 SIS domain M5598_RS13590 PF04972 BON domain M5598_RS13595 PF04386 Stringent starvation protein B M5598_RS13600 PF00043 Glutathione S-transferase, C-terminal domain M5598_RS13600 PF02798 Glutathione S-transferase, N-terminal domain M5598_RS13605 PF02167 Cytochrome C1 family M5598_RS13610 PF00033 Cytochrome b/b6/petB M5598_RS13610 PF00032 Cytochrome b(C-terminal)/b6/petD M5598_RS13615 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M5598_RS13615 PF00355 Rieske [2Fe-2S] domain M5598_RS13620 PF00380 Ribosomal protein S9/S16 M5598_RS13625 PF00572 Ribosomal protein L13 M5598_RS13630 PF03969 AFG1-like ATPase M5598_RS13635 PF06295 Protein of unknown function (DUF1043) M5598_RS13640 PF00595 PDZ domain M5598_RS13645 PF13180 PDZ domain M5598_RS13650 PF00521 DNA gyrase/topoisomerase IV, subunit A M5598_RS13650 PF03989 DNA gyrase C-terminal domain, beta-propeller M5598_RS13655 PF00986 DNA gyrase B subunit, carboxyl terminus M5598_RS13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS13655 PF01751 Toprim domain M5598_RS13655 PF00204 DNA gyrase B M5598_RS13660 PF05728 Uncharacterised protein family (UPF0227) M5598_RS13665 PF00149 Calcineurin-like phosphoesterase M5598_RS13670 PF06853 Protein of unknown function (DUF1249) M5598_RS13675 PF00293 NUDIX domain M5598_RS13680 PF02321 Outer membrane efflux protein M5598_RS13685 PF00294 pfkB family carbohydrate kinase M5598_RS13685 PF01467 Cytidylyltransferase-like M5598_RS13690 PF03710 Glutamate-ammonia ligase adenylyltransferase M5598_RS13690 PF08335 GlnD PII-uridylyltransferase M5598_RS13695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS13695 PF00672 HAMP domain M5598_RS13705 PF01928 CYTH domain M5598_RS13710 PF01865 Protein of unknown function DUF47 M5598_RS13715 PF01384 Phosphate transporter family M5598_RS13720 PF08239 Bacterial SH3 domain M5598_RS13730 PF01471 Putative peptidoglycan binding domain M5598_RS13730 PF13401 AAA domain M5598_RS13735 PF01743 Poly A polymerase head domain M5598_RS13735 PF12627 Probable RNA and SrmB- binding site of polymerase A M5598_RS13735 PF01966 HD domain M5598_RS13740 PF02673 Bacitracin resistance protein BacA M5598_RS13745 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M5598_RS13750 PF02152 Dihydroneopterin aldolase M5598_RS13755 PF02660 Glycerol-3-phosphate acyltransferase M5598_RS13760 PF12697 Alpha/beta hydrolase family M5598_RS13765 PF00814 Glycoprotease family M5598_RS13770 PF01165 Ribosomal protein S21 M5598_RS13775 PF09424 Yqey-like protein M5598_RS13780 PF01807 CHC2 zinc finger M5598_RS13780 PF08275 DNA primase catalytic core, N-terminal domain M5598_RS13780 PF08278 DNA primase DnaG DnaB-binding M5598_RS13780 PF10410 DnaB-helicase binding domain of primase M5598_RS13785 PF04539 Sigma-70 region 3 M5598_RS13785 PF04545 Sigma-70, region 4 M5598_RS13785 PF04546 Sigma-70, non-essential region M5598_RS13785 PF04542 Sigma-70 region 2 M5598_RS13785 PF00140 Sigma-70 factor, region 1.2 M5598_RS13785 PF03979 Sigma-70 factor, region 1.1 M5598_RS13795 PF03180 NLPA lipoprotein M5598_RS13825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5598_RS13825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5598_RS13825 PF02378 Phosphotransferase system, EIIC M5598_RS13830 PF01232 Mannitol dehydrogenase Rossmann domain M5598_RS13830 PF08125 Mannitol dehydrogenase C-terminal domain M5598_RS13835 PF05068 Mannitol repressor M5598_RS13840 PF00989 PAS fold M5598_RS13840 PF02954 Bacterial regulatory protein, Fis family M5598_RS13840 PF00158 Sigma-54 interaction domain M5598_RS13845 PF02896 PEP-utilising enzyme, TIM barrel domain M5598_RS13845 PF00391 PEP-utilising enzyme, mobile domain M5598_RS13845 PF05524 PEP-utilising enzyme, N-terminal M5598_RS13850 PF02734 DAK2 domain M5598_RS13855 PF02733 Dak1 domain M5598_RS13860 PF00465 Iron-containing alcohol dehydrogenase M5598_RS13865 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS13865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS13865 PF00672 HAMP domain M5598_RS13870 PF00072 Response regulator receiver domain M5598_RS13870 PF00486 Transcriptional regulatory protein, C terminal M5598_RS13880 PF01380 SIS domain M5598_RS13885 PF08220 DeoR-like helix-turn-helix domain M5598_RS13885 PF00455 DeoR C terminal sensor domain M5598_RS13890 PF02887 Pyruvate kinase, alpha/beta domain M5598_RS13890 PF00224 Pyruvate kinase, barrel domain M5598_RS13900 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS13905 PF10369 Small subunit of acetolactate synthase M5598_RS13910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M5598_RS13910 PF00205 Thiamine pyrophosphate enzyme, central domain M5598_RS13910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M5598_RS13915 PF00501 AMP-binding enzyme M5598_RS13920 PF03466 LysR substrate binding domain M5598_RS13920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS13930 PF01569 PAP2 superfamily M5598_RS13940 PF08502 LeuA allosteric (dimerisation) domain M5598_RS13940 PF00682 HMGL-like M5598_RS13945 PF00180 Isocitrate/isopropylmalate dehydrogenase M5598_RS13950 PF00330 Aconitase family (aconitate hydratase) M5598_RS13955 PF00694 Aconitase C-terminal domain M5598_RS13965 PF05099 Tellurite resistance protein TerB M5598_RS13965 PF00226 DnaJ domain M5598_RS13970 PF04453 LPS transport system D M5598_RS13970 PF03968 OstA-like protein M5598_RS13975 PF09312 SurA N-terminal domain M5598_RS13980 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M5598_RS13985 PF00398 Ribosomal RNA adenine dimethylase M5598_RS13990 PF04379 ApaG domain M5598_RS13995 PF00149 Calcineurin-like phosphoesterase M5598_RS14000 PF00186 Dihydrofolate reductase M5598_RS14005 PF12821 Threonine/Serine exporter, ThrE M5598_RS14010 PF06738 Putative threonine/serine exporter M5598_RS14015 PF01018 GTP1/OBG M5598_RS14015 PF01926 50S ribosome-binding GTPase M5598_RS14020 PF01016 Ribosomal L27 protein M5598_RS14025 PF00829 Ribosomal prokaryotic L21 protein M5598_RS14030 PF00348 Polyprenyl synthetase M5598_RS14040 PF00056 lactate/malate dehydrogenase, NAD binding domain M5598_RS14040 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M5598_RS14045 PF01316 Arginine repressor, DNA binding domain M5598_RS14045 PF02863 Arginine repressor, C-terminal domain M5598_RS14050 PF16868 NMT1-like family M5598_RS14065 PF00005 ABC transporter M5598_RS14070 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS14080 PF02441 Flavoprotein M5598_RS14085 PF01225 Mur ligase family, catalytic domain M5598_RS14085 PF02875 Mur ligase family, glutamate ligase domain M5598_RS14085 PF08245 Mur ligase middle domain M5598_RS14090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M5598_RS14095 PF00719 Inorganic pyrophosphatase M5598_RS14105 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like M5598_RS14110 PF04357 TamB, inner membrane protein subunit of TAM complex M5598_RS14115 PF01103 Surface antigen M5598_RS14115 PF17243 POTRA domain TamA domain 1 M5598_RS14120 PF01625 Peptide methionine sulfoxide reductase M5598_RS14125 PF06526 Protein of unknown function (DUF1107) M5598_RS14130 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) M5598_RS14135 PF10795 Protein of unknown function (DUF2607) M5598_RS14145 PF00005 ABC transporter M5598_RS14170 PF02080 TrkA-C domain M5598_RS14170 PF03600 Citrate transporter M5598_RS14175 PF00009 Elongation factor Tu GTP binding domain M5598_RS14180 PF01507 Phosphoadenosine phosphosulfate reductase family M5598_RS14185 PF10414 Sirohaem synthase dimerisation region M5598_RS14185 PF14824 Sirohaem biosynthesis protein central M5598_RS14185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M5598_RS14190 PF02872 5'-nucleotidase, C-terminal domain M5598_RS14190 PF00149 Calcineurin-like phosphoesterase M5598_RS14205 PF03880 DbpA RNA binding domain M5598_RS14205 PF00270 DEAD/DEAH box helicase M5598_RS14205 PF00271 Helicase conserved C-terminal domain M5598_RS14210 PF13673 Acetyltransferase (GNAT) domain M5598_RS14220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M5598_RS14220 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M5598_RS14230 PF01196 Ribosomal protein L17 M5598_RS14235 PF01000 RNA polymerase Rpb3/RpoA insert domain M5598_RS14235 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M5598_RS14235 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M5598_RS14240 PF00163 Ribosomal protein S4/S9 N-terminal domain M5598_RS14240 PF01479 S4 domain M5598_RS14245 PF00411 Ribosomal protein S11 M5598_RS14250 PF00416 Ribosomal protein S13/S18 M5598_RS14255 PF00444 Ribosomal protein L36 M5598_RS14260 PF00344 SecY translocase M5598_RS14265 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M5598_RS14270 PF00327 Ribosomal protein L30p/L7e M5598_RS14275 PF00333 Ribosomal protein S5, N-terminal domain M5598_RS14275 PF03719 Ribosomal protein S5, C-terminal domain M5598_RS14280 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M5598_RS14285 PF00347 Ribosomal protein L6 M5598_RS14290 PF00410 Ribosomal protein S8 M5598_RS14295 PF00253 Ribosomal protein S14p/S29e M5598_RS14300 PF00281 Ribosomal protein L5 M5598_RS14300 PF00673 ribosomal L5P family C-terminus M5598_RS14305 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M5598_RS14305 PF00467 KOW motif M5598_RS14310 PF00238 Ribosomal protein L14p/L23e M5598_RS14315 PF00366 Ribosomal protein S17 M5598_RS14320 PF00831 Ribosomal L29 protein M5598_RS14325 PF00252 Ribosomal protein L16p/L10e M5598_RS14330 PF00189 Ribosomal protein S3, C-terminal domain M5598_RS14330 PF07650 KH domain M5598_RS14335 PF00237 Ribosomal protein L22p/L17e M5598_RS14340 PF00203 Ribosomal protein S19 M5598_RS14345 PF00181 Ribosomal Proteins L2, RNA binding domain M5598_RS14345 PF03947 Ribosomal Proteins L2, C-terminal domain M5598_RS14350 PF00276 Ribosomal protein L23 M5598_RS14355 PF00573 Ribosomal protein L4/L1 family M5598_RS14360 PF00297 Ribosomal protein L3 M5598_RS14365 PF00338 Ribosomal protein S10p/S20e M5598_RS14370 PF01197 Ribosomal protein L31 M5598_RS14375 PF00270 DEAD/DEAH box helicase M5598_RS14375 PF00271 Helicase conserved C-terminal domain M5598_RS14375 PF18074 Primosomal protein N C-terminal domain M5598_RS14375 PF17764 3′ DNA-binding domain (3′BD) M5598_RS14375 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M5598_RS14380 PF00356 Bacterial regulatory proteins, lacI family M5598_RS14390 PF00227 Proteasome subunit M5598_RS14395 PF07724 AAA domain (Cdc48 subfamily) M5598_RS14395 PF00004 ATPase family associated with various cellular activities (AAA) M5598_RS14400 PF01040 UbiA prenyltransferase family M5598_RS14405 PF03737 Aldolase/RraA M5598_RS14410 PF06005 Cell division protein ZapB M5598_RS14415 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M5598_RS14420 PF08220 DeoR-like helix-turn-helix domain M5598_RS14420 PF00455 DeoR C terminal sensor domain M5598_RS14440 PF00121 Triosephosphate isomerase M5598_RS14445 PF00483 Nucleotidyl transferase M5598_RS14450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M5598_RS14450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M5598_RS14450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M5598_RS14465 PF00535 Glycosyl transferase family 2 M5598_RS14475 PF02080 TrkA-C domain M5598_RS14475 PF03600 Citrate transporter M5598_RS14505 PF00535 Glycosyl transferase family 2 M5598_RS14515 PF00483 Nucleotidyl transferase M5598_RS14530 PF16363 GDP-mannose 4,6 dehydratase M5598_RS14535 PF04321 RmlD substrate binding domain M5598_RS14540 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M5598_RS14545 PF00483 Nucleotidyl transferase M5598_RS14555 PF00005 ABC transporter M5598_RS14560 PF01061 ABC-2 type transporter M5598_RS14565 PF02563 Polysaccharide biosynthesis/export protein M5598_RS14565 PF10531 SLBB domain M5598_RS14570 PF00953 Glycosyl transferase family 4 M5598_RS14585 PF00263 Bacterial type II and III secretion system protein M5598_RS14585 PF03958 Bacterial type II/III secretion system short domain M5598_RS14605 PF03934 Type II secretion system (T2SS), protein K M5598_RS14620 PF01507 Phosphoadenosine phosphosulfate reductase family M5598_RS14635 PF00009 Elongation factor Tu GTP binding domain M5598_RS14640 PF00953 Glycosyl transferase family 4 M5598_RS14655 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF M5598_RS14665 PF06082 Exopolysaccharide biosynthesis protein YbjH M5598_RS14670 PF01370 NAD dependent epimerase/dehydratase family M5598_RS14675 PF03279 Bacterial lipid A biosynthesis acyltransferase M5598_RS14680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M5598_RS14685 PF00534 Glycosyl transferases group 1 M5598_RS14685 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M5598_RS14690 PF07922 Glycosyltransferase family 52 M5598_RS14695 PF02348 Cytidylyltransferase M5598_RS14700 PF00483 Nucleotidyl transferase M5598_RS14710 PF03102 NeuB family M5598_RS14710 PF08666 SAF domain M5598_RS14715 PF02350 UDP-N-acetylglucosamine 2-epimerase M5598_RS14720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M5598_RS14725 PF02719 Polysaccharide biosynthesis protein M5598_RS14735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M5598_RS14750 PF16363 GDP-mannose 4,6 dehydratase M5598_RS14760 PF01219 Prokaryotic diacylglycerol kinase M5598_RS14765 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M5598_RS14770 PF00535 Glycosyl transferase family 2 M5598_RS14775 PF00535 Glycosyl transferase family 2 M5598_RS14780 PF01467 Cytidylyltransferase-like M5598_RS14785 PF05686 Glycosyl transferase family 90 M5598_RS14795 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M5598_RS14795 PF06827 Zinc finger found in FPG and IleRS M5598_RS14795 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M5598_RS14805 PF00471 Ribosomal protein L33 M5598_RS14810 PF00830 Ribosomal L28 family M5598_RS14815 PF04002 RadC-like JAB domain M5598_RS14820 PF00672 HAMP domain M5598_RS14820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS14820 PF17200 Single Cache domain 2 M5598_RS14825 PF04127 DNA / pantothenate metabolism flavoprotein M5598_RS14825 PF02441 Flavoprotein M5598_RS14830 PF00440 Bacterial regulatory proteins, tetR family M5598_RS14835 PF03279 Bacterial lipid A biosynthesis acyltransferase M5598_RS14840 PF00156 Phosphoribosyl transferase domain M5598_RS14845 PF01138 3' exoribonuclease family, domain 1 M5598_RS14845 PF03725 3' exoribonuclease family, domain 2 M5598_RS14850 PF03755 YicC-like