VP1642 0b8d37b0adb50f0d672497ef0330c151 516 Pfam PF02839 Carbohydrate binding domain 391 432 1.2E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 SUPERFAMILY SSF51055 387 436 6.67E-15 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 2.0E-11 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 2.0E-11 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 2.0E-11 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 Gene3D G3DSA:2.10.10.20 388 435 2.5E-18 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 SMART SM00020 33 260 2.7E-61 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 Gene3D G3DSA:2.40.10.10 31 115 4.2E-22 T 22-04-2016 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 Gene3D G3DSA:2.40.10.10 161 254 7.7E-32 T 22-04-2016 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 SUPERFAMILY SSF50494 15 265 6.21E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan VP1642 0b8d37b0adb50f0d672497ef0330c151 516 Gene3D G3DSA:2.60.40.360 283 359 8.7E-5 T 22-04-2016 IPR008962 PapD-like VP1642 0b8d37b0adb50f0d672497ef0330c151 516 Gene3D G3DSA:2.40.10.10 116 160 1.5E-9 T 22-04-2016 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 PANTHER PTHR24276 1 265 7.9E-73 T 22-04-2016 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 Gene3D G3DSA:2.10.10.20 464 486 8.6E-4 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 SMART SM00495 461 512 0.0024 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 SMART SM00495 390 435 1.3E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP1642 0b8d37b0adb50f0d672497ef0330c151 516 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VP1642 0b8d37b0adb50f0d672497ef0330c151 516 Pfam PF00089 Trypsin 34 258 2.3E-47 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 PANTHER PTHR30244 225 397 8.9E-91 T 22-04-2016 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.0E-12 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 Gene3D G3DSA:1.20.1330.10 57 170 1.7E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 Gene3D G3DSA:1.20.1330.10 302 355 1.7E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 PANTHER PTHR30244 3 187 8.9E-91 T 22-04-2016 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 3.5E-94 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 SUPERFAMILY SSF64518 3 397 2.22E-68 T 22-04-2016 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 PANTHER PTHR30244:SF5 3 187 8.9E-91 T 22-04-2016 VP0786 a5d32326172fe09cd854f5dd3895b20b 397 PANTHER PTHR30244:SF5 225 397 8.9E-91 T 22-04-2016 VP2464 9d88e9f77e94e95164838a9820b9da20 209 Gene3D G3DSA:3.40.50.150 1 208 6.2E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2464 9d88e9f77e94e95164838a9820b9da20 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 4.6E-57 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VP2464 9d88e9f77e94e95164838a9820b9da20 209 PANTHER PTHR10920 1 209 4.0E-135 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VP2464 9d88e9f77e94e95164838a9820b9da20 209 PANTHER PTHR10920:SF20 1 209 4.0E-135 T 22-04-2016 VP2464 9d88e9f77e94e95164838a9820b9da20 209 SUPERFAMILY SSF53335 30 209 1.43E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2464 9d88e9f77e94e95164838a9820b9da20 209 PIRSF PIRSF005461 1 209 1.2E-79 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VP2464 9d88e9f77e94e95164838a9820b9da20 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 29.46 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Gene3D G3DSA:3.10.560.10 393 459 8.4E-12 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Gene3D G3DSA:3.10.560.10 209 288 4.1E-14 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Gene3D G3DSA:3.10.560.10 488 576 4.4E-15 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Gene3D G3DSA:3.10.560.10 585 671 8.7E-16 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Gene3D G3DSA:3.10.560.10 95 181 6.0E-15 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Gene3D G3DSA:3.10.560.10 297 378 1.4E-13 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Gene3D G3DSA:3.30.1950.10 32 91 1.6E-9 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 PANTHER PTHR33619:SF1 493 656 1.2E-33 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 PANTHER PTHR33619:SF1 1 92 1.2E-33 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 PANTHER PTHR33619:SF1 201 470 1.2E-33 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 27 91 3.0E-10 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VP1474 e2b6312e00332fb925da2e5beb10b416 700 PANTHER PTHR33619 493 656 1.2E-33 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 PANTHER PTHR33619 1 92 1.2E-33 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 PANTHER PTHR33619 201 470 1.2E-33 T 22-04-2016 VP1474 e2b6312e00332fb925da2e5beb10b416 700 Pfam PF10531 SLBB domain 105 151 2.6E-4 T 22-04-2016 IPR019554 Soluble ligand binding domain VP1474 e2b6312e00332fb925da2e5beb10b416 700 Pfam PF10531 SLBB domain 590 633 4.0E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain VP1474 e2b6312e00332fb925da2e5beb10b416 700 Pfam PF10531 SLBB domain 299 351 1.1E-11 T 22-04-2016 IPR019554 Soluble ligand binding domain VP1474 e2b6312e00332fb925da2e5beb10b416 700 Pfam PF10531 SLBB domain 396 446 8.6E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain VP1474 e2b6312e00332fb925da2e5beb10b416 700 Pfam PF10531 SLBB domain 495 538 2.4E-4 T 22-04-2016 IPR019554 Soluble ligand binding domain VP1474 e2b6312e00332fb925da2e5beb10b416 700 Pfam PF10531 SLBB domain 212 253 8.2E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain VP2669 52042bc138372e7a73b424410dce1230 241 PANTHER PTHR24220 5 238 1.5E-151 T 22-04-2016 VP2669 52042bc138372e7a73b424410dce1230 241 SUPERFAMILY SSF52540 3 237 4.97E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2669 52042bc138372e7a73b424410dce1230 241 PANTHER PTHR24220:SF497 5 238 1.5E-151 T 22-04-2016 VP2669 52042bc138372e7a73b424410dce1230 241 Pfam PF00005 ABC transporter 20 166 9.5E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2669 52042bc138372e7a73b424410dce1230 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 3.5E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VP2669 52042bc138372e7a73b424410dce1230 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 4.0E-126 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VP2669 52042bc138372e7a73b424410dce1230 241 Gene3D G3DSA:3.40.50.300 3 235 1.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2669 52042bc138372e7a73b424410dce1230 241 SMART SM00382 28 231 2.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2669 52042bc138372e7a73b424410dce1230 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 9.3E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 Gene3D G3DSA:3.40.50.10370 382 477 1.2E-41 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 PANTHER PTHR30181:SF2 1 621 0.0 T 22-04-2016 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 Gene3D G3DSA:3.40.930.10 507 645 1.6E-43 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 SUPERFAMILY SSF52794 385 472 6.67E-25 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 8.1E-170 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 PANTHER PTHR30181 1 621 0.0 T 22-04-2016 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 466 1.9E-11 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 SUPERFAMILY SSF55804 506 645 2.22E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 6.4E-19 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VP0370 cfa1566d04dafa6b60bd1682ddd2ebe9 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP0874 c7095f7048b2761682a48491c6291eaf 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 5.2E-78 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VP0874 c7095f7048b2761682a48491c6291eaf 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.1E-32 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VP0874 c7095f7048b2761682a48491c6291eaf 220 Gene3D G3DSA:2.160.20.70 101 218 2.4E-38 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VP0874 c7095f7048b2761682a48491c6291eaf 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.4E-30 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VP0874 c7095f7048b2761682a48491c6291eaf 220 PANTHER PTHR34108:SF1 1 205 2.9E-60 T 22-04-2016 VP0874 c7095f7048b2761682a48491c6291eaf 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.089 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VP0874 c7095f7048b2761682a48491c6291eaf 220 SUPERFAMILY SSF63848 113 216 9.68E-30 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VP0874 c7095f7048b2761682a48491c6291eaf 220 PANTHER PTHR34108 1 205 2.9E-60 T 22-04-2016 VP1820 24fcb66a061e283b1723053ffbd13f23 90 SUPERFAMILY SSF143011 9 89 1.27E-28 T 22-04-2016 VP1820 24fcb66a061e283b1723053ffbd13f23 90 PANTHER PTHR38039:SF1 7 90 2.9E-33 T 22-04-2016 VP1820 24fcb66a061e283b1723053ffbd13f23 90 PANTHER PTHR38039 7 90 2.9E-33 T 22-04-2016 VP1820 24fcb66a061e283b1723053ffbd13f23 90 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 11 90 7.1E-44 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 VP1820 24fcb66a061e283b1723053ffbd13f23 90 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 11 90 6.1E-37 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 SMART SM00345 12 71 1.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 PANTHER PTHR11751:SF402 13 97 5.7E-54 T 22-04-2016 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 PANTHER PTHR11751 13 97 5.7E-54 T 22-04-2016 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.354 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 3.8E-115 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 SUPERFAMILY SSF48008 178 270 8.63E-57 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 SUPERFAMILY SSF48008 79 137 8.63E-57 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.0E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.10.10.10 12 74 5.