AL464_RS00025	SM00047	Lysozyme subfamily 2
AL464_RS00075	SM00138	Methyltransferase, chemotaxis proteins 
AL464_RS00080	SM00260	Two component signalling adaptor domain
AL464_RS00080	SM00448	cheY-homologous receiver domain
AL464_RS00085	SM00858	AL464_RS00085
AL464_RS00175	SM01081	Putative carbohydrate binding domain
AL464_RS00200	SM00463	Small MutS-related domain
AL464_RS00205	SM00363	S4 RNA-binding domain
AL464_RS00240	SM00937	AL464_RS00240
AL464_RS00260	SM01400	AL464_RS00260
AL464_RS00395	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS00410	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS00410	SM01091	Transporter associated domain
AL464_RS00465	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL464_RS00480	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS00495	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS00505	SM00642	Alpha-amylase domain
AL464_RS00515	SM00354	helix_turn _helix lactose operon repressor
AL464_RS00530	SM00382	ATPases associated with a variety of cellular activities
AL464_RS00530	SM00930	AL464_RS00530
AL464_RS00560	SM00028	Tetratricopeptide repeats
AL464_RS00565	SM00267	diguanylate cyclase
AL464_RS00575	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL464_RS00575	SM00475	5'-3' exonuclease
AL464_RS00580	SM00477	DNA/RNA non-specific endonuclease
AL464_RS00580	SM00892	DNA/RNA non-specific endonuclease
AL464_RS00605	SM00981	AL464_RS00605
AL464_RS00630	SM00861	Transketolase, pyrimidine binding domain
AL464_RS00680	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AL464_RS00730	SM01211	AL464_RS00730
AL464_RS00740	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS00795	SM00271	DnaJ molecular chaperone homology domain
AL464_RS00985	SM00495	Chitin-binding domain type 3
AL464_RS01000	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS01000	SM01240	AL464_RS01000
AL464_RS01020	SM00382	ATPases associated with a variety of cellular activities
AL464_RS01025	SM00564	beta-propeller repeat
AL464_RS01045	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_RS01060	SM00562	AL464_RS01060
AL464_RS01085	SM00271	DnaJ molecular chaperone homology domain
AL464_RS01135	SM01323	AL464_RS01135
AL464_RS01150	SM00020	Trypsin-like serine protease
AL464_RS01160	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS01210	SM00382	ATPases associated with a variety of cellular activities
AL464_RS01240	SM00091	PAS domain
AL464_RS01240	SM00387	Histidine kinase-like ATPases
AL464_RS01240	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS01245	SM00448	cheY-homologous receiver domain
AL464_RS01245	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS01325	SM00382	ATPases associated with a variety of cellular activities
AL464_RS01325	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_RS01335	SM00363	S4 RNA-binding domain
AL464_RS01345	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS01355	SM00830	Chorismate mutase type II
AL464_RS01375	SM00382	ATPases associated with a variety of cellular activities
AL464_RS01395	SM00830	Chorismate mutase type II
AL464_RS01440	SM00448	cheY-homologous receiver domain
AL464_RS01440	SM00850	LytTr DNA-binding domain
AL464_RS01465	SM00904	Riboflavin kinase
AL464_RS01485	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_RS01505	SM01154	AL464_RS01505
AL464_RS01525	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL464_RS01540	SM00927	DNA mismatch repair enzyme MutH
AL464_RS01560	SM00382	ATPases associated with a variety of cellular activities
AL464_RS01605	SM00487	DEAD-like helicases superfamily
AL464_RS01605	SM00490	helicase superfamily c-terminal domain
AL464_RS01630	SM00986	Uracil DNA glycosylase superfamily
AL464_RS01630	SM00987	UreE urease accessory protein, C-terminal domain 
AL464_RS01640	SM00518	AP endonuclease family 2
AL464_RS01685	SM00448	cheY-homologous receiver domain
AL464_RS01685	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS01695	SM00073	Histidine Phosphotransfer domain
AL464_RS01695	SM00091	PAS domain
AL464_RS01695	SM00387	Histidine kinase-like ATPases
AL464_RS01695	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS01695	SM00448	cheY-homologous receiver domain
AL464_RS01700	SM00091	PAS domain
AL464_RS01700	SM00267	diguanylate cyclase
AL464_RS01705	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS01775	SM00851	MGS-like domain
AL464_RS01775	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL464_RS01780	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AL464_RS01795	SM00957	SecA DEAD-like domain
AL464_RS01795	SM00958	SecA preprotein cross-linking domain
AL464_RS01810	SM00864	Tubulin/FtsZ family, GTPase domain
AL464_RS01810	SM00865	Tubulin/FtsZ family, C-terminal domain
AL464_RS01815	SM00842	Cell division protein FtsA
AL464_RS01905	SM00749	bacterial OsmY and nodulation domain
AL464_RS01965	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL464_RS01970	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL464_RS01975	SM00434	DNA Topoisomerase IV
AL464_RS01980	SM00387	Histidine kinase-like ATPases
AL464_RS01980	SM00433	TopoisomeraseII
AL464_RS02020	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS02030	SM00880	AL464_RS02030
AL464_RS02030	SM01118	AL464_RS02030
AL464_RS02045	SM00287	Bacterial SH3 domain homologues
AL464_RS02055	SM00382	ATPases associated with a variety of cellular activities
AL464_RS02075	SM00905	Dihydroneopterin aldolase
AL464_RS02080	SM01207	AL464_RS02080
AL464_RS02105	SM00400	zinc finger
AL464_RS02105	SM00493	AL464_RS02105
AL464_RS02105	SM00766	DNA primase DnaG DnaB-binding
AL464_RS02145	SM00563	Phosphate acyltransferases
AL464_RS02175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS02175	SM00387	Histidine kinase-like ATPases
AL464_RS02175	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS02180	SM00448	cheY-homologous receiver domain
AL464_RS02180	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS02195	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL464_RS02195	SM01134	AL464_RS02195
AL464_RS02210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS02215	SM00267	diguanylate cyclase
AL464_RS02255	SM00917	LeuA allosteric (dimerisation) domain
AL464_RS02260	SM01329	AL464_RS02260
AL464_RS02280	SM00271	DnaJ molecular chaperone homology domain
AL464_RS02300	SM00650	Ribosomal RNA adenine dimethylases
AL464_RS02390	SM00382	ATPases associated with a variety of cellular activities
AL464_RS02475	SM00382	ATPases associated with a variety of cellular activities
AL464_RS02535	SM00487	DEAD-like helicases superfamily
AL464_RS02535	SM00490	helicase superfamily c-terminal domain
AL464_RS02565	SM00662	RNA polymerases D
AL464_RS02570	SM00363	S4 RNA-binding domain
AL464_RS02570	SM01390	AL464_RS02570
AL464_RS02635	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL464_RS02640	SM01374	AL464_RS02640
AL464_RS02660	SM00322	K homology RNA-binding domain
AL464_RS02675	SM01382	AL464_RS02675
AL464_RS02675	SM01383	AL464_RS02675
AL464_RS02695	SM01403	AL464_RS02695
AL464_RS02710	SM00487	DEAD-like helicases superfamily
AL464_RS02710	SM00490	helicase superfamily c-terminal domain
AL464_RS02715	SM00354	helix_turn _helix lactose operon repressor
AL464_RS02730	SM00382	ATPases associated with a variety of cellular activities
AL464_RS02730	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_RS02785	SM00849	Metallo-beta-lactamase superfamily
AL464_RS02785	SM01027	Beta-Casp domain
AL464_RS02790	SM00984	UDP binding domain
AL464_RS02870	SM00858	AL464_RS02870
AL464_RS03020	SM00672	Putative lipopolysaccharide-modifying enzyme.
AL464_RS03030	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL464_RS03030	SM01232	AL464_RS03030
AL464_RS03055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS03055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS03055	SM01049	AL464_RS03055
AL464_RS03160	SM00267	diguanylate cyclase
AL464_RS03170	SM00382	ATPases associated with a variety of cellular activities
AL464_RS03175	SM00382	ATPases associated with a variety of cellular activities
AL464_RS03230	SM00028	Tetratricopeptide repeats
AL464_RS03235	SM00072	Guanylate kinase homologues.