family, N-terminal region M5598_RS14850 PF08340 Domain of unknown function (DUF1732) M5598_RS14860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS14860 PF00005 ABC transporter M5598_RS14865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS14865 PF00005 ABC transporter M5598_RS14870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS14875 PF12911 N-terminal TM domain of oligopeptide transport permease C M5598_RS14875 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS14880 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS14885 PF07715 TonB-dependent Receptor Plug Domain M5598_RS14885 PF00593 TonB dependent receptor M5598_RS14900 PF01618 MotA/TolQ/ExbB proton channel family M5598_RS14905 PF02472 Biopolymer transport protein ExbD/TolR M5598_RS14920 PF00625 Guanylate kinase M5598_RS14925 PF01192 RNA polymerase Rpb6 M5598_RS14930 PF02824 TGS domain M5598_RS14930 PF04607 Region found in RelA / SpoT proteins M5598_RS14930 PF13291 ACT domain M5598_RS14935 PF00588 SpoU rRNA Methylase family M5598_RS14935 PF12105 SpoU, rRNA methylase, C-terminal M5598_RS14940 PF17191 RecG wedge domain M5598_RS14940 PF00270 DEAD/DEAH box helicase M5598_RS14940 PF00271 Helicase conserved C-terminal domain M5598_RS14945 PF00860 Permease family M5598_RS14950 PF00672 HAMP domain M5598_RS14950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS14950 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS14955 PF00486 Transcriptional regulatory protein, C terminal M5598_RS14955 PF00072 Response regulator receiver domain M5598_RS14965 PF03449 Transcription elongation factor, N-terminal M5598_RS14965 PF01272 Transcription elongation factor, GreA/GreB, C-term M5598_RS14975 PF16921 Tex protein YqgF-like domain M5598_RS14975 PF09371 Tex-like protein N-terminal domain M5598_RS14975 PF17674 HHH domain M5598_RS14975 PF00575 S1 RNA binding domain M5598_RS14985 PF00561 alpha/beta hydrolase fold M5598_RS14990 PF00156 Phosphoribosyl transferase domain M5598_RS14995 PF01521 Iron-sulphur cluster biosynthesis M5598_RS14995 PF01106 NifU-like domain M5598_RS15000 PF00293 NUDIX domain M5598_RS15005 PF00459 Inositol monophosphatase family M5598_RS15010 PF01203 Type II secretion system (T2SS), protein N M5598_RS15015 PF04612 Type II secretion system (T2SS), protein M M5598_RS15020 PF05134 Type II secretion system (T2SS), protein L M5598_RS15020 PF12693 GspL periplasmic domain M5598_RS15025 PF03934 Type II secretion system (T2SS), protein K M5598_RS15030 PF07963 Prokaryotic N-terminal methylation motif M5598_RS15030 PF11612 Type II secretion system (T2SS), protein J M5598_RS15035 PF07963 Prokaryotic N-terminal methylation motif M5598_RS15035 PF02501 Type II secretion system (T2SS), protein I M5598_RS15040 PF12019 Type II transport protein GspH M5598_RS15045 PF08334 Type II secretion system (T2SS), protein G M5598_RS15045 PF07963 Prokaryotic N-terminal methylation motif M5598_RS15050 PF00482 Type II secretion system (T2SS), protein F M5598_RS15055 PF00437 Type II/IV secretion system protein M5598_RS15060 PF03958 Bacterial type II/III secretion system short domain M5598_RS15060 PF00263 Bacterial type II and III secretion system protein M5598_RS15065 PF11356 Type II secretion system protein C M5598_RS15070 PF01479 S4 domain M5598_RS15075 PF01430 Hsp33 protein M5598_RS15080 PF01293 Phosphoenolpyruvate carboxykinase M5598_RS15090 PF00583 Acetyltransferase (GNAT) family M5598_RS15090 PF09500 Putative thioesterase (yiiD_Cterm) M5598_RS15095 PF02580 D-Tyr-tRNA(Tyr) deacylase M5598_RS15100 PF03631 Virulence factor BrkB M5598_RS15115 PF00679 Elongation factor G C-terminus M5598_RS15115 PF00009 Elongation factor Tu GTP binding domain M5598_RS15115 PF03144 Elongation factor Tu domain 2 M5598_RS15120 PF00120 Glutamine synthetase, catalytic domain M5598_RS15120 PF03951 Glutamine synthetase, beta-Grasp domain M5598_RS15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS15130 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS15130 PF00989 PAS fold M5598_RS15135 PF00072 Response regulator receiver domain M5598_RS15135 PF00158 Sigma-54 interaction domain M5598_RS15135 PF02954 Bacterial regulatory protein, Fis family M5598_RS15140 PF00563 EAL domain M5598_RS15140 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS15140 PF03707 Bacterial signalling protein N terminal repeat M5598_RS15145 PF00962 Adenosine/AMP deaminase M5598_RS15150 PF04055 Radical SAM superfamily M5598_RS15150 PF06969 HemN C-terminal domain M5598_RS15155 PF10675 Protein of unknown function (DUF2489) M5598_RS15160 PF04220 Der GTPase activator (YihI) M5598_RS15170 PF00034 Cytochrome c M5598_RS15175 PF01926 50S ribosome-binding GTPase M5598_RS15180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M5598_RS15180 PF01367 5'-3' exonuclease, C-terminal SAM fold M5598_RS15180 PF00476 DNA polymerase family A M5598_RS15180 PF01612 3'-5' exonuclease M5598_RS15190 PF00490 Delta-aminolevulinic acid dehydratase M5598_RS15195 PF01026 TatD related DNase M5598_RS15205 PF00902 Sec-independent protein translocase protein (TatC) M5598_RS15210 PF02416 mttA/Hcf106 family M5598_RS15215 PF02416 mttA/Hcf106 family M5598_RS15220 PF03109 ABC1 family M5598_RS15225 PF02036 SCP-2 sterol transfer family M5598_RS15230 PF01209 ubiE/COQ5 methyltransferase family M5598_RS15235 PF02646 RmuC family M5598_RS15245 PF00563 EAL domain M5598_RS15245 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS15245 PF03707 Bacterial signalling protein N terminal repeat M5598_RS15250 PF01594 AI-2E family transporter M5598_RS15300 PF04972 BON domain M5598_RS15305 PF00158 Sigma-54 interaction domain M5598_RS15305 PF02954 Bacterial regulatory protein, Fis family M5598_RS15305 PF01590 GAF domain M5598_RS15315 PF10625 Universal stress protein B (UspB) M5598_RS15320 PF00210 Ferritin-like domain M5598_RS15325 PF00582 Universal stress protein family M5598_RS15330 PF00892 EamA-like transporter family M5598_RS15340 PF04445 Putative SAM-dependent methyltransferase M5598_RS15345 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS15345 PF08448 PAS fold M5598_RS15345 PF00563 EAL domain M5598_RS15350 PF01037 Lrp/AsnC ligand binding domain M5598_RS15355 PF01432 Peptidase family M3 M5598_RS15360 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M5598_RS15365 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS15365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5598_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS15370 PF03466 LysR substrate binding domain M5598_RS15375 PF01048 Phosphorylase superfamily M5598_RS15380 PF01081 KDPG and KHG aldolase M5598_RS15385 PF02447 GntP family permease M5598_RS15390 PF01202 Shikimate kinase M5598_RS15395 PF00920 Dehydratase family M5598_RS15400 PF00893 Small Multidrug Resistance protein M5598_RS15405 PF00893 Small Multidrug Resistance protein M5598_RS15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS15410 PF03466 LysR substrate binding domain M5598_RS15415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M5598_RS15415 PF00356 Bacterial regulatory proteins, lacI family M5598_RS15420 PF00069 Protein kinase domain M5598_RS15450 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS15450 PF12911 N-terminal TM domain of oligopeptide transport permease C M5598_RS15455 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS15460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS15465 PF00005 ABC transporter M5598_RS15465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS15470 PF13419 Haloacid dehalogenase-like hydrolase M5598_RS15500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M5598_RS15505 PF00580 UvrD/REP helicase N-terminal domain M5598_RS15505 PF13361 UvrD-like helicase C-terminal domain M5598_RS15510 PF00440 Bacterial regulatory proteins, tetR family M5598_RS15510 PF16295 Tetracyclin repressor-like, C-terminal domain M5598_RS15515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS15520 PF00873 AcrB/AcrD/AcrF family M5598_RS15525 PF04380 Membrane fusogenic activity M5598_RS15530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M5598_RS15530 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M5598_RS15535 PF03466 LysR substrate binding domain M5598_RS15535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS15570 PF00132 Bacterial transferase hexapeptide (six repeats) M5598_RS15575 PF07369 Protein of unknown function (DUF1488) M5598_RS15580 PF08501 Shikimate dehydrogenase substrate binding domain M5598_RS15580 PF01488 Shikimate / quinate 5-dehydrogenase M5598_RS15580 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M5598_RS15585 PF01218 Coproporphyrinogen III oxidase M5598_RS15590 PF01300 Telomere recombination M5598_RS15595 PF00731 AIR carboxylase M5598_RS15600 PF02222 ATP-grasp domain M5598_RS15600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M5598_RS15605 PF01396 Topoisomerase DNA binding C4 zinc finger M5598_RS15610 PF04361 Protein of unknown function (DUF494) M5598_RS15615 PF17782 DprA winged helix domain M5598_RS15615 PF02481 DNA recombination-mediator protein A M5598_RS15625 PF01327 Polypeptide deformylase M5598_RS15630 PF00551 Formyl transferase M5598_RS15630 PF02911 Formyl transferase, C-terminal domain M5598_RS15635 PF01029 NusB family M5598_RS15635 PF01189 16S rRNA methyltransferase RsmB/F M5598_RS15640 PF02254 TrkA-N domain M5598_RS15640 PF02080 TrkA-C domain M5598_RS15645 PF02386 Cation transport protein M5598_RS15655 PF03006 Haemolysin-III related M5598_RS15660 PF07070 SpoOM protein M5598_RS15670 PF06288 Protein of unknown function (DUF1040) M5598_RS15675 PF12801 4Fe-4S binding domain M5598_RS15675 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase M5598_RS15675 PF13746 4Fe-4S dicluster domain M5598_RS15680 PF01636 Phosphotransferase enzyme family M5598_RS15685 PF01323 DSBA-like thioredoxin domain M5598_RS15690 PF01553 Acyltransferase M5598_RS15700 PF13335 Magnesium chelatase, subunit ChlI C-terminal M5598_RS15700 PF01078 Magnesium chelatase, subunit ChlI M5598_RS15705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M5598_RS15705 PF00205 Thiamine pyrophosphate enzyme, central domain M5598_RS15705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M5598_RS15715 PF01063 Amino-transferase class IV M5598_RS15720 PF00920 Dehydratase family M5598_RS15725 PF00585 C-terminal regulatory domain of Threonine dehydratase M5598_RS15725 PF00291 Pyridoxal-phosphate dependent enzyme M5598_RS15730 PF03466 LysR substrate binding domain M5598_RS15730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS15735 PF07690 Major Facilitator Superfamily M5598_RS15740 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS15745 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS15750 PF12804 MobA-like NTP transferase domain M5598_RS15750 PF00132 Bacterial transferase hexapeptide (six repeats) M5598_RS15755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M5598_RS15755 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M5598_RS15760 PF02874 ATP synthase alpha/beta family, beta-barrel domain M5598_RS15760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5598_RS15765 PF00231 ATP synthase M5598_RS15770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5598_RS15770 PF00306 ATP synthase alpha/beta chain, C terminal domain M5598_RS15770 PF02874 ATP synthase alpha/beta family, beta-barrel domain M5598_RS15775 PF00213 ATP synthase delta (OSCP) subunit M5598_RS15780 PF00430 ATP synthase B/B' CF(0) M5598_RS15785 PF00137 ATP synthase subunit C M5598_RS15790 PF00119 ATP synthase A chain M5598_RS15795 PF03899 ATP synthase I chain M5598_RS15800 PF17762 HTH domain found in ParB protein M5598_RS15800 PF02195 ParB-like nuclease domain M5598_RS15805 PF13614 AAA domain M5598_RS15810 PF02527 rRNA small subunit methyltransferase G M5598_RS15815 PF13932 GidA associated domain M5598_RS15815 PF01134 Glucose inhibited division protein A M5598_RS15820 PF00258 Flavodoxin M5598_RS15825 PF10396 GTP-binding protein TrmE N-terminus M5598_RS15825 PF01926 50S ribosome-binding GTPase M5598_RS15825 PF12631 MnmE helical domain M5598_RS15830 PF02096 60Kd inner membrane protein M5598_RS15830 PF14849 YidC periplasmic domain M5598_RS15835 PF01809 Putative membrane protein insertion efficiency factor M5598_RS15840 PF00825 Ribonuclease P M5598_RS15845 PF00468 Ribosomal protein L34 M5598_RS15850 PF00005 ABC transporter M5598_RS15855 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS15860 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS15865 PF02887 Pyruvate kinase, alpha/beta domain M5598_RS15865 PF00224 Pyruvate kinase, barrel domain M5598_RS15870 PF00005 ABC transporter M5598_RS15875 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS15880 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS15885 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS15890 PF00563 EAL domain M5598_RS15890 PF01590 GAF domain M5598_RS15890 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS15890 PF00989 PAS fold M5598_RS15905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M5598_RS15905 PF00356 Bacterial regulatory proteins, lacI family M5598_RS15910 PF00381 PTS HPr component phosphorylation site M5598_RS15910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5598_RS15915 PF00294 pfkB family carbohydrate kinase M5598_RS15920 PF02378 Phosphotransferase system, EIIC M5598_RS15920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5598_RS15930 PF00873 AcrB/AcrD/AcrF family M5598_RS15950 PF08669 Glycine cleavage T-protein C-terminal barrel domain M5598_RS15950 PF01571 Aminomethyltransferase folate-binding domain M5598_RS15960 PF00464 Serine hydroxymethyltransferase M5598_RS15965 PF01597 Glycine cleavage H-protein M5598_RS15970 PF02347 Glycine cleavage system P-protein M5598_RS16005 PF17848 Acetyl-coA carboxylase zinc finger domain M5598_RS16005 PF01039 Carboxyl transferase domain M5598_RS16010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS16010 PF03466 LysR substrate binding domain M5598_RS16015 PF02811 PHP domain M5598_RS16015 PF14579 Helix-hairpin-helix motif M5598_RS16015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M5598_RS16015 PF07733 Bacterial DNA polymerase III alpha NTPase domain M5598_RS16015 PF00929 Exonuclease M5598_RS16015 PF11490 DNA polymerase III polC-type N-terminus II M5598_RS16020 PF00664 ABC transporter transmembrane region M5598_RS16020 PF00005 ABC transporter M5598_RS16040 