locus-tag class description H9K48_RS00005 PF00308 Bacterial dnaA protein H9K48_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix H9K48_RS00005 PF11638 DnaA N-terminal domain H9K48_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H9K48_RS00010 PF02767 DNA polymerase III beta subunit, central domain H9K48_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H9K48_RS00015 PF02463 RecF/RecN/SMC N terminal domain H9K48_RS00020 PF01751 Toprim domain H9K48_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS00020 PF18053 DNA gyrase B subunit insert domain H9K48_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus H9K48_RS00020 PF00204 DNA gyrase B H9K48_RS00030 PF00011 Hsp20/alpha crystallin family H9K48_RS00035 PF00155 Aminotransferase class I and II H9K48_RS00040 PF00128 Alpha amylase, catalytic domain H9K48_RS00045 PF05746 DALR anticodon binding domain H9K48_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit H9K48_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit H9K48_RS00055 PF01169 Uncharacterized protein family UPF0016 H9K48_RS00065 PF01206 Sulfurtransferase TusA H9K48_RS00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS00075 PF03466 LysR substrate binding domain H9K48_RS00080 PF08240 Alcohol dehydrogenase GroES-like domain H9K48_RS00080 PF00107 Zinc-binding dehydrogenase H9K48_RS00085 PF02803 Thiolase, C-terminal domain H9K48_RS00085 PF00108 Thiolase, N-terminal domain H9K48_RS00090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9K48_RS00090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9K48_RS00090 PF00378 Enoyl-CoA hydratase/isomerase H9K48_RS00095 PF09186 Domain of unknown function (DUF1949) H9K48_RS00095 PF01205 Uncharacterized protein family UPF0029 H9K48_RS00100 PF02386 Cation transport protein H9K48_RS00105 PF12724 Flavodoxin domain H9K48_RS00150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H9K48_RS00155 PF01964 Radical SAM ThiC family H9K48_RS00155 PF13667 ThiC-associated domain H9K48_RS00160 PF02581 Thiamine monophosphate synthase H9K48_RS00165 PF00899 ThiF family H9K48_RS00170 PF02597 ThiS family H9K48_RS00175 PF05690 Thiazole biosynthesis protein ThiG H9K48_RS00180 PF04055 Radical SAM superfamily H9K48_RS00180 PF06968 Biotin and Thiamin Synthesis associated domain H9K48_RS00185 PF01321 Creatinase/Prolidase N-terminal domain H9K48_RS00185 PF00557 Metallopeptidase family M24 H9K48_RS00185 PF01321 Creatinase/Prolidase N-terminal domain H9K48_RS00185 PF00557 Metallopeptidase family M24 H9K48_RS00190 PF03466 LysR substrate binding domain H9K48_RS00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS00195 PF07690 Major Facilitator Superfamily H9K48_RS00215 PF05114 Protein of unknown function (DUF692) H9K48_RS00225 PF00580 UvrD/REP helicase N-terminal domain H9K48_RS00225 PF13361 UvrD-like helicase C-terminal domain H9K48_RS00235 PF01810 LysE type translocator H9K48_RS00245 PF00892 EamA-like transporter family H9K48_RS00250 PF00570 HRDC domain H9K48_RS00250 PF16124 RecQ zinc-binding H9K48_RS00250 PF09382 RQC domain H9K48_RS00250 PF00270 DEAD/DEAH box helicase H9K48_RS00250 PF00271 Helicase conserved C-terminal domain H9K48_RS00260 PF02592 Putative vitamin uptake transporter H9K48_RS00265 PF02541 Ppx/GppA phosphatase family H9K48_RS00270 PF00270 DEAD/DEAH box helicase H9K48_RS00270 PF00271 Helicase conserved C-terminal domain H9K48_RS00275 PF00085 Thioredoxin H9K48_RS00280 PF07497 Rho termination factor, RNA-binding domain H9K48_RS00280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K48_RS00280 PF07498 Rho termination factor, N-terminal domain H9K48_RS00290 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H9K48_RS00295 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K48_RS00300 PF00175 Oxidoreductase NAD-binding domain H9K48_RS00340 PF07219 HemY protein N-terminus H9K48_RS00345 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase H9K48_RS00350 PF02602 Uroporphyrinogen-III synthase HemD H9K48_RS00355 PF03900 Porphobilinogen deaminase, C-terminal domain H9K48_RS00355 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H9K48_RS00360 PF12633 Adenylate cyclase NT domain H9K48_RS00360 PF01295 Adenylate cyclase, class-I H9K48_RS00365 PF01491 Frataxin-like domain H9K48_RS00375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K48_RS00375 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K48_RS00380 PF01678 Diaminopimelate epimerase H9K48_RS00390 PF00589 Phage integrase family H9K48_RS00390 PF02899 Phage integrase, N-terminal SAM-like domain H9K48_RS00395 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS00400 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS00400 PF08495 FIST N domain H9K48_RS00400 PF10442 FIST C domain H9K48_RS00400 PF00563 EAL domain H9K48_RS00405 PF03942 DTW domain H9K48_RS00425 PF12146 Serine aminopeptidase, S33 H9K48_RS00430 PF01810 LysE type translocator H9K48_RS00435 PF00563 EAL domain H9K48_RS00435 PF08668 HDOD domain H9K48_RS00440 PF01022 Bacterial regulatory protein, arsR family H9K48_RS00445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K48_RS00445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K48_RS00495 PF01914 MarC family integral membrane protein H9K48_RS00510 PF00448 SRP54-type protein, GTPase domain H9K48_RS00510 PF02881 SRP54-type protein, helical bundle domain H9K48_RS00515 PF00005 ABC transporter H9K48_RS00520 PF18075 FtsX extracellular domain H9K48_RS00525 PF04545 Sigma-70, region 4 H9K48_RS00525 PF04542 Sigma-70 region 2 H9K48_RS00525 PF00140 Sigma-70 factor, region 1.2 H9K48_RS00530 PF00581 Rhodanese-like domain H9K48_RS00535 PF01694 Rhomboid family H9K48_RS00535 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease H9K48_RS00540 PF03748 Flagellar basal body-associated protein FliL H9K48_RS00545 PF04345 Chorismate lyase H9K48_RS00550 PF01040 UbiA prenyltransferase family H9K48_RS00555 PF01553 Acyltransferase H9K48_RS00560 PF01726 LexA DNA binding domain H9K48_RS00560 PF00717 Peptidase S24-like H9K48_RS00565 PF04072 Leucine carboxyl methyltransferase H9K48_RS00570 PF01554 MatE H9K48_RS00575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K48_RS00575 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS00580 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS00590 PF05958 tRNA (Uracil-5-)-methyltransferase H9K48_RS00595 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS00595 PF00593 TonB dependent receptor H9K48_RS00605 PF01177 Asp/Glu/Hydantoin racemase H9K48_RS00660 PF13091 PLD-like domain H9K48_RS00670 PF01565 FAD binding domain H9K48_RS00670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H9K48_RS00675 PF08279 HTH domain H9K48_RS00675 PF02237 Biotin protein ligase C terminal domain H9K48_RS00675 PF03099 Biotin/lipoate A/B protein ligase family H9K48_RS00680 PF00485 Phosphoribulokinase / Uridine kinase family H9K48_RS00705 PF03143 Elongation factor Tu C-terminal domain H9K48_RS00705 PF03144 Elongation factor Tu domain 2 H9K48_RS00705 PF00009 Elongation factor Tu GTP binding domain H9K48_RS00710 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H9K48_RS00715 PF02357 Transcription termination factor nusG H9K48_RS00715 PF00467 KOW motif H9K48_RS00720 PF03946 Ribosomal protein L11, N-terminal domain H9K48_RS00720 PF00298 Ribosomal protein L11, RNA binding domain H9K48_RS00725 PF00687 Ribosomal protein L1p/L10e family H9K48_RS00730 PF00466 Ribosomal protein L10 H9K48_RS00735 PF00542 Ribosomal protein L7/L12 C-terminal domain H9K48_RS00735 PF16320 Ribosomal protein L7/L12 dimerisation domain H9K48_RS00740 PF04563 RNA polymerase beta subunit H9K48_RS00740 PF04561 RNA polymerase Rpb2, domain 2 H9K48_RS00740 PF04565 RNA polymerase Rpb2, domain 3 H9K48_RS00740 PF10385 RNA polymerase beta subunit external 1 domain H9K48_RS00740 PF00562 RNA polymerase Rpb2, domain 6 H9K48_RS00740 PF04560 RNA polymerase Rpb2, domain 7 H9K48_RS00745 PF04998 RNA polymerase Rpb1, domain 5 H9K48_RS00745 PF05000 RNA polymerase Rpb1, domain 4 H9K48_RS00745 PF00623 RNA polymerase Rpb1, domain 2 H9K48_RS00745 PF04997 RNA polymerase Rpb1, domain 1 H9K48_RS00745 PF04983 RNA polymerase Rpb1, domain 3 H9K48_RS00750 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ H9K48_RS00755 PF00293 NUDIX domain H9K48_RS00755 PF09297 NADH pyrophosphatase zinc ribbon domain H9K48_RS00770 PF01208 Uroporphyrinogen decarboxylase (URO-D) H9K48_RS00775 PF03167 Uracil DNA glycosylase superfamily H9K48_RS00780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K48_RS00785 PF04222 Protein of unknown function (DUF416) H9K48_RS00790 PF01595 Cyclin M transmembrane N-terminal domain H9K48_RS00790 PF00571 CBS domain H9K48_RS00795 PF00216 Bacterial DNA-binding protein H9K48_RS00805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H9K48_RS00805 PF02843 Phosphoribosylglycinamide synthetase, C domain H9K48_RS00805 PF02844 Phosphoribosylglycinamide synthetase, N domain H9K48_RS00810 PF02142 MGS-like domain H9K48_RS00810 PF01808 AICARFT/IMPCHase bienzyme H9K48_RS00815 PF13411 MerR HTH family regulatory protein H9K48_RS00820 PF18500 CadC C-terminal domain 1 H9K48_RS00820 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS00825 PF13520 Amino acid permease H9K48_RS00830 PF01276 Orn/Lys/Arg decarboxylase, major domain H9K48_RS00830 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9K48_RS00830 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9K48_RS00900 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS00900 PF05230 MASE2 domain H9K48_RS00905 PF12848 ABC transporter H9K48_RS00905 PF00005 ABC transporter H9K48_RS00910 PF07690 Major Facilitator Superfamily H9K48_RS00915 PF02954 Bacterial regulatory protein, Fis family H9K48_RS00920 PF01207 Dihydrouridine synthase (Dus) H9K48_RS00930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K48_RS00930 PF00289 Biotin carboxylase, N-terminal domain H9K48_RS00930 PF02785 Biotin carboxylase C-terminal domain H9K48_RS00935 PF00364 Biotin-requiring enzyme H9K48_RS00940 PF01220 Dehydroquinase class II H9K48_RS00945 PF13193 AMP-binding enzyme C-terminal domain H9K48_RS00945 PF00501 AMP-binding enzyme H9K48_RS00945 PF16177 Acetyl-coenzyme A synthetase N-terminus H9K48_RS00960 PF12832 MFS_1 like family H9K48_RS00965 PF00072 Response regulator receiver domain H9K48_RS00965 PF01627 Hpt domain H9K48_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS00965 PF00672 HAMP domain H9K48_RS00965 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS00970 PF10415 Fumarase C C-terminus H9K48_RS00970 PF00206 Lyase H9K48_RS00985 PF00474 Sodium:solute symporter family H9K48_RS00995 PF03471 Transporter associated domain H9K48_RS00995 PF00999 Sodium/hydrogen exchanger family H9K48_RS00995 PF02080 TrkA-C domain H9K48_RS01000 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS01000 PF00072 Response regulator receiver domain H9K48_RS01005 PF02683 Cytochrome C biogenesis protein transmembrane region H9K48_RS01005 PF11412 Disulphide bond corrector protein DsbC H9K48_RS01010 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9K48_RS01015 PF10415 Fumarase C C-terminus H9K48_RS01015 PF00206 Lyase H9K48_RS01020 PF04186 FxsA cytoplasmic membrane protein H9K48_RS01025 PF00588 SpoU rRNA Methylase family H9K48_RS01030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9K48_RS01030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9K48_RS01035 PF16527 Two-component sensor protein CpxA, periplasmic domain H9K48_RS01035 PF00672 HAMP domain H9K48_RS01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS01035 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS01040 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS01040 PF00072 Response regulator receiver domain H9K48_RS01045 PF07813 LTXXQ motif family protein H9K48_RS01050 PF01545 Cation efflux family H9K48_RS01050 PF16916 Dimerisation domain of Zinc Transporter H9K48_RS01055 PF00365 Phosphofructokinase H9K48_RS01060 PF01554 MatE H9K48_RS01065 PF00166 Chaperonin 10 Kd subunit H9K48_RS01070 PF00118 TCP-1/cpn60 chaperonin family H9K48_RS01080 PF02308 MgtC family H9K48_RS01085 PF00842 Alanine racemase, C-terminal domain H9K48_RS01085 PF01168 Alanine racemase, N-terminal domain H9K48_RS01090 PF04055 Radical SAM superfamily H9K48_RS01095 PF08207 Elongation factor P (EF-P) KOW-like domain H9K48_RS01095 PF01132 Elongation factor P (EF-P) OB domain H9K48_RS01095 PF09285 Elongation factor P, C-terminal H9K48_RS01105 PF02313 Fumarate reductase subunit D H9K48_RS01110 PF02300 Fumarate reductase subunit C H9K48_RS01115 PF13085 2Fe-2S iron-sulfur cluster binding domain H9K48_RS01115 PF13183 4Fe-4S dicluster domain H9K48_RS01120 PF00890 FAD binding domain H9K48_RS01120 PF02910 Fumarate reductase flavoprotein C-term H9K48_RS01125 PF00152 tRNA synthetases class II (D, K and N) H9K48_RS01135 PF08360 QacR-like protein, C-terminal region H9K48_RS01135 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS01145 PF01551 Peptidase family M23 H9K48_RS01150 PF00132 Bacterial transferase hexapeptide (six repeats) H9K48_RS01150 PF06426 Serine acetyltransferase, N-terminal H9K48_RS01155 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H9K48_RS01155 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H9K48_RS01160 PF02556 Preprotein translocase subunit SecB H9K48_RS01165 PF00581 Rhodanese-like domain H9K48_RS01170 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H9K48_RS01170 PF01676 Metalloenzyme superfamily H9K48_RS01180 PF00672 HAMP domain H9K48_RS01180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS01185 PF00939 Sodium:sulfate symporter transmembrane region H9K48_RS01190 PF02666 Phosphatidylserine decarboxylase H9K48_RS01195 PF03193 RsgA GTPase H9K48_RS01200 PF00929 Exonuclease H9K48_RS01270 PF08331 Domain of unknown function (DUF1730) H9K48_RS01275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H9K48_RS01280 PF01520 N-acetylmuramoyl-L-alanine amidase H9K48_RS01285 PF01119 DNA mismatch repair protein, C-terminal domain H9K48_RS01285 PF08676 MutL C terminal dimerisation domain H9K48_RS01295 PF17209 Hfq protein H9K48_RS01300 PF13167 GTP-binding GTPase N-terminal H9K48_RS01300 PF01926 50S ribosome-binding GTPase H9K48_RS01300 PF16360 GTP-binding GTPase Middle Region H9K48_RS01305 PF01145 SPFH domain / Band 7 family H9K48_RS01305 PF12221 Bacterial membrane protein N terminal H9K48_RS01310 PF01145 SPFH domain / Band 7 family H9K48_RS01315 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) H9K48_RS01320 PF00709 Adenylosuccinate synthetase H9K48_RS01325 PF08238 Sel1 repeat H9K48_RS01330 PF00042 Globin H9K48_RS01330 PF00970 Oxidoreductase FAD-binding domain H9K48_RS01330 PF00175 Oxidoreductase NAD-binding domain H9K48_RS01335 PF02082 Transcriptional regulator H9K48_RS01340 PF17876 Cold shock domain H9K48_RS01340 PF00575 S1 RNA binding domain H9K48_RS01340 PF00773 RNB domain H9K48_RS01340 PF08206 Ribonuclease B OB domain H9K48_RS01340 PF08461 Ribonuclease R winged-helix domain H9K48_RS01345 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9K48_RS01345 PF00588 SpoU rRNA Methylase family H9K48_RS01350 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS01355 PF00579 tRNA synthetases class I (W and Y) H9K48_RS01370 PF00117 Glutamine amidotransferase class-I H9K48_RS01375 PF00202 Aminotransferase class-III H9K48_RS01380 PF04958 Arginine N-succinyltransferase beta subunit H9K48_RS01385 PF00171 Aldehyde dehydrogenase family H9K48_RS01395 PF00027 Cyclic nucleotide-binding domain H9K48_RS01395 PF13545 Crp-like helix-turn-helix domain H9K48_RS01400 PF00485 Phosphoribulokinase / Uridine kinase family H9K48_RS01405 PF06794 Uncharacterised protein family (UPF0270) H9K48_RS01410 PF00561 alpha/beta hydrolase fold H9K48_RS01420 PF12848 ABC transporter H9K48_RS01420 PF00005 ABC transporter H9K48_RS01425 PF02525 Flavodoxin-like fold H9K48_RS01430 PF02254 TrkA-N domain H9K48_RS01430 PF00999 Sodium/hydrogen exchanger family H9K48_RS01440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K48_RS01445 PF01112 Asparaginase H9K48_RS01450 PF04102 SlyX H9K48_RS01460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K48_RS01460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K48_RS01465 PF08348 YheO-like PAS domain H9K48_RS01465 PF13309 HTH domain H9K48_RS01470 PF02635 DsrE/DsrF-like family H9K48_RS01475 PF02635 DsrE/DsrF-like family H9K48_RS01480 PF04077 DsrH like protein H9K48_RS01485 PF00164 Ribosomal protein S12/S23 H9K48_RS01490 PF00177 Ribosomal protein S7p/S5e H9K48_RS01495 PF00679 Elongation factor G C-terminus H9K48_RS01495 PF03764 Elongation factor G, domain IV H9K48_RS01495 PF00009 Elongation factor Tu GTP binding domain H9K48_RS01495 PF03144 Elongation factor Tu domain 2 H9K48_RS01495 PF14492 Elongation Factor G, domain II H9K48_RS01500 PF00009 Elongation factor Tu GTP binding domain H9K48_RS01500 PF03143 Elongation factor Tu C-terminal domain H9K48_RS01500 PF03144 Elongation factor Tu domain 2 H9K48_RS01505 PF04324 BFD-like [2Fe-2S] binding domain H9K48_RS01510 PF00210 Ferritin-like domain H9K48_RS01515 PF03949 Malic enzyme, NAD binding domain H9K48_RS01515 PF00390 Malic enzyme, N-terminal domain H9K48_RS01520 PF01340 Met Apo-repressor, MetJ H9K48_RS01525 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K48_RS01530 PF00696 Amino acid kinase family H9K48_RS01530 PF00742 Homoserine dehydrogenase H9K48_RS01530 PF03447 Homoserine dehydrogenase, NAD binding domain H9K48_RS01535 PF02219 Methylenetetrahydrofolate reductase H9K48_RS01545 PF00311 Phosphoenolpyruvate carboxylase H9K48_RS01550 PF07687 Peptidase dimerisation domain H9K48_RS01550 PF01546 Peptidase family M20/M25/M40 H9K48_RS01555 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K48_RS01555 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K48_RS01560 PF00696 Amino acid kinase family H9K48_RS01565 PF00764 Arginosuccinate synthase H9K48_RS01570 PF00583 Acetyltransferase (GNAT) family H9K48_RS01570 PF14698 Argininosuccinate lyase C-terminal H9K48_RS01570 PF00206 Lyase H9K48_RS01580 PF08534 Redoxin H9K48_RS01580 PF00462 Glutaredoxin H9K48_RS01585 PF03466 LysR substrate binding domain H9K48_RS01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS01590 PF17092 Penicillin-binding protein OB-like domain H9K48_RS01590 PF00912 Transglycosylase H9K48_RS01590 PF00905 Penicillin binding protein transpeptidase domain H9K48_RS01600 PF05137 Fimbrial assembly protein (PilN) H9K48_RS01610 PF04351 Pilus assembly protein, PilP H9K48_RS01615 PF11741 AMIN domain H9K48_RS01615 PF00263 Bacterial type II and III secretion system protein H9K48_RS01615 PF03958 Bacterial type II/III secretion system short domain H9K48_RS01615 PF07660 Secretin and TonB N terminus short domain H9K48_RS01620 PF01202 Shikimate kinase H9K48_RS01625 PF01761 3-dehydroquinate synthase H9K48_RS01635 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9K48_RS01640 PF00834 Ribulose-phosphate 3 epimerase family H9K48_RS01645 PF01250 Ribosomal protein S6 H9K48_RS01650 PF00436 Single-strand binding protein family H9K48_RS01655 PF01084 Ribosomal protein S18 H9K48_RS01660 PF03948 Ribosomal protein L9, C-terminal domain H9K48_RS01660 PF01281 Ribosomal protein L9, N-terminal domain H9K48_RS01670 PF03796 DnaB-like helicase C terminal domain H9K48_RS01670 PF00772 DnaB-like helicase N terminal domain H9K48_RS01675 PF01168 Alanine racemase, N-terminal domain H9K48_RS01675 PF00842 Alanine racemase, C-terminal domain H9K48_RS01685 PF01894 Uncharacterised protein family UPF0047 H9K48_RS01690 PF00342 Phosphoglucose isomerase H9K48_RS01700 PF01475 Ferric uptake regulator family H9K48_RS01705 PF01207 Dihydrouridine synthase (Dus) H9K48_RS01725 PF00667 FAD binding domain H9K48_RS01725 PF00258 Flavodoxin H9K48_RS01725 PF00175 Oxidoreductase NAD-binding domain H9K48_RS01730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9K48_RS01730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9K48_RS01735 PF01507 Phosphoadenosine phosphosulfate reductase family H9K48_RS01795 PF00999 Sodium/hydrogen exchanger family H9K48_RS01800 PF02310 B12 binding domain H9K48_RS01800 PF02607 B12 binding domain H9K48_RS01800 PF02965 Vitamin B12 dependent methionine synthase, activation domain H9K48_RS01800 PF00809 Pterin binding enzyme H9K48_RS01800 PF02574 Homocysteine S-methyltransferase H9K48_RS01805 PF01842 ACT domain H9K48_RS01805 PF00696 Amino acid kinase family H9K48_RS01810 PF00266 Aminotransferase class-V H9K48_RS01820 PF17760 UvrA interaction domain H9K48_RS01820 PF17755 UvrA DNA-binding domain H9K48_RS01820 PF00005 ABC transporter H9K48_RS01825 PF00483 Nucleotidyl transferase H9K48_RS01830 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS01835 PF00436 Single-strand binding protein family H9K48_RS01840 PF17157 Gammaproteobacterial periplasmic sensor domain H9K48_RS01840 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS01840 PF00563 EAL domain H9K48_RS01860 PF03958 Bacterial type II/III secretion system short domain H9K48_RS01860 PF11741 AMIN domain H9K48_RS01860 PF07660 Secretin and TonB N terminus short domain H9K48_RS01860 PF00263 Bacterial type II and III secretion system protein H9K48_RS01865 PF13401 AAA domain H9K48_RS01865 PF01471 Putative peptidoglycan binding domain H9K48_RS01875 PF00437 Type II/IV secretion system protein H9K48_RS01875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9K48_RS01880 PF00482 Type II secretion system (T2SS), protein F H9K48_RS01890 PF00114 Pilin (bacterial filament) H9K48_RS01890 PF07963 Prokaryotic N-terminal methylation motif H9K48_RS01930 PF04085 rod shape-determining protein MreC H9K48_RS01935 PF04093 rod shape-determining protein MreD H9K48_RS01940 PF02545 Maf-like protein H9K48_RS01945 PF10150 Ribonuclease E/G family H9K48_RS01945 PF00575 S1 RNA binding domain H9K48_RS01950 PF13502 AsmA-like C-terminal region H9K48_RS01950 PF13116 Protein of unknown function H9K48_RS01955 PF00795 Carbon-nitrogen hydrolase H9K48_RS01960 PF01523 Putative modulator of DNA gyrase H9K48_RS01965 PF13638 PIN domain H9K48_RS01965 PF02562 PhoH-like protein H9K48_RS01970 PF12137 RNA polymerase recycling family C-terminal H9K48_RS01970 PF18337 RapA N-terminal Tudor like domain H9K48_RS01970 PF00271 Helicase conserved C-terminal domain H9K48_RS01970 PF00176 SNF2 family N-terminal domain H9K48_RS01970 PF18339 RapA N-terminal Tudor like domain 1 H9K48_RS01980 PF00849 RNA pseudouridylate synthase H9K48_RS01985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K48_RS01985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K48_RS01990 PF04751 Protein of unknown function (DUF615) H9K48_RS01995 PF01523 Putative modulator of DNA gyrase H9K48_RS02000 PF01769 Divalent cation transporter H9K48_RS02000 PF03448 MgtE intracellular N domain H9K48_RS02000 PF00571 CBS domain H9K48_RS02005 PF00381 PTS HPr component phosphorylation site H9K48_RS02010 PF03668 P-loop ATPase protein family H9K48_RS02015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K48_RS02020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9K48_RS02025 PF00309 Sigma-54 factor, Activator interacting domain (AID) H9K48_RS02025 PF04963 Sigma-54 factor, core binding domain H9K48_RS02025 PF04552 Sigma-54, DNA binding domain H9K48_RS02030 PF00005 ABC transporter H9K48_RS02030 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9K48_RS02035 PF03968 OstA-like protein H9K48_RS02045 PF00571 CBS domain H9K48_RS02045 PF01380 SIS domain H9K48_RS02050 PF01699 Sodium/calcium exchanger protein H9K48_RS02055 PF00005 ABC transporter H9K48_RS02060 PF02405 Permease MlaE H9K48_RS02065 PF02470 MlaD protein H9K48_RS02070 PF05494 MlaC protein H9K48_RS02080 PF01722 BolA-like protein H9K48_RS02085 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9K48_RS02090 PF01553 Acyltransferase H9K48_RS02095 PF01042 Endoribonuclease L-PSP H9K48_RS02100 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain H9K48_RS02100 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain H9K48_RS02105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9K48_RS02105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9K48_RS02115 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9K48_RS02115 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9K48_RS02125 PF06877 Regulator of ribonuclease activity B H9K48_RS02135 PF00583 Acetyltransferase (GNAT) family H9K48_RS02145 PF08264 Anticodon-binding domain of tRNA H9K48_RS02145 PF00133 tRNA synthetases class I (I, L, M and V) H9K48_RS02145 PF10458 Valyl tRNA synthetase tRNA binding arm H9K48_RS02150 PF04364 DNA polymerase III chi subunit, HolC H9K48_RS02155 PF00883 Cytosol aminopeptidase family, catalytic domain H9K48_RS02155 PF02789 Cytosol aminopeptidase family, N-terminal domain H9K48_RS02160 PF03739 Lipopolysaccharide export system permease LptF/LptG H9K48_RS02165 PF03739 Lipopolysaccharide export system permease LptF/LptG H9K48_RS02175 PF10011 Predicted membrane protein (DUF2254) H9K48_RS02185 PF00106 short chain dehydrogenase H9K48_RS02195 PF00529 HlyD membrane-fusion protein of T1SS H9K48_RS02195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS02305 PF00145 C-5 cytosine-specific DNA methylase H9K48_RS02315 PF01522 Polysaccharide deacetylase H9K48_RS02320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K48_RS02325 PF02378 Phosphotransferase system, EIIC H9K48_RS02330 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit H9K48_RS02335 PF02056 Family 4 glycosyl hydrolase H9K48_RS02335 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9K48_RS02340 PF04794 YdjC-like protein H9K48_RS02345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K48_RS02345 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS02350 PF00072 Response regulator receiver domain H9K48_RS02395 PF00171 Aldehyde dehydrogenase family H9K48_RS02425 PF17200 Single Cache domain 2 H9K48_RS02425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS02425 PF00672 HAMP domain H9K48_RS02465 PF01464 Transglycosylase SLT domain H9K48_RS02465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H9K48_RS02470 PF04362 Bacterial Fe(2+) trafficking H9K48_RS02475 PF00633 Helix-hairpin-helix motif H9K48_RS02475 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K48_RS02475 PF14815 NUDIX domain H9K48_RS02480 PF02390 Putative methyltransferase H9K48_RS02485 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9K48_RS02490 PF04960 Glutaminase H9K48_RS02495 PF06969 HemN C-terminal domain H9K48_RS02495 PF04055 Radical SAM superfamily H9K48_RS02500 PF01725 Ham1 family H9K48_RS02510 PF02594 Uncharacterised ACR, YggU family COG1872 H9K48_RS02515 PF02325 YGGT family H9K48_RS02520 PF14748 Pyrroline-5-carboxylate reductase dimerisation H9K48_RS02520 PF03807 NADP oxidoreductase coenzyme F420-dependent H9K48_RS02525 PF01168 Alanine racemase, N-terminal domain H9K48_RS02530 PF00437 Type II/IV secretion system protein H9K48_RS02535 PF00437 Type II/IV secretion system protein H9K48_RS02540 PF03652 Holliday junction resolvase H9K48_RS02545 PF02622 Uncharacterized ACR, COG1678 H9K48_RS02550 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H9K48_RS02550 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H9K48_RS02555 PF04452 RNA methyltransferase H9K48_RS02560 PF04231 Endonuclease I H9K48_RS02565 PF10263 SprT-like family H9K48_RS02565 PF17283 SprT-like zinc ribbon domain H9K48_RS02575 PF00438 S-adenosylmethionine synthetase, N-terminal domain H9K48_RS02575 PF02772 S-adenosylmethionine synthetase, central domain H9K48_RS02575 PF02773 S-adenosylmethionine synthetase, C-terminal domain H9K48_RS02580 PF02779 Transketolase, pyrimidine binding domain H9K48_RS02580 PF02780 Transketolase, C-terminal domain H9K48_RS02580 PF00456 Transketolase, thiamine diphosphate binding domain H9K48_RS02585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS02585 PF03466 LysR substrate binding domain H9K48_RS02590 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS02590 PF00593 TonB dependent receptor H9K48_RS02595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K48_RS02595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K48_RS02600 PF00162 Phosphoglycerate kinase H9K48_RS02605 PF01116 Fructose-bisphosphate aldolase class-II H9K48_RS02610 PF05552 Conserved TM helix H9K48_RS02610 PF00924 Mechanosensitive ion channel H9K48_RS02615 PF04073 Aminoacyl-tRNA editing domain H9K48_RS02620 PF01810 LysE type translocator H9K48_RS02625 PF03466 LysR substrate binding domain H9K48_RS02625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS02630 PF04402 Protein of unknown function (DUF541) H9K48_RS02635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K48_RS02635 PF01842 ACT domain H9K48_RS02635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K48_RS02640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H9K48_RS02645 PF01812 5-formyltetrahydrofolate cyclo-ligase family H9K48_RS02655 PF05164 Cell division protein ZapA H9K48_RS02660 PF03695 Uncharacterised protein family (UPF0149) H9K48_RS02665 PF01494 FAD binding domain H9K48_RS02670 PF01494 FAD binding domain H9K48_RS02685 PF01571 Aminomethyltransferase folate-binding domain H9K48_RS02690 PF03937 Flavinator of succinate dehydrogenase H9K48_RS02695 PF00890 FAD binding domain H9K48_RS02695 PF02910 Fumarate reductase flavoprotein C-term H9K48_RS02700 PF04542 Sigma-70 region 2 H9K48_RS02700 PF08281 Sigma-70, region 4 H9K48_RS02705 PF03872 Anti sigma-E protein RseA, N-terminal domain H9K48_RS02705 PF03873 Anti sigma-E protein RseA, C-terminal domain H9K48_RS02710 PF03888 MucB/RseB N-terminal domain H9K48_RS02710 PF17188 MucB/RseB C-terminal domain H9K48_RS02720 PF00679 Elongation factor G C-terminus H9K48_RS02720 PF00009 Elongation factor Tu GTP binding domain H9K48_RS02720 PF03144 Elongation factor Tu domain 2 H9K48_RS02720 PF06421 GTP-binding protein LepA C-terminus H9K48_RS02725 PF10502 Signal peptidase, peptidase S26 H9K48_RS02730 PF00035 Double-stranded RNA binding motif H9K48_RS02730 PF14622 Ribonuclease-III-like H9K48_RS02735 PF07650 KH domain H9K48_RS02735 PF01926 50S ribosome-binding GTPase H9K48_RS02740 PF11967 Recombination protein O N terminal H9K48_RS02740 PF02565 Recombination protein O C terminal H9K48_RS02745 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H9K48_RS02750 PF01648 4'-phosphopantetheinyl transferase superfamily H9K48_RS02755 PF00672 HAMP domain H9K48_RS02755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS02755 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS02755 PF01627 Hpt domain H9K48_RS02755 PF00072 Response regulator receiver domain H9K48_RS02755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K48_RS02760 PF01938 TRAM domain H9K48_RS02760 PF05958 tRNA (Uracil-5-)-methyltransferase H9K48_RS02765 PF04607 Region found in RelA / SpoT proteins H9K48_RS02765 PF02824 TGS domain H9K48_RS02765 PF13291 ACT domain H9K48_RS02770 PF03819 MazG nucleotide pyrophosphohydrolase domain H9K48_RS02775 PF06418 CTP synthase N-terminus H9K48_RS02775 PF00117 Glutamine amidotransferase class-I H9K48_RS02780 PF00113 Enolase, C-terminal TIM barrel domain H9K48_RS02780 