AL464_RS03240	SM01409	AL464_RS03240
AL464_RS03245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS03245	SM00954	Region found in RelA / SpoT proteins
AL464_RS03255	SM00487	DEAD-like helicases superfamily
AL464_RS03255	SM00490	helicase superfamily c-terminal domain
AL464_RS03270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS03270	SM00387	Histidine kinase-like ATPases
AL464_RS03270	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS03275	SM00448	cheY-homologous receiver domain
AL464_RS03275	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS03295	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS03295	SM00732	Likely ribonuclease with RNase H fold.
AL464_RS03375	SM00382	ATPases associated with a variety of cellular activities
AL464_RS03390	SM00363	S4 RNA-binding domain
AL464_RS03440	SM01230	AL464_RS03440
AL464_RS03450	SM00091	PAS domain
AL464_RS03450	SM00387	Histidine kinase-like ATPases
AL464_RS03450	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS03455	SM00382	ATPases associated with a variety of cellular activities
AL464_RS03455	SM00448	cheY-homologous receiver domain
AL464_RS03460	SM00052	Putative diguanylate phosphodiesterase
AL464_RS03460	SM00267	diguanylate cyclase
AL464_RS03460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS03470	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS03515	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL464_RS03515	SM00474	3'-5' exonuclease
AL464_RS03515	SM00475	5'-3' exonuclease
AL464_RS03515	SM00482	DNA polymerase A domain
AL464_RS03530	SM01004	Delta-aminolevulinic acid dehydratase
AL464_RS03590	SM00052	Putative diguanylate phosphodiesterase
AL464_RS03590	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_RS03590	SM00091	PAS domain
AL464_RS03590	SM00267	diguanylate cyclase
AL464_RS03625	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL464_RS03625	SM00195	Dual specificity phosphatase, catalytic domain
AL464_RS03625	SM00404	Protein tyrosine phosphatase, catalytic domain motif
AL464_RS03645	SM00749	bacterial OsmY and nodulation domain
AL464_RS03650	SM00382	ATPases associated with a variety of cellular activities
AL464_RS03690	SM00052	Putative diguanylate phosphodiesterase
AL464_RS03690	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_RS03690	SM00091	PAS domain
AL464_RS03690	SM00267	diguanylate cyclase
AL464_RS03695	SM00344	helix_turn_helix ASNC type
AL464_RS03765	SM00354	helix_turn _helix lactose operon repressor
AL464_RS03770	SM00220	Serine/Threonine protein kinases, catalytic domain
AL464_RS03820	SM00382	ATPases associated with a variety of cellular activities
AL464_RS03970	SM00829	Enoylreductase
AL464_RS04010	SM00642	Alpha-amylase domain
AL464_RS04040	SM00387	Histidine kinase-like ATPases
AL464_RS04040	SM00433	TopoisomeraseII
AL464_RS04050	SM00480	DNA polymerase III beta subunit
AL464_RS04055	SM00382	ATPases associated with a variety of cellular activities
AL464_RS04055	SM00760	Bacterial dnaA protein helix-turn-helix domain
AL464_RS04070	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS04070	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL464_RS04080	SM00382	ATPases associated with a variety of cellular activities
AL464_RS04095	SM01234	AL464_RS04095
AL464_RS04115	SM01228	AL464_RS04115
AL464_RS04130	SM00470	ParB-like nuclease domain
AL464_RS04170	SM00382	ATPases associated with a variety of cellular activities
AL464_RS04190	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS04230	SM00382	ATPases associated with a variety of cellular activities
AL464_RS04240	SM00563	Phosphate acyltransferases
AL464_RS04310	SM00257	Lysin motif
AL464_RS04335	SM01001	AIR carboxylase
AL464_RS04455	SM00876	Biotin and Thiamin Synthesis associated domain
AL464_RS04520	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS04530	SM00341	Helicase and RNase D C-terminal
AL464_RS04530	SM00487	DEAD-like helicases superfamily
AL464_RS04530	SM00490	helicase superfamily c-terminal domain
AL464_RS04530	SM00956	AL464_RS04530
AL464_RS04555	SM00487	DEAD-like helicases superfamily
AL464_RS04555	SM00490	helicase superfamily c-terminal domain
AL464_RS04565	SM00357	Cold shock protein domain
AL464_RS04565	SM00382	ATPases associated with a variety of cellular activities
AL464_RS04565	SM00959	Rho termination factor, N-terminal domain
AL464_RS04670	SM00028	Tetratricopeptide repeats
AL464_RS04695	SM01219	AL464_RS04695
AL464_RS04730	SM00052	Putative diguanylate phosphodiesterase
AL464_RS04730	SM00897	FIST N domain
AL464_RS04730	SM01204	AL464_RS04730
AL464_RS04735	SM01144	AL464_RS04735
AL464_RS04770	SM00052	Putative diguanylate phosphodiesterase
AL464_RS04775	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_RS04780	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL464_RS04850	SM00382	ATPases associated with a variety of cellular activities
AL464_RS04850	SM00962	SRP54-type protein, GTPase domain
AL464_RS04850	SM00963	SRP54-type protein, helical bundle domain
AL464_RS04855	SM00382	ATPases associated with a variety of cellular activities
AL464_RS04875	SM00450	Rhodanese Homology Domain
AL464_RS04900	SM00563	Phosphate acyltransferases
AL464_RS04965	SM00360	RNA recognition motif
AL464_RS04990	SM00155	Phospholipase D. Active site motifs.
AL464_RS05050	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL464_RS05050	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL464_RS05055	SM00649	Ribosomal protein L11/L12
AL464_RS05080	SM00663	RNA polymerase I subunit A N-terminus
AL464_RS05110	SM00986	Uracil DNA glycosylase superfamily
AL464_RS05110	SM00987	UreE urease accessory protein, C-terminal domain 
AL464_RS05130	SM00411	bacterial (prokaryotic) histone like domain
AL464_RS05140	SM01209	AL464_RS05140
AL464_RS05140	SM01210	AL464_RS05140
AL464_RS05150	SM00798	AICARFT/IMPCHase bienzyme
AL464_RS05150	SM00851	MGS-like domain
AL464_RS05160	SM00422	helix_turn_helix, mercury resistance
AL464_RS05165	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS05340	SM01018	B12 binding domain
AL464_RS05375	SM00421	helix_turn_helix, Lux Regulon
AL464_RS05385	SM00052	Putative diguanylate phosphodiesterase
AL464_RS05385	SM00267	diguanylate cyclase
AL464_RS05405	SM00965	Secretin and TonB N terminus short domain
AL464_RS05415	SM00028	Tetratricopeptide repeats
AL464_RS05420	SM00382	ATPases associated with a variety of cellular activities
AL464_RS05490	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS05510	SM00670	Large family of predicted nucleotide-binding domains
AL464_RS05515	SM00487	DEAD-like helicases superfamily
AL464_RS05515	SM00490	helicase superfamily c-terminal domain
AL464_RS05550	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS05550	SM00924	MgtE intracellular N domain
AL464_RS05580	SM00382	ATPases associated with a variety of cellular activities
AL464_RS05595	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS05605	SM00382	ATPases associated with a variety of cellular activities
AL464_RS05640	SM00563	Phosphate acyltransferases
AL464_RS05690	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_RS05815	SM00487	DEAD-like helicases superfamily
AL464_RS05830	SM00495	Chitin-binding domain type 3
AL464_RS05860	SM00354	helix_turn _helix lactose operon repressor
AL464_RS05865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS05915	SM00267	diguanylate cyclase
AL464_RS05920	SM00382	ATPases associated with a variety of cellular activities
AL464_RS05950	SM00878	Biotin carboxylase C-terminal domain
AL464_RS05970	SM00479	AL464_RS05970
AL464_RS05985	SM00387	Histidine kinase-like ATPases
AL464_RS05985	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS05985	SM00448	cheY-homologous receiver domain
AL464_RS06020	SM01091	Transporter associated domain
AL464_RS06025	SM00421	helix_turn_helix, Lux Regulon
AL464_RS06025	SM00448	cheY-homologous receiver domain
AL464_RS06060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS06060	SM00387	Histidine kinase-like ATPases
AL464_RS06060	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS06065	SM00448	cheY-homologous receiver domain
AL464_RS06065	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS06095	SM00883	Chaperonin 10 Kd subunit
AL464_RS06115	SM01005	Alanine racemase, C-terminal domain
AL464_RS06135	SM00841	Elongation factor P, C-terminal
AL464_RS06135	SM01185	AL464_RS06135
AL464_RS06195	SM00971	Serine acetyltransferase, N-terminal
AL464_RS06210	SM00450	Rhodanese Homology Domain
AL464_RS06225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS06225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS06245	SM00479	AL464_RS06245
AL464_RS06325	SM00257	Lysin motif
AL464_RS06325	SM00646	AL464_RS06325
AL464_RS06330	SM00853	MutL C terminal dimerisation domain
AL464_RS06330	SM01340	AL464_RS06330
AL464_RS06350	SM00244	prohibitin homologues
AL464_RS06355	SM00244	prohibitin homologues
AL464_RS06365	SM00788	Adenylosuccinate synthetase
AL464_RS06375	SM00671	Sel1-like repeats.
