locus-tag class description FDP11_RS00010 PF12849 PBP superfamily domain FDP11_RS00015 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS00020 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS00025 PF00005 ABC transporter FDP11_RS00040 PF13519 von Willebrand factor type A domain FDP11_RS00045 PF13519 von Willebrand factor type A domain FDP11_RS00055 PF01882 Protein of unknown function DUF58 FDP11_RS00060 PF17863 AAA lid domain FDP11_RS00060 PF07726 ATPase family associated with various cellular activities (AAA) FDP11_RS00065 PF02743 Cache domain FDP11_RS00065 PF00672 HAMP domain FDP11_RS00065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS00075 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS00080 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS00090 PF00005 ABC transporter FDP11_RS00090 PF00664 ABC transporter transmembrane region FDP11_RS00095 PF00529 HlyD membrane-fusion protein of T1SS FDP11_RS00105 PF01032 FecCD transport family FDP11_RS00110 PF01497 Periplasmic binding protein FDP11_RS00115 PF00005 ABC transporter FDP11_RS00120 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS00120 PF00593 TonB dependent receptor FDP11_RS00125 PF00005 ABC transporter FDP11_RS00125 PF00664 ABC transporter transmembrane region FDP11_RS00130 PF13493 Domain of unknown function (DUF4118) FDP11_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS00130 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS00130 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS00130 PF02702 Osmosensitive K+ channel His kinase sensor domain FDP11_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS00130 PF13493 Domain of unknown function (DUF4118) FDP11_RS00130 PF02702 Osmosensitive K+ channel His kinase sensor domain FDP11_RS00135 PF00072 Response regulator receiver domain FDP11_RS00135 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS00140 PF02254 TrkA-N domain FDP11_RS00140 PF02080 TrkA-C domain FDP11_RS00145 PF02386 Cation transport protein FDP11_RS00150 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS00150 PF00563 EAL domain FDP11_RS00150 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS00155 PF00127 Copper binding proteins, plastocyanin/azurin family FDP11_RS00160 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS00170 PF01238 Phosphomannose isomerase type I FDP11_RS00175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDP11_RS00175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDP11_RS00180 PF12833 Helix-turn-helix domain FDP11_RS00190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDP11_RS00200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDP11_RS00200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDP11_RS00205 PF00199 Catalase FDP11_RS00205 PF06628 Catalase-related immune-responsive FDP11_RS00210 PF13417 Glutathione S-transferase, N-terminal domain FDP11_RS00215 PF00107 Zinc-binding dehydrogenase FDP11_RS00215 PF16884 N-terminal domain of oxidoreductase FDP11_RS00220 PF16925 Tetracyclin repressor-like, C-terminal domain FDP11_RS00220 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS00255 PF13439 Glycosyltransferase Family 4 FDP11_RS00255 PF00534 Glycosyl transferases group 1 FDP11_RS00265 PF02706 Chain length determinant protein FDP11_RS00265 PF13807 G-rich domain on putative tyrosine kinase FDP11_RS00265 PF13614 AAA domain FDP11_RS00280 PF02397 Bacterial sugar transferase FDP11_RS00285 PF00005 ABC transporter FDP11_RS00285 PF08402 TOBE domain FDP11_RS00290 PF01547 Bacterial extracellular solute-binding protein FDP11_RS00295 PF14785 Maltose transport system permease protein MalF P2 domain FDP11_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS00330 PF05661 Protein of unknown function (DUF808) FDP11_RS00335 PF01979 Amidohydrolase family FDP11_RS00340 PF01679 Proteolipid membrane potential modulator FDP11_RS00345 PF03473 MOSC domain FDP11_RS00345 PF03476 MOSC N-terminal beta barrel domain FDP11_RS00345 PF00111 2Fe-2S iron-sulfur cluster binding domain FDP11_RS00345 PF03476 MOSC N-terminal beta barrel domain FDP11_RS00345 PF00111 2Fe-2S iron-sulfur cluster binding domain FDP11_RS00345 PF03473 MOSC domain FDP11_RS00350 PF02540 NAD synthase FDP11_RS00355 PF01467 Cytidylyltransferase-like FDP11_RS00395 PF00005 ABC transporter FDP11_RS00400 PF01032 FecCD transport family FDP11_RS00410 PF02472 Biopolymer transport protein ExbD/TolR FDP11_RS00415 PF01618 MotA/TolQ/ExbB proton channel family FDP11_RS00420 PF03544 Gram-negative bacterial TonB protein C-terminal FDP11_RS00425 PF04055 Radical SAM superfamily FDP11_RS00430 PF06228 Haem utilisation ChuX/HutX FDP11_RS00435 PF01243 Pyridoxamine 5'-phosphate oxidase FDP11_RS00445 PF01584 CheW-like domain FDP11_RS00445 PF00072 Response regulator receiver domain FDP11_RS00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS00460 PF03466 LysR substrate binding domain FDP11_RS00465 PF07690 Major Facilitator Superfamily FDP11_RS00475 PF00682 HMGL-like FDP11_RS00475 PF08502 LeuA allosteric (dimerisation) domain FDP11_RS00495 PF00082 Subtilase family FDP11_RS00515 PF00141 Peroxidase FDP11_RS00520 PF00210 Ferritin-like domain FDP11_RS00525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS00525 PF03466 LysR substrate binding domain FDP11_RS00545 PF08453 Peptidase family M9 N-terminal FDP11_RS00545 PF04151 Bacterial pre-peptidase C-terminal domain FDP11_RS00545 PF01752 Collagenase FDP11_RS00555 PF00128 Alpha amylase, catalytic domain FDP11_RS00570 PF02254 TrkA-N domain FDP11_RS00570 PF00999 Sodium/hydrogen exchanger family FDP11_RS00575 PF02525 Flavodoxin-like fold FDP11_RS00580 PF00582 Universal stress protein family FDP11_RS00585 PF12848 ABC transporter FDP11_RS00585 PF00005 ABC transporter FDP11_RS00585 PF16326 ABC transporter C-terminal domain FDP11_RS00600 PF13533 Biotin-lipoyl like FDP11_RS00605 PF00873 AcrB/AcrD/AcrF family FDP11_RS00610 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDP11_RS00620 PF13302 Acetyltransferase (GNAT) domain FDP11_RS00630 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS00630 PF13185 GAF domain FDP11_RS00640 PF00175 Oxidoreductase NAD-binding domain FDP11_RS00640 PF00111 2Fe-2S iron-sulfur cluster binding domain FDP11_RS00640 PF00970 Oxidoreductase FAD-binding domain FDP11_RS00650 PF00873 AcrB/AcrD/AcrF family FDP11_RS00670 PF00384 Molybdopterin oxidoreductase FDP11_RS00670 PF12838 4Fe-4S dicluster domain FDP11_RS00670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDP11_RS00670 PF01568 Molydopterin dinucleotide binding domain FDP11_RS00670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FDP11_RS00690 PF00005 ABC transporter FDP11_RS00700 PF00672 HAMP domain FDP11_RS00700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS00705 PF10282 Lactonase, 7-bladed beta-propeller FDP11_RS00710 PF02567 Phenazine biosynthesis-like protein FDP11_RS00715 PF01161 Phosphatidylethanolamine-binding protein FDP11_RS00725 PF01758 Sodium Bile acid symporter family FDP11_RS00740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDP11_RS00745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDP11_RS00745 PF02378 Phosphotransferase system, EIIC FDP11_RS00750 PF00107 Zinc-binding dehydrogenase FDP11_RS00750 PF08240 Alcohol dehydrogenase GroES-like domain FDP11_RS00785 PF03222 Tryptophan/tyrosine permease family FDP11_RS00795 PF00672 HAMP domain FDP11_RS00795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS00795 PF02743 Cache domain FDP11_RS00820 PF01551 Peptidase family M23 FDP11_RS00820 PF01476 LysM domain FDP11_RS00820 PF08525 Opacity-associated protein A N-terminal motif FDP11_RS00825 PF08447 PAS fold FDP11_RS00825 PF08448 PAS fold FDP11_RS00825 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS00825 PF00563 EAL domain FDP11_RS00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS00830 PF03466 LysR substrate binding domain FDP11_RS00835 PF07690 Major Facilitator Superfamily FDP11_RS00845 PF00462 Glutaredoxin FDP11_RS00850 PF00892 EamA-like transporter family FDP11_RS00865 PF01557 Fumarylacetoacetate (FAA) hydrolase family FDP11_RS00880 PF12833 Helix-turn-helix domain FDP11_RS00885 PF01810 LysE type translocator FDP11_RS00895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDP11_RS00895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDP11_RS00895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDP11_RS00895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDP11_RS00900 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FDP11_RS00900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDP11_RS00905 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDP11_RS00910 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FDP11_RS00915 PF00510 Cytochrome c oxidase subunit III FDP11_RS00935 PF02628 Cytochrome oxidase assembly protein FDP11_RS00940 PF01040 UbiA prenyltransferase family FDP11_RS00945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDP11_RS00945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDP11_RS00975 PF00313 'Cold-shock' DNA-binding domain FDP11_RS00980 PF03889 Alternative ribosome-rescue factor A FDP11_RS00985 PF13426 PAS domain FDP11_RS00985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS00985 PF08447 PAS fold FDP11_RS00990 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS01005 PF02687 FtsX-like permease family FDP11_RS01005 PF12704 MacB-like periplasmic core domain FDP11_RS01005 PF00005 ABC transporter FDP11_RS01010 PF00005 ABC transporter FDP11_RS01010 PF02687 FtsX-like permease family FDP11_RS01010 PF12704 MacB-like periplasmic core domain FDP11_RS01020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS01020 PF00672 HAMP domain FDP11_RS01020 PF17200 Single Cache domain 2 FDP11_RS01025 PF00210 Ferritin-like domain FDP11_RS01035 PF07995 Glucose / Sorbosone dehydrogenase FDP11_RS01040 PF00465 Iron-containing alcohol dehydrogenase FDP11_RS01055 PF00892 EamA-like transporter family FDP11_RS01080 PF03466 LysR substrate binding domain FDP11_RS01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS01090 PF13193 AMP-binding enzyme C-terminal domain FDP11_RS01090 PF00501 AMP-binding enzyme FDP11_RS01095 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FDP11_RS01100 PF01329 Pterin 4 alpha carbinolamine dehydratase FDP11_RS01120 PF12843 Putative quorum-sensing-regulated virulence factor FDP11_RS01125 PF00270 DEAD/DEAH box helicase FDP11_RS01125 PF00271 Helicase conserved C-terminal domain FDP11_RS01130 PF09905 DNA-binding protein VF530 FDP11_RS01135 PF00291 Pyridoxal-phosphate dependent enzyme FDP11_RS01145 PF01470 Pyroglutamyl peptidase FDP11_RS01155 PF02492 CobW/HypB/UreG, nucleotide-binding domain FDP11_RS01155 PF07683 Cobalamin synthesis protein cobW C-terminal domain FDP11_RS01160 PF00270 DEAD/DEAH box helicase FDP11_RS01160 PF00271 Helicase conserved C-terminal domain FDP11_RS01180 PF12792 CSS motif domain associated with EAL FDP11_RS01180 PF00563 EAL domain FDP11_RS01185 PF00005 ABC transporter FDP11_RS01190 PF00672 HAMP domain FDP11_RS01190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS01190 PF12729 Four helix bundle sensory module for signal transduction FDP11_RS01200 PF03466 LysR substrate binding domain FDP11_RS01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS01205 PF00884 Sulfatase FDP11_RS01210 PF04055 Radical SAM superfamily FDP11_RS01210 PF13186 Iron-sulfur cluster-binding domain FDP11_RS01215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS01215 PF03466 LysR substrate binding domain FDP11_RS01225 PF01575 MaoC like domain FDP11_RS01230 PF12849 PBP superfamily domain FDP11_RS01240 PF12833 Helix-turn-helix domain FDP11_RS01245 PF00575 S1 RNA binding domain FDP11_RS01245 PF00773 RNB domain FDP11_RS01245 PF08206 Ribonuclease B OB domain FDP11_RS01250 PF00270 DEAD/DEAH box helicase FDP11_RS01250 PF03880 DbpA RNA binding domain FDP11_RS01250 PF00271 Helicase conserved C-terminal domain FDP11_RS01255 PF13426 PAS domain FDP11_RS01255 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS01255 PF00563 EAL domain FDP11_RS01260 PF00871 Acetokinase family FDP11_RS01265 PF13426 PAS domain FDP11_RS01265 PF08447 PAS fold FDP11_RS01265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS01275 PF10063 Uncharacterized integral membrane protein (DUF2301) FDP11_RS01280 PF00682 HMGL-like FDP11_RS01285 PF00378 Enoyl-CoA hydratase/isomerase FDP11_RS01290 PF01039 Carboxyl transferase domain FDP11_RS01295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDP11_RS01295 PF02770 Acyl-CoA dehydrogenase, middle domain FDP11_RS01295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDP11_RS01300 PF09278 MerR, DNA binding FDP11_RS01300 PF00376 MerR family regulatory protein FDP11_RS01305 PF02803 Thiolase, C-terminal domain FDP11_RS01305 PF00108 Thiolase, N-terminal domain FDP11_RS01310 PF00171 Aldehyde dehydrogenase family FDP11_RS01315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDP11_RS01315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDP11_RS01315 PF02770 Acyl-CoA dehydrogenase, middle domain FDP11_RS01320 PF00378 Enoyl-CoA hydratase/isomerase FDP11_RS01325 PF00378 Enoyl-CoA hydratase/isomerase FDP11_RS01330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDP11_RS01330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDP11_RS01340 PF06481 COX Aromatic Rich Motif FDP11_RS01340 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FDP11_RS01345 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDP11_RS01350 PF00510 Cytochrome c oxidase subunit III FDP11_RS01360 PF01040 UbiA prenyltransferase family FDP11_RS01375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDP11_RS01380 PF08031 Berberine and berberine like FDP11_RS01380 PF01565 FAD binding domain FDP11_RS01385 PF00005 ABC transporter FDP11_RS01390 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS01395 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS01400 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS01410 PF03466 LysR substrate binding domain FDP11_RS01410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS01415 PF02798 Glutathione S-transferase, N-terminal domain FDP11_RS01415 PF00043 Glutathione S-transferase, C-terminal domain FDP11_RS01425 PF00364 Biotin-requiring enzyme FDP11_RS01425 PF02817 e3 binding domain FDP11_RS01425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDP11_RS01430 PF02779 Transketolase, pyrimidine binding domain FDP11_RS01430 PF02780 Transketolase, C-terminal domain FDP11_RS01435 PF00676 Dehydrogenase E1 component FDP11_RS01450 PF00012 Hsp70 protein FDP11_RS01455 PF04314 Copper chaperone PCu(A)C FDP11_RS01480 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS01480 PF00072 Response regulator receiver domain FDP11_RS01495 PF00245 Alkaline phosphatase FDP11_RS01505 PF01483 Proprotein convertase P-domain FDP11_RS01505 PF00082 Subtilase family FDP11_RS01515 PF00072 Response regulator receiver domain FDP11_RS01515 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS01520 PF03222 Tryptophan/tyrosine permease family FDP11_RS01530 PF01568 Molydopterin dinucleotide binding domain FDP11_RS01530 PF00384 Molybdopterin oxidoreductase FDP11_RS01530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDP11_RS01535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDP11_RS01535 PF14824 Sirohaem biosynthesis protein central FDP11_RS01535 PF10414 Sirohaem synthase dimerisation region FDP11_RS01540 PF00591 Glycosyl transferase family, a/b domain FDP11_RS01540 PF02885 Glycosyl transferase family, helical bundle domain FDP11_RS01545 PF01738 Dienelactone hydrolase family FDP11_RS01550 PF08376 Nitrate and nitrite sensing FDP11_RS01550 PF03861 ANTAR domain FDP11_RS01560 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS01565 PF00005 ABC transporter FDP11_RS01570 PF13806 Rieske-like [2Fe-2S] domain FDP11_RS01570 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDP11_RS01570 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS01570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDP11_RS01570 PF04324 BFD-like [2Fe-2S] binding domain FDP11_RS01570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDP11_RS01585 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS01585 PF08361 MAATS-type transcriptional repressor, C-terminal region FDP11_RS01600 PF00211 Adenylate and Guanylate cyclase catalytic domain FDP11_RS01600 PF00072 Response regulator receiver domain FDP11_RS01625 PF00069 Protein kinase domain FDP11_RS01625 PF03793 PASTA domain FDP11_RS01645 PF13677 Membrane MotB of proton-channel complex MotA/MotB FDP11_RS01645 PF00691 OmpA family FDP11_RS01705 PF00004 ATPase family associated with various cellular activities (AAA) FDP11_RS01705 PF07724 AAA domain (Cdc48 subfamily) FDP11_RS01705 PF10431 C-terminal, D2-small domain, of ClpB protein FDP11_RS01705 PF17871 AAA lid domain FDP11_RS01715 PF16671 Actin cross-linking domain FDP11_RS01715 PF04717 Type VI secretion system, phage-baseplate injector FDP11_RS01730 PF00149 Calcineurin-like phosphoesterase FDP11_RS01730 PF12320 Type 5 capsule protein repressor C-terminal domain FDP11_RS01735 PF13476 AAA domain FDP11_RS01755 PF08212 Lipocalin-like domain FDP11_RS01765 PF07690 Major Facilitator Superfamily FDP11_RS01780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS01780 PF00072 Response regulator receiver domain FDP11_RS01785 PF00155 Aminotransferase class I and II FDP11_RS01790 PF01926 50S ribosome-binding GTPase FDP11_RS01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS01795 PF03466 LysR substrate binding domain FDP11_RS01800 PF00884 Sulfatase FDP11_RS01805 PF04055 Radical SAM superfamily FDP11_RS01805 PF13186 Iron-sulfur cluster-binding domain FDP11_RS01840 PF04002 RadC-like JAB domain FDP11_RS01855 PF12431 Transcriptional regulator FDP11_RS01855 PF00072 Response regulator receiver domain FDP11_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS01860 PF17203 Single cache domain 3 FDP11_RS01865 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FDP11_RS01870 PF00682 HMGL-like FDP11_RS01870 PF00364 Biotin-requiring enzyme FDP11_RS01870 PF02436 Conserved carboxylase domain FDP11_RS01875 PF04277 Oxaloacetate decarboxylase, gamma chain FDP11_RS01880 PF03390 2-hydroxycarboxylate transporter family FDP11_RS01885 PF08218 Citrate lyase ligase C-terminal domain FDP11_RS01890 PF06857 Malonate decarboxylase delta subunit (MdcD) FDP11_RS01895 PF03328 HpcH/HpaI aldolase/citrate lyase family FDP11_RS01900 PF04223 Citrate lyase, alpha subunit (CitF) FDP11_RS01905 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FDP11_RS01910 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FDP11_RS01925 PF03466 LysR substrate binding domain FDP11_RS01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS01940 PF03466 LysR substrate binding domain FDP11_RS01940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS01945 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS01945 PF00072 Response regulator receiver domain FDP11_RS01975 PF00465 Iron-containing alcohol dehydrogenase FDP11_RS01980 PF00596 Class II Aldolase and Adducin N-terminal domain FDP11_RS01985 PF06134 L-rhamnose isomerase (RhaA) FDP11_RS01990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDP11_RS01995 PF05336 L-rhamnose mutarotase FDP11_RS02005 PF02311 AraC-like ligand binding domain FDP11_RS02005 PF12833 Helix-turn-helix domain FDP11_RS02030 PF13737 Transposase DDE domain FDP11_RS02045 PF02743 Cache domain FDP11_RS02045 PF00672 HAMP domain FDP11_RS02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS02055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS02060 PF00563 EAL domain FDP11_RS02060 PF12792 CSS motif domain associated with EAL FDP11_RS02070 PF18500 CadC C-terminal domain 1 FDP11_RS02070 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS02115 PF17128 Domain of unknown function (DUF5107) FDP11_RS02115 PF13181 Tetratricopeptide repeat FDP11_RS02120 PF00083 Sugar (and other) transporter FDP11_RS02130 PF00480 ROK family FDP11_RS02135 PF02872 5'-nucleotidase, C-terminal domain FDP11_RS02135 PF00149 Calcineurin-like phosphoesterase FDP11_RS02155 PF14338 Mrr N-terminal domain FDP11_RS02155 PF04471 Restriction endonuclease FDP11_RS02160 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FDP11_RS02160 PF00271 Helicase conserved C-terminal domain FDP11_RS02160 PF04851 Type III restriction enzyme, res subunit FDP11_RS02160 PF08463 EcoEI R protein C-terminal FDP11_RS02165 PF01420 Type I restriction modification DNA specificity domain FDP11_RS02180 PF02384 N-6 DNA Methylase FDP11_RS02180 PF12161 HsdM N-terminal domain FDP11_RS02200 PF03466 LysR substrate binding domain FDP11_RS02200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS02210 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS02210 PF09456 RcsC Alpha-Beta-Loop (ABL) FDP11_RS02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS02210 PF00072 Response regulator receiver domain FDP11_RS02215 PF13188 PAS domain FDP11_RS02215 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS02215 PF00563 EAL domain FDP11_RS02215 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS02220 PF00072 Response regulator receiver domain FDP11_RS02220 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS02225 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS02235 PF00072 Response regulator receiver domain FDP11_RS02235 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS02255 PF00072 Response regulator receiver domain FDP11_RS02255 PF01584 CheW-like domain FDP11_RS02270 PF00892 EamA-like transporter family FDP11_RS02280 PF01569 PAP2 superfamily FDP11_RS02290 PF03606 C4-dicarboxylate anaerobic carrier FDP11_RS02295 PF00034 Cytochrome c FDP11_RS02300 PF01212 Beta-eliminating lyase FDP11_RS02310 PF07728 AAA domain (dynein-related subfamily) FDP11_RS02310 PF12592 Protein of unknown function (DUF3763) FDP11_RS02310 PF17868 AAA lid domain FDP11_RS02315 PF05762 VWA domain containing CoxE-like protein FDP11_RS02330 PF03466 LysR substrate binding domain FDP11_RS02330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS02335 PF01565 FAD binding domain FDP11_RS02335 PF09330 D-lactate dehydrogenase, membrane binding FDP11_RS02350 PF01168 Alanine racemase, N-terminal domain FDP11_RS02350 PF00842 Alanine racemase, C-terminal domain FDP11_RS02355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS02355 PF00672 HAMP domain FDP11_RS02370 PF09154 Domain of unknown function (DUF1939) FDP11_RS02370 PF00128 Alpha amylase, catalytic domain FDP11_RS02390 PF13462 Thioredoxin FDP11_RS02390 PF06965 Na+/H+ antiporter 1 FDP11_RS02425 PF01272 Transcription elongation factor, GreA/GreB, C-term FDP11_RS02425 PF14760 Rnk N-terminus FDP11_RS02430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDP11_RS02430 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS02430 PF18267 Rubredoxin NAD+ reductase C-terminal domain FDP11_RS02430 PF04324 BFD-like [2Fe-2S] binding domain FDP11_RS02430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDP11_RS02435 PF13806 Rieske-like [2Fe-2S] domain FDP11_RS02440 PF01226 Formate/nitrite transporter FDP11_RS02445 PF14824 Sirohaem biosynthesis protein central FDP11_RS02445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDP11_RS02445 PF10414 Sirohaem synthase dimerisation region FDP11_RS02460 PF03605 Anaerobic c4-dicarboxylate membrane transporter FDP11_RS02470 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS02470 PF00593 TonB dependent receptor FDP11_RS02485 PF11756 Nitrous oxide-stimulated promoter FDP11_RS02500 PF07690 Major Facilitator Superfamily FDP11_RS02505 PF00085 Thioredoxin FDP11_RS02510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDP11_RS02510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDP11_RS02530 PF01238 Phosphomannose isomerase type I FDP11_RS02535 PF07690 Major Facilitator Superfamily FDP11_RS02540 PF07730 Histidine kinase FDP11_RS02540 PF05231 MASE1 FDP11_RS02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS02545 PF00072 Response regulator receiver domain FDP11_RS02545 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS02550 PF07690 Major Facilitator Superfamily FDP11_RS02555 PF02634 FdhD/NarQ family FDP11_RS02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS02560 PF03466 LysR substrate binding domain FDP11_RS02565 PF00384 Molybdopterin oxidoreductase FDP11_RS02570 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS02570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDP11_RS02585 PF04143 Sulphur transport FDP11_RS02595 PF00873 AcrB/AcrD/AcrF family FDP11_RS02600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS02610 PF03477 ATP cone domain FDP11_RS02610 PF13597 Anaerobic ribonucleoside-triphosphate reductase FDP11_RS02650 PF17862 AAA+ lid domain FDP11_RS02650 PF01434 Peptidase family M41 FDP11_RS02650 PF00004 ATPase family associated with various cellular activities (AAA) FDP11_RS02730 PF01554 MatE FDP11_RS02735 PF12833 Helix-turn-helix domain FDP11_RS02740 PF00155 Aminotransferase class I and II FDP11_RS02745 PF08443 RimK-like ATP-grasp domain FDP11_RS02745 PF18030 RimK PreATP-grasp domain FDP11_RS02755 PF04076 Bacterial OB fold (BOF) protein FDP11_RS02760 PF07685 CobB/CobQ-like glutamine amidotransferase domain FDP11_RS02770 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS02775 PF00005 ABC transporter FDP11_RS02775 PF03459 TOBE domain FDP11_RS02785 PF00360 Phytochrome region FDP11_RS02785 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS02785 PF00563 EAL domain FDP11_RS02785 PF01590 GAF domain FDP11_RS02795 PF00072 Response regulator receiver domain FDP11_RS02795 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS02810 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDP11_RS02810 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FDP11_RS02810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDP11_RS02815 PF02233 NAD(P) transhydrogenase beta subunit FDP11_RS02825 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS02825 PF00072 Response regulator receiver domain FDP11_RS02840 PF03701 Uncharacterised protein family (UPF0181) FDP11_RS02845 PF00582 Universal stress protein family FDP11_RS02855 PF03466 LysR substrate binding domain FDP11_RS02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS02870 PF01253 Translation initiation factor SUI1 FDP11_RS02880 PF01820 D-ala D-ala ligase N-terminus FDP11_RS02880 PF07478 D-ala D-ala ligase C-terminus FDP11_RS02890 PF00583 Acetyltransferase (GNAT) family FDP11_RS02890 PF13380 CoA binding domain FDP11_RS02890 PF13607 Succinyl-CoA ligase like flavodoxin domain FDP11_RS02895 PF03466 LysR substrate binding domain FDP11_RS02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS02900 PF04886 PT repeat FDP11_RS02900 PF00593 TonB dependent receptor FDP11_RS02900 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS02905 PF16363 GDP-mannose 4,6 dehydratase FDP11_RS02910 PF05231 MASE1 FDP11_RS02910 PF00563 EAL domain FDP11_RS02910 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS02910 PF08448 PAS fold FDP11_RS02910 PF13426 PAS domain FDP11_RS02910 PF08447 PAS fold FDP11_RS02915 PF03746 LamB/YcsF family FDP11_RS02920 PF02682 Carboxyltransferase domain, subdomain C and D FDP11_RS02925 PF02626 Carboxyltransferase domain, subdomain A and B FDP11_RS02940 PF00005 ABC transporter FDP11_RS02945 PF13472 GDSL-like Lipase/Acylhydrolase family FDP11_RS02950 PF07055 Enoyl reductase FAD binding domain FDP11_RS02950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FDP11_RS02950 PF12241 Trans-2-enoyl-CoA reductase catalytic region FDP11_RS02955 PF00563 EAL domain FDP11_RS02955 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS02955 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS02955 PF13188 PAS domain FDP11_RS02965 PF01556 DnaJ C terminal domain FDP11_RS02965 PF00684 DnaJ central domain FDP11_RS02965 PF00226 DnaJ domain FDP11_RS02990 PF12793 Sugar transport-related sRNA regulator N-term FDP11_RS02990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS03000 PF03061 Thioesterase superfamily FDP11_RS03015 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDP11_RS03020 PF12262 Bacterial virulence factor lipase N-terminal FDP11_RS03035 PF03741 Integral membrane protein TerC family FDP11_RS03040 PF02872 5'-nucleotidase, C-terminal domain FDP11_RS03040 PF00149 Calcineurin-like phosphoesterase FDP11_RS03045 PF11398 Protein of unknown function (DUF2813) FDP11_RS03050 PF06496 Protein of unknown function (DUF1097) FDP11_RS03055 PF03466 LysR substrate binding domain FDP11_RS03055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS03060 PF01226 Formate/nitrite transporter FDP11_RS03065 PF04264 YceI-like domain FDP11_RS03070 PF01292 Prokaryotic cytochrome b561 FDP11_RS03085 PF00563 EAL domain FDP11_RS03085 PF12792 CSS motif domain associated with EAL FDP11_RS03090 PF00270 DEAD/DEAH box helicase FDP11_RS03090 PF00271 Helicase conserved C-terminal domain FDP11_RS03095 PF04336 Acyl carrier protein phosphodiesterase FDP11_RS03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS03105 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS03110 PF11849 Domain of unknown function (DUF3369) FDP11_RS03125 PF00294 pfkB family carbohydrate kinase FDP11_RS03130 PF01268 Formate--tetrahydrofolate ligase FDP11_RS03135 PF00483 Nucleotidyl transferase FDP11_RS03140 PF06483 Chitinase C FDP11_RS03140 PF00704 Glycosyl hydrolases family 18 FDP11_RS03145 PF12833 Helix-turn-helix domain FDP11_RS03145 PF06719 AraC-type transcriptional regulator N-terminus FDP11_RS03150 PF00465 Iron-containing alcohol dehydrogenase FDP11_RS03160 PF14532 Sigma-54 interaction domain FDP11_RS03160 PF02954 Bacterial regulatory protein, Fis family FDP11_RS03160 PF00072 Response regulator receiver domain FDP11_RS03165 PF00672 HAMP domain FDP11_RS03165 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS03175 PF07690 Major Facilitator Superfamily FDP11_RS03180 PF02887 Pyruvate kinase, alpha/beta domain FDP11_RS03180 PF00224 Pyruvate kinase, barrel domain FDP11_RS03185 PF00005 ABC transporter FDP11_RS03190 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS03195 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS03200 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS03205 PF00563 EAL domain FDP11_RS03205 PF01590 GAF domain FDP11_RS03205 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS03205 PF00989 PAS fold FDP11_RS03220 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS03220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDP11_RS03225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDP11_RS03225 PF00381 PTS HPr component phosphorylation site FDP11_RS03230 PF00294 pfkB family carbohydrate kinase FDP11_RS03235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDP11_RS03235 PF02378 Phosphotransferase system, EIIC FDP11_RS03245 PF00873 AcrB/AcrD/AcrF family FDP11_RS03265 PF01571 Aminomethyltransferase folate-binding domain FDP11_RS03265 PF08669 Glycine cleavage T-protein C-terminal barrel domain FDP11_RS03275 PF00464 Serine hydroxymethyltransferase FDP11_RS03280 PF01597 Glycine cleavage H-protein FDP11_RS03285 PF02347 Glycine cleavage system P-protein FDP11_RS03325 PF01039 Carboxyl transferase domain FDP11_RS03325 PF17848 Acetyl-coA carboxylase zinc finger domain FDP11_RS03330 PF03466 LysR substrate binding domain FDP11_RS03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS03335 PF11490 DNA polymerase III polC-type