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.20.120.530 178 278 1.3E-67 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.20.120.530 80 137 1.3E-67 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP2071 16c1db47ed342c3b28bba00c4e700ba3 279 Pfam PF07840 FadR C-terminal domain 72 274 6.2E-70 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 PANTHER PTHR23133 12 99 3.1E-174 T 22-04-2016 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 PANTHER PTHR23133 165 357 3.1E-174 T 22-04-2016 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 SUPERFAMILY SSF54211 169 253 2.78E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP1140 930240fc9b982fa0617c0672a0cf97ad 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 2.1E-28 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VP1140 930240fc9b982fa0617c0672a0cf97ad 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 5.8E-48 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.678 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 2.1E-79 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 Gene3D G3DSA:3.40.50.1000 3 162 4.9E-43 T 22-04-2016 IPR023214 HAD-like domain VP1140 930240fc9b982fa0617c0672a0cf97ad 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 56.161 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 2.7E-65 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 3.8E-6 T 22-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase VP1140 930240fc9b982fa0617c0672a0cf97ad 357 Gene3D G3DSA:3.30.230.40 169 255 5.8E-38 T 22-04-2016 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 PANTHER PTHR23133:SF2 12 99 3.1E-174 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 PANTHER PTHR23133:SF2 165 357 3.1E-174 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VP1140 930240fc9b982fa0617c0672a0cf97ad 357 SUPERFAMILY SSF56784 3 158 4.2E-40 T 22-04-2016 IPR023214 HAD-like domain VP1140 930240fc9b982fa0617c0672a0cf97ad 357 SUPERFAMILY SSF54211 254 344 3.04E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP1140 930240fc9b982fa0617c0672a0cf97ad 357 Gene3D G3DSA:3.30.230.40 259 357 3.3E-32 T 22-04-2016 VP1147 d757b5088aac2b5bba95d9777393dab3 404 PANTHER PTHR33525:SF4 3 368 3.0E-130 T 22-04-2016 VP1147 d757b5088aac2b5bba95d9777393dab3 404 PANTHER PTHR33525 3 368 3.0E-130 T 22-04-2016 VP1147 d757b5088aac2b5bba95d9777393dab3 404 Gene3D G3DSA:3.20.20.450 78 181 4.0E-13 T 22-04-2016 IPR001633 EAL domain VP1147 d757b5088aac2b5bba95d9777393dab3 404 Pfam PF00563 EAL domain 64 190 1.4E-15 T 22-04-2016 IPR001633 EAL domain VP1147 d757b5088aac2b5bba95d9777393dab3 404 PIRSF PIRSF003180 1 403 1.4E-170 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VP1147 d757b5088aac2b5bba95d9777393dab3 404 SMART SM00052 2 195 7.3E-4 T 22-04-2016 IPR001633 EAL domain VP1147 d757b5088aac2b5bba95d9777393dab3 404 Pfam PF08668 HDOD domain 205 325 4.4E-13 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VP1147 d757b5088aac2b5bba95d9777393dab3 404 Gene3D G3DSA:1.10.3150.10 182 399 3.3E-32 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VP1147 d757b5088aac2b5bba95d9777393dab3 404 SUPERFAMILY SSF141868 5 193 7.06E-29 T 22-04-2016 IPR001633 EAL domain VP1147 d757b5088aac2b5bba95d9777393dab3 404 SUPERFAMILY SSF109604 181 400 2.04E-43 T 22-04-2016 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 3.0E-241 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Gene3D G3DSA:3.30.930.10 243 531 1.6E-122 T 22-04-2016 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 3.6E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Gene3D G3DSA:3.30.54.20 132 188 7.4E-22 T 22-04-2016 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 SMART SM00863 171 220 5.1E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 PANTHER PTHR11451 1 636 0.0 T 22-04-2016 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 PANTHER PTHR11451:SF31 1 636 0.0 T 22-04-2016 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Gene3D G3DSA:3.40.50.800 533 639 6.8E-36 T 22-04-2016 IPR004154 Anticodon-binding VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 SUPERFAMILY SSF52954 530 638 1.24E-31 T 22-04-2016 IPR004154 Anticodon-binding VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Gene3D G3DSA:3.10.20.30 1 64 3.5E-22 T 22-04-2016 IPR012675 Beta-grasp domain VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Gene3D G3DSA:3.30.980.10 67 130 1.2E-41 T 22-04-2016 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Gene3D G3DSA:3.30.980.10 189 224 1.2E-41 T 22-04-2016 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 SUPERFAMILY SSF55186 65 242 3.27E-65 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 SUPERFAMILY SSF55681 244 527 6.77E-99 T 22-04-2016 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Pfam PF02824 TGS domain 4 61 1.2E-11 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.097 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Pfam PF03129 Anticodon binding domain 542 631 1.9E-21 T 22-04-2016 IPR004154 Anticodon-binding VP1280 cf07cc2930fcd7cb2fd5842e1040c2f3 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 7.7E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VP1747 89de2c7e9cbe05cb48e6b680989ae45f 475 PANTHER PTHR11785:SF216 11 458 2.9E-106 T 22-04-2016 VP1747 89de2c7e9cbe05cb48e6b680989ae45f 475 Pfam PF13520 Amino acid permease 11 448 8.7E-53 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP1747 89de2c7e9cbe05cb48e6b680989ae45f 475 PANTHER PTHR11785 11 458 2.9E-106 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP1747 89de2c7e9cbe05cb48e6b680989ae45f 475 PIRSF PIRSF006060 8 472 3.9E-54 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP0097 deac8377b1a71e44d8332ce9f062c82a 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.624 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VP0097 deac8377b1a71e44d8332ce9f062c82a 544 Pfam PF03109 ABC1 family 112 230 3.6E-36 T 22-04-2016 IPR004147 UbiB domain VP0097 deac8377b1a71e44d8332ce9f062c82a 544 PANTHER PTHR10566:SF79 1 458 2.9E-284 T 22-04-2016 VP0097 deac8377b1a71e44d8332ce9f062c82a 544 PANTHER PTHR10566 1 458 2.9E-284 T 22-04-2016 VP0097 deac8377b1a71e44d8332ce9f062c82a 544 SUPERFAMILY SSF56112 94 158 1.3E-46 T 22-04-2016 IPR011009 Protein kinase-like domain VP0097 deac8377b1a71e44d8332ce9f062c82a 544 SUPERFAMILY SSF56112 193 436 1.3E-46 T 22-04-2016 IPR011009 Protein kinase-like domain VP0097 deac8377b1a71e44d8332ce9f062c82a 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 4.4E-176 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VP2458 8f03d3599fe349cb69069d3cf3f64f88 151 Pfam PF02576 Putative ribosome maturation factor RimP 12 147 2.9E-49 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VP2458 8f03d3599fe349cb69069d3cf3f64f88 151 PANTHER PTHR33867:SF1 1 151 3.3E-59 T 22-04-2016 VP2458 8f03d3599fe349cb69069d3cf3f64f88 151 Gene3D G3DSA:3.30.300.70 2 80 2.9E-33 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VP2458 8f03d3599fe349cb69069d3cf3f64f88 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.688 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VP2458 8f03d3599fe349cb69069d3cf3f64f88 151 SUPERFAMILY SSF75420 2 83 2.62E-26 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VP2458 8f03d3599fe349cb69069d3cf3f64f88 151 Gene3D G3DSA:2.30.30.180 88 148 5.4E-14 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VP2458 8f03d3599fe349cb69069d3cf3f64f88 151 SUPERFAMILY SSF74942 84 151 1.02E-17 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VP2458 8f03d3599fe349cb69069d3cf3f64f88 151 PANTHER PTHR33867 1 151 3.3E-59 T 22-04-2016 VP1948 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50104 1 65 5.78E-12 T 22-04-2016 IPR008991 Translation protein SH3-like domain VP1948 b76e1b2d6756d39331de36103ae8050a 188 SMART SM00841 132 187 2.7E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VP1948 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.30.30.30 1 65 7.5E-16 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VP1948 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50249 132 188 2.06E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1948 b76e1b2d6756d39331de36103ae8050a 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VP1948 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.3E-17 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VP1948 b76e1b2d6756d39331de36103ae8050a 188 PIRSF PIRSF005901 1 188 7.4E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VP1948 b76e1b2d6756d39331de36103ae8050a 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 45.647 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP VP1948 b76e1b2d6756d39331de36103ae8050a 188 PANTHER PTHR30053:SF5 1 188 1.5E-102 T 22-04-2016 VP1948 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50249 67 129 1.84E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1948 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 5.0E-19 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VP1948 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.40.50.140 131 188 7.6E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1948 b76e1b2d6756d39331de36103ae8050a 188 SMART SM01185 69 124 4.8E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VP1948 b76e1b2d6756d39331de36103ae8050a 188 PANTHER PTHR30053 1 188 1.5E-102 T 22-04-2016 VP1948 b76e1b2d6756d39331de36103ae8050a 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 4.6E-90 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP VP1948 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.40.50.140 67 129 1.5E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1948 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.0E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 317 28.656 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 SUPERFAMILY SSF55326 3 137 6.67E-33 T 22-04-2016 VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 2.4E-20 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 SUPERFAMILY SSF56042 141 307 8.82E-34 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 Gene3D G3DSA:3.30.1330.10 3 140 5.9E-41 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 301 1.6E-9 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 PANTHER PTHR30270 1 321 4.1E-126 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 PANTHER PTHR30270:SF0 1 321 4.1E-126 T 22-04-2016 VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 PIRSF PIRSF005303 1 320 2.5E-81 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 Gene3D G3DSA:3.90.650.10 144 320 4.9E-46 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP0684 a641e63eaf82a910670f7fc1ca1bc11c 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 1.5E-101 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VP1481 