AL464_RS06390	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS06390	SM00357	Cold shock protein domain
AL464_RS06390	SM00955	AL464_RS06390
AL464_RS06395	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AL464_RS06455	SM01150	AL464_RS06455
AL464_RS06460	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_RS06460	SM00419	helix_turn_helix, cAMP Regulatory protein
AL464_RS06485	SM00382	ATPases associated with a variety of cellular activities
AL464_RS06530	SM00320	WD40 repeats
AL464_RS06570	SM00838	Elongation factor G C-terminus
AL464_RS06570	SM00889	Elongation factor G, domain IV
AL464_RS06590	SM00919	Malic enzyme, NAD binding domain
AL464_RS06590	SM01274	AL464_RS06590
AL464_RS06630	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL464_RS06695	SM00965	Secretin and TonB N terminus short domain
AL464_RS06755	SM01005	Alanine racemase, C-terminal domain
AL464_RS06910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS06910	SM01049	AL464_RS06910
AL464_RS06960	SM00478	endonuclease III
AL464_RS06960	SM00525	AL464_RS06960
AL464_RS06980	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS06995	SM01152	AL464_RS06995
AL464_RS07025	SM00732	Likely ribonuclease with RNase H fold.
AL464_RS07050	SM00731	SprT homologues.
AL464_RS07070	SM00861	Transketolase, pyrimidine binding domain
AL464_RS07085	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL464_RS07225	SM00838	Elongation factor G C-terminus
AL464_RS07235	SM00358	Double-stranded RNA binding motif
AL464_RS07235	SM00535	Ribonuclease III family
AL464_RS07260	SM00073	Histidine Phosphotransfer domain
AL464_RS07260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS07260	SM00387	Histidine kinase-like ATPases
AL464_RS07260	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS07260	SM00448	cheY-homologous receiver domain
AL464_RS07280	SM00954	Region found in RelA / SpoT proteins
AL464_RS07295	SM01192	AL464_RS07295
AL464_RS07295	SM01193	AL464_RS07295
AL464_RS07330	SM00257	Lysin motif
AL464_RS07340	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AL464_RS07340	SM00534	ATPase domain of DNA mismatch repair MUTS family
AL464_RS07350	SM00382	ATPases associated with a variety of cellular activities
AL464_RS07360	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL464_RS07430	SM00829	Enoylreductase
AL464_RS07460	SM01091	Transporter associated domain
AL464_RS07470	SM00382	ATPases associated with a variety of cellular activities
AL464_RS07470	SM00962	SRP54-type protein, GTPase domain
AL464_RS07470	SM00963	SRP54-type protein, helical bundle domain
AL464_RS07535	SM00644	AL464_RS07535
AL464_RS07540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS07540	SM00895	AL464_RS07540
AL464_RS07570	SM00947	Carbonic anhydrase
AL464_RS07585	SM00382	ATPases associated with a variety of cellular activities
AL464_RS07655	SM00487	DEAD-like helicases superfamily
AL464_RS07655	SM00490	helicase superfamily c-terminal domain
AL464_RS07655	SM00847	Helicase associated domain (HA2)  Add an annotation
AL464_RS07680	SM00938	Nitrogen regulatory protein P-II
AL464_RS07700	SM00382	ATPases associated with a variety of cellular activities
AL464_RS07710	SM01068	Putative carbohydrate binding domain
AL464_RS07730	SM00382	ATPases associated with a variety of cellular activities
AL464_RS07735	SM00382	ATPases associated with a variety of cellular activities
AL464_RS07755	SM00091	PAS domain
AL464_RS07755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS07755	SM00387	Histidine kinase-like ATPases
AL464_RS07755	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS07755	SM00448	cheY-homologous receiver domain
AL464_RS07825	SM01103	AL464_RS07825
AL464_RS07835	SM00382	ATPases associated with a variety of cellular activities
AL464_RS07875	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS07895	SM01387	AL464_RS07895
AL464_RS07900	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS07900	SM00322	K homology RNA-binding domain
AL464_RS07905	SM00028	Tetratricopeptide repeats
AL464_RS07910	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_RS07930	SM00052	Putative diguanylate phosphodiesterase
AL464_RS07930	SM00091	PAS domain
AL464_RS07930	SM00267	diguanylate cyclase
AL464_RS07980	SM01133	AL464_RS07980
AL464_RS07985	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AL464_RS08015	SM00382	ATPases associated with a variety of cellular activities
AL464_RS08020	SM00838	Elongation factor G C-terminus
AL464_RS08020	SM00889	Elongation factor G, domain IV
AL464_RS08040	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS08055	SM00382	ATPases associated with a variety of cellular activities
AL464_RS08060	SM00858	AL464_RS08060
AL464_RS08110	SM00028	Tetratricopeptide repeats
AL464_RS08140	SM01038	Beta galactosidase small chain
AL464_RS08145	SM00354	helix_turn _helix lactose operon repressor
AL464_RS08180	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS08185	SM00479	AL464_RS08185
AL464_RS08190	SM00354	helix_turn _helix lactose operon repressor
AL464_RS08320	SM00925	MltA specific insert domain
AL464_RS08335	SM00267	diguanylate cyclase
AL464_RS08365	SM00464	Found in ATP-dependent protease La (LON)
AL464_RS08425	SM00900	AL464_RS08425
AL464_RS08465	SM00487	DEAD-like helicases superfamily
AL464_RS08465	SM00490	helicase superfamily c-terminal domain
AL464_RS08480	SM00495	Chitin-binding domain type 3
AL464_RS08480	SM00636	AL464_RS08480
AL464_RS08575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS08620	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL464_RS08630	SM00935	Outer membrane protein (OmpH-like)
AL464_RS08660	SM00481	DNA polymerase alpha chain like domain
AL464_RS08670	SM00977	TilS substrate C-terminal domain
AL464_RS08680	SM00938	Nitrogen regulatory protein P-II
AL464_RS08695	SM00257	Lysin motif
AL464_RS08700	SM00849	Metallo-beta-lactamase superfamily
AL464_RS08715	SM00479	AL464_RS08715
AL464_RS08810	SM01130	AL464_RS08810
AL464_RS08910	SM00382	ATPases associated with a variety of cellular activities
AL464_RS08915	SM00387	Histidine kinase-like ATPases
AL464_RS08915	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS08920	SM00382	ATPases associated with a variety of cellular activities
AL464_RS08920	SM00448	cheY-homologous receiver domain
AL464_RS08945	SM00382	ATPases associated with a variety of cellular activities
AL464_RS09005	SM00382	ATPases associated with a variety of cellular activities
AL464_RS09005	SM00962	SRP54-type protein, GTPase domain
AL464_RS09020	SM00448	cheY-homologous receiver domain
AL464_RS09030	SM00073	Histidine Phosphotransfer domain
AL464_RS09030	SM00260	Two component signalling adaptor domain
AL464_RS09030	SM00387	Histidine kinase-like ATPases
AL464_RS09030	SM01231	AL464_RS09030
AL464_RS09035	SM00448	cheY-homologous receiver domain
AL464_RS09045	SM00260	Two component signalling adaptor domain
AL464_RS09050	SM00260	Two component signalling adaptor domain
AL464_RS09060	SM00382	ATPases associated with a variety of cellular activities
AL464_RS09155	SM00855	Phosphoglycerate mutase family
AL464_RS09160	SM00463	Small MutS-related domain
AL464_RS09210	SM00825	Beta-ketoacyl synthase
AL464_RS09225	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL464_RS09275	SM00448	cheY-homologous receiver domain
AL464_RS09295	SM00382	ATPases associated with a variety of cellular activities
AL464_RS09305	SM00493	AL464_RS09305
AL464_RS09370	SM00098	Alkaline phosphatase homologues
AL464_RS09395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS09405	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL464_RS09425	SM00870	AL464_RS09425
AL464_RS09445	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL464_RS09445	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL464_RS09445	SM00493	AL464_RS09445
AL464_RS09505	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL464_RS09555	SM00479	AL464_RS09555
AL464_RS09585	SM00478	endonuclease III
AL464_RS09585	SM00525	AL464_RS09585
AL464_RS09595	SM00900	AL464_RS09595
AL464_RS09630	SM00487	DEAD-like helicases superfamily
AL464_RS09630	SM00490	helicase superfamily c-terminal domain
AL464_RS09635	SM00382	ATPases associated with a variety of cellular activities
AL464_RS09635	SM00448	cheY-homologous receiver domain
AL464_RS09650	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS09655	SM00852	Probable molybdopterin binding domain
AL464_RS09690	SM00382	ATPases associated with a variety of cellular activities
AL464_RS09695	SM00382	ATPases associated with a variety of cellular activities
AL464_RS09740	SM00382	ATPases associated with a variety of cellular activities
AL464_RS09745	SM00642	Alpha-amylase domain
AL464_RS09750	SM00267	diguanylate cyclase
AL464_RS09775	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS09810	SM00226	Low molecular weight phosphatase family
AL464_RS09825	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS09840	SM00363	S4 RNA-binding domain
AL464_RS09870	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AL464_RS09875	SM00822	AL464_RS09875
AL464_RS09885	SM00825	Beta-ketoacyl synthase