N-terminus II FDP11_RS03335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDP11_RS03335 PF14579 Helix-hairpin-helix motif FDP11_RS03335 PF02811 PHP domain FDP11_RS03335 PF00929 Exonuclease FDP11_RS03335 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDP11_RS03345 PF00664 ABC transporter transmembrane region FDP11_RS03345 PF00005 ABC transporter FDP11_RS03365 PF02253 Phospholipase A1 FDP11_RS03375 PF00376 MerR family regulatory protein FDP11_RS03375 PF09278 MerR, DNA binding FDP11_RS03380 PF01327 Polypeptide deformylase FDP11_RS03420 PF01769 Divalent cation transporter FDP11_RS03420 PF00571 CBS domain FDP11_RS03420 PF03448 MgtE intracellular N domain FDP11_RS03440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS03445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDP11_RS03455 PF01757 Acyltransferase family FDP11_RS03465 PF09722 Protein of unknown function (DUF2384) FDP11_RS03470 PF00141 Peroxidase FDP11_RS03475 PF13187 4Fe-4S dicluster domain FDP11_RS03475 PF01645 Conserved region in glutamate synthase FDP11_RS03485 PF12431 Transcriptional regulator FDP11_RS03485 PF00072 Response regulator receiver domain FDP11_RS03490 PF17203 Single cache domain 3 FDP11_RS03490 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FDP11_RS03490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS03490 PF00989 PAS fold FDP11_RS03495 PF00939 Sodium:sulfate symporter transmembrane region FDP11_RS03500 PF00171 Aldehyde dehydrogenase family FDP11_RS03520 PF00892 EamA-like transporter family FDP11_RS03525 PF00893 Small Multidrug Resistance protein FDP11_RS03530 PF01447 Thermolysin metallopeptidase, catalytic domain FDP11_RS03530 PF02868 Thermolysin metallopeptidase, alpha-helical domain FDP11_RS03530 PF03413 Peptidase propeptide and YPEB domain FDP11_RS03530 PF07504 Fungalysin/Thermolysin Propeptide Motif FDP11_RS03530 PF04151 Bacterial pre-peptidase C-terminal domain FDP11_RS03545 PF00814 Glycoprotease family FDP11_RS03545 PF00583 Acetyltransferase (GNAT) family FDP11_RS03555 PF03606 C4-dicarboxylate anaerobic carrier FDP11_RS03560 PF04011 LemA family FDP11_RS03565 PF01435 Peptidase family M48 FDP11_RS03580 PF08774 VRR-NUC domain FDP11_RS03580 PF18081 Fanconi anemia-associated nuclease SAP domain FDP11_RS03590 PF13186 Iron-sulfur cluster-binding domain FDP11_RS03590 PF04055 Radical SAM superfamily FDP11_RS03605 PF04076 Bacterial OB fold (BOF) protein FDP11_RS03610 PF00781 Diacylglycerol kinase catalytic domain FDP11_RS03615 PF03466 LysR substrate binding domain FDP11_RS03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS03620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDP11_RS03635 PF00092 von Willebrand factor type A domain FDP11_RS03650 PF17863 AAA lid domain FDP11_RS03650 PF07726 ATPase family associated with various cellular activities (AAA) FDP11_RS03655 PF04055 Radical SAM superfamily FDP11_RS03655 PF13186 Iron-sulfur cluster-binding domain FDP11_RS03660 PF00884 Sulfatase FDP11_RS03665 PF03466 LysR substrate binding domain FDP11_RS03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS03675 PF00884 Sulfatase FDP11_RS03680 PF00884 Sulfatase FDP11_RS03680 PF16385 Domain of unknown function FDP11_RS03685 PF00072 Response regulator receiver domain FDP11_RS03685 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS03700 PF00072 Response regulator receiver domain FDP11_RS03700 PF01627 Hpt domain FDP11_RS03700 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS03700 PF00672 HAMP domain FDP11_RS03705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDP11_RS03710 PF02142 MGS-like domain FDP11_RS03715 PF00580 UvrD/REP helicase N-terminal domain FDP11_RS03715 PF13361 UvrD-like helicase C-terminal domain FDP11_RS03715 PF12462 DNA helicase IV / RNA helicase N terminal FDP11_RS03720 PF12805 FUSC-like inner membrane protein yccS FDP11_RS03750 PF00593 TonB dependent receptor FDP11_RS03750 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS03760 PF13411 MerR HTH family regulatory protein FDP11_RS03765 PF00005 ABC transporter FDP11_RS03770 PF01032 FecCD transport family FDP11_RS03775 PF01032 FecCD transport family FDP11_RS03780 PF01497 Periplasmic binding protein FDP11_RS03790 PF01048 Phosphorylase superfamily FDP11_RS03795 PF04973 Nicotinamide mononucleotide transporter FDP11_RS03805 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS03810 PF00294 pfkB family carbohydrate kinase FDP11_RS03815 PF13407 Periplasmic binding protein domain FDP11_RS03820 PF02653 Branched-chain amino acid transport system / permease component FDP11_RS03825 PF00005 ABC transporter FDP11_RS03830 PF05025 RbsD / FucU transport protein family FDP11_RS03835 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS03835 PF00563 EAL domain FDP11_RS03840 PF01048 Phosphorylase superfamily FDP11_RS03880 PF04116 Fatty acid hydroxylase superfamily FDP11_RS03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS03895 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS03895 PF00072 Response regulator receiver domain FDP11_RS03895 PF09308 LuxQ, periplasmic FDP11_RS03900 PF00034 Cytochrome c FDP11_RS03900 PF03150 Di-haem cytochrome c peroxidase FDP11_RS03905 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS03905 PF13188 PAS domain FDP11_RS03905 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS03905 PF00563 EAL domain FDP11_RS03915 PF01145 SPFH domain / Band 7 family FDP11_RS03915 PF16200 C-terminal region of band_7 FDP11_RS03925 PF00881 Nitroreductase family FDP11_RS03930 PF00005 ABC transporter FDP11_RS03930 PF00571 CBS domain FDP11_RS03935 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS03940 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDP11_RS03945 PF00732 GMC oxidoreductase FDP11_RS03945 PF05199 GMC oxidoreductase FDP11_RS03950 PF00171 Aldehyde dehydrogenase family FDP11_RS03955 PF13977 BetI-type transcriptional repressor, C-terminal FDP11_RS03955 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS03960 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS03960 PF17151 Periplasmic sensor domain FDP11_RS03970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDP11_RS03970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FDP11_RS03980 PF00378 Enoyl-CoA hydratase/isomerase FDP11_RS03985 PF02770 Acyl-CoA dehydrogenase, middle domain FDP11_RS03985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDP11_RS03985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDP11_RS03990 PF00171 Aldehyde dehydrogenase family FDP11_RS03995 PF02803 Thiolase, C-terminal domain FDP11_RS03995 PF00108 Thiolase, N-terminal domain FDP11_RS04000 PF00376 MerR family regulatory protein FDP11_RS04000 PF09278 MerR, DNA binding FDP11_RS04005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDP11_RS04005 PF02770 Acyl-CoA dehydrogenase, middle domain FDP11_RS04005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDP11_RS04010 PF01039 Carboxyl transferase domain FDP11_RS04015 PF00378 Enoyl-CoA hydratase/isomerase FDP11_RS04020 PF00289 Biotin carboxylase, N-terminal domain FDP11_RS04020 PF02785 Biotin carboxylase C-terminal domain FDP11_RS04020 PF00364 Biotin-requiring enzyme FDP11_RS04020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDP11_RS04025 PF00682 HMGL-like FDP11_RS04030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDP11_RS04030 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS04030 PF00672 HAMP domain FDP11_RS04030 PF01627 Hpt domain FDP11_RS04030 PF00072 Response regulator receiver domain FDP11_RS04045 PF00924 Mechanosensitive ion channel FDP11_RS04045 PF12794 Mechanosensitive ion channel inner membrane domain 1 FDP11_RS04045 PF12795 Mechanosensitive ion channel porin domain FDP11_RS04050 PF14602 Hexapeptide repeat of succinyl-transferase FDP11_RS04050 PF12464 Maltose acetyltransferase FDP11_RS04055 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS04055 PF00155 Aminotransferase class I and II FDP11_RS04060 PF01654 Cytochrome bd terminal oxidase subunit I FDP11_RS04065 PF02322 Cytochrome bd terminal oxidase subunit II FDP11_RS04075 PF02567 Phenazine biosynthesis-like protein FDP11_RS04080 PF02627 Carboxymuconolactone decarboxylase family FDP11_RS04085 PF13411 MerR HTH family regulatory protein FDP11_RS04095 PF00034 Cytochrome c FDP11_RS04105 PF05724 Thiopurine S-methyltransferase (TPMT) FDP11_RS04110 PF00501 AMP-binding enzyme FDP11_RS04110 PF14535 AMP-binding enzyme C-terminal domain FDP11_RS04115 PF00005 ABC transporter FDP11_RS04140 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDP11_RS04140 PF00005 ABC transporter FDP11_RS04150 PF01012 Electron transfer flavoprotein domain FDP11_RS04155 PF00766 Electron transfer flavoprotein FAD-binding domain FDP11_RS04155 PF01012 Electron transfer flavoprotein domain FDP11_RS04160 PF13193 AMP-binding enzyme C-terminal domain FDP11_RS04160 PF00501 AMP-binding enzyme FDP11_RS04165 PF00478 IMP dehydrogenase / GMP reductase domain FDP11_RS04170 PF03853 YjeF-related protein N-terminus FDP11_RS04170 PF01256 Carbohydrate kinase FDP11_RS04180 PF00072 Response regulator receiver domain FDP11_RS04185 PF00248 Aldo/keto reductase family FDP11_RS04200 PF00654 Voltage gated chloride channel FDP11_RS04210 PF01566 Natural resistance-associated macrophage protein FDP11_RS04215 PF01227 GTP cyclohydrolase I FDP11_RS04220 PF03454 MoeA C-terminal region (domain IV) FDP11_RS04220 PF03453 MoeA N-terminal region (domain I and II) FDP11_RS04220 PF00994 Probable molybdopterin binding domain FDP11_RS04225 PF00899 ThiF family FDP11_RS04245 PF00581 Rhodanese-like domain FDP11_RS04250 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS04250 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS04250 PF00563 EAL domain FDP11_RS04255 PF00704 Glycosyl hydrolases family 18 FDP11_RS04255 PF08329 Chitinase A, N-terminal domain FDP11_RS04265 PF00923 Transaldolase/Fructose-6-phosphate aldolase FDP11_RS04270 PF02780 Transketolase, C-terminal domain FDP11_RS04270 PF00456 Transketolase, thiamine diphosphate binding domain FDP11_RS04270 PF02779 Transketolase, pyrimidine binding domain FDP11_RS04275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS04275 PF08447 PAS fold FDP11_RS04280 PF07690 Major Facilitator Superfamily FDP11_RS04285 PF00793 DAHP synthetase I family FDP11_RS04290 PF00691 OmpA family FDP11_RS04290 PF01389 OmpA-like transmembrane domain FDP11_RS04295 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS04300 PF00472 RF-1 domain FDP11_RS04305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS04305 PF00672 HAMP domain FDP11_RS04305 PF12729 Four helix bundle sensory module for signal transduction FDP11_RS04310 PF00873 AcrB/AcrD/AcrF family FDP11_RS04315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS04320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDP11_RS04325 PF01546 Peptidase family M20/M25/M40 FDP11_RS04325 PF07687 Peptidase dimerisation domain FDP11_RS04340 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS04340 PF00072 Response regulator receiver domain FDP11_RS04345 PF00672 HAMP domain FDP11_RS04345 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FDP11_RS04345 PF07730 Histidine kinase FDP11_RS04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS04350 PF12838 4Fe-4S dicluster domain FDP11_RS04350 PF13187 4Fe-4S dicluster domain FDP11_RS04360 PF00384 Molybdopterin oxidoreductase FDP11_RS04360 PF01568 Molydopterin dinucleotide binding domain FDP11_RS04360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDP11_RS04365 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FDP11_RS04370 PF03264 NapC/NirT cytochrome c family, N-terminal region FDP11_RS04380 PF00561 alpha/beta hydrolase fold FDP11_RS04380 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FDP11_RS04390 PF00108 Thiolase, N-terminal domain FDP11_RS04390 PF02803 Thiolase, C-terminal domain FDP11_RS04395 PF00106 short chain dehydrogenase FDP11_RS04410 PF02355 Protein export membrane protein FDP11_RS04410 PF07549 SecD/SecF GG Motif FDP11_RS04415 PF13721 SecD export protein N-terminal TM region FDP11_RS04415 PF07549 SecD/SecF GG Motif FDP11_RS04415 PF02355 Protein export membrane protein FDP11_RS04440 PF01037 Lrp/AsnC ligand binding domain FDP11_RS04460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS04460 PF00529 HlyD membrane-fusion protein of T1SS FDP11_RS04470 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS04470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS04470 PF00072 Response regulator receiver domain FDP11_RS04470 PF09308 LuxQ, periplasmic FDP11_RS04475 PF13407 Periplasmic binding protein domain FDP11_RS04480 PF01541 GIY-YIG catalytic domain FDP11_RS04485 PF04337 Protein of unknown function, DUF480 FDP11_RS04495 PF04363 Protein of unknown function (DUF496) FDP11_RS04500 PF01554 MatE FDP11_RS04505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDP11_RS04510 PF00672 HAMP domain FDP11_RS04510 PF00072 Response regulator receiver domain FDP11_RS04510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS04510 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS04510 PF01627 Hpt domain FDP11_RS04510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDP11_RS04515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDP11_RS04515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDP11_RS04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS04530 PF03466 LysR substrate binding domain FDP11_RS04535 PF13404 AsnC-type helix-turn-helix domain FDP11_RS04535 PF01037 Lrp/AsnC ligand binding domain FDP11_RS04540 PF13520 Amino acid permease FDP11_RS04545 PF00155 Aminotransferase class I and II FDP11_RS04545 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS04555 PF03109 ABC1 family FDP11_RS04560 PF01769 Divalent cation transporter FDP11_RS04560 PF03448 MgtE intracellular N domain FDP11_RS04560 PF00571 CBS domain FDP11_RS04565 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FDP11_RS04570 PF07969 Amidohydrolase family FDP11_RS04580 PF01966 HD domain FDP11_RS04590 PF07690 Major Facilitator Superfamily FDP11_RS04600 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDP11_RS04605 PF00255 Glutathione peroxidase FDP11_RS04620 PF01323 DSBA-like thioredoxin domain FDP11_RS04635 PF00106 short chain dehydrogenase FDP11_RS04640 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS04640 PF00072 Response regulator receiver domain FDP11_RS04645 PF00672 HAMP domain FDP11_RS04645 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS04655 PF01219 Prokaryotic diacylglycerol kinase FDP11_RS04660 PF08019 Phosphoethanolamine transferase EptA/EptB FDP11_RS04660 PF00884 Sulfatase FDP11_RS04665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FDP11_RS04675 PF07690 Major Facilitator Superfamily FDP11_RS04690 PF01047 MarR family FDP11_RS04700 PF01734 Patatin-like phospholipase FDP11_RS04705 PF02678 Pirin FDP11_RS04705 PF05726 Pirin C-terminal cupin domain FDP11_RS04710 PF00313 'Cold-shock' DNA-binding domain FDP11_RS04725 PF00962 Adenosine/AMP deaminase FDP11_RS04730 PF00462 Glutaredoxin FDP11_RS04730 PF08534 Redoxin FDP11_RS04745 PF00768 D-alanyl-D-alanine carboxypeptidase FDP11_RS04745 PF07943 Penicillin-binding protein 5, C-terminal domain FDP11_RS04750 PF02798 Glutathione S-transferase, N-terminal domain FDP11_RS04755 PF02909 Tetracyclin repressor-like, C-terminal domain FDP11_RS04755 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS04760 PF01872 RibD C-terminal domain FDP11_RS04815 PF01497 Periplasmic binding protein FDP11_RS04815 PF12833 Helix-turn-helix domain FDP11_RS04820 PF00155 Aminotransferase class I and II FDP11_RS04845 PF00270 DEAD/DEAH box helicase FDP11_RS04845 PF00271 Helicase conserved C-terminal domain FDP11_RS04855 PF03466 LysR substrate binding domain FDP11_RS04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS04860 PF03466 LysR substrate binding domain FDP11_RS04860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS04870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDP11_RS04875 PF08240 Alcohol dehydrogenase GroES-like domain FDP11_RS04875 PF00107 Zinc-binding dehydrogenase FDP11_RS04890 PF12833 Helix-turn-helix domain FDP11_RS04890 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDP11_RS04895 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FDP11_RS04910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS04910 PF03466 LysR substrate binding domain FDP11_RS04920 PF00710 Asparaginase, N-terminal FDP11_RS04920 PF17763 Glutaminase/Asparaginase C-terminal domain FDP11_RS04925 PF03618 Kinase/pyrophosphorylase FDP11_RS04930 PF00391 PEP-utilising enzyme, mobile domain FDP11_RS04930 PF02896 PEP-utilising enzyme, TIM barrel domain FDP11_RS04930 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FDP11_RS04945 PF00579 tRNA synthetases class I (W and Y) FDP11_RS04950 PF13416 Bacterial extracellular solute-binding protein FDP11_RS04960 PF03466 LysR substrate binding domain FDP11_RS04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS04965 PF13533 Biotin-lipoyl like FDP11_RS04970 PF00873 AcrB/AcrD/AcrF family FDP11_RS04985 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS04985 PF07694 5TMR of 5TMR-LYT FDP11_RS04995 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS05000 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FDP11_RS05000 PF02837 Glycosyl hydrolases family 2, sugar binding domain FDP11_RS05000 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FDP11_RS05000 PF00703 Glycosyl hydrolases family 2 FDP11_RS05005 PF02028 BCCT, betaine/carnitine/choline family transporter FDP11_RS05010 PF07702 UTRA domain FDP11_RS05010 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS05035 PF08402 TOBE domain FDP11_RS05035 PF00005 ABC transporter FDP11_RS05075 PF00873 AcrB/AcrD/AcrF family FDP11_RS05080 PF13533 Biotin-lipoyl like FDP11_RS05085 PF13091 PLD-like domain FDP11_RS05110 PF09278 MerR, DNA binding FDP11_RS05110 PF00376 MerR family regulatory protein FDP11_RS05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS05120 PF03466 LysR substrate binding domain FDP11_RS05130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FDP11_RS05130 PF13378 Enolase C-terminal domain-like FDP11_RS05135 PF00009 Elongation factor Tu GTP binding domain FDP11_RS05135 PF03144 Elongation factor Tu domain 2 FDP11_RS05135 PF03764 Elongation factor G, domain IV FDP11_RS05135 PF14492 Elongation Factor G, domain II FDP11_RS05135 PF00679 Elongation factor G C-terminus FDP11_RS05160 PF02001 Protein of unknown function DUF134 FDP11_RS05165 PF04170 NlpE N-terminal domain FDP11_RS05165 PF17185 NlpE C-terminal OB domain FDP11_RS05170 PF06629 MltA-interacting protein MipA FDP11_RS05180 PF00691 OmpA family FDP11_RS05180 PF01389 OmpA-like transmembrane domain FDP11_RS05185 PF03466 LysR substrate binding domain FDP11_RS05185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS05210 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FDP11_RS05210 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FDP11_RS05220 PF00857 Isochorismatase family FDP11_RS05230 PF06628 Catalase-related immune-responsive FDP11_RS05230 PF00199 Catalase FDP11_RS05240 PF00455 DeoR C terminal sensor domain FDP11_RS05240 PF08220 DeoR-like helix-turn-helix domain FDP11_RS05245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS05250 PF01641 SelR domain FDP11_RS05250 PF01625 Peptide methionine sulfoxide reductase FDP11_RS05260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDP11_RS05260 PF02378 Phosphotransferase system, EIIC FDP11_RS05260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDP11_RS05270 PF17678 Glycosyl hydrolase family 92 N-terminal domain FDP11_RS05270 PF07971 Glycosyl hydrolase family 92 FDP11_RS05275 PF17678 Glycosyl hydrolase family 92 N-terminal domain FDP11_RS05275 PF07971 Glycosyl hydrolase family 92 FDP11_RS05285 PF07971 Glycosyl hydrolase family 92 FDP11_RS05285 PF17678 Glycosyl hydrolase family 92 N-terminal domain FDP11_RS05290 PF17678 Glycosyl hydrolase family 92 N-terminal domain FDP11_RS05290 PF07971 Glycosyl hydrolase family 92 FDP11_RS05295 PF03060 Nitronate monooxygenase FDP11_RS05300 PF02872 5'-nucleotidase, C-terminal domain FDP11_RS05300 PF00149 Calcineurin-like phosphoesterase FDP11_RS05310 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS05310 PF08359 YsiA-like protein, C-terminal region FDP11_RS05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS05325 PF03466 LysR substrate binding domain FDP11_RS05330 PF01810 LysE type translocator FDP11_RS05345 PF00118 TCP-1/cpn60 chaperonin family FDP11_RS05350 PF00166 Chaperonin 10 Kd subunit FDP11_RS05355 PF00581 Rhodanese-like domain FDP11_RS05370 PF01070 FMN-dependent dehydrogenase FDP11_RS05395 PF00460 Flagella basal body rod protein FDP11_RS05395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS05400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FDP11_RS05400 PF10135 Rod binding protein FDP11_RS05405 PF02119 Flagellar P-ring protein FDP11_RS05410 PF02107 Flagellar L-ring protein FDP11_RS05415 PF00460 Flagella basal body rod protein FDP11_RS05415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS05420 PF00460 Flagella basal body rod protein FDP11_RS05420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS05425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS05425 PF07559 Flagellar basal body protein FlaE FDP11_RS05425 PF00460 Flagella basal body rod protein FDP11_RS05430 PF13861 FlgD Tudor-like domain FDP11_RS05430 PF13860 FlgD Ig-like domain FDP11_RS05430 PF03963 Flagellar hook capping protein - N-terminal region FDP11_RS05435 PF00460 Flagella basal body rod protein FDP11_RS05435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS05440 PF00460 Flagella basal body rod protein FDP11_RS05460 PF01464 Transglycosylase SLT domain FDP11_RS05465 PF08264 Anticodon-binding domain of tRNA FDP11_RS05465 PF00133 tRNA synthetases class I (I, L, M and V) FDP11_RS05485 PF03315 Serine dehydratase beta chain FDP11_RS05485 PF03313 Serine dehydratase alpha chain FDP11_RS05490 PF00854 POT family FDP11_RS05500 PF03466 LysR substrate binding domain FDP11_RS05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS05510 PF03466 LysR substrate binding domain FDP11_RS05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS05515 PF00691 OmpA family FDP11_RS05515 PF01389 OmpA-like transmembrane domain FDP11_RS05520 PF18027 Cytosolic carboxypeptidase N-terminal domain FDP11_RS05520 PF00246 Zinc carboxypeptidase FDP11_RS05525 PF01266 FAD dependent oxidoreductase FDP11_RS05545 PF07702 UTRA domain FDP11_RS05545 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS05555 PF00005 ABC transporter FDP11_RS05565 PF00266 Aminotransferase class-V FDP11_RS05575 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS05580 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS05585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDP11_RS05595 PF03611 PTS system sugar-specific permease component FDP11_RS05605 PF05922 Peptidase inhibitor I9 FDP11_RS05605 PF00082 Subtilase family FDP11_RS05610 PF00657 GDSL-like Lipase/Acylhydrolase FDP11_RS05615 PF02321 Outer membrane efflux protein FDP11_RS05620 PF12704 MacB-like periplasmic core domain FDP11_RS05620 PF00005 ABC transporter FDP11_RS05620 PF02687 FtsX-like permease family FDP11_RS05625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS05630 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDP11_RS05635 PF00194 Eukaryotic-type carbonic anhydrase FDP11_RS05640 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FDP11_RS05655 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS05660 PF03466 LysR substrate binding domain FDP11_RS05695 PF12464 Maltose acetyltransferase FDP11_RS05695 PF14602 Hexapeptide repeat of succinyl-transferase FDP11_RS05700 PF02566 OsmC-like protein FDP11_RS05705 PF01641 SelR domain FDP11_RS05705 PF01625 Peptide methionine sulfoxide reductase FDP11_RS05720 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FDP11_RS05725 PF00875 DNA photolyase FDP11_RS05725 PF03441 FAD binding domain of DNA photolyase FDP11_RS05730 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS05745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS05745 PF00672 HAMP domain FDP11_RS05745 PF12729 Four helix bundle sensory module for signal transduction FDP11_RS05750 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS05750 PF05230 MASE2 domain FDP11_RS05755 PF13532 2OG-Fe(II) oxygenase superfamily FDP11_RS05765 PF01773 Na+ dependent nucleoside transporter N-terminus FDP11_RS05765 PF07670 Nucleoside recognition FDP11_RS05765 PF07662 Na+ dependent nucleoside transporter C-terminus FDP11_RS05780 PF01212 Beta-eliminating lyase FDP11_RS05790 PF01266 FAD dependent oxidoreductase FDP11_RS05805 PF05525 Branched-chain amino acid transport protein FDP11_RS05810 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS05810 PF05230 MASE2 domain FDP11_RS05815 PF00072 Response regulator receiver domain FDP11_RS05815 PF02954 Bacterial regulatory protein, Fis family FDP11_RS05815 PF00158 Sigma-54 interaction domain FDP11_RS05820 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS05820 PF02743 Cache domain FDP11_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS05825 PF00232 Glycosyl hydrolase family 1 FDP11_RS05850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS05850 PF03466 LysR substrate binding domain FDP11_RS05855 PF18030 RimK PreATP-grasp domain FDP11_RS05855 PF08443 RimK-like ATP-grasp domain FDP11_RS05860 PF08443 RimK-like ATP-grasp domain FDP11_RS05860 PF18030 RimK PreATP-grasp domain FDP11_RS05865 PF00753 Metallo-beta-lactamase superfamily FDP11_RS05870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDP11_RS05870 PF17944 Arginine decarboxylase C-terminal helical extension FDP11_RS05870 PF17810 Arginine decarboxylase helical bundle domain FDP11_RS05875 PF00491 Arginase family FDP11_RS05880 PF07690 Major Facilitator Superfamily FDP11_RS05885 PF00326 Prolyl oligopeptidase family FDP11_RS05885 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDP11_RS05900 PF00950 ABC 3 transport family FDP11_RS05905 PF00005 ABC transporter FDP11_RS05910 PF01297 Zinc-uptake complex component A periplasmic FDP11_RS05950 PF02472 Biopolymer transport protein ExbD/TolR FDP11_RS05955 PF01618 MotA/TolQ/ExbB proton channel family FDP11_RS05960 PF01618 MotA/TolQ/ExbB proton channel family FDP11_RS05970 PF00593 TonB dependent receptor FDP11_RS05970 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS05975 PF00672 HAMP domain FDP11_RS05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS05975 PF16750 Sensor domain of 2-component histidine kinase FDP11_RS05975 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS05980 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS05980 PF00072 Response regulator receiver domain FDP11_RS05985 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDP11_RS05985 PF00056 lactate/malate dehydrogenase, NAD binding domain FDP11_RS05990 PF03009 Glycerophosphoryl diester phosphodiesterase family FDP11_RS06000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDP11_RS06000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDP11_RS06005 PF10928 Protein of unknown function (DUF2810) FDP11_RS06055 PF04013 Putative SAM-dependent RNA methyltransferase FDP11_RS06060 PF01523 Putative modulator of DNA gyrase FDP11_RS06065 PF01523 Putative modulator of DNA gyrase FDP11_RS06070 PF08543 Phosphomethylpyrimidine kinase FDP11_RS06075 PF00005 ABC transporter FDP11_RS06080 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS06085 PF09084 NMT1/THI5 like FDP11_RS06090 PF03070 TENA/THI-4/PQQC family FDP11_RS06095 PF02110 Hydroxyethylthiazole kinase family FDP11_RS06100 PF02581 Thiamine monophosphate synthase FDP11_RS06110 PF00384 Molybdopterin oxidoreductase FDP11_RS06110 PF01568 Molydopterin dinucleotide binding domain FDP11_RS06110 PF18364 Molybdopterin oxidoreductase N-terminal domain FDP11_RS06115 PF03264 NapC/NirT cytochrome c family, N-terminal region FDP11_RS06140 PF00583 Acetyltransferase (GNAT) family FDP11_RS06160 PF00155 Aminotransferase class I and II FDP11_RS06160 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS06165 PF02595 Glycerate kinase family FDP11_RS06170 PF02447 GntP family permease FDP11_RS06175 PF17853 GGDEF-like domain FDP11_RS06175 PF05651 Putative sugar diacid recognition FDP11_RS06175 PF13556 PucR C-terminal helix-turn-helix domain FDP11_RS06200 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS06215 PF03466 LysR substrate binding domain FDP11_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS06225 PF03466 LysR substrate binding domain FDP11_RS06230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS06235 PF01661 Macro domain FDP11_RS06240 PF01204 Trehalase FDP11_RS06250 PF12706 Beta-lactamase superfamily domain FDP11_RS06260 PF07690 Major Facilitator Superfamily FDP11_RS06265 PF13533 Biotin-lipoyl like FDP11_RS06270 PF03922 OmpW family FDP11_RS06275 PF13599 Pentapeptide repeats (9 copies) FDP11_RS06290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FDP11_RS06290 PF18416 N-acetylglucosamine binding protein domain 2 FDP11_RS06295 PF01037 Lrp/AsnC ligand binding domain FDP11_RS06300 PF01810 LysE type translocator FDP11_RS06305 PF08021 Siderophore-interacting FAD-binding domain FDP11_RS06305 PF04954 Siderophore-interacting protein FDP11_RS06310 PF14583 Oligogalacturonate lyase FDP11_RS06315 PF00474 Sodium:solute symporter family FDP11_RS06320 PF13229 Right handed beta helix region FDP11_RS06335 PF01081 KDPG and KHG aldolase FDP11_RS06340 PF00294 pfkB family carbohydrate kinase FDP11_RS06355 PF07883 Cupin domain FDP11_RS06360 PF10688 Bacterial inner membrane protein FDP11_RS06370 PF01614 Bacterial transcriptional regulator FDP11_RS06370 PF09339 IclR helix-turn-helix domain FDP11_RS06385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS06385 PF03466 LysR substrate binding domain FDP11_RS06390 PF00797 N-acetyltransferase FDP11_RS06395 PF08240 Alcohol dehydrogenase GroES-like domain FDP11_RS06395 PF00107 Zinc-binding dehydrogenase FDP11_RS06400 PF00756 Putative esterase FDP11_RS06410 PF17152 Periplasmic sensor domain FDP11_RS06410 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS06425 PF03466 LysR substrate binding domain FDP11_RS06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS06440 PF00849 RNA pseudouridylate synthase FDP11_RS06445 PF01554 MatE FDP11_RS06450 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS06450 PF00563 EAL domain FDP11_RS06460 PF06865 Pyrimidine/purine nucleoside phosphorylase FDP11_RS06470 PF08329 Chitinase A, N-terminal domain FDP11_RS06470 PF00704 Glycosyl hydrolases family 18 FDP11_RS06490 PF03600 Citrate transporter FDP11_RS06500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FDP11_RS06510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FDP11_RS06510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDP11_RS06515 PF00730 HhH-GPD superfamily base excision DNA repair protein FDP11_RS06515 PF06029 AlkA N-terminal domain FDP11_RS06525 PF07681 DoxX FDP11_RS06530 PF17954 Quercetinase C-terminal cupin domain FDP11_RS06530 PF02678 Pirin FDP11_RS06535 PF03466 LysR substrate binding domain FDP11_RS06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS06550 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FDP11_RS06560 PF03616 Sodium/glutamate symporter FDP11_RS06565 PF00155 Aminotransferase class I and II FDP11_RS06565 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS06570 