ad37586db4fd61e6293aa9e73b4abfef 288 PANTHER PTHR12149 1 286 8.2E-114 T 22-04-2016 VP1481 ad37586db4fd61e6293aa9e73b4abfef 288 Gene3D G3DSA:3.30.200.20 31 90 8.9E-5 T 22-04-2016 VP1481 ad37586db4fd61e6293aa9e73b4abfef 288 Gene3D G3DSA:3.90.1200.10 99 249 5.1E-10 T 22-04-2016 VP1481 ad37586db4fd61e6293aa9e73b4abfef 288 PIRSF PIRSF006221 1 288 6.8E-109 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VP1481 ad37586db4fd61e6293aa9e73b4abfef 288 PANTHER PTHR12149:SF8 1 286 8.2E-114 T 22-04-2016 VP1481 ad37586db4fd61e6293aa9e73b4abfef 288 Pfam PF03881 Fructosamine kinase 1 286 2.0E-125 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VP1481 ad37586db4fd61e6293aa9e73b4abfef 288 SUPERFAMILY SSF56112 3 282 3.64E-44 T 22-04-2016 IPR011009 Protein kinase-like domain VP0040 a8690a78eabb2e565885b7c24129cdd5 193 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 65 190 5.1E-7 T 22-04-2016 IPR032551 HTH-type transcriptional repressor, C-terminal VP0040 a8690a78eabb2e565885b7c24129cdd5 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 7.3E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP0040 a8690a78eabb2e565885b7c24129cdd5 193 Gene3D G3DSA:1.10.357.10 8 191 8.5E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VP0040 a8690a78eabb2e565885b7c24129cdd5 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VP0040 a8690a78eabb2e565885b7c24129cdd5 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP0040 a8690a78eabb2e565885b7c24129cdd5 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP0040 a8690a78eabb2e565885b7c24129cdd5 193 SUPERFAMILY SSF46689 6 81 6.48E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0040 a8690a78eabb2e565885b7c24129cdd5 193 PANTHER PTHR30055:SF82 1 190 8.0E-67 T 22-04-2016 VP0040 a8690a78eabb2e565885b7c24129cdd5 193 PANTHER PTHR30055 1 190 8.0E-67 T 22-04-2016 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:4.10.950.10 196 273 1.6E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 SUPERFAMILY SSF50249 2 125 1.3E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0260 96fd3b1d306a8d7654030b22d23764e0 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:2.30.30.30 119 195 1.2E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 SMART SM01383 42 118 1.7E-44 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.1E-130 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 PANTHER PTHR13691 1 274 5.9E-145 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.5E-32 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:2.40.50.140 1 114 1.7E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0260 96fd3b1d306a8d7654030b22d23764e0 274 PANTHER PTHR13691:SF5 1 274 5.9E-145 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 SMART SM01382 124 252 5.1E-92 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.9E-56 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.389 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 PIRSF PIRSF002158 13 274 5.6E-101 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0260 96fd3b1d306a8d7654030b22d23764e0 274 SUPERFAMILY SSF50104 127 272 1.68E-61 T 22-04-2016 IPR008991 Translation protein SH3-like domain VP1226 52deb0e5413786dadd37a135c0dcb938 836 PANTHER PTHR30489:SF6 15 205 4.0E-291 T 22-04-2016 VP1226 52deb0e5413786dadd37a135c0dcb938 836 PANTHER PTHR30489:SF6 234 835 4.0E-291 T 22-04-2016 VP1226 52deb0e5413786dadd37a135c0dcb938 836 PANTHER PTHR30489 15 205 4.0E-291 T 22-04-2016 VP1226 52deb0e5413786dadd37a135c0dcb938 836 Pfam PF12704 MacB-like periplasmic core domain 485 676 5.6E-7 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VP1226 52deb0e5413786dadd37a135c0dcb938 836 PANTHER PTHR30489 234 835 4.0E-291 T 22-04-2016 VP1226 52deb0e5413786dadd37a135c0dcb938 836 Pfam PF02687 FtsX-like permease family 712 828 1.1E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VP1226 52deb0e5413786dadd37a135c0dcb938 836 Pfam PF02687 FtsX-like permease family 263 387 5.6E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 3.4E-30 T 22-04-2016 IPR010518 Flagellar regulatory FleQ VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF00158 Sigma-54 interaction domain 137 304 1.3E-72 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 9.9E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:1.10.8.60 310 384 2.1E-21 T 22-04-2016 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:3.40.50.300 134 309 4.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 SMART SM00382 157 301 5.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 PANTHER PTHR32071:SF36 1 387 1.5E-230 T 22-04-2016 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 PANTHER PTHR32071:SF36 412 488 1.5E-230 T 22-04-2016 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF52172 6 182 5.09E-5 T 22-04-2016 IPR011006 CheY-like superfamily VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:1.10.10.60 428 486 3.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 PANTHER PTHR32071 1 387 1.5E-230 T 22-04-2016 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 PANTHER PTHR32071 412 488 1.5E-230 T 22-04-2016 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF52540 137 378 2.07E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF46689 349 392 7.17E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF46689 434 486 7.17E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2253 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP0894 2d6560164f9c0f488f3a4a2315ccd8fa 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 13.802 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VP0894 2d6560164f9c0f488f3a4a2315ccd8fa 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 2.8E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP0894 2d6560164f9c0f488f3a4a2315ccd8fa 85 Gene3D G3DSA:1.10.1200.10 4 83 9.2E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP0894 2d6560164f9c0f488f3a4a2315ccd8fa 85 SUPERFAMILY SSF47336 4 83 9.03E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 SMART SM00382 73 364 3.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 1276 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 Pfam PF00270 DEAD/DEAH box helicase 68 214 3.5E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 PANTHER PTHR18934:SF109 57 682 0.0 T 22-04-2016 VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 PANTHER PTHR18934:SF109 719 847 0.0 T 22-04-2016 VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 SMART SM00490 284 384 3.1E-15 T 22-04-2016 IPR001650 Helicase, C-terminal VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 558 678 4.2E-18 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 Pfam PF04408 Helicase associated domain (HA2) 446 537 1.5E-17 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 Gene3D G3DSA:3.40.50.300 58 214 1.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 Gene3D G3DSA:3.40.50.300 253 398 8.3E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 SUPERFAMILY SSF52540 55 547 5.14E-116 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 SMART SM00847 444 539 1.4E-36 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 SMART SM00487 56 240 2.3E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 Pfam PF11898 Domain of unknown function (DUF3418) 692 1276 5.3E-232 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 Pfam PF00271 Helicase conserved C-terminal domain 270 383 1.5E-10 T 22-04-2016 IPR001650 Helicase, C-terminal VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 PANTHER PTHR18934 57 682 0.0 T 22-04-2016 VP1453 61e12e3606f7d18bbe004e3fb5f198b1 1278 PANTHER PTHR18934 719 847 0.0 T 22-04-2016 VP0643 729a50b6e1ad5fdfd83524e51163632f 599 Pfam PF00589 Phage integrase family 423 572 3.5E-11 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0643 729a50b6e1ad5fdfd83524e51163632f 599 Gene3D G3DSA:1.10.150.130 261 384 2.1E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VP0643 729a50b6e1ad5fdfd83524e51163632f 599 Gene3D G3DSA:1.10.443.10 392 573 9.1E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0643 729a50b6e1ad5fdfd83524e51163632f 599 SUPERFAMILY SSF56349 261 573 6.77E-46 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP0643 729a50b6e1ad5fdfd83524e51163632f 599 PANTHER PTHR30349 251 319 1.3E-30 T 22-04-2016 VP0643 729a50b6e1ad5fdfd83524e51163632f 599 PANTHER PTHR30349 344 570 1.3E-30 T 22-04-2016 VP0643 729a50b6e1ad5fdfd83524e51163632f 599 PANTHER PTHR30349:SF20 251 319 1.3E-30 T 22-04-2016 VP0643 729a50b6e1ad5fdfd83524e51163632f 599 PANTHER PTHR30349:SF20 344 570 1.3E-30 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 Gene3D G3DSA:2.60.34.10 387 528 2.2E-55 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VP0600 773c710a7289b61ab69b288f6910d5f1 617 Gene3D G3DSA:3.30.30.30 88 127 1.4E-9 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.627 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VP0600 773c710a7289b61ab69b288f6910d5f1 617 PANTHER PTHR19375:SF176 19 606 0.0 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 4.2E-269 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VP0600 773c710a7289b61ab69b288f6910d5f1 617 PANTHER PTHR19375 19 606 0.0 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 Gene3D G3DSA:1.20.1270.10 529 616 2.6E-30 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VP0600 773c710a7289b61ab69b288f6910d5f1 617 Gene3D G3DSA:3.30.420.40 128 200 2.4E-52 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 Gene3D G3DSA:3.30.420.40 20 87 2.4E-52 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 SUPERFAMILY SSF100934 504 616 1.75E-34 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VP0600 773c710a7289b61ab69b288f6910d5f1 617 SUPERFAMILY SSF100920 384 537 1.02E-51 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VP0600 773c710a7289b61ab69b288f6910d5f1 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 Gene3D G3DSA:3.30.420.40 201 238 8.9E-31 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 Gene3D G3DSA:3.30.420.40 314 356 8.9E-31 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VP0600 773c710a7289b61ab69b288f6910d5f1 617 SUPERFAMILY SSF53067 19 196 4.53E-50 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 Pfam PF00012 Hsp70 protein 22 601 7.1E-191 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0600 773c710a7289b61ab69b288f6910d5f1 617 Gene3D G3DSA:3.90.640.10 239 310 3.3E-6 