PF03952 Enolase, N-terminal domain H9K48_RS02785 PF04977 Septum formation initiator H9K48_RS02790 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H9K48_RS02795 PF02542 YgbB family H9K48_RS02800 PF01142 tRNA pseudouridine synthase D (TruD) H9K48_RS02805 PF01975 Survival protein SurE H9K48_RS02815 PF01476 LysM domain H9K48_RS02815 PF01551 Peptidase family M23 H9K48_RS02820 PF04542 Sigma-70 region 2 H9K48_RS02820 PF04545 Sigma-70, region 4 H9K48_RS02820 PF04539 Sigma-70 region 3 H9K48_RS02820 PF00140 Sigma-70 factor, region 1.2 H9K48_RS02825 PF05192 MutS domain III H9K48_RS02825 PF01624 MutS domain I H9K48_RS02825 PF05188 MutS domain II H9K48_RS02825 PF05190 MutS family domain IV H9K48_RS02825 PF00488 MutS domain V H9K48_RS02830 PF02464 Competence-damaged protein H9K48_RS02835 PF00154 recA bacterial DNA recombination protein H9K48_RS02840 PF02631 RecX family H9K48_RS02845 PF02272 DHHA1 domain H9K48_RS02845 PF01411 tRNA synthetases class II (A) H9K48_RS02845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9K48_RS02850 PF00696 Amino acid kinase family H9K48_RS02850 PF01842 ACT domain H9K48_RS02850 PF13840 ACT domain H9K48_RS02855 PF02599 Global regulator protein family H9K48_RS02910 PF04277 Oxaloacetate decarboxylase, gamma chain H9K48_RS02915 PF00682 HMGL-like H9K48_RS02915 PF02436 Conserved carboxylase domain H9K48_RS02915 PF00364 Biotin-requiring enzyme H9K48_RS02920 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit H9K48_RS02925 PF08240 Alcohol dehydrogenase GroES-like domain H9K48_RS02925 PF00107 Zinc-binding dehydrogenase H9K48_RS02930 PF09335 SNARE associated Golgi protein H9K48_RS02935 PF00675 Insulinase (Peptidase family M16) H9K48_RS02935 PF05193 Peptidase M16 inactive domain H9K48_RS02940 PF04262 Glutamate-cysteine ligase H9K48_RS02950 PF02664 S-Ribosylhomocysteinase (LuxS) H9K48_RS02955 PF00571 CBS domain H9K48_RS02955 PF03471 Transporter associated domain H9K48_RS02955 PF01595 Cyclin M transmembrane N-terminal domain H9K48_RS02960 PF01578 Cytochrome C assembly protein H9K48_RS02965 PF00448 SRP54-type protein, GTPase domain H9K48_RS02965 PF02881 SRP54-type protein, helical bundle domain H9K48_RS02965 PF02978 Signal peptide binding domain H9K48_RS02970 PF00886 Ribosomal protein S16 H9K48_RS02975 PF05239 PRC-barrel domain H9K48_RS02975 PF01782 RimM N-terminal domain H9K48_RS02980 PF01746 tRNA (Guanine-1)-methyltransferase H9K48_RS02985 PF01245 Ribosomal protein L19 H9K48_RS02990 PF03884 DNA gyrase inhibitor YacG H9K48_RS02995 PF07072 Cell division protein H9K48_RS03000 PF01121 Dephospho-CoA kinase H9K48_RS03005 PF06750 Bacterial Peptidase A24 N-terminal domain H9K48_RS03005 PF01478 Type IV leader peptidase family H9K48_RS03010 PF00482 Type II secretion system (T2SS), protein F H9K48_RS03015 PF00437 Type II/IV secretion system protein H9K48_RS03015 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9K48_RS03020 PF07963 Prokaryotic N-terminal methylation motif H9K48_RS03020 PF00114 Pilin (bacterial filament) H9K48_RS03025 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H9K48_RS03025 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H9K48_RS03030 PF01510 N-acetylmuramoyl-L-alanine amidase H9K48_RS03035 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS03035 PF07729 FCD domain H9K48_RS03040 PF00456 Transketolase, thiamine diphosphate binding domain H9K48_RS03040 PF17831 Pyruvate dehydrogenase E1 component middle domain H9K48_RS03045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K48_RS03045 PF00364 Biotin-requiring enzyme H9K48_RS03045 PF02817 e3 binding domain H9K48_RS03050 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS03050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K48_RS03055 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS03060 PF00156 Phosphoribosyl transferase domain H9K48_RS03065 PF00484 Carbonic anhydrase H9K48_RS03070 PF01740 STAS domain H9K48_RS03070 PF00916 Sulfate permease family H9K48_RS03075 PF00005 ABC transporter H9K48_RS03080 PF01061 ABC-2 type transporter H9K48_RS03085 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K48_RS03090 PF02569 Pantoate-beta-alanine ligase H9K48_RS03095 PF02548 Ketopantoate hydroxymethyltransferase H9K48_RS03100 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9K48_RS03105 PF01743 Poly A polymerase head domain H9K48_RS03105 PF12626 Polymerase A arginine-rich C-terminus H9K48_RS03105 PF12627 Probable RNA and SrmB- binding site of polymerase A H9K48_RS03110 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K48_RS03115 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9K48_RS03120 PF03749 Sugar fermentation stimulation protein RE domain H9K48_RS03120 PF17746 SfsA N-terminal OB domain H9K48_RS03125 PF00270 DEAD/DEAH box helicase H9K48_RS03125 PF04408 Helicase associated domain (HA2) H9K48_RS03125 PF00271 Helicase conserved C-terminal domain H9K48_RS03125 PF08482 ATP-dependent helicase C-terminal H9K48_RS03130 PF00912 Transglycosylase H9K48_RS03130 PF00905 Penicillin binding protein transpeptidase domain H9K48_RS03130 PF14814 Bifunctional transglycosylase second domain H9K48_RS03135 PF01734 Patatin-like phospholipase H9K48_RS03140 PF00330 Aconitase family (aconitate hydratase) H9K48_RS03140 PF06434 Aconitate hydratase 2 N-terminus H9K48_RS03140 PF11791 Aconitate B N-terminal domain H9K48_RS03145 PF06062 Uncharacterised protein family (UPF0231) H9K48_RS03150 PF00543 Nitrogen regulatory protein P-II H9K48_RS03155 PF00909 Ammonium Transporter Family H9K48_RS03160 PF13416 Bacterial extracellular solute-binding protein H9K48_RS03170 PF08402 TOBE domain H9K48_RS03170 PF00005 ABC transporter H9K48_RS03175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K48_RS03175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K48_RS03175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K48_RS03175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K48_RS03180 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain H9K48_RS03180 PF06165 Glycosyltransferase family 36 H9K48_RS03185 PF00728 Glycosyl hydrolase family 20, catalytic domain H9K48_RS03185 PF02838 Glycosyl hydrolase family 20, domain 2 H9K48_RS03190 PF01869 BadF/BadG/BcrA/BcrD ATPase family H9K48_RS03200 PF00005 ABC transporter H9K48_RS03200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS03205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS03205 PF00005 ABC transporter H9K48_RS03210 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K48_RS03210 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS03215 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS03220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS03225 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS03225 PF00072 Response regulator receiver domain H9K48_RS03225 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS03230 PF05175 Methyltransferase small domain H9K48_RS03230 PF08468 Methyltransferase small domain N-terminal H9K48_RS03235 PF01594 AI-2E family transporter H9K48_RS03240 PF00202 Aminotransferase class-III H9K48_RS03245 PF01521 Iron-sulphur cluster biosynthesis H9K48_RS03255 PF00873 AcrB/AcrD/AcrF family H9K48_RS03260 PF08525 Opacity-associated protein A N-terminal motif H9K48_RS03260 PF01551 Peptidase family M23 H9K48_RS03260 PF01476 LysM domain H9K48_RS03265 PF00579 tRNA synthetases class I (W and Y) H9K48_RS03275 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family H9K48_RS03280 PF13609 Gram-negative porin H9K48_RS03285 PF03449 Transcription elongation factor, N-terminal H9K48_RS03285 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K48_RS03290 PF01985 CRS1 / YhbY (CRM) domain H9K48_RS03295 PF01728 FtsJ-like methyltransferase H9K48_RS03300 PF01434 Peptidase family M41 H9K48_RS03300 PF06480 FtsH Extracellular H9K48_RS03300 PF17862 AAA+ lid domain H9K48_RS03300 PF00004 ATPase family associated with various cellular activities (AAA) H9K48_RS03305 PF00809 Pterin binding enzyme H9K48_RS03310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K48_RS03310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K48_RS03310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K48_RS03310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K48_RS03315 PF03840 Preprotein translocase SecG subunit H9K48_RS03330 PF02576 RimP N-terminal domain H9K48_RS03330 PF17384 RimP C-terminal SH3 domain H9K48_RS03335 PF13184 NusA-like KH domain H9K48_RS03335 PF08529 NusA N-terminal domain H9K48_RS03335 PF00575 S1 RNA binding domain H9K48_RS03340 PF08364 Bacterial translation initiation factor IF-2 associated region H9K48_RS03340 PF11987 Translation-initiation factor 2 H9K48_RS03340 PF00009 Elongation factor Tu GTP binding domain H9K48_RS03340 PF04760 Translation initiation factor IF-2, N-terminal region H9K48_RS03345 PF02033 Ribosome-binding factor A H9K48_RS03350 PF09157 Pseudouridine synthase II TruB, C-terminal H9K48_RS03350 PF16198 tRNA pseudouridylate synthase B C-terminal domain H9K48_RS03350 PF01509 TruB family pseudouridylate synthase (N terminal domain) H9K48_RS03355 PF00312 Ribosomal protein S15 H9K48_RS03360 PF00013 KH domain H9K48_RS03360 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H9K48_RS03360 PF01138 3' exoribonuclease family, domain 1 H9K48_RS03360 PF03725 3' exoribonuclease family, domain 2 H9K48_RS03360 PF00575 S1 RNA binding domain H9K48_RS03365 PF13181 Tetratricopeptide repeat H9K48_RS03365 PF07719 Tetratricopeptide repeat H9K48_RS03375 PF01554 MatE H9K48_RS03380 PF01136 Peptidase family U32 H9K48_RS03385 PF01136 Peptidase family U32 H9K48_RS03390 PF00563 EAL domain H9K48_RS03390 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS03390 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS03395 PF02036 SCP-2 sterol transfer family H9K48_RS03400 PF13508 Acetyltransferase (GNAT) domain H9K48_RS03420 PF16658 Class II release factor RF3, C-terminal domain H9K48_RS03420 PF00009 Elongation factor Tu GTP binding domain H9K48_RS03420 PF03144 Elongation factor Tu domain 2 H9K48_RS03430 PF01026 TatD related DNase H9K48_RS03435 PF07670 Nucleoside recognition H9K48_RS03435 PF07662 Na+ dependent nucleoside transporter C-terminus H9K48_RS03435 PF01773 Na+ dependent nucleoside transporter N-terminus H9K48_RS03440 PF01791 DeoC/LacD family aldolase H9K48_RS03445 PF00591 Glycosyl transferase family, a/b domain H9K48_RS03445 PF02885 Glycosyl transferase family, helical bundle domain H9K48_RS03445 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain H9K48_RS03450 PF01676 Metalloenzyme superfamily H9K48_RS03455 PF01048 Phosphorylase superfamily H9K48_RS03465 PF18429 Domain of unknown function (DUF5609) H9K48_RS03475 PF18073 Rubredoxin metal binding domain H9K48_RS03480 PF00679 Elongation factor G C-terminus H9K48_RS03480 PF00009 Elongation factor Tu GTP binding domain H9K48_RS03480 PF03144 Elongation factor Tu domain 2 H9K48_RS03480 PF03764 Elongation factor G, domain IV H9K48_RS03480 PF14492 Elongation Factor G, domain II H9K48_RS03485 PF03466 LysR substrate binding domain H9K48_RS03485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS03495 PF00501 AMP-binding enzyme H9K48_RS03500 PF02805 Metal binding domain of Ada H9K48_RS03500 PF12833 Helix-turn-helix domain H9K48_RS03525 PF04972 BON domain H9K48_RS03525 PF00263 Bacterial type II and III secretion system protein H9K48_RS03525 PF13629 Pilus formation protein N terminal region H9K48_RS03555 PF00437 Type II/IV secretion system protein H9K48_RS03585 PF03466 LysR substrate binding domain H9K48_RS03585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS03590 PF13520 Amino acid permease H9K48_RS03595 PF04074 YhcH/YjgK/YiaL H9K48_RS03600 PF00703 Glycosyl hydrolases family 2 H9K48_RS03600 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9K48_RS03600 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9K48_RS03600 PF16353 Domain of unknown function(DUF4981) H9K48_RS03600 PF02929 Beta galactosidase small chain H9K48_RS03605 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS03610 PF16363 GDP-mannose 4,6 dehydratase H9K48_RS03615 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain H9K48_RS03615 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain H9K48_RS03620 PF10509 Galactokinase galactose-binding signature H9K48_RS03620 PF08544 GHMP kinases C terminal H9K48_RS03620 PF00288 GHMP kinases N terminal domain H9K48_RS03625 PF01263 Aldose 1-epimerase H9K48_RS03630 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS03645 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS03650 PF01588 Putative tRNA binding domain H9K48_RS03665 PF01544 CorA-like Mg2+ transporter protein H9K48_RS03670 PF01266 FAD dependent oxidoreductase H9K48_RS03670 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H9K48_RS03675 PF08220 DeoR-like helix-turn-helix domain H9K48_RS03675 PF00455 DeoR C terminal sensor domain H9K48_RS03680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H9K48_RS03680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H9K48_RS03685 PF00230 Major intrinsic protein H9K48_RS03690 PF07690 Major Facilitator Superfamily H9K48_RS03695 PF03009 Glycerophosphoryl diester phosphodiesterase family H9K48_RS03700 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle H9K48_RS03700 PF14602 Hexapeptide repeat of succinyl-transferase H9K48_RS03705 PF07130 YebG protein H9K48_RS03710 PF03466 LysR substrate binding domain H9K48_RS03710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS03720 PF11893 Domain of unknown function (DUF3413) H9K48_RS03720 PF00884 Sulfatase H9K48_RS03725 PF17946 RecC C-terminal domain H9K48_RS03730 PF13361 UvrD-like helicase C-terminal domain H9K48_RS03730 PF00580 UvrD/REP helicase N-terminal domain H9K48_RS03730 PF12705 PD-(D/E)XK nuclease superfamily H9K48_RS03735 PF13538 UvrD-like helicase C-terminal domain H9K48_RS03745 PF00696 Amino acid kinase family H9K48_RS03745 PF00583 Acetyltransferase (GNAT) family H9K48_RS03755 PF06725 3D domain H9K48_RS03755 PF03562 MltA specific insert domain H9K48_RS03760 PF00899 ThiF family H9K48_RS03765 PF02657 Fe-S metabolism associated domain H9K48_RS03770 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS03770 PF17158 Membrane-associated sensor, integral membrane domain H9K48_RS03775 PF00266 Aminotransferase class-V H9K48_RS03780 PF01965 DJ-1/PfpI family H9K48_RS03785 PF02558 Ketopantoate reductase PanE/ApbA H9K48_RS03785 PF08546 Ketopantoate reductase PanE/ApbA C terminal H9K48_RS03790 PF03502 Nucleoside-specific channel-forming protein, Tsx H9K48_RS03810 PF04542 Sigma-70 region 2 H9K48_RS03810 PF04545 Sigma-70, region 4 H9K48_RS03820 PF07690 Major Facilitator Superfamily H9K48_RS03825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K48_RS03830 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9K48_RS03830 PF03923 Uncharacterized lipoprotein H9K48_RS03835 PF05175 Methyltransferase small domain H9K48_RS03840 PF01722 BolA-like protein H9K48_RS03845 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) H9K48_RS03845 PF11973 NQRA C-terminal domain H9K48_RS03850 PF03116 NQR2, RnfD, RnfE family H9K48_RS03855 PF04205 FMN-binding domain H9K48_RS03860 PF02508 Rnf-Nqr subunit, membrane protein H9K48_RS03865 PF02508 Rnf-Nqr subunit, membrane protein H9K48_RS03870 PF00970 Oxidoreductase FAD-binding domain H9K48_RS03870 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K48_RS03870 PF00175 Oxidoreductase NAD-binding domain H9K48_RS03875 PF02424 ApbE family H9K48_RS03890 PF11798 IMS family HHH motif H9K48_RS03890 PF11799 impB/mucB/samB family C-terminal domain H9K48_RS03890 PF00817 impB/mucB/samB family H9K48_RS03895 PF09382 RQC domain H9K48_RS03895 PF16124 RecQ zinc-binding H9K48_RS03895 PF00570 HRDC domain H9K48_RS03895 PF00271 Helicase conserved C-terminal domain H9K48_RS03895 PF00270 DEAD/DEAH box helicase H9K48_RS03900 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K48_RS03900 PF03449 Transcription elongation factor, N-terminal H9K48_RS03915 PF00209 Sodium:neurotransmitter symporter family H9K48_RS03925 PF06786 Uncharacterised protein family (UPF0253) H9K48_RS03935 PF04073 Aminoacyl-tRNA editing domain H9K48_RS03935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K48_RS03935 PF03129 Anticodon binding domain H9K48_RS03940 PF01980 tRNA-methyltransferase O H9K48_RS03940 PF18389 TrmO C-terminal domain H9K48_RS03945 PF01197 Ribosomal protein L31 H9K48_RS03950 PF00444 Ribosomal protein L36 H9K48_RS03955 PF03806 AbgT putative transporter family H9K48_RS03960 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H9K48_RS03985 PF04287 tRNA pseudouridine synthase C H9K48_RS03990 PF00849 RNA pseudouridylate synthase H9K48_RS03995 PF11944 Protein of unknown function (DUF3461) H9K48_RS04000 PF08335 GlnD PII-uridylyltransferase H9K48_RS04000 PF01909 Nucleotidyltransferase domain H9K48_RS04000 PF01842 ACT domain H9K48_RS04000 PF01966 HD domain H9K48_RS04005 PF00557 Metallopeptidase family M24 H9K48_RS04010 PF00318 Ribosomal protein S2 H9K48_RS04015 PF00889 Elongation factor TS H9K48_RS04020 PF00696 Amino acid kinase family H9K48_RS04025 PF01765 Ribosome recycling factor H9K48_RS04030 PF01255 Putative undecaprenyl diphosphate synthase H9K48_RS04040 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H9K48_RS04040 PF13288 DXP reductoisomerase C-terminal domain H9K48_RS04040 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H9K48_RS04045 PF17820 PDZ domain H9K48_RS04045 PF02163 Peptidase family M50 H9K48_RS04050 PF01103 Surface antigen H9K48_RS04050 PF07244 Surface antigen variable number repeat H9K48_RS04055 PF03938 Outer membrane protein (OmpH-like) H9K48_RS04060 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H9K48_RS04060 PF00132 Bacterial transferase hexapeptide (six repeats) H9K48_RS04065 PF07977 FabA-like domain H9K48_RS04070 PF00132 Bacterial transferase hexapeptide (six repeats) H9K48_RS04070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H9K48_RS04075 PF02684 Lipid-A-disaccharide synthetase H9K48_RS04080 PF01351 Ribonuclease HII H9K48_RS04085 PF02811 PHP domain H9K48_RS04085 PF14579 Helix-hairpin-helix motif H9K48_RS04085 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K48_RS04085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K48_RS04085 PF01336 OB-fold nucleic acid binding domain H9K48_RS04090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H9K48_RS04095 PF11734 TilS substrate C-terminal domain H9K48_RS04095 PF09179 TilS substrate binding domain H9K48_RS04095 PF01171 PP-loop family H9K48_RS04100 PF00034 Cytochrome c H9K48_RS04105 PF00543 Nitrogen regulatory protein P-II H9K48_RS04110 PF03372 Endonuclease/Exonuclease/phosphatase family H9K48_RS04120 PF01476 LysM domain H9K48_RS04120 PF01464 Transglycosylase SLT domain H9K48_RS04125 PF16123 Hydroxyacylglutathione hydrolase C-terminus H9K48_RS04125 PF00753 Metallo-beta-lactamase superfamily H9K48_RS04130 PF08241 Methyltransferase domain H9K48_RS04135 PF00075 RNase H H9K48_RS04140 PF00929 Exonuclease H9K48_RS04150 PF01740 STAS domain H9K48_RS04150 PF00916 Sulfate permease family H9K48_RS04155 PF02770 Acyl-CoA dehydrogenase, middle domain H9K48_RS04155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K48_RS04155 PF09317 Domain of unknown function (DUF1974) H9K48_RS04155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K48_RS04160 PF13580 SIS domain H9K48_RS04165 PF13230 Glutamine amidotransferases class-II H9K48_RS04170 PF00551 Formyl transferase H9K48_RS04175 PF00586 AIR synthase related protein, N-terminal domain H9K48_RS04175 PF02769 AIR synthase related protein, C-terminal domain H9K48_RS04185 PF00860 Permease family H9K48_RS04200 PF03358 NADPH-dependent FMN reductase H9K48_RS04205 PF03960 ArsC family H9K48_RS04210 PF01435 Peptidase family M48 H9K48_RS04210 PF13181 Tetratricopeptide repeat H9K48_RS04220 PF01594 AI-2E family transporter H9K48_RS04225 PF00578 AhpC/TSA family H9K48_RS04230 PF01842 ACT domain H9K48_RS04235 PF00701 Dihydrodipicolinate synthetase family H9K48_RS04240 PF06804 NlpB/DapX lipoprotein H9K48_RS04255 PF07687 Peptidase dimerisation domain H9K48_RS04255 PF01546 Peptidase family M20/M25/M40 H9K48_RS04260 PF03960 ArsC family H9K48_RS04280 PF11143 Protein of unknown function (DUF2919) H9K48_RS04285 PF04261 Dyp-type peroxidase family H9K48_RS04290 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS04290 PF00700 Bacterial flagellin C-terminal helical region H9K48_RS04290 PF07196 Flagellin hook IN motif H9K48_RS04295 PF00700 Bacterial flagellin C-terminal helical region H9K48_RS04295 PF07196 Flagellin hook IN motif H9K48_RS04295 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS04300 PF00700 Bacterial flagellin C-terminal helical region H9K48_RS04300 PF07196 Flagellin hook IN motif H9K48_RS04300 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS04305 PF03646 FlaG protein H9K48_RS04310 PF07196 Flagellin hook IN motif H9K48_RS04310 PF07195 Flagellar hook-associated protein 2 C-terminus H9K48_RS04310 PF02465 Flagellar hook-associated protein 2 N-terminus H9K48_RS04320 PF02561 Flagellar protein FliS H9K48_RS04325 PF02954 Bacterial regulatory protein, Fis family H9K48_RS04325 PF06490 Flagellar regulatory protein FleQ H9K48_RS04325 PF00158 Sigma-54 interaction domain H9K48_RS04330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS04330 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS04330 PF13188 PAS domain H9K48_RS04335 PF02954 Bacterial regulatory protein, Fis family H9K48_RS04335 PF00072 Response regulator receiver domain H9K48_RS04335 PF00158 Sigma-54 interaction domain H9K48_RS04340 PF02049 Flagellar hook-basal body complex protein FliE H9K48_RS04345 PF01514 Secretory protein of YscJ/FliF family H9K48_RS04345 PF08345 Flagellar M-ring protein C-terminal H9K48_RS04350 PF14841 FliG middle domain H9K48_RS04350 PF01706 FliG C-terminal domain H9K48_RS04350 PF14842 FliG N-terminal domain H9K48_RS04360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K48_RS04360 PF18269 T3SS EscN ATPase C-terminal domain H9K48_RS04380 PF02154 Flagellar motor switch protein FliM H9K48_RS04380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K48_RS04385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K48_RS04390 PF04347 Flagellar biosynthesis protein, FliO H9K48_RS04395 PF00813 FliP family H9K48_RS04400 PF01313 Bacterial export proteins, family 3 H9K48_RS04405 PF01311 Bacterial export proteins, family 1 H9K48_RS04410 PF01312 FlhB HrpN YscU SpaS Family H9K48_RS04415 PF00771 FHIPEP family H9K48_RS04420 PF00448 SRP54-type protein, GTPase domain H9K48_RS04425 PF10609 NUBPL iron-transfer P-loop NTPase H9K48_RS04430 PF04542 Sigma-70 region 2 H9K48_RS04430 PF04539 Sigma-70 region 3 H9K48_RS04430 PF04545 Sigma-70, region 4 H9K48_RS04435 PF00072 Response regulator receiver domain H9K48_RS04440 PF04344 Chemotaxis phosphatase, CheZ H9K48_RS04445 PF00072 Response regulator receiver domain H9K48_RS04445 PF01627 Hpt domain H9K48_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS04445 PF02895 Signal transducing histidine kinase, homodimeric domain H9K48_RS04445 PF01584 CheW-like domain H9K48_RS04450 PF01339 CheB methylesterase H9K48_RS04450 PF00072 Response regulator receiver domain H9K48_RS04455 PF13614 AAA domain H9K48_RS04465 PF01584 CheW-like domain H9K48_RS04475 PF00005 ABC transporter H9K48_RS04480 PF03379 CcmB protein H9K48_RS04485 PF01578 Cytochrome C assembly protein H9K48_RS04490 PF04995 Heme exporter protein D (CcmD) H9K48_RS04495 PF03100 CcmE H9K48_RS04500 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9K48_RS04500 PF01578 Cytochrome C assembly protein H9K48_RS04505 PF08534 Redoxin H9K48_RS04510 PF03918 Cytochrome C biogenesis protein H9K48_RS04520 PF04333 MlaA lipoprotein H9K48_RS04525 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K48_RS04530 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K48_RS04540 PF08281 Sigma-70, region 4 H9K48_RS04540 PF04542 Sigma-70 region 2 H9K48_RS04545 PF02803 Thiolase, C-terminal domain H9K48_RS04545 PF00108 Thiolase, N-terminal domain H9K48_RS04550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9K48_RS04550 PF00378 Enoyl-CoA hydratase/isomerase H9K48_RS04550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9K48_RS04560 PF00675 Insulinase (Peptidase family M16) H9K48_RS04560 PF05193 Peptidase M16 inactive domain H9K48_RS04560 PF16187 Middle or third domain of peptidase_M16 H9K48_RS04565 PF00300 Histidine phosphatase superfamily (branch 1) H9K48_RS04570 PF01713 Smr domain H9K48_RS04575 PF05175 Methyltransferase small domain H9K48_RS04580 PF01264 Chorismate synthase H9K48_RS04585 PF03458 UPF0126 domain H9K48_RS04590 PF04315 Elongation factor P hydroxylase H9K48_RS04595 PF08891 YfcL protein H9K48_RS04600 PF03358 NADPH-dependent FMN reductase H9K48_RS04605 PF01266 FAD dependent oxidoreductase H9K48_RS04605 PF05430 S-adenosyl-L-methionine-dependent methyltransferase H9K48_RS04610 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K48_RS04610 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K48_RS04615 PF11890 Domain of unknown function (DUF3410) H9K48_RS04615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K48_RS04615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K48_RS04620 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K48_RS04620 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K48_RS04630 PF01416 tRNA pseudouridine synthase H9K48_RS04635 PF01039 Carboxyl transferase domain H9K48_RS04635 PF17848 Acetyl-coA carboxylase zinc finger domain H9K48_RS04640 PF02875 Mur ligase family, glutamate ligase domain H9K48_RS04640 PF08245 Mur ligase middle domain H9K48_RS04645 PF05036 Sporulation related domain H9K48_RS04650 PF02674 Colicin V production protein H9K48_RS04655 PF00156 Phosphoribosyl transferase domain H9K48_RS04660 PF03466 LysR substrate binding domain H9K48_RS04660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS04665 PF00072 Response regulator receiver domain H9K48_RS04670 PF04304 Protein of unknown function (DUF454) H9K48_RS04675 PF00156 Phosphoribosyl transferase domain H9K48_RS04680 PF12169 DNA polymerase III subunits gamma and tau domain III H9K48_RS04680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H9K48_RS04680 PF12170 DNA polymerase III tau subunit V interacting with alpha H9K48_RS04685 PF02575 YbaB/EbfC DNA-binding family H9K48_RS04690 PF13662 Toprim domain H9K48_RS04690 PF02132 RecR protein H9K48_RS04695 PF00230 Major intrinsic protein H9K48_RS04705 PF01042 Endoribonuclease L-PSP H9K48_RS04710 PF03313 Serine dehydratase alpha chain H9K48_RS04720 PF03692 Putative zinc- or iron-chelating domain H9K48_RS04725 PF04226 Transglycosylase associated protein H9K48_RS04730 PF03692 Putative zinc- or iron-chelating domain H9K48_RS04735 PF05552 Conserved TM helix H9K48_RS04735 PF00924 Mechanosensitive ion channel H9K48_RS04740 PF03992 Antibiotic biosynthesis monooxygenase H9K48_RS04745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS04755 PF00245 Alkaline phosphatase H9K48_RS04770 PF13847 Methyltransferase domain H9K48_RS04775 PF00672 HAMP domain H9K48_RS04775 PF02743 Cache domain H9K48_RS04775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS04780 PF01263 Aldose 1-epimerase H9K48_RS04785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K48_RS04785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K48_RS04790 PF01641 SelR domain H9K48_RS04800 PF07023 Protein of unknown function (DUF1315) H9K48_RS04805 PF17763 Glutaminase/Asparaginase C-terminal domain H9K48_RS04805 PF00710 Asparaginase, N-terminal H9K48_RS04810 PF01343 Peptidase family S49 H9K48_RS04815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K48_RS04815 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS04820 PF00881 Nitroreductase family H9K48_RS04825 PF01751 Toprim domain H9K48_RS04825 PF01131 DNA topoisomerase H9K48_RS04835 PF00106 short chain dehydrogenase H9K48_RS04840 PF00850 Histone deacetylase domain H9K48_RS04850 PF11893 Domain of unknown function (DUF3413) H9K48_RS04850 PF00884 Sulfatase H9K48_RS04855 PF07208 Protein of unknown function (DUF1414) H9K48_RS04860 PF04245 37-kD nucleoid-associated bacterial protein H9K48_RS04875 PF03553 Na+/H+ antiporter family H9K48_RS04880 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9K48_RS04880 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9K48_RS04885 PF00520 Ion transport protein H9K48_RS04885 PF00027 Cyclic nucleotide-binding domain H9K48_RS04890 PF01914 MarC family integral membrane protein H9K48_RS04895 PF00171 Aldehyde dehydrogenase family H9K48_RS04895 PF00465 Iron-containing alcohol dehydrogenase H9K48_RS04910 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9K48_RS04910 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9K48_RS04915 PF00462 Glutaredoxin H9K48_RS04925 PF03553 Na+/H+ antiporter family H9K48_RS04925 PF13726 Na+-H+ antiporter family H9K48_RS04930 PF00929 Exonuclease H9K48_RS04935 PF00691 OmpA family H9K48_RS04935 PF18393 MotY N-terminal domain H9K48_RS04940 PF10952 Protein of unknown function (DUF2753) H9K48_RS04945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS04950 PF10576 Iron-sulfur binding domain of endonuclease III H9K48_RS04950 PF00633 Helix-hairpin-helix motif H9K48_RS04950 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K48_RS04955 PF02508 Rnf-Nqr subunit, membrane protein H9K48_RS04960 PF04205 FMN-binding domain H9K48_RS04965 PF03116 NQR2, RnfD, RnfE family H9K48_RS04970 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H9K48_RS04970 PF13375 RnfC Barrel sandwich hybrid domain H9K48_RS04970 PF10531 SLBB domain H9K48_RS04970 PF12838 4Fe-4S dicluster domain H9K48_RS04975 PF04060 Putative Fe-S cluster H9K48_RS04980 PF02508 Rnf-Nqr subunit, membrane protein H9K48_RS04990 PF00271 Helicase conserved C-terminal domain H9K48_RS04990 PF04851 Type III restriction enzyme, res subunit H9K48_RS04990 PF02151 UvrB/uvrC motif H9K48_RS04990 PF12344 Ultra-violet resistance protein B H9K48_RS04990 PF17757 UvrB interaction domain H9K48_RS04995 PF00072 Response regulator receiver domain H9K48_RS04995 PF02954 Bacterial regulatory protein, Fis family H9K48_RS04995 PF00158 Sigma-54 interaction domain H9K48_RS05000 PF01627 Hpt domain H9K48_RS05005 PF01933 Uncharacterised protein family UPF0052 H9K48_RS05010 PF04055 Radical SAM superfamily H9K48_RS05010 PF06463 Molybdenum Cofactor Synthesis C H9K48_RS05015 PF00994 Probable molybdopterin binding domain H9K48_RS05020 PF01967 MoaC family H9K48_RS05025 PF02597 ThiS family H9K48_RS05030 PF02391 MoaE protein H9K48_RS05035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS05040 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS05045 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K48_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS05050 PF00005 ABC transporter H9K48_RS05050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS05055 PF00005 ABC transporter H9K48_RS05055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS05060 PF13409 Glutathione S-transferase, N-terminal domain H9K48_RS05070 PF13194 Domain of unknown function (DUF4010) H9K48_RS05075 PF07085 DRTGG domain H9K48_RS05075 PF01515 Phosphate acetyl/butaryl transferase H9K48_RS05080 PF00871 Acetokinase family H9K48_RS05085 PF04217 Protein of unknown function, DUF412 H9K48_RS05095 PF02653 Branched-chain amino acid transport system / permease component H9K48_RS05100 PF00005 ABC transporter H9K48_RS05105 PF02903 Alpha amylase, N-terminal ig-like domain H9K48_RS05105 PF00128 Alpha amylase, catalytic domain H9K48_RS05110 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS05110 PF00072 Response regulator receiver domain H9K48_RS05115 PF01207 Dihydrouridine synthase (Dus) H9K48_RS05120 PF03695 Uncharacterised protein family (UPF0149) H9K48_RS05120 PF02810 SEC-C motif H9K48_RS05125 PF02600 Disulfide bond formation protein DsbB H9K48_RS05130 PF06450 Bacterial Na+/H+ antiporter B (NhaB) H9K48_RS05135 PF07840 FadR C-terminal domain H9K48_RS05135 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS05145 PF01588 Putative tRNA binding domain H9K48_RS05145 PF09334 tRNA synthetases class I (M) H9K48_RS05150 PF10609 NUBPL iron-transfer P-loop NTPase H9K48_RS05155 PF00485 Phosphoribulokinase / Uridine kinase family H9K48_RS05165 PF12557 Cob(I)alamin adenosyltransferase N terminal H9K48_RS05165 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP H9K48_RS05170 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9K48_RS05175 PF01740 STAS domain H9K48_RS05175 PF00916 Sulfate permease family H9K48_RS05180 PF12111 Polyribonucleotide phosphorylase C terminal H9K48_RS05180 PF10150 Ribonuclease E/G family H9K48_RS05180 PF00575 S1 RNA binding domain H9K48_RS05185 PF00849 RNA pseudouridylate synthase H9K48_RS05185 PF01479 S4 domain H9K48_RS05190 PF02545 Maf-like protein H9K48_RS05195 PF02620 Large ribosomal RNA subunit accumulation protein YceD H9K48_RS05200 PF01783 Ribosomal L32p protein family H9K48_RS05205 PF02504 Fatty acid synthesis protein H9K48_RS05210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9K48_RS05210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9K48_RS05215 PF00698 Acyl transferase domain H9K48_RS05225 PF00550 Phosphopantetheine attachment site H9K48_RS05230 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K48_RS05230 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K48_RS05235 PF01063 Amino-transferase class IV H9K48_RS05240 PF02618 YceG-like family H9K48_RS05245 PF02223 Thymidylate kinase H9K48_RS05250 PF09115 DNA polymerase III, delta subunit, C terminal H9K48_RS05255 PF01026 TatD related DNase H9K48_RS05260 PF00367 phosphotransferase system, EIIB H9K48_RS05260 PF02378 Phosphotransferase system, EIIC H9K48_RS05275 PF00209 Sodium:neurotransmitter symporter family H9K48_RS05290 PF01734 Patatin-like phospholipase H9K48_RS05295 PF00224 Pyruvate kinase, barrel domain H9K48_RS05295 PF02887 Pyruvate kinase, alpha/beta domain H9K48_RS05300 PF00480 ROK family H9K48_RS05305 PF01584 CheW-like domain H9K48_RS05305 PF00072 Response regulator receiver domain H9K48_RS05310 PF01336 OB-fold nucleic acid binding domain H9K48_RS05310 PF02811 PHP domain H9K48_RS05310 PF14579 Helix-hairpin-helix motif H9K48_RS05310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K48_RS05310 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K48_RS05325 PF00106 short chain dehydrogenase H9K48_RS05330 PF08496 Peptidase family S49 N-terminal H9K48_RS05330 PF01343 Peptidase family S49 H9K48_RS05335 PF02224 Cytidylate kinase H9K48_RS05340 PF00575 S1 RNA binding domain H9K48_RS05345 PF00216 Bacterial DNA-binding protein H9K48_RS05350 PF06305 Lipopolysaccharide assembly protein A domain H9K48_RS05355 PF18073 Rubredoxin metal binding domain H9K48_RS05360 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H9K48_RS05365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS05375 PF01370 NAD dependent epimerase/dehydratase family H9K48_RS05380 PF00535 Glycosyl transferase family 2 H9K48_RS05390 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase H9K48_RS05400 PF02470 MlaD protein H9K48_RS05405 PF04403 Paraquat-inducible protein A H9K48_RS05410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K48_RS05415 PF00034 Cytochrome c H9K48_RS05420 PF00384 Molybdopterin oxidoreductase H9K48_RS05420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K48_RS05420 PF01568 Molydopterin dinucleotide binding domain H9K48_RS05425 PF03916 Polysulphide reductase, NrfD H9K48_RS05430 PF13247 4Fe-4S dicluster domain H9K48_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS05435 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS05440 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS05440 PF00072 Response regulator receiver domain H9K48_RS05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS05445 PF03466 LysR substrate binding domain H9K48_RS05455 PF11412 Disulphide bond corrector protein DsbC H9K48_RS05455 PF02683 Cytochrome C biogenesis protein transmembrane region H9K48_RS05460 PF00085 Thioredoxin H9K48_RS05475 PF01938 TRAM domain H9K48_RS05475 PF05958 tRNA (Uracil-5-)-methyltransferase H9K48_RS05490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS05500 PF02687 FtsX-like permease family H9K48_RS05500 PF12704 MacB-like periplasmic core domain H9K48_RS05500 PF00005 ABC transporter H9K48_RS05505 PF00005 ABC transporter H9K48_RS05505 PF12704 MacB-like periplasmic core domain H9K48_RS05505 PF02687 FtsX-like permease family H9K48_RS05510 PF00005 ABC transporter H9K48_RS05510 PF02687 FtsX-like permease family H9K48_RS05510 PF12704 MacB-like periplasmic core domain H9K48_RS05515 PF00857 Isochorismatase family H9K48_RS05520 PF02311 AraC-like ligand binding domain H9K48_RS05520 PF12833 Helix-turn-helix domain H9K48_RS05530 PF08267 Cobalamin-independent synthase, N-terminal domain H9K48_RS05530 PF01717 Cobalamin-independent synthase, Catalytic domain H9K48_RS05540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS05540 PF00529 HlyD membrane-fusion protein of T1SS H9K48_RS05545 PF03466 LysR substrate binding domain H9K48_RS05545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS05565 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS05565 PF00672 HAMP domain H9K48_RS05570 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS05570 PF00072 Response regulator receiver domain H9K48_RS05575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS05575 PF00672 HAMP domain H9K48_RS05580 PF04055 Radical SAM superfamily H9K48_RS05580 PF08497 Radical SAM N-terminal H9K48_RS05580 PF11842 Domain of unknown function (DUF3362) H9K48_RS05585 PF00563 EAL domain H9K48_RS05585 PF01590 GAF domain H9K48_RS05585 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS05585 PF00360 Phytochrome region H9K48_RS05600 PF03466 LysR substrate binding domain H9K48_RS05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS05605 PF01717 Cobalamin-independent synthase, Catalytic domain H9K48_RS05605 PF08267 Cobalamin-independent synthase, N-terminal domain H9K48_RS05615 PF03795 YCII-related domain H9K48_RS05620 PF03061 Thioesterase superfamily H9K48_RS05625 PF04279 Intracellular septation protein A H9K48_RS05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS05635 PF00072 Response regulator receiver domain H9K48_RS05640 PF17327 Acyl homoserine lactone synthase H9K48_RS05645 PF00375 Sodium:dicarboxylate symporter family H9K48_RS05650 PF00501 AMP-binding enzyme H9K48_RS05650 PF13193 AMP-binding enzyme C-terminal domain H9K48_RS05655 PF00027 Cyclic nucleotide-binding domain H9K48_RS05655 PF13545 Crp-like helix-turn-helix domain H9K48_RS05660 PF00290 Tryptophan synthase alpha chain H9K48_RS05665 PF00291 Pyridoxal-phosphate dependent enzyme H9K48_RS05670 PF00218 Indole-3-glycerol phosphate synthase H9K48_RS05670 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H9K48_RS05675 PF02885 Glycosyl transferase family, helical bundle domain H9K48_RS05675 PF00591 Glycosyl transferase family, a/b domain H9K48_RS05680 PF00117 Glutamine amidotransferase class-I H9K48_RS05685 PF04715 Anthranilate synthase component I, N terminal region H9K48_RS05685 PF00425 chorismate binding enzyme H9K48_RS05690 PF08056 Tryptophan operon leader peptide H9K48_RS05695 PF02811 PHP domain H9K48_RS05700 PF01300 Telomere recombination H9K48_RS05710 PF01479 S4 domain H9K48_RS05710 PF00849 RNA pseudouridylate synthase H9K48_RS05715 PF04269 Protein of unknown function, DUF440 H9K48_RS05720 PF09285 Elongation factor P, C-terminal H9K48_RS05720 PF08207 Elongation factor P (EF-P) KOW-like domain H9K48_RS05720 PF01132 Elongation factor P (EF-P) OB domain H9K48_RS05730 PF03104 DNA polymerase family B, exonuclease domain H9K48_RS05730 PF00136 DNA polymerase family B H9K48_RS05735 PF00072 Response regulator receiver domain H9K48_RS05735 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS05740 PF01541 GIY-YIG catalytic domain H9K48_RS05740 PF02151 UvrB/uvrC motif H9K48_RS05740 PF08459 UvrC Helix-hairpin-helix N-terminal H9K48_RS05745 PF01066 CDP-alcohol phosphatidyltransferase H9K48_RS05770 PF00202 Aminotransferase class-III H9K48_RS05775 PF16653 Saccharopine dehydrogenase C-terminal domain H9K48_RS05775 PF03435 Saccharopine dehydrogenase NADP binding domain H9K48_RS05780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K48_RS05795 PF00994 Probable molybdopterin binding domain H9K48_RS05805 PF00268 Ribonucleotide reductase, small chain H9K48_RS05810 PF02867 Ribonucleotide reductase, barrel domain H9K48_RS05810 PF03477 ATP cone domain H9K48_RS05810 PF00317 Ribonucleotide reductase, all-alpha domain H9K48_RS05820 PF00521 DNA gyrase/topoisomerase IV, subunit A H9K48_RS05820 PF03989 DNA gyrase C-terminal domain, beta-propeller H9K48_RS05835 PF02335 Cytochrome c552 H9K48_RS05845 PF13247 4Fe-4S dicluster domain H9K48_RS05850 PF03916 Polysulphide reductase, NrfD H9K48_RS05855 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9K48_RS05855 PF01578 Cytochrome C assembly protein H9K48_RS05860 PF08534 Redoxin H9K48_RS05865 PF03918 Cytochrome C biogenesis protein H9K48_RS05875 PF00925 GTP cyclohydrolase II H9K48_RS05900 PF01471 Putative peptidoglycan binding domain H9K48_RS05900 PF03734 L,D-transpeptidase catalytic domain H9K48_RS05905 PF05951 Bacterial protein of unknown function (DUF882) H9K48_RS05910 PF00753 Metallo-beta-lactamase superfamily H9K48_RS05925 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K48_RS05935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K48_RS05940 PF07730 Histidine kinase H9K48_RS05940 PF17200 Single Cache domain 2 H9K48_RS05945 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS05945 PF00072 Response regulator receiver domain H9K48_RS05950 PF01047 MarR family H9K48_RS05955 PF02028 BCCT, betaine/carnitine/choline family transporter H9K48_RS05960 PF00672 HAMP domain H9K48_RS05960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS05980 PF00155 Aminotransferase class I and II H9K48_RS05995 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS05995 PF00155 Aminotransferase class I and II H9K48_RS06005 PF01336 OB-fold nucleic acid binding domain H9K48_RS06005 PF00152 tRNA synthetases class II (D, K and N) H9K48_RS06010 PF02743 Cache domain H9K48_RS06010 PF00672 HAMP domain H9K48_RS06010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS06015 PF01242 6-pyruvoyl tetrahydropterin synthase H9K48_RS06025 PF00563 EAL domain H9K48_RS06025 PF04940 Sensors of blue-light using FAD H9K48_RS06030 PF03315 Serine dehydratase beta chain H9K48_RS06030 PF03313 Serine dehydratase alpha chain H9K48_RS06035 PF03222 Tryptophan/tyrosine permease family H9K48_RS06040 PF00293 NUDIX domain H9K48_RS06050 PF00072 Response regulator receiver domain H9K48_RS06050 PF09308 LuxQ, periplasmic H9K48_RS06050 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS06055 PF00425 chorismate binding enzyme H9K48_RS06055 PF04715 Anthranilate synthase component I, N terminal region H9K48_RS06070 PF04317 YcjX-like family, DUF463 H9K48_RS06075 PF05128 Domain of unknown function (DUF697) H9K48_RS06080 PF18024 Helix-turn-helix domain H9K48_RS06080 PF00158 Sigma-54 interaction domain H9K48_RS06085 PF13302 Acetyltransferase (GNAT) domain H9K48_RS06100 PF13495 Phage integrase, N-terminal SAM-like domain H9K48_RS06100 PF00589 Phage integrase family H9K48_RS06110 PF05154 TM2 domain H9K48_RS06205 PF13614 AAA domain H9K48_RS06465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS06665 PF01810 LysE type translocator H9K48_RS06740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS06945 PF13333 Integrase core domain H9K48_RS06945 PF00665 Integrase core domain H9K48_RS06945 PF13276 HTH-like domain H9K48_RS06985 PF03553 Na+/H+ antiporter family H9K48_RS06990 PF00120 Glutamine synthetase, catalytic domain H9K48_RS06995 PF07722 Peptidase C26 H9K48_RS07000 PF07883 Cupin domain H9K48_RS07000 PF01381 Helix-turn-helix H9K48_RS07005 PF00171 Aldehyde dehydrogenase family H9K48_RS07010 PF01266 FAD dependent oxidoreductase H9K48_RS07015 PF00795 Carbon-nitrogen hydrolase H9K48_RS07020 PF04371 Porphyromonas-type peptidyl-arginine deiminase H9K48_RS07025 PF00171 Aldehyde dehydrogenase family H9K48_RS07030 PF00202 Aminotransferase class-III H9K48_RS07035 PF02833 DHHA2 domain H9K48_RS07035 PF01368 DHH family H9K48_RS07040 PF00563 EAL domain H9K48_RS07040 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS07050 PF02272 DHHA1 domain H9K48_RS07050 PF01411 tRNA synthetases class II (A) H9K48_RS07050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9K48_RS07055 PF12833 Helix-turn-helix domain H9K48_RS07065 PF01047 MarR family H9K48_RS07070 PF04237 YjbR H9K48_RS07080 PF01928 CYTH domain H9K48_RS07090 PF00132 Bacterial transferase hexapeptide (six repeats) H9K48_RS07090 PF12464 Maltose acetyltransferase H9K48_RS07105 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K48_RS07105 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS07105 PF01627 Hpt domain H9K48_RS07105 PF00072 Response regulator receiver domain H9K48_RS07105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS07105 PF00672 HAMP domain H9K48_RS07110 PF00563 EAL domain H9K48_RS07110 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS07110 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS07125 PF04204 Homoserine O-succinyltransferase H9K48_RS07135 PF13520 Amino acid permease H9K48_RS07140 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K48_RS07145 PF02074 Carboxypeptidase Taq (M32) metallopeptidase H9K48_RS07150 PF01810 LysE type translocator H9K48_RS07160 PF01235 Sodium:alanine symporter family H9K48_RS07185 PF00884 Sulfatase H9K48_RS07190 PF08521 Two-component sensor kinase N-terminal H9K48_RS07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS07190 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS07195 PF00072 Response regulator receiver domain H9K48_RS07195 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS07215 PF00501 AMP-binding enzyme H9K48_RS07225 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9K48_RS07230 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS07235 PF00005 ABC transporter H9K48_RS07235 PF00571 CBS domain H9K48_RS07250 PF02028 BCCT, betaine/carnitine/choline family transporter H9K48_RS07255 PF00583 Acetyltransferase (GNAT) family H9K48_RS07260 PF00202 Aminotransferase class-III H9K48_RS07265 PF06339 Ectoine synthase H9K48_RS07270 PF00696 Amino acid kinase family H9K48_RS07270 PF13840 ACT domain H9K48_RS07275 PF03150 Di-haem cytochrome c peroxidase H9K48_RS07275 PF00034 Cytochrome c H9K48_RS07290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS07305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS07305 PF00989 PAS fold H9K48_RS07305 PF17203 Single cache domain 3 H9K48_RS07305 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain H9K48_RS07310 PF12431 Transcriptional regulator H9K48_RS07310 PF00072 Response regulator receiver domain H9K48_RS07315 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain H9K48_RS07315 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain H9K48_RS07320 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9K48_RS07325 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain H9K48_RS07325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K48_RS07355 PF01590 GAF domain H9K48_RS07355 PF02954 Bacterial regulatory protein, Fis family H9K48_RS07355 PF00158 Sigma-54 interaction domain H9K48_RS07360 PF00171 Aldehyde dehydrogenase family H9K48_RS07380 PF12833 Helix-turn-helix domain H9K48_RS07395 PF00263 Bacterial type II and III secretion system protein H9K48_RS07395 PF03958 Bacterial type II/III secretion system short domain H9K48_RS07400 PF16697 Inner membrane component of T3SS, cytoplasmic domain H9K48_RS07400 PF16693 Inner membrane component of T3SS, periplasmic domain H9K48_RS07410 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF H9K48_RS07415 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) H9K48_RS07425 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI H9K48_RS07430 PF01514 Secretory protein of YscJ/FliF family H9K48_RS07440 PF02108 Flagellar assembly protein FliH H9K48_RS07450 PF02661 Fic/DOC family H9K48_RS07480 PF12146 Serine aminopeptidase, S33 H9K48_RS07485 PF12146 Serine aminopeptidase, S33 H9K48_RS07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS07490 PF03466 LysR substrate binding domain H9K48_RS07495 PF01312 FlhB HrpN YscU SpaS Family H9K48_RS07500 PF01311 Bacterial export proteins, family 1 H9K48_RS07505 PF01313 Bacterial export proteins, family 3 H9K48_RS07510 PF00813 FliP family H9K48_RS07515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K48_RS07530 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9K48_RS07530 PF18269 T3SS EscN ATPase C-terminal domain H9K48_RS07530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K48_RS07535 PF07201 HrpJ-like domain H9K48_RS07540 PF09059 TyeA H9K48_RS07560 PF00771 FHIPEP family H9K48_RS07565 PF09621 Type III secretion system regulator (LcrR) H9K48_RS07570 PF07216 LcrG protein H9K48_RS07575 PF04792 V antigen (LcrV) protein H9K48_RS07580 PF07720 Tetratricopeptide repeat H9K48_RS07590 PF05844 YopD protein H9K48_RS07600 PF01925 Sulfite exporter TauE/SafE H9K48_RS07605 PF01970 Tripartite tricarboxylate transporter TctA family H9K48_RS07635 PF00285 Citrate synthase, C-terminal domain H9K48_RS07640 PF00330 Aconitase family (aconitate hydratase) H9K48_RS07640 PF00694 Aconitase C-terminal domain H9K48_RS07645 PF04303 PrpF protein H9K48_RS07650 PF16177 Acetyl-coenzyme A synthetase N-terminus H9K48_RS07650 PF00501 AMP-binding enzyme H9K48_RS07650 PF13193 AMP-binding enzyme C-terminal domain H9K48_RS07660 PF00089 Trypsin H9K48_RS07675 PF04055 Radical SAM superfamily H9K48_RS07680 PF06508 Queuosine biosynthesis protein QueC H9K48_RS07685 PF17158 Membrane-associated sensor, integral membrane domain H9K48_RS07685 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS07695 PF00691 OmpA family H9K48_RS07695 PF05736 OprF membrane domain H9K48_RS07710 PF05736 OprF membrane domain H9K48_RS07710 PF00691 OmpA family H9K48_RS07725 PF10672 S-adenosylmethionine-dependent methyltransferase H9K48_RS07725 PF17785 PUA-like domain H9K48_RS07730 PF02743 Cache domain H9K48_RS07730 PF00672 HAMP domain H9K48_RS07730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS07735 PF00708 Acylphosphatase H9K48_RS07740 PF04358 DsrC like protein H9K48_RS07750 PF01027 Inhibitor of apoptosis-promoting Bax1 H9K48_RS07755 PF00005 ABC transporter H9K48_RS07760 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS07765 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS07770 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS07775 PF14824 Sirohaem biosynthesis protein central H9K48_RS07775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K48_RS07775 PF10414 Sirohaem synthase dimerisation region H9K48_RS07780 PF04461 Protein of unknown function (DUF520) H9K48_RS07785 PF00793 DAHP synthetase I family H9K48_RS07805 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF H9K48_RS07805 PF01189 16S rRNA methyltransferase RsmB/F H9K48_RS07805 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF H9K48_RS07810 PF02470 MlaD protein H9K48_RS07815 PF04403 Paraquat-inducible protein A H9K48_RS07820 PF00664 ABC transporter transmembrane region H9K48_RS07820 PF00005 ABC transporter H9K48_RS07825 PF13185 GAF domain H9K48_RS07830 PF17516 ProQ C-terminal domain H9K48_RS07830 PF04352 ProQ/FINO family H9K48_RS07835 PF00595 PDZ domain H9K48_RS07835 PF11818 C-terminal domain of tail specific protease (DUF3340) H9K48_RS07835 PF03572 Peptidase family S41 H9K48_RS07835 PF17804 Tail specific protease N-terminal domain H9K48_RS07845 PF11940 Domain of unknown function (DUF3458) Ig-like fold H9K48_RS07845 PF01433 Peptidase family M1 domain H9K48_RS07845 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H9K48_RS07855 PF05088 Bacterial NAD-glutamate dehydrogenase H9K48_RS07860 PF01180 Dihydroorotate dehydrogenase H9K48_RS07865 PF07126 Cell-division protein ZapC H9K48_RS07870 PF01170 Putative RNA methylase family UPF0020 H9K48_RS07870 PF02926 THUMP domain H9K48_RS07870 PF10672 S-adenosylmethionine-dependent methyltransferase H9K48_RS07880 PF16326 ABC transporter C-terminal domain H9K48_RS07880 PF00005 ABC transporter H9K48_RS07880 PF12848 ABC transporter H9K48_RS07890 PF04957 Ribosome modulation factor H9K48_RS07895 PF07977 FabA-like domain H9K48_RS07900 PF13654 AAA domain H9K48_RS07900 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K48_RS07905 PF06303 MatP N-terminal domain H9K48_RS07905 PF17414 MatP C-terminal ribbon-helix-helix domain H9K48_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS07925 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS07925 PF00072 Response regulator receiver domain H9K48_RS07925 PF09308 LuxQ, periplasmic H9K48_RS07940 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K48_RS07955 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP H9K48_RS07955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K48_RS07965 PF00403 Heavy-metal-associated domain H9K48_RS07980 PF13545 Crp-like helix-turn-helix domain H9K48_RS07980 PF00027 Cyclic nucleotide-binding domain H9K48_RS07985 PF00582 Universal stress protein family H9K48_RS07990 PF01171 PP-loop family H9K48_RS08010 PF08402 TOBE domain H9K48_RS08010 PF00005 ABC transporter H9K48_RS08015 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS08025 PF13416 Bacterial extracellular solute-binding protein H9K48_RS08030 PF13416 Bacterial extracellular solute-binding protein H9K48_RS08035 PF02146 Sir2 family H9K48_RS08045 PF00909 Ammonium Transporter Family H9K48_RS08055 PF03527 RHS protein H9K48_RS08055 PF05593 RHS Repeat H9K48_RS08070 PF13247 4Fe-4S dicluster domain H9K48_RS08075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K48_RS08075 PF00384 Molybdopterin oxidoreductase H9K48_RS08075 PF01568 Molydopterin dinucleotide binding domain H9K48_RS08085 PF02613 Nitrate reductase delta subunit H9K48_RS08105 PF02634 FdhD/NarQ family H9K48_RS08110 PF00005 ABC transporter H9K48_RS08110 PF12848 ABC transporter H9K48_RS08115 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS08120 PF00072 Response regulator receiver domain H9K48_RS08120 PF02954 Bacterial regulatory protein, Fis family H9K48_RS08120 PF00158 Sigma-54 interaction domain H9K48_RS08125 PF12849 PBP superfamily domain H9K48_RS08130 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS08135 PF00005 ABC transporter H9K48_RS08135 PF08402 TOBE domain H9K48_RS08140 PF12804 MobA-like NTP transferase domain H9K48_RS08145 PF00994 Probable molybdopterin binding domain H9K48_RS08145 PF03453 MoeA N-terminal region (domain I and II) H9K48_RS08145 PF03454 MoeA C-terminal region (domain IV) H9K48_RS08155 PF00480 ROK family H9K48_RS08160 PF03942 DTW domain H9K48_RS08195 PF17202 Single cache domain 3 H9K48_RS08195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS08195 PF00672 HAMP domain H9K48_RS08200 PF00877 NlpC/P60 family H9K48_RS08210 PF05230 MASE2 domain H9K48_RS08210 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS08215 PF00072 Response regulator receiver domain H9K48_RS08215 PF01339 CheB methylesterase H9K48_RS08220 PF03881 Fructosamine kinase H9K48_RS08230 PF00677 Lumazine binding domain H9K48_RS08235 PF01554 MatE H9K48_RS08245 PF01068 ATP dependent DNA ligase domain H9K48_RS08245 PF14743 DNA ligase OB-like domain H9K48_RS08250 PF01740 STAS domain H9K48_RS08260 PF10531 SLBB domain H9K48_RS08260 PF02563 Polysaccharide biosynthesis/export protein H9K48_RS08275 PF00158 Sigma-54 interaction domain H9K48_RS08275 PF02954 Bacterial regulatory protein, Fis family H9K48_RS08275 PF00072 Response regulator receiver domain H9K48_RS08280 PF13439 Glycosyltransferase Family 4 H9K48_RS08280 PF00534 Glycosyl transferases group 1 H9K48_RS08285 PF00534 Glycosyl transferases group 1 H9K48_RS08285 PF13439 Glycosyltransferase Family 4 H9K48_RS08315 PF13439 Glycosyltransferase Family 4 H9K48_RS08315 PF00534 Glycosyl transferases group 1 H9K48_RS08320 PF00535 Glycosyl transferase family 2 H9K48_RS08325 PF02397 Bacterial sugar transferase H9K48_RS08335 PF02028 BCCT, betaine/carnitine/choline family transporter H9K48_RS08350 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H9K48_RS08350 PF00270 DEAD/DEAH box helicase H9K48_RS08350 PF11898 Domain of unknown function (DUF3418) H9K48_RS08350 PF04408 Helicase associated domain (HA2) H9K48_RS08350 PF00271 Helicase conserved C-terminal domain H9K48_RS08355 PF02525 Flavodoxin-like fold H9K48_RS08365 PF02613 Nitrate reductase delta subunit H9K48_RS08370 PF04976 DMSO reductase anchor subunit (DmsC) H9K48_RS08375 PF13247 4Fe-4S dicluster domain H9K48_RS08375 PF12800 4Fe-4S binding domain H9K48_RS08380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K48_RS08380 PF00384 Molybdopterin oxidoreductase H9K48_RS08380 PF01568 Molydopterin dinucleotide binding domain H9K48_RS08410 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS08410 PF17151 Periplasmic sensor domain H9K48_RS08420 PF00012 Hsp70 protein H9K48_RS08425 PF00012 Hsp70 protein H9K48_RS08450 PF00005 ABC transporter H9K48_RS08450 PF00664 ABC transporter transmembrane region H9K48_RS08455 PF00005 ABC transporter H9K48_RS08455 PF00664 ABC transporter transmembrane region H9K48_RS08475 PF03222 Tryptophan/tyrosine permease family H9K48_RS08480 PF00465 Iron-containing alcohol dehydrogenase H9K48_RS08485 PF01966 HD domain H9K48_RS08540 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H9K48_RS08570 PF01037 Lrp/AsnC ligand binding domain H9K48_RS08580 PF05947 Type VI secretion system, TssF H9K48_RS08590 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9K48_RS08605 PF00069 Protein kinase domain H9K48_RS08630 PF04717 Type VI secretion system, phage-baseplate injector H9K48_RS08635 PF05638 Type VI secretion system effector, Hcp H9K48_RS08640 PF00004 ATPase family associated with various cellular activities (AAA) H9K48_RS08640 PF07724 AAA domain (Cdc48 subfamily) H9K48_RS08640 PF17871 AAA lid domain H9K48_RS08640 PF10431 C-terminal, D2-small domain, of ClpB protein H9K48_RS08645 PF00072 Response regulator receiver domain H9K48_RS08645 PF00158 Sigma-54 interaction domain H9K48_RS08645 PF02954 Bacterial regulatory protein, Fis family H9K48_RS08650 PF00691 OmpA family H9K48_RS08670 PF01476 LysM domain H9K48_RS08670 PF01551 Peptidase family M23 H9K48_RS08670 PF08525 Opacity-associated protein A N-terminal motif H9K48_RS08675 PF03741 Integral membrane protein TerC family H9K48_RS08685 PF04055 Radical SAM superfamily H9K48_RS08690 PF11230 Protein of unknown function (DUF3029) H9K48_RS08695 PF01810 LysE type translocator H9K48_RS08700 PF11871 Domain of unknown function (DUF3391) H9K48_RS08700 PF01966 HD domain H9K48_RS08705 PF00563 EAL domain H9K48_RS08705 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS08705 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS08710 PF00158 Sigma-54 interaction domain H9K48_RS08710 PF02954 Bacterial regulatory protein, Fis family H9K48_RS08710 PF00072 Response regulator receiver domain H9K48_RS08715 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS08715 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS08720 PF00939 Sodium:sulfate symporter transmembrane region H9K48_RS08735 PF00300 Histidine phosphatase superfamily (branch 1) H9K48_RS08755 PF03466 LysR substrate binding domain H9K48_RS08755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS08760 PF08543 Phosphomethylpyrimidine kinase H9K48_RS08775 PF13533 Biotin-lipoyl like H9K48_RS08820 PF14497 Glutathione S-transferase, C-terminal domain H9K48_RS08820 PF02798 Glutathione S-transferase, N-terminal domain H9K48_RS08830 PF04209 homogentisate 1,2-dioxygenase H9K48_RS08835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS08840 PF07687 Peptidase dimerisation domain H9K48_RS08840 PF01546 Peptidase family M20/M25/M40 H9K48_RS08845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS08850 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS08855 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS08855 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K48_RS08860 PF00005 ABC transporter H9K48_RS08860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS08865 PF00005 ABC transporter H9K48_RS08865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS08875 PF01752 Collagenase H9K48_RS08875 PF08453 Peptidase family M9 N-terminal H9K48_RS08885 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS08895 PF08402 TOBE domain H9K48_RS08895 PF00005 ABC transporter H9K48_RS08900 PF00701 Dihydrodipicolinate synthetase family H9K48_RS08905 PF02423 Ornithine cyclodeaminase/mu-crystallin family H9K48_RS08920 PF05544 Proline racemase H9K48_RS08925 PF00171 Aldehyde dehydrogenase family H9K48_RS08930 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS08950 PF05971 RNA methyltransferase H9K48_RS08955 PF01863 Protein of unknown function DUF45 H9K48_RS08965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS08965 PF03466 LysR substrate binding domain H9K48_RS08985 PF00005 ABC transporter H9K48_RS08990 PF01032 FecCD transport family H9K48_RS08995 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H9K48_RS09005 PF00300 Histidine phosphatase superfamily (branch 1) H9K48_RS09010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H9K48_RS09015 PF02654 Cobalamin-5-phosphate synthase H9K48_RS09020 PF02277 Phosphoribosyltransferase H9K48_RS09030 PF00375 Sodium:dicarboxylate symporter family H9K48_RS09035 PF08411 Exonuclease C-terminal H9K48_RS09035 PF00929 Exonuclease H9K48_RS09040 PF03788 LrgA family H9K48_RS09045 PF04172 LrgB-like family H9K48_RS09050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K48_RS09050 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region H9K48_RS09055 PF02222 ATP-grasp domain H9K48_RS09060 PF05724 Thiopurine S-methyltransferase (TPMT) H9K48_RS09070 PF00216 Bacterial DNA-binding protein H9K48_RS09080 PF01588 Putative tRNA binding domain H9K48_RS09080 PF03484 tRNA synthetase B5 domain H9K48_RS09080 PF03483 B3/4 domain H9K48_RS09080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H9K48_RS09080 