PF00005 ABC transporter FDP11_RS06580 PF03616 Sodium/glutamate symporter FDP11_RS06585 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS06600 PF17200 Single Cache domain 2 FDP11_RS06600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS06600 PF00672 HAMP domain FDP11_RS06605 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDP11_RS06615 PF04397 LytTr DNA-binding domain FDP11_RS06615 PF00072 Response regulator receiver domain FDP11_RS06620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS06620 PF07694 5TMR of 5TMR-LYT FDP11_RS06620 PF13492 GAF domain FDP11_RS06620 PF06580 Histidine kinase FDP11_RS06640 PF00005 ABC transporter FDP11_RS06650 PF01098 Cell cycle protein FDP11_RS06655 PF01709 Transcriptional regulator FDP11_RS06665 PF00072 Response regulator receiver domain FDP11_RS06665 PF01627 Hpt domain FDP11_RS06665 PF17149 Periplasmic sensor domain found in signal transduction proteins FDP11_RS06665 PF00672 HAMP domain FDP11_RS06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS06665 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS06675 PF00925 GTP cyclohydrolase II FDP11_RS06675 PF08719 Domain of unknown function (DUF1768) FDP11_RS06685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS06685 PF00005 ABC transporter FDP11_RS06690 PF00005 ABC transporter FDP11_RS06690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS06705 PF18607 ParA helix turn helix domain FDP11_RS06705 PF13614 AAA domain FDP11_RS06710 PF08775 ParB family FDP11_RS06710 PF02195 ParB-like nuclease domain FDP11_RS06715 PF05127 Helicase FDP11_RS06715 PF13718 GNAT acetyltransferase 2 FDP11_RS06725 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS06735 PF03575 Peptidase family S51 FDP11_RS06745 PF00367 phosphotransferase system, EIIB FDP11_RS06745 PF02378 Phosphotransferase system, EIIC FDP11_RS06750 PF01380 SIS domain FDP11_RS06755 PF01418 Helix-turn-helix domain, rpiR family FDP11_RS06755 PF01380 SIS domain FDP11_RS06760 PF00246 Zinc carboxypeptidase FDP11_RS06765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS06770 PF03358 NADPH-dependent FMN reductase FDP11_RS06780 PF00005 ABC transporter FDP11_RS06780 PF03412 Peptidase C39 family FDP11_RS06780 PF00664 ABC transporter transmembrane region FDP11_RS06795 PF00529 HlyD membrane-fusion protein of T1SS FDP11_RS06800 PF02954 Bacterial regulatory protein, Fis family FDP11_RS06800 PF00072 Response regulator receiver domain FDP11_RS06800 PF00158 Sigma-54 interaction domain FDP11_RS06805 PF02743 Cache domain FDP11_RS06805 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS06810 PF01243 Pyridoxamine 5'-phosphate oxidase FDP11_RS06810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FDP11_RS06820 PF12833 Helix-turn-helix domain FDP11_RS06825 PF01619 Proline dehydrogenase FDP11_RS06825 PF14850 DNA-binding domain of Proline dehydrogenase FDP11_RS06825 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FDP11_RS06825 PF00171 Aldehyde dehydrogenase family FDP11_RS06835 PF00474 Sodium:solute symporter family FDP11_RS06870 PF01037 Lrp/AsnC ligand binding domain FDP11_RS06880 PF00005 ABC transporter FDP11_RS06880 PF00664 ABC transporter transmembrane region FDP11_RS06890 PF06719 AraC-type transcriptional regulator N-terminus FDP11_RS06890 PF12833 Helix-turn-helix domain FDP11_RS06905 PF10688 Bacterial inner membrane protein FDP11_RS06910 PF01081 KDPG and KHG aldolase FDP11_RS06915 PF00294 pfkB family carbohydrate kinase FDP11_RS06920 PF02614 Glucuronate isomerase FDP11_RS06925 PF08125 Mannitol dehydrogenase C-terminal domain FDP11_RS06925 PF01232 Mannitol dehydrogenase Rossmann domain FDP11_RS06930 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FDP11_RS06935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FDP11_RS06940 PF03480 Bacterial extracellular solute-binding protein, family 7 FDP11_RS06945 PF07729 FCD domain FDP11_RS06945 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS06950 PF03786 D-mannonate dehydratase (UxuA) FDP11_RS06955 PF00271 Helicase conserved C-terminal domain FDP11_RS06955 PF00270 DEAD/DEAH box helicase FDP11_RS06960 PF03473 MOSC domain FDP11_RS06960 PF03475 3-alpha domain FDP11_RS06975 PF02056 Family 4 glycosyl hydrolase FDP11_RS06975 PF11975 Family 4 glycosyl hydrolase C-terminal domain FDP11_RS06980 PF03466 LysR substrate binding domain FDP11_RS06980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS06985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS06985 PF02743 Cache domain FDP11_RS06985 PF00672 HAMP domain FDP11_RS06995 PF04542 Sigma-70 region 2 FDP11_RS06995 PF08281 Sigma-70, region 4 FDP11_RS07000 PF12833 Helix-turn-helix domain FDP11_RS07000 PF01965 DJ-1/PfpI family FDP11_RS07005 PF03466 LysR substrate binding domain FDP11_RS07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS07020 PF13192 Thioredoxin domain FDP11_RS07020 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS07025 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDP11_RS07025 PF00578 AhpC/TSA family FDP11_RS07030 PF01047 MarR family FDP11_RS07035 PF02566 OsmC-like protein FDP11_RS07050 PF12833 Helix-turn-helix domain FDP11_RS07050 PF02311 AraC-like ligand binding domain FDP11_RS07060 PF02610 L-arabinose isomerase FDP11_RS07060 PF11762 L-arabinose isomerase C-terminal domain FDP11_RS07065 PF00596 Class II Aldolase and Adducin N-terminal domain FDP11_RS07070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDP11_RS07070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDP11_RS07075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDP11_RS07080 PF00005 ABC transporter FDP11_RS07085 PF02653 Branched-chain amino acid transport system / permease component FDP11_RS07100 PF00367 phosphotransferase system, EIIB FDP11_RS07100 PF02378 Phosphotransferase system, EIIC FDP11_RS07105 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS07105 PF00072 Response regulator receiver domain FDP11_RS07110 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS07110 PF08521 Two-component sensor kinase N-terminal FDP11_RS07115 PF01547 Bacterial extracellular solute-binding protein FDP11_RS07120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDP11_RS07120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDP11_RS07125 PF04183 IucA / IucC family FDP11_RS07125 PF06276 Ferric iron reductase FhuF-like transporter FDP11_RS07130 PF07690 Major Facilitator Superfamily FDP11_RS07135 PF04183 IucA / IucC family FDP11_RS07135 PF06276 Ferric iron reductase FhuF-like transporter FDP11_RS07140 PF02655 ATP-grasp domain FDP11_RS07140 PF00206 Lyase FDP11_RS07145 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS07145 PF00593 TonB dependent receptor FDP11_RS07150 PF00593 TonB dependent receptor FDP11_RS07150 PF07660 Secretin and TonB N terminus short domain FDP11_RS07150 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS07155 PF01497 Periplasmic binding protein FDP11_RS07160 PF01032 FecCD transport family FDP11_RS07165 PF01032 FecCD transport family FDP11_RS07170 PF00005 ABC transporter FDP11_RS07175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS07175 PF00672 HAMP domain FDP11_RS07175 PF17200 Single Cache domain 2 FDP11_RS07180 PF00675 Insulinase (Peptidase family M16) FDP11_RS07180 PF05193 Peptidase M16 inactive domain FDP11_RS07190 PF04225 Opacity-associated protein A LysM-like domain FDP11_RS07190 PF01551 Peptidase family M23 FDP11_RS07200 PF07690 Major Facilitator Superfamily FDP11_RS07210 PF00128 Alpha amylase, catalytic domain FDP11_RS07210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDP11_RS07215 PF02264 LamB porin FDP11_RS07230 PF02903 Alpha amylase, N-terminal ig-like domain FDP11_RS07230 PF16657 Maltogenic Amylase, C-terminal domain FDP11_RS07230 PF00128 Alpha amylase, catalytic domain FDP11_RS07235 PF04231 Endonuclease I FDP11_RS07240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDP11_RS07240 PF03714 Bacterial pullanase-associated domain FDP11_RS07240 PF18494 Pullulanase Ins domain FDP11_RS07240 PF11852 Domain of unknown function (DUF3372) FDP11_RS07240 PF17967 Pullulanase N2 domain FDP11_RS07255 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FDP11_RS07255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FDP11_RS07255 PF01276 Orn/Lys/Arg decarboxylase, major domain FDP11_RS07260 PF13520 Amino acid permease FDP11_RS07270 PF08543 Phosphomethylpyrimidine kinase FDP11_RS07280 PF00375 Sodium:dicarboxylate symporter family FDP11_RS07285 PF03193 RsgA GTPase FDP11_RS07290 PF00367 phosphotransferase system, EIIB FDP11_RS07290 PF02378 Phosphotransferase system, EIIC FDP11_RS07300 PF02630 SCO1/SenC FDP11_RS07315 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS07315 PF17874 MalT-like TPR region FDP11_RS07320 PF00343 Carbohydrate phosphorylase FDP11_RS07325 PF02446 4-alpha-glucanotransferase FDP11_RS07330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FDP11_RS07330 PF02806 Alpha amylase, C-terminal all-beta domain FDP11_RS07330 PF00128 Alpha amylase, catalytic domain FDP11_RS07335 PF00912 Transglycosylase FDP11_RS07340 PF00128 Alpha amylase, catalytic domain FDP11_RS07350 PF07670 Nucleoside recognition FDP11_RS07355 PF07670 Nucleoside recognition FDP11_RS07360 PF07687 Peptidase dimerisation domain FDP11_RS07360 PF01546 Peptidase family M20/M25/M40 FDP11_RS07365 PF06803 Protein of unknown function (DUF1232) FDP11_RS07380 PF00375 Sodium:dicarboxylate symporter family FDP11_RS07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS07390 PF03466 LysR substrate binding domain FDP11_RS07395 PF08803 Putative mono-oxygenase ydhR FDP11_RS07410 PF00881 Nitroreductase family FDP11_RS07415 PF01914 MarC family integral membrane protein FDP11_RS07420 PF01734 Patatin-like phospholipase FDP11_RS07425 PF18416 N-acetylglucosamine binding protein domain 2 FDP11_RS07425 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FDP11_RS07440 PF00561 alpha/beta hydrolase fold FDP11_RS07445 PF07943 Penicillin-binding protein 5, C-terminal domain FDP11_RS07445 PF00768 D-alanyl-D-alanine carboxypeptidase FDP11_RS07450 PF00128 Alpha amylase, catalytic domain FDP11_RS07450 PF00686 Starch binding domain FDP11_RS07455 PF12833 Helix-turn-helix domain FDP11_RS07455 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FDP11_RS07460 PF00881 Nitroreductase family FDP11_RS07470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS07470 PF03466 LysR substrate binding domain FDP11_RS07475 PF09905 DNA-binding protein VF530 FDP11_RS07485 PF00175 Oxidoreductase NAD-binding domain FDP11_RS07485 PF00970 Oxidoreductase FAD-binding domain FDP11_RS07495 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDP11_RS07500 PF01594 AI-2E family transporter FDP11_RS07510 PF13533 Biotin-lipoyl like FDP11_RS07530 PF00892 EamA-like transporter family FDP11_RS07535 PF03466 LysR substrate binding domain FDP11_RS07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS07540 PF07690 Major Facilitator Superfamily FDP11_RS07555 PF00583 Acetyltransferase (GNAT) family FDP11_RS07565 PF00923 Transaldolase/Fructose-6-phosphate aldolase FDP11_RS07570 PF04055 Radical SAM superfamily FDP11_RS07575 PF02901 Pyruvate formate lyase-like FDP11_RS07575 PF01228 Glycine radical FDP11_RS07595 PF08000 Bacterial PH domain FDP11_RS07605 PF00691 OmpA family FDP11_RS07605 PF13677 Membrane MotB of proton-channel complex MotA/MotB FDP11_RS07610 PF01618 MotA/TolQ/ExbB proton channel family FDP11_RS07615 PF04545 Sigma-70, region 4 FDP11_RS07615 PF04542 Sigma-70 region 2 FDP11_RS07620 PF03748 Flagellar basal body-associated protein FliL FDP11_RS07635 PF02561 Flagellar protein FliS FDP11_RS07640 PF07196 Flagellin hook IN motif FDP11_RS07640 PF07195 Flagellar hook-associated protein 2 C-terminus FDP11_RS07640 PF02465 Flagellar hook-associated protein 2 N-terminus FDP11_RS07655 PF00669 Bacterial flagellin N-terminal helical region FDP11_RS07655 PF00700 Bacterial flagellin C-terminal helical region FDP11_RS07665 PF00771 FHIPEP family FDP11_RS07670 PF01312 FlhB HrpN YscU SpaS Family FDP11_RS07675 PF01311 Bacterial export proteins, family 1 FDP11_RS07680 PF01313 Bacterial export proteins, family 3 FDP11_RS07685 PF00813 FliP family FDP11_RS07690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDP11_RS07705 PF02954 Bacterial regulatory protein, Fis family FDP11_RS07705 PF00072 Response regulator receiver domain FDP11_RS07705 PF00158 Sigma-54 interaction domain FDP11_RS07710 PF02049 Flagellar hook-basal body complex protein FliE FDP11_RS07715 PF01514 Secretory protein of YscJ/FliF family FDP11_RS07715 PF08345 Flagellar M-ring protein C-terminal FDP11_RS07720 PF01706 FliG C-terminal domain FDP11_RS07720 PF14841 FliG middle domain FDP11_RS07720 PF14842 FliG N-terminal domain FDP11_RS07730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDP11_RS07730 PF18269 T3SS EscN ATPase C-terminal domain FDP11_RS07745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS07745 PF03466 LysR substrate binding domain FDP11_RS07780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS07785 PF03466 LysR substrate binding domain FDP11_RS07805 PF00072 Response regulator receiver domain FDP11_RS07805 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS07810 PF08448 PAS fold FDP11_RS07810 PF13426 PAS domain FDP11_RS07810 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS07810 PF00072 Response regulator receiver domain FDP11_RS07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS07815 PF00080 Copper/zinc superoxide dismutase (SODC) FDP11_RS07820 PF00266 Aminotransferase class-V FDP11_RS07825 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS07830 PF00563 EAL domain FDP11_RS07830 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS07830 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS07835 PF00155 Aminotransferase class I and II FDP11_RS07840 PF00107 Zinc-binding dehydrogenase FDP11_RS07840 PF08240 Alcohol dehydrogenase GroES-like domain FDP11_RS07870 PF00194 Eukaryotic-type carbonic anhydrase FDP11_RS07875 PF00924 Mechanosensitive ion channel FDP11_RS07885 PF01070 FMN-dependent dehydrogenase FDP11_RS07890 PF02652 L-lactate permease FDP11_RS07895 PF03466 LysR substrate binding domain FDP11_RS07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS07900 PF00326 Prolyl oligopeptidase family FDP11_RS07900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDP11_RS07905 PF00005 ABC transporter FDP11_RS07905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS07915 PF05362 Lon protease (S16) C-terminal proteolytic domain FDP11_RS07915 PF13654 AAA domain FDP11_RS07920 PF00672 HAMP domain FDP11_RS07920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS07925 PF12945 Flagellar protein YcgR FDP11_RS07925 PF07238 PilZ domain FDP11_RS07940 PF00583 Acetyltransferase (GNAT) family FDP11_RS07945 PF12800 4Fe-4S binding domain FDP11_RS07945 PF12838 4Fe-4S dicluster domain FDP11_RS07950 PF13237 4Fe-4S dicluster domain FDP11_RS07950 PF12801 4Fe-4S binding domain FDP11_RS07965 PF12558 ATP-binding cassette cobalt transporter FDP11_RS07965 PF00005 ABC transporter FDP11_RS07970 PF07155 ECF-type riboflavin transporter, S component FDP11_RS07975 PF00529 HlyD membrane-fusion protein of T1SS FDP11_RS07975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS07980 PF11742 Protein of unknown function (DUF3302) FDP11_RS07985 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS08000 PF01048 Phosphorylase superfamily FDP11_RS08005 PF08349 Protein of unknown function (DUF1722) FDP11_RS08010 PF13411 MerR HTH family regulatory protein FDP11_RS08015 PF00875 DNA photolyase FDP11_RS08015 PF03441 FAD binding domain of DNA photolyase FDP11_RS08020 PF17969 L,D-transpeptidase C-terminal domain FDP11_RS08020 PF01476 LysM domain FDP11_RS08020 PF03734 L,D-transpeptidase catalytic domain FDP11_RS08030 PF00270 DEAD/DEAH box helicase FDP11_RS08030 PF00271 Helicase conserved C-terminal domain FDP11_RS08035 PF00326 Prolyl oligopeptidase family FDP11_RS08035 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FDP11_RS08040 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS08040 PF00593 TonB dependent receptor FDP11_RS08065 PF00589 Phage integrase family FDP11_RS08065 PF02899 Phage integrase, N-terminal SAM-like domain FDP11_RS08070 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS08075 PF08495 FIST N domain FDP11_RS08075 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS08075 PF10442 FIST C domain FDP11_RS08075 PF00563 EAL domain FDP11_RS08100 PF12146 Serine aminopeptidase, S33 FDP11_RS08105 PF01810 LysE type translocator FDP11_RS08110 PF08668 HDOD domain FDP11_RS08110 PF00563 EAL domain FDP11_RS08115 PF01022 Bacterial regulatory protein, arsR family FDP11_RS08120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDP11_RS08120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDP11_RS08170 PF01914 MarC family integral membrane protein FDP11_RS08185 PF02881 SRP54-type protein, helical bundle domain FDP11_RS08185 PF00448 SRP54-type protein, GTPase domain FDP11_RS08190 PF00005 ABC transporter FDP11_RS08195 PF18075 FtsX extracellular domain FDP11_RS08200 PF04542 Sigma-70 region 2 FDP11_RS08200 PF00140 Sigma-70 factor, region 1.2 FDP11_RS08200 PF04545 Sigma-70, region 4 FDP11_RS08205 PF00581 Rhodanese-like domain FDP11_RS08210 PF01694 Rhomboid family FDP11_RS08210 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FDP11_RS08215 PF03748 Flagellar basal body-associated protein FliL FDP11_RS08220 PF04345 Chorismate lyase FDP11_RS08225 PF01040 UbiA prenyltransferase family FDP11_RS08230 PF01553 Acyltransferase FDP11_RS08235 PF01726 LexA DNA binding domain FDP11_RS08235 PF00717 Peptidase S24-like FDP11_RS08240 PF04072 Leucine carboxyl methyltransferase FDP11_RS08245 PF01554 MatE FDP11_RS08250 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS08250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDP11_RS08255 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS08265 PF05958 tRNA (Uracil-5-)-methyltransferase FDP11_RS08270 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS08270 PF00593 TonB dependent receptor FDP11_RS08280 PF01177 Asp/Glu/Hydantoin racemase FDP11_RS08310 PF13091 PLD-like domain FDP11_RS08320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FDP11_RS08320 PF01565 FAD binding domain FDP11_RS08325 PF08279 HTH domain FDP11_RS08325 PF03099 Biotin/lipoate A/B protein ligase family FDP11_RS08325 PF02237 Biotin protein ligase C terminal domain FDP11_RS08330 PF00485 Phosphoribulokinase / Uridine kinase family FDP11_RS08355 PF00009 Elongation factor Tu GTP binding domain FDP11_RS08355 PF03144 Elongation factor Tu domain 2 FDP11_RS08355 PF03143 Elongation factor Tu C-terminal domain FDP11_RS08360 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FDP11_RS08365 PF00467 KOW motif FDP11_RS08365 PF02357 Transcription termination factor nusG FDP11_RS08370 PF03946 Ribosomal protein L11, N-terminal domain FDP11_RS08370 PF00298 Ribosomal protein L11, RNA binding domain FDP11_RS08375 PF00687 Ribosomal protein L1p/L10e family FDP11_RS08380 PF00466 Ribosomal protein L10 FDP11_RS08385 PF00542 Ribosomal protein L7/L12 C-terminal domain FDP11_RS08385 PF16320 Ribosomal protein L7/L12 dimerisation domain FDP11_RS08390 PF04560 RNA polymerase Rpb2, domain 7 FDP11_RS08390 PF04565 RNA polymerase Rpb2, domain 3 FDP11_RS08390 PF04561 RNA polymerase Rpb2, domain 2 FDP11_RS08390 PF04563 RNA polymerase beta subunit FDP11_RS08390 PF00562 RNA polymerase Rpb2, domain 6 FDP11_RS08390 PF10385 RNA polymerase beta subunit external 1 domain FDP11_RS08395 PF00623 RNA polymerase Rpb1, domain 2 FDP11_RS08395 PF04983 RNA polymerase Rpb1, domain 3 FDP11_RS08395 PF05000 RNA polymerase Rpb1, domain 4 FDP11_RS08395 PF04998 RNA polymerase Rpb1, domain 5 FDP11_RS08395 PF04997 RNA polymerase Rpb1, domain 1 FDP11_RS08400 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FDP11_RS08405 PF00293 NUDIX domain FDP11_RS08405 PF09297 NADH pyrophosphatase zinc ribbon domain FDP11_RS08420 PF01208 Uroporphyrinogen decarboxylase (URO-D) FDP11_RS08425 PF03167 Uracil DNA glycosylase superfamily FDP11_RS08430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDP11_RS08435 PF04222 Protein of unknown function (DUF416) FDP11_RS08440 PF01595 Cyclin M transmembrane N-terminal domain FDP11_RS08440 PF00571 CBS domain FDP11_RS08445 PF00216 Bacterial DNA-binding protein FDP11_RS08455 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FDP11_RS08455 PF02843 Phosphoribosylglycinamide synthetase, C domain FDP11_RS08455 PF02844 Phosphoribosylglycinamide synthetase, N domain FDP11_RS08460 PF02142 MGS-like domain FDP11_RS08460 PF01808 AICARFT/IMPCHase bienzyme FDP11_RS08465 PF13411 MerR HTH family regulatory protein FDP11_RS08470 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS08470 PF18500 CadC C-terminal domain 1 FDP11_RS08475 PF13520 Amino acid permease FDP11_RS08480 PF01276 Orn/Lys/Arg decarboxylase, major domain FDP11_RS08480 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FDP11_RS08480 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FDP11_RS08570 PF13358 DDE superfamily endonuclease FDP11_RS08575 PF05230 MASE2 domain FDP11_RS08575 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS08580 PF12848 ABC transporter FDP11_RS08580 PF00005 ABC transporter FDP11_RS08585 PF07690 Major Facilitator Superfamily FDP11_RS08590 PF02954 Bacterial regulatory protein, Fis family FDP11_RS08595 PF01207 Dihydrouridine synthase (Dus) FDP11_RS08605 PF02785 Biotin carboxylase C-terminal domain FDP11_RS08605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDP11_RS08605 PF00289 Biotin carboxylase, N-terminal domain FDP11_RS08610 PF00364 Biotin-requiring enzyme FDP11_RS08615 PF01220 Dehydroquinase class II FDP11_RS08620 PF13193 AMP-binding enzyme C-terminal domain FDP11_RS08620 PF00501 AMP-binding enzyme FDP11_RS08620 PF16177 Acetyl-coenzyme A synthetase N-terminus FDP11_RS08635 PF12832 MFS_1 like family FDP11_RS08640 PF00672 HAMP domain FDP11_RS08640 PF00072 Response regulator receiver domain FDP11_RS08640 PF01627 Hpt domain FDP11_RS08640 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS08645 PF00206 Lyase FDP11_RS08645 PF10415 Fumarase C C-terminus FDP11_RS08660 PF00474 Sodium:solute symporter family FDP11_RS08670 PF03471 Transporter associated domain FDP11_RS08670 PF00999 Sodium/hydrogen exchanger family FDP11_RS08670 PF02080 TrkA-C domain FDP11_RS08675 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS08675 PF00072 Response regulator receiver domain FDP11_RS08680 PF02683 Cytochrome C biogenesis protein transmembrane region FDP11_RS08680 PF11412 Disulphide bond corrector protein DsbC FDP11_RS08685 PF03605 Anaerobic c4-dicarboxylate membrane transporter FDP11_RS08690 PF10415 Fumarase C C-terminus FDP11_RS08690 PF00206 Lyase FDP11_RS08695 PF04186 FxsA cytoplasmic membrane protein FDP11_RS08700 PF00588 SpoU rRNA Methylase family FDP11_RS08705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDP11_RS08705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDP11_RS08710 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS08710 PF00672 HAMP domain FDP11_RS08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS08710 PF16527 Two-component sensor protein CpxA, periplasmic domain FDP11_RS08715 PF00072 Response regulator receiver domain FDP11_RS08715 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS08720 PF07813 LTXXQ motif family protein FDP11_RS08725 PF01545 Cation efflux family FDP11_RS08725 PF16916 Dimerisation domain of Zinc Transporter FDP11_RS08730 PF00365 Phosphofructokinase FDP11_RS08735 PF01554 MatE FDP11_RS08740 PF00166 Chaperonin 10 Kd subunit FDP11_RS08745 PF00118 TCP-1/cpn60 chaperonin family FDP11_RS08755 PF02308 MgtC family FDP11_RS08760 PF01168 Alanine racemase, N-terminal domain FDP11_RS08760 PF00842 Alanine racemase, C-terminal domain FDP11_RS08765 PF04055 Radical SAM superfamily FDP11_RS08770 PF08207 Elongation factor P (EF-P) KOW-like domain FDP11_RS08770 PF09285 Elongation factor P, C-terminal FDP11_RS08770 PF01132 Elongation factor P (EF-P) OB domain FDP11_RS08780 PF02313 Fumarate reductase subunit D FDP11_RS08785 PF02300 Fumarate reductase subunit C FDP11_RS08790 PF13085 2Fe-2S iron-sulfur cluster binding domain FDP11_RS08790 PF13183 4Fe-4S dicluster domain FDP11_RS08795 PF02910 Fumarate reductase flavoprotein C-term FDP11_RS08795 PF00890 FAD binding domain FDP11_RS08800 PF00152 tRNA synthetases class II (D, K and N) FDP11_RS08810 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS08810 PF08360 QacR-like protein, C-terminal region FDP11_RS08820 PF01551 Peptidase family M23 FDP11_RS08825 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS08825 PF06426 Serine acetyltransferase, N-terminal FDP11_RS08830 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FDP11_RS08830 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FDP11_RS08835 PF02556 Preprotein translocase subunit SecB FDP11_RS08840 PF00581 Rhodanese-like domain FDP11_RS08845 PF01676 Metalloenzyme superfamily FDP11_RS08845 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FDP11_RS08855 PF00672 HAMP domain FDP11_RS08855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS08860 PF00939 Sodium:sulfate symporter transmembrane region FDP11_RS08865 PF02666 Phosphatidylserine decarboxylase FDP11_RS08870 PF03193 RsgA GTPase FDP11_RS08875 PF00929 Exonuclease FDP11_RS08945 PF08331 Domain of unknown function (DUF1730) FDP11_RS08950 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FDP11_RS08955 PF01520 N-acetylmuramoyl-L-alanine amidase FDP11_RS08960 PF08676 MutL C terminal dimerisation domain FDP11_RS08960 PF01119 DNA mismatch repair protein, C-terminal domain FDP11_RS08970 PF17209 Hfq protein FDP11_RS08975 PF16360 GTP-binding GTPase Middle Region FDP11_RS08975 PF01926 50S ribosome-binding GTPase FDP11_RS08975 PF13167 GTP-binding GTPase N-terminal FDP11_RS08980 PF12221 Bacterial membrane protein N terminal FDP11_RS08980 PF01145 SPFH domain / Band 7 family FDP11_RS08985 PF01145 SPFH domain / Band 7 family FDP11_RS08990 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FDP11_RS08995 PF00709 Adenylosuccinate synthetase FDP11_RS09000 PF08238 Sel1 repeat FDP11_RS09005 PF00175 Oxidoreductase NAD-binding domain FDP11_RS09005 PF00970 Oxidoreductase FAD-binding domain FDP11_RS09005 PF00042 Globin FDP11_RS09010 PF02082 Transcriptional regulator FDP11_RS09015 PF08206 Ribonuclease B OB domain FDP11_RS09015 PF00575 S1 RNA binding domain FDP11_RS09015 PF00773 RNB domain FDP11_RS09015 PF08461 Ribonuclease R winged-helix domain FDP11_RS09015 PF17876 Cold shock domain FDP11_RS09020 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDP11_RS09020 PF00588 SpoU rRNA Methylase family FDP11_RS09025 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS09030 PF00579 tRNA synthetases class I (W and Y) FDP11_RS09045 PF00117 Glutamine amidotransferase class-I FDP11_RS09050 PF00202 Aminotransferase class-III FDP11_RS09055 PF04958 Arginine N-succinyltransferase beta subunit FDP11_RS09060 PF00171 Aldehyde dehydrogenase family FDP11_RS09070 PF00027 Cyclic nucleotide-binding domain FDP11_RS09070 PF13545 Crp-like helix-turn-helix domain FDP11_RS09075 PF00485 Phosphoribulokinase / Uridine kinase family FDP11_RS09080 PF06794 Uncharacterised protein family (UPF0270) FDP11_RS09085 PF00561 alpha/beta hydrolase fold FDP11_RS09095 PF12848 ABC transporter FDP11_RS09095 PF00005 ABC transporter FDP11_RS09100 PF02525 Flavodoxin-like fold FDP11_RS09105 PF02254 TrkA-N domain FDP11_RS09105 PF00999 Sodium/hydrogen exchanger family FDP11_RS09115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDP11_RS09120 PF01112 Asparaginase FDP11_RS09125 PF04102 SlyX FDP11_RS09135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDP11_RS09135 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDP11_RS09140 PF13309 HTH domain FDP11_RS09140 PF08348 YheO-like PAS domain FDP11_RS09145 PF02635 DsrE/DsrF-like family FDP11_RS09150 PF02635 DsrE/DsrF-like family FDP11_RS09155 PF04077 DsrH like protein FDP11_RS09160 PF00164 Ribosomal protein S12/S23 FDP11_RS09165 PF00177 Ribosomal protein S7p/S5e FDP11_RS09170 PF03144 Elongation factor Tu domain 2 FDP11_RS09170 PF00009 Elongation factor Tu GTP binding domain FDP11_RS09170 PF03764 Elongation factor G, domain IV FDP11_RS09170 PF00679 Elongation factor G C-terminus FDP11_RS09170 PF14492 Elongation Factor G, domain II FDP11_RS09175 PF00009 Elongation factor Tu GTP binding domain FDP11_RS09175 PF03144 Elongation factor Tu domain 2 FDP11_RS09175 PF03143 Elongation factor Tu C-terminal domain FDP11_RS09180 PF04324 BFD-like [2Fe-2S] binding domain FDP11_RS09185 PF00210 Ferritin-like domain FDP11_RS09190 PF03949 Malic enzyme, NAD binding domain FDP11_RS09190 PF00390 Malic enzyme, N-terminal domain FDP11_RS09195 PF01340 Met Apo-repressor, MetJ FDP11_RS09200 PF01053 Cys/Met metabolism PLP-dependent enzyme FDP11_RS09205 PF00742 Homoserine dehydrogenase FDP11_RS09205 PF03447 Homoserine dehydrogenase, NAD binding domain FDP11_RS09205 PF00696 Amino acid kinase family FDP11_RS09210 PF02219 Methylenetetrahydrofolate reductase FDP11_RS09220 PF00311 Phosphoenolpyruvate carboxylase FDP11_RS09225 PF01546 Peptidase family M20/M25/M40 FDP11_RS09225 PF07687 Peptidase dimerisation domain FDP11_RS09230 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDP11_RS09230 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDP11_RS09235 PF00696 Amino acid kinase family FDP11_RS09240 PF00764 Arginosuccinate synthase FDP11_RS09245 PF00583 Acetyltransferase (GNAT) family FDP11_RS09245 PF00206 Lyase FDP11_RS09245 PF14698 Argininosuccinate lyase C-terminal FDP11_RS09255 PF00462 Glutaredoxin FDP11_RS09255 PF08534 Redoxin FDP11_RS09260 PF03466 LysR substrate binding domain FDP11_RS09260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS09265 PF17092 Penicillin-binding protein OB-like domain FDP11_RS09265 PF00912 Transglycosylase FDP11_RS09265 PF00905 Penicillin binding protein transpeptidase domain FDP11_RS09290 PF11741 AMIN domain FDP11_RS09290 PF00263 Bacterial type II and III secretion system protein FDP11_RS09290 PF07660 Secretin and TonB N terminus short domain FDP11_RS09290 PF03958 Bacterial type II/III secretion system short domain FDP11_RS09295 PF01202 Shikimate kinase FDP11_RS09300 PF01761 3-dehydroquinate synthase FDP11_RS09310 PF02086 D12 class N6 adenine-specific DNA methyltransferase FDP11_RS09315 PF00834 Ribulose-phosphate 3 epimerase family FDP11_RS09320 PF01250 Ribosomal protein S6 FDP11_RS09325 PF00436 Single-strand binding protein family FDP11_RS09330 PF01084 Ribosomal protein S18 FDP11_RS09335 PF03948 Ribosomal protein L9, C-terminal domain FDP11_RS09335 PF01281 Ribosomal protein L9, N-terminal domain FDP11_RS09345 PF03796 DnaB-like helicase C terminal domain FDP11_RS09345 PF00772 DnaB-like helicase N terminal domain FDP11_RS09350 PF00842 Alanine racemase, C-terminal domain FDP11_RS09350 PF01168 Alanine racemase, N-terminal domain FDP11_RS09395 PF07804 HipA-like C-terminal domain FDP11_RS09395 PF13657 HipA N-terminal domain FDP11_RS09455 PF00342 Phosphoglucose isomerase FDP11_RS09465 PF01475 Ferric uptake regulator family FDP11_RS09470 PF01207 Dihydrouridine synthase (Dus) FDP11_RS09490 PF00175 Oxidoreductase NAD-binding domain FDP11_RS09490 PF00667 FAD binding domain FDP11_RS09490 PF00258 Flavodoxin FDP11_RS09495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FDP11_RS09495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FDP11_RS09500 