T 22-04-2016 VP0600 773c710a7289b61ab69b288f6910d5f1 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VP0600 773c710a7289b61ab69b288f6910d5f1 617 SUPERFAMILY SSF53067 200 377 9.36E-50 T 22-04-2016 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 PANTHER PTHR10060:SF20 1 253 1.0E-127 T 22-04-2016 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 Gene3D G3DSA:3.20.20.140 1 253 9.4E-90 T 22-04-2016 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 PANTHER PTHR10060 1 253 1.0E-127 T 22-04-2016 IPR001130 TatD family GO:0016788 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 PIRSF PIRSF005902 1 255 1.9E-83 T 22-04-2016 IPR001130 TatD family GO:0016788 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.6E-95 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 SUPERFAMILY SSF51556 1 253 2.61E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 Pfam PF01026 TatD related DNase 3 253 4.5E-80 T 22-04-2016 IPR001130 TatD family GO:0016788 VP2047 d4ee37db2c85a28fa8f4172b94dec64c 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 PIRSF PIRSF000538 4 503 1.4E-177 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.3E-86 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.326 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.1E-226 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Gene3D G3DSA:3.30.420.40 2 254 2.0E-105 T 22-04-2016 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Gene3D G3DSA:3.30.420.40 255 498 4.6E-102 T 22-04-2016 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 PANTHER PTHR10196:SF9 1 505 1.0E-259 T 22-04-2016 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 3.0E-60 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 PANTHER PTHR10196 1 505 1.0E-259 T 22-04-2016 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 SUPERFAMILY SSF53067 5 256 3.05E-94 T 22-04-2016 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 SUPERFAMILY SSF53067 255 497 5.18E-85 T 22-04-2016 VP2386 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VP3028 6eb970077af8f45ef38ee43b6c3caf3d 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 8.2E-30 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VP3028 6eb970077af8f45ef38ee43b6c3caf3d 127 PANTHER PTHR28259 6 126 6.0E-37 T 22-04-2016 VP3028 6eb970077af8f45ef38ee43b6c3caf3d 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 2.6E-23 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VP3028 6eb970077af8f45ef38ee43b6c3caf3d 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.99 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VP0189 880926cccbf13a6bdd520a0e3739817f 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 9.6E-9 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VP0189 880926cccbf13a6bdd520a0e3739817f 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VP0189 880926cccbf13a6bdd520a0e3739817f 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.6E-93 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VP0189 880926cccbf13a6bdd520a0e3739817f 269 Gene3D G3DSA:1.10.8.50 130 269 2.0E-48 T 22-04-2016 VP0189 880926cccbf13a6bdd520a0e3739817f 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.629 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VP0189 880926cccbf13a6bdd520a0e3739817f 269 Gene3D G3DSA:3.20.190.10 2 129 2.5E-38 T 22-04-2016 VP0189 880926cccbf13a6bdd520a0e3739817f 269 SUPERFAMILY SSF57716 217 268 1.31E-16 T 22-04-2016 VP0189 880926cccbf13a6bdd520a0e3739817f 269 SUPERFAMILY SSF81624 2 138 6.15E-42 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VP0189 880926cccbf13a6bdd520a0e3739817f 269 PANTHER PTHR22993:SF15 1 269 1.8E-127 T 22-04-2016 VP0189 880926cccbf13a6bdd520a0e3739817f 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.6E-31 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VP0189 880926cccbf13a6bdd520a0e3739817f 269 SMART SM01232 129 221 1.3E-41 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VP0189 880926cccbf13a6bdd520a0e3739817f 269 PANTHER PTHR22993 1 269 1.8E-127 T 22-04-2016 VP0189 880926cccbf13a6bdd520a0e3739817f 269 SMART SM00898 2 115 3.8E-55 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VP0189 880926cccbf13a6bdd520a0e3739817f 269 SUPERFAMILY SSF46946 130 221 1.38E-27 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VP0189 880926cccbf13a6bdd520a0e3739817f 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.5E-24 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VP1431 6798a814adfc01dca444b53e95117fb5 592 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1431 6798a814adfc01dca444b53e95117fb5 592 Pfam PF00005 ABC transporter 353 501 7.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1431 6798a814adfc01dca444b53e95117fb5 592 PANTHER PTHR24221 6 580 4.8E-219 T 22-04-2016 VP1431 6798a814adfc01dca444b53e95117fb5 592 Gene3D G3DSA:1.20.1560.10 7 322 1.3E-74 T 22-04-2016 VP1431 6798a814adfc01dca444b53e95117fb5 592 SMART SM00382 362 547 7.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1431 6798a814adfc01dca444b53e95117fb5 592 SUPERFAMILY SSF90123 8 327 8.76E-71 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1431 6798a814adfc01dca444b53e95117fb5 592 PANTHER PTHR24221:SF256 6 580 4.8E-219 T 22-04-2016 VP1431 6798a814adfc01dca444b53e95117fb5 592 Gene3D G3DSA:3.40.50.300 336 566 2.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1431 6798a814adfc01dca444b53e95117fb5 592 Pfam PF00664 ABC transporter transmembrane region 22 291 1.8E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1431 6798a814adfc01dca444b53e95117fb5 592 SUPERFAMILY SSF52540 332 571 7.56E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 SUPERFAMILY SSF143800 1 81 2.31E-23 T 22-04-2016 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 Pfam PF01197 Ribosomal protein L31 1 79 1.4E-27 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.8E-19 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 PANTHER PTHR33280:SF3 1 81 1.5E-41 T 22-04-2016 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.769 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2331 1a219fc9de3661e94a8fade5d68d9a7d 86 PANTHER PTHR33280 1 81 1.5E-41 T 22-04-2016 VP3044 310cc96208df419460750dcfaec2d9f8 427 PANTHER PTHR22807 35 424 8.0E-128 T 22-04-2016 VP3044 310cc96208df419460750dcfaec2d9f8 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP3044 310cc96208df419460750dcfaec2d9f8 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP3044 310cc96208df419460750dcfaec2d9f8 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP3044 310cc96208df419460750dcfaec2d9f8 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP3044 310cc96208df419460750dcfaec2d9f8 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP3044 310cc96208df419460750dcfaec2d9f8 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 5.3E-69 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP3044 310cc96208df419460750dcfaec2d9f8 427 Gene3D G3DSA:1.10.940.10 1 144 8.1E-44 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VP3044 310cc96208df419460750dcfaec2d9f8 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 1.3E-152 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP3044 310cc96208df419460750dcfaec2d9f8 427 Gene3D G3DSA:3.30.70.1170 170 227 1.4E-26 T 22-04-2016 VP3044 310cc96208df419460750dcfaec2d9f8 427 SUPERFAMILY SSF48013 1 146 1.96E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VP3044 310cc96208df419460750dcfaec2d9f8 427 Gene3D G3DSA:1.10.287.730 145 169 2.0E-15 T 22-04-2016 VP3044 310cc96208df419460750dcfaec2d9f8 427 PANTHER PTHR22807:SF30 35 424 8.0E-128 T 22-04-2016 VP3044 310cc96208df419460750dcfaec2d9f8 427 SUPERFAMILY SSF53335 139 424 1.67E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP3044 310cc96208df419460750dcfaec2d9f8 427 Pfam PF01029 NusB family 1 123 3.7E-24 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VP3044 310cc96208df419460750dcfaec2d9f8 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP3044 310cc96208df419460750dcfaec2d9f8 427 Gene3D G3DSA:3.40.50.150 229 424 2.5E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1423 7561f575ec8fdc271f53ac5c739a159d 421 SUPERFAMILY SSF109604 239 396 5.79E-33 T 22-04-2016 VP1423 7561f575ec8fdc271f53ac5c739a159d 421 SUPERFAMILY SSF109604 26 194 6.49E-17 T 22-04-2016 VP1423 7561f575ec8fdc271f53ac5c739a159d 421 Gene3D G3DSA:1.10.3210.10 22 204 1.4E-18 T 22-04-2016 IPR006674 HD domain VP1423 7561f575ec8fdc271f53ac5c739a159d 421 Gene3D G3DSA:1.10.3210.10 237 396 2.5E-25 T 22-04-2016 IPR006674 HD domain VP1423 7561f575ec8fdc271f53ac5c739a159d 421 SMART SM00471 245 380 1.5E-11 T 22-04-2016 IPR003607 HD/PDEase domain VP1423 7561f575ec8fdc271f53ac5c739a159d 421 SMART SM00471 31 160 2.7 T 22-04-2016 IPR003607 HD/PDEase domain VP1423 7561f575ec8fdc271f53ac5c739a159d 421 TIGRFAM TIGR00277 HDIG: HDIG domain 249 339 5.4E-9 T 22-04-2016 IPR006675 HDIG domain VP1423 7561f575ec8fdc271f53ac5c739a159d 421 Pfam PF01966 HD domain 249 370 4.1E-19 T 22-04-2016 IPR006674 HD domain VP1423 7561f575ec8fdc271f53ac5c739a159d 421 Pfam PF01966 HD domain 37 147 1.2E-5 T 22-04-2016 IPR006674 HD domain VPA0742 b36d286457f7078632279ace9b98008d 54 SUPERFAMILY SSF52540 1 53 2.44E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0742 b36d286457f7078632279ace9b98008d 54 Gene3D G3DSA:1.10.150.300 32 54 5.4E-6 T 22-04-2016 IPR023192 TGS-like domain VPA0742 b36d286457f7078632279ace9b98008d 54 PANTHER PTHR23305 1 54 2.0E-26 T 22-04-2016 VPA0742 b36d286457f7078632279ace9b98008d 54 PANTHER PTHR23305:SF12 1 54 2.0E-26 T 22-04-2016 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 SUPERFAMILY SSF46557 3 78 1.44E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 Gene3D G3DSA:1.10.287.180 3 75 1.2E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 PANTHER PTHR30437 2 163 2.1E-82 T 22-04-2016 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 PIRSF PIRSF006092 2 158 4.9E-43 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.637 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 PANTHER PTHR30437:SF6 2 163 2.1E-82 T 22-04-2016 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 1.6E-71 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.016 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.3E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.0E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 SUPERFAMILY SSF54534 80 156 1.02E-18 T 22-04-2016 VP0152 760ad6ea0e7f7e22e908885f9d16627e 163 Gene3D G3DSA:3.10.50.30 76 156 1.0E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VP2183 d14dc554b68ee4f9a6107a04631f2c62 368 SMART SM00448 20 132 1.