AL464_RS09965	SM00260	Two component signalling adaptor domain
AL464_RS09965	SM00448	cheY-homologous receiver domain
AL464_RS09970	SM00481	DNA polymerase alpha chain like domain
AL464_RS09985	SM00822	AL464_RS09985
AL464_RS10000	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS10005	SM00411	bacterial (prokaryotic) histone like domain
AL464_RS10015	SM00028	Tetratricopeptide repeats
AL464_RS10020	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL464_RS10080	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_RS10095	SM00387	Histidine kinase-like ATPases
AL464_RS10095	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS10100	SM00421	helix_turn_helix, Lux Regulon
AL464_RS10100	SM00448	cheY-homologous receiver domain
AL464_RS10170	SM00382	ATPases associated with a variety of cellular activities
AL464_RS10180	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS10220	SM00220	Serine/Threonine protein kinases, catalytic domain
AL464_RS10220	SM00364	Leucine-rich repeats, bacterial type
AL464_RS10220	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AL464_RS10225	SM00387	Histidine kinase-like ATPases
AL464_RS10225	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS10230	SM00448	cheY-homologous receiver domain
AL464_RS10230	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS10240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS10240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS10245	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS10250	SM00052	Putative diguanylate phosphodiesterase
AL464_RS10250	SM00091	PAS domain
AL464_RS10305	SM00387	Histidine kinase-like ATPases
AL464_RS10305	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS10305	SM00448	cheY-homologous receiver domain
AL464_RS10330	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_RS10330	SM00419	helix_turn_helix, cAMP Regulatory protein
AL464_RS10370	SM00481	DNA polymerase alpha chain like domain
AL464_RS10385	SM00363	S4 RNA-binding domain
AL464_RS10400	SM00841	Elongation factor P, C-terminal
AL464_RS10400	SM01185	AL464_RS10400
AL464_RS10410	SM00486	DNA polymerase type-B family
AL464_RS10415	SM00421	helix_turn_helix, Lux Regulon
AL464_RS10415	SM00448	cheY-homologous receiver domain
AL464_RS10420	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL464_RS10420	SM00465	GIY-YIG type nucleases (URI domain)
AL464_RS10475	SM00852	Probable molybdopterin binding domain
AL464_RS10500	SM00434	DNA Topoisomerase IV
AL464_RS10590	SM00849	Metallo-beta-lactamase superfamily
AL464_RS10620	SM00387	Histidine kinase-like ATPases
AL464_RS10620	SM01049	AL464_RS10620
AL464_RS10625	SM00421	helix_turn_helix, Lux Regulon
AL464_RS10625	SM00448	cheY-homologous receiver domain
AL464_RS10630	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_RS10640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS10640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS10645	SM00479	AL464_RS10645
AL464_RS10650	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_RS10650	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS10685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS10700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS10700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS10715	SM00052	Putative diguanylate phosphodiesterase
AL464_RS10740	SM00387	Histidine kinase-like ATPases
AL464_RS10740	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS10740	SM00448	cheY-homologous receiver domain
AL464_RS10775	SM00091	PAS domain
AL464_RS10775	SM00382	ATPases associated with a variety of cellular activities
AL464_RS11055	SM00357	Cold shock protein domain
AL464_RS11620	SM01252	AL464_RS11620
AL464_RS11770	SM00871	Bacterial transcription activator, effector binding domain
AL464_RS12030	SM01230	AL464_RS12030
AL464_RS12045	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_RS12080	SM01131	AL464_RS12080
AL464_RS12090	SM00052	Putative diguanylate phosphodiesterase
AL464_RS12100	SM00635	Bacterial Ig-like domain 2
AL464_RS12105	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL464_RS12110	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS12120	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_RS12135	SM01118	AL464_RS12135
AL464_RS12145	SM01266	AL464_RS12145
AL464_RS12160	SM00387	Histidine kinase-like ATPases
AL464_RS12160	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS12160	SM00448	cheY-homologous receiver domain
AL464_RS12165	SM00052	Putative diguanylate phosphodiesterase
AL464_RS12165	SM00267	diguanylate cyclase
AL464_RS12165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS12175	SM00028	Tetratricopeptide repeats
AL464_RS12255	SM00387	Histidine kinase-like ATPases
AL464_RS12255	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS12260	SM00448	cheY-homologous receiver domain
AL464_RS12260	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS12270	SM00822	AL464_RS12270
AL464_RS12275	SM01236	AL464_RS12275
AL464_RS12300	SM00382	ATPases associated with a variety of cellular activities
AL464_RS12305	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_RS12305	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS12310	SM00479	AL464_RS12310
AL464_RS12370	SM00091	PAS domain
AL464_RS12370	SM00387	Histidine kinase-like ATPases
AL464_RS12375	SM00448	cheY-homologous receiver domain
AL464_RS12390	SM01350	AL464_RS12390
AL464_RS12405	SM00382	ATPases associated with a variety of cellular activities
AL464_RS12430	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS12605	SM00382	ATPases associated with a variety of cellular activities
AL464_RS12700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS12700	SM00895	AL464_RS12700
AL464_RS12735	SM00020	Trypsin-like serine protease
AL464_RS12735	SM00495	Chitin-binding domain type 3
AL464_RS12760	SM00028	Tetratricopeptide repeats
AL464_RS12760	SM00267	diguanylate cyclase
AL464_RS12780	SM00327	von Willebrand factor (vWF) type A domain
AL464_RS12800	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AL464_RS12805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS12830	SM00382	ATPases associated with a variety of cellular activities
AL464_RS12845	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS12885	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS12910	SM00382	ATPases associated with a variety of cellular activities
AL464_RS12920	SM00945	ProQ/FINO family
AL464_RS12925	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL464_RS12925	SM00245	tail specific protease
AL464_RS12965	SM00981	AL464_RS12965
AL464_RS12975	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13040	SM00387	Histidine kinase-like ATPases
AL464_RS13040	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS13040	SM00448	cheY-homologous receiver domain
AL464_RS13045	SM00897	FIST N domain
AL464_RS13045	SM01204	AL464_RS13045
AL464_RS13095	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_RS13095	SM00419	helix_turn_helix, cAMP Regulatory protein
AL464_RS13130	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13195	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_RS13235	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13245	SM00387	Histidine kinase-like ATPases
AL464_RS13245	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS13250	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13250	SM00448	cheY-homologous receiver domain
AL464_RS13270	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13280	SM00852	Probable molybdopterin binding domain
AL464_RS13295	SM01144	AL464_RS13295
AL464_RS13330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS13345	SM00267	diguanylate cyclase
AL464_RS13350	SM00448	cheY-homologous receiver domain
AL464_RS13415	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13415	SM00448	cheY-homologous receiver domain
AL464_RS13495	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13495	SM00487	DEAD-like helicases superfamily
AL464_RS13495	SM00490	helicase superfamily c-terminal domain
AL464_RS13495	SM00847	Helicase associated domain (HA2)  Add an annotation
AL464_RS13525	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_RS13550	SM00479	AL464_RS13550
AL464_RS13555	SM00267	diguanylate cyclase
AL464_RS13555	SM01079	AL464_RS13555
AL464_RS13600	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13605	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13645	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS13650	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AL464_RS13715	SM00240	Forkhead associated domain
AL464_RS13735	SM00344	helix_turn_helix ASNC type
AL464_RS13770	SM00220	Serine/Threonine protein kinases, catalytic domain
AL464_RS13805	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13805	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_RS13810	SM00382	ATPases associated with a variety of cellular activities
AL464_RS13865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS13870	SM00052	Putative diguanylate phosphodiesterase
AL464_RS13870	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_RS13870	SM00091	PAS domain