PF01507 Phosphoadenosine phosphosulfate reductase family FDP11_RS09560 PF00999 Sodium/hydrogen exchanger family FDP11_RS09565 PF02965 Vitamin B12 dependent methionine synthase, activation domain FDP11_RS09565 PF00809 Pterin binding enzyme FDP11_RS09565 PF02607 B12 binding domain FDP11_RS09565 PF02310 B12 binding domain FDP11_RS09565 PF02574 Homocysteine S-methyltransferase FDP11_RS09570 PF00696 Amino acid kinase family FDP11_RS09570 PF01842 ACT domain FDP11_RS09575 PF00266 Aminotransferase class-V FDP11_RS09585 PF17760 UvrA interaction domain FDP11_RS09585 PF17755 UvrA DNA-binding domain FDP11_RS09585 PF00005 ABC transporter FDP11_RS09590 PF00483 Nucleotidyl transferase FDP11_RS09595 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS09600 PF00436 Single-strand binding protein family FDP11_RS09605 PF17157 Gammaproteobacterial periplasmic sensor domain FDP11_RS09605 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS09605 PF00563 EAL domain FDP11_RS09625 PF07660 Secretin and TonB N terminus short domain FDP11_RS09625 PF11741 AMIN domain FDP11_RS09625 PF00263 Bacterial type II and III secretion system protein FDP11_RS09625 PF03958 Bacterial type II/III secretion system short domain FDP11_RS09630 PF13401 AAA domain FDP11_RS09630 PF01471 Putative peptidoglycan binding domain FDP11_RS09640 PF00437 Type II/IV secretion system protein FDP11_RS09640 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDP11_RS09645 PF00482 Type II secretion system (T2SS), protein F FDP11_RS09655 PF00114 Pilin (bacterial filament) FDP11_RS09655 PF07963 Prokaryotic N-terminal methylation motif FDP11_RS09695 PF04085 rod shape-determining protein MreC FDP11_RS09700 PF04093 rod shape-determining protein MreD FDP11_RS09705 PF02545 Maf-like protein FDP11_RS09710 PF10150 Ribonuclease E/G family FDP11_RS09710 PF00575 S1 RNA binding domain FDP11_RS09715 PF13116 Protein of unknown function FDP11_RS09715 PF13502 AsmA-like C-terminal region FDP11_RS09720 PF00795 Carbon-nitrogen hydrolase FDP11_RS09725 PF01523 Putative modulator of DNA gyrase FDP11_RS09730 PF02562 PhoH-like protein FDP11_RS09730 PF13638 PIN domain FDP11_RS09735 PF00176 SNF2 family N-terminal domain FDP11_RS09735 PF18337 RapA N-terminal Tudor like domain FDP11_RS09735 PF18339 RapA N-terminal Tudor like domain 1 FDP11_RS09735 PF00271 Helicase conserved C-terminal domain FDP11_RS09735 PF12137 RNA polymerase recycling family C-terminal FDP11_RS09745 PF00849 RNA pseudouridylate synthase FDP11_RS09750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDP11_RS09750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDP11_RS09755 PF04751 Protein of unknown function (DUF615) FDP11_RS09760 PF01523 Putative modulator of DNA gyrase FDP11_RS09765 PF01769 Divalent cation transporter FDP11_RS09765 PF03448 MgtE intracellular N domain FDP11_RS09765 PF00571 CBS domain FDP11_RS09770 PF00381 PTS HPr component phosphorylation site FDP11_RS09775 PF03668 P-loop ATPase protein family FDP11_RS09780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDP11_RS09785 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDP11_RS09790 PF04552 Sigma-54, DNA binding domain FDP11_RS09790 PF04963 Sigma-54 factor, core binding domain FDP11_RS09790 PF00309 Sigma-54 factor, Activator interacting domain (AID) FDP11_RS09795 PF12399 Branched-chain amino acid ATP-binding cassette transporter FDP11_RS09795 PF00005 ABC transporter FDP11_RS09800 PF03968 OstA-like protein FDP11_RS09810 PF01380 SIS domain FDP11_RS09810 PF00571 CBS domain FDP11_RS09815 PF01699 Sodium/calcium exchanger protein FDP11_RS09820 PF00005 ABC transporter FDP11_RS09825 PF02405 Permease MlaE FDP11_RS09830 PF02470 MlaD protein FDP11_RS09835 PF05494 MlaC protein FDP11_RS09845 PF01722 BolA-like protein FDP11_RS09850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDP11_RS09855 PF01553 Acyltransferase FDP11_RS09860 PF01042 Endoribonuclease L-PSP FDP11_RS09865 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FDP11_RS09865 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FDP11_RS09870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDP11_RS09870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDP11_RS09880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FDP11_RS09880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FDP11_RS09890 PF06877 Regulator of ribonuclease activity B FDP11_RS09900 PF00583 Acetyltransferase (GNAT) family FDP11_RS09910 PF00133 tRNA synthetases class I (I, L, M and V) FDP11_RS09910 PF10458 Valyl tRNA synthetase tRNA binding arm FDP11_RS09910 PF08264 Anticodon-binding domain of tRNA FDP11_RS09915 PF04364 DNA polymerase III chi subunit, HolC FDP11_RS09920 PF02789 Cytosol aminopeptidase family, N-terminal domain FDP11_RS09920 PF00883 Cytosol aminopeptidase family, catalytic domain FDP11_RS09925 PF03739 Lipopolysaccharide export system permease LptF/LptG FDP11_RS09930 PF03739 Lipopolysaccharide export system permease LptF/LptG FDP11_RS09940 PF10011 Predicted membrane protein (DUF2254) FDP11_RS09945 PF00106 short chain dehydrogenase FDP11_RS09955 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS09955 PF08360 QacR-like protein, C-terminal region FDP11_RS09965 PF13533 Biotin-lipoyl like FDP11_RS09975 PF01522 Polysaccharide deacetylase FDP11_RS09980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDP11_RS09985 PF02378 Phosphotransferase system, EIIC FDP11_RS09990 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FDP11_RS09995 PF02056 Family 4 glycosyl hydrolase FDP11_RS09995 PF11975 Family 4 glycosyl hydrolase C-terminal domain FDP11_RS10000 PF04794 YdjC-like protein FDP11_RS10005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDP11_RS10005 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS10010 PF00072 Response regulator receiver domain FDP11_RS10055 PF00171 Aldehyde dehydrogenase family FDP11_RS10085 PF00672 HAMP domain FDP11_RS10085 PF17200 Single Cache domain 2 FDP11_RS10085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS10125 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FDP11_RS10125 PF01464 Transglycosylase SLT domain FDP11_RS10130 PF04362 Bacterial Fe(2+) trafficking FDP11_RS10135 PF00730 HhH-GPD superfamily base excision DNA repair protein FDP11_RS10135 PF00633 Helix-hairpin-helix motif FDP11_RS10135 PF14815 NUDIX domain FDP11_RS10140 PF02390 Putative methyltransferase FDP11_RS10145 PF02086 D12 class N6 adenine-specific DNA methyltransferase FDP11_RS10150 PF04960 Glutaminase FDP11_RS10155 PF06969 HemN C-terminal domain FDP11_RS10155 PF04055 Radical SAM superfamily FDP11_RS10160 PF01725 Ham1 family FDP11_RS10170 PF02594 Uncharacterised ACR, YggU family COG1872 FDP11_RS10175 PF02325 YGGT family FDP11_RS10180 PF14748 Pyrroline-5-carboxylate reductase dimerisation FDP11_RS10180 PF03807 NADP oxidoreductase coenzyme F420-dependent FDP11_RS10185 PF01168 Alanine racemase, N-terminal domain FDP11_RS10190 PF00437 Type II/IV secretion system protein FDP11_RS10195 PF00437 Type II/IV secretion system protein FDP11_RS10200 PF03652 Holliday junction resolvase FDP11_RS10205 PF02622 Uncharacterized ACR, COG1678 FDP11_RS10210 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FDP11_RS10210 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FDP11_RS10215 PF04452 RNA methyltransferase FDP11_RS10220 PF04231 Endonuclease I FDP11_RS10225 PF17283 SprT-like zinc ribbon domain FDP11_RS10225 PF10263 SprT-like family FDP11_RS10235 PF02772 S-adenosylmethionine synthetase, central domain FDP11_RS10235 PF00438 S-adenosylmethionine synthetase, N-terminal domain FDP11_RS10235 PF02773 S-adenosylmethionine synthetase, C-terminal domain FDP11_RS10240 PF02779 Transketolase, pyrimidine binding domain FDP11_RS10240 PF02780 Transketolase, C-terminal domain FDP11_RS10240 PF00456 Transketolase, thiamine diphosphate binding domain FDP11_RS10245 PF03466 LysR substrate binding domain FDP11_RS10245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS10250 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS10250 PF00593 TonB dependent receptor FDP11_RS10255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDP11_RS10255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDP11_RS10260 PF00162 Phosphoglycerate kinase FDP11_RS10265 PF01116 Fructose-bisphosphate aldolase class-II FDP11_RS10270 PF05552 Conserved TM helix FDP11_RS10270 PF00924 Mechanosensitive ion channel FDP11_RS10275 PF04073 Aminoacyl-tRNA editing domain FDP11_RS10280 PF01810 LysE type translocator FDP11_RS10285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS10285 PF03466 LysR substrate binding domain FDP11_RS10290 PF04402 Protein of unknown function (DUF541) FDP11_RS10295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDP11_RS10295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDP11_RS10295 PF01842 ACT domain FDP11_RS10300 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FDP11_RS10305 PF01812 5-formyltetrahydrofolate cyclo-ligase family FDP11_RS10315 PF05164 Cell division protein ZapA FDP11_RS10320 PF03695 Uncharacterised protein family (UPF0149) FDP11_RS10325 PF01494 FAD binding domain FDP11_RS10330 PF01494 FAD binding domain FDP11_RS10345 PF01571 Aminomethyltransferase folate-binding domain FDP11_RS10350 PF03937 Flavinator of succinate dehydrogenase FDP11_RS10355 PF00890 FAD binding domain FDP11_RS10355 PF02910 Fumarate reductase flavoprotein C-term FDP11_RS10360 PF04542 Sigma-70 region 2 FDP11_RS10360 PF08281 Sigma-70, region 4 FDP11_RS10365 PF03873 Anti sigma-E protein RseA, C-terminal domain FDP11_RS10365 PF03872 Anti sigma-E protein RseA, N-terminal domain FDP11_RS10370 PF03888 MucB/RseB N-terminal domain FDP11_RS10370 PF17188 MucB/RseB C-terminal domain FDP11_RS10380 PF00679 Elongation factor G C-terminus FDP11_RS10380 PF00009 Elongation factor Tu GTP binding domain FDP11_RS10380 PF03144 Elongation factor Tu domain 2 FDP11_RS10380 PF06421 GTP-binding protein LepA C-terminus FDP11_RS10385 PF10502 Signal peptidase, peptidase S26 FDP11_RS10390 PF00035 Double-stranded RNA binding motif FDP11_RS10390 PF14622 Ribonuclease-III-like FDP11_RS10395 PF07650 KH domain FDP11_RS10395 PF01926 50S ribosome-binding GTPase FDP11_RS10400 PF02565 Recombination protein O C terminal FDP11_RS10400 PF11967 Recombination protein O N terminal FDP11_RS10405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FDP11_RS10410 PF01648 4'-phosphopantetheinyl transferase superfamily FDP11_RS10415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDP11_RS10415 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS10415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS10415 PF01627 Hpt domain FDP11_RS10415 PF00072 Response regulator receiver domain FDP11_RS10415 PF00672 HAMP domain FDP11_RS10420 PF05958 tRNA (Uracil-5-)-methyltransferase FDP11_RS10420 PF01938 TRAM domain FDP11_RS10425 PF13291 ACT domain FDP11_RS10425 PF02824 TGS domain FDP11_RS10425 PF04607 Region found in RelA / SpoT proteins FDP11_RS10430 PF03819 MazG nucleotide pyrophosphohydrolase domain FDP11_RS10435 PF00117 Glutamine amidotransferase class-I FDP11_RS10435 PF06418 CTP synthase N-terminus FDP11_RS10440 PF03952 Enolase, N-terminal domain FDP11_RS10440 PF00113 Enolase, C-terminal TIM barrel domain FDP11_RS10445 PF04977 Septum formation initiator FDP11_RS10450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FDP11_RS10455 PF02542 YgbB family FDP11_RS10460 PF01142 tRNA pseudouridine synthase D (TruD) FDP11_RS10465 PF01975 Survival protein SurE FDP11_RS10475 PF01476 LysM domain FDP11_RS10475 PF01551 Peptidase family M23 FDP11_RS10480 PF00140 Sigma-70 factor, region 1.2 FDP11_RS10480 PF04542 Sigma-70 region 2 FDP11_RS10480 PF04545 Sigma-70, region 4 FDP11_RS10480 PF04539 Sigma-70 region 3 FDP11_RS10485 PF05188 MutS domain II FDP11_RS10485 PF05192 MutS domain III FDP11_RS10485 PF00488 MutS domain V FDP11_RS10485 PF05190 MutS family domain IV FDP11_RS10485 PF01624 MutS domain I FDP11_RS10490 PF02464 Competence-damaged protein FDP11_RS10495 PF00154 recA bacterial DNA recombination protein FDP11_RS10500 PF02631 RecX family FDP11_RS10505 PF02272 DHHA1 domain FDP11_RS10505 PF01411 tRNA synthetases class II (A) FDP11_RS10505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDP11_RS10510 PF00696 Amino acid kinase family FDP11_RS10510 PF01842 ACT domain FDP11_RS10510 PF13840 ACT domain FDP11_RS10515 PF02599 Global regulator protein family FDP11_RS10570 PF04277 Oxaloacetate decarboxylase, gamma chain FDP11_RS10575 PF00364 Biotin-requiring enzyme FDP11_RS10575 PF00682 HMGL-like FDP11_RS10575 PF02436 Conserved carboxylase domain FDP11_RS10580 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FDP11_RS10585 PF00107 Zinc-binding dehydrogenase FDP11_RS10585 PF08240 Alcohol dehydrogenase GroES-like domain FDP11_RS10590 PF09335 SNARE associated Golgi protein FDP11_RS10595 PF00675 Insulinase (Peptidase family M16) FDP11_RS10595 PF05193 Peptidase M16 inactive domain FDP11_RS10600 PF04262 Glutamate-cysteine ligase FDP11_RS10610 PF02664 S-Ribosylhomocysteinase (LuxS) FDP11_RS10615 PF01595 Cyclin M transmembrane N-terminal domain FDP11_RS10615 PF03471 Transporter associated domain FDP11_RS10615 PF00571 CBS domain FDP11_RS10620 PF01578 Cytochrome C assembly protein FDP11_RS10625 PF02881 SRP54-type protein, helical bundle domain FDP11_RS10625 PF00448 SRP54-type protein, GTPase domain FDP11_RS10625 PF02978 Signal peptide binding domain FDP11_RS10630 PF00886 Ribosomal protein S16 FDP11_RS10635 PF05239 PRC-barrel domain FDP11_RS10635 PF01782 RimM N-terminal domain FDP11_RS10640 PF01746 tRNA (Guanine-1)-methyltransferase FDP11_RS10645 PF01245 Ribosomal protein L19 FDP11_RS10650 PF03884 DNA gyrase inhibitor YacG FDP11_RS10655 PF07072 Cell division protein FDP11_RS10660 PF01121 Dephospho-CoA kinase FDP11_RS10665 PF06750 Bacterial Peptidase A24 N-terminal domain FDP11_RS10665 PF01478 Type IV leader peptidase family FDP11_RS10670 PF00482 Type II secretion system (T2SS), protein F FDP11_RS10675 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDP11_RS10675 PF00437 Type II/IV secretion system protein FDP11_RS10680 PF07963 Prokaryotic N-terminal methylation motif FDP11_RS10680 PF00114 Pilin (bacterial filament) FDP11_RS10685 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FDP11_RS10685 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FDP11_RS10690 PF01510 N-acetylmuramoyl-L-alanine amidase FDP11_RS10695 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS10695 PF07729 FCD domain FDP11_RS10700 PF17831 Pyruvate dehydrogenase E1 component middle domain FDP11_RS10700 PF00456 Transketolase, thiamine diphosphate binding domain FDP11_RS10705 PF00364 Biotin-requiring enzyme FDP11_RS10705 PF02817 e3 binding domain FDP11_RS10705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDP11_RS10710 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS10710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDP11_RS10715 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS10720 PF00156 Phosphoribosyl transferase domain FDP11_RS10725 PF00484 Carbonic anhydrase FDP11_RS10730 PF01740 STAS domain FDP11_RS10730 PF00916 Sulfate permease family FDP11_RS10735 PF00005 ABC transporter FDP11_RS10740 PF01061 ABC-2 type transporter FDP11_RS10745 PF03279 Bacterial lipid A biosynthesis acyltransferase FDP11_RS10750 PF02569 Pantoate-beta-alanine ligase FDP11_RS10755 PF02548 Ketopantoate hydroxymethyltransferase FDP11_RS10760 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDP11_RS10765 PF12627 Probable RNA and SrmB- binding site of polymerase A FDP11_RS10765 PF12626 Polymerase A arginine-rich C-terminus FDP11_RS10765 PF01743 Poly A polymerase head domain FDP11_RS10770 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDP11_RS10775 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDP11_RS10780 PF17746 SfsA N-terminal OB domain FDP11_RS10780 PF03749 Sugar fermentation stimulation protein RE domain FDP11_RS10785 PF00271 Helicase conserved C-terminal domain FDP11_RS10785 PF04408 Helicase associated domain (HA2) FDP11_RS10785 PF00270 DEAD/DEAH box helicase FDP11_RS10785 PF08482 ATP-dependent helicase C-terminal FDP11_RS10790 PF00912 Transglycosylase FDP11_RS10790 PF00905 Penicillin binding protein transpeptidase domain FDP11_RS10790 PF14814 Bifunctional transglycosylase second domain FDP11_RS10795 PF01734 Patatin-like phospholipase FDP11_RS10800 PF06434 Aconitate hydratase 2 N-terminus FDP11_RS10800 PF00330 Aconitase family (aconitate hydratase) FDP11_RS10800 PF11791 Aconitate B N-terminal domain FDP11_RS10805 PF06062 Uncharacterised protein family (UPF0231) FDP11_RS10810 PF00543 Nitrogen regulatory protein P-II FDP11_RS10815 PF00909 Ammonium Transporter Family FDP11_RS10820 PF13416 Bacterial extracellular solute-binding protein FDP11_RS10830 PF00005 ABC transporter FDP11_RS10830 PF08402 TOBE domain FDP11_RS10835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDP11_RS10835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDP11_RS10835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDP11_RS10835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDP11_RS10840 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FDP11_RS10840 PF06165 Glycosyltransferase family 36 FDP11_RS10845 PF02838 Glycosyl hydrolase family 20, domain 2 FDP11_RS10845 PF00728 Glycosyl hydrolase family 20, catalytic domain FDP11_RS10850 PF01869 BadF/BadG/BcrA/BcrD ATPase family FDP11_RS10860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS10860 PF00005 ABC transporter FDP11_RS10865 PF00005 ABC transporter FDP11_RS10865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS10870 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS10870 PF12911 N-terminal TM domain of oligopeptide transport permease C FDP11_RS10875 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS10880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS10885 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS10885 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS10885 PF00072 Response regulator receiver domain FDP11_RS10890 PF05175 Methyltransferase small domain FDP11_RS10890 PF08468 Methyltransferase small domain N-terminal FDP11_RS10895 PF01594 AI-2E family transporter FDP11_RS10900 PF00202 Aminotransferase class-III FDP11_RS10905 PF01521 Iron-sulphur cluster biosynthesis FDP11_RS10915 PF00873 AcrB/AcrD/AcrF family FDP11_RS10920 PF01551 Peptidase family M23 FDP11_RS10920 PF08525 Opacity-associated protein A N-terminal motif FDP11_RS10920 PF01476 LysM domain FDP11_RS10925 PF00579 tRNA synthetases class I (W and Y) FDP11_RS10930 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS10930 PF01464 Transglycosylase SLT domain FDP11_RS10935 PF02769 AIR synthase related protein, C-terminal domain FDP11_RS10935 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FDP11_RS10935 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FDP11_RS10960 PF01546 Peptidase family M20/M25/M40 FDP11_RS10960 PF07687 Peptidase dimerisation domain FDP11_RS10965 PF00860 Permease family FDP11_RS10970 PF00156 Phosphoribosyl transferase domain FDP11_RS10980 PF07417 Sigma factor-binding transcriptional regulator Crl FDP11_RS10985 PF00696 Amino acid kinase family FDP11_RS10985 PF01472 PUA domain FDP11_RS10990 PF00171 Aldehyde dehydrogenase family FDP11_RS10995 PF03477 ATP cone domain FDP11_RS11000 PF01872 RibD C-terminal domain FDP11_RS11000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDP11_RS11005 PF00677 Lumazine binding domain FDP11_RS11010 PF00925 GTP cyclohydrolase II FDP11_RS11010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FDP11_RS11015 PF00885 6,7-dimethyl-8-ribityllumazine synthase FDP11_RS11020 PF01029 NusB family FDP11_RS11025 PF02769 AIR synthase related protein, C-terminal domain FDP11_RS11025 PF00586 AIR synthase related protein, N-terminal domain FDP11_RS11030 PF04608 Phosphatidylglycerophosphatase A FDP11_RS11035 PF02779 Transketolase, pyrimidine binding domain FDP11_RS11035 PF02780 Transketolase, C-terminal domain FDP11_RS11035 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FDP11_RS11040 PF00348 Polyprenyl synthetase FDP11_RS11045 PF02609 Exonuclease VII small subunit FDP11_RS11050 PF01618 MotA/TolQ/ExbB proton channel family FDP11_RS11055 PF00691 OmpA family FDP11_RS11060 PF02926 THUMP domain FDP11_RS11060 PF02568 Thiamine biosynthesis protein (ThiI) FDP11_RS11065 PF03466 LysR substrate binding domain FDP11_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS11075 PF04241 Protein of unknown function (DUF423) FDP11_RS11080 PF18125 RlmM ferredoxin-like domain FDP11_RS11080 PF01728 FtsJ-like methyltransferase FDP11_RS11085 PF01223 DNA/RNA non-specific endonuclease FDP11_RS11090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDP11_RS11090 PF01367 5'-3' exonuclease, C-terminal SAM fold FDP11_RS11095 PF11892 Domain of unknown function (DUF3412) FDP11_RS11095 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FDP11_RS11095 PF03641 Possible lysine decarboxylase FDP11_RS11100 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS11100 PF00072 Response regulator receiver domain FDP11_RS11110 PF14489 QueF-like protein FDP11_RS11110 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FDP11_RS11115 PF07348 Syd protein (SUKH-2) FDP11_RS11120 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FDP11_RS11125 PF03180 NLPA lipoprotein FDP11_RS11130 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS11135 PF00005 ABC transporter FDP11_RS11135 PF09383 NIL domain FDP11_RS11145 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS11150 PF00367 phosphotransferase system, EIIB FDP11_RS11150 PF02378 Phosphotransferase system, EIIC FDP11_RS11155 PF00128 Alpha amylase, catalytic domain FDP11_RS11155 PF16657 Maltogenic Amylase, C-terminal domain FDP11_RS11170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FDP11_RS11170 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FDP11_RS11175 PF00464 Serine hydroxymethyltransferase FDP11_RS11180 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FDP11_RS11180 PF04055 Radical SAM superfamily FDP11_RS11185 PF03099 Biotin/lipoate A/B protein ligase family FDP11_RS11190 PF04359 Protein of unknown function (DUF493) FDP11_RS11195 PF00768 D-alanyl-D-alanine carboxypeptidase FDP11_RS11195 PF07943 Penicillin-binding protein 5, C-terminal domain FDP11_RS11200 PF03330 Lytic transglycolase FDP11_RS11200 PF05036 Sporulation related domain FDP11_RS11205 PF01098 Cell cycle protein FDP11_RS11210 PF03717 Penicillin-binding Protein dimerisation domain FDP11_RS11210 PF00905 Penicillin binding protein transpeptidase domain FDP11_RS11215 PF02590 Predicted SPOUT methyltransferase FDP11_RS11225 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FDP11_RS11225 PF06144 DNA polymerase III, delta subunit FDP11_RS11230 PF04390 Lipopolysaccharide-assembly FDP11_RS11235 PF08264 Anticodon-binding domain of tRNA FDP11_RS11235 PF00133 tRNA synthetases class I (I, L, M and V) FDP11_RS11235 PF13603 Leucyl-tRNA synthetase, Domain 2 FDP11_RS11240 PF07295 Zinc-ribbon containing domain FDP11_RS11245 PF00795 Carbon-nitrogen hydrolase FDP11_RS11250 PF00571 CBS domain FDP11_RS11250 PF03471 Transporter associated domain FDP11_RS11255 PF02130 Uncharacterized protein family UPF0054 FDP11_RS11260 PF02562 PhoH-like protein FDP11_RS11265 PF00919 Uncharacterized protein family UPF0004 FDP11_RS11265 PF04055 Radical SAM superfamily FDP11_RS11265 PF01938 TRAM domain FDP11_RS11270 PF01494 FAD binding domain FDP11_RS11385 PF06071 Protein of unknown function (DUF933) FDP11_RS11385 PF01926 50S ribosome-binding GTPase FDP11_RS11390 PF01195 Peptidyl-tRNA hydrolase FDP11_RS11395 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FDP11_RS11395 PF14572 Phosphoribosyl synthetase-associated domain FDP11_RS11400 PF00288 GHMP kinases N terminal domain FDP11_RS11400 PF08544 GHMP kinases C terminal FDP11_RS11405 PF03550 Outer membrane lipoprotein LolB FDP11_RS11410 PF01488 Shikimate / quinate 5-dehydrogenase FDP11_RS11410 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FDP11_RS11410 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FDP11_RS11415 PF00472 RF-1 domain FDP11_RS11415 PF03462 PCRF domain FDP11_RS11420 PF13847 Methyltransferase domain FDP11_RS11420 PF17827 PrmC N-terminal domain FDP11_RS11425 PF04247 Invasion gene expression up-regulator, SirB FDP11_RS11430 PF13369 Transglutaminase-like superfamily FDP11_RS11435 PF00793 DAHP synthetase I family FDP11_RS11440 PF00149 Calcineurin-like phosphoesterase FDP11_RS11440 PF02872 5'-nucleotidase, C-terminal domain FDP11_RS11445 PF04073 Aminoacyl-tRNA editing domain FDP11_RS11450 PF01479 S4 domain FDP11_RS11450 PF00849 RNA pseudouridylate synthase FDP11_RS11455 PF01713 Smr domain FDP11_RS11475 PF00728 Glycosyl hydrolase family 20, catalytic domain FDP11_RS11475 PF02838 Glycosyl hydrolase family 20, domain 2 FDP11_RS11475 PF03173 Putative carbohydrate binding domain FDP11_RS11475 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FDP11_RS11490 PF00403 Heavy-metal-associated domain FDP11_RS11495 PF13609 Gram-negative porin FDP11_RS11500 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDP11_RS11505 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDP11_RS11510 PF01389 OmpA-like transmembrane domain FDP11_RS11510 PF00691 OmpA family FDP11_RS11555 PF00072 Response regulator receiver domain FDP11_RS11555 PF01584 CheW-like domain FDP11_RS11560 PF03705 CheR methyltransferase, all-alpha domain FDP11_RS11560 PF01739 CheR methyltransferase, SAM binding domain FDP11_RS11565 PF00460 Flagella basal body rod protein FDP11_RS11570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS11570 PF00460 Flagella basal body rod protein FDP11_RS11575 PF03963 Flagellar hook capping protein - N-terminal region FDP11_RS11575 PF13860 FlgD Ig-like domain FDP11_RS11575 PF13861 FlgD Tudor-like domain FDP11_RS11580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS11580 PF00460 Flagella basal body rod protein FDP11_RS11580 PF07559 Flagellar basal body protein FlaE FDP11_RS11585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS11585 PF00460 Flagella basal body rod protein FDP11_RS11590 PF00460 Flagella basal body rod protein FDP11_RS11590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS11595 PF02107 Flagellar L-ring protein FDP11_RS11600 PF02119 Flagellar P-ring protein FDP11_RS11605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FDP11_RS11605 PF10135 Rod binding protein FDP11_RS11610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FDP11_RS11610 PF07196 Flagellin hook IN motif FDP11_RS11615 PF00669 Bacterial flagellin N-terminal helical region FDP11_RS11620 PF00669 Bacterial flagellin N-terminal helical region FDP11_RS11620 PF00700 Bacterial flagellin C-terminal helical region FDP11_RS11620 PF07196 Flagellin hook IN motif FDP11_RS11625 PF00700 Bacterial flagellin C-terminal helical region FDP11_RS11625 PF07196 Flagellin hook IN motif FDP11_RS11625 PF00669 Bacterial flagellin N-terminal helical region FDP11_RS11630 PF00669 Bacterial flagellin N-terminal helical region FDP11_RS11630 PF07196 Flagellin hook IN motif FDP11_RS11630 PF00700 Bacterial flagellin C-terminal helical region FDP11_RS11635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FDP11_RS11640 PF05524 PEP-utilising enzyme, N-terminal FDP11_RS11640 PF00391 PEP-utilising enzyme, mobile domain FDP11_RS11640 PF02896 PEP-utilising enzyme, TIM barrel domain FDP11_RS11645 PF00381 PTS HPr component phosphorylation site FDP11_RS11650 PF00291 Pyridoxal-phosphate dependent enzyme FDP11_RS11660 PF04354 ZipA, C-terminal FtsZ-binding domain FDP11_RS11665 PF01653 NAD-dependent DNA ligase adenylation domain FDP11_RS11665 PF03120 NAD-dependent DNA ligase OB-fold domain FDP11_RS11665 PF12826 Helix-hairpin-helix motif FDP11_RS11665 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FDP11_RS11665 PF00533 BRCA1 C Terminus (BRCT) domain FDP11_RS11675 PF03573 outer membrane porin, OprD family FDP11_RS11690 PF16200 C-terminal region of band_7 FDP11_RS11690 PF01145 SPFH domain / Band 7 family FDP11_RS11695 PF11658 Cellulose biosynthesis protein BcsG FDP11_RS11705 PF10995 Cellulose biosynthesis GIL FDP11_RS11715 PF06564 Cellulose biosynthesis protein BcsQ FDP11_RS11720 PF00535 Glycosyl transferase family 2 FDP11_RS11720 PF07238 PilZ domain FDP11_RS11720 PF03552 Cellulose synthase FDP11_RS11725 PF03170 Bacterial cellulose synthase subunit FDP11_RS11730 PF01270 Glycosyl hydrolases family 8 FDP11_RS11735 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FDP11_RS11740 PF00085 Thioredoxin FDP11_RS11745 PF00106 short chain dehydrogenase FDP11_RS11750 PF01370 NAD dependent epimerase/dehydratase family FDP11_RS11750 PF08338 Domain of unknown function (DUF1731) FDP11_RS11755 PF07556 Protein of unknown function (DUF1538) FDP11_RS11760 PF07556 Protein of unknown function (DUF1538) FDP11_RS11775 PF12850 Calcineurin-like phosphoesterase superfamily domain FDP11_RS11790 PF17323 Trans-membrane regulatory protein ToxS FDP11_RS11795 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS11800 PF00183 Hsp90 protein FDP11_RS11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS11805 PF05191 Adenylate kinase, active site lid FDP11_RS11810 PF00762 Ferrochelatase FDP11_RS11815 PF00854 POT family FDP11_RS11820 PF02357 Transcription termination factor nusG FDP11_RS11825 PF13537 Glutamine amidotransferase domain FDP11_RS11825 PF00733 Asparagine synthase FDP11_RS11830 PF00999 Sodium/hydrogen exchanger family FDP11_RS11830 PF02254 TrkA-N domain FDP11_RS11835 PF00480 ROK family FDP11_RS11835 PF01047 MarR family FDP11_RS11840 PF01979 Amidohydrolase family FDP11_RS11845 PF02378 Phosphotransferase system, EIIC FDP11_RS11845 PF00367 phosphotransferase system, EIIB FDP11_RS11850 PF00749 tRNA synthetases class I (E and Q), catalytic domain FDP11_RS11850 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FDP11_RS11855 PF01475 Ferric uptake regulator family FDP11_RS11865 PF00258 Flavodoxin FDP11_RS11875 PF12697 Alpha/beta hydrolase family FDP11_RS11880 PF17206 SeqA protein N-terminal domain FDP11_RS11880 PF03925 SeqA protein C-terminal domain FDP11_RS11885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDP11_RS11885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDP11_RS11885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDP11_RS11885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDP11_RS11895 PF01784 NIF3 (NGG1p interacting factor 3) FDP11_RS11900 PF00285 Citrate synthase, C-terminal domain FDP11_RS11905 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDP11_RS11910 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FDP11_RS11915 PF00890 FAD binding domain FDP11_RS11915 PF02910 Fumarate reductase flavoprotein C-term FDP11_RS11920 PF13085 2Fe-2S iron-sulfur cluster binding domain FDP11_RS11925 PF16870 2-oxoglutarate dehydrogenase C-terminal FDP11_RS11925 PF00676 Dehydrogenase E1 component FDP11_RS11925 PF16078 2-oxoglutarate dehydrogenase N-terminus FDP11_RS11925 PF02779 Transketolase, pyrimidine binding domain FDP11_RS11930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FDP11_RS11930 PF00364 Biotin-requiring enzyme FDP11_RS11930 PF02817 e3 binding domain FDP11_RS11935 PF00549 CoA-ligase FDP11_RS11935 PF08442 ATP-grasp domain FDP11_RS11940 PF00549 CoA-ligase FDP11_RS11940 PF02629 CoA binding domain FDP11_RS11945 PF00551 Formyl transferase FDP11_RS11950 PF00586 AIR