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2183 d14dc554b68ee4f9a6107a04631f2c62 368 Gene3D G3DSA:3.40.50.2300 22 140 1.4E-34 T 22-04-2016 VP2183 d14dc554b68ee4f9a6107a04631f2c62 368 PANTHER PTHR26402 20 137 2.1E-36 T 22-04-2016 VP2183 d14dc554b68ee4f9a6107a04631f2c62 368 SUPERFAMILY SSF52172 19 137 1.38E-34 T 22-04-2016 IPR011006 CheY-like superfamily VP2183 d14dc554b68ee4f9a6107a04631f2c62 368 Pfam PF00072 Response regulator receiver domain 22 132 7.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0914 fc5deeee8742b9207707538277117fdf 445 SUPERFAMILY SSF52540 144 373 2.83E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0914 fc5deeee8742b9207707538277117fdf 445 SMART SM00382 164 307 4.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0914 fc5deeee8742b9207707538277117fdf 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP0914 fc5deeee8742b9207707538277117fdf 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP0914 fc5deeee8742b9207707538277117fdf 445 Pfam PF00158 Sigma-54 interaction domain 144 310 2.2E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP0914 fc5deeee8742b9207707538277117fdf 445 Gene3D G3DSA:3.40.50.2300 2 127 3.5E-34 T 22-04-2016 VP0914 fc5deeee8742b9207707538277117fdf 445 SMART SM00448 2 114 3.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0914 fc5deeee8742b9207707538277117fdf 445 Pfam PF00072 Response regulator receiver domain 4 114 2.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0914 fc5deeee8742b9207707538277117fdf 445 SUPERFAMILY SSF46689 391 440 1.05E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0914 fc5deeee8742b9207707538277117fdf 445 SUPERFAMILY SSF52172 2 188 8.68E-39 T 22-04-2016 IPR011006 CheY-like superfamily VP0914 fc5deeee8742b9207707538277117fdf 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 7.3E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0914 fc5deeee8742b9207707538277117fdf 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP0914 fc5deeee8742b9207707538277117fdf 445 Gene3D G3DSA:1.10.8.60 317 366 9.4E-23 T 22-04-2016 VP0914 fc5deeee8742b9207707538277117fdf 445 PANTHER PTHR32071:SF11 1 445 1.1E-257 T 22-04-2016 VP0914 fc5deeee8742b9207707538277117fdf 445 Gene3D G3DSA:3.40.50.300 143 316 5.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0914 fc5deeee8742b9207707538277117fdf 445 Gene3D G3DSA:1.10.10.60 367 440 2.3E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0914 fc5deeee8742b9207707538277117fdf 445 PANTHER PTHR32071 1 445 1.1E-257 T 22-04-2016 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 Pfam PF00549 CoA-ligase 262 382 9.2E-25 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 SUPERFAMILY SSF52210 239 385 4.58E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 Pfam PF08442 ATP-grasp domain 2 203 3.6E-79 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 Gene3D G3DSA:3.40.50.261 241 383 9.4E-66 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 PANTHER PTHR11815 1 388 5.4E-227 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 6.3E-174 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 Gene3D G3DSA:3.30.470.20 96 239 1.4E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.515 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 PIRSF PIRSF001554 1 388 3.2E-154 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 Gene3D G3DSA:3.30.1490.20 22 95 1.5E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP0849 43faf99f17ebcafb1ca074f6663cc9ec 388 SUPERFAMILY SSF56059 1 238 7.81E-79 T 22-04-2016 VP1537 1afd44b0746c0bcd7d4ee8e22c5b6ce4 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 5.9E-56 T 22-04-2016 VP1537 1afd44b0746c0bcd7d4ee8e22c5b6ce4 225 PANTHER PTHR42208:SF1 1 225 8.4E-60 T 22-04-2016 VP1537 1afd44b0746c0bcd7d4ee8e22c5b6ce4 225 PANTHER PTHR42208 1 225 8.4E-60 T 22-04-2016 VP0261 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VP0261 1dc3f83136094783a7b663c808a99eff 92 PANTHER PTHR11880 1 91 6.8E-58 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VP0261 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 VP0261 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VP0261 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VP0261 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VP0261 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VP0261 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VP0261 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-37 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VP0261 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 91 2.3E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VP0261 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 9.2E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VP0738 fe1e23b8154a9cd2ed0a726ce68d0982 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 7.1E-53 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VP0738 fe1e23b8154a9cd2ed0a726ce68d0982 196 PANTHER PTHR17224 5 195 2.3E-84 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VP0738 fe1e23b8154a9cd2ed0a726ce68d0982 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 2.9E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VP0738 fe1e23b8154a9cd2ed0a726ce68d0982 196 SUPERFAMILY SSF53178 5 194 3.66E-69 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VP0738 fe1e23b8154a9cd2ed0a726ce68d0982 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VP0738 fe1e23b8154a9cd2ed0a726ce68d0982 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VP0738 fe1e23b8154a9cd2ed0a726ce68d0982 196 Gene3D G3DSA:3.40.50.1470 3 193 1.0E-71 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VP0738 fe1e23b8154a9cd2ed0a726ce68d0982 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.733 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VPA0696 946b1610dc198abc92a8d4e499769e13 51 Pfam PF02609 Exonuclease VII small subunit 9 51 1.7E-14 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPA0696 946b1610dc198abc92a8d4e499769e13 51 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 48 1.0E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPA0696 946b1610dc198abc92a8d4e499769e13 51 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 51 5.5E-16 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPA0696 946b1610dc198abc92a8d4e499769e13 51 Gene3D G3DSA:1.10.287.1040 3 51 1.1E-18 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPA0696 946b1610dc198abc92a8d4e499769e13 51 PANTHER PTHR34137 2 51 5.0E-16 T 22-04-2016 VPA0696 946b1610dc198abc92a8d4e499769e13 51 SUPERFAMILY SSF116842 2 51 2.09E-14 T 22-04-2016 VP1711 c2dc2db712f99768e01659320846c191 228 PIRSF PIRSF006171 3 228 2.2E-79 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 VP1711 c2dc2db712f99768e01659320846c191 228 Pfam PF00072 Response regulator receiver domain 7 118 9.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1711 c2dc2db712f99768e01659320846c191 228 Gene3D G3DSA:3.40.50.2300 2 129 2.2E-27 T 22-04-2016 VP1711 c2dc2db712f99768e01659320846c191 228 Pfam PF12431 Transcriptional regulator 134 162 3.6E-8 T 22-04-2016 IPR028141 Transcriptional regulator VP1711 c2dc2db712f99768e01659320846c191 228 SMART SM00448 5 118 6.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1711 c2dc2db712f99768e01659320846c191 228 PANTHER PTHR26402 5 134 8.2E-41 T 22-04-2016 VP1711 c2dc2db712f99768e01659320846c191 228 PANTHER PTHR26402 204 221 8.2E-41 T 22-04-2016 VP1711 c2dc2db712f99768e01659320846c191 228 PANTHER PTHR26402:SF522 5 134 8.2E-41 T 22-04-2016 VP1711 c2dc2db712f99768e01659320846c191 228 PANTHER PTHR26402:SF522 204 221 8.2E-41 T 22-04-2016 VP1711 c2dc2db712f99768e01659320846c191 228 SUPERFAMILY SSF52172 6 129 3.7E-31 T 22-04-2016 IPR011006 CheY-like superfamily VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 SUPERFAMILY SSF46785 3 72 1.92E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 SMART SM00866 91 228 7.6E-27 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 Pfam PF07702 UTRA domain 92 228 1.9E-32 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 SUPERFAMILY SSF64288 95 231 1.88E-36 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 PANTHER PTHR11751:SF364 3 94 4.9E-39 T 22-04-2016 VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 PANTHER PTHR11751 3 94 4.9E-39 T 22-04-2016 VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 3.0E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 1.3E-91 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 Gene3D G3DSA:3.40.1410.10 88 224 4.7E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 Gene3D G3DSA:1.10.10.10 3 74 1.