PF02253 Phospholipase A1 M5598_RS16050 PF00376 MerR family regulatory protein M5598_RS16050 PF09278 MerR, DNA binding M5598_RS16055 PF01327 Polypeptide deformylase M5598_RS16085 PF00571 CBS domain M5598_RS16085 PF01769 Divalent cation transporter M5598_RS16085 PF03448 MgtE intracellular N domain M5598_RS16105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5598_RS16110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M5598_RS16120 PF01757 Acyltransferase family M5598_RS16130 PF09722 Protein of unknown function (DUF2384) M5598_RS16135 PF00141 Peroxidase M5598_RS16140 PF13187 4Fe-4S dicluster domain M5598_RS16140 PF01645 Conserved region in glutamate synthase M5598_RS16150 PF12431 Transcriptional regulator M5598_RS16150 PF00072 Response regulator receiver domain M5598_RS16155 PF17203 Single cache domain 3 M5598_RS16155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS16155 PF00989 PAS fold M5598_RS16155 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M5598_RS16160 PF00939 Sodium:sulfate symporter transmembrane region M5598_RS16165 PF00171 Aldehyde dehydrogenase family M5598_RS16185 PF00892 EamA-like transporter family M5598_RS16190 PF00893 Small Multidrug Resistance protein M5598_RS16195 PF01447 Thermolysin metallopeptidase, catalytic domain M5598_RS16195 PF02868 Thermolysin metallopeptidase, alpha-helical domain M5598_RS16195 PF04151 Bacterial pre-peptidase C-terminal domain M5598_RS16195 PF07504 Fungalysin/Thermolysin Propeptide Motif M5598_RS16195 PF03413 Peptidase propeptide and YPEB domain M5598_RS16205 PF00583 Acetyltransferase (GNAT) family M5598_RS16205 PF00814 Glycoprotease family M5598_RS16215 PF03606 C4-dicarboxylate anaerobic carrier M5598_RS16220 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 M5598_RS16220 PF13542 Helix-turn-helix domain of transposase family ISL3 M5598_RS16220 PF01610 Transposase M5598_RS16225 PF04011 LemA family M5598_RS16230 PF01435 Peptidase family M48 M5598_RS16245 PF18081 Fanconi anemia-associated nuclease SAP domain M5598_RS16245 PF08774 VRR-NUC domain M5598_RS16255 PF04055 Radical SAM superfamily M5598_RS16255 PF13186 Iron-sulfur cluster-binding domain M5598_RS16270 PF04076 Bacterial OB fold (BOF) protein M5598_RS16275 PF00781 Diacylglycerol kinase catalytic domain M5598_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS16280 PF03466 LysR substrate binding domain M5598_RS16285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5598_RS16300 PF00092 von Willebrand factor type A domain M5598_RS16315 PF17863 AAA lid domain M5598_RS16315 PF07726 ATPase family associated with various cellular activities (AAA) M5598_RS16320 PF13186 Iron-sulfur cluster-binding domain M5598_RS16320 PF04055 Radical SAM superfamily M5598_RS16325 PF16385 Domain of unknown function M5598_RS16325 PF00884 Sulfatase M5598_RS16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS16330 PF03466 LysR substrate binding domain M5598_RS16340 PF00884 Sulfatase M5598_RS16345 PF16385 Domain of unknown function M5598_RS16345 PF00884 Sulfatase M5598_RS16350 PF00486 Transcriptional regulatory protein, C terminal M5598_RS16350 PF00072 Response regulator receiver domain M5598_RS16365 PF01627 Hpt domain M5598_RS16365 PF00072 Response regulator receiver domain M5598_RS16365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS16365 PF00672 HAMP domain M5598_RS16365 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS16370 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M5598_RS16375 PF02142 MGS-like domain M5598_RS16380 PF12462 DNA helicase IV / RNA helicase N terminal M5598_RS16380 PF00580 UvrD/REP helicase N-terminal domain M5598_RS16380 PF13361 UvrD-like helicase C-terminal domain M5598_RS16385 PF12805 FUSC-like inner membrane protein yccS M5598_RS16415 PF07715 TonB-dependent Receptor Plug Domain M5598_RS16415 PF00593 TonB dependent receptor M5598_RS16425 PF13411 MerR HTH family regulatory protein M5598_RS16430 PF00005 ABC transporter M5598_RS16435 PF01032 FecCD transport family M5598_RS16440 PF01032 FecCD transport family M5598_RS16445 PF01497 Periplasmic binding protein M5598_RS16455 PF01048 Phosphorylase superfamily M5598_RS16460 PF04973 Nicotinamide mononucleotide transporter M5598_RS16470 PF00356 Bacterial regulatory proteins, lacI family M5598_RS16475 PF00294 pfkB family carbohydrate kinase M5598_RS16480 PF13407 Periplasmic binding protein domain M5598_RS16485 PF02653 Branched-chain amino acid transport system / permease component M5598_RS16490 PF00005 ABC transporter M5598_RS16495 PF05025 RbsD / FucU transport protein family M5598_RS16500 PF00563 EAL domain M5598_RS16500 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS16505 PF01048 Phosphorylase superfamily M5598_RS16545 PF04116 Fatty acid hydroxylase superfamily M5598_RS16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS16560 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS16560 PF09308 LuxQ, periplasmic M5598_RS16560 PF00072 Response regulator receiver domain M5598_RS16565 PF00034 Cytochrome c M5598_RS16565 PF03150 Di-haem cytochrome c peroxidase M5598_RS16575 PF03707 Bacterial signalling protein N terminal repeat M5598_RS16575 PF13188 PAS domain M5598_RS16575 PF00563 EAL domain M5598_RS16575 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS16585 PF01145 SPFH domain / Band 7 family M5598_RS16585 PF16200 C-terminal region of band_7 M5598_RS16595 PF00881 Nitroreductase family M5598_RS16600 PF00005 ABC transporter M5598_RS16600 PF00571 CBS domain M5598_RS16605 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS16610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M5598_RS16615 PF05199 GMC oxidoreductase M5598_RS16615 PF00732 GMC oxidoreductase M5598_RS16620 PF00171 Aldehyde dehydrogenase family M5598_RS16625 PF13977 BetI-type transcriptional repressor, C-terminal M5598_RS16625 PF00440 Bacterial regulatory proteins, tetR family M5598_RS16630 PF17151 Periplasmic sensor domain M5598_RS16630 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS16640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M5598_RS16640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M5598_RS16650 PF00378 Enoyl-CoA hydratase/isomerase M5598_RS16655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5598_RS16655 PF02770 Acyl-CoA dehydrogenase, middle domain M5598_RS16655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5598_RS16660 PF00171 Aldehyde dehydrogenase family M5598_RS16665 PF02803 Thiolase, C-terminal domain M5598_RS16665 PF00108 Thiolase, N-terminal domain M5598_RS16670 PF09278 MerR, DNA binding M5598_RS16670 PF00376 MerR family regulatory protein M5598_RS16675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5598_RS16675 PF02770 Acyl-CoA dehydrogenase, middle domain M5598_RS16675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5598_RS16680 PF01039 Carboxyl transferase domain M5598_RS16685 PF00378 Enoyl-CoA hydratase/isomerase M5598_RS16690 PF02785 Biotin carboxylase C-terminal domain M5598_RS16690 PF00289 Biotin carboxylase, N-terminal domain M5598_RS16690 PF00364 Biotin-requiring enzyme M5598_RS16690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M5598_RS16695 PF00682 HMGL-like M5598_RS16700 PF00672 HAMP domain M5598_RS16700 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS16700 PF00072 Response regulator receiver domain M5598_RS16700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M5598_RS16700 PF01627 Hpt domain M5598_RS16715 PF14602 Hexapeptide repeat of succinyl-transferase M5598_RS16715 PF12464 Maltose acetyltransferase M5598_RS16720 PF00155 Aminotransferase class I and II M5598_RS16720 PF00392 Bacterial regulatory proteins, gntR family M5598_RS16725 PF01654 Cytochrome bd terminal oxidase subunit I M5598_RS16730 PF02322 Cytochrome bd terminal oxidase subunit II M5598_RS16745 PF02627 Carboxymuconolactone decarboxylase family M5598_RS16750 PF13411 MerR HTH family regulatory protein M5598_RS16760 PF00034 Cytochrome c M5598_RS16775 PF00501 AMP-binding enzyme M5598_RS16775 PF14535 AMP-binding enzyme C-terminal domain M5598_RS16780 PF00005 ABC transporter M5598_RS16805 PF00005 ABC transporter M5598_RS16805 PF12399 Branched-chain amino acid ATP-binding cassette transporter M5598_RS16815 PF01012 Electron transfer flavoprotein domain M5598_RS16820 PF01012 Electron transfer flavoprotein domain M5598_RS16820 PF00766 Electron transfer flavoprotein FAD-binding domain M5598_RS16825 PF00501 AMP-binding enzyme M5598_RS16825 PF13193 AMP-binding enzyme C-terminal domain M5598_RS17030 PF06892 Phage regulatory protein CII (CP76) M5598_RS17060 PF02899 Phage integrase, N-terminal SAM-like domain M5598_RS17060 PF00589 Phage integrase family M5598_RS17065 PF00478 IMP dehydrogenase / GMP reductase domain M5598_RS17070 PF03853 YjeF-related protein N-terminus M5598_RS17070 PF01256 Carbohydrate kinase M5598_RS17080 PF00072 Response regulator receiver domain M5598_RS17085 PF00248 Aldo/keto reductase family M5598_RS17100 PF00654 Voltage gated chloride channel M5598_RS17110 PF01566 Natural resistance-associated macrophage protein M5598_RS17115 PF01227 GTP cyclohydrolase I M5598_RS17120 PF00994 Probable molybdopterin binding domain M5598_RS17120 PF03454 MoeA C-terminal region (domain IV) M5598_RS17120 PF03453 MoeA N-terminal region (domain I and II) M5598_RS17125 PF00899 ThiF family M5598_RS17145 PF00581 Rhodanese-like domain M5598_RS17150 PF03707 Bacterial signalling protein N terminal repeat M5598_RS17150 PF00563 EAL domain M5598_RS17150 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS17155 PF00704 Glycosyl hydrolases family 18 M5598_RS17155 PF08329 Chitinase A, N-terminal domain M5598_RS17165 PF00923 Transaldolase/Fructose-6-phosphate aldolase M5598_RS17170 PF02779 Transketolase, pyrimidine binding domain M5598_RS17170 PF02780 Transketolase, C-terminal domain M5598_RS17170 PF00456 Transketolase, thiamine diphosphate binding domain M5598_RS17175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS17175 PF08447 PAS fold M5598_RS17180 PF07690 Major Facilitator Superfamily M5598_RS17185 PF00793 DAHP synthetase I family M5598_RS17190 PF00691 OmpA family M5598_RS17190 PF01389 OmpA-like transmembrane domain M5598_RS17195 PF13419 Haloacid dehalogenase-like hydrolase M5598_RS17200 PF00472 RF-1 domain M5598_RS17205 PF00672 HAMP domain M5598_RS17205 PF12729 Four helix bundle sensory module for signal transduction M5598_RS17205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS17210 PF00873 AcrB/AcrD/AcrF family M5598_RS17215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS17220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5598_RS17225 PF07687 Peptidase dimerisation domain M5598_RS17225 PF01546 Peptidase family M20/M25/M40 M5598_RS17240 PF00196 Bacterial regulatory proteins, luxR family M5598_RS17240 PF00072 Response regulator receiver domain M5598_RS17245 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M5598_RS17245 PF07730 Histidine kinase M5598_RS17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS17245 PF00672 HAMP domain M5598_RS17250 PF00037 4Fe-4S binding domain M5598_RS17250 PF12800 4Fe-4S binding domain M5598_RS17250 PF13187 4Fe-4S dicluster domain M5598_RS17260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M5598_RS17260 PF00384 Molybdopterin oxidoreductase M5598_RS17260 PF01568 Molydopterin dinucleotide binding domain M5598_RS17265 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) M5598_RS17270 PF03264 NapC/NirT cytochrome c family, N-terminal region M5598_RS17280 PF00561 alpha/beta hydrolase fold M5598_RS17280 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus M5598_RS17290 PF00108 Thiolase, N-terminal domain M5598_RS17290 PF02803 Thiolase, C-terminal domain M5598_RS17295 PF00106 short chain dehydrogenase M5598_RS17300 PF01810 LysE type translocator M5598_RS17310 PF07549 SecD/SecF GG Motif M5598_RS17310 PF02355 Protein export membrane protein M5598_RS17315 PF07549 SecD/SecF GG Motif M5598_RS17315 PF13721 SecD export protein N-terminal TM region M5598_RS17315 PF02355 Protein export membrane protein M5598_RS17340 PF01037 Lrp/AsnC ligand binding domain M5598_RS17360 PF00529 HlyD membrane-fusion protein of T1SS M5598_RS17360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS17370 PF09308 LuxQ, periplasmic M5598_RS17370 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS17370 PF00072 Response regulator receiver domain M5598_RS17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS17375 PF13407 Periplasmic binding protein domain M5598_RS17380 PF01541 GIY-YIG catalytic domain M5598_RS17385 PF04337 Protein of unknown function, DUF480 M5598_RS17395 PF04363 Protein of unknown function (DUF496) M5598_RS17400 PF01554 MatE M5598_RS17405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M5598_RS17410 PF00072 Response regulator receiver domain M5598_RS17410 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M5598_RS17410 PF00672 HAMP domain M5598_RS17410 PF01627 Hpt domain M5598_RS17410 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS17410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS17415 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M5598_RS17415 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M5598_RS17430 PF03466 LysR substrate binding domain M5598_RS17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS17435 PF13404 AsnC-type helix-turn-helix domain M5598_RS17435 PF01037 Lrp/AsnC ligand binding domain M5598_RS17440 PF13520 Amino acid permease M5598_RS17445 PF00155 Aminotransferase class I and II M5598_RS17445 PF00392 Bacterial regulatory proteins, gntR family M5598_RS17455 PF03109 ABC1 family M5598_RS17460 PF01769 Divalent cation transporter M5598_RS17460 PF03448 MgtE intracellular N domain M5598_RS17460 PF00571 CBS domain M5598_RS17465 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M5598_RS17470 PF07969 Amidohydrolase family M5598_RS17480 PF01966 HD domain M5598_RS17490 PF07690 Major Facilitator Superfamily M5598_RS17500 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M5598_RS17505 PF00255 Glutathione peroxidase M5598_RS17520 PF01323 DSBA-like thioredoxin domain M5598_RS17535 PF00106 short chain dehydrogenase M5598_RS17540 PF00072 Response regulator receiver domain M5598_RS17540 PF00486 Transcriptional regulatory protein, C terminal M5598_RS17545 PF00672 HAMP domain M5598_RS17545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS17545 