AL464_RS13870	SM00267	diguanylate cyclase
AL464_RS13875	SM00448	cheY-homologous receiver domain
AL464_RS13880	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_RS13880	SM00387	Histidine kinase-like ATPases
AL464_RS13900	SM00855	Phosphoglycerate mutase family
AL464_RS14035	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14040	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14055	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL464_RS14080	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14085	SM01130	AL464_RS14085
AL464_RS14130	SM00245	tail specific protease
AL464_RS14200	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14225	SM00855	Phosphoglycerate mutase family
AL464_RS14255	SM00479	AL464_RS14255
AL464_RS14290	SM00411	bacterial (prokaryotic) histone like domain
AL464_RS14305	SM00873	B3/4 domain
AL464_RS14305	SM00874	tRNA synthetase B5 domain
AL464_RS14305	SM00896	Ferredoxin-fold anticodon binding domain
AL464_RS14315	SM00267	diguanylate cyclase
AL464_RS14340	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_RS14365	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL464_RS14380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS14380	SM00866	AL464_RS14380
AL464_RS14470	SM00487	DEAD-like helicases superfamily
AL464_RS14470	SM00490	helicase superfamily c-terminal domain
AL464_RS14470	SM00847	Helicase associated domain (HA2)  Add an annotation
AL464_RS14475	SM00919	Malic enzyme, NAD binding domain
AL464_RS14475	SM01274	AL464_RS14475
AL464_RS14490	SM00267	diguanylate cyclase
AL464_RS14515	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14520	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14540	SM00100	Cyclic nucleotide-monophosphate binding domain
AL464_RS14540	SM00387	Histidine kinase-like ATPases
AL464_RS14545	SM00448	cheY-homologous receiver domain
AL464_RS14645	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14695	SM00363	S4 RNA-binding domain
AL464_RS14700	SM00487	DEAD-like helicases superfamily
AL464_RS14700	SM00490	helicase superfamily c-terminal domain
AL464_RS14710	SM00448	cheY-homologous receiver domain
AL464_RS14710	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS14715	SM00387	Histidine kinase-like ATPases
AL464_RS14760	SM00421	helix_turn_helix, Lux Regulon
AL464_RS14760	SM00448	cheY-homologous receiver domain
AL464_RS14765	SM00387	Histidine kinase-like ATPases
AL464_RS14765	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS14770	SM00450	Rhodanese Homology Domain
AL464_RS14800	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14820	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL464_RS14820	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS14845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS14855	SM00155	Phospholipase D. Active site motifs.
AL464_RS14910	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14930	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14935	SM00382	ATPases associated with a variety of cellular activities
AL464_RS14945	SM01131	AL464_RS14945
AL464_RS15020	SM00840	AL464_RS15020
AL464_RS15035	SM00052	Putative diguanylate phosphodiesterase
AL464_RS15090	SM00382	ATPases associated with a variety of cellular activities
AL464_RS15105	SM00528	Domain in histone-like proteins of HNS family
AL464_RS15205	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS15205	SM00876	Biotin and Thiamin Synthesis associated domain
AL464_RS15235	SM00382	ATPases associated with a variety of cellular activities
AL464_RS15245	SM00843	AL464_RS15245
AL464_RS15250	SM00344	helix_turn_helix ASNC type
AL464_RS15255	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL464_RS15255	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL464_RS15305	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_RS15330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS15330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS15345	SM00387	Histidine kinase-like ATPases
AL464_RS15345	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS15345	SM00448	cheY-homologous receiver domain
AL464_RS15380	SM00028	Tetratricopeptide repeats
AL464_RS15435	SM00382	ATPases associated with a variety of cellular activities
AL464_RS15440	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL464_RS15445	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS15525	SM00448	cheY-homologous receiver domain
AL464_RS15525	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS15535	SM00354	helix_turn _helix lactose operon repressor
AL464_RS15570	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL464_RS15570	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL464_RS15570	SM00493	AL464_RS15570
AL464_RS15600	SM00316	Ribosomal protein S1-like RNA-binding domain
AL464_RS15610	SM00382	ATPases associated with a variety of cellular activities
AL464_RS15610	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_RS15620	SM00357	Cold shock protein domain
AL464_RS15645	SM00491	AL464_RS15645
AL464_RS15670	SM01276	AL464_RS15670
AL464_RS15685	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS15685	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL464_RS15690	SM00382	ATPases associated with a variety of cellular activities
AL464_RS15740	SM00763	PrkA AAA domain
AL464_RS15770	SM00382	ATPases associated with a variety of cellular activities
AL464_RS15775	SM00849	Metallo-beta-lactamase superfamily
AL464_RS15790	SM00382	ATPases associated with a variety of cellular activities
AL464_RS15805	SM00487	DEAD-like helicases superfamily
AL464_RS15805	SM00490	helicase superfamily c-terminal domain
AL464_RS15805	SM00982	AL464_RS15805
AL464_RS15805	SM01058	CarD-like/TRCF domain
AL464_RS15860	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS15860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS15885	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS15915	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS15915	SM00267	diguanylate cyclase
AL464_RS15945	SM00344	helix_turn_helix ASNC type
AL464_RS16015	SM00978	AL464_RS16015
AL464_RS16025	SM00563	Phosphate acyltransferases
AL464_RS16045	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL464_RS16075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS16080	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS16085	SM01144	AL464_RS16085
AL464_RS16095	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL464_RS16105	SM00411	bacterial (prokaryotic) histone like domain
AL464_RS16110	SM00382	ATPases associated with a variety of cellular activities
AL464_RS16110	SM00464	Found in ATP-dependent protease La (LON)
AL464_RS16115	SM00382	ATPases associated with a variety of cellular activities
AL464_RS16115	SM00994	ClpX C4-type zinc finger
AL464_RS16115	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_RS16130	SM00387	Histidine kinase-like ATPases
AL464_RS16130	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS16135	SM00382	ATPases associated with a variety of cellular activities
AL464_RS16135	SM00448	cheY-homologous receiver domain
AL464_RS16170	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL464_RS16190	SM00487	DEAD-like helicases superfamily
AL464_RS16190	SM00490	helicase superfamily c-terminal domain
AL464_RS16195	SM01091	Transporter associated domain
AL464_RS16225	SM00563	Phosphate acyltransferases
AL464_RS16285	SM00825	Beta-ketoacyl synthase
AL464_RS16295	SM00822	AL464_RS16295
AL464_RS16300	SM00825	Beta-ketoacyl synthase
AL464_RS16355	SM00474	3'-5' exonuclease
AL464_RS16385	SM00487	DEAD-like helicases superfamily
AL464_RS16385	SM00491	AL464_RS16385
AL464_RS16405	SM00836	DALR anticodon binding domain
AL464_RS16405	SM01016	Arginyl tRNA synthetase N terminal dom
AL464_RS16425	SM00899	AL464_RS16425
AL464_RS16440	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS16450	SM00382	ATPases associated with a variety of cellular activities
AL464_RS16460	SM00881	CoA binding domain
AL464_RS16475	SM00861	Transketolase, pyrimidine binding domain
AL464_RS16585	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL464_RS16605	SM00387	Histidine kinase-like ATPases
AL464_RS16610	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS16640	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS16645	SM00938	Nitrogen regulatory protein P-II
AL464_RS16680	SM00244	prohibitin homologues
AL464_RS16710	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL464_RS16710	SM00292	breast cancer carboxy-terminal domain
AL464_RS16710	SM00532	Ligase N family
AL464_RS16715	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AL464_RS16815	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS16845	SM00382	ATPases associated with a variety of cellular activities
AL464_RS16875	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS16915	SM01276	AL464_RS16915
AL464_RS16920	SM00528	Domain in histone-like proteins of HNS family
AL464_RS16935	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS16940	SM00382	ATPases associated with a variety of cellular activities
AL464_RS16945	SM00382	ATPases associated with a variety of cellular activities