PF03147 Ferredoxin-fold anticodon binding domain H9K48_RS09085 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H9K48_RS09085 PF01409 tRNA synthetases class II core domain (F) H9K48_RS09090 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS09090 PF17158 Membrane-associated sensor, integral membrane domain H9K48_RS09120 PF01906 Putative heavy-metal-binding H9K48_RS09125 PF00453 Ribosomal protein L20 H9K48_RS09130 PF01632 Ribosomal protein L35 H9K48_RS09135 PF05198 Translation initiation factor IF-3, N-terminal domain H9K48_RS09135 PF00707 Translation initiation factor IF-3, C-terminal domain H9K48_RS09140 PF02824 TGS domain H9K48_RS09140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K48_RS09140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9K48_RS09140 PF03129 Anticodon binding domain H9K48_RS09155 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS09155 PF07702 UTRA domain H9K48_RS09160 PF01979 Amidohydrolase family H9K48_RS09165 PF00491 Arginase family H9K48_RS09170 PF01175 Urocanase Rossmann-like domain H9K48_RS09170 PF17392 Urocanase C-terminal domain H9K48_RS09170 PF17391 Urocanase N-terminal domain H9K48_RS09175 PF00221 Aromatic amino acid lyase H9K48_RS09185 PF04191 Phospholipid methyltransferase H9K48_RS09190 PF13183 4Fe-4S dicluster domain H9K48_RS09190 PF02913 FAD linked oxidases, C-terminal domain H9K48_RS09190 PF01565 FAD binding domain H9K48_RS09205 PF00691 OmpA family H9K48_RS09205 PF05736 OprF membrane domain H9K48_RS09225 PF01259 SAICAR synthetase H9K48_RS09230 PF09423 PhoD-like phosphatase H9K48_RS09230 PF16655 PhoD-like phosphatase, N-terminal domain H9K48_RS09240 PF02253 Phospholipase A1 H9K48_RS09245 PF00270 DEAD/DEAH box helicase H9K48_RS09245 PF04408 Helicase associated domain (HA2) H9K48_RS09245 PF00271 Helicase conserved C-terminal domain H9K48_RS09245 PF08482 ATP-dependent helicase C-terminal H9K48_RS09250 PF03949 Malic enzyme, NAD binding domain H9K48_RS09250 PF00390 Malic enzyme, N-terminal domain H9K48_RS09255 PF02698 DUF218 domain H9K48_RS09260 PF00939 Sodium:sulfate symporter transmembrane region H9K48_RS09265 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS09265 PF00072 Response regulator receiver domain H9K48_RS09275 PF00266 Aminotransferase class-V H9K48_RS09285 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS09290 PF00664 ABC transporter transmembrane region H9K48_RS09290 PF00005 ABC transporter H9K48_RS09295 PF00664 ABC transporter transmembrane region H9K48_RS09295 PF00005 ABC transporter H9K48_RS09300 PF00291 Pyridoxal-phosphate dependent enzyme H9K48_RS09305 PF00266 Aminotransferase class-V H9K48_RS09315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS09315 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS09315 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS09330 PF04994 TfoX C-terminal domain H9K48_RS09330 PF04993 TfoX N-terminal domain H9K48_RS09340 PF03956 Lysine exporter LysO H9K48_RS09350 PF00282 Pyridoxal-dependent decarboxylase conserved domain H9K48_RS09355 PF01380 SIS domain H9K48_RS09355 PF01418 Helix-turn-helix domain, rpiR family H9K48_RS09360 PF00465 Iron-containing alcohol dehydrogenase H9K48_RS09365 PF00462 Glutaredoxin H9K48_RS09370 PF06826 Predicted Permease Membrane Region H9K48_RS09370 PF02080 TrkA-C domain H9K48_RS09375 PF07055 Enoyl reductase FAD binding domain H9K48_RS09375 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9K48_RS09375 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9K48_RS09380 PF09317 Domain of unknown function (DUF1974) H9K48_RS09380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K48_RS09380 PF02770 Acyl-CoA dehydrogenase, middle domain H9K48_RS09380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K48_RS09385 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS09385 PF16295 Tetracyclin repressor-like, C-terminal domain H9K48_RS09390 PF06965 Na+/H+ antiporter 1 H9K48_RS09405 PF00005 ABC transporter H9K48_RS09410 PF01554 MatE H9K48_RS09415 PF13460 NAD(P)H-binding H9K48_RS09415 PF11066 Protein of unknown function (DUF2867) H9K48_RS09420 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K48_RS09435 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) H9K48_RS09450 PF07690 Major Facilitator Superfamily H9K48_RS09455 PF00849 RNA pseudouridylate synthase H9K48_RS09455 PF01479 S4 domain H9K48_RS09460 PF04851 Type III restriction enzyme, res subunit H9K48_RS09460 PF00271 Helicase conserved C-terminal domain H9K48_RS09470 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS09470 PF00072 Response regulator receiver domain H9K48_RS09475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS09480 PF01386 Ribosomal L25p family H9K48_RS09495 PF02872 5'-nucleotidase, C-terminal domain H9K48_RS09495 PF00149 Calcineurin-like phosphoesterase H9K48_RS09505 PF06945 Protein of unknown function (DUF1289) H9K48_RS09515 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS09515 PF00072 Response regulator receiver domain H9K48_RS09520 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS09530 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS09530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K48_RS09540 PF09335 SNARE associated Golgi protein H9K48_RS09545 PF13416 Bacterial extracellular solute-binding protein H9K48_RS09550 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS09555 PF00005 ABC transporter H9K48_RS09560 PF01066 CDP-alcohol phosphatidyltransferase H9K48_RS09570 PF00158 Sigma-54 interaction domain H9K48_RS09570 PF01590 GAF domain H9K48_RS09575 PF03063 Prismane/CO dehydrogenase family H9K48_RS09580 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K48_RS09580 PF00175 Oxidoreductase NAD-binding domain H9K48_RS09580 PF00970 Oxidoreductase FAD-binding domain H9K48_RS09590 PF00849 RNA pseudouridylate synthase H9K48_RS09595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS09595 PF00672 HAMP domain H9K48_RS09595 PF12729 Four helix bundle sensory module for signal transduction H9K48_RS09600 PF00209 Sodium:neurotransmitter symporter family H9K48_RS09605 PF13091 PLD-like domain H9K48_RS09605 PF13396 Phospholipase_D-nuclease N-terminal H9K48_RS09610 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K48_RS09615 PF00561 alpha/beta hydrolase fold H9K48_RS09620 PF03280 Proteobacterial lipase chaperone protein H9K48_RS09625 PF03352 Methyladenine glycosylase H9K48_RS09630 PF00873 AcrB/AcrD/AcrF family H9K48_RS09640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS09645 PF04024 PspC domain H9K48_RS09650 PF06667 Phage shock protein B H9K48_RS09655 PF04012 PspA/IM30 family H9K48_RS09660 PF02954 Bacterial regulatory protein, Fis family H9K48_RS09660 PF00158 Sigma-54 interaction domain H9K48_RS09665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS09670 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS09675 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K48_RS09675 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS09680 PF00005 ABC transporter H9K48_RS09680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS09685 PF00005 ABC transporter H9K48_RS09695 PF02833 DHHA2 domain H9K48_RS09695 PF01368 DHH family H9K48_RS09705 PF16874 Glycosyl hydrolase family 36 C-terminal domain H9K48_RS09705 PF16875 Glycosyl hydrolase family 36 N-terminal domain H9K48_RS09710 PF00384 Molybdopterin oxidoreductase H9K48_RS09710 PF01568 Molydopterin dinucleotide binding domain H9K48_RS09710 PF18364 Molybdopterin oxidoreductase N-terminal domain H9K48_RS09715 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K48_RS09720 PF06796 Periplasmic nitrate reductase protein NapE H9K48_RS09725 PF03649 Uncharacterised protein family (UPF0014) H9K48_RS09735 PF01226 Formate/nitrite transporter H9K48_RS09760 PF02698 DUF218 domain H9K48_RS09765 PF00265 Thymidine kinase H9K48_RS09770 PF01406 tRNA synthetases class I (C) catalytic domain H9K48_RS09770 PF09190 DALR domain H9K48_RS09775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K48_RS09780 PF00149 Calcineurin-like phosphoesterase H9K48_RS09785 PF00563 EAL domain H9K48_RS09785 PF08668 HDOD domain H9K48_RS09790 PF02810 SEC-C motif H9K48_RS09795 PF01502 Phosphoribosyl-AMP cyclohydrolase H9K48_RS09795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H9K48_RS09800 PF00977 Histidine biosynthesis protein H9K48_RS09805 PF00977 Histidine biosynthesis protein H9K48_RS09810 PF00117 Glutamine amidotransferase class-I H9K48_RS09815 PF08645 Polynucleotide kinase 3 phosphatase H9K48_RS09815 PF00475 Imidazoleglycerol-phosphate dehydratase H9K48_RS09820 PF00155 Aminotransferase class I and II H9K48_RS09825 PF00815 Histidinol dehydrogenase H9K48_RS09830 PF01634 ATP phosphoribosyltransferase H9K48_RS09830 PF08029 HisG, C-terminal domain H9K48_RS09835 PF00158 Sigma-54 interaction domain H9K48_RS09835 PF00072 Response regulator receiver domain H9K48_RS09835 PF02954 Bacterial regulatory protein, Fis family H9K48_RS09845 PF03553 Na+/H+ antiporter family H9K48_RS09850 PF00816 H-NS histone family H9K48_RS09855 PF00294 pfkB family carbohydrate kinase H9K48_RS09870 PF04356 Protein of unknown function (DUF489) H9K48_RS09875 PF08328 Adenylosuccinate lyase C-terminal H9K48_RS09875 PF00206 Lyase H9K48_RS09910 PF00106 short chain dehydrogenase H9K48_RS09920 PF01435 Peptidase family M48 H9K48_RS09935 PF08241 Methyltransferase domain H9K48_RS09940 PF00155 Aminotransferase class I and II H9K48_RS09945 PF06968 Biotin and Thiamin Synthesis associated domain H9K48_RS09945 PF04055 Radical SAM superfamily H9K48_RS09950 PF00202 Aminotransferase class-III H9K48_RS09955 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9K48_RS09960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9K48_RS09960 PF02403 Seryl-tRNA synthetase N-terminal domain H9K48_RS09965 PF00004 ATPase family associated with various cellular activities (AAA) H9K48_RS09965 PF12002 MgsA AAA+ ATPase C terminal H9K48_RS09965 PF16193 AAA C-terminal domain H9K48_RS09970 PF03548 Outer membrane lipoprotein carrier protein LolA H9K48_RS09975 PF09397 Ftsk gamma domain H9K48_RS09975 PF01580 FtsK/SpoIIIE family H9K48_RS09975 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H9K48_RS09975 PF17854 FtsK alpha domain H9K48_RS09980 PF01037 Lrp/AsnC ligand binding domain H9K48_RS09985 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9K48_RS09985 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9K48_RS09995 PF03466 LysR substrate binding domain H9K48_RS09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS10005 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H9K48_RS10010 PF03372 Endonuclease/Exonuclease/phosphatase family H9K48_RS10020 PF00579 tRNA synthetases class I (W and Y) H9K48_RS10035 PF00873 AcrB/AcrD/AcrF family H9K48_RS10040 PF00529 HlyD membrane-fusion protein of T1SS H9K48_RS10040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS10045 PF00672 HAMP domain H9K48_RS10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS10045 PF12729 Four helix bundle sensory module for signal transduction H9K48_RS10055 PF06610 L-alanine exporter H9K48_RS10060 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS10060 PF09308 LuxQ, periplasmic H9K48_RS10060 PF00072 Response regulator receiver domain H9K48_RS10070 PF03738 Glutathionylspermidine synthase preATP-grasp H9K48_RS10080 PF03994 Domain of Unknown Function (DUF350) H9K48_RS10090 PF02445 Quinolinate synthetase A protein H9K48_RS10095 PF13174 Tetratricopeptide repeat H9K48_RS10095 PF16331 TolA binding protein trimerisation H9K48_RS10100 PF00691 OmpA family H9K48_RS10105 PF04052 TolB amino-terminal domain H9K48_RS10105 PF07676 WD40-like Beta Propeller Repeat H9K48_RS10115 PF02472 Biopolymer transport protein ExbD/TolR H9K48_RS10120 PF01618 MotA/TolQ/ExbB proton channel family H9K48_RS10125 PF03061 Thioesterase superfamily H9K48_RS10135 PF08173 Membrane bound YbgT-like protein H9K48_RS10140 PF02322 Cytochrome bd terminal oxidase subunit II H9K48_RS10145 PF01654 Cytochrome bd terminal oxidase subunit I H9K48_RS10150 PF05496 Holliday junction DNA helicase RuvB P-loop domain H9K48_RS10150 PF05491 RuvB C-terminal winged helix domain H9K48_RS10150 PF17864 RuvB AAA lid domain H9K48_RS10155 PF07499 RuvA, C-terminal domain H9K48_RS10155 PF01330 RuvA N terminal domain H9K48_RS10160 PF00672 HAMP domain H9K48_RS10160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS10160 PF02203 Tar ligand binding domain homologue H9K48_RS10165 PF02075 Crossover junction endodeoxyribonuclease RuvC H9K48_RS10170 PF00152 tRNA synthetases class II (D, K and N) H9K48_RS10170 PF01336 OB-fold nucleic acid binding domain H9K48_RS10170 PF02938 GAD domain H9K48_RS10175 PF01904 Protein of unknown function DUF72 H9K48_RS10180 PF13649 Methyltransferase domain H9K48_RS10185 PF08003 Protein of unknown function (DUF1698) H9K48_RS10190 PF08443 RimK-like ATP-grasp domain H9K48_RS10190 PF18030 RimK PreATP-grasp domain H9K48_RS10200 PF08443 RimK-like ATP-grasp domain H9K48_RS10200 PF18030 RimK PreATP-grasp domain H9K48_RS10210 PF04310 MukB N-terminal H9K48_RS10210 PF16330 MukB hinge domain H9K48_RS10215 PF04288 MukE-like family H9K48_RS10220 PF17192 MukF middle domain H9K48_RS10220 PF17193 MukF C-terminal domain H9K48_RS10220 PF03882 MukF winged-helix domain H9K48_RS10225 PF13847 Methyltransferase domain H9K48_RS10230 PF02698 DUF218 domain H9K48_RS10235 PF00072 Response regulator receiver domain H9K48_RS10235 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS10240 PF02613 Nitrate reductase delta subunit H9K48_RS10245 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS10250 PF04993 TfoX N-terminal domain H9K48_RS10250 PF04994 TfoX C-terminal domain H9K48_RS10270 PF08323 Starch synthase catalytic domain H9K48_RS10270 PF00534 Glycosyl transferases group 1 H9K48_RS10275 PF00483 Nucleotidyl transferase H9K48_RS10280 PF08272 Topoisomerase I zinc-ribbon-like H9K48_RS10280 PF01131 DNA topoisomerase H9K48_RS10280 PF01751 Toprim domain H9K48_RS10280 PF01396 Topoisomerase DNA binding C4 zinc finger H9K48_RS10285 PF10692 Protein of unknown function (DUF2498) H9K48_RS10290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9K48_RS10300 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H9K48_RS10305 PF04377 Arginine-tRNA-protein transferase, C terminus H9K48_RS10305 PF04376 Arginine-tRNA-protein transferase, N terminus H9K48_RS10310 PF01176 Translation initiation factor 1A / IF-1 H9K48_RS10320 PF10431 C-terminal, D2-small domain, of ClpB protein H9K48_RS10320 PF02861 Clp amino terminal domain, pathogenicity island component H9K48_RS10320 PF17871 AAA lid domain H9K48_RS10320 PF07724 AAA domain (Cdc48 subfamily) H9K48_RS10320 PF00004 ATPase family associated with various cellular activities (AAA) H9K48_RS10325 PF02617 ATP-dependent Clp protease adaptor protein ClpS H9K48_RS10330 PF00313 'Cold-shock' DNA-binding domain H9K48_RS10335 PF03971 Monomeric isocitrate dehydrogenase H9K48_RS10340 PF00849 RNA pseudouridylate synthase H9K48_RS10345 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K48_RS10355 PF06733 DEAD_2 H9K48_RS10355 PF13307 Helicase C-terminal domain H9K48_RS10360 PF01925 Sulfite exporter TauE/SafE H9K48_RS10365 PF07445 Primosomal replication protein priC H9K48_RS10370 PF10689 Protein of unknown function (DUF2496) H9K48_RS10375 PF03372 Endonuclease/Exonuclease/phosphatase family H9K48_RS10385 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS10390 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS10395 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS10400 PF00005 ABC transporter H9K48_RS10415 PF01228 Glycine radical H9K48_RS10415 PF02901 Pyruvate formate lyase-like H9K48_RS10425 PF04055 Radical SAM superfamily H9K48_RS10435 PF03887 YfbU domain H9K48_RS10440 PF06798 PrkA serine protein kinase C-terminal domain H9K48_RS10440 PF08298 PrkA AAA domain H9K48_RS10445 PF04285 Protein of unknown function (DUF444) H9K48_RS10450 PF04293 SpoVR like protein H9K48_RS10455 PF02348 Cytidylyltransferase H9K48_RS10460 PF03966 Trm112p-like protein H9K48_RS10465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H9K48_RS10470 PF00664 ABC transporter transmembrane region H9K48_RS10470 PF00005 ABC transporter H9K48_RS10475 PF13567 Domain of unknown function (DUF4131) H9K48_RS10475 PF03772 Competence protein H9K48_RS10475 PF00753 Metallo-beta-lactamase superfamily H9K48_RS10485 PF12704 MacB-like periplasmic core domain H9K48_RS10485 PF02687 FtsX-like permease family H9K48_RS10490 PF00005 ABC transporter H9K48_RS10495 PF12704 MacB-like periplasmic core domain H9K48_RS10495 PF02687 FtsX-like permease family H9K48_RS10505 PF02559 CarD-like/TRCF domain H9K48_RS10505 PF00270 DEAD/DEAH box helicase H9K48_RS10505 PF00271 Helicase conserved C-terminal domain H9K48_RS10505 PF03461 TRCF domain H9K48_RS10505 PF17757 UvrB interaction domain H9K48_RS10520 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS10525 PF05728 Uncharacterised protein family (UPF0227) H9K48_RS10535 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9K48_RS10535 PF13036 Peptidoglycan-synthase activator LpoB H9K48_RS10550 PF01230 HIT domain H9K48_RS10555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS10555 PF00672 HAMP domain H9K48_RS10565 PF01048 Phosphorylase superfamily H9K48_RS10570 PF00403 Heavy-metal-associated domain H9K48_RS10575 PF00571 CBS domain H9K48_RS10575 PF00478 IMP dehydrogenase / GMP reductase domain H9K48_RS10585 PF11953 Domain of unknown function (DUF3470) H9K48_RS10585 PF00037 4Fe-4S binding domain H9K48_RS10590 PF00588 SpoU rRNA Methylase family H9K48_RS10590 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9K48_RS10650 PF00350 Dynamin family H9K48_RS10675 PF17152 Periplasmic sensor domain H9K48_RS10675 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS10685 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9K48_RS10690 PF09619 Type III secretion system lipoprotein chaperone (YscW) H9K48_RS10705 PF13404 AsnC-type helix-turn-helix domain H9K48_RS10705 PF01037 Lrp/AsnC ligand binding domain H9K48_RS10710 PF00291 Pyridoxal-phosphate dependent enzyme H9K48_RS10730 PF00873 AcrB/AcrD/AcrF family H9K48_RS10735 PF13533 Biotin-lipoyl like H9K48_RS10780 PF07690 Major Facilitator Superfamily H9K48_RS10785 PF03601 Conserved hypothetical protein 698 H9K48_RS10795 PF13193 AMP-binding enzyme C-terminal domain H9K48_RS10795 PF00501 AMP-binding enzyme H9K48_RS10800 PF13378 Enolase C-terminal domain-like H9K48_RS10805 PF00378 Enoyl-CoA hydratase/isomerase H9K48_RS10810 PF12697 Alpha/beta hydrolase family H9K48_RS10815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9K48_RS10815 PF16582 Middle domain of thiamine pyrophosphate H9K48_RS10815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9K48_RS10820 PF00425 chorismate binding enzyme H9K48_RS10825 PF00155 Aminotransferase class I and II H9K48_RS10835 PF13286 Phosphohydrolase-associated domain H9K48_RS10835 PF01966 HD domain H9K48_RS10855 PF13145 PPIC-type PPIASE domain H9K48_RS10860 PF00216 Bacterial DNA-binding protein H9K48_RS10865 PF00004 ATPase family associated with various cellular activities (AAA) H9K48_RS10865 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K48_RS10865 PF02190 ATP-dependent protease La (LON) substrate-binding domain H9K48_RS10870 PF07724 AAA domain (Cdc48 subfamily) H9K48_RS10870 PF10431 C-terminal, D2-small domain, of ClpB protein H9K48_RS10870 PF06689 ClpX C4-type zinc finger H9K48_RS10875 PF00574 Clp protease H9K48_RS10880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K48_RS10880 PF05698 Bacterial trigger factor protein (TF) C-terminus H9K48_RS10880 PF05697 Bacterial trigger factor protein (TF) H9K48_RS10890 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS10890 PF02743 Cache domain H9K48_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS10895 PF00158 Sigma-54 interaction domain H9K48_RS10895 PF02954 Bacterial regulatory protein, Fis family H9K48_RS10895 PF00072 Response regulator receiver domain H9K48_RS10905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K48_RS10910 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9K48_RS10915 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K48_RS10920 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H9K48_RS10935 PF02386 Cation transport protein H9K48_RS10940 PF02080 TrkA-C domain H9K48_RS10940 PF02254 TrkA-N domain H9K48_RS10945 PF00270 DEAD/DEAH box helicase H9K48_RS10945 PF00271 Helicase conserved C-terminal domain H9K48_RS10950 PF01595 Cyclin M transmembrane N-terminal domain H9K48_RS10950 PF03471 Transporter associated domain H9K48_RS10950 PF00571 CBS domain H9K48_RS10960 PF04820 Tryptophan halogenase H9K48_RS10985 PF00550 Phosphopantetheine attachment site H9K48_RS10990 PF00550 Phosphopantetheine attachment site H9K48_RS11005 PF07977 FabA-like domain H9K48_RS11010 PF00535 Glycosyl transferase family 2 H9K48_RS11015 PF00221 Aromatic amino acid lyase H9K48_RS11040 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K48_RS11040 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K48_RS11045 PF07977 FabA-like domain H9K48_RS11055 PF02801 Beta-ketoacyl synthase, C-terminal domain H9K48_RS11055 PF00109 Beta-ketoacyl synthase, N-terminal domain H9K48_RS11095 PF10137 Predicted nucleotide-binding protein containing TIR-like domain H9K48_RS11135 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H9K48_RS11135 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H9K48_RS11140 PF07670 Nucleoside recognition H9K48_RS11140 PF07662 Na+ dependent nucleoside transporter C-terminus H9K48_RS11140 PF01773 Na+ dependent nucleoside transporter N-terminus H9K48_RS11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS11145 PF03466 LysR substrate binding domain H9K48_RS11150 PF13406 Transglycosylase SLT domain H9K48_RS11155 PF05166 YcgL domain H9K48_RS11160 PF05209 Septum formation inhibitor MinC, N-terminal domain H9K48_RS11160 PF03775 Septum formation inhibitor MinC, C-terminal domain H9K48_RS11165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H9K48_RS11170 PF03776 Septum formation topological specificity factor MinE H9K48_RS11175 PF01612 3'-5' exonuclease H9K48_RS11175 PF00570 HRDC domain H9K48_RS11180 PF13193 AMP-binding enzyme C-terminal domain H9K48_RS11180 PF00501 AMP-binding enzyme H9K48_RS11185 PF00561 alpha/beta hydrolase fold H9K48_RS11200 PF00814 Glycoprotease family H9K48_RS11205 PF04851 Type III restriction enzyme, res subunit H9K48_RS11205 PF13307 Helicase C-terminal domain H9K48_RS11210 PF00551 Formyl transferase H9K48_RS11210 PF01842 ACT domain H9K48_RS11215 PF06185 YecM protein H9K48_RS11220 PF05746 DALR anticodon binding domain H9K48_RS11220 PF03485 Arginyl tRNA synthetase N terminal domain H9K48_RS11220 PF00750 tRNA synthetases class I (R) H9K48_RS11235 PF07664 Ferrous iron transport protein B C terminus H9K48_RS11235 PF17910 FeoB cytosolic helical domain H9K48_RS11235 PF07670 Nucleoside recognition H9K48_RS11235 PF02421 Ferrous iron transport protein B H9K48_RS11240 PF04023 FeoA domain H9K48_RS11245 PF12833 Helix-turn-helix domain H9K48_RS11245 PF02311 AraC-like ligand binding domain H9K48_RS11250 PF01297 Zinc-uptake complex component A periplasmic H9K48_RS11255 PF00005 ABC transporter H9K48_RS11260 PF00950 ABC 3 transport family H9K48_RS11265 PF00549 CoA-ligase H9K48_RS11265 PF02629 CoA binding domain H9K48_RS11270 PF08442 ATP-grasp domain H9K48_RS11270 PF00549 CoA-ligase H9K48_RS11275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K48_RS11275 PF00364 Biotin-requiring enzyme H9K48_RS11275 PF02817 e3 binding domain H9K48_RS11280 PF02779 Transketolase, pyrimidine binding domain H9K48_RS11280 PF16870 2-oxoglutarate dehydrogenase C-terminal H9K48_RS11280 PF00676 Dehydrogenase E1 component H9K48_RS11280 PF16078 2-oxoglutarate dehydrogenase N-terminus H9K48_RS11285 PF13085 2Fe-2S iron-sulfur cluster binding domain H9K48_RS11290 PF02910 Fumarate reductase flavoprotein C-term H9K48_RS11290 PF00890 FAD binding domain H9K48_RS11295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9K48_RS11300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9K48_RS11305 PF00285 Citrate synthase, C-terminal domain H9K48_RS11310 PF01784 NIF3 (NGG1p interacting factor 3) H9K48_RS11320 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K48_RS11320 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K48_RS11320 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K48_RS11320 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K48_RS11325 PF03925 SeqA protein C-terminal domain H9K48_RS11325 PF17206 SeqA protein N-terminal domain H9K48_RS11330 PF12697 Alpha/beta hydrolase family H9K48_RS11340 PF00258 Flavodoxin H9K48_RS11350 PF01475 Ferric uptake regulator family H9K48_RS11355 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K48_RS11355 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H9K48_RS11360 PF00367 phosphotransferase system, EIIB H9K48_RS11360 PF02378 Phosphotransferase system, EIIC H9K48_RS11365 PF01979 Amidohydrolase family H9K48_RS11370 PF00480 ROK family H9K48_RS11370 PF01047 MarR family H9K48_RS11375 PF00999 Sodium/hydrogen exchanger family H9K48_RS11375 PF02254 TrkA-N domain H9K48_RS11380 PF00733 Asparagine synthase H9K48_RS11380 PF13537 Glutamine amidotransferase domain H9K48_RS11385 PF02357 Transcription termination factor nusG H9K48_RS11390 PF00854 POT family H9K48_RS11395 PF00762 Ferrochelatase H9K48_RS11400 PF05191 Adenylate kinase, active site lid H9K48_RS11405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS11405 PF00183 Hsp90 protein H9K48_RS11410 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS11415 PF17323 Trans-membrane regulatory protein ToxS H9K48_RS11430 PF12850 Calcineurin-like phosphoesterase superfamily domain H9K48_RS11450 PF07556 Protein of unknown function (DUF1538) H9K48_RS11455 PF07556 Protein of unknown function (DUF1538) H9K48_RS11460 PF08338 Domain of unknown function (DUF1731) H9K48_RS11460 PF01370 NAD dependent epimerase/dehydratase family H9K48_RS11465 PF00106 short chain dehydrogenase H9K48_RS11470 PF00085 Thioredoxin H9K48_RS11475 PF01145 SPFH domain / Band 7 family H9K48_RS11475 PF16200 C-terminal region of band_7 H9K48_RS11490 PF03573 outer membrane porin, OprD family H9K48_RS11495 PF03120 NAD-dependent DNA ligase OB-fold domain H9K48_RS11495 PF00533 BRCA1 C Terminus (BRCT) domain H9K48_RS11495 PF01653 NAD-dependent DNA ligase adenylation domain H9K48_RS11495 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H9K48_RS11495 PF12826 Helix-hairpin-helix motif H9K48_RS11500 PF04354 ZipA, C-terminal FtsZ-binding domain H9K48_RS11510 PF00291 Pyridoxal-phosphate dependent enzyme H9K48_RS11515 PF00381 PTS HPr component phosphorylation site H9K48_RS11520 PF00391 PEP-utilising enzyme, mobile domain H9K48_RS11520 PF05524 PEP-utilising enzyme, N-terminal H9K48_RS11520 PF02896 PEP-utilising enzyme, TIM barrel domain H9K48_RS11525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H9K48_RS11530 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS11530 PF07196 Flagellin hook IN motif H9K48_RS11530 PF00700 Bacterial flagellin C-terminal helical region H9K48_RS11535 PF07196 Flagellin hook IN motif H9K48_RS11535 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS11535 PF00700 Bacterial flagellin C-terminal helical region H9K48_RS11540 PF00700 Bacterial flagellin C-terminal helical region H9K48_RS11540 PF07196 Flagellin hook IN motif H9K48_RS11540 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS11545 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS11550 PF07196 Flagellin hook IN motif H9K48_RS11550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS11555 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9K48_RS11555 PF10135 Rod binding protein H9K48_RS11560 PF02119 Flagellar P-ring protein H9K48_RS11565 PF02107 Flagellar L-ring protein H9K48_RS11570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS11570 PF00460 Flagella basal body rod protein H9K48_RS11575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS11575 PF00460 Flagella basal body rod protein H9K48_RS11580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS11580 PF00460 Flagella basal body rod protein H9K48_RS11580 PF07559 Flagellar basal body protein FlaE H9K48_RS11585 PF03963 Flagellar hook capping protein - N-terminal region H9K48_RS11585 PF13860 FlgD Ig-like domain H9K48_RS11585 PF13861 FlgD Tudor-like domain H9K48_RS11590 PF00460 Flagella basal body rod protein H9K48_RS11590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS11595 PF00460 Flagella basal body rod protein H9K48_RS11600 PF01739 CheR methyltransferase, SAM binding domain H9K48_RS11600 PF03705 CheR methyltransferase, all-alpha domain H9K48_RS11605 PF01584 CheW-like domain H9K48_RS11605 PF00072 Response regulator receiver domain H9K48_RS11650 PF01389 OmpA-like transmembrane domain H9K48_RS11650 PF00691 OmpA family H9K48_RS11655 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9K48_RS11660 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K48_RS11665 PF13609 Gram-negative porin H9K48_RS11670 PF00403 Heavy-metal-associated domain H9K48_RS11685 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain H9K48_RS11685 PF02838 Glycosyl hydrolase family 20, domain 2 H9K48_RS11685 PF00728 Glycosyl hydrolase family 20, catalytic domain H9K48_RS11685 PF03173 Putative carbohydrate binding domain H9K48_RS11705 PF01713 Smr domain H9K48_RS11710 PF00849 RNA pseudouridylate synthase H9K48_RS11710 PF01479 S4 domain H9K48_RS11715 PF04073 Aminoacyl-tRNA editing domain H9K48_RS11720 PF02872 5'-nucleotidase, C-terminal domain H9K48_RS11720 PF00149 Calcineurin-like phosphoesterase H9K48_RS11725 PF00793 DAHP synthetase I family H9K48_RS11730 PF13369 Transglutaminase-like superfamily H9K48_RS11735 PF04247 Invasion gene expression up-regulator, SirB H9K48_RS11740 PF13847 Methyltransferase domain H9K48_RS11740 PF17827 PrmC N-terminal domain H9K48_RS11745 PF00472 RF-1 domain H9K48_RS11745 PF03462 PCRF domain H9K48_RS11750 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H9K48_RS11750 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H9K48_RS11750 PF01488 Shikimate / quinate 5-dehydrogenase H9K48_RS11755 PF03550 Outer membrane lipoprotein LolB H9K48_RS11760 PF08544 GHMP kinases C terminal H9K48_RS11760 PF00288 GHMP kinases N terminal domain H9K48_RS11765 PF14572 Phosphoribosyl synthetase-associated domain H9K48_RS11765 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H9K48_RS11770 PF01195 Peptidyl-tRNA hydrolase H9K48_RS11775 PF01926 50S ribosome-binding GTPase H9K48_RS11775 PF06071 Protein of unknown function (DUF933) H9K48_RS11890 PF01494 FAD binding domain H9K48_RS11895 PF01938 TRAM domain H9K48_RS11895 PF00919 Uncharacterized protein family UPF0004 H9K48_RS11895 PF04055 Radical SAM superfamily H9K48_RS11900 PF02562 PhoH-like protein H9K48_RS11905 PF02130 Uncharacterized protein family UPF0054 H9K48_RS11910 PF00571 CBS domain H9K48_RS11910 PF03471 Transporter associated domain H9K48_RS11915 PF00795 Carbon-nitrogen hydrolase H9K48_RS11920 