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS17555 PF01219 Prokaryotic diacylglycerol kinase M5598_RS17560 PF00884 Sulfatase M5598_RS17560 PF08019 Phosphoethanolamine transferase EptA/EptB M5598_RS17565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M5598_RS17595 PF01047 MarR family M5598_RS17605 PF01734 Patatin-like phospholipase M5598_RS17610 PF05726 Pirin C-terminal cupin domain M5598_RS17610 PF02678 Pirin M5598_RS17615 PF00313 'Cold-shock' DNA-binding domain M5598_RS17630 PF00962 Adenosine/AMP deaminase M5598_RS17635 PF00462 Glutaredoxin M5598_RS17635 PF08534 Redoxin M5598_RS17645 PF00768 D-alanyl-D-alanine carboxypeptidase M5598_RS17645 PF07943 Penicillin-binding protein 5, C-terminal domain M5598_RS17650 PF02798 Glutathione S-transferase, N-terminal domain M5598_RS17655 PF08244 Glycosyl hydrolases family 32 C terminal M5598_RS17655 PF00251 Glycosyl hydrolases family 32 N-terminal domain M5598_RS17660 PF00294 pfkB family carbohydrate kinase M5598_RS17665 PF00367 phosphotransferase system, EIIB M5598_RS17665 PF02378 Phosphotransferase system, EIIC M5598_RS17670 PF00356 Bacterial regulatory proteins, lacI family M5598_RS17675 PF02264 LamB porin M5598_RS17675 PF11471 Maltoporin periplasmic N-terminal extension M5598_RS17720 PF12833 Helix-turn-helix domain M5598_RS17720 PF01497 Periplasmic binding protein M5598_RS17725 PF00155 Aminotransferase class I and II M5598_RS17745 PF00271 Helicase conserved C-terminal domain M5598_RS17745 PF00270 DEAD/DEAH box helicase M5598_RS17755 PF03466 LysR substrate binding domain M5598_RS17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS17760 PF03466 LysR substrate binding domain M5598_RS17760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS17770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M5598_RS17775 PF08240 Alcohol dehydrogenase GroES-like domain M5598_RS17775 PF00107 Zinc-binding dehydrogenase M5598_RS17790 PF12833 Helix-turn-helix domain M5598_RS17790 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M5598_RS17795 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M5598_RS17810 PF03466 LysR substrate binding domain M5598_RS17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS17815 PF00709 Adenylosuccinate synthetase M5598_RS17820 PF01610 Transposase M5598_RS17820 PF13542 Helix-turn-helix domain of transposase family ISL3 M5598_RS17820 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 M5598_RS17825 PF17763 Glutaminase/Asparaginase C-terminal domain M5598_RS17825 PF00710 Asparaginase, N-terminal M5598_RS17830 PF03618 Kinase/pyrophosphorylase M5598_RS17835 PF02896 PEP-utilising enzyme, TIM barrel domain M5598_RS17835 PF00391 PEP-utilising enzyme, mobile domain M5598_RS17835 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M5598_RS17850 PF00579 tRNA synthetases class I (W and Y) M5598_RS17855 PF13416 Bacterial extracellular solute-binding protein M5598_RS17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS17865 PF03466 LysR substrate binding domain M5598_RS17870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS17875 PF00873 AcrB/AcrD/AcrF family M5598_RS17890 PF07694 5TMR of 5TMR-LYT M5598_RS17890 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS17900 PF00196 Bacterial regulatory proteins, luxR family M5598_RS17905 PF02837 Glycosyl hydrolases family 2, sugar binding domain M5598_RS17905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M5598_RS17905 PF00703 Glycosyl hydrolases family 2 M5598_RS17905 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M5598_RS17910 PF02028 BCCT, betaine/carnitine/choline family transporter M5598_RS17915 PF07702 UTRA domain M5598_RS17915 PF00392 Bacterial regulatory proteins, gntR family M5598_RS17940 PF08402 TOBE domain M5598_RS17940 PF00005 ABC transporter M5598_RS17980 PF00873 AcrB/AcrD/AcrF family M5598_RS17985 PF13533 Biotin-lipoyl like M5598_RS17990 PF13091 PLD-like domain M5598_RS18015 PF00376 MerR family regulatory protein M5598_RS18015 PF09278 MerR, DNA binding M5598_RS18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS18025 PF03466 LysR substrate binding domain M5598_RS18035 PF13378 Enolase C-terminal domain-like M5598_RS18035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M5598_RS18040 PF00679 Elongation factor G C-terminus M5598_RS18040 PF14492 Elongation Factor G, domain II M5598_RS18040 PF00009 Elongation factor Tu GTP binding domain M5598_RS18040 PF03144 Elongation factor Tu domain 2 M5598_RS18040 PF03764 Elongation factor G, domain IV M5598_RS18065 PF02001 Protein of unknown function DUF134 M5598_RS18070 PF17185 NlpE C-terminal OB domain M5598_RS18070 PF04170 NlpE N-terminal domain M5598_RS18075 PF06629 MltA-interacting protein MipA M5598_RS18085 PF01389 OmpA-like transmembrane domain M5598_RS18085 PF00691 OmpA family M5598_RS18090 PF03466 LysR substrate binding domain M5598_RS18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS18110 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M5598_RS18110 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M5598_RS18120 PF00857 Isochorismatase family M5598_RS18130 PF06628 Catalase-related immune-responsive M5598_RS18130 PF00199 Catalase M5598_RS18140 PF08220 DeoR-like helix-turn-helix domain M5598_RS18140 PF00455 DeoR C terminal sensor domain M5598_RS18145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5598_RS18150 PF01625 Peptide methionine sulfoxide reductase M5598_RS18150 PF01641 SelR domain M5598_RS18165 PF07971 Glycosyl hydrolase family 92 M5598_RS18165 PF17678 Glycosyl hydrolase family 92 N-terminal domain M5598_RS18170 PF07971 Glycosyl hydrolase family 92 M5598_RS18170 PF17678 Glycosyl hydrolase family 92 N-terminal domain M5598_RS18180 PF07971 Glycosyl hydrolase family 92 M5598_RS18180 PF17678 Glycosyl hydrolase family 92 N-terminal domain M5598_RS18185 PF07971 Glycosyl hydrolase family 92 M5598_RS18185 PF17678 Glycosyl hydrolase family 92 N-terminal domain M5598_RS18190 PF03060 Nitronate monooxygenase M5598_RS18195 PF00149 Calcineurin-like phosphoesterase M5598_RS18195 PF02872 5'-nucleotidase, C-terminal domain M5598_RS18205 PF08359 YsiA-like protein, C-terminal region M5598_RS18205 PF00440 Bacterial regulatory proteins, tetR family M5598_RS18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS18220 PF03466 LysR substrate binding domain M5598_RS18225 PF01810 LysE type translocator M5598_RS18240 PF00118 TCP-1/cpn60 chaperonin family M5598_RS18245 PF00166 Chaperonin 10 Kd subunit M5598_RS18250 PF00581 Rhodanese-like domain M5598_RS18265 PF01070 FMN-dependent dehydrogenase M5598_RS18285 PF00669 Bacterial flagellin N-terminal helical region M5598_RS18295 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M5598_RS18295 PF10135 Rod binding protein M5598_RS18300 PF02119 Flagellar P-ring protein M5598_RS18305 PF02107 Flagellar L-ring protein M5598_RS18310 PF00460 Flagella basal body rod protein M5598_RS18310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS18315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS18315 PF00460 Flagella basal body rod protein M5598_RS18320 PF07559 Flagellar basal body protein FlaE M5598_RS18320 PF00460 Flagella basal body rod protein M5598_RS18320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS18325 PF13860 FlgD Ig-like domain M5598_RS18325 PF13861 FlgD Tudor-like domain M5598_RS18325 PF03963 Flagellar hook capping protein - N-terminal region M5598_RS18330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5598_RS18330 PF00460 Flagella basal body rod protein M5598_RS18335 PF00460 Flagella basal body rod protein M5598_RS18355 PF01464 Transglycosylase SLT domain M5598_RS18360 PF08264 Anticodon-binding domain of tRNA M5598_RS18360 PF00133 tRNA synthetases class I (I, L, M and V) M5598_RS18380 PF03313 Serine dehydratase alpha chain M5598_RS18380 PF03315 Serine dehydratase beta chain M5598_RS18385 PF00854 POT family M5598_RS18395 PF03466 LysR substrate binding domain M5598_RS18395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS18405 PF03466 LysR substrate binding domain M5598_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS18410 PF00691 OmpA family M5598_RS18410 PF01389 OmpA-like transmembrane domain M5598_RS18415 PF18027 Cytosolic carboxypeptidase N-terminal domain M5598_RS18415 PF00246 Zinc carboxypeptidase M5598_RS18420 PF01266 FAD dependent oxidoreductase M5598_RS18445 PF07702 UTRA domain M5598_RS18445 PF00392 Bacterial regulatory proteins, gntR family M5598_RS18450 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS18455 PF00005 ABC transporter M5598_RS18470 PF00266 Aminotransferase class-V M5598_RS18475 PF00202 Aminotransferase class-III M5598_RS18480 PF13419 Haloacid dehalogenase-like hydrolase M5598_RS18485 PF00356 Bacterial regulatory proteins, lacI family M5598_RS18490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5598_RS18500 PF03611 PTS system sugar-specific permease component M5598_RS18510 PF05922 Peptidase inhibitor I9 M5598_RS18510 PF00082 Subtilase family M5598_RS18515 PF00657 GDSL-like Lipase/Acylhydrolase M5598_RS18520 PF02321 Outer membrane efflux protein M5598_RS18525 PF02687 FtsX-like permease family M5598_RS18525 PF12704 MacB-like periplasmic core domain M5598_RS18525 PF00005 ABC transporter M5598_RS18530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS18535 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M5598_RS18540 PF00194 Eukaryotic-type carbonic anhydrase M5598_RS18545 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) M5598_RS18560 PF13419 Haloacid dehalogenase-like hydrolase M5598_RS18565 PF03466 LysR substrate binding domain M5598_RS18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS18600 PF14602 Hexapeptide repeat of succinyl-transferase M5598_RS18600 PF12464 Maltose acetyltransferase M5598_RS18605 PF02566 OsmC-like protein M5598_RS18610 PF01641 SelR domain M5598_RS18610 PF01625 Peptide methionine sulfoxide reductase M5598_RS18625 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M5598_RS18630 PF00875 DNA photolyase M5598_RS18630 PF03441 FAD binding domain of DNA photolyase M5598_RS18635 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS18650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS18650 PF00672 HAMP domain M5598_RS18650 PF12729 Four helix bundle sensory module for signal transduction M5598_RS18655 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS18655 PF05230 MASE2 domain M5598_RS18670 PF07670 Nucleoside recognition M5598_RS18670 PF01773 Na+ dependent nucleoside transporter N-terminus M5598_RS18670 PF07662 Na+ dependent nucleoside transporter C-terminus M5598_RS18685 PF01212 Beta-eliminating lyase M5598_RS18695 PF01266 FAD dependent oxidoreductase M5598_RS18710 PF05525 Branched-chain amino acid transport protein M5598_RS18715 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS18715 PF08448 PAS fold M5598_RS18720 PF00158 Sigma-54 interaction domain M5598_RS18720 PF00072 Response regulator receiver domain M5598_RS18720 PF02954 Bacterial regulatory protein, Fis family M5598_RS18725 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS18735 PF00232 Glycosyl hydrolase family 1 M5598_RS18750 PF01610 Transposase M5598_RS18750 PF13542 Helix-turn-helix domain of transposase family ISL3 M5598_RS18750 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 M5598_RS18765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS18765 PF03466 LysR substrate binding domain M5598_RS18770 PF18030 RimK PreATP-grasp domain M5598_RS18770 PF08443 RimK-like ATP-grasp domain M5598_RS18775 PF18030 RimK PreATP-grasp domain M5598_RS18775 PF08443 RimK-like ATP-grasp domain M5598_RS18780 PF00753 Metallo-beta-lactamase superfamily M5598_RS18785 PF17944 Arginine decarboxylase C-terminal helical extension M5598_RS18785 PF17810 Arginine decarboxylase helical bundle domain M5598_RS18785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M5598_RS18790 PF00491 Arginase family M5598_RS18795 PF07690 Major Facilitator Superfamily M5598_RS18800 PF00326 Prolyl oligopeptidase family M5598_RS18800 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M5598_RS18815 PF00950 ABC 3 transport family M5598_RS18820 PF00005 ABC transporter M5598_RS18825 PF01297 Zinc-uptake complex component A periplasmic M5598_RS18865 PF02472 Biopolymer transport protein ExbD/TolR M5598_RS18870 PF01618 MotA/TolQ/ExbB proton channel family M5598_RS18875 PF01618 MotA/TolQ/ExbB proton channel family M5598_RS18885 PF00593 TonB dependent receptor M5598_RS18885 PF07715 TonB-dependent Receptor Plug Domain M5598_RS18890 PF00672 HAMP domain M5598_RS18890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS18890 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS18890 PF16750 Sensor domain of 2-component histidine kinase M5598_RS18895 PF00072 Response regulator receiver domain M5598_RS18895 PF00486 Transcriptional regulatory protein, C terminal M5598_RS18900 PF00056 lactate/malate dehydrogenase, NAD binding domain M5598_RS18900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M5598_RS18905 PF03009 Glycerophosphoryl diester phosphodiesterase family M5598_RS18915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M5598_RS18915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M5598_RS18920 PF10928 Protein of unknown function (DUF2810) M5598_RS18925 PF12852 Cupin M5598_RS18925 PF12833 Helix-turn-helix domain M5598_RS18930 PF12706 Beta-lactamase superfamily domain M5598_RS18935 PF00589 Phage integrase family M5598_RS18935 PF02899 Phage integrase, N-terminal SAM-like domain M5598_RS18940 PF07693 KAP family P-loop domain M5598_RS19005 PF04013 Putative SAM-dependent RNA methyltransferase M5598_RS19010 PF01523 Putative modulator of DNA gyrase M5598_RS19015 PF01523 Putative modulator of DNA gyrase M5598_RS19020 PF08543 Phosphomethylpyrimidine kinase M5598_RS19025 PF00005 ABC transporter M5598_RS19030 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS19035 PF09084 NMT1/THI5 like M5598_RS19040 PF03070 TENA/THI-4/PQQC family M5598_RS19045 PF02110 Hydroxyethylthiazole kinase family M5598_RS19050 PF02581 Thiamine monophosphate synthase M5598_RS19060 PF00384 Molybdopterin oxidoreductase M5598_RS19060 PF18364 Molybdopterin oxidoreductase N-terminal domain M5598_RS19060 PF01568 Molydopterin dinucleotide binding domain M5598_RS19065 PF03264 NapC/NirT cytochrome c family, N-terminal region M5598_RS19090 PF00583 Acetyltransferase (GNAT) family