AL464_RS16985	SM00988	UreE urease accessory protein, N-terminal domain
AL464_RS17015	SM00635	Bacterial Ig-like domain 2
AL464_RS17045	SM00382	ATPases associated with a variety of cellular activities
AL464_RS17105	SM00822	AL464_RS17105
AL464_RS17120	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS17125	SM00917	LeuA allosteric (dimerisation) domain
AL464_RS17160	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL464_RS17175	SM00020	Trypsin-like serine protease
AL464_RS17205	SM00357	Cold shock protein domain
AL464_RS17225	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_RS17270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS17270	SM00387	Histidine kinase-like ATPases
AL464_RS17270	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS17275	SM00448	cheY-homologous receiver domain
AL464_RS17275	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS17290	SM01065	Starch binding domain
AL464_RS17330	SM00563	Phosphate acyltransferases
AL464_RS17340	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_RS17345	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS17365	SM00924	MgtE intracellular N domain
AL464_RS17380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS17395	SM00344	helix_turn_helix ASNC type
AL464_RS17415	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL464_RS17420	SM00387	Histidine kinase-like ATPases
AL464_RS17420	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS17420	SM00448	cheY-homologous receiver domain
AL464_RS17455	SM00465	GIY-YIG type nucleases (URI domain)
AL464_RS17465	SM00387	Histidine kinase-like ATPases
AL464_RS17465	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS17465	SM00448	cheY-homologous receiver domain
AL464_RS17470	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_RS17495	SM00344	helix_turn_helix ASNC type
AL464_RS17545	SM00822	AL464_RS17545
AL464_RS17580	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_RS17595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS17595	SM00387	Histidine kinase-like ATPases
AL464_RS17600	SM00421	helix_turn_helix, Lux Regulon
AL464_RS17600	SM00448	cheY-homologous receiver domain
AL464_RS17635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS17680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS17685	SM00861	Transketolase, pyrimidine binding domain
AL464_RS17710	SM00636	AL464_RS17710
AL464_RS17715	SM00052	Putative diguanylate phosphodiesterase
AL464_RS17715	SM00267	diguanylate cyclase
AL464_RS17720	SM00450	Rhodanese Homology Domain
AL464_RS17745	SM00852	Probable molybdopterin binding domain
AL464_RS17785	SM00448	cheY-homologous receiver domain
AL464_RS17790	SM00091	PAS domain
AL464_RS17800	SM01240	AL464_RS17800
AL464_RS17810	SM00893	Electron transfer flavoprotein domain
AL464_RS17815	SM00893	Electron transfer flavoprotein domain
AL464_RS17830	SM00382	ATPases associated with a variety of cellular activities
AL464_RS17855	SM00382	ATPases associated with a variety of cellular activities
AL464_RS17885	SM00422	helix_turn_helix, mercury resistance
AL464_RS17915	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS17920	SM01266	AL464_RS17920
AL464_RS17945	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_RS17945	SM00091	PAS domain
AL464_RS17945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS17945	SM00387	Histidine kinase-like ATPases
AL464_RS17945	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS17945	SM00448	cheY-homologous receiver domain
AL464_RS17955	SM00878	Biotin carboxylase C-terminal domain
AL464_RS17975	SM00422	helix_turn_helix, mercury resistance
AL464_RS18010	SM00822	AL464_RS18010
AL464_RS18020	SM00028	Tetratricopeptide repeats
AL464_RS18020	SM00267	diguanylate cyclase
AL464_RS18050	SM00382	ATPases associated with a variety of cellular activities
AL464_RS18065	SM00244	prohibitin homologues
AL464_RS18075	SM00052	Putative diguanylate phosphodiesterase
AL464_RS18075	SM00091	PAS domain
AL464_RS18075	SM00267	diguanylate cyclase
AL464_RS18095	SM00387	Histidine kinase-like ATPases
AL464_RS18095	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS18095	SM00448	cheY-homologous receiver domain
AL464_RS18160	SM00052	Putative diguanylate phosphodiesterase
AL464_RS18160	SM00267	diguanylate cyclase
AL464_RS18170	SM00382	ATPases associated with a variety of cellular activities
AL464_RS18190	SM00354	helix_turn _helix lactose operon repressor
AL464_RS18225	SM00448	cheY-homologous receiver domain
AL464_RS18225	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS18230	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS18235	SM00871	Bacterial transcription activator, effector binding domain
AL464_RS18240	SM00098	Alkaline phosphatase homologues
AL464_RS18260	SM00028	Tetratricopeptide repeats
AL464_RS18260	SM00267	diguanylate cyclase
AL464_RS18280	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_RS18305	SM01012	AL464_RS18305
AL464_RS18325	SM00382	ATPases associated with a variety of cellular activities
AL464_RS18360	SM00331	Sigma factor PP2C-like phosphatases
AL464_RS18360	SM00448	cheY-homologous receiver domain
AL464_RS18380	SM00448	cheY-homologous receiver domain
AL464_RS18385	SM00220	Serine/Threonine protein kinases, catalytic domain
AL464_RS18395	SM00240	Forkhead associated domain
AL464_RS18425	SM00331	Sigma factor PP2C-like phosphatases
AL464_RS18425	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AL464_RS18470	SM00382	ATPases associated with a variety of cellular activities
AL464_RS18470	SM01086	C-terminal, D2-small domain, of ClpB protein
AL464_RS18525	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS18565	SM00382	ATPases associated with a variety of cellular activities
AL464_RS18615	SM01005	Alanine racemase, C-terminal domain
AL464_RS18620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS18620	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS18635	SM00642	Alpha-amylase domain
AL464_RS18650	SM00880	AL464_RS18650
AL464_RS18785	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS18830	SM00387	Histidine kinase-like ATPases
AL464_RS18835	SM00421	helix_turn_helix, Lux Regulon
AL464_RS18835	SM00448	cheY-homologous receiver domain
AL464_RS18865	SM00450	Rhodanese Homology Domain
AL464_RS18875	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_RS18925	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS18965	SM00382	ATPases associated with a variety of cellular activities
AL464_RS18975	SM00267	diguanylate cyclase
AL464_RS18975	SM00448	cheY-homologous receiver domain
AL464_RS18985	SM00267	diguanylate cyclase
AL464_RS19000	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL464_RS19000	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL464_RS19010	SM00387	Histidine kinase-like ATPases
AL464_RS19010	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS19015	SM00448	cheY-homologous receiver domain
AL464_RS19015	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS19085	SM00881	CoA binding domain
AL464_RS19110	SM00091	PAS domain
AL464_RS19110	SM00267	diguanylate cyclase
AL464_RS19110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS19120	SM00796	Allophanate hydrolase subunit 1
AL464_RS19125	SM00797	Allophanate hydrolase subunit 2
AL464_RS19140	SM00382	ATPases associated with a variety of cellular activities
AL464_RS19155	SM00052	Putative diguanylate phosphodiesterase
AL464_RS19155	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL464_RS19155	SM00267	diguanylate cyclase
AL464_RS19165	SM00271	DnaJ molecular chaperone homology domain
AL464_RS19225	SM00782	PhnA Zinc-Ribbon
AL464_RS19260	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS19265	SM00867	YceI-like domain 
AL464_RS19285	SM00052	Putative diguanylate phosphodiesterase
AL464_RS19290	SM00487	DEAD-like helicases superfamily
AL464_RS19290	SM00490	helicase superfamily c-terminal domain
AL464_RS19305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS19325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL464_RS19360	SM00495	Chitin-binding domain type 3
AL464_RS19360	SM00636	AL464_RS19360
AL464_RS19370	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS19385	SM00448	cheY-homologous receiver domain
AL464_RS19390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS19390	SM00387	Histidine kinase-like ATPases
AL464_RS19390	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS19410	SM00382	ATPases associated with a variety of cellular activities
AL464_RS19420	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS19420	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL464_RS19430	SM00052	Putative diguanylate phosphodiesterase
AL464_RS19450	SM00354	helix_turn _helix lactose operon repressor
AL464_RS19500	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_RS19690	SM00479	AL464_RS19690
AL464_RS19700	SM00382	ATPases associated with a variety of cellular activities
AL464_RS19735	SM00422	helix_turn_helix, mercury resistance
AL464_RS19770	SM00924	MgtE intracellular N domain
AL464_RS19810	SM00953	AL464_RS19810
AL464_RS19830	SM00704	CDGSH-type zinc finger. Function unknown.