PF07295 Zinc-ribbon containing domain H9K48_RS11925 PF13603 Leucyl-tRNA synthetase, Domain 2 H9K48_RS11925 PF00133 tRNA synthetases class I (I, L, M and V) H9K48_RS11925 PF08264 Anticodon-binding domain of tRNA H9K48_RS11930 PF04390 Lipopolysaccharide-assembly H9K48_RS11935 PF14840 Processivity clamp loader gamma complex DNA pol III C-term H9K48_RS11935 PF06144 DNA polymerase III, delta subunit H9K48_RS11945 PF02590 Predicted SPOUT methyltransferase H9K48_RS11950 PF03717 Penicillin-binding Protein dimerisation domain H9K48_RS11950 PF00905 Penicillin binding protein transpeptidase domain H9K48_RS11955 PF01098 Cell cycle protein H9K48_RS11960 PF05036 Sporulation related domain H9K48_RS11960 PF03330 Lytic transglycolase H9K48_RS11965 PF07943 Penicillin-binding protein 5, C-terminal domain H9K48_RS11965 PF00768 D-alanyl-D-alanine carboxypeptidase H9K48_RS11970 PF04359 Protein of unknown function (DUF493) H9K48_RS11975 PF03099 Biotin/lipoate A/B protein ligase family H9K48_RS11980 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H9K48_RS11980 PF04055 Radical SAM superfamily H9K48_RS11985 PF00464 Serine hydroxymethyltransferase H9K48_RS11990 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H9K48_RS11990 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9K48_RS12005 PF00128 Alpha amylase, catalytic domain H9K48_RS12005 PF16657 Maltogenic Amylase, C-terminal domain H9K48_RS12010 PF02378 Phosphotransferase system, EIIC H9K48_RS12010 PF00367 phosphotransferase system, EIIB H9K48_RS12015 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS12025 PF00005 ABC transporter H9K48_RS12025 PF09383 NIL domain H9K48_RS12030 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS12035 PF03180 NLPA lipoprotein H9K48_RS12040 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) H9K48_RS12045 PF07348 Syd protein (SUKH-2) H9K48_RS12050 PF14489 QueF-like protein H9K48_RS12050 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H9K48_RS12060 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS12065 PF03641 Possible lysine decarboxylase H9K48_RS12065 PF11892 Domain of unknown function (DUF3412) H9K48_RS12065 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases H9K48_RS12070 PF01367 5'-3' exonuclease, C-terminal SAM fold H9K48_RS12070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9K48_RS12075 PF01223 DNA/RNA non-specific endonuclease H9K48_RS12080 PF01728 FtsJ-like methyltransferase H9K48_RS12080 PF18125 RlmM ferredoxin-like domain H9K48_RS12085 PF04241 Protein of unknown function (DUF423) H9K48_RS12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS12095 PF03466 LysR substrate binding domain H9K48_RS12100 PF02568 Thiamine biosynthesis protein (ThiI) H9K48_RS12100 PF02926 THUMP domain H9K48_RS12105 PF00691 OmpA family H9K48_RS12110 PF01618 MotA/TolQ/ExbB proton channel family H9K48_RS12115 PF02609 Exonuclease VII small subunit H9K48_RS12120 PF00348 Polyprenyl synthetase H9K48_RS12125 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H9K48_RS12125 PF02779 Transketolase, pyrimidine binding domain H9K48_RS12125 PF02780 Transketolase, C-terminal domain H9K48_RS12130 PF04608 Phosphatidylglycerophosphatase A H9K48_RS12135 PF00586 AIR synthase related protein, N-terminal domain H9K48_RS12135 PF02769 AIR synthase related protein, C-terminal domain H9K48_RS12140 PF01029 NusB family H9K48_RS12145 PF00885 6,7-dimethyl-8-ribityllumazine synthase H9K48_RS12150 PF00925 GTP cyclohydrolase II H9K48_RS12150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9K48_RS12155 PF00677 Lumazine binding domain H9K48_RS12160 PF01872 RibD C-terminal domain H9K48_RS12160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K48_RS12165 PF03477 ATP cone domain H9K48_RS12170 PF00171 Aldehyde dehydrogenase family H9K48_RS12175 PF00696 Amino acid kinase family H9K48_RS12175 PF01472 PUA domain H9K48_RS12180 PF07417 Sigma factor-binding transcriptional regulator Crl H9K48_RS12185 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) H9K48_RS12190 PF00156 Phosphoribosyl transferase domain H9K48_RS12195 PF00860 Permease family H9K48_RS12200 PF07687 Peptidase dimerisation domain H9K48_RS12200 PF01546 Peptidase family M20/M25/M40 H9K48_RS12225 PF02769 AIR synthase related protein, C-terminal domain H9K48_RS12225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H9K48_RS12225 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H9K48_RS12230 PF01464 Transglycosylase SLT domain H9K48_RS12230 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS12235 PF14437 MafB19-like deaminase H9K48_RS12240 PF03806 AbgT putative transporter family H9K48_RS12260 PF07963 Prokaryotic N-terminal methylation motif H9K48_RS12260 PF00114 Pilin (bacterial filament) H9K48_RS12265 PF00114 Pilin (bacterial filament) H9K48_RS12265 PF07963 Prokaryotic N-terminal methylation motif H9K48_RS12270 PF01556 DnaJ C terminal domain H9K48_RS12270 PF00684 DnaJ central domain H9K48_RS12270 PF00226 DnaJ domain H9K48_RS12275 PF00012 Hsp70 protein H9K48_RS12280 PF00375 Sodium:dicarboxylate symporter family H9K48_RS12285 PF01025 GrpE H9K48_RS12290 PF01513 ATP-NAD kinase H9K48_RS12300 PF02463 RecF/RecN/SMC N terminal domain H9K48_RS12305 PF04355 SmpA / OmlA family H9K48_RS12310 PF03658 RnfH family Ubiquitin H9K48_RS12315 PF03364 Polyketide cyclase / dehydrase and lipid transport H9K48_RS12320 PF01668 SmpB protein H9K48_RS12375 PF02223 Thymidylate kinase H9K48_RS12405 PF06445 GyrI-like small molecule binding domain H9K48_RS12405 PF12833 Helix-turn-helix domain H9K48_RS12410 PF02810 SEC-C motif H9K48_RS12410 PF01043 SecA preprotein cross-linking domain H9K48_RS12410 PF07516 SecA Wing and Scaffold domain H9K48_RS12410 PF07517 SecA DEAD-like domain H9K48_RS12460 PF03466 LysR substrate binding domain H9K48_RS12460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS12465 PF00583 Acetyltransferase (GNAT) family H9K48_RS12465 PF00795 Carbon-nitrogen hydrolase H9K48_RS12485 PF00202 Aminotransferase class-III H9K48_RS12490 PF01053 Cys/Met metabolism PLP-dependent enzyme H9K48_RS12495 PF07969 Amidohydrolase family H9K48_RS12510 PF03466 LysR substrate binding domain H9K48_RS12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS12515 PF01266 FAD dependent oxidoreductase H9K48_RS12520 PF01235 Sodium:alanine symporter family H9K48_RS12530 PF01184 GPR1/FUN34/yaaH family H9K48_RS12535 PF06483 Chitinase C H9K48_RS12535 PF00704 Glycosyl hydrolases family 18 H9K48_RS12540 PF03553 Na+/H+ antiporter family H9K48_RS12545 PF00117 Glutamine amidotransferase class-I H9K48_RS12545 PF00958 GMP synthase C terminal domain H9K48_RS12545 PF02540 NAD synthase H9K48_RS12550 PF00571 CBS domain H9K48_RS12550 PF00478 IMP dehydrogenase / GMP reductase domain H9K48_RS12555 PF02601 Exonuclease VII, large subunit H9K48_RS12555 PF13742 OB-fold nucleic acid binding domain H9K48_RS12570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H9K48_RS12570 PF01926 50S ribosome-binding GTPase H9K48_RS12575 PF13360 PQQ-like domain H9K48_RS12580 PF09976 Tetratricopeptide repeat-like domain H9K48_RS12585 PF03129 Anticodon binding domain H9K48_RS12585 PF13393 Histidyl-tRNA synthetase H9K48_RS12590 PF04551 GcpE protein H9K48_RS12595 PF13464 Domain of unknown function (DUF4115) H9K48_RS12600 PF04055 Radical SAM superfamily H9K48_RS12605 PF00334 Nucleoside diphosphate kinase H9K48_RS12610 PF12404 Peptidase H9K48_RS12610 PF00883 Cytosol aminopeptidase family, catalytic domain H9K48_RS12615 PF04384 Iron-sulphur cluster assembly H9K48_RS12620 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K48_RS12625 PF00012 Hsp70 protein H9K48_RS12630 PF07743 HSCB C-terminal oligomerisation domain H9K48_RS12630 PF00226 DnaJ domain H9K48_RS12635 PF01521 Iron-sulphur cluster biosynthesis H9K48_RS12640 PF01592 NifU-like N terminal domain H9K48_RS12645 PF00266 Aminotransferase class-V H9K48_RS12650 PF02082 Transcriptional regulator H9K48_RS12655 PF00588 SpoU rRNA Methylase family H9K48_RS12660 PF00459 Inositol monophosphatase family H9K48_RS12665 PF07549 SecD/SecF GG Motif H9K48_RS12665 PF02355 Protein export membrane protein H9K48_RS12670 PF02355 Protein export membrane protein H9K48_RS12670 PF13721 SecD export protein N-terminal TM region H9K48_RS12670 PF07549 SecD/SecF GG Motif H9K48_RS12675 PF02699 Preprotein translocase subunit H9K48_RS12680 PF01702 Queuine tRNA-ribosyltransferase H9K48_RS12685 PF02547 Queuosine biosynthesis protein H9K48_RS12695 PF00571 CBS domain H9K48_RS12700 PF00463 Isocitrate lyase family H9K48_RS12705 PF01274 Malate synthase H9K48_RS12710 PF03466 LysR substrate binding domain H9K48_RS12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS12715 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9K48_RS12715 PF00578 AhpC/TSA family H9K48_RS12720 PF03932 CutC family H9K48_RS12725 PF03976 Polyphosphate kinase 2 (PPK2) H9K48_RS12730 PF01895 PhoU domain H9K48_RS12735 PF00005 ABC transporter H9K48_RS12740 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS12745 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS12750 PF13089 Polyphosphate kinase N-terminal domain H9K48_RS12750 PF17941 Polyphosphate kinase C-terminal domain 1 H9K48_RS12750 PF13090 Polyphosphate kinase C-terminal domain 2 H9K48_RS12750 PF02503 Polyphosphate kinase middle domain H9K48_RS12755 PF02541 Ppx/GppA phosphatase family H9K48_RS12760 PF12849 PBP superfamily domain H9K48_RS12765 PF11808 Phosphate regulon sensor protein PhoR H9K48_RS12765 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS12765 PF00989 PAS fold H9K48_RS12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS12770 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS12770 PF00072 Response regulator receiver domain H9K48_RS12775 PF04381 Putative exonuclease, RdgC H9K48_RS12780 PF01136 Peptidase family U32 H9K48_RS12780 PF16325 Peptidase family U32 C-terminal domain H9K48_RS12785 PF00037 4Fe-4S binding domain H9K48_RS12795 PF03411 Penicillin-insensitive murein endopeptidase H9K48_RS12840 PF17871 AAA lid domain H9K48_RS12840 PF07724 AAA domain (Cdc48 subfamily) H9K48_RS12840 PF00004 ATPase family associated with various cellular activities (AAA) H9K48_RS12840 PF10431 C-terminal, D2-small domain, of ClpB protein H9K48_RS12840 PF02861 Clp amino terminal domain, pathogenicity island component H9K48_RS12845 PF02578 Multi-copper polyphenol oxidoreductase laccase H9K48_RS12850 PF01479 S4 domain H9K48_RS12850 PF00849 RNA pseudouridylate synthase H9K48_RS12855 PF13525 Outer membrane lipoprotein H9K48_RS12860 PF01464 Transglycosylase SLT domain H9K48_RS12860 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS12865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9K48_RS12870 PF00800 Prephenate dehydratase H9K48_RS12870 PF01817 Chorismate mutase type II H9K48_RS12875 PF01931 Protein of unknown function DUF84 H9K48_RS12880 PF01371 Trp repressor protein H9K48_RS12885 PF01464 Transglycosylase SLT domain H9K48_RS12885 PF14718 Soluble lytic murein transglycosylase L domain H9K48_RS12890 PF00005 ABC transporter H9K48_RS12890 PF12848 ABC transporter H9K48_RS12895 PF07238 PilZ domain H9K48_RS12900 PF04225 Opacity-associated protein A LysM-like domain H9K48_RS12900 PF01551 Peptidase family M23 H9K48_RS12905 PF01817 Chorismate mutase type II H9K48_RS12905 PF02153 Prephenate dehydrogenase H9K48_RS12910 PF00793 DAHP synthetase I family H9K48_RS12915 PF00933 Glycosyl hydrolase family 3 N terminal domain H9K48_RS12920 PF03702 Anhydro-N-acetylmuramic acid kinase H9K48_RS12925 PF13580 SIS domain H9K48_RS12940 PF02554 Carbon starvation protein CstA H9K48_RS12945 PF07694 5TMR of 5TMR-LYT H9K48_RS12945 PF06580 Histidine kinase H9K48_RS12950 PF04397 LytTr DNA-binding domain H9K48_RS12950 PF00072 Response regulator receiver domain H9K48_RS12955 PF02401 LytB protein H9K48_RS12960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K48_RS12965 PF01252 Signal peptidase (SPase) II H9K48_RS12970 PF06827 Zinc finger found in FPG and IleRS H9K48_RS12970 PF00133 tRNA synthetases class I (I, L, M and V) H9K48_RS12970 PF08264 Anticodon-binding domain of tRNA H9K48_RS12975 PF06574 FAD synthetase H9K48_RS12975 PF01687 Riboflavin kinase H9K48_RS12980 PF03023 Lipid II flippase MurJ H9K48_RS12985 PF01649 Ribosomal protein S20 H9K48_RS12990 PF01022 Bacterial regulatory protein, arsR family H9K48_RS12995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS12995 PF03466 LysR substrate binding domain H9K48_RS13000 PF02690 Na+/Pi-cotransporter H9K48_RS13010 PF00303 Thymidylate synthase H9K48_RS13015 PF01790 Prolipoprotein diacylglyceryl transferase H9K48_RS13020 PF01925 Sulfite exporter TauE/SafE H9K48_RS13025 PF05524 PEP-utilising enzyme, N-terminal H9K48_RS13025 PF00391 PEP-utilising enzyme, mobile domain H9K48_RS13025 PF02896 PEP-utilising enzyme, TIM barrel domain H9K48_RS13025 PF01590 GAF domain H9K48_RS13030 PF00293 NUDIX domain H9K48_RS13035 PF02976 DNA mismatch repair enzyme MutH H9K48_RS13045 PF00248 Aldo/keto reductase family H9K48_RS13055 PF02954 Bacterial regulatory protein, Fis family H9K48_RS13055 PF00072 Response regulator receiver domain H9K48_RS13055 PF00158 Sigma-54 interaction domain H9K48_RS13060 PF00152 tRNA synthetases class II (D, K and N) H9K48_RS13060 PF01336 OB-fold nucleic acid binding domain H9K48_RS13070 PF01368 DHH family H9K48_RS13070 PF02272 DHHA1 domain H9K48_RS13070 PF17768 RecJ OB domain H9K48_RS13075 PF10411 Disulfide bond isomerase protein N-terminus H9K48_RS13075 PF13098 Thioredoxin-like domain H9K48_RS13080 PF02899 Phage integrase, N-terminal SAM-like domain H9K48_RS13080 PF00589 Phage integrase family H9K48_RS13085 PF00258 Flavodoxin H9K48_RS13090 PF05525 Branched-chain amino acid transport protein H9K48_RS13095 PF05175 Methyltransferase small domain H9K48_RS13100 PF00270 DEAD/DEAH box helicase H9K48_RS13100 PF00271 Helicase conserved C-terminal domain H9K48_RS13105 PF03883 Peroxide stress protein YaaA H9K48_RS13110 PF01235 Sodium:alanine symporter family H9K48_RS13125 PF03167 Uracil DNA glycosylase superfamily H9K48_RS13130 PF01261 Xylose isomerase-like TIM barrel H9K48_RS13135 PF01228 Glycine radical H9K48_RS13140 PF14821 Threonine synthase N terminus H9K48_RS13140 PF00291 Pyridoxal-phosphate dependent enzyme H9K48_RS13145 PF08544 GHMP kinases C terminal H9K48_RS13145 PF00288 GHMP kinases N terminal domain H9K48_RS13150 PF13840 ACT domain H9K48_RS13150 PF01842 ACT domain H9K48_RS13150 PF00696 Amino acid kinase family H9K48_RS13150 PF00742 Homoserine dehydrogenase H9K48_RS13150 PF03447 Homoserine dehydrogenase, NAD binding domain H9K48_RS13160 PF03737 Aldolase/RraA H9K48_RS13170 PF00072 Response regulator receiver domain H9K48_RS13170 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS13180 PF00072 Response regulator receiver domain H9K48_RS13180 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS13180 PF01627 Hpt domain H9K48_RS13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS13180 PF00989 PAS fold H9K48_RS13180 PF18415 Histidine kinase receptor ArcB trans-membrane domain H9K48_RS13185 PF00360 Phytochrome region H9K48_RS13185 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS13185 PF01590 GAF domain H9K48_RS13185 PF00563 EAL domain H9K48_RS13190 PF04055 Radical SAM superfamily H9K48_RS13190 PF16199 Radical_SAM C-terminal domain H9K48_RS13195 PF01493 GXGXG motif H9K48_RS13195 PF00310 Glutamine amidotransferases class-II H9K48_RS13195 PF04898 Glutamate synthase central domain H9K48_RS13195 PF01645 Conserved region in glutamate synthase H9K48_RS13200 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS13200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K48_RS13205 PF00310 Glutamine amidotransferases class-II H9K48_RS13205 PF04898 Glutamate synthase central domain H9K48_RS13205 PF01645 Conserved region in glutamate synthase H9K48_RS13205 PF01493 GXGXG motif H9K48_RS13210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9K48_RS13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS13220 PF01048 Phosphorylase superfamily H9K48_RS13225 PF03186 CobD/Cbib protein H9K48_RS13225 PF17113 Regulatory signalling modulator protein AmpE H9K48_RS13230 PF01497 Periplasmic binding protein H9K48_RS13235 PF03458 UPF0126 domain H9K48_RS13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS13240 PF03466 LysR substrate binding domain H9K48_RS13245 PF01925 Sulfite exporter TauE/SafE H9K48_RS13260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K48_RS13260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H9K48_RS13260 PF02142 MGS-like domain H9K48_RS13265 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H9K48_RS13265 PF00117 Glutamine amidotransferase class-I H9K48_RS13270 PF05173 Dihydrodipicolinate reductase, C-terminus H9K48_RS13270 PF01113 Dihydrodipicolinate reductase, N-terminus H9K48_RS13275 PF00293 NUDIX domain H9K48_RS13280 PF07516 SecA Wing and Scaffold domain H9K48_RS13280 PF07517 SecA DEAD-like domain H9K48_RS13280 PF01043 SecA preprotein cross-linking domain H9K48_RS13280 PF02810 SEC-C motif H9K48_RS13290 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H9K48_RS13295 PF12327 FtsZ family, C-terminal domain H9K48_RS13295 PF00091 Tubulin/FtsZ family, GTPase domain H9K48_RS13300 PF02491 SHS2 domain inserted in FTSA H9K48_RS13305 PF08478 POTRA domain, FtsQ-type H9K48_RS13305 PF03799 Cell division protein FtsQ H9K48_RS13310 PF08245 Mur ligase middle domain H9K48_RS13310 PF02875 Mur ligase family, glutamate ligase domain H9K48_RS13310 PF01225 Mur ligase family, catalytic domain H9K48_RS13315 PF04101 Glycosyltransferase family 28 C-terminal domain H9K48_RS13315 PF03033 Glycosyltransferase family 28 N-terminal domain H9K48_RS13320 PF01098 Cell cycle protein H9K48_RS13325 PF02875 Mur ligase family, glutamate ligase domain H9K48_RS13325 PF08245 Mur ligase middle domain H9K48_RS13330 PF00953 Glycosyl transferase family 4 H9K48_RS13330 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 H9K48_RS13335 PF02875 Mur ligase family, glutamate ligase domain H9K48_RS13335 PF08245 Mur ligase middle domain H9K48_RS13335 PF01225 Mur ligase family, catalytic domain H9K48_RS13340 PF01225 Mur ligase family, catalytic domain H9K48_RS13340 PF02875 Mur ligase family, glutamate ligase domain H9K48_RS13340 PF08245 Mur ligase middle domain H9K48_RS13345 PF03717 Penicillin-binding Protein dimerisation domain H9K48_RS13345 PF00905 Penicillin binding protein transpeptidase domain H9K48_RS13350 PF04999 Cell division protein FtsL H9K48_RS13355 PF01795 MraW methylase family H9K48_RS13365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K48_RS13370 PF04348 LppC putative lipoprotein H9K48_RS13375 PF02021 Uncharacterised protein family UPF0102 H9K48_RS13380 PF13580 SIS domain H9K48_RS13385 PF04972 BON domain H9K48_RS13390 PF04386 Stringent starvation protein B H9K48_RS13395 PF00043 Glutathione S-transferase, C-terminal domain H9K48_RS13395 PF02798 Glutathione S-transferase, N-terminal domain H9K48_RS13400 PF02167 Cytochrome C1 family H9K48_RS13405 PF00032 Cytochrome b(C-terminal)/b6/petD H9K48_RS13405 PF00033 Cytochrome b/b6/petB H9K48_RS13410 PF00355 Rieske [2Fe-2S] domain H9K48_RS13410 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H9K48_RS13415 PF00380 Ribosomal protein S9/S16 H9K48_RS13420 PF00572 Ribosomal protein L13 H9K48_RS13425 PF03969 AFG1-like ATPase H9K48_RS13430 PF06295 Protein of unknown function (DUF1043) H9K48_RS13435 PF00595 PDZ domain H9K48_RS13440 PF13180 PDZ domain H9K48_RS13445 PF03989 DNA gyrase C-terminal domain, beta-propeller H9K48_RS13445 PF00521 DNA gyrase/topoisomerase IV, subunit A H9K48_RS13450 PF01751 Toprim domain H9K48_RS13450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS13450 PF00986 DNA gyrase B subunit, carboxyl terminus H9K48_RS13450 PF00204 DNA gyrase B H9K48_RS13455 PF05728 Uncharacterised protein family (UPF0227) H9K48_RS13460 PF00149 Calcineurin-like phosphoesterase H9K48_RS13465 PF06853 Protein of unknown function (DUF1249) H9K48_RS13470 PF00293 NUDIX domain H9K48_RS13475 PF02321 Outer membrane efflux protein H9K48_RS13480 PF01467 Cytidylyltransferase-like H9K48_RS13480 PF00294 pfkB family carbohydrate kinase H9K48_RS13485 PF08335 GlnD PII-uridylyltransferase H9K48_RS13485 PF03710 Glutamate-ammonia ligase adenylyltransferase H9K48_RS13490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS13490 PF00672 HAMP domain H9K48_RS13500 PF01928 CYTH domain H9K48_RS13505 PF01865 Protein of unknown function DUF47 H9K48_RS13510 PF01384 Phosphate transporter family H9K48_RS13515 PF08239 Bacterial SH3 domain H9K48_RS13525 PF13401 AAA domain H9K48_RS13525 PF01471 Putative peptidoglycan binding domain H9K48_RS13530 PF01966 HD domain H9K48_RS13530 PF01743 Poly A polymerase head domain H9K48_RS13530 PF12627 Probable RNA and SrmB- binding site of polymerase A H9K48_RS13535 PF02673 Bacitracin resistance protein BacA H9K48_RS13540 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9K48_RS13545 PF02152 Dihydroneopterin aldolase H9K48_RS13550 PF02660 Glycerol-3-phosphate acyltransferase H9K48_RS13555 PF12697 Alpha/beta hydrolase family H9K48_RS13560 PF00814 Glycoprotease family H9K48_RS13565 PF01165 Ribosomal protein S21 H9K48_RS13570 PF09424 Yqey-like protein H9K48_RS13575 PF08275 DNA primase catalytic core, N-terminal domain H9K48_RS13575 PF08278 DNA primase DnaG DnaB-binding H9K48_RS13575 PF01807 CHC2 zinc finger H9K48_RS13575 PF10410 DnaB-helicase binding domain of primase H9K48_RS13580 PF04546 Sigma-70, non-essential region H9K48_RS13580 PF03979 Sigma-70 factor, region 1.1 H9K48_RS13580 PF00140 Sigma-70 factor, region 1.2 H9K48_RS13580 PF04542 Sigma-70 region 2 H9K48_RS13580 PF04539 Sigma-70 region 3 H9K48_RS13580 PF04545 Sigma-70, region 4 H9K48_RS13595 PF13657 HipA N-terminal domain H9K48_RS13595 PF07804 HipA-like C-terminal domain H9K48_RS13615 PF00580 UvrD/REP helicase N-terminal domain H9K48_RS13615 PF13361 UvrD-like helicase C-terminal domain H9K48_RS13645 PF13657 HipA N-terminal domain H9K48_RS13645 PF07804 HipA-like C-terminal domain H9K48_RS13655 PF07693 KAP family P-loop domain H9K48_RS13680 PF03180 NLPA lipoprotein H9K48_RS13710 PF02378 Phosphotransferase system, EIIC H9K48_RS13710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K48_RS13710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K48_RS13715 PF01232 Mannitol dehydrogenase Rossmann domain H9K48_RS13715 PF08125 Mannitol dehydrogenase C-terminal domain H9K48_RS13720 PF05068 Mannitol repressor H9K48_RS13725 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS13730 PF00672 HAMP domain H9K48_RS13730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS13730 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS13735 PF00072 Response regulator receiver domain H9K48_RS13735 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS13745 PF01380 SIS domain H9K48_RS13750 PF00455 DeoR C terminal sensor domain H9K48_RS13750 PF08220 DeoR-like helix-turn-helix domain H9K48_RS13755 PF00224 Pyruvate kinase, barrel domain H9K48_RS13755 PF02887 Pyruvate kinase, alpha/beta domain H9K48_RS13765 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS13770 PF10369 Small subunit of acetolactate synthase H9K48_RS13775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9K48_RS13775 PF00205 Thiamine pyrophosphate enzyme, central domain H9K48_RS13775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9K48_RS13780 PF00501 AMP-binding enzyme H9K48_RS13785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS13785 PF03466 LysR substrate binding domain H9K48_RS13795 PF01569 PAP2 superfamily H9K48_RS13805 PF08502 LeuA allosteric (dimerisation) domain H9K48_RS13805 PF00682 HMGL-like H9K48_RS13810 PF00180 Isocitrate/isopropylmalate dehydrogenase H9K48_RS13815 PF00330 Aconitase family (aconitate hydratase) H9K48_RS13820 PF00694 Aconitase C-terminal domain H9K48_RS13830 PF00226 DnaJ domain H9K48_RS13830 PF05099 Tellurite resistance protein TerB H9K48_RS13835 PF04453 LPS transport system D H9K48_RS13835 PF03968 OstA-like protein H9K48_RS13840 PF09312 SurA N-terminal domain H9K48_RS13845 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H9K48_RS13850 PF00398 Ribosomal RNA adenine dimethylase H9K48_RS13855 PF04379 ApaG domain H9K48_RS13860 PF00149 Calcineurin-like phosphoesterase H9K48_RS13865 PF00186 Dihydrofolate reductase H9K48_RS13870 PF12821 Threonine/Serine exporter, ThrE H9K48_RS13875 PF06738 Putative threonine/serine exporter H9K48_RS13880 PF01926 50S ribosome-binding GTPase H9K48_RS13880 PF01018 GTP1/OBG H9K48_RS13885 PF01016 Ribosomal L27 protein H9K48_RS13890 PF00829 Ribosomal prokaryotic L21 protein H9K48_RS13895 PF00348 Polyprenyl synthetase H9K48_RS13905 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9K48_RS13905 PF00056 lactate/malate dehydrogenase, NAD binding domain H9K48_RS13910 PF02863 Arginine repressor, C-terminal domain H9K48_RS13910 PF01316 Arginine repressor, DNA binding domain H9K48_RS13915 PF16868 NMT1-like family H9K48_RS13930 PF00005 ABC transporter H9K48_RS13935 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS13945 PF02441 Flavoprotein H9K48_RS13950 PF08245 Mur ligase middle domain H9K48_RS13950 PF02875 Mur ligase family, glutamate ligase domain H9K48_RS13950 PF01225 Mur ligase family, catalytic domain H9K48_RS13955 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H9K48_RS13960 PF00719 Inorganic pyrophosphatase H9K48_RS13970 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like H9K48_RS13975 PF04357 TamB, inner membrane protein subunit of TAM complex H9K48_RS13980 PF01103 Surface antigen H9K48_RS13980 PF17243 POTRA domain TamA domain 1 H9K48_RS13985 PF01625 Peptide methionine sulfoxide reductase H9K48_RS13990 PF06526 Protein of unknown function (DUF1107) H9K48_RS13995 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9K48_RS14000 PF10795 Protein of unknown function (DUF2607) H9K48_RS14010 PF00005 ABC transporter H9K48_RS14035 PF03600 Citrate transporter H9K48_RS14035 PF02080 TrkA-C domain H9K48_RS14040 PF00009 Elongation factor Tu GTP binding domain H9K48_RS14045 PF01507 Phosphoadenosine phosphosulfate reductase family H9K48_RS14050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K48_RS14050 PF10414 Sirohaem synthase dimerisation region H9K48_RS14050 PF14824 Sirohaem biosynthesis protein central H9K48_RS14055 PF00149 Calcineurin-like phosphoesterase H9K48_RS14055 PF02872 5'-nucleotidase, C-terminal domain H9K48_RS14065 PF00270 DEAD/DEAH box helicase H9K48_RS14065 PF03880 DbpA RNA binding domain H9K48_RS14065 PF00271 Helicase conserved C-terminal domain H9K48_RS14070 PF13673 Acetyltransferase (GNAT) domain H9K48_RS14080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K48_RS14080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K48_RS14090 PF01196 Ribosomal protein L17 H9K48_RS14095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H9K48_RS14095 PF01000 RNA polymerase Rpb3/RpoA insert domain H9K48_RS14095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H9K48_RS14100 PF00163 Ribosomal protein S4/S9 N-terminal domain H9K48_RS14100 PF01479 S4 domain H9K48_RS14105 PF00411 Ribosomal protein S11 H9K48_RS14110 PF00416 Ribosomal protein S13/S18 H9K48_RS14115 PF00444 Ribosomal protein L36 H9K48_RS14120 PF00344 SecY translocase H9K48_RS14125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H9K48_RS14130 PF00327 Ribosomal protein L30p/L7e H9K48_RS14135 PF00333 Ribosomal protein S5, N-terminal domain H9K48_RS14135 PF03719 Ribosomal protein S5, C-terminal domain H9K48_RS14140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H9K48_RS14145 PF00347 Ribosomal protein L6 H9K48_RS14150 PF00410 Ribosomal protein S8 H9K48_RS14155 PF00253 Ribosomal protein S14p/S29e H9K48_RS14160 PF00673 ribosomal L5P family C-terminus H9K48_RS14160 PF00281 Ribosomal protein L5 H9K48_RS14165 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H9K48_RS14165 PF00467 KOW motif H9K48_RS14170 PF00238 Ribosomal protein L14p/L23e H9K48_RS14175 PF00366 Ribosomal protein S17 H9K48_RS14180 PF00831 Ribosomal L29 protein H9K48_RS14185 PF00252 Ribosomal protein L16p/L10e H9K48_RS14190 PF07650 KH domain H9K48_RS14190 PF00189 Ribosomal protein S3, C-terminal domain H9K48_RS14195 PF00237 Ribosomal protein L22p/L17e H9K48_RS14200 PF00203 Ribosomal protein S19 H9K48_RS14205 PF00181 Ribosomal Proteins L2, RNA binding domain H9K48_RS14205 PF03947 Ribosomal Proteins L2, C-terminal domain H9K48_RS14210 PF00276 Ribosomal protein L23 H9K48_RS14215 PF00573 Ribosomal protein L4/L1 family H9K48_RS14220 PF00297 Ribosomal protein L3 H9K48_RS14225 PF00338 Ribosomal protein S10p/S20e H9K48_RS14230 PF01197 Ribosomal protein L31 H9K48_RS14235 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H9K48_RS14235 PF18074 Primosomal protein N C-terminal domain H9K48_RS14235 PF00271 Helicase conserved C-terminal domain H9K48_RS14235 PF17764 3′ DNA-binding domain (3′BD) H9K48_RS14235 PF00270 DEAD/DEAH box helicase H9K48_RS14240 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS14250 PF00227 Proteasome subunit H9K48_RS14255 PF00004 ATPase family associated with various cellular activities (AAA) H9K48_RS14255 PF07724 AAA domain (Cdc48 subfamily) H9K48_RS14260 PF01040 UbiA prenyltransferase family H9K48_RS14265 PF03737 Aldolase/RraA H9K48_RS14270 PF06005 Cell division protein ZapB H9K48_RS14275 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded H9K48_RS14280 PF08220 DeoR-like helix-turn-helix domain H9K48_RS14280 PF00455 DeoR C terminal sensor domain H9K48_RS14300 PF00121 Triosephosphate isomerase H9K48_RS14305 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H9K48_RS14305 PF10996 Beta-Casp domain H9K48_RS14305 PF00753 Metallo-beta-lactamase superfamily H9K48_RS14315 PF01370 NAD dependent epimerase/dehydratase family H9K48_RS14320 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H9K48_RS14320 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H9K48_RS14320 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H9K48_RS14325 PF00953 Glycosyl transferase family 4 H9K48_RS14340 PF00534 Glycosyl transferases group 1 H9K48_RS14345 PF00535 Glycosyl transferase family 2 H9K48_RS14370 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H9K48_RS14375 PF04321 RmlD substrate binding domain H9K48_RS14380 PF00483 Nucleotidyl transferase H9K48_RS14385 PF16363 GDP-mannose 4,6 dehydratase H9K48_RS14420 PF06082 Exopolysaccharide biosynthesis protein YbjH H9K48_RS14425 PF01370 NAD dependent epimerase/dehydratase family H9K48_RS14430 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K48_RS14435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9K48_RS14440 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H9K48_RS14465 PF00795 Carbon-nitrogen hydrolase H9K48_RS14470 PF00202 Aminotransferase class-III H9K48_RS14480 PF02348 Cytidylyltransferase H9K48_RS14480 PF13472 GDSL-like Lipase/Acylhydrolase family H9K48_RS14485 PF00483 Nucleotidyl transferase H9K48_RS14495 PF03102 NeuB family H9K48_RS14495 PF08666 SAF domain H9K48_RS14500 PF02350 UDP-N-acetylglucosamine 2-epimerase H9K48_RS14505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H9K48_RS14510 