M5598_RS19110 PF00155 Aminotransferase class I and II M5598_RS19110 PF00392 Bacterial regulatory proteins, gntR family M5598_RS19115 PF02595 Glycerate kinase family M5598_RS19120 PF02447 GntP family permease M5598_RS19125 PF17853 GGDEF-like domain M5598_RS19125 PF13556 PucR C-terminal helix-turn-helix domain M5598_RS19125 PF05651 Putative sugar diacid recognition M5598_RS19160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5598_RS19165 PF01661 Macro domain M5598_RS19170 PF01204 Trehalase M5598_RS19180 PF12706 Beta-lactamase superfamily domain M5598_RS19190 PF07690 Major Facilitator Superfamily M5598_RS19195 PF13533 Biotin-lipoyl like M5598_RS19200 PF03922 OmpW family M5598_RS19205 PF13599 Pentapeptide repeats (9 copies) M5598_RS19220 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading M5598_RS19220 PF18416 N-acetylglucosamine binding protein domain 2 M5598_RS19225 PF01037 Lrp/AsnC ligand binding domain M5598_RS19230 PF01810 LysE type translocator M5598_RS19235 PF00326 Prolyl oligopeptidase family M5598_RS19240 PF08021 Siderophore-interacting FAD-binding domain M5598_RS19240 PF04954 Siderophore-interacting protein M5598_RS19245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS19245 PF03466 LysR substrate binding domain M5598_RS19250 PF00797 N-acetyltransferase M5598_RS19255 PF08240 Alcohol dehydrogenase GroES-like domain M5598_RS19255 PF00107 Zinc-binding dehydrogenase M5598_RS19260 PF00756 Putative esterase M5598_RS19270 PF17152 Periplasmic sensor domain M5598_RS19270 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS19285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS19285 PF03466 LysR substrate binding domain M5598_RS19300 PF00849 RNA pseudouridylate synthase M5598_RS19305 PF01554 MatE M5598_RS19310 PF00563 EAL domain M5598_RS19310 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS19320 PF06865 Pyrimidine/purine nucleoside phosphorylase M5598_RS19330 PF00704 Glycosyl hydrolases family 18 M5598_RS19330 PF08329 Chitinase A, N-terminal domain M5598_RS19350 PF03600 Citrate transporter M5598_RS19360 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M5598_RS19370 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M5598_RS19370 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M5598_RS19375 PF00730 HhH-GPD superfamily base excision DNA repair protein M5598_RS19375 PF06029 AlkA N-terminal domain M5598_RS19385 PF07681 DoxX M5598_RS19390 PF02678 Pirin M5598_RS19390 PF17954 Quercetinase C-terminal cupin domain M5598_RS19395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS19395 PF03466 LysR substrate binding domain M5598_RS19410 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M5598_RS19420 PF03616 Sodium/glutamate symporter M5598_RS19425 PF00392 Bacterial regulatory proteins, gntR family M5598_RS19425 PF00155 Aminotransferase class I and II M5598_RS19430 PF00005 ABC transporter M5598_RS19440 PF03616 Sodium/glutamate symporter M5598_RS19445 PF00132 Bacterial transferase hexapeptide (six repeats) M5598_RS19460 PF17200 Single Cache domain 2 M5598_RS19460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS19460 PF00672 HAMP domain M5598_RS19465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M5598_RS19475 PF04397 LytTr DNA-binding domain M5598_RS19475 PF00072 Response regulator receiver domain M5598_RS19480 PF07694 5TMR of 5TMR-LYT M5598_RS19480 PF13492 GAF domain M5598_RS19480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS19480 PF06580 Histidine kinase M5598_RS19500 PF00005 ABC transporter M5598_RS19510 PF01098 Cell cycle protein M5598_RS19515 PF01709 Transcriptional regulator M5598_RS19525 PF17149 Periplasmic sensor domain found in signal transduction proteins M5598_RS19525 PF00672 HAMP domain M5598_RS19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS19525 PF01627 Hpt domain M5598_RS19525 PF00072 Response regulator receiver domain M5598_RS19525 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS19535 PF00925 GTP cyclohydrolase II M5598_RS19535 PF08719 Domain of unknown function (DUF1768) M5598_RS19545 PF00005 ABC transporter M5598_RS19545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS19550 PF00005 ABC transporter M5598_RS19550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS19560 PF01610 Transposase M5598_RS19560 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 M5598_RS19560 PF13542 Helix-turn-helix domain of transposase family ISL3 M5598_RS19570 PF13614 AAA domain M5598_RS19570 PF18607 ParA helix turn helix domain M5598_RS19575 PF02195 ParB-like nuclease domain M5598_RS19575 PF08775 ParB family M5598_RS19580 PF13718 GNAT acetyltransferase 2 M5598_RS19580 PF05127 Helicase M5598_RS19590 PF00132 Bacterial transferase hexapeptide (six repeats) M5598_RS19595 PF03466 LysR substrate binding domain M5598_RS19595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS19600 PF03575 Peptidase family S51 M5598_RS19605 PF00267 Gram-negative porin M5598_RS19610 PF00367 phosphotransferase system, EIIB M5598_RS19610 PF02378 Phosphotransferase system, EIIC M5598_RS19615 PF01380 SIS domain M5598_RS19620 PF01418 Helix-turn-helix domain, rpiR family M5598_RS19620 PF01380 SIS domain M5598_RS19625 PF00246 Zinc carboxypeptidase M5598_RS19630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS19635 PF03358 NADPH-dependent FMN reductase M5598_RS19645 PF03412 Peptidase C39 family M5598_RS19645 PF00664 ABC transporter transmembrane region M5598_RS19645 PF00005 ABC transporter M5598_RS19660 PF00529 HlyD membrane-fusion protein of T1SS M5598_RS19665 PF02954 Bacterial regulatory protein, Fis family M5598_RS19665 PF00072 Response regulator receiver domain M5598_RS19665 PF00158 Sigma-54 interaction domain M5598_RS19670 PF02743 Cache domain M5598_RS19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS19670 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS19675 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M5598_RS19675 PF01243 Pyridoxamine 5'-phosphate oxidase M5598_RS19685 PF12833 Helix-turn-helix domain M5598_RS19690 PF00171 Aldehyde dehydrogenase family M5598_RS19690 PF01619 Proline dehydrogenase M5598_RS19690 PF14850 DNA-binding domain of Proline dehydrogenase M5598_RS19690 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M5598_RS19700 PF00474 Sodium:solute symporter family M5598_RS19735 PF01037 Lrp/AsnC ligand binding domain M5598_RS19745 PF00005 ABC transporter M5598_RS19745 PF00664 ABC transporter transmembrane region M5598_RS19775 PF10688 Bacterial inner membrane protein M5598_RS19780 PF01081 KDPG and KHG aldolase M5598_RS19785 PF00294 pfkB family carbohydrate kinase M5598_RS19790 PF02614 Glucuronate isomerase M5598_RS19795 PF01232 Mannitol dehydrogenase Rossmann domain M5598_RS19795 PF08125 Mannitol dehydrogenase C-terminal domain M5598_RS19800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M5598_RS19805 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M5598_RS19810 PF03480 Bacterial extracellular solute-binding protein, family 7 M5598_RS19815 PF07729 FCD domain M5598_RS19815 PF00392 Bacterial regulatory proteins, gntR family M5598_RS19820 PF03786 D-mannonate dehydratase (UxuA) M5598_RS19825 PF00270 DEAD/DEAH box helicase M5598_RS19825 PF00271 Helicase conserved C-terminal domain M5598_RS19830 PF03475 3-alpha domain M5598_RS19830 PF03473 MOSC domain M5598_RS19845 PF02056 Family 4 glycosyl hydrolase M5598_RS19845 PF11975 Family 4 glycosyl hydrolase C-terminal domain M5598_RS19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS19850 PF03466 LysR substrate binding domain M5598_RS19855 PF02743 Cache domain M5598_RS19855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS19855 PF00672 HAMP domain M5598_RS19865 PF04542 Sigma-70 region 2 M5598_RS19865 PF08281 Sigma-70, region 4 M5598_RS19870 PF01965 DJ-1/PfpI family M5598_RS19870 PF12833 Helix-turn-helix domain M5598_RS19875 PF03466 LysR substrate binding domain M5598_RS19875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS19900 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS19900 PF13192 Thioredoxin domain M5598_RS19905 PF00578 AhpC/TSA family M5598_RS19905 PF10417 C-terminal domain of 1-Cys peroxiredoxin M5598_RS19910 PF01047 MarR family M5598_RS19915 PF02566 OsmC-like protein M5598_RS19930 PF12833 Helix-turn-helix domain M5598_RS19930 PF02311 AraC-like ligand binding domain M5598_RS19940 PF11762 L-arabinose isomerase C-terminal domain M5598_RS19940 PF02610 L-arabinose isomerase M5598_RS19945 PF00596 Class II Aldolase and Adducin N-terminal domain M5598_RS19950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M5598_RS19950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M5598_RS19955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M5598_RS19960 PF00005 ABC transporter M5598_RS19965 PF02653 Branched-chain amino acid transport system / permease component M5598_RS19970 PF01136 Peptidase family U32 M5598_RS19980 PF00367 phosphotransferase system, EIIB M5598_RS19980 PF02378 Phosphotransferase system, EIIC M5598_RS19985 PF00072 Response regulator receiver domain M5598_RS19985 PF00486 Transcriptional regulatory protein, C terminal M5598_RS19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS19990 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS19990 PF08521 Two-component sensor kinase N-terminal M5598_RS19995 PF01547 Bacterial extracellular solute-binding protein M5598_RS20000 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M5598_RS20000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M5598_RS20005 PF06276 Ferric iron reductase FhuF-like transporter M5598_RS20005 PF04183 IucA / IucC family M5598_RS20015 PF04183 IucA / IucC family M5598_RS20015 PF06276 Ferric iron reductase FhuF-like transporter M5598_RS20020 PF00206 Lyase M5598_RS20020 PF02655 ATP-grasp domain M5598_RS20025 PF00593 TonB dependent receptor M5598_RS20025 PF07715 TonB-dependent Receptor Plug Domain M5598_RS20030 PF07660 Secretin and TonB N terminus short domain M5598_RS20030 PF00593 TonB dependent receptor M5598_RS20030 PF07715 TonB-dependent Receptor Plug Domain M5598_RS20035 PF01497 Periplasmic binding protein M5598_RS20040 PF01032 FecCD transport family M5598_RS20045 PF01032 FecCD transport family M5598_RS20050 PF00005 ABC transporter M5598_RS20055 PF00672 HAMP domain M5598_RS20055 PF17200 Single Cache domain 2 M5598_RS20055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS20060 PF05193 Peptidase M16 inactive domain M5598_RS20060 PF00675 Insulinase (Peptidase family M16) M5598_RS20070 PF04225 Opacity-associated protein A LysM-like domain M5598_RS20070 PF01551 Peptidase family M23 M5598_RS20080 PF07690 Major Facilitator Superfamily M5598_RS20090 PF00128 Alpha amylase, catalytic domain M5598_RS20090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M5598_RS20095 PF02264 LamB porin M5598_RS20110 PF00128 Alpha amylase, catalytic domain M5598_RS20110 PF16657 Maltogenic Amylase, C-terminal domain M5598_RS20110 PF02903 Alpha amylase, N-terminal ig-like domain M5598_RS20115 PF04231 Endonuclease I M5598_RS20120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M5598_RS20120 PF11852 Domain of unknown function (DUF3372) M5598_RS20120 PF03714 Bacterial pullanase-associated domain M5598_RS20120 PF18494 Pullulanase Ins domain M5598_RS20120 PF17967 Pullulanase N2 domain M5598_RS20135 PF01276 Orn/Lys/Arg decarboxylase, major domain M5598_RS20135 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M5598_RS20135 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M5598_RS20140 PF13520 Amino acid permease M5598_RS20150 PF08543 Phosphomethylpyrimidine kinase M5598_RS20160 PF00375 Sodium:dicarboxylate symporter family M5598_RS20165 PF03193 RsgA GTPase M5598_RS20170 PF00367 phosphotransferase system, EIIB M5598_RS20170 PF02378 Phosphotransferase system, EIIC M5598_RS20180 PF02630 SCO1/SenC M5598_RS20195 PF00196 Bacterial regulatory proteins, luxR family M5598_RS20195 PF17874 MalT-like TPR region M5598_RS20205 PF00343 Carbohydrate phosphorylase M5598_RS20210 PF02446 4-alpha-glucanotransferase M5598_RS20215 PF00128 Alpha amylase, catalytic domain M5598_RS20215 PF02806 Alpha amylase, C-terminal all-beta domain M5598_RS20215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M5598_RS20220 PF00912 Transglycosylase M5598_RS20225 PF00128 Alpha amylase, catalytic domain M5598_RS20240 PF07670 Nucleoside recognition M5598_RS20245 PF07670 Nucleoside recognition M5598_RS20250 PF07687 Peptidase dimerisation domain M5598_RS20250 PF01546 Peptidase family M20/M25/M40 M5598_RS20255 PF06803 Protein of unknown function (DUF1232) M5598_RS20260 PF00375 Sodium:dicarboxylate symporter family M5598_RS20270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS20270 PF03466 LysR substrate binding domain M5598_RS20275 PF08803 Putative mono-oxygenase ydhR M5598_RS20290 PF00881 Nitroreductase family M5598_RS20295 PF01914 MarC family integral membrane protein M5598_RS20300 PF01734 Patatin-like phospholipase M5598_RS20305 PF18416 N-acetylglucosamine binding protein domain 2 M5598_RS20305 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading M5598_RS20310 PF00581 Rhodanese-like domain M5598_RS20310 PF17773 UPF0176 acylphosphatase like domain M5598_RS20320 PF00561 alpha/beta hydrolase fold M5598_RS20325 PF00768 D-alanyl-D-alanine carboxypeptidase M5598_RS20325 PF07943 Penicillin-binding protein 5, C-terminal domain M5598_RS20330 PF00686 Starch binding domain M5598_RS20330 PF00128 Alpha amylase, catalytic domain M5598_RS20335 PF12833 Helix-turn-helix domain M5598_RS20335 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M5598_RS20340 PF00881 Nitroreductase family M5598_RS20350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS20350 PF03466 LysR substrate binding domain M5598_RS20355 PF09905 DNA-binding protein VF530 M5598_RS20365 PF00175 Oxidoreductase NAD-binding domain M5598_RS20365 PF00970 Oxidoreductase FAD-binding domain M5598_RS20375 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M5598_RS20380 PF01594 AI-2E family transporter M5598_RS20390 PF13533 Biotin-lipoyl like M5598_RS20410 PF00892 EamA-like transporter family M5598_RS20415 PF03466 LysR substrate binding domain M5598_RS20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS20420 PF07690 Major Facilitator Superfamily M5598_RS20430 PF00583 Acetyltransferase (GNAT) family M5598_RS20440 PF00923 Transaldolase/Fructose-6-phosphate aldolase M5598_RS20445 