synthase related protein, N-terminal domain FDP11_RS11950 PF02769 AIR synthase related protein, C-terminal domain FDP11_RS11960 PF00860 Permease family FDP11_RS11975 PF03358 NADPH-dependent FMN reductase FDP11_RS11980 PF03960 ArsC family FDP11_RS11985 PF01435 Peptidase family M48 FDP11_RS11985 PF13181 Tetratricopeptide repeat FDP11_RS11995 PF01594 AI-2E family transporter FDP11_RS12000 PF00578 AhpC/TSA family FDP11_RS12005 PF01842 ACT domain FDP11_RS12010 PF00701 Dihydrodipicolinate synthetase family FDP11_RS12030 PF07687 Peptidase dimerisation domain FDP11_RS12030 PF01546 Peptidase family M20/M25/M40 FDP11_RS12035 PF03960 ArsC family FDP11_RS12055 PF11143 Protein of unknown function (DUF2919) FDP11_RS12060 PF04261 Dyp-type peroxidase family FDP11_RS12065 PF00700 Bacterial flagellin C-terminal helical region FDP11_RS12065 PF07196 Flagellin hook IN motif FDP11_RS12065 PF00669 Bacterial flagellin N-terminal helical region FDP11_RS12070 PF00669 Bacterial flagellin N-terminal helical region FDP11_RS12070 PF00700 Bacterial flagellin C-terminal helical region FDP11_RS12070 PF07196 Flagellin hook IN motif FDP11_RS12075 PF00669 Bacterial flagellin N-terminal helical region FDP11_RS12075 PF07196 Flagellin hook IN motif FDP11_RS12075 PF00700 Bacterial flagellin C-terminal helical region FDP11_RS12080 PF03646 FlaG protein FDP11_RS12085 PF07195 Flagellar hook-associated protein 2 C-terminus FDP11_RS12085 PF02465 Flagellar hook-associated protein 2 N-terminus FDP11_RS12085 PF07196 Flagellin hook IN motif FDP11_RS12095 PF02561 Flagellar protein FliS FDP11_RS12100 PF02954 Bacterial regulatory protein, Fis family FDP11_RS12100 PF00158 Sigma-54 interaction domain FDP11_RS12100 PF06490 Flagellar regulatory protein FleQ FDP11_RS12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS12105 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS12110 PF02954 Bacterial regulatory protein, Fis family FDP11_RS12110 PF00072 Response regulator receiver domain FDP11_RS12110 PF00158 Sigma-54 interaction domain FDP11_RS12115 PF02049 Flagellar hook-basal body complex protein FliE FDP11_RS12120 PF01514 Secretory protein of YscJ/FliF family FDP11_RS12120 PF08345 Flagellar M-ring protein C-terminal FDP11_RS12125 PF14842 FliG N-terminal domain FDP11_RS12125 PF01706 FliG C-terminal domain FDP11_RS12125 PF14841 FliG middle domain FDP11_RS12135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDP11_RS12135 PF18269 T3SS EscN ATPase C-terminal domain FDP11_RS12155 PF02154 Flagellar motor switch protein FliM FDP11_RS12155 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDP11_RS12160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDP11_RS12165 PF04347 Flagellar biosynthesis protein, FliO FDP11_RS12170 PF00813 FliP family FDP11_RS12175 PF01313 Bacterial export proteins, family 3 FDP11_RS12180 PF01311 Bacterial export proteins, family 1 FDP11_RS12185 PF01312 FlhB HrpN YscU SpaS Family FDP11_RS12190 PF00771 FHIPEP family FDP11_RS12195 PF00448 SRP54-type protein, GTPase domain FDP11_RS12200 PF10609 NUBPL iron-transfer P-loop NTPase FDP11_RS12205 PF04545 Sigma-70, region 4 FDP11_RS12205 PF04542 Sigma-70 region 2 FDP11_RS12205 PF04539 Sigma-70 region 3 FDP11_RS12210 PF00072 Response regulator receiver domain FDP11_RS12215 PF04344 Chemotaxis phosphatase, CheZ FDP11_RS12220 PF02895 Signal transducing histidine kinase, homodimeric domain FDP11_RS12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS12220 PF01627 Hpt domain FDP11_RS12220 PF00072 Response regulator receiver domain FDP11_RS12220 PF01584 CheW-like domain FDP11_RS12225 PF00072 Response regulator receiver domain FDP11_RS12225 PF01339 CheB methylesterase FDP11_RS12230 PF13614 AAA domain FDP11_RS12240 PF01584 CheW-like domain FDP11_RS12250 PF00005 ABC transporter FDP11_RS12255 PF03379 CcmB protein FDP11_RS12260 PF01578 Cytochrome C assembly protein FDP11_RS12265 PF04995 Heme exporter protein D (CcmD) FDP11_RS12270 PF03100 CcmE FDP11_RS12275 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FDP11_RS12275 PF01578 Cytochrome C assembly protein FDP11_RS12280 PF08534 Redoxin FDP11_RS12285 PF03918 Cytochrome C biogenesis protein FDP11_RS12295 PF04333 MlaA lipoprotein FDP11_RS12300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDP11_RS12305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FDP11_RS12315 PF04542 Sigma-70 region 2 FDP11_RS12315 PF08281 Sigma-70, region 4 FDP11_RS12320 PF00108 Thiolase, N-terminal domain FDP11_RS12320 PF02803 Thiolase, C-terminal domain FDP11_RS12325 PF00378 Enoyl-CoA hydratase/isomerase FDP11_RS12325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDP11_RS12325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDP11_RS12335 PF05193 Peptidase M16 inactive domain FDP11_RS12335 PF00675 Insulinase (Peptidase family M16) FDP11_RS12335 PF16187 Middle or third domain of peptidase_M16 FDP11_RS12340 PF00300 Histidine phosphatase superfamily (branch 1) FDP11_RS12345 PF01713 Smr domain FDP11_RS12350 PF05175 Methyltransferase small domain FDP11_RS12355 PF01264 Chorismate synthase FDP11_RS12360 PF03458 UPF0126 domain FDP11_RS12365 PF04315 Elongation factor P hydroxylase FDP11_RS12370 PF08891 YfcL protein FDP11_RS12375 PF03358 NADPH-dependent FMN reductase FDP11_RS12380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FDP11_RS12380 PF01266 FAD dependent oxidoreductase FDP11_RS12385 PF02801 Beta-ketoacyl synthase, C-terminal domain FDP11_RS12385 PF00109 Beta-ketoacyl synthase, N-terminal domain FDP11_RS12390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDP11_RS12390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDP11_RS12390 PF11890 Domain of unknown function (DUF3410) FDP11_RS12395 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDP11_RS12395 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDP11_RS12405 PF01416 tRNA pseudouridine synthase FDP11_RS12410 PF17848 Acetyl-coA carboxylase zinc finger domain FDP11_RS12410 PF01039 Carboxyl transferase domain FDP11_RS12415 PF02875 Mur ligase family, glutamate ligase domain FDP11_RS12415 PF08245 Mur ligase middle domain FDP11_RS12420 PF05036 Sporulation related domain FDP11_RS12425 PF02674 Colicin V production protein FDP11_RS12430 PF00156 Phosphoribosyl transferase domain FDP11_RS12435 PF03466 LysR substrate binding domain FDP11_RS12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS12440 PF00072 Response regulator receiver domain FDP11_RS12445 PF04304 Protein of unknown function (DUF454) FDP11_RS12450 PF00156 Phosphoribosyl transferase domain FDP11_RS12455 PF12169 DNA polymerase III subunits gamma and tau domain III FDP11_RS12455 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FDP11_RS12455 PF12170 DNA polymerase III tau subunit V interacting with alpha FDP11_RS12460 PF02575 YbaB/EbfC DNA-binding family FDP11_RS12465 PF02132 RecR protein FDP11_RS12465 PF13662 Toprim domain FDP11_RS12470 PF00230 Major intrinsic protein FDP11_RS12480 PF01042 Endoribonuclease L-PSP FDP11_RS12485 PF03313 Serine dehydratase alpha chain FDP11_RS12495 PF03692 Putative zinc- or iron-chelating domain FDP11_RS12500 PF04226 Transglycosylase associated protein FDP11_RS12505 PF03692 Putative zinc- or iron-chelating domain FDP11_RS12510 PF00924 Mechanosensitive ion channel FDP11_RS12510 PF05552 Conserved TM helix FDP11_RS12515 PF03992 Antibiotic biosynthesis monooxygenase FDP11_RS12520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS12530 PF00245 Alkaline phosphatase FDP11_RS12545 PF13847 Methyltransferase domain FDP11_RS12550 PF02743 Cache domain FDP11_RS12550 PF00672 HAMP domain FDP11_RS12550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS12555 PF01263 Aldose 1-epimerase FDP11_RS12560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FDP11_RS12560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FDP11_RS12565 PF01641 SelR domain FDP11_RS12575 PF07023 Protein of unknown function (DUF1315) FDP11_RS12580 PF00710 Asparaginase, N-terminal FDP11_RS12580 PF17763 Glutaminase/Asparaginase C-terminal domain FDP11_RS12585 PF01343 Peptidase family S49 FDP11_RS12590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FDP11_RS12590 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS12595 PF00881 Nitroreductase family FDP11_RS12600 PF01751 Toprim domain FDP11_RS12600 PF01131 DNA topoisomerase FDP11_RS12610 PF00106 short chain dehydrogenase FDP11_RS12615 PF00850 Histone deacetylase domain FDP11_RS12625 PF00884 Sulfatase FDP11_RS12625 PF11893 Domain of unknown function (DUF3413) FDP11_RS12630 PF07208 Protein of unknown function (DUF1414) FDP11_RS12635 PF04245 37-kD nucleoid-associated bacterial protein FDP11_RS12650 PF03553 Na+/H+ antiporter family FDP11_RS12655 PF01118 Semialdehyde dehydrogenase, NAD binding domain FDP11_RS12655 PF02774 Semialdehyde dehydrogenase, dimerisation domain FDP11_RS12660 PF00520 Ion transport protein FDP11_RS12660 PF00027 Cyclic nucleotide-binding domain FDP11_RS12665 PF01914 MarC family integral membrane protein FDP11_RS12670 PF00465 Iron-containing alcohol dehydrogenase FDP11_RS12670 PF00171 Aldehyde dehydrogenase family FDP11_RS12685 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FDP11_RS12685 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FDP11_RS12690 PF00462 Glutaredoxin FDP11_RS12700 PF13726 Na+-H+ antiporter family FDP11_RS12700 PF03553 Na+/H+ antiporter family FDP11_RS12705 PF00929 Exonuclease FDP11_RS12710 PF18393 MotY N-terminal domain FDP11_RS12710 PF00691 OmpA family FDP11_RS12715 PF10952 Protein of unknown function (DUF2753) FDP11_RS12720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS12725 PF00730 HhH-GPD superfamily base excision DNA repair protein FDP11_RS12725 PF00633 Helix-hairpin-helix motif FDP11_RS12725 PF10576 Iron-sulfur binding domain of endonuclease III FDP11_RS12730 PF02508 Rnf-Nqr subunit, membrane protein FDP11_RS12735 PF04205 FMN-binding domain FDP11_RS12740 PF03116 NQR2, RnfD, RnfE family FDP11_RS12745 PF10531 SLBB domain FDP11_RS12745 PF13375 RnfC Barrel sandwich hybrid domain FDP11_RS12745 PF12838 4Fe-4S dicluster domain FDP11_RS12745 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FDP11_RS12750 PF04060 Putative Fe-S cluster FDP11_RS12755 PF02508 Rnf-Nqr subunit, membrane protein FDP11_RS12770 PF03372 Endonuclease/Exonuclease/phosphatase family FDP11_RS12775 PF10689 Protein of unknown function (DUF2496) FDP11_RS12780 PF07445 Primosomal replication protein priC FDP11_RS12785 PF01925 Sulfite exporter TauE/SafE FDP11_RS12790 PF13307 Helicase C-terminal domain FDP11_RS12790 PF06733 DEAD_2 FDP11_RS12800 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FDP11_RS12805 PF00849 RNA pseudouridylate synthase FDP11_RS12810 PF03971 Monomeric isocitrate dehydrogenase FDP11_RS12815 PF00313 'Cold-shock' DNA-binding domain FDP11_RS12820 PF02617 ATP-dependent Clp protease adaptor protein ClpS FDP11_RS12825 PF17871 AAA lid domain FDP11_RS12825 PF10431 C-terminal, D2-small domain, of ClpB protein FDP11_RS12825 PF02861 Clp amino terminal domain, pathogenicity island component FDP11_RS12825 PF07724 AAA domain (Cdc48 subfamily) FDP11_RS12825 PF00004 ATPase family associated with various cellular activities (AAA) FDP11_RS12835 PF01176 Translation initiation factor 1A / IF-1 FDP11_RS12840 PF04377 Arginine-tRNA-protein transferase, C terminus FDP11_RS12840 PF04376 Arginine-tRNA-protein transferase, N terminus FDP11_RS12845 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FDP11_RS12855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FDP11_RS12860 PF10692 Protein of unknown function (DUF2498) FDP11_RS12865 PF01751 Toprim domain FDP11_RS12865 PF01396 Topoisomerase DNA binding C4 zinc finger FDP11_RS12865 PF01131 DNA topoisomerase FDP11_RS12865 PF08272 Topoisomerase I zinc-ribbon-like FDP11_RS12870 PF00483 Nucleotidyl transferase FDP11_RS12875 PF00534 Glycosyl transferases group 1 FDP11_RS12875 PF08323 Starch synthase catalytic domain FDP11_RS12895 PF04993 TfoX N-terminal domain FDP11_RS12895 PF04994 TfoX C-terminal domain FDP11_RS12900 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS12905 PF02613 Nitrate reductase delta subunit FDP11_RS12910 PF00072 Response regulator receiver domain FDP11_RS12910 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS12915 PF02698 DUF218 domain FDP11_RS12920 PF13847 Methyltransferase domain FDP11_RS12925 PF17193 MukF C-terminal domain FDP11_RS12925 PF17192 MukF middle domain FDP11_RS12925 PF03882 MukF winged-helix domain FDP11_RS12930 PF04288 MukE-like family FDP11_RS12935 PF16330 MukB hinge domain FDP11_RS12935 PF04310 MukB N-terminal FDP11_RS12945 PF08443 RimK-like ATP-grasp domain FDP11_RS12945 PF18030 RimK PreATP-grasp domain FDP11_RS12955 PF08443 RimK-like ATP-grasp domain FDP11_RS12955 PF18030 RimK PreATP-grasp domain FDP11_RS12960 PF08003 Protein of unknown function (DUF1698) FDP11_RS12965 PF13649 Methyltransferase domain FDP11_RS12970 PF01904 Protein of unknown function DUF72 FDP11_RS12975 PF01336 OB-fold nucleic acid binding domain FDP11_RS12975 PF00152 tRNA synthetases class II (D, K and N) FDP11_RS12975 PF02938 GAD domain FDP11_RS12980 PF02075 Crossover junction endodeoxyribonuclease RuvC FDP11_RS12985 PF00672 HAMP domain FDP11_RS12985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS12985 PF02203 Tar ligand binding domain homologue FDP11_RS12990 PF01330 RuvA N terminal domain FDP11_RS12990 PF07499 RuvA, C-terminal domain FDP11_RS12995 PF05491 RuvB C-terminal winged helix domain FDP11_RS12995 PF17864 RuvB AAA lid domain FDP11_RS12995 PF05496 Holliday junction DNA helicase RuvB P-loop domain FDP11_RS13000 PF01654 Cytochrome bd terminal oxidase subunit I FDP11_RS13005 PF02322 Cytochrome bd terminal oxidase subunit II FDP11_RS13010 PF08173 Membrane bound YbgT-like protein FDP11_RS13020 PF03061 Thioesterase superfamily FDP11_RS13025 PF01618 MotA/TolQ/ExbB proton channel family FDP11_RS13030 PF02472 Biopolymer transport protein ExbD/TolR FDP11_RS13040 PF04052 TolB amino-terminal domain FDP11_RS13040 PF07676 WD40-like Beta Propeller Repeat FDP11_RS13045 PF00691 OmpA family FDP11_RS13050 PF16331 TolA binding protein trimerisation FDP11_RS13050 PF13174 Tetratricopeptide repeat FDP11_RS13055 PF01207 Dihydrouridine synthase (Dus) FDP11_RS13060 PF07516 SecA Wing and Scaffold domain FDP11_RS13060 PF01043 SecA preprotein cross-linking domain FDP11_RS13060 PF02810 SEC-C motif FDP11_RS13060 PF07517 SecA DEAD-like domain FDP11_RS13065 PF02600 Disulfide bond formation protein DsbB FDP11_RS13070 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FDP11_RS13075 PF07840 FadR C-terminal domain FDP11_RS13075 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS13085 PF01588 Putative tRNA binding domain FDP11_RS13085 PF09334 tRNA synthetases class I (M) FDP11_RS13090 PF10609 NUBPL iron-transfer P-loop NTPase FDP11_RS13095 PF00485 Phosphoribulokinase / Uridine kinase family FDP11_RS13105 PF12557 Cob(I)alamin adenosyltransferase N terminal FDP11_RS13105 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FDP11_RS13110 PF01451 Low molecular weight phosphotyrosine protein phosphatase FDP11_RS13115 PF00916 Sulfate permease family FDP11_RS13115 PF01740 STAS domain FDP11_RS13120 PF12111 Polyribonucleotide phosphorylase C terminal FDP11_RS13120 PF00575 S1 RNA binding domain FDP11_RS13120 PF10150 Ribonuclease E/G family FDP11_RS13125 PF01479 S4 domain FDP11_RS13125 PF00849 RNA pseudouridylate synthase FDP11_RS13130 PF02545 Maf-like protein FDP11_RS13135 PF02620 Large ribosomal RNA subunit accumulation protein YceD FDP11_RS13140 PF01783 Ribosomal L32p protein family FDP11_RS13145 PF02504 Fatty acid synthesis protein FDP11_RS13150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FDP11_RS13150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FDP11_RS13155 PF00698 Acyl transferase domain FDP11_RS13165 PF00550 Phosphopantetheine attachment site FDP11_RS13170 PF00109 Beta-ketoacyl synthase, N-terminal domain FDP11_RS13170 PF02801 Beta-ketoacyl synthase, C-terminal domain FDP11_RS13175 PF01063 Amino-transferase class IV FDP11_RS13180 PF02618 YceG-like family FDP11_RS13185 PF02223 Thymidylate kinase FDP11_RS13190 PF09115 DNA polymerase III, delta subunit, C terminal FDP11_RS13195 PF01026 TatD related DNase FDP11_RS13200 PF02378 Phosphotransferase system, EIIC FDP11_RS13200 PF00367 phosphotransferase system, EIIB FDP11_RS13215 PF00209 Sodium:neurotransmitter symporter family FDP11_RS13230 PF01734 Patatin-like phospholipase FDP11_RS13235 PF00224 Pyruvate kinase, barrel domain FDP11_RS13235 PF02887 Pyruvate kinase, alpha/beta domain FDP11_RS13240 PF00480 ROK family FDP11_RS13245 PF01584 CheW-like domain FDP11_RS13245 PF00072 Response regulator receiver domain FDP11_RS13250 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDP11_RS13250 PF02811 PHP domain FDP11_RS13250 PF14579 Helix-hairpin-helix motif FDP11_RS13250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDP11_RS13250 PF01336 OB-fold nucleic acid binding domain FDP11_RS13265 PF00106 short chain dehydrogenase FDP11_RS13270 PF08496 Peptidase family S49 N-terminal FDP11_RS13270 PF01343 Peptidase family S49 FDP11_RS13275 PF02224 Cytidylate kinase FDP11_RS13280 PF00575 S1 RNA binding domain FDP11_RS13285 PF00216 Bacterial DNA-binding protein FDP11_RS13290 PF06305 Lipopolysaccharide assembly protein A domain FDP11_RS13295 PF18073 Rubredoxin metal binding domain FDP11_RS13300 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FDP11_RS13305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS13310 PF01370 NAD dependent epimerase/dehydratase family FDP11_RS13315 PF00535 Glycosyl transferase family 2 FDP11_RS13325 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FDP11_RS13335 PF02470 MlaD protein FDP11_RS13340 PF04403 Paraquat-inducible protein A FDP11_RS13345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDP11_RS13350 PF00034 Cytochrome c FDP11_RS13360 PF03916 Polysulphide reductase, NrfD FDP11_RS13365 PF13247 4Fe-4S dicluster domain FDP11_RS13370 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS13370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS13375 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS13375 PF00072 Response regulator receiver domain FDP11_RS13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS13380 PF03466 LysR substrate binding domain FDP11_RS13390 PF11412 Disulphide bond corrector protein DsbC FDP11_RS13390 PF02683 Cytochrome C biogenesis protein transmembrane region FDP11_RS13395 PF00085 Thioredoxin FDP11_RS13410 PF01938 TRAM domain FDP11_RS13410 PF05958 tRNA (Uracil-5-)-methyltransferase FDP11_RS13425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS13435 PF12704 MacB-like periplasmic core domain FDP11_RS13435 PF00005 ABC transporter FDP11_RS13435 PF02687 FtsX-like permease family FDP11_RS13440 PF02687 FtsX-like permease family FDP11_RS13440 PF00005 ABC transporter FDP11_RS13440 PF12704 MacB-like periplasmic core domain FDP11_RS13445 PF00005 ABC transporter FDP11_RS13445 PF02687 FtsX-like permease family FDP11_RS13445 PF12704 MacB-like periplasmic core domain FDP11_RS13450 PF00857 Isochorismatase family FDP11_RS13455 PF02311 AraC-like ligand binding domain FDP11_RS13455 PF12833 Helix-turn-helix domain FDP11_RS13465 PF08267 Cobalamin-independent synthase, N-terminal domain FDP11_RS13465 PF01717 Cobalamin-independent synthase, Catalytic domain FDP11_RS13470 PF02698 DUF218 domain FDP11_RS13495 PF01226 Formate/nitrite transporter FDP11_RS13505 PF03649 Uncharacterised protein family (UPF0014) FDP11_RS13510 PF06796 Periplasmic nitrate reductase protein NapE FDP11_RS13515 PF03264 NapC/NirT cytochrome c family, N-terminal region FDP11_RS13520 PF01568 Molydopterin dinucleotide binding domain FDP11_RS13520 PF18364 Molybdopterin oxidoreductase N-terminal domain FDP11_RS13520 PF00384 Molybdopterin oxidoreductase FDP11_RS13525 PF16875 Glycosyl hydrolase family 36 N-terminal domain FDP11_RS13525 PF16874 Glycosyl hydrolase family 36 C-terminal domain FDP11_RS13535 PF02833 DHHA2 domain FDP11_RS13535 PF01368 DHH family FDP11_RS13545 PF00005 ABC transporter FDP11_RS13550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS13550 PF00005 ABC transporter FDP11_RS13555 PF12911 N-terminal TM domain of oligopeptide transport permease C FDP11_RS13555 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS13560 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS13565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS13570 PF00158 Sigma-54 interaction domain FDP11_RS13570 PF02954 Bacterial regulatory protein, Fis family FDP11_RS13575 PF04012 PspA/IM30 family FDP11_RS13580 PF06667 Phage shock protein B FDP11_RS13585 PF04024 PspC domain FDP11_RS13590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS13600 PF00873 AcrB/AcrD/AcrF family FDP11_RS13605 PF03352 Methyladenine glycosylase FDP11_RS13610 PF03280 Proteobacterial lipase chaperone protein FDP11_RS13615 PF00561 alpha/beta hydrolase fold FDP11_RS13620 PF01053 Cys/Met metabolism PLP-dependent enzyme FDP11_RS13625 PF13396 Phospholipase_D-nuclease N-terminal FDP11_RS13625 PF13091 PLD-like domain FDP11_RS13630 PF00209 Sodium:neurotransmitter symporter family FDP11_RS13635 PF00672 HAMP domain FDP11_RS13635 PF12729 Four helix bundle sensory module for signal transduction FDP11_RS13635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS13640 PF00849 RNA pseudouridylate synthase FDP11_RS13650 PF00175 Oxidoreductase NAD-binding domain FDP11_RS13650 PF00970 Oxidoreductase FAD-binding domain FDP11_RS13650 PF00111 2Fe-2S iron-sulfur cluster binding domain FDP11_RS13655 PF03063 Prismane/CO dehydrogenase family FDP11_RS13660 PF00158 Sigma-54 interaction domain FDP11_RS13660 PF01590 GAF domain FDP11_RS13670 PF01066 CDP-alcohol phosphatidyltransferase FDP11_RS13675 PF00005 ABC transporter FDP11_RS13680 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS13685 PF13416 Bacterial extracellular solute-binding protein FDP11_RS13690 PF09335 SNARE associated Golgi protein FDP11_RS13700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDP11_RS13700 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS13710 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS13715 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS13715 PF00072 Response regulator receiver domain FDP11_RS13725 PF06945 Protein of unknown function (DUF1289) FDP11_RS13735 PF00149 Calcineurin-like phosphoesterase FDP11_RS13735 PF02872 5'-nucleotidase, C-terminal domain FDP11_RS13750 PF01386 Ribosomal L25p family FDP11_RS13755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS13755 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS13755 PF00672 HAMP domain FDP11_RS13760 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS13760 PF00072 Response regulator receiver domain FDP11_RS13770 PF04851 Type III restriction enzyme, res subunit FDP11_RS13770 PF00271 Helicase conserved C-terminal domain FDP11_RS13775 PF01479 S4 domain FDP11_RS13775 PF00849 RNA pseudouridylate synthase FDP11_RS13780 PF07690 Major Facilitator Superfamily FDP11_RS13795 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FDP11_RS13810 PF03264 NapC/NirT cytochrome c family, N-terminal region FDP11_RS13815 PF11066 Protein of unknown function (DUF2867) FDP11_RS13815 PF13460 NAD(P)H-binding FDP11_RS13820 PF01554 MatE FDP11_RS13825 PF00005 ABC transporter FDP11_RS13840 PF06965 Na+/H+ antiporter 1 FDP11_RS13845 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS13845 PF16295 Tetracyclin repressor-like, C-terminal domain FDP11_RS13850 PF02770 Acyl-CoA dehydrogenase, middle domain FDP11_RS13850 PF09317 Domain of unknown function (DUF1974) FDP11_RS13850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDP11_RS13850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDP11_RS13855 PF07055 Enoyl reductase FAD binding domain FDP11_RS13855 PF12241 Trans-2-enoyl-CoA reductase catalytic region FDP11_RS13855 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FDP11_RS13860 PF02080 TrkA-C domain FDP11_RS13860 PF06826 Predicted Permease Membrane Region FDP11_RS13865 PF00462 Glutaredoxin FDP11_RS13870 PF00465 Iron-containing alcohol dehydrogenase FDP11_RS13875 PF01418 Helix-turn-helix domain, rpiR family FDP11_RS13875 PF01380 SIS domain FDP11_RS13880 PF00282 Pyridoxal-dependent decarboxylase conserved domain FDP11_RS13890 PF03956 Lysine exporter LysO FDP11_RS13900 PF04993 TfoX N-terminal domain FDP11_RS13900 PF04994 TfoX C-terminal domain FDP11_RS13915 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS13915 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS13915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS13925 PF00266 Aminotransferase class-V FDP11_RS13930 PF00291 Pyridoxal-phosphate dependent enzyme FDP11_RS13935 PF00664 ABC transporter transmembrane region FDP11_RS13935 PF00005 ABC transporter FDP11_RS13940 PF00664 ABC transporter transmembrane region FDP11_RS13940 PF00005 ABC transporter FDP11_RS13945 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS13955 PF00266 Aminotransferase class-V FDP11_RS13965 PF00072 Response regulator receiver domain FDP11_RS13965 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS13970 PF00939 Sodium:sulfate symporter transmembrane region FDP11_RS13975 PF02698 DUF218 domain FDP11_RS13980 PF00390 Malic enzyme, N-terminal domain FDP11_RS13980 PF03949 Malic enzyme, NAD binding domain FDP11_RS13985 PF11898 Domain of unknown function (DUF3418) FDP11_RS13985 PF00270 DEAD/DEAH box helicase FDP11_RS13985 PF04408 Helicase associated domain (HA2) FDP11_RS13985 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FDP11_RS13985 PF00271 Helicase conserved C-terminal domain FDP11_RS13990 PF02253 Phospholipase A1 FDP11_RS14000 PF09423 PhoD-like phosphatase FDP11_RS14000 PF16655 PhoD-like phosphatase, N-terminal domain FDP11_RS14005 PF01259 SAICAR synthetase FDP11_RS14025 PF05736 OprF membrane domain FDP11_RS14025 PF00691 OmpA family FDP11_RS14040 PF02913 FAD linked oxidases, C-terminal domain FDP11_RS14040 PF13183 4Fe-4S dicluster domain FDP11_RS14040 PF01565 FAD binding domain FDP11_RS14045 PF04191 Phospholipid methyltransferase FDP11_RS14055 PF00221 Aromatic amino acid lyase FDP11_RS14060 PF17391 Urocanase N-terminal domain FDP11_RS14060 PF17392 Urocanase C-terminal domain FDP11_RS14060 PF01175 Urocanase Rossmann-like domain FDP11_RS14065 PF00491 Arginase family FDP11_RS14070 PF01979 Amidohydrolase family FDP11_RS14075 PF07702 UTRA domain FDP11_RS14075 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS14090 PF02824 TGS domain FDP11_RS14090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDP11_RS14090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDP11_RS14090 PF03129 Anticodon binding domain FDP11_RS14095 PF05198 Translation initiation factor IF-3, N-terminal domain FDP11_RS14095 PF00707 Translation initiation factor IF-3, C-terminal domain FDP11_RS14100 PF01632 Ribosomal protein L35 FDP11_RS14105 PF00453 Ribosomal protein L20 FDP11_RS14110 PF01906 Putative heavy-metal-binding FDP11_RS14140 PF17158 Membrane-associated sensor, integral membrane domain FDP11_RS14140 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS14145 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FDP11_RS14145 PF01409 tRNA synthetases class II core domain (F) FDP11_RS14150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FDP11_RS14150 PF03483 B3/4 domain FDP11_RS14150 PF03484 tRNA synthetase B5 domain FDP11_RS14150 PF03147 Ferredoxin-fold anticodon binding domain FDP11_RS14150 PF01588 Putative tRNA binding domain FDP11_RS14160 PF00216 Bacterial DNA-binding protein FDP11_RS14170 PF05724 Thiopurine S-methyltransferase (TPMT) FDP11_RS14175 PF02222 ATP-grasp domain FDP11_RS14180 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FDP11_RS14180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDP11_RS14185 PF04172 LrgB-like family FDP11_RS14190 PF03788 LrgA family FDP11_RS14195 PF08411 Exonuclease C-terminal FDP11_RS14195 PF00929 Exonuclease FDP11_RS14205 PF13460 NAD(P)H-binding FDP11_RS14210 PF02277 Phosphoribosyltransferase FDP11_RS14215 PF02654 Cobalamin-5-phosphate synthase FDP11_RS14220 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FDP11_RS14235 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FDP11_RS14240 PF01032 FecCD transport family FDP11_RS14245 PF00005 ABC transporter FDP11_RS14265 PF03466 LysR substrate binding domain FDP11_RS14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS14275 PF01863 Protein of unknown function DUF45 FDP11_RS14280 PF05971 RNA methyltransferase FDP11_RS14300 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS14305 PF00171 Aldehyde dehydrogenase family FDP11_RS14310 PF05544 Proline racemase FDP11_RS14325 PF02423 Ornithine cyclodeaminase/mu-crystallin family FDP11_RS14330 PF00701 Dihydrodipicolinate synthetase family FDP11_RS14335 PF08402 TOBE domain FDP11_RS14335 PF00005 ABC transporter FDP11_RS14340 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS14345 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS14355 PF08453 Peptidase family M9 N-terminal FDP11_RS14355 PF01752 Collagenase FDP11_RS14365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS14365 PF00005 ABC transporter FDP11_RS14370 PF00005 ABC transporter FDP11_RS14370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS14375 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS14375 PF12911 N-terminal TM domain of oligopeptide transport permease C FDP11_RS14380 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS14385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS14390 PF07687 Peptidase dimerisation domain FDP11_RS14390 PF01546 Peptidase family M20/M25/M40 FDP11_RS14395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS14400 PF04209 homogentisate 1,2-dioxygenase FDP11_RS14410 PF02798 Glutathione S-transferase, N-terminal domain FDP11_RS14410 PF14497 Glutathione S-transferase, C-terminal domain FDP11_RS14460 PF01381 Helix-turn-helix FDP11_RS14460 PF00717 Peptidase S24-like FDP11_RS14515 PF00313 'Cold-shock' DNA-binding domain FDP11_RS14520 PF00773 RNB domain FDP11_RS14520 PF00575 S1 RNA binding domain FDP11_RS14520 PF17876 Cold shock domain FDP11_RS14520 PF08206 Ribonuclease B OB domain FDP11_RS14520 PF08461 Ribonuclease R winged-helix domain FDP11_RS14550 PF07411 Domain of unknown function (DUF1508) FDP11_RS14565 PF02195 ParB-like nuclease domain FDP11_RS14575 PF17288 Terminase RNAseH like domain FDP11_RS14575 PF04466 Phage terminase large subunit FDP11_RS14725 PF01810 LysE type translocator FDP11_RS14755 PF01810 LysE type translocator FDP11_RS14780 PF03553 Na+/H+ antiporter family FDP11_RS14785 PF00120 Glutamine synthetase, catalytic domain FDP11_RS14790 PF07722 Peptidase C26 FDP11_RS14795 PF07883 Cupin domain FDP11_RS14795 PF01381 Helix-turn-helix FDP11_RS14800 PF00171 Aldehyde dehydrogenase family FDP11_RS14805 PF01266 FAD dependent oxidoreductase FDP11_RS14810 PF00795 Carbon-nitrogen hydrolase FDP11_RS14815 PF04371 Porphyromonas-type peptidyl-arginine deiminase FDP11_RS14820 PF00171 Aldehyde dehydrogenase family FDP11_RS14825 PF00202 Aminotransferase class-III FDP11_RS14830 PF01368 DHH family FDP11_RS14830 PF02833 DHHA2 domain FDP11_RS14835 PF00563 EAL domain FDP11_RS14835 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS14845 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FDP11_RS14845 PF01411 tRNA synthetases class II (A) FDP11_RS14845 PF02272 DHHA1 domain FDP11_RS14850 PF12833 Helix-turn-helix