PF02719 Polysaccharide biosynthesis protein H9K48_RS14520 PF01219 Prokaryotic diacylglycerol kinase H9K48_RS14525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9K48_RS14530 PF00535 Glycosyl transferase family 2 H9K48_RS14535 PF00535 Glycosyl transferase family 2 H9K48_RS14540 PF05686 Glycosyl transferase family 90 H9K48_RS14545 PF01467 Cytidylyltransferase-like H9K48_RS14550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H9K48_RS14550 PF06827 Zinc finger found in FPG and IleRS H9K48_RS14550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H9K48_RS14560 PF00884 Sulfatase H9K48_RS14565 PF00471 Ribosomal protein L33 H9K48_RS14570 PF00830 Ribosomal L28 family H9K48_RS14575 PF04002 RadC-like JAB domain H9K48_RS14580 PF00672 HAMP domain H9K48_RS14580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS14580 PF17200 Single Cache domain 2 H9K48_RS14585 PF04127 DNA / pantothenate metabolism flavoprotein H9K48_RS14585 PF02441 Flavoprotein H9K48_RS14590 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS14595 PF03279 Bacterial lipid A biosynthesis acyltransferase H9K48_RS14600 PF00156 Phosphoribosyl transferase domain H9K48_RS14605 PF01138 3' exoribonuclease family, domain 1 H9K48_RS14605 PF03725 3' exoribonuclease family, domain 2 H9K48_RS14610 PF08340 Domain of unknown function (DUF1732) H9K48_RS14610 PF03755 YicC-like family, N-terminal region H9K48_RS14620 PF00005 ABC transporter H9K48_RS14620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS14625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS14625 PF00005 ABC transporter H9K48_RS14630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS14635 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS14635 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K48_RS14640 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS14645 PF00593 TonB dependent receptor H9K48_RS14645 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS14660 PF01618 MotA/TolQ/ExbB proton channel family H9K48_RS14665 PF02472 Biopolymer transport protein ExbD/TolR H9K48_RS14680 PF00625 Guanylate kinase H9K48_RS14685 PF01192 RNA polymerase Rpb6 H9K48_RS14690 PF13291 ACT domain H9K48_RS14690 PF04607 Region found in RelA / SpoT proteins H9K48_RS14690 PF02824 TGS domain H9K48_RS14695 PF12105 SpoU, rRNA methylase, C-terminal H9K48_RS14695 PF00588 SpoU rRNA Methylase family H9K48_RS14700 PF00271 Helicase conserved C-terminal domain H9K48_RS14700 PF17191 RecG wedge domain H9K48_RS14700 PF00270 DEAD/DEAH box helicase H9K48_RS14705 PF00860 Permease family H9K48_RS14710 PF00672 HAMP domain H9K48_RS14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS14710 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS14715 PF00072 Response regulator receiver domain H9K48_RS14715 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS14725 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K48_RS14725 PF03449 Transcription elongation factor, N-terminal H9K48_RS14735 PF00575 S1 RNA binding domain H9K48_RS14735 PF09371 Tex-like protein N-terminal domain H9K48_RS14735 PF16921 Tex protein YqgF-like domain H9K48_RS14735 PF17674 HHH domain H9K48_RS14745 PF00561 alpha/beta hydrolase fold H9K48_RS14750 PF00156 Phosphoribosyl transferase domain H9K48_RS14755 PF01521 Iron-sulphur cluster biosynthesis H9K48_RS14755 PF01106 NifU-like domain H9K48_RS14760 PF00293 NUDIX domain H9K48_RS14765 PF00459 Inositol monophosphatase family H9K48_RS14770 PF01203 Type II secretion system (T2SS), protein N H9K48_RS14775 PF04612 Type II secretion system (T2SS), protein M H9K48_RS14780 PF12693 GspL periplasmic domain H9K48_RS14780 PF05134 Type II secretion system (T2SS), protein L H9K48_RS14785 PF03934 Type II secretion system (T2SS), protein K H9K48_RS14790 PF07963 Prokaryotic N-terminal methylation motif H9K48_RS14790 PF11612 Type II secretion system (T2SS), protein J H9K48_RS14795 PF07963 Prokaryotic N-terminal methylation motif H9K48_RS14795 PF02501 Type II secretion system (T2SS), protein I H9K48_RS14800 PF12019 Type II transport protein GspH H9K48_RS14805 PF08334 Type II secretion system (T2SS), protein G H9K48_RS14805 PF07963 Prokaryotic N-terminal methylation motif H9K48_RS14810 PF00482 Type II secretion system (T2SS), protein F H9K48_RS14815 PF00437 Type II/IV secretion system protein H9K48_RS14820 PF00263 Bacterial type II and III secretion system protein H9K48_RS14820 PF03958 Bacterial type II/III secretion system short domain H9K48_RS14825 PF11356 Type II secretion system protein C H9K48_RS14830 PF01479 S4 domain H9K48_RS14835 PF01430 Hsp33 protein H9K48_RS14840 PF01293 Phosphoenolpyruvate carboxykinase H9K48_RS14850 PF09500 Putative thioesterase (yiiD_Cterm) H9K48_RS14850 PF00583 Acetyltransferase (GNAT) family H9K48_RS14855 PF02580 D-Tyr-tRNA(Tyr) deacylase H9K48_RS14860 PF03631 Virulence factor BrkB H9K48_RS14875 PF00679 Elongation factor G C-terminus H9K48_RS14875 PF00009 Elongation factor Tu GTP binding domain H9K48_RS14875 PF03144 Elongation factor Tu domain 2 H9K48_RS14880 PF03951 Glutamine synthetase, beta-Grasp domain H9K48_RS14880 PF00120 Glutamine synthetase, catalytic domain H9K48_RS14890 PF00989 PAS fold H9K48_RS14890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS14890 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS14895 PF02954 Bacterial regulatory protein, Fis family H9K48_RS14895 PF00072 Response regulator receiver domain H9K48_RS14895 PF00158 Sigma-54 interaction domain H9K48_RS14900 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS14900 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS14900 PF00563 EAL domain H9K48_RS14905 PF00962 Adenosine/AMP deaminase H9K48_RS14910 PF06969 HemN C-terminal domain H9K48_RS14910 PF04055 Radical SAM superfamily H9K48_RS14915 PF10675 Protein of unknown function (DUF2489) H9K48_RS14920 PF04220 Der GTPase activator (YihI) H9K48_RS14930 PF00034 Cytochrome c H9K48_RS14935 PF01926 50S ribosome-binding GTPase H9K48_RS14940 PF01612 3'-5' exonuclease H9K48_RS14940 PF00476 DNA polymerase family A H9K48_RS14940 PF01367 5'-3' exonuclease, C-terminal SAM fold H9K48_RS14940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9K48_RS14950 PF00490 Delta-aminolevulinic acid dehydratase H9K48_RS14955 PF01026 TatD related DNase H9K48_RS14960 PF00902 Sec-independent protein translocase protein (TatC) H9K48_RS14965 PF02416 mttA/Hcf106 family H9K48_RS14970 PF02416 mttA/Hcf106 family H9K48_RS14975 PF03109 ABC1 family H9K48_RS14980 PF02036 SCP-2 sterol transfer family H9K48_RS14985 PF01209 ubiE/COQ5 methyltransferase family H9K48_RS14990 PF02646 RmuC family H9K48_RS15000 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS15000 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS15000 PF00563 EAL domain H9K48_RS15005 PF01594 AI-2E family transporter H9K48_RS15055 PF04972 BON domain H9K48_RS15060 PF01590 GAF domain H9K48_RS15060 PF00158 Sigma-54 interaction domain H9K48_RS15060 PF02954 Bacterial regulatory protein, Fis family H9K48_RS15070 PF10625 Universal stress protein B (UspB) H9K48_RS15075 PF00210 Ferritin-like domain H9K48_RS15080 PF00582 Universal stress protein family H9K48_RS15085 PF00892 EamA-like transporter family H9K48_RS15095 PF04445 Putative SAM-dependent methyltransferase H9K48_RS15100 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS15100 PF00563 EAL domain H9K48_RS15100 PF08448 PAS fold H9K48_RS15105 PF01037 Lrp/AsnC ligand binding domain H9K48_RS15110 PF01432 Peptidase family M3 H9K48_RS15115 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H9K48_RS15120 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS15120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K48_RS15125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS15125 PF03466 LysR substrate binding domain H9K48_RS15130 PF01048 Phosphorylase superfamily H9K48_RS15135 PF01081 KDPG and KHG aldolase H9K48_RS15140 PF02447 GntP family permease H9K48_RS15145 PF01202 Shikimate kinase H9K48_RS15150 PF00920 Dehydratase family H9K48_RS15155 PF00893 Small Multidrug Resistance protein H9K48_RS15160 PF00893 Small Multidrug Resistance protein H9K48_RS15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS15165 PF03466 LysR substrate binding domain H9K48_RS15170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K48_RS15170 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS15175 PF00069 Protein kinase domain H9K48_RS15205 PF12911 N-terminal TM domain of oligopeptide transport permease C H9K48_RS15205 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS15210 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS15215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS15220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS15220 PF00005 ABC transporter H9K48_RS15225 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS15255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9K48_RS15260 PF00580 UvrD/REP helicase N-terminal domain H9K48_RS15260 PF13361 UvrD-like helicase C-terminal domain H9K48_RS15265 PF16295 Tetracyclin repressor-like, C-terminal domain H9K48_RS15265 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS15270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS15275 PF00873 AcrB/AcrD/AcrF family H9K48_RS15280 PF04380 Membrane fusogenic activity H9K48_RS15285 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H9K48_RS15285 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H9K48_RS15290 PF03466 LysR substrate binding domain H9K48_RS15290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS15325 PF00132 Bacterial transferase hexapeptide (six repeats) H9K48_RS15330 PF07369 Protein of unknown function (DUF1488) H9K48_RS15335 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H9K48_RS15335 PF01488 Shikimate / quinate 5-dehydrogenase H9K48_RS15335 PF08501 Shikimate dehydrogenase substrate binding domain H9K48_RS15340 PF01218 Coproporphyrinogen III oxidase H9K48_RS15345 PF01300 Telomere recombination H9K48_RS15350 PF00731 AIR carboxylase H9K48_RS15355 PF02222 ATP-grasp domain H9K48_RS15355 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H9K48_RS15360 PF01396 Topoisomerase DNA binding C4 zinc finger H9K48_RS15365 PF04361 Protein of unknown function (DUF494) H9K48_RS15370 PF02481 DNA recombination-mediator protein A H9K48_RS15370 PF17782 DprA winged helix domain H9K48_RS15380 PF01327 Polypeptide deformylase H9K48_RS15385 PF02911 Formyl transferase, C-terminal domain H9K48_RS15385 PF00551 Formyl transferase H9K48_RS15390 PF01029 NusB family H9K48_RS15390 PF01189 16S rRNA methyltransferase RsmB/F H9K48_RS15395 PF02254 TrkA-N domain H9K48_RS15395 PF02080 TrkA-C domain H9K48_RS15400 PF02386 Cation transport protein H9K48_RS15410 PF03006 Haemolysin-III related H9K48_RS15415 PF07070 SpoOM protein H9K48_RS15420 PF06288 Protein of unknown function (DUF1040) H9K48_RS15425 PF13746 4Fe-4S dicluster domain H9K48_RS15425 PF12801 4Fe-4S binding domain H9K48_RS15425 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase H9K48_RS15430 PF01636 Phosphotransferase enzyme family H9K48_RS15435 PF01323 DSBA-like thioredoxin domain H9K48_RS15440 PF01553 Acyltransferase H9K48_RS15450 PF13335 Magnesium chelatase, subunit ChlI C-terminal H9K48_RS15450 PF01078 Magnesium chelatase, subunit ChlI H9K48_RS15455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9K48_RS15455 PF00205 Thiamine pyrophosphate enzyme, central domain H9K48_RS15455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9K48_RS15465 PF01063 Amino-transferase class IV H9K48_RS15470 PF00920 Dehydratase family H9K48_RS15475 PF00291 Pyridoxal-phosphate dependent enzyme H9K48_RS15475 PF00585 C-terminal regulatory domain of Threonine dehydratase H9K48_RS15480 PF03466 LysR substrate binding domain H9K48_RS15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS15485 PF07690 Major Facilitator Superfamily H9K48_RS15490 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS15500 PF00132 Bacterial transferase hexapeptide (six repeats) H9K48_RS15500 PF12804 MobA-like NTP transferase domain H9K48_RS15505 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain H9K48_RS15505 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H9K48_RS15510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K48_RS15510 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9K48_RS15515 PF00231 ATP synthase H9K48_RS15520 PF00306 ATP synthase alpha/beta chain, C terminal domain H9K48_RS15520 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9K48_RS15520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K48_RS15525 PF00213 ATP synthase delta (OSCP) subunit H9K48_RS15530 PF00430 ATP synthase B/B' CF(0) H9K48_RS15535 PF00137 ATP synthase subunit C H9K48_RS15540 PF00119 ATP synthase A chain H9K48_RS15545 PF03899 ATP synthase I chain H9K48_RS15550 PF17762 HTH domain found in ParB protein H9K48_RS15550 PF02195 ParB-like nuclease domain H9K48_RS15555 PF13614 AAA domain H9K48_RS15560 PF02527 rRNA small subunit methyltransferase G H9K48_RS15565 PF13932 GidA associated domain H9K48_RS15565 PF01134 Glucose inhibited division protein A H9K48_RS15570 PF00258 Flavodoxin H9K48_RS15575 PF01926 50S ribosome-binding GTPase H9K48_RS15575 PF12631 MnmE helical domain H9K48_RS15575 PF10396 GTP-binding protein TrmE N-terminus H9K48_RS15580 PF02096 60Kd inner membrane protein H9K48_RS15580 PF14849 YidC periplasmic domain H9K48_RS15585 PF01809 Putative membrane protein insertion efficiency factor H9K48_RS15590 PF00825 Ribonuclease P H9K48_RS15595 PF00468 Ribosomal protein L34 H9K48_RS15600 PF00005 ABC transporter H9K48_RS15605 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS15610 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS15615 PF01554 MatE H9K48_RS15620 PF12833 Helix-turn-helix domain H9K48_RS15625 PF00155 Aminotransferase class I and II H9K48_RS15630 PF18030 RimK PreATP-grasp domain H9K48_RS15630 PF08443 RimK-like ATP-grasp domain H9K48_RS15640 PF04076 Bacterial OB fold (BOF) protein H9K48_RS15645 PF07685 CobB/CobQ-like glutamine amidotransferase domain H9K48_RS15655 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS15660 PF03459 TOBE domain H9K48_RS15660 PF00005 ABC transporter H9K48_RS15670 PF00563 EAL domain H9K48_RS15670 PF01590 GAF domain H9K48_RS15670 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS15670 PF00360 Phytochrome region H9K48_RS15680 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS15695 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9K48_RS15695 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9K48_RS15695 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H9K48_RS15700 PF02233 NAD(P) transhydrogenase beta subunit H9K48_RS15710 PF00072 Response regulator receiver domain H9K48_RS15710 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS15725 PF03701 Uncharacterised protein family (UPF0181) H9K48_RS15730 PF00582 Universal stress protein family H9K48_RS15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS15740 PF03466 LysR substrate binding domain H9K48_RS15775 PF03958 Bacterial type II/III secretion system short domain H9K48_RS15775 PF00263 Bacterial type II and III secretion system protein H9K48_RS15805 PF05840 Bacteriophage replication gene A protein (GPA) H9K48_RS15825 PF01253 Translation initiation factor SUI1 H9K48_RS15835 PF07478 D-ala D-ala ligase C-terminus H9K48_RS15835 PF01820 D-ala D-ala ligase N-terminus H9K48_RS15845 PF00583 Acetyltransferase (GNAT) family H9K48_RS15845 PF13380 CoA binding domain H9K48_RS15845 PF13607 Succinyl-CoA ligase like flavodoxin domain H9K48_RS15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS15850 PF03466 LysR substrate binding domain H9K48_RS15855 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS15855 PF04886 PT repeat H9K48_RS15855 PF00593 TonB dependent receptor H9K48_RS15860 PF16363 GDP-mannose 4,6 dehydratase H9K48_RS15865 PF13426 PAS domain H9K48_RS15865 PF08447 PAS fold H9K48_RS15865 PF08448 PAS fold H9K48_RS15865 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS15865 PF00563 EAL domain H9K48_RS15865 PF05231 MASE1 H9K48_RS15870 PF03746 LamB/YcsF family H9K48_RS15875 PF02682 Carboxyltransferase domain, subdomain C and D H9K48_RS15880 PF02626 Carboxyltransferase domain, subdomain A and B H9K48_RS15895 PF00005 ABC transporter H9K48_RS15900 PF13472 GDSL-like Lipase/Acylhydrolase family H9K48_RS15905 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9K48_RS15905 PF07055 Enoyl reductase FAD binding domain H9K48_RS15905 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9K48_RS15910 PF00563 EAL domain H9K48_RS15910 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS15910 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS15910 PF13188 PAS domain H9K48_RS15925 PF00226 DnaJ domain H9K48_RS15925 PF01556 DnaJ C terminal domain H9K48_RS15925 PF00684 DnaJ central domain H9K48_RS15950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS15950 PF12793 Sugar transport-related sRNA regulator N-term H9K48_RS15960 PF03061 Thioesterase superfamily H9K48_RS15975 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K48_RS15980 PF12262 Bacterial virulence factor lipase N-terminal H9K48_RS15995 PF03741 Integral membrane protein TerC family H9K48_RS16000 PF00149 Calcineurin-like phosphoesterase H9K48_RS16000 PF02872 5'-nucleotidase, C-terminal domain H9K48_RS16005 PF11398 Protein of unknown function (DUF2813) H9K48_RS16010 PF06496 Protein of unknown function (DUF1097) H9K48_RS16015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS16015 PF03466 LysR substrate binding domain H9K48_RS16020 PF01226 Formate/nitrite transporter H9K48_RS16025 PF04264 YceI-like domain H9K48_RS16030 PF01292 Prokaryotic cytochrome b561 H9K48_RS16045 PF12792 CSS motif domain associated with EAL H9K48_RS16045 PF00563 EAL domain H9K48_RS16050 PF00271 Helicase conserved C-terminal domain H9K48_RS16050 PF00270 DEAD/DEAH box helicase H9K48_RS16055 PF04336 Acyl carrier protein phosphodiesterase H9K48_RS16060 PF00672 HAMP domain H9K48_RS16060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS16065 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS16070 PF11849 Domain of unknown function (DUF3369) H9K48_RS16085 PF00294 pfkB family carbohydrate kinase H9K48_RS16090 PF01268 Formate--tetrahydrofolate ligase H9K48_RS16095 PF00483 Nucleotidyl transferase H9K48_RS16100 PF06483 Chitinase C H9K48_RS16100 PF00704 Glycosyl hydrolases family 18 H9K48_RS16105 PF12833 Helix-turn-helix domain H9K48_RS16105 PF06719 AraC-type transcriptional regulator N-terminus H9K48_RS16110 PF00465 Iron-containing alcohol dehydrogenase H9K48_RS16120 PF14532 Sigma-54 interaction domain H9K48_RS16120 PF00072 Response regulator receiver domain H9K48_RS16120 PF02954 Bacterial regulatory protein, Fis family H9K48_RS16125 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS16125 PF00672 HAMP domain H9K48_RS16135 PF07690 Major Facilitator Superfamily H9K48_RS16140 PF00224 Pyruvate kinase, barrel domain H9K48_RS16140 PF02887 Pyruvate kinase, alpha/beta domain H9K48_RS16145 PF00005 ABC transporter H9K48_RS16150 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS16155 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS16160 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS16165 PF00989 PAS fold H9K48_RS16165 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS16165 PF01590 GAF domain H9K48_RS16165 PF00563 EAL domain H9K48_RS16180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K48_RS16180 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS16185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K48_RS16185 PF00381 PTS HPr component phosphorylation site H9K48_RS16190 PF00294 pfkB family carbohydrate kinase H9K48_RS16195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K48_RS16195 PF02378 Phosphotransferase system, EIIC H9K48_RS16205 PF00873 AcrB/AcrD/AcrF family H9K48_RS16225 PF01571 Aminomethyltransferase folate-binding domain H9K48_RS16225 PF08669 Glycine cleavage T-protein C-terminal barrel domain H9K48_RS16235 PF00464 Serine hydroxymethyltransferase H9K48_RS16240 PF01597 Glycine cleavage H-protein H9K48_RS16245 PF02347 Glycine cleavage system P-protein H9K48_RS16250 PF02810 SEC-C motif H9K48_RS16250 PF07517 SecA DEAD-like domain H9K48_RS16250 PF01043 SecA preprotein cross-linking domain H9K48_RS16250 PF07516 SecA Wing and Scaffold domain H9K48_RS16275 PF01039 Carboxyl transferase domain H9K48_RS16275 PF17848 Acetyl-coA carboxylase zinc finger domain H9K48_RS16280 PF03466 LysR substrate binding domain H9K48_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS16285 PF02811 PHP domain H9K48_RS16285 PF11490 DNA polymerase III polC-type N-terminus II H9K48_RS16285 PF00929 Exonuclease H9K48_RS16285 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9K48_RS16285 PF14579 Helix-hairpin-helix motif H9K48_RS16285 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9K48_RS16290 PF00664 ABC transporter transmembrane region H9K48_RS16290 PF00005 ABC transporter H9K48_RS16310 PF02253 Phospholipase A1 H9K48_RS16320 PF09278 MerR, DNA binding H9K48_RS16320 PF00376 MerR family regulatory protein H9K48_RS16325 PF01327 Polypeptide deformylase H9K48_RS16355 PF03448 MgtE intracellular N domain H9K48_RS16355 PF00571 CBS domain H9K48_RS16355 PF01769 Divalent cation transporter H9K48_RS16375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS16380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K48_RS16390 PF01757 Acyltransferase family H9K48_RS16400 PF09722 Protein of unknown function (DUF2384) H9K48_RS16405 PF00141 Peroxidase H9K48_RS16410 PF13187 4Fe-4S dicluster domain H9K48_RS16410 PF01645 Conserved region in glutamate synthase H9K48_RS16420 PF12431 Transcriptional regulator H9K48_RS16420 PF00072 Response regulator receiver domain H9K48_RS16425 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain H9K48_RS16425 PF17203 Single cache domain 3 H9K48_RS16425 PF00989 PAS fold H9K48_RS16425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS16430 PF00939 Sodium:sulfate symporter transmembrane region H9K48_RS16435 PF00171 Aldehyde dehydrogenase family H9K48_RS16455 PF00892 EamA-like transporter family H9K48_RS16460 PF00893 Small Multidrug Resistance protein H9K48_RS16465 PF04151 Bacterial pre-peptidase C-terminal domain H9K48_RS16465 PF02868 Thermolysin metallopeptidase, alpha-helical domain H9K48_RS16465 PF01447 Thermolysin metallopeptidase, catalytic domain H9K48_RS16465 PF03413 Peptidase propeptide and YPEB domain H9K48_RS16465 PF07504 Fungalysin/Thermolysin Propeptide Motif H9K48_RS16475 PF01569 PAP2 superfamily H9K48_RS16485 PF00892 EamA-like transporter family H9K48_RS16500 PF00072 Response regulator receiver domain H9K48_RS16500 PF01584 CheW-like domain H9K48_RS16520 PF00072 Response regulator receiver domain H9K48_RS16520 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS16530 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS16535 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS16535 PF00072 Response regulator receiver domain H9K48_RS16540 PF00563 EAL domain H9K48_RS16540 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS16540 PF13188 PAS domain H9K48_RS16540 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS16545 PF00072 Response regulator receiver domain H9K48_RS16545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS16545 PF09456 RcsC Alpha-Beta-Loop (ABL) H9K48_RS16545 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS16555 PF03466 LysR substrate binding domain H9K48_RS16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS16560 PF03466 LysR substrate binding domain H9K48_RS16570 PF00691 OmpA family H9K48_RS16570 PF05736 OprF membrane domain H9K48_RS16605 PF00437 Type II/IV secretion system protein H9K48_RS16620 PF00263 Bacterial type II and III secretion system protein H9K48_RS16620 PF04972 BON domain H9K48_RS16620 PF13629 Pilus formation protein N terminal region H9K48_RS16640 PF03466 LysR substrate binding domain H9K48_RS16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS16645 PF12833 Helix-turn-helix domain H9K48_RS16655 PF01752 Collagenase H9K48_RS16655 PF08453 Peptidase family M9 N-terminal H9K48_RS16655 PF04151 Bacterial pre-peptidase C-terminal domain H9K48_RS16665 PF01926 50S ribosome-binding GTPase H9K48_RS16670 PF00155 Aminotransferase class I and II H9K48_RS16675 PF00072 Response regulator receiver domain H9K48_RS16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS16685 PF00583 Acetyltransferase (GNAT) family H9K48_RS16685 PF00814 Glycoprotease family H9K48_RS16695 PF03606 C4-dicarboxylate anaerobic carrier H9K48_RS16700 PF04011 LemA family H9K48_RS16705 PF01435 Peptidase family M48 H9K48_RS16720 PF18081 Fanconi anemia-associated nuclease SAP domain H9K48_RS16720 PF08774 VRR-NUC domain H9K48_RS16730 PF13186 Iron-sulfur cluster-binding domain H9K48_RS16730 PF04055 Radical SAM superfamily H9K48_RS16745 PF04076 Bacterial OB fold (BOF) protein H9K48_RS16750 PF00781 Diacylglycerol kinase catalytic domain H9K48_RS16755 PF03466 LysR substrate binding domain H9K48_RS16755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS16760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K48_RS16775 PF00092 von Willebrand factor type A domain H9K48_RS16790 PF07726 ATPase family associated with various cellular activities (AAA) H9K48_RS16790 PF17863 AAA lid domain H9K48_RS16795 PF04055 Radical SAM superfamily H9K48_RS16795 PF13186 Iron-sulfur cluster-binding domain H9K48_RS16800 PF00884 Sulfatase H9K48_RS16805 PF03466 LysR substrate binding domain H9K48_RS16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS16815 PF00884 Sulfatase H9K48_RS16820 PF16385 Domain of unknown function H9K48_RS16820 PF00884 Sulfatase H9K48_RS16825 PF00072 Response regulator receiver domain H9K48_RS16825 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS16840 PF01627 Hpt domain H9K48_RS16840 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS16840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS16840 PF00672 HAMP domain H9K48_RS16840 PF00072 Response regulator receiver domain H9K48_RS16845 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K48_RS16850 PF02142 MGS-like domain H9K48_RS16855 PF12462 DNA helicase IV / RNA helicase N terminal H9K48_RS16855 PF00580 UvrD/REP helicase N-terminal domain H9K48_RS16855 PF13361 UvrD-like helicase C-terminal domain H9K48_RS16860 PF12805 FUSC-like inner membrane protein yccS H9K48_RS16890 PF00593 TonB dependent receptor H9K48_RS16890 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS16900 PF13411 MerR HTH family regulatory protein H9K48_RS16905 PF00005 ABC transporter H9K48_RS16910 PF01032 FecCD transport family H9K48_RS16915 PF01032 FecCD transport family H9K48_RS16920 PF01497 Periplasmic binding protein H9K48_RS16940 PF04314 Copper chaperone PCu(A)C H9K48_RS16945 PF00012 Hsp70 protein H9K48_RS16960 PF00676 Dehydrogenase E1 component H9K48_RS16965 PF02780 Transketolase, C-terminal domain H9K48_RS16965 PF02779 Transketolase, pyrimidine binding domain H9K48_RS16970 PF00364 Biotin-requiring enzyme H9K48_RS16970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9K48_RS16970 PF02817 e3 binding domain H9K48_RS16980 PF02798 Glutathione S-transferase, N-terminal domain H9K48_RS16980 PF00043 Glutathione S-transferase, C-terminal domain H9K48_RS16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS16985 PF03466 LysR substrate binding domain H9K48_RS16995 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS17000 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS17005 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS17010 PF00005 ABC transporter H9K48_RS17015 PF03466 LysR substrate binding domain H9K48_RS17015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS17030 PF03466 LysR substrate binding domain H9K48_RS17030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS17035 PF01565 FAD binding domain H9K48_RS17035 PF08031 Berberine and berberine like H9K48_RS17040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K48_RS17050 PF01040 UbiA prenyltransferase family H9K48_RS17060 PF00510 Cytochrome c oxidase subunit III H9K48_RS17065 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K48_RS17070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9K48_RS17070 PF06481 COX Aromatic Rich Motif H9K48_RS17080 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K48_RS17080 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K48_RS17085 PF00378 Enoyl-CoA hydratase/isomerase H9K48_RS17090 PF00378 Enoyl-CoA hydratase/isomerase H9K48_RS17095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K48_RS17095 PF02770 Acyl-CoA dehydrogenase, middle domain H9K48_RS17095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K48_RS17100 PF00171 Aldehyde dehydrogenase family H9K48_RS17105 PF02803 Thiolase, C-terminal domain H9K48_RS17105 PF00108 Thiolase, N-terminal domain H9K48_RS17110 PF09278 MerR, DNA binding H9K48_RS17110 PF00376 MerR family regulatory protein H9K48_RS17115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K48_RS17115 PF02770 Acyl-CoA dehydrogenase, middle domain H9K48_RS17115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K48_RS17120 PF01039 Carboxyl transferase domain H9K48_RS17125 PF00378 Enoyl-CoA hydratase/isomerase H9K48_RS17130 PF00682 HMGL-like H9K48_RS17135 PF10063 Uncharacterized integral membrane protein (DUF2301) H9K48_RS17145 PF08447 PAS fold H9K48_RS17145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS17145 PF13426 PAS domain H9K48_RS17150 PF00871 Acetokinase family H9K48_RS17155 PF00563 EAL domain H9K48_RS17155 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS17155 PF13426 PAS domain H9K48_RS17160 PF03880 DbpA RNA binding domain H9K48_RS17160 PF00270 DEAD/DEAH box helicase H9K48_RS17160 PF00271 Helicase conserved C-terminal domain H9K48_RS17165 PF00575 S1 RNA binding domain H9K48_RS17165 PF00773 RNB domain H9K48_RS17165 PF08206 Ribonuclease B OB domain H9K48_RS17170 PF12833 Helix-turn-helix domain H9K48_RS17180 PF12849 PBP superfamily domain H9K48_RS17185 PF01575 MaoC like domain H9K48_RS17195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS17195 PF03466 LysR substrate binding domain H9K48_RS17200 PF04055 Radical SAM superfamily H9K48_RS17200 PF13186 Iron-sulfur cluster-binding domain H9K48_RS17205 PF00884 Sulfatase H9K48_RS17210 PF03466 LysR substrate binding domain H9K48_RS17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS17220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS17220 PF00672 HAMP domain H9K48_RS17220 PF12729 Four helix bundle sensory module for signal transduction H9K48_RS17225 PF00005 ABC transporter H9K48_RS17230 PF12792 CSS motif domain associated with EAL H9K48_RS17230 PF00563 EAL domain H9K48_RS17250 PF00271 Helicase conserved C-terminal domain H9K48_RS17250 PF00270 DEAD/DEAH box helicase H9K48_RS17255 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9K48_RS17255 PF07683 Cobalamin synthesis protein cobW C-terminal domain H9K48_RS17265 PF01470 Pyroglutamyl peptidase H9K48_RS17275 PF00291 Pyridoxal-phosphate