PF04055 Radical SAM superfamily M5598_RS20450 PF02901 Pyruvate formate lyase-like M5598_RS20450 PF01228 Glycine radical M5598_RS20470 PF08000 Bacterial PH domain M5598_RS20480 PF13677 Membrane MotB of proton-channel complex MotA/MotB M5598_RS20480 PF00691 OmpA family M5598_RS20485 PF01618 MotA/TolQ/ExbB proton channel family M5598_RS20490 PF04542 Sigma-70 region 2 M5598_RS20490 PF04545 Sigma-70, region 4 M5598_RS20495 PF03748 Flagellar basal body-associated protein FliL M5598_RS20510 PF02561 Flagellar protein FliS M5598_RS20515 PF02465 Flagellar hook-associated protein 2 N-terminus M5598_RS20515 PF07195 Flagellar hook-associated protein 2 C-terminus M5598_RS20515 PF07196 Flagellin hook IN motif M5598_RS20530 PF00700 Bacterial flagellin C-terminal helical region M5598_RS20530 PF00669 Bacterial flagellin N-terminal helical region M5598_RS20540 PF00771 FHIPEP family M5598_RS20545 PF01312 FlhB HrpN YscU SpaS Family M5598_RS20550 PF01311 Bacterial export proteins, family 1 M5598_RS20555 PF01313 Bacterial export proteins, family 3 M5598_RS20560 PF00813 FliP family M5598_RS20565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M5598_RS20580 PF02954 Bacterial regulatory protein, Fis family M5598_RS20580 PF00072 Response regulator receiver domain M5598_RS20580 PF00158 Sigma-54 interaction domain M5598_RS20585 PF02049 Flagellar hook-basal body complex protein FliE M5598_RS20590 PF01514 Secretory protein of YscJ/FliF family M5598_RS20590 PF08345 Flagellar M-ring protein C-terminal M5598_RS20595 PF14841 FliG middle domain M5598_RS20595 PF14842 FliG N-terminal domain M5598_RS20595 PF01706 FliG C-terminal domain M5598_RS20605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5598_RS20605 PF18269 T3SS EscN ATPase C-terminal domain M5598_RS20620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS20620 PF03466 LysR substrate binding domain M5598_RS20655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5598_RS20660 PF03466 LysR substrate binding domain M5598_RS20660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS20680 PF00486 Transcriptional regulatory protein, C terminal M5598_RS20680 PF00072 Response regulator receiver domain M5598_RS20685 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS20685 PF08448 PAS fold M5598_RS20685 PF13426 PAS domain M5598_RS20685 PF00072 Response regulator receiver domain M5598_RS20685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS20690 PF00080 Copper/zinc superoxide dismutase (SODC) M5598_RS20695 PF00266 Aminotransferase class-V M5598_RS20700 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS20705 PF03707 Bacterial signalling protein N terminal repeat M5598_RS20705 PF00563 EAL domain M5598_RS20705 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS20710 PF00155 Aminotransferase class I and II M5598_RS20715 PF08240 Alcohol dehydrogenase GroES-like domain M5598_RS20715 PF00107 Zinc-binding dehydrogenase M5598_RS20745 PF00194 Eukaryotic-type carbonic anhydrase M5598_RS20750 PF00924 Mechanosensitive ion channel M5598_RS20760 PF01070 FMN-dependent dehydrogenase M5598_RS20765 PF02652 L-lactate permease M5598_RS20770 PF03466 LysR substrate binding domain M5598_RS20770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS20775 PF00326 Prolyl oligopeptidase family M5598_RS20775 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M5598_RS20780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5598_RS20780 PF00005 ABC transporter M5598_RS20790 PF13654 AAA domain M5598_RS20790 PF05362 Lon protease (S16) C-terminal proteolytic domain M5598_RS20795 PF00672 HAMP domain M5598_RS20795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS20800 PF07238 PilZ domain M5598_RS20800 PF12945 Flagellar protein YcgR M5598_RS20815 PF00583 Acetyltransferase (GNAT) family M5598_RS20820 PF12800 4Fe-4S binding domain M5598_RS20820 PF12838 4Fe-4S dicluster domain M5598_RS20825 PF12801 4Fe-4S binding domain M5598_RS20825 PF13237 4Fe-4S dicluster domain M5598_RS20840 PF00005 ABC transporter M5598_RS20840 PF12558 ATP-binding cassette cobalt transporter M5598_RS20845 PF07155 ECF-type riboflavin transporter, S component M5598_RS20850 PF00529 HlyD membrane-fusion protein of T1SS M5598_RS20850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS20855 PF11742 Protein of unknown function (DUF3302) M5598_RS20860 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS20875 PF01048 Phosphorylase superfamily M5598_RS20880 PF08349 Protein of unknown function (DUF1722) M5598_RS20885 PF13411 MerR HTH family regulatory protein M5598_RS20890 PF00875 DNA photolyase M5598_RS20890 PF03441 FAD binding domain of DNA photolyase M5598_RS20895 PF03734 L,D-transpeptidase catalytic domain M5598_RS20895 PF01476 LysM domain M5598_RS20895 PF17969 L,D-transpeptidase C-terminal domain M5598_RS20905 PF00270 DEAD/DEAH box helicase M5598_RS20905 PF00271 Helicase conserved C-terminal domain M5598_RS20910 PF00326 Prolyl oligopeptidase family M5598_RS20910 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M5598_RS20915 PF00593 TonB dependent receptor M5598_RS20915 PF07715 TonB-dependent Receptor Plug Domain M5598_RS20935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS20935 PF00672 HAMP domain M5598_RS20940 PF12849 PBP superfamily domain M5598_RS20945 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS20950 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS20955 PF00005 ABC transporter M5598_RS20970 PF13519 von Willebrand factor type A domain M5598_RS20970 PF07584 Aerotolerance regulator N-terminal M5598_RS20975 PF13519 von Willebrand factor type A domain M5598_RS20985 PF01882 Protein of unknown function DUF58 M5598_RS20990 PF07726 ATPase family associated with various cellular activities (AAA) M5598_RS20990 PF17863 AAA lid domain M5598_RS20995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS20995 PF00672 HAMP domain M5598_RS20995 PF02743 Cache domain M5598_RS21005 PF00196 Bacterial regulatory proteins, luxR family M5598_RS21010 PF00196 Bacterial regulatory proteins, luxR family M5598_RS21020 PF00664 ABC transporter transmembrane region M5598_RS21020 PF00005 ABC transporter M5598_RS21025 PF00529 HlyD membrane-fusion protein of T1SS M5598_RS21035 PF01032 FecCD transport family M5598_RS21040 PF01497 Periplasmic binding protein M5598_RS21045 PF00005 ABC transporter M5598_RS21050 PF00593 TonB dependent receptor M5598_RS21050 PF07715 TonB-dependent Receptor Plug Domain M5598_RS21055 PF00664 ABC transporter transmembrane region M5598_RS21055 PF00005 ABC transporter M5598_RS21060 PF02702 Osmosensitive K+ channel His kinase sensor domain M5598_RS21060 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS21060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS21060 PF02702 Osmosensitive K+ channel His kinase sensor domain M5598_RS21060 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS21060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS21060 PF13493 Domain of unknown function (DUF4118) M5598_RS21060 PF13493 Domain of unknown function (DUF4118) M5598_RS21065 PF00072 Response regulator receiver domain M5598_RS21065 PF00486 Transcriptional regulatory protein, C terminal M5598_RS21070 PF02080 TrkA-C domain M5598_RS21070 PF02254 TrkA-N domain M5598_RS21075 PF02386 Cation transport protein M5598_RS21080 PF03707 Bacterial signalling protein N terminal repeat M5598_RS21080 PF00563 EAL domain M5598_RS21080 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS21085 PF00127 Copper binding proteins, plastocyanin/azurin family M5598_RS21090 PF13419 Haloacid dehalogenase-like hydrolase M5598_RS21100 PF01238 Phosphomannose isomerase type I M5598_RS21105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5598_RS21105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5598_RS21110 PF12833 Helix-turn-helix domain M5598_RS21120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5598_RS21130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M5598_RS21130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M5598_RS21135 PF00199 Catalase M5598_RS21135 PF06628 Catalase-related immune-responsive M5598_RS21140 PF13417 Glutathione S-transferase, N-terminal domain M5598_RS21145 PF00107 Zinc-binding dehydrogenase M5598_RS21145 PF16884 N-terminal domain of oxidoreductase M5598_RS21150 PF00440 Bacterial regulatory proteins, tetR family M5598_RS21150 PF16925 Tetracyclin repressor-like, C-terminal domain M5598_RS21155 PF04266 ASCH domain M5598_RS21185 PF13439 Glycosyltransferase Family 4 M5598_RS21185 PF00534 Glycosyl transferases group 1 M5598_RS21195 PF13614 AAA domain M5598_RS21195 PF13807 G-rich domain on putative tyrosine kinase M5598_RS21195 PF02706 Chain length determinant protein M5598_RS21210 PF02397 Bacterial sugar transferase M5598_RS21215 PF00005 ABC transporter M5598_RS21215 PF08402 TOBE domain M5598_RS21220 PF01547 Bacterial extracellular solute-binding protein M5598_RS21225 PF14785 Maltose transport system permease protein MalF P2 domain M5598_RS21225 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS21230 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS21260 PF05661 Protein of unknown function (DUF808) M5598_RS21265 PF01979 Amidohydrolase family M5598_RS21270 PF01679 Proteolipid membrane potential modulator M5598_RS21275 PF03476 MOSC N-terminal beta barrel domain M5598_RS21275 PF03473 MOSC domain M5598_RS21275 PF00111 2Fe-2S iron-sulfur cluster binding domain M5598_RS21275 PF03476 MOSC N-terminal beta barrel domain M5598_RS21275 PF03473 MOSC domain M5598_RS21275 PF00111 2Fe-2S iron-sulfur cluster binding domain M5598_RS21280 PF02540 NAD synthase M5598_RS21285 PF01467 Cytidylyltransferase-like M5598_RS21325 PF00005 ABC transporter M5598_RS21330 PF01032 FecCD transport family M5598_RS21340 PF02472 Biopolymer transport protein ExbD/TolR M5598_RS21345 PF01618 MotA/TolQ/ExbB proton channel family M5598_RS21350 PF03544 Gram-negative bacterial TonB protein C-terminal M5598_RS21355 PF04055 Radical SAM superfamily M5598_RS21360 PF06228 Haem utilisation ChuX/HutX M5598_RS21365 PF01243 Pyridoxamine 5'-phosphate oxidase M5598_RS21375 PF00072 Response regulator receiver domain M5598_RS21375 PF01584 CheW-like domain M5598_RS21390 PF00561 alpha/beta hydrolase fold M5598_RS21400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS21400 PF03466 LysR substrate binding domain M5598_RS21405 PF00082 Subtilase family M5598_RS21425 PF00141 Peroxidase M5598_RS21430 PF00210 Ferritin-like domain M5598_RS21435 PF03466 LysR substrate binding domain M5598_RS21435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS21450 PF01752 Collagenase M5598_RS21450 PF08453 Peptidase family M9 N-terminal M5598_RS21450 PF04151 Bacterial pre-peptidase C-terminal domain M5598_RS21460 PF00128 Alpha amylase, catalytic domain M5598_RS21475 PF00999 Sodium/hydrogen exchanger family M5598_RS21475 PF02254 TrkA-N domain M5598_RS21480 PF02525 Flavodoxin-like fold M5598_RS21485 PF00582 Universal stress protein family M5598_RS21490 PF12848 ABC transporter M5598_RS21490 PF00005 ABC transporter M5598_RS21490 PF16326 ABC transporter C-terminal domain M5598_RS21495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M5598_RS21495 PF00326 Prolyl oligopeptidase family M5598_RS21505 PF13533 Biotin-lipoyl like M5598_RS21510 PF00873 AcrB/AcrD/AcrF family M5598_RS21515 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M5598_RS21525 PF13302 Acetyltransferase (GNAT) domain M5598_RS21535 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS21555 PF00873 AcrB/AcrD/AcrF family M5598_RS21575 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M5598_RS21575 PF00384 Molybdopterin oxidoreductase M5598_RS21575 PF01568 Molydopterin dinucleotide binding domain M5598_RS21575 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M5598_RS21575 PF12838 4Fe-4S dicluster domain M5598_RS21595 PF00005 ABC transporter M5598_RS21605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS21605 PF00672 HAMP domain M5598_RS21610 PF10282 Lactonase, 7-bladed beta-propeller M5598_RS21615 PF02567 Phenazine biosynthesis-like protein M5598_RS21620 PF01161 Phosphatidylethanolamine-binding protein M5598_RS21630 PF01758 Sodium Bile acid symporter family M5598_RS21645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5598_RS21650 PF02378 Phosphotransferase system, EIIC M5598_RS21650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5598_RS21655 PF00107 Zinc-binding dehydrogenase M5598_RS21655 PF08240 Alcohol dehydrogenase GroES-like domain M5598_RS21690 PF03222 Tryptophan/tyrosine permease family M5598_RS21700 PF00672 HAMP domain M5598_RS21700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS21700 PF02743 Cache domain M5598_RS21705 PF07670 Nucleoside recognition M5598_RS21725 PF01551 Peptidase family M23 M5598_RS21725 PF08525 Opacity-associated protein A N-terminal motif M5598_RS21725 PF01476 LysM domain M5598_RS21730 PF00563 EAL domain M5598_RS21730 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS21730 PF08447 PAS fold M5598_RS21730 PF08448 PAS fold M5598_RS21735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS21735 PF03466 LysR substrate binding domain M5598_RS21740 PF07690 Major Facilitator Superfamily M5598_RS21755 PF00462 Glutaredoxin M5598_RS21760 PF00892 EamA-like transporter family M5598_RS21765 PF00267 Gram-negative porin M5598_RS21775 PF01557 Fumarylacetoacetate (FAA) hydrolase family M5598_RS21790 PF12833 Helix-turn-helix domain M5598_RS21795 PF01810 LysE type translocator M5598_RS21805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M5598_RS21805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M5598_RS21805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M5598_RS21805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M5598_RS21810 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M5598_RS21810 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M5598_RS21815 PF00115 Cytochrome C and Quinol oxidase polypeptide I M5598_RS21820 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 M5598_RS21825 PF00510 Cytochrome c oxidase subunit III M5598_RS21845 PF02628 Cytochrome oxidase assembly protein M5598_RS21850 PF01040 UbiA prenyltransferase family M5598_RS21855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M5598_RS21855 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M5598_RS21885 PF00313 'Cold-shock' DNA-binding domain M5598_RS21890 PF03889 Alternative