domain FDP11_RS14860 PF01047 MarR family FDP11_RS14865 PF04237 YjbR FDP11_RS14875 PF01928 CYTH domain FDP11_RS14885 PF12464 Maltose acetyltransferase FDP11_RS14885 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS14900 PF00672 HAMP domain FDP11_RS14900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FDP11_RS14900 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS14900 PF01627 Hpt domain FDP11_RS14900 PF00072 Response regulator receiver domain FDP11_RS14905 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS14905 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS14905 PF00563 EAL domain FDP11_RS14920 PF04204 Homoserine O-succinyltransferase FDP11_RS14930 PF13520 Amino acid permease FDP11_RS14935 PF03279 Bacterial lipid A biosynthesis acyltransferase FDP11_RS14940 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FDP11_RS14945 PF01810 LysE type translocator FDP11_RS14955 PF01235 Sodium:alanine symporter family FDP11_RS14980 PF00884 Sulfatase FDP11_RS14985 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS14985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS14985 PF08521 Two-component sensor kinase N-terminal FDP11_RS14990 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS14990 PF00072 Response regulator receiver domain FDP11_RS15010 PF00501 AMP-binding enzyme FDP11_RS15020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FDP11_RS15025 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS15030 PF00005 ABC transporter FDP11_RS15030 PF00571 CBS domain FDP11_RS15045 PF02028 BCCT, betaine/carnitine/choline family transporter FDP11_RS15050 PF00583 Acetyltransferase (GNAT) family FDP11_RS15055 PF00202 Aminotransferase class-III FDP11_RS15060 PF06339 Ectoine synthase FDP11_RS15065 PF00696 Amino acid kinase family FDP11_RS15065 PF13840 ACT domain FDP11_RS15085 PF03150 Di-haem cytochrome c peroxidase FDP11_RS15085 PF00034 Cytochrome c FDP11_RS15100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS15115 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FDP11_RS15115 PF17203 Single cache domain 3 FDP11_RS15115 PF00989 PAS fold FDP11_RS15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS15120 PF12431 Transcriptional regulator FDP11_RS15120 PF00072 Response regulator receiver domain FDP11_RS15125 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FDP11_RS15125 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FDP11_RS15130 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FDP11_RS15135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FDP11_RS15135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FDP11_RS15165 PF00158 Sigma-54 interaction domain FDP11_RS15165 PF02954 Bacterial regulatory protein, Fis family FDP11_RS15165 PF01590 GAF domain FDP11_RS15170 PF00171 Aldehyde dehydrogenase family FDP11_RS15190 PF12833 Helix-turn-helix domain FDP11_RS15205 PF00263 Bacterial type II and III secretion system protein FDP11_RS15205 PF03958 Bacterial type II/III secretion system short domain FDP11_RS15210 PF16693 Inner membrane component of T3SS, periplasmic domain FDP11_RS15210 PF16697 Inner membrane component of T3SS, cytoplasmic domain FDP11_RS15220 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FDP11_RS15225 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) FDP11_RS15235 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI FDP11_RS15240 PF01514 Secretory protein of YscJ/FliF family FDP11_RS15250 PF02108 Flagellar assembly protein FliH FDP11_RS15260 PF02661 Fic/DOC family FDP11_RS15290 PF12146 Serine aminopeptidase, S33 FDP11_RS15295 PF12146 Serine aminopeptidase, S33 FDP11_RS15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS15300 PF03466 LysR substrate binding domain FDP11_RS15305 PF01312 FlhB HrpN YscU SpaS Family FDP11_RS15310 PF01311 Bacterial export proteins, family 1 FDP11_RS15315 PF01313 Bacterial export proteins, family 3 FDP11_RS15320 PF00813 FliP family FDP11_RS15325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FDP11_RS15340 PF18269 T3SS EscN ATPase C-terminal domain FDP11_RS15340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDP11_RS15340 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDP11_RS15345 PF07201 HrpJ-like domain FDP11_RS15350 PF09059 TyeA FDP11_RS15370 PF00771 FHIPEP family FDP11_RS15375 PF09621 Type III secretion system regulator (LcrR) FDP11_RS15380 PF07216 LcrG protein FDP11_RS15385 PF04792 V antigen (LcrV) protein FDP11_RS15390 PF07720 Tetratricopeptide repeat FDP11_RS15400 PF05844 YopD protein FDP11_RS15410 PF01925 Sulfite exporter TauE/SafE FDP11_RS15415 PF01970 Tripartite tricarboxylate transporter TctA family FDP11_RS15445 PF00285 Citrate synthase, C-terminal domain FDP11_RS15450 PF00694 Aconitase C-terminal domain FDP11_RS15450 PF00330 Aconitase family (aconitate hydratase) FDP11_RS15455 PF04303 PrpF protein FDP11_RS15460 PF16177 Acetyl-coenzyme A synthetase N-terminus FDP11_RS15460 PF13193 AMP-binding enzyme C-terminal domain FDP11_RS15460 PF00501 AMP-binding enzyme FDP11_RS15465 PF00583 Acetyltransferase (GNAT) family FDP11_RS15470 PF00089 Trypsin FDP11_RS15485 PF04055 Radical SAM superfamily FDP11_RS15490 PF06508 Queuosine biosynthesis protein QueC FDP11_RS15495 PF17158 Membrane-associated sensor, integral membrane domain FDP11_RS15495 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS15505 PF00691 OmpA family FDP11_RS15505 PF05736 OprF membrane domain FDP11_RS15520 PF00691 OmpA family FDP11_RS15520 PF05736 OprF membrane domain FDP11_RS15535 PF17785 PUA-like domain FDP11_RS15535 PF10672 S-adenosylmethionine-dependent methyltransferase FDP11_RS15540 PF00672 HAMP domain FDP11_RS15540 PF02743 Cache domain FDP11_RS15540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS15545 PF00708 Acylphosphatase FDP11_RS15550 PF04358 DsrC like protein FDP11_RS15560 PF01027 Inhibitor of apoptosis-promoting Bax1 FDP11_RS15565 PF00005 ABC transporter FDP11_RS15570 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS15575 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS15580 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS15585 PF10414 Sirohaem synthase dimerisation region FDP11_RS15585 PF14824 Sirohaem biosynthesis protein central FDP11_RS15585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDP11_RS15590 PF04461 Protein of unknown function (DUF520) FDP11_RS15595 PF00793 DAHP synthetase I family FDP11_RS15615 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FDP11_RS15615 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FDP11_RS15615 PF01189 16S rRNA methyltransferase RsmB/F FDP11_RS15620 PF02470 MlaD protein FDP11_RS15625 PF04403 Paraquat-inducible protein A FDP11_RS15630 PF00664 ABC transporter transmembrane region FDP11_RS15630 PF00005 ABC transporter FDP11_RS15635 PF13185 GAF domain FDP11_RS15640 PF17516 ProQ C-terminal domain FDP11_RS15640 PF04352 ProQ/FINO family FDP11_RS15645 PF00595 PDZ domain FDP11_RS15645 PF03572 Peptidase family S41 FDP11_RS15645 PF17804 Tail specific protease N-terminal domain FDP11_RS15645 PF11818 C-terminal domain of tail specific protease (DUF3340) FDP11_RS15655 PF11940 Domain of unknown function (DUF3458) Ig-like fold FDP11_RS15655 PF01433 Peptidase family M1 domain FDP11_RS15655 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FDP11_RS15665 PF05088 Bacterial NAD-glutamate dehydrogenase FDP11_RS15670 PF01180 Dihydroorotate dehydrogenase FDP11_RS15675 PF07126 Cell-division protein ZapC FDP11_RS15680 PF01170 Putative RNA methylase family UPF0020 FDP11_RS15680 PF10672 S-adenosylmethionine-dependent methyltransferase FDP11_RS15680 PF02926 THUMP domain FDP11_RS15700 PF04957 Ribosome modulation factor FDP11_RS15705 PF07977 FabA-like domain FDP11_RS15710 PF13654 AAA domain FDP11_RS15710 PF05362 Lon protease (S16) C-terminal proteolytic domain FDP11_RS15715 PF06303 MatP N-terminal domain FDP11_RS15715 PF17414 MatP C-terminal ribbon-helix-helix domain FDP11_RS15765 PF00072 Response regulator receiver domain FDP11_RS15765 PF09308 LuxQ, periplasmic FDP11_RS15765 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS15780 PF00115 Cytochrome C and Quinol oxidase polypeptide I FDP11_RS15795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDP11_RS15795 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FDP11_RS15805 PF00403 Heavy-metal-associated domain FDP11_RS15820 PF00027 Cyclic nucleotide-binding domain FDP11_RS15820 PF13545 Crp-like helix-turn-helix domain FDP11_RS15825 PF00582 Universal stress protein family FDP11_RS15830 PF01171 PP-loop family FDP11_RS15850 PF08402 TOBE domain FDP11_RS15850 PF00005 ABC transporter FDP11_RS15855 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS15860 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS15865 PF13416 Bacterial extracellular solute-binding protein FDP11_RS15870 PF13416 Bacterial extracellular solute-binding protein FDP11_RS15875 PF02146 Sir2 family FDP11_RS15885 PF00909 Ammonium Transporter Family FDP11_RS15945 PF13247 4Fe-4S dicluster domain FDP11_RS15950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDP11_RS15950 PF00384 Molybdopterin oxidoreductase FDP11_RS15950 PF01568 Molydopterin dinucleotide binding domain FDP11_RS15960 PF02613 Nitrate reductase delta subunit FDP11_RS15980 PF02634 FdhD/NarQ family FDP11_RS15985 PF00005 ABC transporter FDP11_RS15985 PF12848 ABC transporter FDP11_RS15990 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS15995 PF00072 Response regulator receiver domain FDP11_RS15995 PF00158 Sigma-54 interaction domain FDP11_RS15995 PF02954 Bacterial regulatory protein, Fis family FDP11_RS16000 PF12849 PBP superfamily domain FDP11_RS16005 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS16010 PF00005 ABC transporter FDP11_RS16010 PF08402 TOBE domain FDP11_RS16015 PF12804 MobA-like NTP transferase domain FDP11_RS16020 PF03454 MoeA C-terminal region (domain IV) FDP11_RS16020 PF00994 Probable molybdopterin binding domain FDP11_RS16020 PF03453 MoeA N-terminal region (domain I and II) FDP11_RS16030 PF13439 Glycosyltransferase Family 4 FDP11_RS16030 PF00534 Glycosyl transferases group 1 FDP11_RS16035 PF00535 Glycosyl transferase family 2 FDP11_RS16040 PF02397 Bacterial sugar transferase FDP11_RS16050 PF02028 BCCT, betaine/carnitine/choline family transporter FDP11_RS16065 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FDP11_RS16065 PF00271 Helicase conserved C-terminal domain FDP11_RS16065 PF04408 Helicase associated domain (HA2) FDP11_RS16065 PF11898 Domain of unknown function (DUF3418) FDP11_RS16065 PF00270 DEAD/DEAH box helicase FDP11_RS16070 PF02525 Flavodoxin-like fold FDP11_RS16080 PF02613 Nitrate reductase delta subunit FDP11_RS16085 PF04976 DMSO reductase anchor subunit (DmsC) FDP11_RS16090 PF13247 4Fe-4S dicluster domain FDP11_RS16090 PF12800 4Fe-4S binding domain FDP11_RS16095 PF01568 Molydopterin dinucleotide binding domain FDP11_RS16095 PF00384 Molybdopterin oxidoreductase FDP11_RS16095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FDP11_RS16125 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS16125 PF17158 Membrane-associated sensor, integral membrane domain FDP11_RS16135 PF00012 Hsp70 protein FDP11_RS16140 PF00012 Hsp70 protein FDP11_RS16165 PF00005 ABC transporter FDP11_RS16165 PF00664 ABC transporter transmembrane region FDP11_RS16170 PF00664 ABC transporter transmembrane region FDP11_RS16170 PF00005 ABC transporter FDP11_RS16190 PF03222 Tryptophan/tyrosine permease family FDP11_RS16195 PF00465 Iron-containing alcohol dehydrogenase FDP11_RS16200 PF01966 HD domain FDP11_RS16210 PF03741 Integral membrane protein TerC family FDP11_RS16220 PF04055 Radical SAM superfamily FDP11_RS16225 PF11230 Protein of unknown function (DUF3029) FDP11_RS16230 PF01810 LysE type translocator FDP11_RS16235 PF01966 HD domain FDP11_RS16235 PF11871 Domain of unknown function (DUF3391) FDP11_RS16240 PF00563 EAL domain FDP11_RS16240 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS16240 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS16245 PF02954 Bacterial regulatory protein, Fis family FDP11_RS16245 PF00072 Response regulator receiver domain FDP11_RS16245 PF00158 Sigma-54 interaction domain FDP11_RS16250 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS16250 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS16255 PF00939 Sodium:sulfate symporter transmembrane region FDP11_RS16270 PF00300 Histidine phosphatase superfamily (branch 1) FDP11_RS16285 PF00480 ROK family FDP11_RS16325 PF00672 HAMP domain FDP11_RS16325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS16325 PF17202 Single cache domain 3 FDP11_RS16330 PF00877 NlpC/P60 family FDP11_RS16340 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS16340 PF05230 MASE2 domain FDP11_RS16345 PF00072 Response regulator receiver domain FDP11_RS16345 PF01339 CheB methylesterase FDP11_RS16350 PF03881 Fructosamine kinase FDP11_RS16360 PF00677 Lumazine binding domain FDP11_RS16365 PF01554 MatE FDP11_RS16375 PF01068 ATP dependent DNA ligase domain FDP11_RS16375 PF14743 DNA ligase OB-like domain FDP11_RS16380 PF01740 STAS domain FDP11_RS16390 PF10531 SLBB domain FDP11_RS16390 PF02563 Polysaccharide biosynthesis/export protein FDP11_RS16405 PF00072 Response regulator receiver domain FDP11_RS16405 PF02954 Bacterial regulatory protein, Fis family FDP11_RS16405 PF00158 Sigma-54 interaction domain FDP11_RS16410 PF00534 Glycosyl transferases group 1 FDP11_RS16410 PF13439 Glycosyltransferase Family 4 FDP11_RS16415 PF13439 Glycosyltransferase Family 4 FDP11_RS16415 PF00534 Glycosyl transferases group 1 FDP11_RS16525 PF07516 SecA Wing and Scaffold domain FDP11_RS16525 PF02810 SEC-C motif FDP11_RS16525 PF01043 SecA preprotein cross-linking domain FDP11_RS16525 PF07517 SecA DEAD-like domain FDP11_RS16665 PF01926 50S ribosome-binding GTPase FDP11_RS16665 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FDP11_RS16670 PF01926 50S ribosome-binding GTPase FDP11_RS16680 PF01926 50S ribosome-binding GTPase FDP11_RS16720 PF00176 SNF2 family N-terminal domain FDP11_RS16720 PF12419 SNF2 Helicase protein FDP11_RS16720 PF00271 Helicase conserved C-terminal domain FDP11_RS16845 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FDP11_RS16845 PF01872 RibD C-terminal domain FDP11_RS16865 PF13344 Haloacid dehalogenase-like hydrolase FDP11_RS16865 PF00293 NUDIX domain FDP11_RS16900 PF01810 LysE type translocator FDP11_RS16925 PF01809 Putative membrane protein insertion efficiency factor FDP11_RS16965 PF13344 Haloacid dehalogenase-like hydrolase FDP11_RS16965 PF00293 NUDIX domain FDP11_RS16980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS17140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FDP11_RS17140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FDP11_RS17145 PF00583 Acetyltransferase (GNAT) family FDP11_RS17280 PF01809 Putative membrane protein insertion efficiency factor FDP11_RS17340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS17525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS17555 PF01337 Barstar (barnase inhibitor) FDP11_RS17635 PF05656 Protein of unknown function (DUF805) FDP11_RS17705 PF00186 Dihydrofolate reductase FDP11_RS17745 PF00583 Acetyltransferase (GNAT) family FDP11_RS17760 PF01906 Putative heavy-metal-binding FDP11_RS17770 PF01042 Endoribonuclease L-PSP FDP11_RS17785 PF01810 LysE type translocator FDP11_RS17810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FDP11_RS17850 PF00583 Acetyltransferase (GNAT) family FDP11_RS17905 PF01380 SIS domain FDP11_RS17905 PF00571 CBS domain FDP11_RS18055 PF13649 Methyltransferase domain FDP11_RS18085 PF00583 Acetyltransferase (GNAT) family FDP11_RS18150 PF00795 Carbon-nitrogen hydrolase FDP11_RS18305 PF01810 LysE type translocator FDP11_RS18310 PF00589 Phage integrase family FDP11_RS18310 PF13495 Phage integrase, N-terminal SAM-like domain FDP11_RS18325 PF13302 Acetyltransferase (GNAT) domain FDP11_RS18330 PF18024 Helix-turn-helix domain FDP11_RS18330 PF00158 Sigma-54 interaction domain FDP11_RS18335 PF05128 Domain of unknown function (DUF697) FDP11_RS18340 PF04317 YcjX-like family, DUF463 FDP11_RS18355 PF00425 chorismate binding enzyme FDP11_RS18355 PF04715 Anthranilate synthase component I, N terminal region FDP11_RS18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS18360 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS18360 PF00072 Response regulator receiver domain FDP11_RS18360 PF09308 LuxQ, periplasmic FDP11_RS18370 PF00293 NUDIX domain FDP11_RS18375 PF03222 Tryptophan/tyrosine permease family FDP11_RS18380 PF03313 Serine dehydratase alpha chain FDP11_RS18380 PF03315 Serine dehydratase beta chain FDP11_RS18385 PF04940 Sensors of blue-light using FAD FDP11_RS18385 PF00563 EAL domain FDP11_RS18395 PF01242 6-pyruvoyl tetrahydropterin synthase FDP11_RS18400 PF00672 HAMP domain FDP11_RS18400 PF02743 Cache domain FDP11_RS18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS18405 PF01336 OB-fold nucleic acid binding domain FDP11_RS18405 PF00152 tRNA synthetases class II (D, K and N) FDP11_RS18415 PF00155 Aminotransferase class I and II FDP11_RS18415 PF00392 Bacterial regulatory proteins, gntR family FDP11_RS18430 PF00155 Aminotransferase class I and II FDP11_RS18450 PF00672 HAMP domain FDP11_RS18450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS18455 PF02028 BCCT, betaine/carnitine/choline family transporter FDP11_RS18460 PF01047 MarR family FDP11_RS18465 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS18465 PF00072 Response regulator receiver domain FDP11_RS18470 PF07730 Histidine kinase FDP11_RS18470 PF17200 Single Cache domain 2 FDP11_RS18475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FDP11_RS18485 PF03480 Bacterial extracellular solute-binding protein, family 7 FDP11_RS18500 PF00753 Metallo-beta-lactamase superfamily FDP11_RS18505 PF05951 Bacterial protein of unknown function (DUF882) FDP11_RS18510 PF01471 Putative peptidoglycan binding domain FDP11_RS18510 PF03734 L,D-transpeptidase catalytic domain FDP11_RS18535 PF00925 GTP cyclohydrolase II FDP11_RS18545 PF03918 Cytochrome C biogenesis protein FDP11_RS18550 PF08534 Redoxin FDP11_RS18555 PF01578 Cytochrome C assembly protein FDP11_RS18555 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FDP11_RS18560 PF03916 Polysulphide reductase, NrfD FDP11_RS18565 PF13247 4Fe-4S dicluster domain FDP11_RS18575 PF02335 Cytochrome c552 FDP11_RS18590 PF03989 DNA gyrase C-terminal domain, beta-propeller FDP11_RS18590 PF00521 DNA gyrase/topoisomerase IV, subunit A FDP11_RS18600 PF03477 ATP cone domain FDP11_RS18600 PF02867 Ribonucleotide reductase, barrel domain FDP11_RS18600 PF00317 Ribonucleotide reductase, all-alpha domain FDP11_RS18605 PF00268 Ribonucleotide reductase, small chain FDP11_RS18615 PF00994 Probable molybdopterin binding domain FDP11_RS18630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDP11_RS18635 PF16653 Saccharopine dehydrogenase C-terminal domain FDP11_RS18635 PF03435 Saccharopine dehydrogenase NADP binding domain FDP11_RS18640 PF00202 Aminotransferase class-III FDP11_RS18665 PF01066 CDP-alcohol phosphatidyltransferase FDP11_RS18670 PF08459 UvrC Helix-hairpin-helix N-terminal FDP11_RS18670 PF02151 UvrB/uvrC motif FDP11_RS18670 PF01541 GIY-YIG catalytic domain FDP11_RS18675 PF00072 Response regulator receiver domain FDP11_RS18675 PF00196 Bacterial regulatory proteins, luxR family FDP11_RS18680 PF03104 DNA polymerase family B, exonuclease domain FDP11_RS18680 PF00136 DNA polymerase family B FDP11_RS18690 PF09285 Elongation factor P, C-terminal FDP11_RS18690 PF08207 Elongation factor P (EF-P) KOW-like domain FDP11_RS18690 PF01132 Elongation factor P (EF-P) OB domain FDP11_RS18695 PF04269 Protein of unknown function, DUF440 FDP11_RS18700 PF00849 RNA pseudouridylate synthase FDP11_RS18700 PF01479 S4 domain FDP11_RS18710 PF01300 Telomere recombination FDP11_RS18715 PF02811 PHP domain FDP11_RS18720 PF08056 Tryptophan operon leader peptide FDP11_RS18725 PF00425 chorismate binding enzyme FDP11_RS18725 PF04715 Anthranilate synthase component I, N terminal region FDP11_RS18730 PF00117 Glutamine amidotransferase class-I FDP11_RS18735 PF00591 Glycosyl transferase family, a/b domain FDP11_RS18735 PF02885 Glycosyl transferase family, helical bundle domain FDP11_RS18740 PF00218 Indole-3-glycerol phosphate synthase FDP11_RS18740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FDP11_RS18745 PF00291 Pyridoxal-phosphate dependent enzyme FDP11_RS18750 PF00290 Tryptophan synthase alpha chain FDP11_RS18755 PF00027 Cyclic nucleotide-binding domain FDP11_RS18755 PF13545 Crp-like helix-turn-helix domain FDP11_RS18760 PF00501 AMP-binding enzyme FDP11_RS18760 PF13193 AMP-binding enzyme C-terminal domain FDP11_RS18765 PF00375 Sodium:dicarboxylate symporter family FDP11_RS18770 PF17327 Acyl homoserine lactone synthase FDP11_RS18775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS18775 PF00072 Response regulator receiver domain FDP11_RS18785 PF04279 Intracellular septation protein A FDP11_RS18790 PF03061 Thioesterase superfamily FDP11_RS18795 PF03795 YCII-related domain FDP11_RS18805 PF01717 Cobalamin-independent synthase, Catalytic domain FDP11_RS18805 PF08267 Cobalamin-independent synthase, N-terminal domain FDP11_RS18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS18810 PF03466 LysR substrate binding domain FDP11_RS18825 PF00360 Phytochrome region FDP11_RS18825 PF00563 EAL domain FDP11_RS18825 PF01590 GAF domain FDP11_RS18825 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS18830 PF08497 Radical SAM N-terminal FDP11_RS18830 PF04055 Radical SAM superfamily FDP11_RS18830 PF11842 Domain of unknown function (DUF3362) FDP11_RS18835 PF00672 HAMP domain FDP11_RS18835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS18840 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS18840 PF00072 Response regulator receiver domain FDP11_RS18845 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS18845 PF00672 HAMP domain FDP11_RS18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS18865 PF03466 LysR substrate binding domain FDP11_RS18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS18870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS18870 PF00529 HlyD membrane-fusion protein of T1SS FDP11_RS18885 PF00265 Thymidine kinase FDP11_RS18890 PF01406 tRNA synthetases class I (C) catalytic domain FDP11_RS18890 PF09190 DALR domain FDP11_RS18895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDP11_RS18900 PF00149 Calcineurin-like phosphoesterase FDP11_RS18905 PF00563 EAL domain FDP11_RS18905 PF08668 HDOD domain FDP11_RS18910 PF02810 SEC-C motif FDP11_RS18915 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FDP11_RS18915 PF01502 Phosphoribosyl-AMP cyclohydrolase FDP11_RS18920 PF00977 Histidine biosynthesis protein FDP11_RS18925 PF00977 Histidine biosynthesis protein FDP11_RS18930 PF00117 Glutamine amidotransferase class-I FDP11_RS18935 PF00475 Imidazoleglycerol-phosphate dehydratase FDP11_RS18935 PF08645 Polynucleotide kinase 3 phosphatase FDP11_RS18940 PF00155 Aminotransferase class I and II FDP11_RS18945 PF00815 Histidinol dehydrogenase FDP11_RS18950 PF01634 ATP phosphoribosyltransferase FDP11_RS18950 PF08029 HisG, C-terminal domain FDP11_RS18955 PF00072 Response regulator receiver domain FDP11_RS18955 PF00158 Sigma-54 interaction domain FDP11_RS18955 PF02954 Bacterial regulatory protein, Fis family FDP11_RS18965 PF03553 Na+/H+ antiporter family FDP11_RS18970 PF00816 H-NS histone family FDP11_RS18975 PF00294 pfkB family carbohydrate kinase FDP11_RS18990 PF04356 Protein of unknown function (DUF489) FDP11_RS18995 PF08328 Adenylosuccinate lyase C-terminal FDP11_RS18995 PF00206 Lyase FDP11_RS19030 PF00106 short chain dehydrogenase FDP11_RS19040 PF01435 Peptidase family M48 FDP11_RS19055 PF08241 Methyltransferase domain FDP11_RS19060 PF00155 Aminotransferase class I and II FDP11_RS19065 PF04055 Radical SAM superfamily FDP11_RS19065 PF06968 Biotin and Thiamin Synthesis associated domain FDP11_RS19070 PF00202 Aminotransferase class-III FDP11_RS19075 PF01258 Prokaryotic dksA/traR C4-type zinc finger FDP11_RS19085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDP11_RS19085 PF02403 Seryl-tRNA synthetase N-terminal domain FDP11_RS19090 PF12002 MgsA AAA+ ATPase C terminal FDP11_RS19090 PF00004 ATPase family associated with various cellular activities (AAA) FDP11_RS19090 PF16193 AAA C-terminal domain FDP11_RS19095 PF03548 Outer membrane lipoprotein carrier protein LolA FDP11_RS19100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FDP11_RS19100 PF01580 FtsK/SpoIIIE family FDP11_RS19100 PF09397 Ftsk gamma domain FDP11_RS19100 PF17854 FtsK alpha domain FDP11_RS19105 PF01037 Lrp/AsnC ligand binding domain FDP11_RS19110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FDP11_RS19110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FDP11_RS19120 PF03466 LysR substrate binding domain FDP11_RS19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS19130 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FDP11_RS19135 PF03372 Endonuclease/Exonuclease/phosphatase family FDP11_RS19145 PF00579 tRNA synthetases class I (W and Y) FDP11_RS19160 PF00873 AcrB/AcrD/AcrF family FDP11_RS19165 PF00529 HlyD membrane-fusion protein of T1SS FDP11_RS19165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS19170 PF02743 Cache domain FDP11_RS19170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS19170 PF00672 HAMP domain FDP11_RS19180 PF06610 L-alanine exporter FDP11_RS19185 PF00072 Response regulator receiver domain FDP11_RS19185 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS19185 PF09308 LuxQ, periplasmic FDP11_RS19185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS19195 PF03738 Glutathionylspermidine synthase preATP-grasp FDP11_RS19205 PF03994 Domain of Unknown Function (DUF350) FDP11_RS19215 PF02445 Quinolinate synthetase A protein FDP11_RS19220 PF00072 Response regulator receiver domain FDP11_RS19220 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS19225 PF00128 Alpha amylase, catalytic domain FDP11_RS19225 PF02903 Alpha amylase, N-terminal ig-like domain FDP11_RS19230 PF00005 ABC transporter FDP11_RS19235 PF02653 Branched-chain amino acid transport system / permease component FDP11_RS19245 PF04217 Protein of unknown function, DUF412 FDP11_RS19250 PF00871 Acetokinase family FDP11_RS19255 PF07085 DRTGG domain FDP11_RS19255 PF01515 Phosphate acetyl/butaryl transferase FDP11_RS19260 PF13194 Domain of unknown function (DUF4010) FDP11_RS19270 PF13409 Glutathione S-transferase, N-terminal domain FDP11_RS19275 PF00005 ABC transporter FDP11_RS19275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS19280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS19280 PF00005 ABC transporter FDP11_RS19285 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS19285 PF12911 N-terminal TM domain of oligopeptide transport permease C FDP11_RS19290 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS19295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS19300 PF02391 MoaE protein FDP11_RS19305 PF02597 ThiS family FDP11_RS19310 PF01967 MoaC family FDP11_RS19315 PF00994 Probable molybdopterin binding domain FDP11_RS19320 PF06463 Molybdenum Cofactor Synthesis C FDP11_RS19320 PF04055 Radical SAM superfamily FDP11_RS19325 PF01933 Uncharacterised protein family UPF0052 FDP11_RS19330 PF01627 Hpt domain FDP11_RS19335 PF00072 Response regulator receiver domain FDP11_RS19335 PF02954 Bacterial regulatory protein, Fis family FDP11_RS19335 PF00158 Sigma-54 interaction domain FDP11_RS19340 PF17757 UvrB interaction domain FDP11_RS19340 PF12344 Ultra-violet resistance protein B FDP11_RS19340 PF04851 Type III restriction enzyme, res subunit FDP11_RS19340 PF00271 Helicase conserved C-terminal domain FDP11_RS19340 PF02151 UvrB/uvrC motif FDP11_RS19355 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS19360 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS19365 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS19370 PF00005 ABC transporter FDP11_RS19385 PF01228 Glycine radical FDP11_RS19385 PF02901 Pyruvate formate lyase-like FDP11_RS19395 PF04055 Radical SAM superfamily FDP11_RS19405 PF03887 YfbU domain FDP11_RS19410 PF08298 PrkA AAA domain FDP11_RS19410 PF06798 PrkA serine protein kinase C-terminal domain FDP11_RS19415 PF04285 Protein of unknown function (DUF444) FDP11_RS19420 PF04293 SpoVR like protein FDP11_RS19425 PF02348 Cytidylyltransferase FDP11_RS19430 PF03966 Trm112p-like protein FDP11_RS19435 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FDP11_RS19440 PF00005 ABC transporter FDP11_RS19440 PF00664 ABC transporter transmembrane region FDP11_RS19445 PF13567 Domain of unknown function (DUF4131) FDP11_RS19445 PF00753 Metallo-beta-lactamase superfamily FDP11_RS19445 PF03772 Competence protein FDP11_RS19455 PF02687 FtsX-like permease family FDP11_RS19455 PF12704 MacB-like periplasmic core domain FDP11_RS19460 PF00005 ABC transporter FDP11_RS19465 PF02687 FtsX-like permease family FDP11_RS19465 PF12704 MacB-like periplasmic core domain FDP11_RS19475 PF02559 CarD-like/TRCF domain FDP11_RS19475 PF03461 TRCF domain FDP11_RS19475 PF00271 Helicase conserved C-terminal domain FDP11_RS19475 PF00270 DEAD/DEAH box helicase FDP11_RS19475 PF17757 UvrB interaction domain FDP11_RS19490 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS19495 PF05728 Uncharacterised protein family (UPF0227) FDP11_RS19505 PF13036 Peptidoglycan-synthase activator LpoB FDP11_RS19505 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FDP11_RS19520 PF01230 HIT domain FDP11_RS19525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS19525 PF00672 HAMP domain FDP11_RS19535 PF01048 Phosphorylase superfamily FDP11_RS19540 PF00403 Heavy-metal-associated domain FDP11_RS19545 PF00571 CBS domain FDP11_RS19545 PF00478 IMP dehydrogenase / GMP reductase domain FDP11_RS19555 PF11953 Domain of unknown function (DUF3470) FDP11_RS19555 PF00037 4Fe-4S binding domain FDP11_RS19560 PF08032 RNA 2'-O ribose methyltransferase substrate binding FDP11_RS19560 PF00588 SpoU rRNA Methylase family FDP11_RS19570 PF17152 Periplasmic sensor domain FDP11_RS19570 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS19580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FDP11_RS19585 PF09619 Type III secretion system lipoprotein chaperone (YscW) FDP11_RS19600 PF13404 AsnC-type helix-turn-helix domain FDP11_RS19600 PF01037 Lrp/AsnC ligand binding domain FDP11_RS19605 PF00291 Pyridoxal-phosphate dependent enzyme FDP11_RS19625 PF00873 AcrB/AcrD/AcrF family FDP11_RS19630 PF13533 Biotin-lipoyl like FDP11_RS19675 PF07690 Major Facilitator Superfamily FDP11_RS19680 PF03601 Conserved hypothetical protein 698 FDP11_RS19690 PF13193 AMP-binding enzyme C-terminal domain FDP11_RS19690 PF00501 AMP-binding enzyme FDP11_RS19695 PF13378 Enolase C-terminal domain-like FDP11_RS19700 PF00378 Enoyl-CoA hydratase/isomerase FDP11_RS19705 PF12697 Alpha/beta hydrolase family FDP11_RS19710 PF16582 Middle domain of thiamine pyrophosphate FDP11_RS19710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDP11_RS19710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDP11_RS19715 PF00425 chorismate binding enzyme FDP11_RS19720 PF00155 Aminotransferase class I and II FDP11_RS19730 PF13286 Phosphohydrolase-associated domain FDP11_RS19730 PF01966 HD domain FDP11_RS19750 PF13145 PPIC-type PPIASE domain FDP11_RS19755 