AL464_RS19840	SM00448	cheY-homologous receiver domain
AL464_RS19845	SM00387	Histidine kinase-like ATPases
AL464_RS19895	SM00014	Acid phosphatase homologues
AL464_RS19930	SM00260	Two component signalling adaptor domain
AL464_RS19930	SM00448	cheY-homologous receiver domain
AL464_RS19945	SM00448	cheY-homologous receiver domain
AL464_RS19955	SM00421	helix_turn_helix, Lux Regulon
AL464_RS19955	SM00448	cheY-homologous receiver domain
AL464_RS19965	SM00267	diguanylate cyclase
AL464_RS19970	SM00421	helix_turn_helix, Lux Regulon
AL464_RS19970	SM00448	cheY-homologous receiver domain
AL464_RS19975	SM00052	Putative diguanylate phosphodiesterase
AL464_RS19975	SM00448	cheY-homologous receiver domain
AL464_RS19980	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS19980	SM00387	Histidine kinase-like ATPases
AL464_RS19980	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS19980	SM00448	cheY-homologous receiver domain
AL464_RS20010	SM00327	von Willebrand factor (vWF) type A domain
AL464_RS20080	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS20095	SM00052	Putative diguanylate phosphodiesterase
AL464_RS20110	SM00387	Histidine kinase-like ATPases
AL464_RS20110	SM00448	cheY-homologous receiver domain
AL464_RS20160	SM00990	AL464_RS20160
AL464_RS20165	SM00028	Tetratricopeptide repeats
AL464_RS20195	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL464_RS20215	SM00327	von Willebrand factor (vWF) type A domain
AL464_RS20220	SM00327	von Willebrand factor (vWF) type A domain
AL464_RS20255	SM00028	Tetratricopeptide repeats
AL464_RS20270	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS20285	SM00073	Histidine Phosphotransfer domain
AL464_RS20285	SM00387	Histidine kinase-like ATPases
AL464_RS20285	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS20285	SM00448	cheY-homologous receiver domain
AL464_RS20295	SM00851	MGS-like domain
AL464_RS20345	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS20355	SM00422	helix_turn_helix, mercury resistance
AL464_RS20360	SM00382	ATPases associated with a variety of cellular activities
AL464_RS20425	SM00861	Transketolase, pyrimidine binding domain
AL464_RS20470	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS20470	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL464_RS20475	SM00382	ATPases associated with a variety of cellular activities
AL464_RS20515	SM00822	AL464_RS20515
AL464_RS20550	SM00422	helix_turn_helix, mercury resistance
AL464_RS20585	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_RS20585	SM00091	PAS domain
AL464_RS20585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS20600	SM00052	Putative diguanylate phosphodiesterase
AL464_RS20600	SM00267	diguanylate cyclase
AL464_RS20605	SM00487	DEAD-like helicases superfamily
AL464_RS20605	SM00490	helicase superfamily c-terminal domain
AL464_RS20610	SM00357	Cold shock protein domain
AL464_RS20610	SM00955	AL464_RS20610
AL464_RS20615	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS20670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS20675	SM00382	ATPases associated with a variety of cellular activities
AL464_RS20680	SM00052	Putative diguanylate phosphodiesterase
AL464_RS20700	SM00487	DEAD-like helicases superfamily
AL464_RS20700	SM00490	helicase superfamily c-terminal domain
AL464_RS20705	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AL464_RS20735	SM00487	DEAD-like helicases superfamily
AL464_RS20735	SM00490	helicase superfamily c-terminal domain
AL464_RS20845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS20845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS20855	SM00382	ATPases associated with a variety of cellular activities
AL464_RS20875	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS20875	SM00267	diguanylate cyclase
AL464_RS20885	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_RS20885	SM00091	PAS domain
AL464_RS20885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS20895	SM00357	Cold shock protein domain
AL464_RS20900	SM01322	AL464_RS20900
AL464_RS21060	SM00052	Putative diguanylate phosphodiesterase
AL464_RS21060	SM00267	diguanylate cyclase
AL464_RS21095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS21095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS21115	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_RS21125	SM00481	DNA polymerase alpha chain like domain
AL464_RS21165	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_RS21175	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS21200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS21200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS21210	SM00382	ATPases associated with a variety of cellular activities
AL464_RS21230	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL464_RS21275	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL464_RS21275	SM00267	diguanylate cyclase
AL464_RS21320	SM00382	ATPases associated with a variety of cellular activities
AL464_RS21345	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL464_RS21350	SM00642	Alpha-amylase domain
AL464_RS21430	SM00260	Two component signalling adaptor domain
AL464_RS21430	SM00448	cheY-homologous receiver domain
AL464_RS21450	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL464_RS21480	SM00382	ATPases associated with a variety of cellular activities
AL464_RS21570	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS21590	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS21590	SM00871	Bacterial transcription activator, effector binding domain
AL464_RS21640	SM00487	DEAD-like helicases superfamily
AL464_RS21640	SM00490	helicase superfamily c-terminal domain
AL464_RS21670	SM00829	Enoylreductase
AL464_RS21685	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS21720	SM00788	Adenylosuccinate synthetase
AL464_RS21725	SM00870	AL464_RS21725
AL464_RS21750	SM00421	helix_turn_helix, Lux Regulon
AL464_RS21795	SM00267	diguanylate cyclase
AL464_RS21800	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_RS21805	SM00421	helix_turn_helix, Lux Regulon
AL464_RS21820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS21820	SM00866	AL464_RS21820
AL464_RS21845	SM00382	ATPases associated with a variety of cellular activities
AL464_RS21880	SM00155	Phospholipase D. Active site motifs.