ribosome-rescue factor A M5598_RS21895 PF13542 Helix-turn-helix domain of transposase family ISL3 M5598_RS21895 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 M5598_RS21895 PF01610 Transposase M5598_RS21900 PF00672 HAMP domain M5598_RS21900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS21910 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS21925 PF00005 ABC transporter M5598_RS21925 PF02687 FtsX-like permease family M5598_RS21925 PF12704 MacB-like periplasmic core domain M5598_RS21930 PF12704 MacB-like periplasmic core domain M5598_RS21930 PF00005 ABC transporter M5598_RS21930 PF02687 FtsX-like permease family M5598_RS21940 PF00672 HAMP domain M5598_RS21940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS21940 PF17200 Single Cache domain 2 M5598_RS21945 PF00210 Ferritin-like domain M5598_RS21955 PF07995 Glucose / Sorbosone dehydrogenase M5598_RS21960 PF00465 Iron-containing alcohol dehydrogenase M5598_RS21975 PF00892 EamA-like transporter family M5598_RS21990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS21990 PF03466 LysR substrate binding domain M5598_RS22000 PF13193 AMP-binding enzyme C-terminal domain M5598_RS22000 PF00501 AMP-binding enzyme M5598_RS22005 PF00351 Biopterin-dependent aromatic amino acid hydroxylase M5598_RS22010 PF01329 Pterin 4 alpha carbinolamine dehydratase M5598_RS22030 PF12843 Putative quorum-sensing-regulated virulence factor M5598_RS22035 PF00271 Helicase conserved C-terminal domain M5598_RS22035 PF00270 DEAD/DEAH box helicase M5598_RS22040 PF09905 DNA-binding protein VF530 M5598_RS22045 PF00291 Pyridoxal-phosphate dependent enzyme M5598_RS22055 PF01470 Pyroglutamyl peptidase M5598_RS22065 PF07683 Cobalamin synthesis protein cobW C-terminal domain M5598_RS22065 PF02492 CobW/HypB/UreG, nucleotide-binding domain M5598_RS22070 PF00270 DEAD/DEAH box helicase M5598_RS22070 PF00271 Helicase conserved C-terminal domain M5598_RS22090 PF12792 CSS motif domain associated with EAL M5598_RS22090 PF00563 EAL domain M5598_RS22095 PF00005 ABC transporter M5598_RS22100 PF00672 HAMP domain M5598_RS22100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS22100 PF12729 Four helix bundle sensory module for signal transduction M5598_RS22110 PF03466 LysR substrate binding domain M5598_RS22110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS22115 PF00884 Sulfatase M5598_RS22120 PF04055 Radical SAM superfamily M5598_RS22120 PF13186 Iron-sulfur cluster-binding domain M5598_RS22125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS22125 PF03466 LysR substrate binding domain M5598_RS22135 PF01575 MaoC like domain M5598_RS22140 PF12849 PBP superfamily domain M5598_RS22150 PF12833 Helix-turn-helix domain M5598_RS22155 PF08206 Ribonuclease B OB domain M5598_RS22155 PF00575 S1 RNA binding domain M5598_RS22155 PF00773 RNB domain M5598_RS22160 PF03880 DbpA RNA binding domain M5598_RS22160 PF00270 DEAD/DEAH box helicase M5598_RS22160 PF00271 Helicase conserved C-terminal domain M5598_RS22165 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS22165 PF00563 EAL domain M5598_RS22165 PF13426 PAS domain M5598_RS22170 PF00871 Acetokinase family M5598_RS22175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS22175 PF08447 PAS fold M5598_RS22175 PF13426 PAS domain M5598_RS22185 PF10063 Uncharacterized integral membrane protein (DUF2301) M5598_RS22190 PF00682 HMGL-like M5598_RS22195 PF00378 Enoyl-CoA hydratase/isomerase M5598_RS22200 PF01039 Carboxyl transferase domain M5598_RS22205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5598_RS22205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5598_RS22205 PF02770 Acyl-CoA dehydrogenase, middle domain M5598_RS22210 PF09278 MerR, DNA binding M5598_RS22210 PF00376 MerR family regulatory protein M5598_RS22215 PF00108 Thiolase, N-terminal domain M5598_RS22215 PF02803 Thiolase, C-terminal domain M5598_RS22220 PF00171 Aldehyde dehydrogenase family M5598_RS22225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5598_RS22225 PF02770 Acyl-CoA dehydrogenase, middle domain M5598_RS22225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5598_RS22230 PF00378 Enoyl-CoA hydratase/isomerase M5598_RS22235 PF00378 Enoyl-CoA hydratase/isomerase M5598_RS22240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M5598_RS22240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M5598_RS22250 PF06481 COX Aromatic Rich Motif M5598_RS22250 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M5598_RS22255 PF00115 Cytochrome C and Quinol oxidase polypeptide I M5598_RS22260 PF00510 Cytochrome c oxidase subunit III M5598_RS22270 PF01040 UbiA prenyltransferase family M5598_RS22280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M5598_RS22285 PF08031 Berberine and berberine like M5598_RS22285 PF01565 FAD binding domain M5598_RS22290 PF00005 ABC transporter M5598_RS22295 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5598_RS22300 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS22305 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS22315 PF03466 LysR substrate binding domain M5598_RS22315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS22320 PF00043 Glutathione S-transferase, C-terminal domain M5598_RS22320 PF02798 Glutathione S-transferase, N-terminal domain M5598_RS22330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M5598_RS22330 PF02817 e3 binding domain M5598_RS22330 PF00364 Biotin-requiring enzyme M5598_RS22335 PF02779 Transketolase, pyrimidine binding domain M5598_RS22335 PF02780 Transketolase, C-terminal domain M5598_RS22340 PF00676 Dehydrogenase E1 component M5598_RS22355 PF00012 Hsp70 protein M5598_RS22360 PF04314 Copper chaperone PCu(A)C M5598_RS22385 PF00072 Response regulator receiver domain M5598_RS22385 PF00486 Transcriptional regulatory protein, C terminal M5598_RS22400 PF00245 Alkaline phosphatase M5598_RS22410 PF01483 Proprotein convertase P-domain M5598_RS22410 PF00082 Subtilase family M5598_RS22420 PF00072 Response regulator receiver domain M5598_RS22420 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS22425 PF03222 Tryptophan/tyrosine permease family M5598_RS22430 PF00583 Acetyltransferase (GNAT) family M5598_RS22435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M5598_RS22435 PF00384 Molybdopterin oxidoreductase M5598_RS22435 PF01568 Molydopterin dinucleotide binding domain M5598_RS22440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M5598_RS22440 PF10414 Sirohaem synthase dimerisation region M5598_RS22440 PF14824 Sirohaem biosynthesis protein central M5598_RS22445 PF02885 Glycosyl transferase family, helical bundle domain M5598_RS22445 PF00591 Glycosyl transferase family, a/b domain M5598_RS22450 PF01738 Dienelactone hydrolase family M5598_RS22455 PF03861 ANTAR domain M5598_RS22455 PF08376 Nitrate and nitrite sensing M5598_RS22465 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS22470 PF00005 ABC transporter M5598_RS22475 PF04324 BFD-like [2Fe-2S] binding domain M5598_RS22475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M5598_RS22475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M5598_RS22475 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS22475 PF13806 Rieske-like [2Fe-2S] domain M5598_RS22475 PF18267 Rubredoxin NAD+ reductase C-terminal domain M5598_RS22490 PF00440 Bacterial regulatory proteins, tetR family M5598_RS22490 PF08361 MAATS-type transcriptional repressor, C-terminal region M5598_RS22505 PF00211 Adenylate and Guanylate cyclase catalytic domain M5598_RS22505 PF00072 Response regulator receiver domain M5598_RS22530 PF03793 PASTA domain M5598_RS22530 PF00069 Protein kinase domain M5598_RS22545 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE M5598_RS22550 PF13677 Membrane MotB of proton-channel complex MotA/MotB M5598_RS22550 PF00691 OmpA family M5598_RS22555 PF14331 ImcF-related N-terminal domain M5598_RS22555 PF06744 Type VI secretion protein IcmF C-terminal M5598_RS22555 PF06761 Intracellular multiplication and human macrophage-killing M5598_RS22575 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 M5598_RS22580 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M5598_RS22585 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath M5598_RS22600 PF05947 Type VI secretion system, TssF M5598_RS22610 PF10431 C-terminal, D2-small domain, of ClpB protein M5598_RS22610 PF17871 AAA lid domain M5598_RS22610 PF07724 AAA domain (Cdc48 subfamily) M5598_RS22610 PF00004 ATPase family associated with various cellular activities (AAA) M5598_RS22620 PF04717 Type VI secretion system, phage-baseplate injector M5598_RS22620 PF06715 Gp5 C-terminal repeat (3 copies) M5598_RS22635 PF12320 Type 5 capsule protein repressor C-terminal domain M5598_RS22635 PF00149 Calcineurin-like phosphoesterase M5598_RS22640 PF13476 AAA domain M5598_RS22660 PF08212 Lipocalin-like domain M5598_RS22670 PF07690 Major Facilitator Superfamily M5598_RS22680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS22680 PF00072 Response regulator receiver domain M5598_RS22685 PF00155 Aminotransferase class I and II M5598_RS22690 PF01926 50S ribosome-binding GTPase M5598_RS22735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS22735 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS22735 PF09456 RcsC Alpha-Beta-Loop (ABL) M5598_RS22735 PF00072 Response regulator receiver domain M5598_RS22740 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS22740 PF03707 Bacterial signalling protein N terminal repeat M5598_RS22740 PF13188 PAS domain M5598_RS22740 PF00563 EAL domain M5598_RS22745 PF00196 Bacterial regulatory proteins, luxR family M5598_RS22745 PF00072 Response regulator receiver domain M5598_RS22750 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS22760 PF00072 Response regulator receiver domain M5598_RS22760 PF00196 Bacterial regulatory proteins, luxR family M5598_RS22780 PF01584 CheW-like domain M5598_RS22780 PF00072 Response regulator receiver domain M5598_RS22795 PF00892 EamA-like transporter family M5598_RS22805 PF01569 PAP2 superfamily M5598_RS22815 PF03606 C4-dicarboxylate anaerobic carrier M5598_RS22820 PF00034 Cytochrome c M5598_RS22825 PF01212 Beta-eliminating lyase M5598_RS22835 PF07728 AAA domain (dynein-related subfamily) M5598_RS22835 PF17868 AAA lid domain M5598_RS22835 PF12592 Protein of unknown function (DUF3763) M5598_RS22840 PF05762 VWA domain containing CoxE-like protein M5598_RS22855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS22855 PF03466 LysR substrate binding domain M5598_RS22860 PF01565 FAD binding domain M5598_RS22860 PF09330 D-lactate dehydrogenase, membrane binding M5598_RS22875 PF00842 Alanine racemase, C-terminal domain M5598_RS22875 PF01168 Alanine racemase, N-terminal domain M5598_RS22880 PF00672 HAMP domain M5598_RS22880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS22895 PF00128 Alpha amylase, catalytic domain M5598_RS22895 PF09154 Domain of unknown function (DUF1939) M5598_RS22915 PF06965 Na+/H+ antiporter 1 M5598_RS22915 PF13462 Thioredoxin M5598_RS22950 PF01272 Transcription elongation factor, GreA/GreB, C-term M5598_RS22950 PF14760 Rnk N-terminus M5598_RS22955 PF18267 Rubredoxin NAD+ reductase C-terminal domain M5598_RS22955 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS22955 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M5598_RS22955 PF04324 BFD-like [2Fe-2S] binding domain M5598_RS22955 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M5598_RS22960 PF13806 Rieske-like [2Fe-2S] domain M5598_RS22965 PF01226 Formate/nitrite transporter M5598_RS22970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M5598_RS22970 PF14824 Sirohaem biosynthesis protein central M5598_RS22970 PF10414 Sirohaem synthase dimerisation region M5598_RS22985 PF03605 Anaerobic c4-dicarboxylate membrane transporter M5598_RS22995 PF00593 TonB dependent receptor M5598_RS22995 PF07715 TonB-dependent Receptor Plug Domain M5598_RS23010 PF11756 Nitrous oxide-stimulated promoter M5598_RS23015 PF01554 MatE M5598_RS23020 PF07495 Y_Y_Y domain M5598_RS23020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS23020 PF00072 Response regulator receiver domain M5598_RS23020 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS23020 PF12833 Helix-turn-helix domain M5598_RS23020 PF07494 Two component regulator propeller M5598_RS23025 PF07690 Major Facilitator Superfamily M5598_RS23030 PF00085 Thioredoxin M5598_RS23035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M5598_RS23035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M5598_RS23055 PF01238 Phosphomannose isomerase type I M5598_RS23060 PF07690 Major Facilitator Superfamily M5598_RS23065 PF05231 MASE1 M5598_RS23065 PF07730 Histidine kinase M5598_RS23065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS23070 PF00196 Bacterial regulatory proteins, luxR family M5598_RS23070 PF00072 Response regulator receiver domain M5598_RS23075 PF07690 Major Facilitator Superfamily M5598_RS23080 PF02634 FdhD/NarQ family M5598_RS23085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS23085 PF03466 LysR substrate binding domain M5598_RS23090 PF00384 Molybdopterin oxidoreductase M5598_RS23095 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5598_RS23095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5598_RS23110 PF04143 Sulphur transport M5598_RS23120 PF00873 AcrB/AcrD/AcrF family M5598_RS23125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5598_RS23135 PF03477 ATP cone domain M5598_RS23135 PF13597 Anaerobic ribonucleoside-triphosphate reductase M5598_RS23145 PF01554 MatE M5598_RS23150 PF12833 Helix-turn-helix domain M5598_RS23155 PF00155 Aminotransferase class I and II M5598_RS23160 PF08443 RimK-like ATP-grasp domain M5598_RS23160 PF18030 RimK PreATP-grasp domain M5598_RS23170 PF04076 Bacterial OB fold (BOF) protein M5598_RS23175 PF07685 CobB/CobQ-like glutamine amidotransferase domain M5598_RS23185 PF00528 Binding-protein-dependent transport system inner membrane component M5598_RS23190 PF00005 ABC transporter M5598_RS23190 PF03459 TOBE domain M5598_RS23200 PF01590 GAF domain M5598_RS23200 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS23200 PF00360 Phytochrome region M5598_RS23200 PF00563 EAL domain M5598_RS23210 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS23225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M5598_RS23225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M5598_RS23225 