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1277 73c34c6e5ee0d1d48b3f2127541df1d0 235 SMART SM00345 9 68 4.4E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP0335 818c00d1b3a77c4062e2f04a511d5735 126 Gene3D G3DSA:2.60.40.1470 5 125 2.1E-45 T 22-04-2016 IPR007474 ApaG domain VP0335 818c00d1b3a77c4062e2f04a511d5735 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.563 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG VP0335 818c00d1b3a77c4062e2f04a511d5735 126 Pfam PF04379 Protein of unknown function (DUF525) 18 103 1.5E-33 T 22-04-2016 IPR007474 ApaG domain VP0335 818c00d1b3a77c4062e2f04a511d5735 126 PANTHER PTHR14289 5 122 6.7E-50 T 22-04-2016 VP0335 818c00d1b3a77c4062e2f04a511d5735 126 SUPERFAMILY SSF110069 5 126 1.06E-46 T 22-04-2016 IPR007474 ApaG domain VP1298 611afe2cb2a56ea107935833a563e9c0 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 292 6.1E-99 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VP1298 611afe2cb2a56ea107935833a563e9c0 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VP1298 611afe2cb2a56ea107935833a563e9c0 295 SUPERFAMILY SSF53927 152 287 4.52E-38 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VP1298 611afe2cb2a56ea107935833a563e9c0 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 5.6E-42 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VP1298 611afe2cb2a56ea107935833a563e9c0 295 PANTHER PTHR11644 19 295 6.0E-131 T 22-04-2016 VP1298 611afe2cb2a56ea107935833a563e9c0 295 SUPERFAMILY SSF53927 1 146 1.02E-40 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VP1298 611afe2cb2a56ea107935833a563e9c0 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.844 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VP1298 611afe2cb2a56ea107935833a563e9c0 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 142 4.8E-12 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VP1298 611afe2cb2a56ea107935833a563e9c0 295 PIRSF PIRSF006334 14 295 1.3E-109 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VP1298 611afe2cb2a56ea107935833a563e9c0 295 Gene3D G3DSA:3.40.140.10 32 176 1.0E-43 T 22-04-2016 VP1298 611afe2cb2a56ea107935833a563e9c0 295 Gene3D G3DSA:3.40.140.10 184 287 8.4E-24 T 22-04-2016 VP1298 611afe2cb2a56ea107935833a563e9c0 295 PANTHER PTHR11644:SF15 19 295 6.0E-131 T 22-04-2016 VP2136 c427b6d977e9afbaf70a964efe963ea6 370 SUPERFAMILY SSF56349 10 311 1.68E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP2136 c427b6d977e9afbaf70a964efe963ea6 370 Gene3D G3DSA:1.10.443.10 114 311 1.7E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP2136 c427b6d977e9afbaf70a964efe963ea6 370 Gene3D G3DSA:1.10.150.130 11 105 7.0E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VP2136 c427b6d977e9afbaf70a964efe963ea6 370 PANTHER PTHR30349 14 337 2.1E-28 T 22-04-2016 VP2136 c427b6d977e9afbaf70a964efe963ea6 370 Pfam PF00589 Phage integrase family 124 304 1.7E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP1448 32e83887f2199b476faa8c670970fc8d 209 SUPERFAMILY SSF54862 1 202 1.36E-69 T 22-04-2016 VP1448 32e83887f2199b476faa8c670970fc8d 209 Pfam PF12800 4Fe-4S binding domain 14 28 0.097 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1448 32e83887f2199b476faa8c670970fc8d 209 PANTHER PTHR11938:SF85 1 160 3.1E-83 T 22-04-2016 VP1448 32e83887f2199b476faa8c670970fc8d 209 Gene3D G3DSA:3.30.70.20 75 106 4.0E-12 T 22-04-2016 VP1448 32e83887f2199b476faa8c670970fc8d 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1448 32e83887f2199b476faa8c670970fc8d 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 166 1.4E-83 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B VP1448 32e83887f2199b476faa8c670970fc8d 209 Gene3D G3DSA:3.30.70.20 142 189 3.8E-30 T 22-04-2016 VP1448 32e83887f2199b476faa8c670970fc8d 209 Gene3D G3DSA:3.30.70.20 6 74 3.8E-30 T 22-04-2016 VP1448 32e83887f2199b476faa8c670970fc8d 209 Gene3D G3DSA:3.30.70.20 107 141 1.1E-15 T 22-04-2016 VP1448 32e83887f2199b476faa8c670970fc8d 209 Pfam PF13247 4Fe-4S dicluster domain 61 156 3.3E-30 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1448 32e83887f2199b476faa8c670970fc8d 209 PANTHER PTHR11938 1 160 3.1E-83 T 22-04-2016 VP1167 704ccebd0d54e539136bc56ece1a3575 260 Pfam PF00005 ABC transporter 30 178 4.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1167 704ccebd0d54e539136bc56ece1a3575 260 Gene3D G3DSA:3.40.50.300 2 252 2.3E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1167 704ccebd0d54e539136bc56ece1a3575 260 PANTHER PTHR24220 6 259 1.9E-116 T 22-04-2016 VP1167 704ccebd0d54e539136bc56ece1a3575 260 SMART SM00382 38 227 5.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1167 704ccebd0d54e539136bc56ece1a3575 260 PANTHER PTHR24220:SF81 6 259 1.9E-116 T 22-04-2016 VP1167 704ccebd0d54e539136bc56ece1a3575 260 SUPERFAMILY SSF52540 3 252 1.11E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1167 704ccebd0d54e539136bc56ece1a3575 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2235 4e1125d51070585702b286260bb76bf2 699 PANTHER PTHR30161 3 699 0.0 T 22-04-2016 VP2235 4e1125d51070585702b286260bb76bf2 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 696 3.1E-266 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VP2235 4e1125d51070585702b286260bb76bf2 699 Pfam PF00771 FHIPEP family 32 689 1.0E-269 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP2235 4e1125d51070585702b286260bb76bf2 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site VP2235 4e1125d51070585702b286260bb76bf2 699 PIRSF PIRSF005419 10 699 1.5E-252 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP2235 4e1125d51070585702b286260bb76bf2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP2235 4e1125d51070585702b286260bb76bf2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP2235 4e1125d51070585702b286260bb76bf2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP2235 4e1125d51070585702b286260bb76bf2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP2235 4e1125d51070585702b286260bb76bf2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP2235 4e1125d51070585702b286260bb76bf2 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP2235 4e1125d51070585702b286260bb76bf2 699 PANTHER PTHR30161:SF1 3 699 0.0 T 22-04-2016 VP0012 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 126 244 1.74E-28 T 22-04-2016 VP0012 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.1E-35 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0012 81864a2af446d479dd2b4431ecb5c085 366 PANTHER PTHR30478 2 366 8.2E-145 T 22-04-2016 VP0012 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.0E-38 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0012 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.3E-38 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0012 81864a2af446d479dd2b4431ecb5c085 366 SMART SM00480 17 362 5.5E-151 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0012 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 1 121 2.8E-33 T 22-04-2016 VP0012 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 1 118 2.54E-30 T 22-04-2016 VP0012 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 122 248 1.5E-37 T 22-04-2016 VP0012 81864a2af446d479dd2b4431ecb5c085 366 PIRSF PIRSF000804 1 366 3.2E-118 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0012 81864a2af446d479dd2b4431ecb5c085 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 6.4E-109 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0012 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 249 366 2.2E-38 T 22-04-2016 VP0012 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 245 366 2.06E-36 T 22-04-2016 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 5.9E-60 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 PANTHER PTHR15184 1 467 0.0 T 22-04-2016 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.4E-20 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF47917 352 466 1.83E-50 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 SMART SM00382 142 334 5.9E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:3.40.50.300 76 350 3.7E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF52540 77 355 5.8E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.1E-248 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 PANTHER PTHR15184:SF44 1 467 0.0 T 22-04-2016 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF50615 1 75 2.17E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.912 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:1.10.1140.10 352 467 1.2E-50 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:2.40.10.170 2 75 7.4E-31 T 22-04-2016 VP3069 76e96d1aad10f6565f3772d07ce24dd0 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP2843 552a227d96a7d7efba79b7b698a5c63a 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 7.0E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VP2843 552a227d96a7d7efba79b7b698a5c63a 125 SUPERFAMILY SSF81343 7 125 4.36E-51 T 22-04-2016 VP2843 552a227d96a7d7efba79b7b698a5c63a 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.893 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VP2843 552a227d96a7d7efba79b7b698a5c63a 125 Pfam PF02313 Fumarate reductase subunit D 11 123 4.1E-44 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VP2843 552a227d96a7d7efba79b7b698a5c63a 125 Gene3D G3DSA:1.20.1300.10 7 125 5.7E-53 T 22-04-2016 VP2843 552a227d96a7d7efba79b7b698a5c63a 125 PIRSF PIRSF000179 6 125 7.3E-56 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VP0717 60ab413049b5299bf457a377ae69bd74 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.262 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP0717 60ab413049b5299bf457a377ae69bd74 220 SUPERFAMILY SSF55681 2 204 2.4E-71 T 22-04-2016 VP0717 60ab413049b5299bf457a377ae69bd74 220 PANTHER PTHR10993 1 209 9.0E-77 T 22-04-2016 VP0717 60ab413049b5299bf457a377ae69bd74 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 6.2E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VP0717 60ab413049b5299bf457a377ae69bd74 220 PIRSF PIRSF016262 1 216 4.3E-63 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP0717 60ab413049b5299bf457a377ae69bd74 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-25 T 22-04-2016 VP0717 60ab413049b5299bf457a377ae69bd74 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 5.9E-73 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP0717 60ab413049b5299bf457a377ae69bd74 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP0717 60ab413049b5299bf457a377ae69bd74 220 Gene3D G3DSA:3.90.1550.10 3 201 5.1E-72 T 22-04-2016 VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 SUPERFAMILY SSF52540 1 344 1.39E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 2.3E-120 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.3E-37 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 Gene3D G3DSA:3.40.50.300 1 172 3.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 Gene3D G3DSA:3.40.50.300 231 351 3.