PF00216 Bacterial DNA-binding protein FDP11_RS19760 PF00004 ATPase family associated with various cellular activities (AAA) FDP11_RS19760 PF05362 Lon protease (S16) C-terminal proteolytic domain FDP11_RS19760 PF02190 ATP-dependent protease La (LON) substrate-binding domain FDP11_RS19765 PF06689 ClpX C4-type zinc finger FDP11_RS19765 PF10431 C-terminal, D2-small domain, of ClpB protein FDP11_RS19765 PF07724 AAA domain (Cdc48 subfamily) FDP11_RS19770 PF00574 Clp protease FDP11_RS19775 PF05697 Bacterial trigger factor protein (TF) FDP11_RS19775 PF05698 Bacterial trigger factor protein (TF) C-terminus FDP11_RS19775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDP11_RS19785 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS19785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS19785 PF02743 Cache domain FDP11_RS19790 PF00072 Response regulator receiver domain FDP11_RS19790 PF00158 Sigma-54 interaction domain FDP11_RS19790 PF02954 Bacterial regulatory protein, Fis family FDP11_RS19800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FDP11_RS19805 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FDP11_RS19810 PF03480 Bacterial extracellular solute-binding protein, family 7 FDP11_RS19815 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FDP11_RS19830 PF02386 Cation transport protein FDP11_RS19835 PF02080 TrkA-C domain FDP11_RS19835 PF02254 TrkA-N domain FDP11_RS19840 PF00270 DEAD/DEAH box helicase FDP11_RS19840 PF00271 Helicase conserved C-terminal domain FDP11_RS19845 PF00571 CBS domain FDP11_RS19845 PF03471 Transporter associated domain FDP11_RS19845 PF01595 Cyclin M transmembrane N-terminal domain FDP11_RS19855 PF04820 Tryptophan halogenase FDP11_RS19880 PF00550 Phosphopantetheine attachment site FDP11_RS19885 PF00550 Phosphopantetheine attachment site FDP11_RS19900 PF07977 FabA-like domain FDP11_RS19905 PF00535 Glycosyl transferase family 2 FDP11_RS19910 PF00221 Aromatic amino acid lyase FDP11_RS19935 PF02801 Beta-ketoacyl synthase, C-terminal domain FDP11_RS19935 PF00109 Beta-ketoacyl synthase, N-terminal domain FDP11_RS19940 PF07977 FabA-like domain FDP11_RS19950 PF02801 Beta-ketoacyl synthase, C-terminal domain FDP11_RS19950 PF00109 Beta-ketoacyl synthase, N-terminal domain FDP11_RS19960 PF14659 Phage integrase, N-terminal SAM-like domain FDP11_RS19960 PF13356 Arm DNA-binding domain FDP11_RS19960 PF00589 Phage integrase family FDP11_RS19965 PF07804 HipA-like C-terminal domain FDP11_RS19965 PF13657 HipA N-terminal domain FDP11_RS19970 PF01381 Helix-turn-helix FDP11_RS20010 PF08463 EcoEI R protein C-terminal FDP11_RS20010 PF04851 Type III restriction enzyme, res subunit FDP11_RS20010 PF00271 Helicase conserved C-terminal domain FDP11_RS20010 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FDP11_RS20020 PF01555 DNA methylase FDP11_RS20040 PF02384 N-6 DNA Methylase FDP11_RS20040 PF12161 HsdM N-terminal domain FDP11_RS20045 PF01420 Type I restriction modification DNA specificity domain FDP11_RS20080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FDP11_RS20080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FDP11_RS20085 PF07670 Nucleoside recognition FDP11_RS20085 PF07662 Na+ dependent nucleoside transporter C-terminus FDP11_RS20085 PF01773 Na+ dependent nucleoside transporter N-terminus FDP11_RS20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS20090 PF03466 LysR substrate binding domain FDP11_RS20095 PF13406 Transglycosylase SLT domain FDP11_RS20100 PF05166 YcgL domain FDP11_RS20105 PF05209 Septum formation inhibitor MinC, N-terminal domain FDP11_RS20105 PF03775 Septum formation inhibitor MinC, C-terminal domain FDP11_RS20110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FDP11_RS20115 PF03776 Septum formation topological specificity factor MinE FDP11_RS20120 PF01612 3'-5' exonuclease FDP11_RS20120 PF00570 HRDC domain FDP11_RS20125 PF13193 AMP-binding enzyme C-terminal domain FDP11_RS20125 PF00501 AMP-binding enzyme FDP11_RS20130 PF00561 alpha/beta hydrolase fold FDP11_RS20145 PF00814 Glycoprotease family FDP11_RS20150 PF13307 Helicase C-terminal domain FDP11_RS20150 PF04851 Type III restriction enzyme, res subunit FDP11_RS20155 PF00551 Formyl transferase FDP11_RS20155 PF01842 ACT domain FDP11_RS20160 PF00089 Trypsin FDP11_RS20170 PF06185 YecM protein FDP11_RS20175 PF05746 DALR anticodon binding domain FDP11_RS20175 PF03485 Arginyl tRNA synthetase N terminal domain FDP11_RS20175 PF00750 tRNA synthetases class I (R) FDP11_RS20190 PF02421 Ferrous iron transport protein B FDP11_RS20190 PF07664 Ferrous iron transport protein B C terminus FDP11_RS20190 PF07670 Nucleoside recognition FDP11_RS20190 PF17910 FeoB cytosolic helical domain FDP11_RS20195 PF04023 FeoA domain FDP11_RS20200 PF12833 Helix-turn-helix domain FDP11_RS20200 PF02311 AraC-like ligand binding domain FDP11_RS20205 PF01297 Zinc-uptake complex component A periplasmic FDP11_RS20210 PF00005 ABC transporter FDP11_RS20215 PF00950 ABC 3 transport family FDP11_RS20220 PF13230 Glutamine amidotransferases class-II FDP11_RS20225 PF13580 SIS domain FDP11_RS20230 PF09317 Domain of unknown function (DUF1974) FDP11_RS20230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FDP11_RS20230 PF02770 Acyl-CoA dehydrogenase, middle domain FDP11_RS20230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FDP11_RS20235 PF01740 STAS domain FDP11_RS20235 PF00916 Sulfate permease family FDP11_RS20240 PF00583 Acetyltransferase (GNAT) family FDP11_RS20260 PF00929 Exonuclease FDP11_RS20265 PF00075 RNase H FDP11_RS20270 PF08241 Methyltransferase domain FDP11_RS20275 PF16123 Hydroxyacylglutathione hydrolase C-terminus FDP11_RS20275 PF00753 Metallo-beta-lactamase superfamily FDP11_RS20280 PF01464 Transglycosylase SLT domain FDP11_RS20280 PF01476 LysM domain FDP11_RS20290 PF03372 Endonuclease/Exonuclease/phosphatase family FDP11_RS20295 PF00543 Nitrogen regulatory protein P-II FDP11_RS20300 PF00034 Cytochrome c FDP11_RS20305 PF09179 TilS substrate binding domain FDP11_RS20305 PF01171 PP-loop family FDP11_RS20305 PF11734 TilS substrate C-terminal domain FDP11_RS20310 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FDP11_RS20315 PF02811 PHP domain FDP11_RS20315 PF14579 Helix-hairpin-helix motif FDP11_RS20315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDP11_RS20315 PF01336 OB-fold nucleic acid binding domain FDP11_RS20315 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDP11_RS20320 PF01351 Ribonuclease HII FDP11_RS20325 PF02684 Lipid-A-disaccharide synthetase FDP11_RS20330 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS20330 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FDP11_RS20335 PF07977 FabA-like domain FDP11_RS20340 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS20340 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FDP11_RS20345 PF03938 Outer membrane protein (OmpH-like) FDP11_RS20350 PF01103 Surface antigen FDP11_RS20350 PF07244 Surface antigen variable number repeat FDP11_RS20355 PF02163 Peptidase family M50 FDP11_RS20355 PF17820 PDZ domain FDP11_RS20360 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FDP11_RS20360 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FDP11_RS20360 PF13288 DXP reductoisomerase C-terminal domain FDP11_RS20370 PF01255 Putative undecaprenyl diphosphate synthase FDP11_RS20375 PF01765 Ribosome recycling factor FDP11_RS20380 PF00696 Amino acid kinase family FDP11_RS20385 PF00889 Elongation factor TS FDP11_RS20390 PF00318 Ribosomal protein S2 FDP11_RS20395 PF00557 Metallopeptidase family M24 FDP11_RS20400 PF01909 Nucleotidyltransferase domain FDP11_RS20400 PF01966 HD domain FDP11_RS20400 PF01842 ACT domain FDP11_RS20400 PF08335 GlnD PII-uridylyltransferase FDP11_RS20405 PF11944 Protein of unknown function (DUF3461) FDP11_RS20410 PF00849 RNA pseudouridylate synthase FDP11_RS20415 PF04287 tRNA pseudouridine synthase C FDP11_RS20440 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FDP11_RS20445 PF03806 AbgT putative transporter family FDP11_RS20450 PF00444 Ribosomal protein L36 FDP11_RS20455 PF01197 Ribosomal protein L31 FDP11_RS20460 PF18389 TrmO C-terminal domain FDP11_RS20460 PF01980 tRNA-methyltransferase O FDP11_RS20465 PF04073 Aminoacyl-tRNA editing domain FDP11_RS20465 PF03129 Anticodon binding domain FDP11_RS20465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FDP11_RS20475 PF06786 Uncharacterised protein family (UPF0253) FDP11_RS20485 PF00209 Sodium:neurotransmitter symporter family FDP11_RS20500 PF01272 Transcription elongation factor, GreA/GreB, C-term FDP11_RS20500 PF03449 Transcription elongation factor, N-terminal FDP11_RS20505 PF09382 RQC domain FDP11_RS20505 PF00570 HRDC domain FDP11_RS20505 PF16124 RecQ zinc-binding FDP11_RS20505 PF00271 Helicase conserved C-terminal domain FDP11_RS20505 PF00270 DEAD/DEAH box helicase FDP11_RS20510 PF11798 IMS family HHH motif FDP11_RS20510 PF00817 impB/mucB/samB family FDP11_RS20510 PF11799 impB/mucB/samB family C-terminal domain FDP11_RS20525 PF02424 ApbE family FDP11_RS20530 PF00970 Oxidoreductase FAD-binding domain FDP11_RS20530 PF00111 2Fe-2S iron-sulfur cluster binding domain FDP11_RS20530 PF00175 Oxidoreductase NAD-binding domain FDP11_RS20535 PF02508 Rnf-Nqr subunit, membrane protein FDP11_RS20540 PF02508 Rnf-Nqr subunit, membrane protein FDP11_RS20545 PF04205 FMN-binding domain FDP11_RS20550 PF03116 NQR2, RnfD, RnfE family FDP11_RS20555 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FDP11_RS20555 PF11973 NQRA C-terminal domain FDP11_RS20560 PF01722 BolA-like protein FDP11_RS20565 PF05175 Methyltransferase small domain FDP11_RS20570 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FDP11_RS20570 PF03923 Uncharacterized lipoprotein FDP11_RS20575 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FDP11_RS20580 PF07690 Major Facilitator Superfamily FDP11_RS20590 PF04542 Sigma-70 region 2 FDP11_RS20590 PF04545 Sigma-70, region 4 FDP11_RS20605 PF03502 Nucleoside-specific channel-forming protein, Tsx FDP11_RS20610 PF08546 Ketopantoate reductase PanE/ApbA C terminal FDP11_RS20610 PF02558 Ketopantoate reductase PanE/ApbA FDP11_RS20615 PF01965 DJ-1/PfpI family FDP11_RS20620 PF00266 Aminotransferase class-V FDP11_RS20625 PF17158 Membrane-associated sensor, integral membrane domain FDP11_RS20625 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS20630 PF02657 Fe-S metabolism associated domain FDP11_RS20635 PF00899 ThiF family FDP11_RS20640 PF06725 3D domain FDP11_RS20640 PF03562 MltA specific insert domain FDP11_RS20650 PF00696 Amino acid kinase family FDP11_RS20650 PF00583 Acetyltransferase (GNAT) family FDP11_RS20670 PF13538 UvrD-like helicase C-terminal domain FDP11_RS20675 PF12705 PD-(D/E)XK nuclease superfamily FDP11_RS20675 PF00580 UvrD/REP helicase N-terminal domain FDP11_RS20675 PF13361 UvrD-like helicase C-terminal domain FDP11_RS20680 PF17946 RecC C-terminal domain FDP11_RS20685 PF11893 Domain of unknown function (DUF3413) FDP11_RS20685 PF00884 Sulfatase FDP11_RS20695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS20695 PF03466 LysR substrate binding domain FDP11_RS20700 PF07130 YebG protein FDP11_RS20705 PF14602 Hexapeptide repeat of succinyl-transferase FDP11_RS20705 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FDP11_RS20710 PF03009 Glycerophosphoryl diester phosphodiesterase family FDP11_RS20715 PF07690 Major Facilitator Superfamily FDP11_RS20720 PF00230 Major intrinsic protein FDP11_RS20725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FDP11_RS20725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FDP11_RS20730 PF08220 DeoR-like helix-turn-helix domain FDP11_RS20730 PF00455 DeoR C terminal sensor domain FDP11_RS20735 PF01266 FAD dependent oxidoreductase FDP11_RS20735 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FDP11_RS20740 PF01544 CorA-like Mg2+ transporter protein FDP11_RS20755 PF01588 Putative tRNA binding domain FDP11_RS20760 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS20765 PF00929 Exonuclease FDP11_RS20765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FDP11_RS20765 PF14579 Helix-hairpin-helix motif FDP11_RS20765 PF07733 Bacterial DNA polymerase III alpha NTPase domain FDP11_RS20765 PF02811 PHP domain FDP11_RS20775 PF00474 Sodium:solute symporter family FDP11_RS20780 PF01263 Aldose 1-epimerase FDP11_RS20785 PF10509 Galactokinase galactose-binding signature FDP11_RS20785 PF00288 GHMP kinases N terminal domain FDP11_RS20785 PF08544 GHMP kinases C terminal FDP11_RS20790 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FDP11_RS20790 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FDP11_RS20795 PF16363 GDP-mannose 4,6 dehydratase FDP11_RS20800 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS20805 PF16353 Domain of unknown function(DUF4981) FDP11_RS20805 PF02929 Beta galactosidase small chain FDP11_RS20805 PF02837 Glycosyl hydrolases family 2, sugar binding domain FDP11_RS20805 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FDP11_RS20805 PF00703 Glycosyl hydrolases family 2 FDP11_RS20810 PF04074 YhcH/YjgK/YiaL FDP11_RS20815 PF13520 Amino acid permease FDP11_RS20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS20820 PF03466 LysR substrate binding domain FDP11_RS20850 PF00437 Type II/IV secretion system protein FDP11_RS20880 PF04972 BON domain FDP11_RS20880 PF13629 Pilus formation protein N terminal region FDP11_RS20880 PF00263 Bacterial type II and III secretion system protein FDP11_RS20905 PF02805 Metal binding domain of Ada FDP11_RS20905 PF12833 Helix-turn-helix domain FDP11_RS20910 PF00501 AMP-binding enzyme FDP11_RS20920 PF03466 LysR substrate binding domain FDP11_RS20920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS20925 PF14492 Elongation Factor G, domain II FDP11_RS20925 PF03144 Elongation factor Tu domain 2 FDP11_RS20925 PF00009 Elongation factor Tu GTP binding domain FDP11_RS20925 PF03764 Elongation factor G, domain IV FDP11_RS20925 PF00679 Elongation factor G C-terminus FDP11_RS20930 PF18073 Rubredoxin metal binding domain FDP11_RS20940 PF18429 Domain of unknown function (DUF5609) FDP11_RS20950 PF01048 Phosphorylase superfamily FDP11_RS20955 PF01676 Metalloenzyme superfamily FDP11_RS20960 PF00591 Glycosyl transferase family, a/b domain FDP11_RS20960 PF02885 Glycosyl transferase family, helical bundle domain FDP11_RS20960 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FDP11_RS20965 PF01791 DeoC/LacD family aldolase FDP11_RS20970 PF01773 Na+ dependent nucleoside transporter N-terminus FDP11_RS20970 PF07662 Na+ dependent nucleoside transporter C-terminus FDP11_RS20970 PF07670 Nucleoside recognition FDP11_RS20975 PF01026 TatD related DNase FDP11_RS20985 PF00009 Elongation factor Tu GTP binding domain FDP11_RS20985 PF03144 Elongation factor Tu domain 2 FDP11_RS20985 PF16658 Class II release factor RF3, C-terminal domain FDP11_RS21005 PF13508 Acetyltransferase (GNAT) domain FDP11_RS21010 PF02036 SCP-2 sterol transfer family FDP11_RS21015 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS21015 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS21015 PF00563 EAL domain FDP11_RS21020 PF01136 Peptidase family U32 FDP11_RS21025 PF01136 Peptidase family U32 FDP11_RS21030 PF01554 MatE FDP11_RS21040 PF13181 Tetratricopeptide repeat FDP11_RS21040 PF07719 Tetratricopeptide repeat FDP11_RS21045 PF00575 S1 RNA binding domain FDP11_RS21045 PF03725 3' exoribonuclease family, domain 2 FDP11_RS21045 PF01138 3' exoribonuclease family, domain 1 FDP11_RS21045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FDP11_RS21045 PF00013 KH domain FDP11_RS21050 PF00312 Ribosomal protein S15 FDP11_RS21055 PF16198 tRNA pseudouridylate synthase B C-terminal domain FDP11_RS21055 PF09157 Pseudouridine synthase II TruB, C-terminal FDP11_RS21055 PF01509 TruB family pseudouridylate synthase (N terminal domain) FDP11_RS21060 PF02033 Ribosome-binding factor A FDP11_RS21065 PF04760 Translation initiation factor IF-2, N-terminal region FDP11_RS21065 PF11987 Translation-initiation factor 2 FDP11_RS21065 PF08364 Bacterial translation initiation factor IF-2 associated region FDP11_RS21065 PF00009 Elongation factor Tu GTP binding domain FDP11_RS21070 PF08529 NusA N-terminal domain FDP11_RS21070 PF13184 NusA-like KH domain FDP11_RS21070 PF00575 S1 RNA binding domain FDP11_RS21075 PF17384 RimP C-terminal SH3 domain FDP11_RS21075 PF02576 RimP N-terminal domain FDP11_RS21090 PF03840 Preprotein translocase SecG subunit FDP11_RS21095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDP11_RS21095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDP11_RS21095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDP11_RS21095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDP11_RS21100 PF00809 Pterin binding enzyme FDP11_RS21105 PF00004 ATPase family associated with various cellular activities (AAA) FDP11_RS21105 PF17862 AAA+ lid domain FDP11_RS21105 PF01434 Peptidase family M41 FDP11_RS21105 PF06480 FtsH Extracellular FDP11_RS21110 PF01728 FtsJ-like methyltransferase FDP11_RS21115 PF01985 CRS1 / YhbY (CRM) domain FDP11_RS21120 PF01272 Transcription elongation factor, GreA/GreB, C-term FDP11_RS21120 PF03449 Transcription elongation factor, N-terminal FDP11_RS21125 PF13609 Gram-negative porin FDP11_RS21130 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FDP11_RS21140 PF14437 MafB19-like deaminase FDP11_RS21145 PF03806 AbgT putative transporter family FDP11_RS21170 PF00114 Pilin (bacterial filament) FDP11_RS21170 PF07963 Prokaryotic N-terminal methylation motif FDP11_RS21175 PF00226 DnaJ domain FDP11_RS21175 PF01556 DnaJ C terminal domain FDP11_RS21175 PF00684 DnaJ central domain FDP11_RS21180 PF00012 Hsp70 protein FDP11_RS21185 PF00375 Sodium:dicarboxylate symporter family FDP11_RS21190 PF01025 GrpE FDP11_RS21195 PF01513 ATP-NAD kinase FDP11_RS21205 PF02463 RecF/RecN/SMC N terminal domain FDP11_RS21210 PF04355 SmpA / OmlA family FDP11_RS21215 PF03658 RnfH family Ubiquitin FDP11_RS21220 PF03364 Polyketide cyclase / dehydrase and lipid transport FDP11_RS21225 PF01668 SmpB protein FDP11_RS21265 PF02384 N-6 DNA Methylase FDP11_RS21285 PF03466 LysR substrate binding domain FDP11_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS21290 PF00795 Carbon-nitrogen hydrolase FDP11_RS21290 PF00583 Acetyltransferase (GNAT) family FDP11_RS21310 PF00202 Aminotransferase class-III FDP11_RS21315 PF01053 Cys/Met metabolism PLP-dependent enzyme FDP11_RS21320 PF07969 Amidohydrolase family FDP11_RS21335 PF03466 LysR substrate binding domain FDP11_RS21335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS21340 PF01266 FAD dependent oxidoreductase FDP11_RS21345 PF01235 Sodium:alanine symporter family FDP11_RS21355 PF01184 GPR1/FUN34/yaaH family FDP11_RS21360 PF06483 Chitinase C FDP11_RS21360 PF00704 Glycosyl hydrolases family 18 FDP11_RS21365 PF03553 Na+/H+ antiporter family FDP11_RS21370 PF02540 NAD synthase FDP11_RS21370 PF00117 Glutamine amidotransferase class-I FDP11_RS21370 PF00958 GMP synthase C terminal domain FDP11_RS21375 PF00571 CBS domain FDP11_RS21375 PF00478 IMP dehydrogenase / GMP reductase domain FDP11_RS21380 PF02601 Exonuclease VII, large subunit FDP11_RS21380 PF13742 OB-fold nucleic acid binding domain FDP11_RS21395 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FDP11_RS21395 PF01926 50S ribosome-binding GTPase FDP11_RS21400 PF13360 PQQ-like domain FDP11_RS21405 PF09976 Tetratricopeptide repeat-like domain FDP11_RS21410 PF03129 Anticodon binding domain FDP11_RS21410 PF13393 Histidyl-tRNA synthetase FDP11_RS21415 PF04551 GcpE protein FDP11_RS21420 PF13464 Domain of unknown function (DUF4115) FDP11_RS21425 PF04055 Radical SAM superfamily FDP11_RS21430 PF00334 Nucleoside diphosphate kinase FDP11_RS21435 PF12404 Peptidase FDP11_RS21435 PF00883 Cytosol aminopeptidase family, catalytic domain FDP11_RS21440 PF04384 Iron-sulphur cluster assembly FDP11_RS21445 PF00111 2Fe-2S iron-sulfur cluster binding domain FDP11_RS21450 PF00012 Hsp70 protein FDP11_RS21455 PF00226 DnaJ domain FDP11_RS21455 PF07743 HSCB C-terminal oligomerisation domain FDP11_RS21460 PF01521 Iron-sulphur cluster biosynthesis FDP11_RS21465 PF01592 NifU-like N terminal domain FDP11_RS21470 PF00266 Aminotransferase class-V FDP11_RS21475 PF02082 Transcriptional regulator FDP11_RS21480 PF00588 SpoU rRNA Methylase family FDP11_RS21485 PF00459 Inositol monophosphatase family FDP11_RS21490 PF02355 Protein export membrane protein FDP11_RS21490 PF07549 SecD/SecF GG Motif FDP11_RS21495 PF02355 Protein export membrane protein FDP11_RS21495 PF13721 SecD export protein N-terminal TM region FDP11_RS21495 PF07549 SecD/SecF GG Motif FDP11_RS21500 PF02699 Preprotein translocase subunit FDP11_RS21505 PF01702 Queuine tRNA-ribosyltransferase FDP11_RS21510 PF02547 Queuosine biosynthesis protein FDP11_RS21520 PF00571 CBS domain FDP11_RS21525 PF00463 Isocitrate lyase family FDP11_RS21530 PF01274 Malate synthase FDP11_RS21535 PF03466 LysR substrate binding domain FDP11_RS21535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS21540 PF10417 C-terminal domain of 1-Cys peroxiredoxin FDP11_RS21540 PF00578 AhpC/TSA family FDP11_RS21545 PF03932 CutC family FDP11_RS21550 PF03976 Polyphosphate kinase 2 (PPK2) FDP11_RS21555 PF01895 PhoU domain FDP11_RS21560 PF00005 ABC transporter FDP11_RS21565 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS21570 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS21575 PF13089 Polyphosphate kinase N-terminal domain FDP11_RS21575 PF17941 Polyphosphate kinase C-terminal domain 1 FDP11_RS21575 PF13090 Polyphosphate kinase C-terminal domain 2 FDP11_RS21575 PF02503 Polyphosphate kinase middle domain FDP11_RS21580 PF02541 Ppx/GppA phosphatase family FDP11_RS21585 PF12849 PBP superfamily domain FDP11_RS21590 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS21590 PF11808 Phosphate regulon sensor protein PhoR FDP11_RS21590 PF00989 PAS fold FDP11_RS21590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS21595 PF00072 Response regulator receiver domain FDP11_RS21595 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS21600 PF04381 Putative exonuclease, RdgC FDP11_RS21610 PF00037 4Fe-4S binding domain FDP11_RS21620 PF03411 Penicillin-insensitive murein endopeptidase FDP11_RS21665 PF07724 AAA domain (Cdc48 subfamily) FDP11_RS21665 PF17871 AAA lid domain FDP11_RS21665 PF10431 C-terminal, D2-small domain, of ClpB protein FDP11_RS21665 PF02861 Clp amino terminal domain, pathogenicity island component FDP11_RS21665 PF00004 ATPase family associated with various cellular activities (AAA) FDP11_RS21675 PF00849 RNA pseudouridylate synthase FDP11_RS21675 PF01479 S4 domain FDP11_RS21680 PF13525 Outer membrane lipoprotein FDP11_RS21685 PF01464 Transglycosylase SLT domain FDP11_RS21690 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FDP11_RS21695 PF01817 Chorismate mutase type II FDP11_RS21695 PF00800 Prephenate dehydratase FDP11_RS21700 PF01931 Protein of unknown function DUF84 FDP11_RS21705 PF01371 Trp repressor protein FDP11_RS21710 PF01464 Transglycosylase SLT domain FDP11_RS21710 PF14718 Soluble lytic murein transglycosylase L domain FDP11_RS21715 PF12848 ABC transporter FDP11_RS21715 PF00005 ABC transporter FDP11_RS21720 PF07238 PilZ domain FDP11_RS21725 PF04225 Opacity-associated protein A LysM-like domain FDP11_RS21725 PF01551 Peptidase family M23 FDP11_RS21730 PF02153 Prephenate dehydrogenase FDP11_RS21730 PF01817 Chorismate mutase type II FDP11_RS21735 PF00793 DAHP synthetase I family FDP11_RS21740 PF00933 Glycosyl hydrolase family 3 N terminal domain FDP11_RS21745 PF03702 Anhydro-N-acetylmuramic acid kinase FDP11_RS21750 PF13580 SIS domain FDP11_RS21765 PF02554 Carbon starvation protein CstA FDP11_RS21770 PF07694 5TMR of 5TMR-LYT FDP11_RS21770 PF06580 Histidine kinase FDP11_RS21775 PF04397 LytTr DNA-binding domain FDP11_RS21775 PF00072 Response regulator receiver domain FDP11_RS21780 PF02401 LytB protein FDP11_RS21785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDP11_RS21790 PF01252 Signal peptidase (SPase) II FDP11_RS21795 PF08264 Anticodon-binding domain of tRNA FDP11_RS21795 PF06827 Zinc finger found in FPG and IleRS FDP11_RS21795 PF00133 tRNA synthetases class I (I, L, M and V) FDP11_RS21800 PF06574 FAD synthetase FDP11_RS21800 PF01687 Riboflavin kinase FDP11_RS21805 PF03023 Lipid II flippase MurJ FDP11_RS21810 PF01649 Ribosomal protein S20 FDP11_RS21815 PF01022 Bacterial regulatory protein, arsR family FDP11_RS21820 PF03466 LysR substrate binding domain FDP11_RS21820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS21825 PF02690 Na+/Pi-cotransporter FDP11_RS21835 PF00303 Thymidylate synthase FDP11_RS21840 PF01790 Prolipoprotein diacylglyceryl transferase FDP11_RS21845 PF01925 Sulfite exporter TauE/SafE FDP11_RS21850 PF00391 PEP-utilising enzyme, mobile domain FDP11_RS21850 PF01590 GAF domain FDP11_RS21850 PF02896 PEP-utilising enzyme, TIM barrel domain FDP11_RS21850 PF05524 PEP-utilising enzyme, N-terminal FDP11_RS21855 PF00293 NUDIX domain FDP11_RS21860 PF02976 DNA mismatch repair enzyme MutH FDP11_RS21870 PF00248 Aldo/keto reductase family FDP11_RS21880 PF00158 Sigma-54 interaction domain FDP11_RS21880 PF02954 Bacterial regulatory protein, Fis family FDP11_RS21880 PF00072 Response regulator receiver domain FDP11_RS21885 PF00152 tRNA synthetases class II (D, K and N) FDP11_RS21885 PF01336 OB-fold nucleic acid binding domain FDP11_RS21895 PF01368 DHH family FDP11_RS21895 PF17768 RecJ OB domain FDP11_RS21895 PF02272 DHHA1 domain FDP11_RS21900 PF13098 Thioredoxin-like domain FDP11_RS21900 PF10411 Disulfide bond isomerase protein N-terminus FDP11_RS21905 PF02899 Phage integrase, N-terminal SAM-like domain FDP11_RS21905 PF00589 Phage integrase family FDP11_RS21910 PF00258 Flavodoxin FDP11_RS21915 PF05525 Branched-chain amino acid transport protein FDP11_RS21920 PF05175 Methyltransferase small domain FDP11_RS21925 PF00271 Helicase conserved C-terminal domain FDP11_RS21925 PF00270 DEAD/DEAH box helicase FDP11_RS21930 PF03883 Peroxide stress protein YaaA FDP11_RS21935 PF01235 Sodium:alanine symporter family FDP11_RS21950 PF03167 Uracil DNA glycosylase superfamily FDP11_RS21955 PF01261 Xylose isomerase-like TIM barrel FDP11_RS21960 PF01228 Glycine radical FDP11_RS21965 PF14821 Threonine synthase N terminus FDP11_RS21965 PF00291 Pyridoxal-phosphate dependent enzyme FDP11_RS21970 PF08544 GHMP kinases C terminal FDP11_RS21970 PF00288 GHMP kinases N terminal domain FDP11_RS21975 PF03447 Homoserine dehydrogenase, NAD binding domain FDP11_RS21975 PF01842 ACT domain FDP11_RS21975 PF00696 Amino acid kinase family FDP11_RS21975 PF13840 ACT domain FDP11_RS21975 PF00742 Homoserine dehydrogenase FDP11_RS21985 PF03737 Aldolase/RraA FDP11_RS21995 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS21995 PF00072 Response regulator receiver domain FDP11_RS22005 PF01627 Hpt domain FDP11_RS22005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS22005 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS22005 PF00989 PAS fold FDP11_RS22005 PF00072 Response regulator receiver domain FDP11_RS22005 PF18415 Histidine kinase receptor ArcB trans-membrane domain FDP11_RS22010 PF00360 Phytochrome region FDP11_RS22010 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS22010 PF00563 EAL domain FDP11_RS22010 PF01590 GAF domain FDP11_RS22015 PF16199 Radical_SAM C-terminal domain FDP11_RS22015 PF04055 Radical SAM superfamily FDP11_RS22020 PF01645 Conserved region in glutamate synthase FDP11_RS22020 PF00310 Glutamine amidotransferases class-II FDP11_RS22020 PF01493 GXGXG motif FDP11_RS22020 PF04898 Glutamate synthase central domain FDP11_RS22025 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDP11_RS22025 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS22030 PF00310 Glutamine amidotransferases class-II FDP11_RS22030 PF04898 Glutamate synthase central domain FDP11_RS22030 PF01645 Conserved region in glutamate synthase FDP11_RS22030 PF01493 GXGXG motif FDP11_RS22035 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS22035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FDP11_RS22045 PF01048 Phosphorylase superfamily FDP11_RS22050 PF03186 CobD/Cbib protein FDP11_RS22050 PF17113 Regulatory signalling modulator protein AmpE FDP11_RS22055 PF01497 Periplasmic binding protein FDP11_RS22060 PF03458 UPF0126 domain FDP11_RS22065 PF03466 LysR substrate binding domain FDP11_RS22065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS22080 PF01925 Sulfite exporter TauE/SafE FDP11_RS22095 PF02142 MGS-like domain FDP11_RS22095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FDP11_RS22095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FDP11_RS22100 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FDP11_RS22100 PF00117 Glutamine amidotransferase class-I FDP11_RS22105 PF05173 Dihydrodipicolinate reductase, C-terminus FDP11_RS22105 PF01113 Dihydrodipicolinate reductase, N-terminus FDP11_RS22110 PF00293 NUDIX domain FDP11_RS22115 PF07517 SecA DEAD-like domain FDP11_RS22115 PF01043 SecA preprotein cross-linking domain FDP11_RS22115 PF07516 SecA Wing and Scaffold domain FDP11_RS22115 PF02810 SEC-C motif FDP11_RS22125 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FDP11_RS22130 PF00091 Tubulin/FtsZ family, GTPase domain FDP11_RS22130 PF12327 FtsZ family, C-terminal domain FDP11_RS22135 PF02491 SHS2 domain inserted in FTSA FDP11_RS22140 PF08478 POTRA domain, FtsQ-type FDP11_RS22140 PF03799 Cell division protein FtsQ FDP11_RS22145 PF01225 Mur ligase family, catalytic domain FDP11_RS22145 PF02875 Mur ligase family, glutamate ligase domain FDP11_RS22145 PF08245 Mur ligase middle domain FDP11_RS22150 PF04101 Glycosyltransferase family 28 C-terminal domain FDP11_RS22150 PF03033 Glycosyltransferase family 28 N-terminal domain FDP11_RS22155 PF01098 Cell cycle protein FDP11_RS22160 PF08245 Mur ligase middle domain FDP11_RS22160 PF02875 Mur ligase family, glutamate ligase domain FDP11_RS22165 PF00953 Glycosyl transferase family 4 FDP11_RS22165 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FDP11_RS22170 PF01225 Mur ligase family, catalytic domain FDP11_RS22170 PF02875 Mur ligase family, glutamate ligase domain FDP11_RS22170 PF08245 Mur ligase middle domain FDP11_RS22175 PF08245 Mur ligase middle domain FDP11_RS22175 PF02875 Mur ligase family, glutamate ligase domain FDP11_RS22175 PF01225 Mur ligase family, catalytic domain FDP11_RS22180 PF00905 Penicillin binding protein transpeptidase domain FDP11_RS22180 PF03717 Penicillin-binding Protein dimerisation domain FDP11_RS22185 PF04999 Cell division protein FtsL FDP11_RS22190 PF01795 MraW methylase family FDP11_RS22200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDP11_RS22205 PF04348 LppC putative lipoprotein FDP11_RS22210 PF02021 Uncharacterised protein family UPF0102 FDP11_RS22215 PF13580 SIS domain FDP11_RS22220 PF04972 BON domain FDP11_RS22225 PF04386 Stringent starvation protein B FDP11_RS22230 PF02798 Glutathione S-transferase, N-terminal domain FDP11_RS22230 PF00043 Glutathione S-transferase, C-terminal domain FDP11_RS22235 PF02167 Cytochrome C1 family FDP11_RS22240 PF00032 Cytochrome b(C-terminal)/b6/petD FDP11_RS22240 PF00033 Cytochrome b/b6/petB FDP11_RS22245 PF00355 Rieske [2Fe-2S] domain FDP11_RS22245 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FDP11_RS22250 PF00380 Ribosomal protein S9/S16 FDP11_RS22255 PF00572 Ribosomal protein L13 FDP11_RS22260 PF03969 AFG1-like