dependent enzyme H9K48_RS17280 PF09905 DNA-binding protein VF530 H9K48_RS17285 PF00270 DEAD/DEAH box helicase H9K48_RS17285 PF00271 Helicase conserved C-terminal domain H9K48_RS17290 PF12843 Putative quorum-sensing-regulated virulence factor H9K48_RS17310 PF01329 Pterin 4 alpha carbinolamine dehydratase H9K48_RS17315 PF00351 Biopterin-dependent aromatic amino acid hydroxylase H9K48_RS17320 PF00501 AMP-binding enzyme H9K48_RS17320 PF13193 AMP-binding enzyme C-terminal domain H9K48_RS17330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS17330 PF03466 LysR substrate binding domain H9K48_RS17355 PF00892 EamA-like transporter family H9K48_RS17370 PF00465 Iron-containing alcohol dehydrogenase H9K48_RS17375 PF07995 Glucose / Sorbosone dehydrogenase H9K48_RS17385 PF00210 Ferritin-like domain H9K48_RS17390 PF00672 HAMP domain H9K48_RS17390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS17390 PF17200 Single Cache domain 2 H9K48_RS17400 PF12704 MacB-like periplasmic core domain H9K48_RS17400 PF00005 ABC transporter H9K48_RS17400 PF02687 FtsX-like permease family H9K48_RS17405 PF02687 FtsX-like permease family H9K48_RS17405 PF00005 ABC transporter H9K48_RS17405 PF12704 MacB-like periplasmic core domain H9K48_RS17420 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS17425 PF08447 PAS fold H9K48_RS17425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS17425 PF13426 PAS domain H9K48_RS17430 PF03889 Alternative ribosome-rescue factor A H9K48_RS17435 PF00313 'Cold-shock' DNA-binding domain H9K48_RS17465 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9K48_RS17465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9K48_RS17470 PF01040 UbiA prenyltransferase family H9K48_RS17475 PF02628 Cytochrome oxidase assembly protein H9K48_RS17495 PF00510 Cytochrome c oxidase subunit III H9K48_RS17500 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 H9K48_RS17505 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9K48_RS17510 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9K48_RS17510 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H9K48_RS17515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9K48_RS17515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9K48_RS17515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9K48_RS17515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9K48_RS17525 PF01810 LysE type translocator H9K48_RS17530 PF12833 Helix-turn-helix domain H9K48_RS17545 PF01557 Fumarylacetoacetate (FAA) hydrolase family H9K48_RS17555 PF00267 Gram-negative porin H9K48_RS17560 PF00892 EamA-like transporter family H9K48_RS17565 PF00462 Glutaredoxin H9K48_RS17575 PF07690 Major Facilitator Superfamily H9K48_RS17580 PF03466 LysR substrate binding domain H9K48_RS17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS17585 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS17585 PF00563 EAL domain H9K48_RS17585 PF08448 PAS fold H9K48_RS17585 PF08447 PAS fold H9K48_RS17590 PF01551 Peptidase family M23 H9K48_RS17590 PF01476 LysM domain H9K48_RS17590 PF08525 Opacity-associated protein A N-terminal motif H9K48_RS17610 PF07670 Nucleoside recognition H9K48_RS17615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS17615 PF02743 Cache domain H9K48_RS17615 PF00672 HAMP domain H9K48_RS17625 PF03222 Tryptophan/tyrosine permease family H9K48_RS17660 PF08240 Alcohol dehydrogenase GroES-like domain H9K48_RS17660 PF00107 Zinc-binding dehydrogenase H9K48_RS17665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K48_RS17665 PF02378 Phosphotransferase system, EIIC H9K48_RS17670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K48_RS17685 PF01758 Sodium Bile acid symporter family H9K48_RS17695 PF01161 Phosphatidylethanolamine-binding protein H9K48_RS17700 PF02567 Phenazine biosynthesis-like protein H9K48_RS17705 PF10282 Lactonase, 7-bladed beta-propeller H9K48_RS17710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS17710 PF00672 HAMP domain H9K48_RS17720 PF00005 ABC transporter H9K48_RS17740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K48_RS17740 PF00384 Molybdopterin oxidoreductase H9K48_RS17740 PF12838 4Fe-4S dicluster domain H9K48_RS17740 PF01568 Molydopterin dinucleotide binding domain H9K48_RS17740 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H9K48_RS17760 PF00873 AcrB/AcrD/AcrF family H9K48_RS17770 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K48_RS17770 PF00970 Oxidoreductase FAD-binding domain H9K48_RS17770 PF00175 Oxidoreductase NAD-binding domain H9K48_RS17780 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS17790 PF13302 Acetyltransferase (GNAT) domain H9K48_RS17800 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K48_RS17805 PF00873 AcrB/AcrD/AcrF family H9K48_RS17810 PF13533 Biotin-lipoyl like H9K48_RS17820 PF00326 Prolyl oligopeptidase family H9K48_RS17820 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K48_RS17825 PF12848 ABC transporter H9K48_RS17825 PF00005 ABC transporter H9K48_RS17825 PF16326 ABC transporter C-terminal domain H9K48_RS17830 PF00582 Universal stress protein family H9K48_RS17835 PF02525 Flavodoxin-like fold H9K48_RS17840 PF00999 Sodium/hydrogen exchanger family H9K48_RS17840 PF02254 TrkA-N domain H9K48_RS17855 PF00128 Alpha amylase, catalytic domain H9K48_RS17865 PF04151 Bacterial pre-peptidase C-terminal domain H9K48_RS17865 PF08453 Peptidase family M9 N-terminal H9K48_RS17865 PF01752 Collagenase H9K48_RS17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS17880 PF03466 LysR substrate binding domain H9K48_RS17885 PF00210 Ferritin-like domain H9K48_RS17890 PF00141 Peroxidase H9K48_RS17910 PF00082 Subtilase family H9K48_RS17915 PF13091 PLD-like domain H9K48_RS17915 PF13087 AAA domain H9K48_RS17935 PF00075 RNase H H9K48_RS17950 PF00239 Resolvase, N terminal domain H9K48_RS17950 PF02796 Helix-turn-helix domain of resolvase H9K48_RS17955 PF00239 Resolvase, N terminal domain H9K48_RS17955 PF07508 Recombinase H9K48_RS17955 PF13408 Recombinase zinc beta ribbon domain H9K48_RS17965 PF00072 Response regulator receiver domain H9K48_RS17965 PF01584 CheW-like domain H9K48_RS17975 PF01243 Pyridoxamine 5'-phosphate oxidase H9K48_RS17980 PF06228 Haem utilisation ChuX/HutX H9K48_RS17985 PF04055 Radical SAM superfamily H9K48_RS17990 PF03544 Gram-negative bacterial TonB protein C-terminal H9K48_RS17995 PF01618 MotA/TolQ/ExbB proton channel family H9K48_RS18000 PF02472 Biopolymer transport protein ExbD/TolR H9K48_RS18010 PF01032 FecCD transport family H9K48_RS18015 PF00005 ABC transporter H9K48_RS18055 PF01467 Cytidylyltransferase-like H9K48_RS18060 PF02540 NAD synthase H9K48_RS18065 PF03473 MOSC domain H9K48_RS18065 PF03473 MOSC domain H9K48_RS18065 PF03476 MOSC N-terminal beta barrel domain H9K48_RS18065 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K48_RS18065 PF03476 MOSC N-terminal beta barrel domain H9K48_RS18065 PF00111 2Fe-2S iron-sulfur cluster binding domain H9K48_RS18070 PF01679 Proteolipid membrane potential modulator H9K48_RS18075 PF01979 Amidohydrolase family H9K48_RS18080 PF05661 Protein of unknown function (DUF808) H9K48_RS18110 PF12833 Helix-turn-helix domain H9K48_RS18110 PF01497 Periplasmic binding protein H9K48_RS18115 PF00155 Aminotransferase class I and II H9K48_RS18140 PF00535 Glycosyl transferase family 2 H9K48_RS18155 PF00270 DEAD/DEAH box helicase H9K48_RS18155 PF00271 Helicase conserved C-terminal domain H9K48_RS18165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18165 PF03466 LysR substrate binding domain H9K48_RS18170 PF03466 LysR substrate binding domain H9K48_RS18170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9K48_RS18185 PF00107 Zinc-binding dehydrogenase H9K48_RS18185 PF08240 Alcohol dehydrogenase GroES-like domain H9K48_RS18200 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9K48_RS18200 PF12833 Helix-turn-helix domain H9K48_RS18205 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H9K48_RS18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18220 PF03466 LysR substrate binding domain H9K48_RS18225 PF00709 Adenylosuccinate synthetase H9K48_RS18230 PF17763 Glutaminase/Asparaginase C-terminal domain H9K48_RS18230 PF00710 Asparaginase, N-terminal H9K48_RS18235 PF03618 Kinase/pyrophosphorylase H9K48_RS18240 PF00391 PEP-utilising enzyme, mobile domain H9K48_RS18240 PF02896 PEP-utilising enzyme, TIM barrel domain H9K48_RS18240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H9K48_RS18255 PF00579 tRNA synthetases class I (W and Y) H9K48_RS18260 PF13416 Bacterial extracellular solute-binding protein H9K48_RS18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18270 PF03466 LysR substrate binding domain H9K48_RS18275 PF13533 Biotin-lipoyl like H9K48_RS18280 PF00873 AcrB/AcrD/AcrF family H9K48_RS18295 PF07694 5TMR of 5TMR-LYT H9K48_RS18295 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS18305 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS18310 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9K48_RS18310 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9K48_RS18310 PF00703 Glycosyl hydrolases family 2 H9K48_RS18310 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 H9K48_RS18315 PF02028 BCCT, betaine/carnitine/choline family transporter H9K48_RS18320 PF07702 UTRA domain H9K48_RS18320 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS18345 PF08402 TOBE domain H9K48_RS18345 PF00005 ABC transporter H9K48_RS18370 PF00873 AcrB/AcrD/AcrF family H9K48_RS18375 PF13533 Biotin-lipoyl like H9K48_RS18380 PF13091 PLD-like domain H9K48_RS18405 PF09278 MerR, DNA binding H9K48_RS18405 PF00376 MerR family regulatory protein H9K48_RS18415 PF03466 LysR substrate binding domain H9K48_RS18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18425 PF13378 Enolase C-terminal domain-like H9K48_RS18425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H9K48_RS18430 PF00679 Elongation factor G C-terminus H9K48_RS18430 PF14492 Elongation Factor G, domain II H9K48_RS18430 PF03764 Elongation factor G, domain IV H9K48_RS18430 PF00009 Elongation factor Tu GTP binding domain H9K48_RS18430 PF03144 Elongation factor Tu domain 2 H9K48_RS18455 PF02001 Protein of unknown function DUF134 H9K48_RS18460 PF17185 NlpE C-terminal OB domain H9K48_RS18460 PF04170 NlpE N-terminal domain H9K48_RS18465 PF06629 MltA-interacting protein MipA H9K48_RS18475 PF00691 OmpA family H9K48_RS18475 PF01389 OmpA-like transmembrane domain H9K48_RS18480 PF03466 LysR substrate binding domain H9K48_RS18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H9K48_RS18505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H9K48_RS18515 PF00857 Isochorismatase family H9K48_RS18525 PF06628 Catalase-related immune-responsive H9K48_RS18525 PF00199 Catalase H9K48_RS18535 PF00455 DeoR C terminal sensor domain H9K48_RS18535 PF08220 DeoR-like helix-turn-helix domain H9K48_RS18540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS18545 PF01641 SelR domain H9K48_RS18545 PF01625 Peptide methionine sulfoxide reductase H9K48_RS18565 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9K48_RS18565 PF07971 Glycosyl hydrolase family 92 H9K48_RS18570 PF07971 Glycosyl hydrolase family 92 H9K48_RS18570 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9K48_RS18580 PF07971 Glycosyl hydrolase family 92 H9K48_RS18580 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9K48_RS18585 PF03060 Nitronate monooxygenase H9K48_RS18590 PF02872 5'-nucleotidase, C-terminal domain H9K48_RS18590 PF00149 Calcineurin-like phosphoesterase H9K48_RS18600 PF08359 YsiA-like protein, C-terminal region H9K48_RS18600 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS18615 PF03466 LysR substrate binding domain H9K48_RS18615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18620 PF01810 LysE type translocator H9K48_RS18635 PF00118 TCP-1/cpn60 chaperonin family H9K48_RS18640 PF00166 Chaperonin 10 Kd subunit H9K48_RS18645 PF00581 Rhodanese-like domain H9K48_RS18670 PF01070 FMN-dependent dehydrogenase H9K48_RS18690 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS18695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS18695 PF00460 Flagella basal body rod protein H9K48_RS18700 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9K48_RS18700 PF10135 Rod binding protein H9K48_RS18705 PF02119 Flagellar P-ring protein H9K48_RS18710 PF02107 Flagellar L-ring protein H9K48_RS18715 PF00460 Flagella basal body rod protein H9K48_RS18715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS18720 PF00460 Flagella basal body rod protein H9K48_RS18720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS18725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS18725 PF07559 Flagellar basal body protein FlaE H9K48_RS18725 PF00460 Flagella basal body rod protein H9K48_RS18730 PF03963 Flagellar hook capping protein - N-terminal region H9K48_RS18730 PF13861 FlgD Tudor-like domain H9K48_RS18730 PF13860 FlgD Ig-like domain H9K48_RS18735 PF00460 Flagella basal body rod protein H9K48_RS18735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9K48_RS18740 PF00460 Flagella basal body rod protein H9K48_RS18760 PF01464 Transglycosylase SLT domain H9K48_RS18765 PF00133 tRNA synthetases class I (I, L, M and V) H9K48_RS18765 PF08264 Anticodon-binding domain of tRNA H9K48_RS18785 PF03315 Serine dehydratase beta chain H9K48_RS18785 PF03313 Serine dehydratase alpha chain H9K48_RS18790 PF00854 POT family H9K48_RS18800 PF03466 LysR substrate binding domain H9K48_RS18800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18810 PF03466 LysR substrate binding domain H9K48_RS18815 PF00691 OmpA family H9K48_RS18815 PF01389 OmpA-like transmembrane domain H9K48_RS18820 PF18027 Cytosolic carboxypeptidase N-terminal domain H9K48_RS18820 PF00246 Zinc carboxypeptidase H9K48_RS18825 PF01266 FAD dependent oxidoreductase H9K48_RS18830 PF04393 Protein of unknown function (DUF535) H9K48_RS18845 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS18845 PF07702 UTRA domain H9K48_RS18850 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS18855 PF00005 ABC transporter H9K48_RS18870 PF00266 Aminotransferase class-V H9K48_RS18875 PF00202 Aminotransferase class-III H9K48_RS18880 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS18885 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS18890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K48_RS18900 PF03611 PTS system sugar-specific permease component H9K48_RS18910 PF00082 Subtilase family H9K48_RS18910 PF05922 Peptidase inhibitor I9 H9K48_RS18915 PF00657 GDSL-like Lipase/Acylhydrolase H9K48_RS18920 PF02321 Outer membrane efflux protein H9K48_RS18925 PF00005 ABC transporter H9K48_RS18925 PF02687 FtsX-like permease family H9K48_RS18925 PF12704 MacB-like periplasmic core domain H9K48_RS18930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS18935 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9K48_RS18940 PF00194 Eukaryotic-type carbonic anhydrase H9K48_RS18945 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9K48_RS18960 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS18965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS18965 PF03466 LysR substrate binding domain H9K48_RS19000 PF14602 Hexapeptide repeat of succinyl-transferase H9K48_RS19000 PF12464 Maltose acetyltransferase H9K48_RS19005 PF02566 OsmC-like protein H9K48_RS19010 PF01641 SelR domain H9K48_RS19010 PF01625 Peptide methionine sulfoxide reductase H9K48_RS19020 PF00919 Uncharacterized protein family UPF0004 H9K48_RS19020 PF04055 Radical SAM superfamily H9K48_RS19025 PF04244 Deoxyribodipyrimidine photo-lyase-related protein H9K48_RS19030 PF00875 DNA photolyase H9K48_RS19030 PF03441 FAD binding domain of DNA photolyase H9K48_RS19035 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS19050 PF00672 HAMP domain H9K48_RS19050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS19050 PF12729 Four helix bundle sensory module for signal transduction H9K48_RS19055 PF05230 MASE2 domain H9K48_RS19055 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS19060 PF13532 2OG-Fe(II) oxygenase superfamily H9K48_RS19070 PF07662 Na+ dependent nucleoside transporter C-terminus H9K48_RS19070 PF01773 Na+ dependent nucleoside transporter N-terminus H9K48_RS19070 PF07670 Nucleoside recognition H9K48_RS19085 PF01212 Beta-eliminating lyase H9K48_RS19095 PF01266 FAD dependent oxidoreductase H9K48_RS19110 PF05525 Branched-chain amino acid transport protein H9K48_RS19115 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS19115 PF08448 PAS fold H9K48_RS19120 PF02954 Bacterial regulatory protein, Fis family H9K48_RS19120 PF00158 Sigma-54 interaction domain H9K48_RS19120 PF00072 Response regulator receiver domain H9K48_RS19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS19125 PF02743 Cache domain H9K48_RS19125 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS19130 PF00232 Glycosyl hydrolase family 1 H9K48_RS19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS19150 PF03466 LysR substrate binding domain H9K48_RS19155 PF08443 RimK-like ATP-grasp domain H9K48_RS19155 PF18030 RimK PreATP-grasp domain H9K48_RS19160 PF18030 RimK PreATP-grasp domain H9K48_RS19160 PF08443 RimK-like ATP-grasp domain H9K48_RS19165 PF00753 Metallo-beta-lactamase superfamily H9K48_RS19170 PF17810 Arginine decarboxylase helical bundle domain H9K48_RS19170 PF17944 Arginine decarboxylase C-terminal helical extension H9K48_RS19170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K48_RS19175 PF00491 Arginase family H9K48_RS19180 PF07690 Major Facilitator Superfamily H9K48_RS19185 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K48_RS19185 PF00326 Prolyl oligopeptidase family H9K48_RS19200 PF00950 ABC 3 transport family H9K48_RS19205 PF00005 ABC transporter H9K48_RS19210 PF01297 Zinc-uptake complex component A periplasmic H9K48_RS19250 PF02472 Biopolymer transport protein ExbD/TolR H9K48_RS19255 PF01618 MotA/TolQ/ExbB proton channel family H9K48_RS19260 PF01618 MotA/TolQ/ExbB proton channel family H9K48_RS19270 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS19270 PF00593 TonB dependent receptor H9K48_RS19275 PF16750 Sensor domain of 2-component histidine kinase H9K48_RS19275 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS19275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS19275 PF00672 HAMP domain H9K48_RS19280 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS19280 PF00072 Response regulator receiver domain H9K48_RS19285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9K48_RS19285 PF00056 lactate/malate dehydrogenase, NAD binding domain H9K48_RS19290 PF03009 Glycerophosphoryl diester phosphodiesterase family H9K48_RS19300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9K48_RS19300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9K48_RS19305 PF10928 Protein of unknown function (DUF2810) H9K48_RS19355 PF04013 Putative SAM-dependent RNA methyltransferase H9K48_RS19360 PF01523 Putative modulator of DNA gyrase H9K48_RS19365 PF01523 Putative modulator of DNA gyrase H9K48_RS19370 PF08543 Phosphomethylpyrimidine kinase H9K48_RS19375 PF00005 ABC transporter H9K48_RS19380 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS19385 PF09084 NMT1/THI5 like H9K48_RS19390 PF03070 TENA/THI-4/PQQC family H9K48_RS19395 PF02110 Hydroxyethylthiazole kinase family H9K48_RS19400 PF02581 Thiamine monophosphate synthase H9K48_RS19410 PF00384 Molybdopterin oxidoreductase H9K48_RS19410 PF18364 Molybdopterin oxidoreductase N-terminal domain H9K48_RS19410 PF01568 Molydopterin dinucleotide binding domain H9K48_RS19415 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K48_RS19440 PF00583 Acetyltransferase (GNAT) family H9K48_RS19460 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS19460 PF00155 Aminotransferase class I and II H9K48_RS19465 PF02595 Glycerate kinase family H9K48_RS19470 PF02447 GntP family permease H9K48_RS19475 PF13556 PucR C-terminal helix-turn-helix domain H9K48_RS19475 PF17853 GGDEF-like domain H9K48_RS19475 PF05651 Putative sugar diacid recognition H9K48_RS19500 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS19515 PF03466 LysR substrate binding domain H9K48_RS19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS19525 PF03466 LysR substrate binding domain H9K48_RS19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS19530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS19535 PF01661 Macro domain H9K48_RS19540 PF01204 Trehalase H9K48_RS19550 PF12706 Beta-lactamase superfamily domain H9K48_RS19560 PF07690 Major Facilitator Superfamily H9K48_RS19565 PF13533 Biotin-lipoyl like H9K48_RS19570 PF03922 OmpW family H9K48_RS19575 PF13599 Pentapeptide repeats (9 copies) H9K48_RS19590 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9K48_RS19590 PF18416 N-acetylglucosamine binding protein domain 2 H9K48_RS19595 PF01037 Lrp/AsnC ligand binding domain H9K48_RS19600 PF01810 LysE type translocator H9K48_RS19605 PF08021 Siderophore-interacting FAD-binding domain H9K48_RS19605 PF04954 Siderophore-interacting protein H9K48_RS19610 PF14583 Oligogalacturonate lyase H9K48_RS19620 PF13229 Right handed beta helix region H9K48_RS19635 PF01081 KDPG and KHG aldolase H9K48_RS19640 PF00294 pfkB family carbohydrate kinase H9K48_RS19655 PF07883 Cupin domain H9K48_RS19660 PF10688 Bacterial inner membrane protein H9K48_RS19670 PF09339 IclR helix-turn-helix domain H9K48_RS19670 PF01614 Bacterial transcriptional regulator H9K48_RS19685 PF03466 LysR substrate binding domain H9K48_RS19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS19690 PF00797 N-acetyltransferase H9K48_RS19695 PF08240 Alcohol dehydrogenase GroES-like domain H9K48_RS19695 PF00107 Zinc-binding dehydrogenase H9K48_RS19700 PF00756 Putative esterase H9K48_RS19710 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS19710 PF17152 Periplasmic sensor domain H9K48_RS19725 PF03466 LysR substrate binding domain H9K48_RS19725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS19740 PF00849 RNA pseudouridylate synthase H9K48_RS19745 PF01554 MatE H9K48_RS19750 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS19750 PF00563 EAL domain H9K48_RS19760 PF06865 Pyrimidine/purine nucleoside phosphorylase H9K48_RS19770 PF00704 Glycosyl hydrolases family 18 H9K48_RS19770 PF08329 Chitinase A, N-terminal domain H9K48_RS19790 PF03600 Citrate transporter H9K48_RS19800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9K48_RS19810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9K48_RS19810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H9K48_RS19815 PF06029 AlkA N-terminal domain H9K48_RS19815 PF00730 HhH-GPD superfamily base excision DNA repair protein H9K48_RS19825 PF07681 DoxX H9K48_RS19830 PF02678 Pirin H9K48_RS19830 PF17954 Quercetinase C-terminal cupin domain H9K48_RS19835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS19835 PF03466 LysR substrate binding domain H9K48_RS19850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9K48_RS19860 PF03616 Sodium/glutamate symporter H9K48_RS19865 PF00155 Aminotransferase class I and II H9K48_RS19865 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS19870 PF00005 ABC transporter H9K48_RS19880 PF03616 Sodium/glutamate symporter H9K48_RS19885 PF00132 Bacterial transferase hexapeptide (six repeats) H9K48_RS19900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS19900 PF00672 HAMP domain H9K48_RS19900 PF17200 Single Cache domain 2 H9K48_RS19905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9K48_RS19915 PF00072 Response regulator receiver domain H9K48_RS19915 PF04397 LytTr DNA-binding domain H9K48_RS19920 PF06580 Histidine kinase H9K48_RS19920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS19920 PF13492 GAF domain H9K48_RS19920 PF07694 5TMR of 5TMR-LYT H9K48_RS19940 PF00005 ABC transporter H9K48_RS19950 PF01098 Cell cycle protein H9K48_RS19955 PF01709 Transcriptional regulator H9K48_RS19965 PF00072 Response regulator receiver domain H9K48_RS19965 PF01627 Hpt domain H9K48_RS19965 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS19965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS19965 PF00672 HAMP domain H9K48_RS19965 PF17149 Periplasmic sensor domain found in signal transduction proteins H9K48_RS19975 PF08719 Domain of unknown function (DUF1768) H9K48_RS19975 PF00925 GTP cyclohydrolase II H9K48_RS19985 PF00005 ABC transporter H9K48_RS19985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS19990 PF00005 ABC transporter H9K48_RS19990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS20005 PF13614 AAA domain H9K48_RS20005 PF18607 ParA helix turn helix domain H9K48_RS20010 PF08775 ParB family H9K48_RS20010 PF02195 ParB-like nuclease domain H9K48_RS20015 PF05127 Helicase H9K48_RS20015 PF13718 GNAT acetyltransferase 2 H9K48_RS20025 PF00132 Bacterial transferase hexapeptide (six repeats) H9K48_RS20030 PF03466 LysR substrate binding domain H9K48_RS20030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS20035 PF03575 Peptidase family S51 H9K48_RS20040 PF00267 Gram-negative porin H9K48_RS20045 PF00367 phosphotransferase system, EIIB H9K48_RS20045 PF02378 Phosphotransferase system, EIIC H9K48_RS20050 PF01380 SIS domain H9K48_RS20055 PF01380 SIS domain H9K48_RS20055 PF01418 Helix-turn-helix domain, rpiR family H9K48_RS20060 PF00246 Zinc carboxypeptidase H9K48_RS20065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9K48_RS20070 PF03358 NADPH-dependent FMN reductase H9K48_RS20080 PF03412 Peptidase C39 family H9K48_RS20080 PF00005 ABC transporter H9K48_RS20080 PF00664 ABC transporter transmembrane region H9K48_RS20095 PF00529 HlyD membrane-fusion protein of T1SS H9K48_RS20100 PF02954 Bacterial regulatory protein, Fis family H9K48_RS20100 PF00072 Response regulator receiver domain H9K48_RS20100 PF00158 Sigma-54 interaction domain H9K48_RS20105 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS20105 PF02743 Cache domain H9K48_RS20105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS20110 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H9K48_RS20110 PF01243 Pyridoxamine 5'-phosphate oxidase H9K48_RS20120 PF12833 Helix-turn-helix domain H9K48_RS20125 PF00171 Aldehyde dehydrogenase family H9K48_RS20125 PF01619 Proline dehydrogenase H9K48_RS20125 PF14850 DNA-binding domain of Proline dehydrogenase H9K48_RS20125 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H9K48_RS20135 PF00474 Sodium:solute symporter family H9K48_RS20170 PF01037 Lrp/AsnC ligand binding domain H9K48_RS20180 PF00664 ABC transporter transmembrane region H9K48_RS20180 PF00005 ABC transporter H9K48_RS20190 PF06719 AraC-type transcriptional regulator N-terminus H9K48_RS20190 PF12833 Helix-turn-helix domain H9K48_RS20205 PF10688 Bacterial inner membrane protein H9K48_RS20210 PF01081 KDPG and KHG aldolase H9K48_RS20215 PF00294 pfkB family carbohydrate kinase H9K48_RS20220 PF02614 Glucuronate isomerase H9K48_RS20225 PF01232 Mannitol dehydrogenase Rossmann domain H9K48_RS20225 PF08125 Mannitol dehydrogenase C-terminal domain H9K48_RS20230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9K48_RS20235 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9K48_RS20240 PF03480 Bacterial extracellular solute-binding protein, family 7 H9K48_RS20245 PF07729 FCD domain H9K48_RS20245 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS20250 PF03786 D-mannonate dehydratase (UxuA) H9K48_RS20255 PF00270 DEAD/DEAH box helicase H9K48_RS20255 PF00271 Helicase conserved C-terminal domain H9K48_RS20260 PF03473 MOSC domain H9K48_RS20260 PF03475 3-alpha domain H9K48_RS20275 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9K48_RS20275 PF02056 Family 4 glycosyl hydrolase H9K48_RS20280 PF03466 LysR substrate binding domain H9K48_RS20280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS20285 PF00672 HAMP domain H9K48_RS20285 PF02743 Cache domain H9K48_RS20285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS20295 PF04542 Sigma-70 region 2 H9K48_RS20295 PF08281 Sigma-70, region 4 H9K48_RS20300 PF01965 DJ-1/PfpI family H9K48_RS20300 PF12833 Helix-turn-helix domain H9K48_RS20305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS20305 PF03466 LysR substrate binding domain H9K48_RS20320 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS20320 PF13192 Thioredoxin domain H9K48_RS20325 PF00578 AhpC/TSA family H9K48_RS20325 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9K48_RS20330 PF01047 MarR family H9K48_RS20335 PF02566 OsmC-like protein H9K48_RS20350 PF02311 AraC-like ligand binding domain H9K48_RS20350 PF12833 Helix-turn-helix domain H9K48_RS20360 PF02610 L-arabinose isomerase H9K48_RS20360 PF11762 L-arabinose isomerase C-terminal domain H9K48_RS20365 PF00596 Class II Aldolase and Adducin N-terminal domain H9K48_RS20370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H9K48_RS20370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H9K48_RS20375 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9K48_RS20380 PF00005 ABC transporter H9K48_RS20385 PF02653 Branched-chain amino acid transport system / permease component H9K48_RS20390 PF01136 Peptidase family U32 H9K48_RS20400 PF02378 Phosphotransferase system, EIIC H9K48_RS20400 PF00367 phosphotransferase system, EIIB H9K48_RS20405 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS20405 PF00072 Response regulator receiver domain H9K48_RS20410 PF08521 Two-component sensor kinase N-terminal H9K48_RS20410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS20410 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS20415 PF01547 Bacterial extracellular solute-binding protein H9K48_RS20420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9K48_RS20420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9K48_RS20425 PF06276 Ferric iron reductase FhuF-like transporter H9K48_RS20425 PF04183 IucA / IucC family H9K48_RS20430 PF07690 Major Facilitator Superfamily H9K48_RS20435 PF06276 Ferric iron reductase FhuF-like transporter H9K48_RS20435 PF04183 IucA / IucC family H9K48_RS20440 PF02655 ATP-grasp domain H9K48_RS20440 PF00206 Lyase H9K48_RS20445 PF00593 TonB dependent receptor H9K48_RS20445 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS20450 PF00593 TonB dependent receptor H9K48_RS20450 PF07660 Secretin and TonB N terminus short domain H9K48_RS20450 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS20455 PF01497 Periplasmic binding protein H9K48_RS20460 PF01032 FecCD transport family H9K48_RS20465 PF01032 FecCD transport family H9K48_RS20470 PF00005 ABC transporter H9K48_RS20475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS20475 PF17200 Single Cache domain 2 H9K48_RS20475 PF00672 HAMP domain H9K48_RS20480 PF00675 Insulinase (Peptidase family M16) H9K48_RS20480 PF05193 Peptidase M16 inactive domain H9K48_RS20490 PF01551 Peptidase family M23 H9K48_RS20490 PF04225 Opacity-associated protein A LysM-like domain H9K48_RS20500 PF07690 Major Facilitator Superfamily H9K48_RS20510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K48_RS20510 PF00128 Alpha amylase, catalytic