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.487 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 PANTHER PTHR32182 1 357 1.3E-73 T 22-04-2016 VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 PANTHER PTHR32182:SF0 1 357 1.3E-73 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VP0013 398cd26a122831a76bc212e7f5bfd8fe 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VP2923 97cda421c0e4a09f168303e1508af077 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 3.0E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2923 97cda421c0e4a09f168303e1508af077 122 Gene3D G3DSA:3.30.1390.10 51 122 1.8E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VP2923 97cda421c0e4a09f168303e1508af077 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 9.6E-30 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 VP2923 97cda421c0e4a09f168303e1508af077 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 9.7E-47 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2923 97cda421c0e4a09f168303e1508af077 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.522 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2923 97cda421c0e4a09f168303e1508af077 122 Gene3D G3DSA:1.20.5.710 2 50 8.6E-22 T 22-04-2016 VP2923 97cda421c0e4a09f168303e1508af077 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 1.0E-28 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 VP2923 97cda421c0e4a09f168303e1508af077 122 SUPERFAMILY SSF48300 4 58 8.76E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2923 97cda421c0e4a09f168303e1508af077 122 SUPERFAMILY SSF54736 51 122 1.46E-24 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VP1868 f0829544e8ec05a775da0d624aac34eb 194 SUPERFAMILY SSF55729 14 185 1.71E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1868 f0829544e8ec05a775da0d624aac34eb 194 Gene3D G3DSA:3.40.630.30 15 186 2.2E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1868 f0829544e8ec05a775da0d624aac34eb 194 PANTHER PTHR13256 17 192 3.7E-63 T 22-04-2016 VP1868 f0829544e8ec05a775da0d624aac34eb 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 2.4E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP1868 f0829544e8ec05a775da0d624aac34eb 194 PANTHER PTHR13256:SF24 17 192 3.7E-63 T 22-04-2016 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 PANTHER PTHR24096 17 480 1.3E-156 T 22-04-2016 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 Gene3D G3DSA:3.30.300.30 375 471 6.9E-19 T 22-04-2016 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 Gene3D G3DSA:2.30.38.10 327 374 2.7E-5 T 22-04-2016 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 Gene3D G3DSA:3.40.50.980 172 313 7.1E-27 T 22-04-2016 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 SUPERFAMILY SSF56801 19 478 1.57E-85 T 22-04-2016 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 PANTHER PTHR24096:SF109 17 480 1.3E-156 T 22-04-2016 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 40 468 1.6E-127 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 Pfam PF00501 AMP-binding enzyme 21 380 2.7E-50 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 Gene3D G3DSA:3.40.50.980 21 171 5.0E-22 T 22-04-2016 VP0933 138d456dfdc8c6dd4e0fff258aa992d8 480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 22-04-2016 IPR020845 AMP-binding, conserved site VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.9E-14 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 SUPERFAMILY SSF54862 37 173 9.43E-31 T 22-04-2016 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 PIRSF PIRSF005784 3 188 4.8E-87 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 43.331 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 Gene3D G3DSA:3.30.70.20 120 175 5.4E-17 T 22-04-2016 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 7.2E-18 T 22-04-2016 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 PANTHER PTHR11938:SF64 1 183 1.5E-94 T 22-04-2016 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 1.8E-87 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 PANTHER PTHR11938 1 183 1.5E-94 T 22-04-2016 VP2103 9672446e5b09e0a5effd7972ed8b3d90 198 Gene3D G3DSA:1.10.1060.10 41 119 4.1E-6 T 22-04-2016 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:3.40.50.620 11 227 1.7E-82 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 PANTHER PTHR11766 4 395 8.7E-235 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 SUPERFAMILY SSF55174 297 394 8.98E-16 T 22-04-2016 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 1.3E-79 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.308 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:1.10.240.10 228 326 1.0E-37 T 22-04-2016 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 PANTHER PTHR11766:SF1 4 395 8.7E-235 T 22-04-2016 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 SUPERFAMILY SSF52374 6 316 1.08E-98 T 22-04-2016 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:3.10.290.10 327 393 1.9E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VP2470 8b831f9a2af327bbe3be08119cb9dfe3 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 1.1E-126 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 SUPERFAMILY SSF82866 289 490 5.36E-41 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 Gene3D G3DSA:3.30.2090.10 185 263 3.6E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 SUPERFAMILY SSF82714 711 793 6.28E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 PANTHER PTHR32063:SF31 1 1029 0.0 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 SUPERFAMILY SSF82693 267 325 1.26E-12 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 SUPERFAMILY SSF82693 142 181 1.26E-12 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 SUPERFAMILY SSF82714 184 263 2.09E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 Gene3D G3DSA:3.30.2090.10 712 792 4.8E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 PANTHER PTHR32063 1 1029 0.0 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.2E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 Gene3D G3DSA:1.20.1640.10 284 500 3.6E-51 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 Pfam PF00873 AcrB/AcrD/AcrF family 5 1026 4.5E-174 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 Gene3D G3DSA:1.10.3850.10 800 1026 6.3E-57 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 SUPERFAMILY SSF82693 41 133 2.62E-23 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 SUPERFAMILY SSF82866 793 1029 3.14E-49 T 22-04-2016 VP2472 3923536bf575a09aa9a8ab5f9f6a8b72 1043 Gene3D G3DSA:3.30.70.1430 41 137 1.8E-25 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 PANTHER PTHR10133 6 288 0.0 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 PANTHER PTHR10133 318 930 0.0 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.5E-28 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VP0107 6569d3a28700ff87714b069750553553 931 SUPERFAMILY SSF47807 171 291 6.58E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VP0107 6569d3a28700ff87714b069750553553 931 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.4E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VP0107 6569d3a28700ff87714b069750553553 931 Pfam PF00476 DNA polymerase family A 553 928 4.2E-158 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 SUPERFAMILY SSF88723 7 170 8.59E-58 T 22-04-2016 IPR029060 PIN domain-like VP0107 6569d3a28700ff87714b069750553553 931 Gene3D G3DSA:1.20.1060.10 545 665 2.6E-39 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 SMART SM00279 173 208 1.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VP0107 6569d3a28700ff87714b069750553553 931 SUPERFAMILY SSF56672 524 931 2.11E-160 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 Gene3D G3DSA:3.30.420.10 331 544 3.5E-85 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0107 6569d3a28700ff87714b069750553553 931 Gene3D G3DSA:3.40.50.1010 8 186 1.4E-73 T 22-04-2016 IPR029060 PIN domain-like VP0107 6569d3a28700ff87714b069750553553 931 PANTHER PTHR10133:SF27 6 288 0.0 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 PANTHER PTHR10133:SF27 318 930 0.0 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 Pfam PF01612 3'-5' exonuclease 332 516 1.7E-39 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VP0107 6569d3a28700ff87714b069750553553 931 SMART SM00474 332 519 2.5E-41 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VP0107 6569d3a28700ff87714b069750553553 931 TIGRFAM TIGR00593 pola: DNA polymerase I 9 931 4.6E-287 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 SMART SM00482 688 895 8.4E-116 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 Gene3D G3DSA:1.10.150.20 714 820 7.1E-36 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 Gene3D G3DSA:3.30.70.370 821 931 7.9E-66 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 Gene3D G3DSA:3.30.70.370 666 713 7.9E-66 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 878 891 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 3.2E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0107 6569d3a28700ff87714b069750553553 931 SMART SM00475 7 267 6.2E-122 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VP0107 6569d3a28700ff87714b069750553553 931 SUPERFAMILY SSF53098 335 520 7.17E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0107 6569d3a28700ff87714b069750553553 931 Gene3D G3DSA:1.10.150.20 187 253 1.3E-25 T 22-04-2016 VP0107 6569d3a28700ff87714b069750553553 931 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP3002 7ba05d32130f05a911522b9202955d5a 437 SUPERFAMILY SSF52540 85 363 1.57E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3002 7ba05d32130f05a911522b9202955d5a 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VP3002 7ba05d32130f05a911522b9202955d5a 437 Gene3D G3DSA:3.40.50.300 7 223 7.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3002 7ba05d32130f05a911522b9202955d5a 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 2.4E-45 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP3002 7ba05d32130f05a911522b9202955d5a 437 SMART SM00490 270 351 1.2E-32 T 22-04-2016 IPR001650 Helicase, C-terminal VP3002 7ba05d32130f05a911522b9202955d5a 437 Gene3D G3DSA:3.40.50.300 224 380 1.