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M5598_RS23230 PF02233 NAD(P) transhydrogenase beta subunit M5598_RS23240 PF00072 Response regulator receiver domain M5598_RS23240 PF00486 Transcriptional regulatory protein, C terminal M5598_RS23255 PF03701 Uncharacterised protein family (UPF0181) M5598_RS23260 PF00582 Universal stress protein family M5598_RS23275 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 M5598_RS23275 PF13542 Helix-turn-helix domain of transposase family ISL3 M5598_RS23275 PF01610 Transposase M5598_RS23305 PF05707 Zonular occludens toxin (Zot) M5598_RS23350 PF01253 Translation initiation factor SUI1 M5598_RS23360 PF07478 D-ala D-ala ligase C-terminus M5598_RS23360 PF01820 D-ala D-ala ligase N-terminus M5598_RS23370 PF13380 CoA binding domain M5598_RS23370 PF00583 Acetyltransferase (GNAT) family M5598_RS23370 PF13607 Succinyl-CoA ligase like flavodoxin domain M5598_RS23375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS23375 PF03466 LysR substrate binding domain M5598_RS23380 PF07715 TonB-dependent Receptor Plug Domain M5598_RS23380 PF04886 PT repeat M5598_RS23380 PF00593 TonB dependent receptor M5598_RS23390 PF16363 GDP-mannose 4,6 dehydratase M5598_RS23395 PF08447 PAS fold M5598_RS23395 PF00563 EAL domain M5598_RS23395 PF08448 PAS fold M5598_RS23395 PF05231 MASE1 M5598_RS23395 PF13426 PAS domain M5598_RS23395 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS23400 PF03746 LamB/YcsF family M5598_RS23405 PF02682 Carboxyltransferase domain, subdomain C and D M5598_RS23410 PF02626 Carboxyltransferase domain, subdomain A and B M5598_RS23425 PF00005 ABC transporter M5598_RS23430 PF13472 GDSL-like Lipase/Acylhydrolase family M5598_RS23435 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M5598_RS23435 PF12241 Trans-2-enoyl-CoA reductase catalytic region M5598_RS23435 PF07055 Enoyl reductase FAD binding domain M5598_RS23440 PF13188 PAS domain M5598_RS23440 PF03707 Bacterial signalling protein N terminal repeat M5598_RS23440 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS23440 PF00563 EAL domain M5598_RS23450 PF00684 DnaJ central domain M5598_RS23450 PF00226 DnaJ domain M5598_RS23450 PF01556 DnaJ C terminal domain M5598_RS23475 PF12793 Sugar transport-related sRNA regulator N-term M5598_RS23475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5598_RS23485 PF03061 Thioesterase superfamily M5598_RS23500 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M5598_RS23505 PF12262 Bacterial virulence factor lipase N-terminal M5598_RS23520 PF03741 Integral membrane protein TerC family M5598_RS23525 PF02872 5'-nucleotidase, C-terminal domain M5598_RS23525 PF00149 Calcineurin-like phosphoesterase M5598_RS23530 PF11398 Protein of unknown function (DUF2813) M5598_RS23535 PF06496 Protein of unknown function (DUF1097) M5598_RS23540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5598_RS23540 PF03466 LysR substrate binding domain M5598_RS23545 PF01226 Formate/nitrite transporter M5598_RS23550 PF04264 YceI-like domain M5598_RS23555 PF01292 Prokaryotic cytochrome b561 M5598_RS23570 PF12792 CSS motif domain associated with EAL M5598_RS23570 PF00563 EAL domain M5598_RS23575 PF00271 Helicase conserved C-terminal domain M5598_RS23575 PF00270 DEAD/DEAH box helicase M5598_RS23580 PF04336 Acyl carrier protein phosphodiesterase M5598_RS23585 PF00672 HAMP domain M5598_RS23585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS23590 PF13419 Haloacid dehalogenase-like hydrolase M5598_RS23595 PF11849 Domain of unknown function (DUF3369) M5598_RS23610 PF00294 pfkB family carbohydrate kinase M5598_RS23615 PF01268 Formate--tetrahydrofolate ligase M5598_RS23620 PF00483 Nucleotidyl transferase M5598_RS23625 PF00704 Glycosyl hydrolases family 18 M5598_RS23625 PF06483 Chitinase C M5598_RS23630 PF06719 AraC-type transcriptional regulator N-terminus M5598_RS23630 PF12833 Helix-turn-helix domain M5598_RS23635 PF00465 Iron-containing alcohol dehydrogenase M5598_RS23645 PF02954 Bacterial regulatory protein, Fis family M5598_RS23645 PF00072 Response regulator receiver domain M5598_RS23645 PF14532 Sigma-54 interaction domain M5598_RS23650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5598_RS23650 PF00512 His Kinase A (phospho-acceptor) domain M5598_RS23650 PF00672 HAMP domain M5598_RS23660 PF07690 Major Facilitator Superfamily M5598_RS23810 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M5598_RS23810 PF01926 50S ribosome-binding GTPase M5598_RS23825 PF12323 Helix-turn-helix domain M5598_RS23865 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family M5598_RS23885 PF01594 AI-2E family transporter M5598_RS23995 PF02600 Disulfide bond formation protein DsbB M5598_RS24000 PF00436 Single-strand binding protein family M5598_RS24095 PF00149 Calcineurin-like phosphoesterase M5598_RS24100 PF06965 Na+/H+ antiporter 1 M5598_RS24175 PF09179 TilS substrate binding domain M5598_RS24175 PF01171 PP-loop family M5598_RS24175 PF11734 TilS substrate C-terminal domain M5598_RS24180 PF00145 C-5 cytosine-specific DNA methylase M5598_RS24180 PF13411 MerR HTH family regulatory protein M5598_RS24200 PF01693 Caulimovirus viroplasmin M5598_RS24255 PF00994 Probable molybdopterin binding domain M5598_RS24255 PF02464 Competence-damaged protein M5598_RS24285 PF02631 RecX family M5598_RS24295 PF01027 Inhibitor of apoptosis-promoting Bax1 M5598_RS24320 PF00464 Serine hydroxymethyltransferase M5598_RS24325 PF11202 Phosphoribosyl transferase (PRTase) M5598_RS24325 PF15608 PELOTA RNA binding domain M5598_RS24450 PF01219 Prokaryotic diacylglycerol kinase M5598_RS24455 PF08019 Phosphoethanolamine transferase EptA/EptB M5598_RS24455 PF00884 Sulfatase M5598_RS24465 PF00817 impB/mucB/samB family M5598_RS24465 PF11799 impB/mucB/samB family C-terminal domain M5598_RS24465 PF11798 IMS family HHH motif M5598_RS24465 PF13438 Domain of unknown function (DUF4113) M5598_RS24525 PF00334 Nucleoside diphosphate kinase M5598_RS24595 PF12323 Helix-turn-helix domain M5598_RS24670 PF01367 5'-3' exonuclease, C-terminal SAM fold M5598_RS24670 PF01612 3'-5' exonuclease M5598_RS24670 PF00476 DNA polymerase family A M5598_RS24670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M5598_RS24710 PF00303 Thymidylate synthase M5598_RS24780 PF02146 Sir2 family M5598_RS24815 PF00216 Bacterial DNA-binding protein M5598_RS24825 PF03167 Uracil DNA glycosylase superfamily M5598_RS24910 PF10138 vWA found in TerF C terminus M5598_RS24915 PF02601 Exonuclease VII, large subunit M5598_RS24915 PF13742 OB-fold nucleic acid binding domain M5598_RS24930 PF00186 Dihydrofolate reductase M5598_RS25180 PF01668 SmpB protein M5598_RS25190 PF00691 OmpA family M5598_RS25220 PF00216 Bacterial DNA-binding protein M5598_RS25260 PF00816 H-NS histone family M5598_RS25270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M5598_RS25295 PF01653 NAD-dependent DNA ligase adenylation domain M5598_RS25295 PF12826 Helix-hairpin-helix motif M5598_RS25295 PF00533 BRCA1 C Terminus (BRCT) domain M5598_RS25295 PF03120 NAD-dependent DNA ligase OB-fold domain M5598_RS25295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M5598_RS25305 PF01592 NifU-like N terminal domain M5598_RS25310 PF01521 Iron-sulphur cluster biosynthesis M5598_RS25325 PF00265 Thymidine kinase M5598_RS25350 PF00563 EAL domain M5598_RS25350 PF12792 CSS motif domain associated with EAL M5598_RS25370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M5598_RS25370 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M5598_RS25375 PF01467 Cytidylyltransferase-like M5598_RS25380 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M5598_RS25415 PF02086 D12 class N6 adenine-specific DNA methyltransferase M5598_RS25435 PF04264 YceI-like domain M5598_RS25440 PF01292 Prokaryotic cytochrome b561 M5598_RS25465 PF00317 Ribonucleotide reductase, all-alpha domain M5598_RS25465 PF03477 ATP cone domain M5598_RS25465 PF02867 Ribonucleotide reductase, barrel domain M5598_RS25470 PF00268 Ribonucleotide reductase, small chain M5598_RS25490 PF02342 TerD domain M5598_RS25505 PF11202 Phosphoribosyl transferase (PRTase) M5598_RS25505 PF15608 PELOTA RNA binding domain M5598_RS25520 PF02342 TerD domain M5598_RS25525 PF02342 TerD domain M5598_RS25535 PF18073 Rubredoxin metal binding domain M5598_RS25560 PF00563 EAL domain M5598_RS25560 PF08668 HDOD domain M5598_RS25575 PF00990 Diguanylate cyclase, GGDEF domain M5598_RS25890 PF13361 UvrD-like helicase C-terminal domain M5598_RS25890 PF00580 UvrD/REP helicase N-terminal domain M5598_RS25905 PF00266 Aminotransferase class-V M5598_RS26005 PF04362 Bacterial Fe(2+) trafficking M5598_RS26085 PF02559 CarD-like/TRCF domain M5598_RS26085 PF17757 UvrB interaction domain M5598_RS26085 PF00271 Helicase conserved C-terminal domain M5598_RS26085 PF00270 DEAD/DEAH box helicase M5598_RS26085 PF03461 TRCF domain M5598_RS26105 PF06750 Bacterial Peptidase A24 N-terminal domain M5598_RS26105 PF01478 Type IV leader peptidase family M5598_RS26140 PF00211 Adenylate and Guanylate cyclase catalytic domain M5598_RS26150 PF02810 SEC-C motif M5598_RS26150 PF07517 SecA DEAD-like domain M5598_RS26150 PF01043 SecA preprotein cross-linking domain M5598_RS26150 PF07516 SecA Wing and Scaffold domain M5598_RS26160 PF01966 HD domain M5598_RS26180 PF02463 RecF/RecN/SMC N terminal domain M5598_RS26215 PF04381 Putative exonuclease, RdgC M5598_RS26285 PF00437 Type II/IV secretion system protein M5598_RS26315 PF02223 Thymidylate kinase M5598_RS26320 PF00270 DEAD/DEAH box helicase M5598_RS26320 PF00271 Helicase conserved C-terminal domain M5598_RS26320 PF00570 HRDC domain M5598_RS26320 PF09382 RQC domain M5598_RS26320 PF16124 RecQ zinc-binding M5598_RS26330 PF13538 UvrD-like helicase C-terminal domain M5598_RS26340 PF17768 RecJ OB domain M5598_RS26340 PF02272 DHHA1 domain M5598_RS26340 PF01368 DHH family M5598_RS26360 PF02163 Peptidase family M50 M5598_RS26360 PF17820 PDZ domain M5598_RS26370 PF00929 Exonuclease M5598_RS26375 PF03796 DnaB-like helicase C terminal domain M5598_RS26375 PF00772 DnaB-like helicase N terminal domain M5598_RS26380 PF07733 Bacterial DNA polymerase III alpha NTPase domain M5598_RS26380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M5598_RS26380 PF14579 Helix-hairpin-helix motif M5598_RS26380 PF02811 PHP domain M5598_RS26380 PF01336 OB-fold nucleic acid binding domain M5598_RS26395 PF01521 Iron-sulphur cluster biosynthesis M5598_RS26400 PF17191 RecG wedge domain M5598_RS26400 PF00271 Helicase conserved C-terminal domain M5598_RS26400 PF00270 DEAD/DEAH box helicase M5598_RS26420 PF05231 MASE1 M5598_RS26420 PF00563 EAL domain M5598_RS26425 PF01751 Toprim domain M5598_RS26425 PF01131 DNA topoisomerase M5598_RS26435 PF00580 UvrD/REP helicase N-terminal domain M5598_RS26435 PF13361 UvrD-like helicase C-terminal domain M5598_RS26445 PF02463 RecF/RecN/SMC N terminal domain M5598_RS26485 PF01367 5'-3' exonuclease, C-terminal SAM fold M5598_RS26485 PF00476 DNA polymerase family A M5598_RS26485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M5598_RS26490 PF10431 C-terminal, D2-small domain, of ClpB protein M5598_RS26490 PF07724 AAA domain (Cdc48 subfamily) M5598_RS26490 PF06689 ClpX C4-type zinc finger M5598_RS26505 PF01751 Toprim domain M5598_RS26505 PF01131 DNA topoisomerase M5598_RS26505 PF01396 Topoisomerase DNA binding C4 zinc finger M5598_RS26550 PF00929 Exonuclease M5598_RS26550 PF08411 Exonuclease C-terminal M5598_RS26600 PF13186 Iron-sulfur cluster-binding domain M5598_RS26600 PF04055 Radical SAM superfamily M5598_RS26610 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M5598_RS26610 PF00437 Type II/IV secretion system protein M5598_RS26625 PF00437 Type II/IV secretion system protein M5598_RS26640 PF00263 Bacterial type II and III secretion system protein M5598_RS26640 PF07655 Secretin N-terminal domain M5598_RS26650 PF00437 Type II/IV secretion system protein M5598_RS26715 PF00154 recA bacterial DNA recombination protein M5598_RS26900 PF00462 Glutaredoxin M5598_RS26900 PF08534 Redoxin M5598_RS27155 PF01661 Macro domain M5598_RS27235 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M5598_RS27235 PF00437 Type II/IV secretion system protein M5598_RS27250 PF13657 HipA N-terminal domain M5598_RS27250 PF07804 HipA-like C-terminal domain M5598_RS27380 PF02631 RecX family M5598_RS27385 PF12729 Four helix bundle sensory module for signal transduction M5598_RS27385 PF00672 HAMP domain M5598_RS27385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS27450 PF00009 Elongation factor Tu GTP binding domain M5598_RS27450 PF03144 Elongation factor Tu domain 2 M5598_RS27450 PF03143 Elongation factor Tu C-terminal domain M5598_RS27455 PF06463 Molybdenum Cofactor Synthesis C M5598_RS27455 PF04055 Radical SAM superfamily M5598_RS27465 PF00550 Phosphopantetheine attachment site M5598_RS27520 PF13307 Helicase C-terminal domain M5598_RS27520 PF06733 DEAD_2 M5598_RS27560 PF01381 Helix-turn-helix M5598_RS27685 PF00293 NUDIX domain M5598_RS27820 PF00816 H-NS histone family M5598_RS27865 PF00293 NUDIX domain M5598_RS27875 PF01569 PAP2 superfamily M5598_RS27880 PF01569 PAP2 superfamily M5598_RS27915 PF00436 Single-strand binding protein family M5598_RS28090 PF00113 Enolase, C-terminal TIM barrel domain M5598_RS28090 PF03952 Enolase, N-terminal domain M5598_RS28140 PF02743 Cache domain M5598_RS28140 PF00672 HAMP domain M5598_RS28140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5598_RS28270 PF05360 yiaA/B two helix domain M5598_RS28425 PF00005 ABC transporter M5598_RS28665 PF03477 ATP cone domain M5598_RS28665 PF13597 Anaerobic ribonucleoside-triphosphate reductase M5598_RS28915 PF00625 Guanylate kinase M5598_RS29065 PF02195 ParB-like nuclease domain M5598_RS29065 PF18090 Centromere-binding protein HTH domain M5598_RS29080 PF02146 Sir2 family M5598_RS29120 PF03741 Integral membrane protein TerC family M5598_RS29155 PF03747 ADP-ribosylglycohydrolase M5598_RS29180 PF01595 Cyclin M transmembrane N-terminal domain M5598_RS29180 PF00571 CBS domain M5598_RS29225 PF00216 Bacterial DNA-binding protein M5598_RS29230 PF00462 Glutaredoxin M5598_RS29235 PF13614 AAA domain M5598_RS29265 PF01228 Glycine radical M5598_RS29295 PF01966 HD domain M5598_RS29295 PF01743 Poly A polymerase head domain M5598_RS29295 PF12627 Probable RNA and SrmB- binding site of polymerase A M5598_RS29330 PF00313 'Cold-shock' DNA-binding domain