domain H9K48_RS20515 PF02264 LamB porin H9K48_RS20530 PF00128 Alpha amylase, catalytic domain H9K48_RS20530 PF02903 Alpha amylase, N-terminal ig-like domain H9K48_RS20535 PF04231 Endonuclease I H9K48_RS20540 PF17967 Pullulanase N2 domain H9K48_RS20540 PF11852 Domain of unknown function (DUF3372) H9K48_RS20540 PF18494 Pullulanase Ins domain H9K48_RS20540 PF03714 Bacterial pullanase-associated domain H9K48_RS20540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K48_RS20555 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9K48_RS20555 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9K48_RS20555 PF01276 Orn/Lys/Arg decarboxylase, major domain H9K48_RS20560 PF13520 Amino acid permease H9K48_RS20570 PF08543 Phosphomethylpyrimidine kinase H9K48_RS20580 PF00375 Sodium:dicarboxylate symporter family H9K48_RS20585 PF03193 RsgA GTPase H9K48_RS20590 PF00367 phosphotransferase system, EIIB H9K48_RS20590 PF02378 Phosphotransferase system, EIIC H9K48_RS20600 PF02630 SCO1/SenC H9K48_RS20615 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS20615 PF17874 MalT-like TPR region H9K48_RS20620 PF00343 Carbohydrate phosphorylase H9K48_RS20625 PF02446 4-alpha-glucanotransferase H9K48_RS20630 PF00128 Alpha amylase, catalytic domain H9K48_RS20630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9K48_RS20630 PF02806 Alpha amylase, C-terminal all-beta domain H9K48_RS20635 PF00912 Transglycosylase H9K48_RS20640 PF00128 Alpha amylase, catalytic domain H9K48_RS20655 PF07670 Nucleoside recognition H9K48_RS20660 PF07670 Nucleoside recognition H9K48_RS20665 PF07687 Peptidase dimerisation domain H9K48_RS20665 PF01546 Peptidase family M20/M25/M40 H9K48_RS20670 PF06803 Protein of unknown function (DUF1232) H9K48_RS20675 PF00375 Sodium:dicarboxylate symporter family H9K48_RS20685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS20685 PF03466 LysR substrate binding domain H9K48_RS20690 PF08803 Putative mono-oxygenase ydhR H9K48_RS20700 PF13614 AAA domain H9K48_RS20700 PF13807 G-rich domain on putative tyrosine kinase H9K48_RS20700 PF02706 Chain length determinant protein H9K48_RS20705 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9K48_RS20710 PF18412 Outer-membrane lipoprotein Wza C-terminal domain H9K48_RS20710 PF02563 Polysaccharide biosynthesis/export protein H9K48_RS20710 PF10531 SLBB domain H9K48_RS20715 PF00881 Nitroreductase family H9K48_RS20720 PF01914 MarC family integral membrane protein H9K48_RS20725 PF01734 Patatin-like phospholipase H9K48_RS20730 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9K48_RS20730 PF18416 N-acetylglucosamine binding protein domain 2 H9K48_RS20735 PF17773 UPF0176 acylphosphatase like domain H9K48_RS20735 PF00581 Rhodanese-like domain H9K48_RS20745 PF00561 alpha/beta hydrolase fold H9K48_RS20750 PF00768 D-alanyl-D-alanine carboxypeptidase H9K48_RS20750 PF07943 Penicillin-binding protein 5, C-terminal domain H9K48_RS20755 PF00686 Starch binding domain H9K48_RS20755 PF00128 Alpha amylase, catalytic domain H9K48_RS20765 PF00881 Nitroreductase family H9K48_RS20775 PF03466 LysR substrate binding domain H9K48_RS20775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS20780 PF09905 DNA-binding protein VF530 H9K48_RS20790 PF00175 Oxidoreductase NAD-binding domain H9K48_RS20790 PF00970 Oxidoreductase FAD-binding domain H9K48_RS20800 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9K48_RS20805 PF01594 AI-2E family transporter H9K48_RS20815 PF13533 Biotin-lipoyl like H9K48_RS20835 PF00892 EamA-like transporter family H9K48_RS20840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS20840 PF03466 LysR substrate binding domain H9K48_RS20845 PF07690 Major Facilitator Superfamily H9K48_RS20855 PF00583 Acetyltransferase (GNAT) family H9K48_RS20865 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9K48_RS20870 PF04055 Radical SAM superfamily H9K48_RS20875 PF02901 Pyruvate formate lyase-like H9K48_RS20875 PF01228 Glycine radical H9K48_RS20910 PF08000 Bacterial PH domain H9K48_RS20920 PF00691 OmpA family H9K48_RS20920 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9K48_RS20925 PF01618 MotA/TolQ/ExbB proton channel family H9K48_RS20930 PF04542 Sigma-70 region 2 H9K48_RS20930 PF04545 Sigma-70, region 4 H9K48_RS20935 PF03748 Flagellar basal body-associated protein FliL H9K48_RS20950 PF02561 Flagellar protein FliS H9K48_RS20955 PF07195 Flagellar hook-associated protein 2 C-terminus H9K48_RS20955 PF02465 Flagellar hook-associated protein 2 N-terminus H9K48_RS20955 PF07196 Flagellin hook IN motif H9K48_RS20965 PF00700 Bacterial flagellin C-terminal helical region H9K48_RS20965 PF00669 Bacterial flagellin N-terminal helical region H9K48_RS20975 PF00771 FHIPEP family H9K48_RS20980 PF01312 FlhB HrpN YscU SpaS Family H9K48_RS20985 PF01311 Bacterial export proteins, family 1 H9K48_RS20990 PF01313 Bacterial export proteins, family 3 H9K48_RS20995 PF00813 FliP family H9K48_RS21000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9K48_RS21015 PF02954 Bacterial regulatory protein, Fis family H9K48_RS21015 PF00158 Sigma-54 interaction domain H9K48_RS21015 PF00072 Response regulator receiver domain H9K48_RS21020 PF02049 Flagellar hook-basal body complex protein FliE H9K48_RS21025 PF08345 Flagellar M-ring protein C-terminal H9K48_RS21025 PF01514 Secretory protein of YscJ/FliF family H9K48_RS21030 PF14841 FliG middle domain H9K48_RS21030 PF14842 FliG N-terminal domain H9K48_RS21030 PF01706 FliG C-terminal domain H9K48_RS21040 PF18269 T3SS EscN ATPase C-terminal domain H9K48_RS21040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9K48_RS21055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS21055 PF03466 LysR substrate binding domain H9K48_RS21090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9K48_RS21095 PF03466 LysR substrate binding domain H9K48_RS21095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS21115 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS21115 PF00072 Response regulator receiver domain H9K48_RS21120 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS21120 PF16736 Single Cache-like H9K48_RS21120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS21120 PF00989 PAS fold H9K48_RS21125 PF00080 Copper/zinc superoxide dismutase (SODC) H9K48_RS21130 PF00266 Aminotransferase class-V H9K48_RS21135 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9K48_RS21140 PF00563 EAL domain H9K48_RS21140 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS21140 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS21145 PF00155 Aminotransferase class I and II H9K48_RS21150 PF08240 Alcohol dehydrogenase GroES-like domain H9K48_RS21150 PF00107 Zinc-binding dehydrogenase H9K48_RS21180 PF00194 Eukaryotic-type carbonic anhydrase H9K48_RS21185 PF00924 Mechanosensitive ion channel H9K48_RS21195 PF01070 FMN-dependent dehydrogenase H9K48_RS21200 PF02652 L-lactate permease H9K48_RS21205 PF03466 LysR substrate binding domain H9K48_RS21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS21210 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K48_RS21210 PF00326 Prolyl oligopeptidase family H9K48_RS21215 PF00005 ABC transporter H9K48_RS21215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9K48_RS21225 PF13654 AAA domain H9K48_RS21225 PF05362 Lon protease (S16) C-terminal proteolytic domain H9K48_RS21230 PF00672 HAMP domain H9K48_RS21230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS21235 PF12945 Flagellar protein YcgR H9K48_RS21235 PF07238 PilZ domain H9K48_RS21250 PF00583 Acetyltransferase (GNAT) family H9K48_RS21255 PF12800 4Fe-4S binding domain H9K48_RS21255 PF12838 4Fe-4S dicluster domain H9K48_RS21260 PF13237 4Fe-4S dicluster domain H9K48_RS21260 PF12801 4Fe-4S binding domain H9K48_RS21275 PF00005 ABC transporter H9K48_RS21275 PF12558 ATP-binding cassette cobalt transporter H9K48_RS21280 PF07155 ECF-type riboflavin transporter, S component H9K48_RS21285 PF00529 HlyD membrane-fusion protein of T1SS H9K48_RS21285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS21290 PF11742 Protein of unknown function (DUF3302) H9K48_RS21295 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS21310 PF01048 Phosphorylase superfamily H9K48_RS21315 PF08349 Protein of unknown function (DUF1722) H9K48_RS21320 PF13411 MerR HTH family regulatory protein H9K48_RS21325 PF03441 FAD binding domain of DNA photolyase H9K48_RS21325 PF00875 DNA photolyase H9K48_RS21330 PF03734 L,D-transpeptidase catalytic domain H9K48_RS21330 PF01476 LysM domain H9K48_RS21330 PF17969 L,D-transpeptidase C-terminal domain H9K48_RS21340 PF00271 Helicase conserved C-terminal domain H9K48_RS21340 PF00270 DEAD/DEAH box helicase H9K48_RS21345 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9K48_RS21345 PF00326 Prolyl oligopeptidase family H9K48_RS21350 PF00593 TonB dependent receptor H9K48_RS21350 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS21370 PF00672 HAMP domain H9K48_RS21370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS21375 PF12849 PBP superfamily domain H9K48_RS21380 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS21385 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS21390 PF00005 ABC transporter H9K48_RS21410 PF07584 Aerotolerance regulator N-terminal H9K48_RS21410 PF13519 von Willebrand factor type A domain H9K48_RS21415 PF13519 von Willebrand factor type A domain H9K48_RS21425 PF01882 Protein of unknown function DUF58 H9K48_RS21430 PF17863 AAA lid domain H9K48_RS21430 PF07726 ATPase family associated with various cellular activities (AAA) H9K48_RS21435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS21435 PF02743 Cache domain H9K48_RS21435 PF00672 HAMP domain H9K48_RS21445 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS21450 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS21460 PF00005 ABC transporter H9K48_RS21460 PF00664 ABC transporter transmembrane region H9K48_RS21465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS21465 PF00529 HlyD membrane-fusion protein of T1SS H9K48_RS21480 PF00691 OmpA family H9K48_RS21480 PF01389 OmpA-like transmembrane domain H9K48_RS21490 PF01032 FecCD transport family H9K48_RS21495 PF01497 Periplasmic binding protein H9K48_RS21500 PF00005 ABC transporter H9K48_RS21505 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS21505 PF00593 TonB dependent receptor H9K48_RS21510 PF00664 ABC transporter transmembrane region H9K48_RS21510 PF00005 ABC transporter H9K48_RS21515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS21515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS21515 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS21515 PF02702 Osmosensitive K+ channel His kinase sensor domain H9K48_RS21515 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS21515 PF13493 Domain of unknown function (DUF4118) H9K48_RS21515 PF02702 Osmosensitive K+ channel His kinase sensor domain H9K48_RS21515 PF13493 Domain of unknown function (DUF4118) H9K48_RS21520 PF00072 Response regulator receiver domain H9K48_RS21520 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS21525 PF02080 TrkA-C domain H9K48_RS21525 PF02254 TrkA-N domain H9K48_RS21530 PF02386 Cation transport protein H9K48_RS21535 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS21535 PF00563 EAL domain H9K48_RS21535 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS21540 PF00127 Copper binding proteins, plastocyanin/azurin family H9K48_RS21545 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS21555 PF01238 Phosphomannose isomerase type I H9K48_RS21560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K48_RS21560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9K48_RS21565 PF12833 Helix-turn-helix domain H9K48_RS21575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9K48_RS21585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K48_RS21585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K48_RS21590 PF06628 Catalase-related immune-responsive H9K48_RS21590 PF00199 Catalase H9K48_RS21595 PF13417 Glutathione S-transferase, N-terminal domain H9K48_RS21600 PF00107 Zinc-binding dehydrogenase H9K48_RS21600 PF16884 N-terminal domain of oxidoreductase H9K48_RS21605 PF16925 Tetracyclin repressor-like, C-terminal domain H9K48_RS21605 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS21610 PF04266 ASCH domain H9K48_RS21640 PF13439 Glycosyltransferase Family 4 H9K48_RS21640 PF00534 Glycosyl transferases group 1 H9K48_RS21650 PF13614 AAA domain H9K48_RS21650 PF02706 Chain length determinant protein H9K48_RS21650 PF13807 G-rich domain on putative tyrosine kinase H9K48_RS21665 PF02397 Bacterial sugar transferase H9K48_RS21670 PF00005 ABC transporter H9K48_RS21670 PF08402 TOBE domain H9K48_RS21675 PF01547 Bacterial extracellular solute-binding protein H9K48_RS21680 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS21680 PF14785 Maltose transport system permease protein MalF P2 domain H9K48_RS21685 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS21735 PF01872 RibD C-terminal domain H9K48_RS21740 PF02909 Tetracyclin repressor-like, C-terminal domain H9K48_RS21740 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS21745 PF02798 Glutathione S-transferase, N-terminal domain H9K48_RS21750 PF00768 D-alanyl-D-alanine carboxypeptidase H9K48_RS21750 PF07943 Penicillin-binding protein 5, C-terminal domain H9K48_RS21765 PF08534 Redoxin H9K48_RS21765 PF00462 Glutaredoxin H9K48_RS21770 PF00962 Adenosine/AMP deaminase H9K48_RS21785 PF00313 'Cold-shock' DNA-binding domain H9K48_RS21790 PF02678 Pirin H9K48_RS21790 PF05726 Pirin C-terminal cupin domain H9K48_RS21795 PF01734 Patatin-like phospholipase H9K48_RS21805 PF01047 MarR family H9K48_RS21830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9K48_RS21835 PF08019 Phosphoethanolamine transferase EptA/EptB H9K48_RS21835 PF00884 Sulfatase H9K48_RS21840 PF01219 Prokaryotic diacylglycerol kinase H9K48_RS21850 PF00672 HAMP domain H9K48_RS21850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS21850 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS21855 PF00072 Response regulator receiver domain H9K48_RS21855 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS21860 PF00106 short chain dehydrogenase H9K48_RS21875 PF01323 DSBA-like thioredoxin domain H9K48_RS21890 PF00255 Glutathione peroxidase H9K48_RS21895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9K48_RS21905 PF07690 Major Facilitator Superfamily H9K48_RS21915 PF01966 HD domain H9K48_RS21925 PF07969 Amidohydrolase family H9K48_RS21930 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H9K48_RS21935 PF00571 CBS domain H9K48_RS21935 PF01769 Divalent cation transporter H9K48_RS21935 PF03448 MgtE intracellular N domain H9K48_RS21940 PF03109 ABC1 family H9K48_RS21950 PF00155 Aminotransferase class I and II H9K48_RS21950 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS21955 PF13520 Amino acid permease H9K48_RS21960 PF01037 Lrp/AsnC ligand binding domain H9K48_RS21960 PF13404 AsnC-type helix-turn-helix domain H9K48_RS21965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS21965 PF03466 LysR substrate binding domain H9K48_RS21985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9K48_RS21985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9K48_RS21990 PF00072 Response regulator receiver domain H9K48_RS21990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K48_RS21990 PF01627 Hpt domain H9K48_RS21990 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS21990 PF00672 HAMP domain H9K48_RS21990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS21995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9K48_RS22000 PF01554 MatE H9K48_RS22005 PF04363 Protein of unknown function (DUF496) H9K48_RS22015 PF04337 Protein of unknown function, DUF480 H9K48_RS22020 PF01541 GIY-YIG catalytic domain H9K48_RS22025 PF13407 Periplasmic binding protein domain H9K48_RS22030 PF00072 Response regulator receiver domain H9K48_RS22030 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS22030 PF09308 LuxQ, periplasmic H9K48_RS22030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS22040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS22040 PF00529 HlyD membrane-fusion protein of T1SS H9K48_RS22060 PF01037 Lrp/AsnC ligand binding domain H9K48_RS22085 PF02355 Protein export membrane protein H9K48_RS22085 PF13721 SecD export protein N-terminal TM region H9K48_RS22085 PF07549 SecD/SecF GG Motif H9K48_RS22090 PF02355 Protein export membrane protein H9K48_RS22090 PF07549 SecD/SecF GG Motif H9K48_RS22100 PF01810 LysE type translocator H9K48_RS22105 PF00106 short chain dehydrogenase H9K48_RS22110 PF00108 Thiolase, N-terminal domain H9K48_RS22110 PF02803 Thiolase, C-terminal domain H9K48_RS22120 PF00561 alpha/beta hydrolase fold H9K48_RS22120 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus H9K48_RS22130 PF03264 NapC/NirT cytochrome c family, N-terminal region H9K48_RS22135 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) H9K48_RS22140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K48_RS22140 PF00384 Molybdopterin oxidoreductase H9K48_RS22140 PF01568 Molydopterin dinucleotide binding domain H9K48_RS22150 PF13187 4Fe-4S dicluster domain H9K48_RS22150 PF12838 4Fe-4S dicluster domain H9K48_RS22155 PF00672 HAMP domain H9K48_RS22155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS22155 PF07730 Histidine kinase H9K48_RS22155 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H9K48_RS22160 PF00072 Response regulator receiver domain H9K48_RS22160 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS22175 PF07687 Peptidase dimerisation domain H9K48_RS22175 PF01546 Peptidase family M20/M25/M40 H9K48_RS22180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9K48_RS22185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS22190 PF00873 AcrB/AcrD/AcrF family H9K48_RS22195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS22195 PF12729 Four helix bundle sensory module for signal transduction H9K48_RS22195 PF00672 HAMP domain H9K48_RS22200 PF00472 RF-1 domain H9K48_RS22205 PF13419 Haloacid dehalogenase-like hydrolase H9K48_RS22210 PF01389 OmpA-like transmembrane domain H9K48_RS22210 PF00691 OmpA family H9K48_RS22215 PF00793 DAHP synthetase I family H9K48_RS22220 PF07690 Major Facilitator Superfamily H9K48_RS22225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS22225 PF08447 PAS fold H9K48_RS22230 PF00456 Transketolase, thiamine diphosphate binding domain H9K48_RS22230 PF02780 Transketolase, C-terminal domain H9K48_RS22230 PF02779 Transketolase, pyrimidine binding domain H9K48_RS22235 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9K48_RS22245 PF00704 Glycosyl hydrolases family 18 H9K48_RS22245 PF08329 Chitinase A, N-terminal domain H9K48_RS22250 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS22250 PF00563 EAL domain H9K48_RS22250 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS22255 PF00581 Rhodanese-like domain H9K48_RS22275 PF00899 ThiF family H9K48_RS22280 PF00994 Probable molybdopterin binding domain H9K48_RS22280 PF03454 MoeA C-terminal region (domain IV) H9K48_RS22280 PF03453 MoeA N-terminal region (domain I and II) H9K48_RS22285 PF01227 GTP cyclohydrolase I H9K48_RS22290 PF01566 Natural resistance-associated macrophage protein H9K48_RS22300 PF00654 Voltage gated chloride channel H9K48_RS22315 PF00248 Aldo/keto reductase family H9K48_RS22320 PF00072 Response regulator receiver domain H9K48_RS22330 PF03853 YjeF-related protein N-terminus H9K48_RS22330 PF01256 Carbohydrate kinase H9K48_RS22335 PF00478 IMP dehydrogenase / GMP reductase domain H9K48_RS22340 PF00501 AMP-binding enzyme H9K48_RS22340 PF13193 AMP-binding enzyme C-terminal domain H9K48_RS22345 PF01012 Electron transfer flavoprotein domain H9K48_RS22345 PF00766 Electron transfer flavoprotein FAD-binding domain H9K48_RS22350 PF01012 Electron transfer flavoprotein domain H9K48_RS22360 PF00005 ABC transporter H9K48_RS22360 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9K48_RS22385 PF00005 ABC transporter H9K48_RS22390 PF00501 AMP-binding enzyme H9K48_RS22390 PF14535 AMP-binding enzyme C-terminal domain H9K48_RS22395 PF05724 Thiopurine S-methyltransferase (TPMT) H9K48_RS22405 PF00034 Cytochrome c H9K48_RS22415 PF13411 MerR HTH family regulatory protein H9K48_RS22420 PF02627 Carboxymuconolactone decarboxylase family H9K48_RS22425 PF02567 Phenazine biosynthesis-like protein H9K48_RS22435 PF02322 Cytochrome bd terminal oxidase subunit II H9K48_RS22440 PF01654 Cytochrome bd terminal oxidase subunit I H9K48_RS22445 PF00155 Aminotransferase class I and II H9K48_RS22445 PF00392 Bacterial regulatory proteins, gntR family H9K48_RS22450 PF12464 Maltose acetyltransferase H9K48_RS22450 PF14602 Hexapeptide repeat of succinyl-transferase H9K48_RS22455 PF00924 Mechanosensitive ion channel H9K48_RS22455 PF12795 Mechanosensitive ion channel porin domain H9K48_RS22455 PF12794 Mechanosensitive ion channel inner membrane domain 1 H9K48_RS22470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS22470 PF00672 HAMP domain H9K48_RS22470 PF01627 Hpt domain H9K48_RS22470 PF00072 Response regulator receiver domain H9K48_RS22470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9K48_RS22470 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS22475 PF00682 HMGL-like H9K48_RS22480 PF02785 Biotin carboxylase C-terminal domain H9K48_RS22480 PF00364 Biotin-requiring enzyme H9K48_RS22480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9K48_RS22480 PF18140 Propionyl-coenzyme A carboxylase BT domain H9K48_RS22480 PF00289 Biotin carboxylase, N-terminal domain H9K48_RS22485 PF00378 Enoyl-CoA hydratase/isomerase H9K48_RS22490 PF01039 Carboxyl transferase domain H9K48_RS22495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K48_RS22495 PF02770 Acyl-CoA dehydrogenase, middle domain H9K48_RS22495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K48_RS22500 PF00376 MerR family regulatory protein H9K48_RS22500 PF09278 MerR, DNA binding H9K48_RS22505 PF00108 Thiolase, N-terminal domain H9K48_RS22505 PF02803 Thiolase, C-terminal domain H9K48_RS22510 PF00171 Aldehyde dehydrogenase family H9K48_RS22515 PF02770 Acyl-CoA dehydrogenase, middle domain H9K48_RS22515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9K48_RS22515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9K48_RS22520 PF00378 Enoyl-CoA hydratase/isomerase H9K48_RS22530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9K48_RS22530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9K48_RS22540 PF17151 Periplasmic sensor domain H9K48_RS22540 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS22545 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS22545 PF13977 BetI-type transcriptional repressor, C-terminal H9K48_RS22550 PF00171 Aldehyde dehydrogenase family H9K48_RS22555 PF00732 GMC oxidoreductase H9K48_RS22555 PF05199 GMC oxidoreductase H9K48_RS22560 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9K48_RS22565 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS22570 PF00571 CBS domain H9K48_RS22570 PF00005 ABC transporter H9K48_RS22575 PF00881 Nitroreductase family H9K48_RS22585 PF01145 SPFH domain / Band 7 family H9K48_RS22585 PF16200 C-terminal region of band_7 H9K48_RS22595 PF00563 EAL domain H9K48_RS22595 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS22595 PF03707 Bacterial signalling protein N terminal repeat H9K48_RS22595 PF13188 PAS domain H9K48_RS22600 PF00034 Cytochrome c H9K48_RS22600 PF03150 Di-haem cytochrome c peroxidase H9K48_RS22605 PF09308 LuxQ, periplasmic H9K48_RS22605 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS22605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS22605 PF00072 Response regulator receiver domain H9K48_RS22620 PF04116 Fatty acid hydroxylase superfamily H9K48_RS22660 PF01048 Phosphorylase superfamily H9K48_RS22665 PF00563 EAL domain H9K48_RS22665 PF00990 Diguanylate cyclase, GGDEF domain H9K48_RS22670 PF05025 RbsD / FucU transport protein family H9K48_RS22675 PF00005 ABC transporter H9K48_RS22680 PF02653 Branched-chain amino acid transport system / permease component H9K48_RS22685 PF13407 Periplasmic binding protein domain H9K48_RS22690 PF00294 pfkB family carbohydrate kinase H9K48_RS22695 PF00356 Bacterial regulatory proteins, lacI family H9K48_RS22705 PF04973 Nicotinamide mononucleotide transporter H9K48_RS22710 PF01048 Phosphorylase superfamily H9K48_RS22730 PF00486 Transcriptional regulatory protein, C terminal H9K48_RS22730 PF00072 Response regulator receiver domain H9K48_RS22745 PF00245 Alkaline phosphatase H9K48_RS22755 PF00082 Subtilase family H9K48_RS22755 PF01483 Proprotein convertase P-domain H9K48_RS22770 PF03222 Tryptophan/tyrosine permease family H9K48_RS22775 PF00583 Acetyltransferase (GNAT) family H9K48_RS22780 PF01568 Molydopterin dinucleotide binding domain H9K48_RS22780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9K48_RS22780 PF00384 Molybdopterin oxidoreductase H9K48_RS22785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K48_RS22785 PF10414 Sirohaem synthase dimerisation region H9K48_RS22785 PF14824 Sirohaem biosynthesis protein central H9K48_RS22790 PF00591 Glycosyl transferase family, a/b domain H9K48_RS22790 PF02885 Glycosyl transferase family, helical bundle domain H9K48_RS22795 PF01738 Dienelactone hydrolase family H9K48_RS22800 PF08376 Nitrate and nitrite sensing H9K48_RS22800 PF03861 ANTAR domain H9K48_RS22805 PF00005 ABC transporter H9K48_RS22810 PF00528 Binding-protein-dependent transport system inner membrane component H9K48_RS22815 PF00005 ABC transporter H9K48_RS22820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9K48_RS22820 PF04324 BFD-like [2Fe-2S] binding domain H9K48_RS22820 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS22820 PF13806 Rieske-like [2Fe-2S] domain H9K48_RS22820 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9K48_RS22820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9K48_RS22835 PF00440 Bacterial regulatory proteins, tetR family H9K48_RS22835 PF08361 MAATS-type transcriptional repressor, C-terminal region H9K48_RS22850 PF00211 Adenylate and Guanylate cyclase catalytic domain H9K48_RS22850 PF00072 Response regulator receiver domain H9K48_RS22875 PF00069 Protein kinase domain H9K48_RS22875 PF03793 PASTA domain H9K48_RS22890 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H9K48_RS22895 PF00691 OmpA family H9K48_RS22895 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9K48_RS22900 PF06744 Type VI secretion protein IcmF C-terminal H9K48_RS22900 PF14331 ImcF-related N-terminal domain H9K48_RS22900 PF06761 Intracellular multiplication and human macrophage-killing H9K48_RS22920 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H9K48_RS22925 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9K48_RS22930 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9K48_RS22945 PF05947 Type VI secretion system, TssF H9K48_RS22955 PF10431 C-terminal, D2-small domain, of ClpB protein H9K48_RS22955 PF17871 AAA lid domain H9K48_RS22955 PF00004 ATPase family associated with various cellular activities (AAA) H9K48_RS22955 PF07724 AAA domain (Cdc48 subfamily) H9K48_RS22965 PF04717 Type VI secretion system, phage-baseplate injector H9K48_RS22965 PF06715 Gp5 C-terminal repeat (3 copies) H9K48_RS22980 PF12320 Type 5 capsule protein repressor C-terminal domain H9K48_RS22980 PF00149 Calcineurin-like phosphoesterase H9K48_RS22985 PF13476 AAA domain H9K48_RS23005 PF08212 Lipocalin-like domain H9K48_RS23015 PF07690 Major Facilitator Superfamily H9K48_RS23025 PF03606 C4-dicarboxylate anaerobic carrier H9K48_RS23030 PF00034 Cytochrome c H9K48_RS23035 PF01212 Beta-eliminating lyase H9K48_RS23045 PF07728 AAA domain (dynein-related subfamily) H9K48_RS23045 PF17868 AAA lid domain H9K48_RS23045 PF12592 Protein of unknown function (DUF3763) H9K48_RS23050 PF05762 VWA domain containing CoxE-like protein H9K48_RS23065 PF03466 LysR substrate binding domain H9K48_RS23065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS23070 PF01565 FAD binding domain H9K48_RS23070 PF09330 D-lactate dehydrogenase, membrane binding H9K48_RS23085 PF00842 Alanine racemase, C-terminal domain H9K48_RS23085 PF01168 Alanine racemase, N-terminal domain H9K48_RS23090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9K48_RS23090 PF00672 HAMP domain H9K48_RS23105 PF00128 Alpha amylase, catalytic domain H9K48_RS23105 PF09154 Domain of unknown function (DUF1939) H9K48_RS23125 PF06965 Na+/H+ antiporter 1 H9K48_RS23125 PF13462 Thioredoxin H9K48_RS23160 PF01272 Transcription elongation factor, GreA/GreB, C-term H9K48_RS23160 PF14760 Rnk N-terminus H9K48_RS23165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9K48_RS23165 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS23165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9K48_RS23165 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9K48_RS23165 PF04324 BFD-like [2Fe-2S] binding domain H9K48_RS23170 PF13806 Rieske-like [2Fe-2S] domain H9K48_RS23175 PF01226 Formate/nitrite transporter H9K48_RS23180 PF10414 Sirohaem synthase dimerisation region H9K48_RS23180 PF14824 Sirohaem biosynthesis protein central H9K48_RS23180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9K48_RS23195 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9K48_RS23205 PF07715 TonB-dependent Receptor Plug Domain H9K48_RS23205 PF00593 TonB dependent receptor H9K48_RS23220 PF11756 Nitrous oxide-stimulated promoter H9K48_RS23225 PF01554 MatE H9K48_RS23230 PF07494 Two component regulator propeller H9K48_RS23230 PF12833 Helix-turn-helix domain H9K48_RS23230 PF07495 Y_Y_Y domain H9K48_RS23230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS23230 PF00072 Response regulator receiver domain H9K48_RS23230 PF00512 His Kinase A (phospho-acceptor) domain H9K48_RS23235 PF07690 Major Facilitator Superfamily H9K48_RS23240 PF00085 Thioredoxin H9K48_RS23245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9K48_RS23245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9K48_RS23265 PF01238 Phosphomannose isomerase type I H9K48_RS23270 PF07690 Major Facilitator Superfamily H9K48_RS23275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9K48_RS23275 PF07730 Histidine kinase H9K48_RS23275 PF05231 MASE1 H9K48_RS23280 PF00196 Bacterial regulatory proteins, luxR family H9K48_RS23280 PF00072 Response regulator receiver domain H9K48_RS23285 PF07690 Major Facilitator Superfamily H9K48_RS23290 PF02634 FdhD/NarQ family H9K48_RS23295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9K48_RS23295 PF03466 LysR substrate binding domain H9K48_RS23300 PF00384 Molybdopterin oxidoreductase H9K48_RS23305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9K48_RS23305 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9K48_RS23320 PF04143 Sulphur transport H9K48_RS23330 PF00873 AcrB/AcrD/AcrF family H9K48_RS23335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9K48_RS23345 PF03477 ATP cone domain H9K48_RS23345 PF13597 Anaerobic ribonucleoside-triphosphate reductase