ATPase FDP11_RS22265 PF06295 Protein of unknown function (DUF1043) FDP11_RS22270 PF00595 PDZ domain FDP11_RS22275 PF13180 PDZ domain FDP11_RS22280 PF00521 DNA gyrase/topoisomerase IV, subunit A FDP11_RS22280 PF03989 DNA gyrase C-terminal domain, beta-propeller FDP11_RS22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS22285 PF01751 Toprim domain FDP11_RS22285 PF00986 DNA gyrase B subunit, carboxyl terminus FDP11_RS22285 PF00204 DNA gyrase B FDP11_RS22290 PF05728 Uncharacterised protein family (UPF0227) FDP11_RS22295 PF00149 Calcineurin-like phosphoesterase FDP11_RS22300 PF06853 Protein of unknown function (DUF1249) FDP11_RS22305 PF00293 NUDIX domain FDP11_RS22310 PF02321 Outer membrane efflux protein FDP11_RS22315 PF00294 pfkB family carbohydrate kinase FDP11_RS22315 PF01467 Cytidylyltransferase-like FDP11_RS22320 PF08335 GlnD PII-uridylyltransferase FDP11_RS22320 PF03710 Glutamate-ammonia ligase adenylyltransferase FDP11_RS22325 PF00672 HAMP domain FDP11_RS22325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS22335 PF01928 CYTH domain FDP11_RS22340 PF01865 Protein of unknown function DUF47 FDP11_RS22345 PF01384 Phosphate transporter family FDP11_RS22350 PF08239 Bacterial SH3 domain FDP11_RS22360 PF13401 AAA domain FDP11_RS22360 PF01471 Putative peptidoglycan binding domain FDP11_RS22365 PF01966 HD domain FDP11_RS22365 PF01743 Poly A polymerase head domain FDP11_RS22365 PF12627 Probable RNA and SrmB- binding site of polymerase A FDP11_RS22370 PF02673 Bacitracin resistance protein BacA FDP11_RS22375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FDP11_RS22380 PF02152 Dihydroneopterin aldolase FDP11_RS22385 PF02660 Glycerol-3-phosphate acyltransferase FDP11_RS22390 PF12697 Alpha/beta hydrolase family FDP11_RS22395 PF00814 Glycoprotease family FDP11_RS22400 PF01165 Ribosomal protein S21 FDP11_RS22405 PF09424 Yqey-like protein FDP11_RS22410 PF10410 DnaB-helicase binding domain of primase FDP11_RS22410 PF01807 CHC2 zinc finger FDP11_RS22410 PF08275 DNA primase catalytic core, N-terminal domain FDP11_RS22410 PF08278 DNA primase DnaG DnaB-binding FDP11_RS22415 PF04545 Sigma-70, region 4 FDP11_RS22415 PF00140 Sigma-70 factor, region 1.2 FDP11_RS22415 PF03979 Sigma-70 factor, region 1.1 FDP11_RS22415 PF04546 Sigma-70, non-essential region FDP11_RS22415 PF04542 Sigma-70 region 2 FDP11_RS22415 PF04539 Sigma-70 region 3 FDP11_RS22425 PF13356 Arm DNA-binding domain FDP11_RS22425 PF00589 Phage integrase family FDP11_RS22440 PF13581 Histidine kinase-like ATPase domain FDP11_RS22460 PF04002 RadC-like JAB domain FDP11_RS22500 PF00075 RNase H FDP11_RS22530 PF03180 NLPA lipoprotein FDP11_RS22560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FDP11_RS22560 PF02378 Phosphotransferase system, EIIC FDP11_RS22560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FDP11_RS22565 PF08125 Mannitol dehydrogenase C-terminal domain FDP11_RS22565 PF01232 Mannitol dehydrogenase Rossmann domain FDP11_RS22570 PF05068 Mannitol repressor FDP11_RS22575 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS22580 PF00672 HAMP domain FDP11_RS22580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS22580 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS22585 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS22585 PF00072 Response regulator receiver domain FDP11_RS22595 PF01380 SIS domain FDP11_RS22600 PF08220 DeoR-like helix-turn-helix domain FDP11_RS22600 PF00455 DeoR C terminal sensor domain FDP11_RS22605 PF00224 Pyruvate kinase, barrel domain FDP11_RS22605 PF02887 Pyruvate kinase, alpha/beta domain FDP11_RS22615 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS22615 PF07694 5TMR of 5TMR-LYT FDP11_RS22620 PF10369 Small subunit of acetolactate synthase FDP11_RS22625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDP11_RS22625 PF00205 Thiamine pyrophosphate enzyme, central domain FDP11_RS22625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDP11_RS22630 PF00501 AMP-binding enzyme FDP11_RS22635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS22635 PF03466 LysR substrate binding domain FDP11_RS22645 PF01569 PAP2 superfamily FDP11_RS22655 PF00682 HMGL-like FDP11_RS22655 PF08502 LeuA allosteric (dimerisation) domain FDP11_RS22660 PF00180 Isocitrate/isopropylmalate dehydrogenase FDP11_RS22665 PF00330 Aconitase family (aconitate hydratase) FDP11_RS22670 PF00694 Aconitase C-terminal domain FDP11_RS22680 PF05099 Tellurite resistance protein TerB FDP11_RS22680 PF00226 DnaJ domain FDP11_RS22685 PF03968 OstA-like protein FDP11_RS22685 PF04453 LPS transport system D FDP11_RS22690 PF09312 SurA N-terminal domain FDP11_RS22695 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FDP11_RS22700 PF00398 Ribosomal RNA adenine dimethylase FDP11_RS22705 PF04379 ApaG domain FDP11_RS22710 PF00149 Calcineurin-like phosphoesterase FDP11_RS22715 PF00186 Dihydrofolate reductase FDP11_RS22720 PF12821 Threonine/Serine exporter, ThrE FDP11_RS22725 PF06738 Putative threonine/serine exporter FDP11_RS22730 PF01018 GTP1/OBG FDP11_RS22730 PF01926 50S ribosome-binding GTPase FDP11_RS22735 PF01016 Ribosomal L27 protein FDP11_RS22740 PF00829 Ribosomal prokaryotic L21 protein FDP11_RS22745 PF00348 Polyprenyl synthetase FDP11_RS22755 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FDP11_RS22755 PF00056 lactate/malate dehydrogenase, NAD binding domain FDP11_RS22760 PF01316 Arginine repressor, DNA binding domain FDP11_RS22760 PF02863 Arginine repressor, C-terminal domain FDP11_RS22765 PF16868 NMT1-like family FDP11_RS22780 PF00005 ABC transporter FDP11_RS22785 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS22795 PF02441 Flavoprotein FDP11_RS22800 PF08245 Mur ligase middle domain FDP11_RS22800 PF02875 Mur ligase family, glutamate ligase domain FDP11_RS22800 PF01225 Mur ligase family, catalytic domain FDP11_RS22805 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FDP11_RS22810 PF00719 Inorganic pyrophosphatase FDP11_RS22820 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FDP11_RS22825 PF04357 TamB, inner membrane protein subunit of TAM complex FDP11_RS22830 PF17243 POTRA domain TamA domain 1 FDP11_RS22830 PF01103 Surface antigen FDP11_RS22835 PF01625 Peptide methionine sulfoxide reductase FDP11_RS22840 PF06526 Protein of unknown function (DUF1107) FDP11_RS22845 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FDP11_RS22850 PF10795 Protein of unknown function (DUF2607) FDP11_RS22860 PF00005 ABC transporter FDP11_RS22885 PF03600 Citrate transporter FDP11_RS22885 PF02080 TrkA-C domain FDP11_RS22890 PF00009 Elongation factor Tu GTP binding domain FDP11_RS22895 PF01507 Phosphoadenosine phosphosulfate reductase family FDP11_RS22900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FDP11_RS22900 PF14824 Sirohaem biosynthesis protein central FDP11_RS22900 PF10414 Sirohaem synthase dimerisation region FDP11_RS22905 PF02872 5'-nucleotidase, C-terminal domain FDP11_RS22905 PF00149 Calcineurin-like phosphoesterase FDP11_RS22915 PF00271 Helicase conserved C-terminal domain FDP11_RS22915 PF00270 DEAD/DEAH box helicase FDP11_RS22915 PF03880 DbpA RNA binding domain FDP11_RS22920 PF13673 Acetyltransferase (GNAT) domain FDP11_RS22930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FDP11_RS22930 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FDP11_RS22940 PF01196 Ribosomal protein L17 FDP11_RS22945 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FDP11_RS22945 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FDP11_RS22945 PF01000 RNA polymerase Rpb3/RpoA insert domain FDP11_RS22950 PF00163 Ribosomal protein S4/S9 N-terminal domain FDP11_RS22950 PF01479 S4 domain FDP11_RS22955 PF00411 Ribosomal protein S11 FDP11_RS22960 PF00416 Ribosomal protein S13/S18 FDP11_RS22965 PF00444 Ribosomal protein L36 FDP11_RS22970 PF00344 SecY translocase FDP11_RS22975 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FDP11_RS22980 PF00327 Ribosomal protein L30p/L7e FDP11_RS22985 PF00333 Ribosomal protein S5, N-terminal domain FDP11_RS22985 PF03719 Ribosomal protein S5, C-terminal domain FDP11_RS22990 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FDP11_RS22995 PF00347 Ribosomal protein L6 FDP11_RS23000 PF00410 Ribosomal protein S8 FDP11_RS23005 PF00253 Ribosomal protein S14p/S29e FDP11_RS23010 PF00673 ribosomal L5P family C-terminus FDP11_RS23010 PF00281 Ribosomal protein L5 FDP11_RS23015 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FDP11_RS23015 PF00467 KOW motif FDP11_RS23020 PF00238 Ribosomal protein L14p/L23e FDP11_RS23025 PF00366 Ribosomal protein S17 FDP11_RS23030 PF00831 Ribosomal L29 protein FDP11_RS23035 PF00252 Ribosomal protein L16p/L10e FDP11_RS23040 PF07650 KH domain FDP11_RS23040 PF00189 Ribosomal protein S3, C-terminal domain FDP11_RS23045 PF00237 Ribosomal protein L22p/L17e FDP11_RS23050 PF00203 Ribosomal protein S19 FDP11_RS23055 PF00181 Ribosomal Proteins L2, RNA binding domain FDP11_RS23055 PF03947 Ribosomal Proteins L2, C-terminal domain FDP11_RS23060 PF00276 Ribosomal protein L23 FDP11_RS23065 PF00573 Ribosomal protein L4/L1 family FDP11_RS23070 PF00297 Ribosomal protein L3 FDP11_RS23075 PF00338 Ribosomal protein S10p/S20e FDP11_RS23080 PF01197 Ribosomal protein L31 FDP11_RS23085 PF00270 DEAD/DEAH box helicase FDP11_RS23085 PF00271 Helicase conserved C-terminal domain FDP11_RS23085 PF17764 3′ DNA-binding domain (3′BD) FDP11_RS23085 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FDP11_RS23085 PF18074 Primosomal protein N C-terminal domain FDP11_RS23090 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS23100 PF00227 Proteasome subunit FDP11_RS23105 PF07724 AAA domain (Cdc48 subfamily) FDP11_RS23105 PF00004 ATPase family associated with various cellular activities (AAA) FDP11_RS23110 PF01040 UbiA prenyltransferase family FDP11_RS23115 PF03737 Aldolase/RraA FDP11_RS23120 PF06005 Cell division protein ZapB FDP11_RS23125 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FDP11_RS23130 PF00455 DeoR C terminal sensor domain FDP11_RS23130 PF08220 DeoR-like helix-turn-helix domain FDP11_RS23150 PF00121 Triosephosphate isomerase FDP11_RS23155 PF00483 Nucleotidyl transferase FDP11_RS23160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FDP11_RS23160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FDP11_RS23160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FDP11_RS23175 PF00535 Glycosyl transferase family 2 FDP11_RS23185 PF03600 Citrate transporter FDP11_RS23185 PF02080 TrkA-C domain FDP11_RS23215 PF00535 Glycosyl transferase family 2 FDP11_RS23225 PF00293 NUDIX domain FDP11_RS23230 PF01370 NAD dependent epimerase/dehydratase family FDP11_RS23235 PF16363 GDP-mannose 4,6 dehydratase FDP11_RS23240 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS23245 PF05159 Capsule polysaccharide biosynthesis protein FDP11_RS23250 PF01380 SIS domain FDP11_RS23250 PF00571 CBS domain FDP11_RS23255 PF02348 Cytidylyltransferase FDP11_RS23260 PF00793 DAHP synthetase I family FDP11_RS23285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FDP11_RS23285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FDP11_RS23285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FDP11_RS23285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FDP11_RS23290 PF00483 Nucleotidyl transferase FDP11_RS23290 PF01050 Mannose-6-phosphate isomerase FDP11_RS23300 PF16363 GDP-mannose 4,6 dehydratase FDP11_RS23305 PF04321 RmlD substrate binding domain FDP11_RS23310 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FDP11_RS23315 PF00483 Nucleotidyl transferase FDP11_RS23325 PF00005 ABC transporter FDP11_RS23330 PF01061 ABC-2 type transporter FDP11_RS23335 PF10531 SLBB domain FDP11_RS23335 PF02563 Polysaccharide biosynthesis/export protein FDP11_RS23340 PF00953 Glycosyl transferase family 4 FDP11_RS23350 PF00263 Bacterial type II and III secretion system protein FDP11_RS23350 PF03958 Bacterial type II/III secretion system short domain FDP11_RS23370 PF03934 Type II secretion system (T2SS), protein K FDP11_RS23385 PF07963 Prokaryotic N-terminal methylation motif FDP11_RS23385 PF08334 Type II secretion system (T2SS), protein G FDP11_RS23390 PF00482 Type II secretion system (T2SS), protein F FDP11_RS23395 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FDP11_RS23395 PF00437 Type II/IV secretion system protein FDP11_RS23400 PF08334 Type II secretion system (T2SS), protein G FDP11_RS23400 PF07963 Prokaryotic N-terminal methylation motif FDP11_RS23410 PF01507 Phosphoadenosine phosphosulfate reductase family FDP11_RS23425 PF00009 Elongation factor Tu GTP binding domain FDP11_RS23430 PF00953 Glycosyl transferase family 4 FDP11_RS23440 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FDP11_RS23450 PF06082 Exopolysaccharide biosynthesis protein YbjH FDP11_RS23455 PF01370 NAD dependent epimerase/dehydratase family FDP11_RS23460 PF03279 Bacterial lipid A biosynthesis acyltransferase FDP11_RS23465 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FDP11_RS23470 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FDP11_RS23480 PF02348 Cytidylyltransferase FDP11_RS23485 PF00483 Nucleotidyl transferase FDP11_RS23495 PF08666 SAF domain FDP11_RS23495 PF03102 NeuB family FDP11_RS23500 PF02350 UDP-N-acetylglucosamine 2-epimerase FDP11_RS23505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FDP11_RS23510 PF02719 Polysaccharide biosynthesis protein FDP11_RS23515 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS23530 PF00884 Sulfatase FDP11_RS23530 PF11893 Domain of unknown function (DUF3413) FDP11_RS23540 PF01219 Prokaryotic diacylglycerol kinase FDP11_RS23545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FDP11_RS23550 PF00535 Glycosyl transferase family 2 FDP11_RS23555 PF00534 Glycosyl transferases group 1 FDP11_RS23560 PF01467 Cytidylyltransferase-like FDP11_RS23570 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FDP11_RS23570 PF06827 Zinc finger found in FPG and IleRS FDP11_RS23570 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FDP11_RS23580 PF00471 Ribosomal protein L33 FDP11_RS23585 PF00830 Ribosomal L28 family FDP11_RS23590 PF04002 RadC-like JAB domain FDP11_RS23595 PF00672 HAMP domain FDP11_RS23595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FDP11_RS23595 PF17200 Single Cache domain 2 FDP11_RS23600 PF04127 DNA / pantothenate metabolism flavoprotein FDP11_RS23600 PF02441 Flavoprotein FDP11_RS23605 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS23610 PF03279 Bacterial lipid A biosynthesis acyltransferase FDP11_RS23615 PF00156 Phosphoribosyl transferase domain FDP11_RS23620 PF03725 3' exoribonuclease family, domain 2 FDP11_RS23620 PF01138 3' exoribonuclease family, domain 1 FDP11_RS23625 PF08340 Domain of unknown function (DUF1732) FDP11_RS23625 PF03755 YicC-like family, N-terminal region FDP11_RS23635 PF00005 ABC transporter FDP11_RS23635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS23640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS23640 PF00005 ABC transporter FDP11_RS23645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS23650 PF12911 N-terminal TM domain of oligopeptide transport permease C FDP11_RS23650 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS23655 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS23660 PF07715 TonB-dependent Receptor Plug Domain FDP11_RS23660 PF00593 TonB dependent receptor FDP11_RS23675 PF01618 MotA/TolQ/ExbB proton channel family FDP11_RS23680 PF02472 Biopolymer transport protein ExbD/TolR FDP11_RS23695 PF00625 Guanylate kinase FDP11_RS23700 PF01192 RNA polymerase Rpb6 FDP11_RS23705 PF13291 ACT domain FDP11_RS23705 PF04607 Region found in RelA / SpoT proteins FDP11_RS23705 PF02824 TGS domain FDP11_RS23710 PF00588 SpoU rRNA Methylase family FDP11_RS23710 PF12105 SpoU, rRNA methylase, C-terminal FDP11_RS23715 PF00270 DEAD/DEAH box helicase FDP11_RS23715 PF17191 RecG wedge domain FDP11_RS23715 PF00271 Helicase conserved C-terminal domain FDP11_RS23720 PF00860 Permease family FDP11_RS23725 PF00672 HAMP domain FDP11_RS23725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS23725 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS23730 PF00072 Response regulator receiver domain FDP11_RS23730 PF00486 Transcriptional regulatory protein, C terminal FDP11_RS23740 PF01272 Transcription elongation factor, GreA/GreB, C-term FDP11_RS23740 PF03449 Transcription elongation factor, N-terminal FDP11_RS23750 PF00575 S1 RNA binding domain FDP11_RS23750 PF17674 HHH domain FDP11_RS23750 PF09371 Tex-like protein N-terminal domain FDP11_RS23750 PF16921 Tex protein YqgF-like domain FDP11_RS23760 PF00561 alpha/beta hydrolase fold FDP11_RS23765 PF00156 Phosphoribosyl transferase domain FDP11_RS23770 PF01521 Iron-sulphur cluster biosynthesis FDP11_RS23770 PF01106 NifU-like domain FDP11_RS23775 PF00293 NUDIX domain FDP11_RS23780 PF00459 Inositol monophosphatase family FDP11_RS23785 PF01203 Type II secretion system (T2SS), protein N FDP11_RS23790 PF04612 Type II secretion system (T2SS), protein M FDP11_RS23795 PF05134 Type II secretion system (T2SS), protein L FDP11_RS23795 PF12693 GspL periplasmic domain FDP11_RS23800 PF03934 Type II secretion system (T2SS), protein K FDP11_RS23805 PF07963 Prokaryotic N-terminal methylation motif FDP11_RS23805 PF11612 Type II secretion system (T2SS), protein J FDP11_RS23810 PF07963 Prokaryotic N-terminal methylation motif FDP11_RS23810 PF02501 Type II secretion system (T2SS), protein I FDP11_RS23815 PF12019 Type II transport protein GspH FDP11_RS23820 PF08334 Type II secretion system (T2SS), protein G FDP11_RS23820 PF07963 Prokaryotic N-terminal methylation motif FDP11_RS23825 PF00482 Type II secretion system (T2SS), protein F FDP11_RS23830 PF00437 Type II/IV secretion system protein FDP11_RS23835 PF00263 Bacterial type II and III secretion system protein FDP11_RS23835 PF03958 Bacterial type II/III secretion system short domain FDP11_RS23840 PF11356 Type II secretion system protein C FDP11_RS23845 PF01479 S4 domain FDP11_RS23850 PF01430 Hsp33 protein FDP11_RS23855 PF01293 Phosphoenolpyruvate carboxykinase FDP11_RS23865 PF00583 Acetyltransferase (GNAT) family FDP11_RS23865 PF09500 Putative thioesterase (yiiD_Cterm) FDP11_RS23870 PF02580 D-Tyr-tRNA(Tyr) deacylase FDP11_RS23875 PF03631 Virulence factor BrkB FDP11_RS23895 PF03951 Glutamine synthetase, beta-Grasp domain FDP11_RS23895 PF00120 Glutamine synthetase, catalytic domain FDP11_RS23905 PF00989 PAS fold FDP11_RS23905 PF00512 His Kinase A (phospho-acceptor) domain FDP11_RS23905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS23910 PF00072 Response regulator receiver domain FDP11_RS23910 PF02954 Bacterial regulatory protein, Fis family FDP11_RS23910 PF00158 Sigma-54 interaction domain FDP11_RS23915 PF00563 EAL domain FDP11_RS23915 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS23915 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS23920 PF00962 Adenosine/AMP deaminase FDP11_RS23925 PF04055 Radical SAM superfamily FDP11_RS23925 PF06969 HemN C-terminal domain FDP11_RS23930 PF10675 Protein of unknown function (DUF2489) FDP11_RS23935 PF04220 Der GTPase activator (YihI) FDP11_RS23950 PF00034 Cytochrome c FDP11_RS23955 PF01926 50S ribosome-binding GTPase FDP11_RS23960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FDP11_RS23960 PF01367 5'-3' exonuclease, C-terminal SAM fold FDP11_RS23960 PF01612 3'-5' exonuclease FDP11_RS23960 PF00476 DNA polymerase family A FDP11_RS23970 PF00490 Delta-aminolevulinic acid dehydratase FDP11_RS23975 PF01026 TatD related DNase FDP11_RS23980 PF00902 Sec-independent protein translocase protein (TatC) FDP11_RS23985 PF02416 mttA/Hcf106 family FDP11_RS23990 PF02416 mttA/Hcf106 family FDP11_RS23995 PF03109 ABC1 family FDP11_RS24000 PF02036 SCP-2 sterol transfer family FDP11_RS24005 PF01209 ubiE/COQ5 methyltransferase family FDP11_RS24010 PF02646 RmuC family FDP11_RS24020 PF03707 Bacterial signalling protein N terminal repeat FDP11_RS24020 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS24020 PF00563 EAL domain FDP11_RS24025 PF01594 AI-2E family transporter FDP11_RS24080 PF00158 Sigma-54 interaction domain FDP11_RS24080 PF02954 Bacterial regulatory protein, Fis family FDP11_RS24080 PF01590 GAF domain FDP11_RS24090 PF10625 Universal stress protein B (UspB) FDP11_RS24095 PF00210 Ferritin-like domain FDP11_RS24100 PF00582 Universal stress protein family FDP11_RS24105 PF00892 EamA-like transporter family FDP11_RS24115 PF04445 Putative SAM-dependent methyltransferase FDP11_RS24120 PF00563 EAL domain FDP11_RS24120 PF08448 PAS fold FDP11_RS24120 PF00990 Diguanylate cyclase, GGDEF domain FDP11_RS24125 PF01037 Lrp/AsnC ligand binding domain FDP11_RS24130 PF01432 Peptidase family M3 FDP11_RS24135 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FDP11_RS24140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FDP11_RS24140 PF07992 Pyridine nucleotide-disulphide oxidoreductase FDP11_RS24145 PF03466 LysR substrate binding domain FDP11_RS24145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS24150 PF01048 Phosphorylase superfamily FDP11_RS24155 PF01081 KDPG and KHG aldolase FDP11_RS24160 PF02447 GntP family permease FDP11_RS24165 PF01202 Shikimate kinase FDP11_RS24170 PF00920 Dehydratase family FDP11_RS24175 PF00893 Small Multidrug Resistance protein FDP11_RS24180 PF00893 Small Multidrug Resistance protein FDP11_RS24185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS24185 PF03466 LysR substrate binding domain FDP11_RS24190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FDP11_RS24190 PF00356 Bacterial regulatory proteins, lacI family FDP11_RS24195 PF00069 Protein kinase domain FDP11_RS24225 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS24225 PF12911 N-terminal TM domain of oligopeptide transport permease C FDP11_RS24235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FDP11_RS24240 PF00005 ABC transporter FDP11_RS24240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FDP11_RS24245 PF13419 Haloacid dehalogenase-like hydrolase FDP11_RS24275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FDP11_RS24280 PF00580 UvrD/REP helicase N-terminal domain FDP11_RS24280 PF13361 UvrD-like helicase C-terminal domain FDP11_RS24285 PF00440 Bacterial regulatory proteins, tetR family FDP11_RS24285 PF16295 Tetracyclin repressor-like, C-terminal domain FDP11_RS24290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FDP11_RS24295 PF00873 AcrB/AcrD/AcrF family FDP11_RS24300 PF04380 Membrane fusogenic activity FDP11_RS24305 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FDP11_RS24305 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FDP11_RS24310 PF03466 LysR substrate binding domain FDP11_RS24310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS24345 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS24350 PF07369 Protein of unknown function (DUF1488) FDP11_RS24355 PF01488 Shikimate / quinate 5-dehydrogenase FDP11_RS24355 PF08501 Shikimate dehydrogenase substrate binding domain FDP11_RS24355 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FDP11_RS24360 PF01218 Coproporphyrinogen III oxidase FDP11_RS24365 PF01300 Telomere recombination FDP11_RS24370 PF00731 AIR carboxylase FDP11_RS24375 PF02222 ATP-grasp domain FDP11_RS24375 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FDP11_RS24380 PF01396 Topoisomerase DNA binding C4 zinc finger FDP11_RS24385 PF04361 Protein of unknown function (DUF494) FDP11_RS24390 PF17782 DprA winged helix domain FDP11_RS24390 PF02481 DNA recombination-mediator protein A FDP11_RS24400 PF01327 Polypeptide deformylase FDP11_RS24405 PF00551 Formyl transferase FDP11_RS24405 PF02911 Formyl transferase, C-terminal domain FDP11_RS24410 PF01189 16S rRNA methyltransferase RsmB/F FDP11_RS24410 PF01029 NusB family FDP11_RS24415 PF02254 TrkA-N domain FDP11_RS24415 PF02080 TrkA-C domain FDP11_RS24420 PF02386 Cation transport protein FDP11_RS24430 PF03006 Haemolysin-III related FDP11_RS24435 PF07070 SpoOM protein FDP11_RS24445 PF06288 Protein of unknown function (DUF1040) FDP11_RS24450 PF12801 4Fe-4S binding domain FDP11_RS24450 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FDP11_RS24450 PF13746 4Fe-4S dicluster domain FDP11_RS24455 PF01636 Phosphotransferase enzyme family FDP11_RS24460 PF01323 DSBA-like thioredoxin domain FDP11_RS24465 PF01553 Acyltransferase FDP11_RS24475 PF13335 Magnesium chelatase, subunit ChlI C-terminal FDP11_RS24475 PF01078 Magnesium chelatase, subunit ChlI FDP11_RS24480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FDP11_RS24480 PF00205 Thiamine pyrophosphate enzyme, central domain FDP11_RS24480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FDP11_RS24490 PF01063 Amino-transferase class IV FDP11_RS24495 PF00920 Dehydratase family FDP11_RS24500 PF00585 C-terminal regulatory domain of Threonine dehydratase FDP11_RS24500 PF00291 Pyridoxal-phosphate dependent enzyme FDP11_RS24505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS24505 PF03466 LysR substrate binding domain FDP11_RS24510 PF07690 Major Facilitator Superfamily FDP11_RS24515 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS24520 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS24525 PF12804 MobA-like NTP transferase domain FDP11_RS24525 PF00132 Bacterial transferase hexapeptide (six repeats) FDP11_RS24530 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FDP11_RS24530 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FDP11_RS24535 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDP11_RS24535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDP11_RS24540 PF00231 ATP synthase FDP11_RS24545 PF00306 ATP synthase alpha/beta chain, C terminal domain FDP11_RS24545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDP11_RS24545 PF02874 ATP synthase alpha/beta family, beta-barrel domain FDP11_RS24550 PF00213 ATP synthase delta (OSCP) subunit FDP11_RS24555 PF00430 ATP synthase B/B' CF(0) FDP11_RS24560 PF00137 ATP synthase subunit C FDP11_RS24565 PF00119 ATP synthase A chain FDP11_RS24570 PF03899 ATP synthase I chain FDP11_RS24575 PF17762 HTH domain found in ParB protein FDP11_RS24575 PF02195 ParB-like nuclease domain FDP11_RS24580 PF13614 AAA domain FDP11_RS24585 PF02527 rRNA small subunit methyltransferase G FDP11_RS24590 PF01134 Glucose inhibited division protein A FDP11_RS24590 PF13932 GidA associated domain FDP11_RS24595 PF00258 Flavodoxin FDP11_RS24600 PF12631 MnmE helical domain FDP11_RS24600 PF10396 GTP-binding protein TrmE N-terminus FDP11_RS24600 PF01926 50S ribosome-binding GTPase FDP11_RS24605 PF02096 60Kd inner membrane protein FDP11_RS24605 PF14849 YidC periplasmic domain FDP11_RS24610 PF01809 Putative membrane protein insertion efficiency factor FDP11_RS24615 PF00825 Ribonuclease P FDP11_RS24620 PF00468 Ribosomal protein L34 FDP11_RS24625 PF00005 ABC transporter FDP11_RS24630 PF00528 Binding-protein-dependent transport system inner membrane component FDP11_RS24635 PF00497 Bacterial extracellular solute-binding proteins, family 3 FDP11_RS24640 PF11638 DnaA N-terminal domain FDP11_RS24640 PF00308 Bacterial dnaA protein FDP11_RS24640 PF08299 Bacterial dnaA protein helix-turn-helix FDP11_RS24645 PF00712 DNA polymerase III beta subunit, N-terminal domain FDP11_RS24645 PF02768 DNA polymerase III beta subunit, C-terminal domain FDP11_RS24645 PF02767 DNA polymerase III beta subunit, central domain FDP11_RS24650 PF02463 RecF/RecN/SMC N terminal domain FDP11_RS24655 PF00204 DNA gyrase B FDP11_RS24655 PF00986 DNA gyrase B subunit, carboxyl terminus FDP11_RS24655 PF18053 DNA gyrase B subunit insert domain FDP11_RS24655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FDP11_RS24655 PF01751 Toprim domain FDP11_RS24665 PF00011 Hsp20/alpha crystallin family FDP11_RS24670 PF00155 Aminotransferase class I and II FDP11_RS24675 PF00128 Alpha amylase, catalytic domain FDP11_RS24680 PF05746 DALR anticodon binding domain FDP11_RS24680 PF02092 Glycyl-tRNA synthetase beta subunit FDP11_RS24685 PF02091 Glycyl-tRNA synthetase alpha subunit FDP11_RS24690 PF01169 Uncharacterized protein family UPF0016 FDP11_RS24700 PF01206 Sulfurtransferase TusA FDP11_RS24710 PF03466 LysR substrate binding domain FDP11_RS24710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS24715 PF00107 Zinc-binding dehydrogenase FDP11_RS24715 PF08240 Alcohol dehydrogenase GroES-like domain FDP11_RS24720 PF00108 Thiolase, N-terminal domain FDP11_RS24720 PF02803 Thiolase, C-terminal domain FDP11_RS24725 PF00378 Enoyl-CoA hydratase/isomerase FDP11_RS24725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FDP11_RS24725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FDP11_RS24730 PF01205 Uncharacterized protein family UPF0029 FDP11_RS24730 PF09186 Domain of unknown function (DUF1949) FDP11_RS24735 PF02386 Cation transport protein FDP11_RS24740 PF12724 Flavodoxin domain FDP11_RS24785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FDP11_RS24790 PF01964 Radical SAM ThiC family FDP11_RS24790 PF13667 ThiC-associated domain FDP11_RS24795 PF02581 Thiamine monophosphate synthase FDP11_RS24800 PF00899 ThiF family FDP11_RS24805 PF02597 ThiS family FDP11_RS24810 PF05690 Thiazole biosynthesis protein ThiG FDP11_RS24815 PF04055 Radical SAM superfamily FDP11_RS24815 PF06968 Biotin and Thiamin Synthesis associated domain FDP11_RS24820 PF00557 Metallopeptidase family M24 FDP11_RS24820 PF01321 Creatinase/Prolidase N-terminal domain FDP11_RS24820 PF01321 Creatinase/Prolidase N-terminal domain FDP11_RS24820 PF00557 Metallopeptidase family M24 FDP11_RS24825 PF03466 LysR substrate binding domain FDP11_RS24825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FDP11_RS24830 PF07690 Major Facilitator Superfamily FDP11_RS24850 PF05114 Protein of unknown function (DUF692) FDP11_RS24860 PF13361 UvrD-like helicase C-terminal domain FDP11_RS24860 PF00580 UvrD/REP helicase N-terminal domain FDP11_RS24870 PF01810 LysE type translocator FDP11_RS24880 PF00892 EamA-like transporter family FDP11_RS24885 PF09382 RQC domain FDP11_RS24885 PF16124 RecQ zinc-binding FDP11_RS24885 PF00570 HRDC domain FDP11_RS24885 PF00271 Helicase conserved C-terminal domain FDP11_RS24885 PF00270 DEAD/DEAH box helicase FDP11_RS24895 PF02592 Putative vitamin uptake transporter FDP11_RS24900 PF02541 Ppx/GppA phosphatase family FDP11_RS24905 PF00270 DEAD/DEAH box helicase FDP11_RS24905 PF00271 Helicase conserved C-terminal domain FDP11_RS24910 PF00085 Thioredoxin FDP11_RS24915 PF07497 Rho termination factor, RNA-binding domain FDP11_RS24915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FDP11_RS24915 PF07498 Rho termination factor, N-terminal domain FDP11_RS24925 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FDP11_RS24930 PF00111 2Fe-2S iron-sulfur cluster binding domain FDP11_RS24935 PF00175 Oxidoreductase NAD-binding domain FDP11_RS24975 PF07219 HemY protein N-terminus FDP11_RS24980 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FDP11_RS24985 PF02602 Uroporphyrinogen-III synthase HemD FDP11_RS24990 PF03900 Porphobilinogen deaminase, C-terminal domain FDP11_RS24990 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FDP11_RS24995 PF01295 Adenylate cyclase, class-I FDP11_RS24995 PF12633 Adenylate cyclase NT domain FDP11_RS25000 PF01491 Frataxin-like domain FDP11_RS25010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FDP11_RS25010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FDP11_RS25015 PF01678 Diaminopimelate epimerase