AL464_RS21890	SM01022	AL464_RS21890
AL464_RS21900	SM00028	Tetratricopeptide repeats
AL464_RS21910	SM00422	helix_turn_helix, mercury resistance
AL464_RS21940	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL464_RS21950	SM00838	Elongation factor G C-terminus
AL464_RS21950	SM00889	Elongation factor G, domain IV
AL464_RS22055	SM00248	ankyrin repeats
AL464_RS22060	SM01060	AL464_RS22060
AL464_RS22070	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL464_RS22070	SM01134	AL464_RS22070
AL464_RS22180	SM00883	Chaperonin 10 Kd subunit
AL464_RS22190	SM00450	Rhodanese Homology Domain
AL464_RS22215	SM01240	AL464_RS22215
AL464_RS22290	SM00858	AL464_RS22290
AL464_RS22375	SM00631	AL464_RS22375
AL464_RS22405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS22405	SM00866	AL464_RS22405
AL464_RS22415	SM00382	ATPases associated with a variety of cellular activities
AL464_RS22445	SM00354	helix_turn _helix lactose operon repressor
AL464_RS22485	SM00382	ATPases associated with a variety of cellular activities
AL464_RS22500	SM01057	Eukaryotic-type carbonic anhydrase
AL464_RS22560	SM01266	AL464_RS22560
AL464_RS22625	SM00267	diguanylate cyclase
AL464_RS22635	SM00530	Helix-turn-helix XRE-family like proteins 
AL464_RS22640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS22645	SM00267	diguanylate cyclase
AL464_RS22645	SM01079	AL464_RS22645
AL464_RS22720	SM00267	diguanylate cyclase
AL464_RS22725	SM00382	ATPases associated with a variety of cellular activities
AL464_RS22725	SM00448	cheY-homologous receiver domain
AL464_RS22730	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL464_RS22730	SM00387	Histidine kinase-like ATPases
AL464_RS22755	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS22785	SM00849	Metallo-beta-lactamase superfamily
AL464_RS22825	SM00382	ATPases associated with a variety of cellular activities
AL464_RS22860	SM00028	Tetratricopeptide repeats
AL464_RS22895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS22895	SM00387	Histidine kinase-like ATPases
AL464_RS22895	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS22900	SM00448	cheY-homologous receiver domain
AL464_RS22900	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS23005	SM00382	ATPases associated with a variety of cellular activities
AL464_RS23035	SM00014	Acid phosphatase homologues
AL464_RS23055	SM00822	AL464_RS23055
AL464_RS23090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS23165	SM00506	Appr-1"-p processing enzyme
AL464_RS23220	SM00495	Chitin-binding domain type 3
AL464_RS23225	SM00344	helix_turn_helix ASNC type
AL464_RS23300	SM00346	helix_turn_helix isocitrate lyase regulation
AL464_RS23305	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL464_RS23310	SM00479	AL464_RS23310
AL464_RS23325	SM00829	Enoylreductase
AL464_RS23340	SM00267	diguanylate cyclase
AL464_RS23360	SM00849	Metallo-beta-lactamase superfamily
AL464_RS23385	SM00267	diguanylate cyclase
AL464_RS23405	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL464_RS23405	SM00495	Chitin-binding domain type 3
AL464_RS23405	SM00636	AL464_RS23405
AL464_RS23450	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS23450	SM01009	AlkA N-terminal domain
AL464_RS23510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL464_RS23515	SM00382	ATPases associated with a variety of cellular activities
AL464_RS23555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS23555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS23555	SM01049	AL464_RS23555
AL464_RS23570	SM00448	cheY-homologous receiver domain
AL464_RS23570	SM00850	LytTr DNA-binding domain
AL464_RS23575	SM00387	Histidine kinase-like ATPases
AL464_RS23625	SM00387	Histidine kinase-like ATPases
AL464_RS23625	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS23625	SM00448	cheY-homologous receiver domain
AL464_RS23650	SM00382	ATPases associated with a variety of cellular activities
AL464_RS23655	SM00382	ATPases associated with a variety of cellular activities
AL464_RS23680	SM00470	ParB-like nuclease domain
AL464_RS23755	SM00382	ATPases associated with a variety of cellular activities
AL464_RS23760	SM00052	Putative diguanylate phosphodiesterase
AL464_RS23760	SM00267	diguanylate cyclase
AL464_RS23775	SM00448	cheY-homologous receiver domain
AL464_RS23780	SM00387	Histidine kinase-like ATPases
AL464_RS23780	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS23790	SM00421	helix_turn_helix, Lux Regulon
AL464_RS23800	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS23825	SM00360	RNA recognition motif
AL464_RS23850	SM00344	helix_turn_helix ASNC type
AL464_RS23860	SM00382	ATPases associated with a variety of cellular activities
AL464_RS23870	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS23890	SM00487	DEAD-like helicases superfamily
AL464_RS23890	SM00490	helicase superfamily c-terminal domain
AL464_RS23900	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS23905	SM00829	Enoylreductase
AL464_RS23920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS23980	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL464_RS24000	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS24015	SM01007	Class II Aldolase and Adducin N-terminal domain
AL464_RS24030	SM00382	ATPases associated with a variety of cellular activities
AL464_RS24060	SM00448	cheY-homologous receiver domain
AL464_RS24060	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS24065	SM00387	Histidine kinase-like ATPases
AL464_RS24125	SM00382	ATPases associated with a variety of cellular activities
AL464_RS24130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS24130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS24160	SM00857	Resolvase, N terminal domain
AL464_RS24165	SM00642	Alpha-amylase domain
AL464_RS24185	SM00642	Alpha-amylase domain
AL464_RS24200	SM00642	Alpha-amylase domain
AL464_RS24205	SM00671	Sel1-like repeats.
AL464_RS24225	SM00966	SpoVT / AbrB like domain 
AL464_RS24275	SM00421	helix_turn_helix, Lux Regulon
AL464_RS24300	SM00642	Alpha-amylase domain
AL464_RS24310	SM00642	Alpha-amylase domain
AL464_RS24375	SM00226	Low molecular weight phosphatase family
AL464_RS24405	SM00450	Rhodanese Homology Domain
AL464_RS24420	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL464_RS24425	SM00642	Alpha-amylase domain
AL464_RS24430	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS24675	SM00382	ATPases associated with a variety of cellular activities
AL464_RS24700	SM00382	ATPases associated with a variety of cellular activities
AL464_RS24710	SM00020	Trypsin-like serine protease
AL464_RS24730	SM00481	DNA polymerase alpha chain like domain
AL464_RS24785	SM00448	cheY-homologous receiver domain
AL464_RS24785	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS24790	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS24805	SM00062	Bacterial periplasmic substrate-binding proteins
AL464_RS24810	SM00052	Putative diguanylate phosphodiesterase
AL464_RS24810	SM00267	diguanylate cyclase
AL464_RS24820	SM00829	Enoylreductase
AL464_RS24830	SM00972	Spore Coat Protein U domain
AL464_RS24850	SM00972	Spore Coat Protein U domain
AL464_RS24855	SM01057	Eukaryotic-type carbonic anhydrase
AL464_RS24890	SM00382	ATPases associated with a variety of cellular activities
AL464_RS24905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS24905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS24925	SM00587	ZnF_C4 abd HLH domain containing kinases domain
AL464_RS24955	SM00382	ATPases associated with a variety of cellular activities
AL464_RS24975	SM00267	diguanylate cyclase
AL464_RS24980	SM00028	Tetratricopeptide repeats
AL464_RS25005	SM00422	helix_turn_helix, mercury resistance
AL464_RS25015	SM00257	Lysin motif
AL464_RS25025	SM00487	DEAD-like helicases superfamily
AL464_RS25025	SM00490	helicase superfamily c-terminal domain
AL464_RS25055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS25055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS25075	SM00382	ATPases associated with a variety of cellular activities
AL464_RS25080	SM00267	diguanylate cyclase
AL464_RS25095	SM00327	von Willebrand factor (vWF) type A domain
AL464_RS25120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL464_RS25120	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL464_RS25130	SM00421	helix_turn_helix, Lux Regulon
AL464_RS25135	SM00421	helix_turn_helix, Lux Regulon
AL464_RS25145	SM00382	ATPases associated with a variety of cellular activities
AL464_RS25185	SM00382	ATPases associated with a variety of cellular activities
AL464_RS25195	SM00382	ATPases associated with a variety of cellular activities
AL464_RS25200	SM00387	Histidine kinase-like ATPases
AL464_RS25200	SM00388	His Kinase A (phosphoacceptor) domain
AL464_RS25205	SM00448	cheY-homologous receiver domain
AL464_RS25205	SM00862	Transcriptional regulatory protein, C terminal
AL464_RS25220	SM00052	Putative diguanylate phosphodiesterase
AL464_RS25250	SM00342	helix_turn_helix, arabinose operon control protein
AL464_RS25275	SM01060	AL464_RS25275
AL464_RS25285	SM00829	Enoylreductase
AL464_RS25295	SM01022	AL464_RS25295
AL464_RS25355	SM00382	ATPases associated with a variety of cellular activities
AL464_RS25395	SM00052	Putative diguanylate phosphodiesterase
AL464_RS25425	SM00246	Wiskott Aldrich syndrome homology region 2