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3002 7ba05d32130f05a911522b9202955d5a 437 SMART SM00487 28 234 1.4E-53 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP3002 7ba05d32130f05a911522b9202955d5a 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.8E-30 T 22-04-2016 IPR001650 Helicase, C-terminal VP3002 7ba05d32130f05a911522b9202955d5a 437 PANTHER PTHR24031:SF173 1 430 6.0E-282 T 22-04-2016 VP3002 7ba05d32130f05a911522b9202955d5a 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.667 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VP3002 7ba05d32130f05a911522b9202955d5a 437 PANTHER PTHR24031 1 430 6.0E-282 T 22-04-2016 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 209 269 3.7E-22 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 Gene3D G3DSA:3.30.460.10 33 181 9.5E-50 T 22-04-2016 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 452 3.7E-162 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 Pfam PF01743 Poly A polymerase head domain 52 182 2.0E-39 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 SUPERFAMILY SSF81301 24 179 3.38E-40 T 22-04-2016 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 PANTHER PTHR13734:SF47 16 324 8.1E-127 T 22-04-2016 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 PANTHER PTHR13734 16 324 8.1E-127 T 22-04-2016 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 8 452 37.755 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 SUPERFAMILY SSF81891 180 417 2.49E-48 T 22-04-2016 VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 328 445 3.1E-37 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain VP2504 e25e0e5d2372303d125b6d3f5903fc0f 453 Gene3D G3DSA:1.10.3090.10 182 417 1.1E-47 T 22-04-2016 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 Pfam PF08245 Mur ligase middle domain 108 291 8.5E-22 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.306 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 3.1E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 SUPERFAMILY SSF53623 97 308 3.53E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 PANTHER PTHR23135:SF17 1 450 1.8E-296 T 22-04-2016 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 SUPERFAMILY SSF53244 311 448 5.76E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 Gene3D G3DSA:3.90.190.20 313 449 9.0E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 PANTHER PTHR23135 1 450 1.8E-296 T 22-04-2016 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 SUPERFAMILY SSF51984 1 89 1.31E-22 T 22-04-2016 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 Gene3D G3DSA:3.40.50.720 1 90 1.3E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 4.0E-260 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 3.7E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0314 a28da05b9d1c5c959318c5b8e9c3f979 452 Gene3D G3DSA:3.40.1190.10 92 312 7.0E-87 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP2309 f9367b699e56fd136055aef672bb63b6 166 Gene3D G3DSA:3.30.910.20 14 60 4.1E-32 T 22-04-2016 VP2309 f9367b699e56fd136055aef672bb63b6 166 Gene3D G3DSA:3.30.910.20 98 166 4.1E-32 T 22-04-2016 VP2309 f9367b699e56fd136055aef672bb63b6 166 PANTHER PTHR35089:SF1 1 165 8.3E-46 T 22-04-2016 VP2309 f9367b699e56fd136055aef672bb63b6 166 PANTHER PTHR35089 1 165 8.3E-46 T 22-04-2016 VP2309 f9367b699e56fd136055aef672bb63b6 166 PIRSF PIRSF002094 1 166 4.6E-41 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VP2309 f9367b699e56fd136055aef672bb63b6 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 165 5.1E-27 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VP2309 f9367b699e56fd136055aef672bb63b6 166 SUPERFAMILY SSF111384 23 166 1.57E-31 T 22-04-2016 IPR024930 Skp domain VP2309 f9367b699e56fd136055aef672bb63b6 166 SMART SM00935 12 166 9.1E-43 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PRINTS PR00143 Citrate synthase signature 203 231 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PRINTS PR00143 Citrate synthase signature 130 143 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PRINTS PR00143 Citrate synthase signature 333 347 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PRINTS PR00143 Citrate synthase signature 313 329 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PRINTS PR00143 Citrate synthase signature 181 196 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PRINTS PR00143 Citrate synthase signature 256 276 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PANTHER PTHR11739:SF4 15 380 1.7E-148 T 22-04-2016 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.6E-111 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 Gene3D G3DSA:1.10.580.10 21 242 4.2E-73 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PIRSF PIRSF001369 8 380 1.5E-115 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 SUPERFAMILY SSF48256 14 380 1.27E-122 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 PANTHER PTHR11739 15 380 1.7E-148 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 8.9E-160 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VP1647 728b6fd3d8b9d6c4dea1d2863d5daf97 380 Gene3D G3DSA:1.10.230.10 243 327 1.4E-30 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VP1719 60a0a62281ef990f8338e292cdd0ba07 474 SUPERFAMILY SSF53633 5 306 1.7E-55 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP1719 60a0a62281ef990f8338e292cdd0ba07 474 PANTHER PTHR21499 1 472 1.0E-75 T 22-04-2016 VP1719 60a0a62281ef990f8338e292cdd0ba07 474 Gene3D G3DSA:3.40.1160.10 126 306 5.4E-25 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP1719 60a0a62281ef990f8338e292cdd0ba07 474 Gene3D G3DSA:3.40.1160.10 3 49 5.4E-25 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP1719 60a0a62281ef990f8338e292cdd0ba07 474 SUPERFAMILY SSF55021 398 462 1.76E-8 T 22-04-2016 VP1719 60a0a62281ef990f8338e292cdd0ba07 474 Pfam PF00696 Amino acid kinase family 4 293 1.0E-22 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP1719 60a0a62281ef990f8338e292cdd0ba07 474 PANTHER PTHR21499:SF3 1 472 1.0E-75 T 22-04-2016 VP1044 5acb8d64d62cda6378f96b891e3035c7 323 PANTHER PTHR10108:SF847 53 322 4.9E-134 T 22-04-2016 VP1044 5acb8d64d62cda6378f96b891e3035c7 323 SUPERFAMILY SSF53335 91 323 1.94E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1044 5acb8d64d62cda6378f96b891e3035c7 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 3.1E-173 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like VP1044 5acb8d64d62cda6378f96b891e3035c7 323 Gene3D G3DSA:3.40.50.150 96 311 1.0E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1044 5acb8d64d62cda6378f96b891e3035c7 323 PANTHER PTHR10108 53 322 4.9E-134 T 22-04-2016 VP1044 5acb8d64d62cda6378f96b891e3035c7 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 13 322 54.537 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VP1044 5acb8d64d62cda6378f96b891e3035c7 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.3E-147 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VP0004 cd50dabc3bb6f48e6de8f83299440939 118 SUPERFAMILY SSF54211 4 114 1.82E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0004 cd50dabc3bb6f48e6de8f83299440939 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 3.0E-46 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VP0004 cd50dabc3bb6f48e6de8f83299440939 118 Gene3D G3DSA:3.30.230.10 4 113 8.1E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0004 cd50dabc3bb6f48e6de8f83299440939 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 1.1E-28 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VP0004 cd50dabc3bb6f48e6de8f83299440939 118 Pfam PF00825 Ribonuclease P 6 112 1.8E-32 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VP0004 cd50dabc3bb6f48e6de8f83299440939 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 VP0004 cd50dabc3bb6f48e6de8f83299440939 118 PANTHER PTHR33992 2 114 5.8E-40 T 22-04-2016 VP0004 cd50dabc3bb6f48e6de8f83299440939 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.434 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VP2545 6675e20f20dc23cfd5b9d8973a793fde 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 1.0E-20 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VP2545 6675e20f20dc23cfd5b9d8973a793fde 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.425 T 22-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VP2545 6675e20f20dc23cfd5b9d8973a793fde 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 2.6E-19 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VPA1606 47f8eea3842003987939a746a652382e 102 Gene3D G3DSA:3.30.450.40 1 101 8.5E-39 T 22-04-2016 IPR029016 GAF domain-like VPA1606 47f8eea3842003987939a746a652382e 102 SUPERFAMILY SSF55781 1 101 3.89E-33 T 22-04-2016 IPR029016 GAF domain-like VPA1606 47f8eea3842003987939a746a652382e 102 PANTHER PTHR21021:SF15 1 98 1.1E-44 T 22-04-2016 VPA1606 47f8eea3842003987939a746a652382e 102 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 47 64 - T 22-04-2016 IPR000614 Free Met sulfoxide reductase conserved site VPA1606 47f8eea3842003987939a746a652382e 102 Pfam PF13185 GAF domain 16 101 5.5E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 VPA1606 47f8eea3842003987939a746a652382e 102 PANTHER PTHR21021 1 98 1.1E-44 T 22-04-2016 VP3007 e37692804496561629cbefda9bbd0ba7 611 SMART SM00341 533 611 2.1E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VP3007 e37692804496561629cbefda9bbd0ba7 611 SMART SM00956 414 517 8.9E-51 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VP3007 e37692804496561629cbefda9bbd0ba7 611 SUPERFAMILY SSF52540 17 204 1.95E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3007 e37692804496561629cbefda9bbd0ba7 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VP3007 e37692804496561629cbefda9bbd0ba7 611 Gene3D G3DSA:1.10.10.10 348 517 2.6E-63 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP3007 e37692804496561629cbefda9bbd0ba7 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.5E-253 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VP3007 e37692804496561629cbefda9bbd0ba7 611 PANTHER PTHR13710 17 610 4.4E-298 T 22-04-2016 VP3007 e37692804496561629cbefda9bbd0ba7 611 Gene3D G3DSA:3.40.50.300 210 347 6.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3007 e37692804496561629cbefda9bbd0ba7 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VP3007 e37692804496561629cbefda9bbd0ba7 611 Pfam PF00271 Helicase conserved C-terminal domain 228 334 1.1E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VP3007 e37692804496561629cbefda9bbd0ba7 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 1.4E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP3007 e37692804496561629cbefda9bbd0ba7 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 8.9E-190 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VP3007 e37692804496561629cbefda9bbd0ba7 611 Gene3D G3DSA:3.40.50.300 18 205 3.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3007 e37692804496561629cbefda9bbd0ba7 611 Pfam PF09382 RQC domain 409 517 6.0E-37 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VP3007 e37692804496561629cbefda9bbd0ba7 611 PANTHER PTHR13710:SF81 17 610 4.4E-298 T 22-04-2016 VP3007 e37692804496561629cbefda9bbd0ba7 611 SMART SM00487 25 221 4.8E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP3007 e37692804496561629cbefda9bbd0ba7 611 Gene3D G3DSA:1.10.150.80 534 606 6.1E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VP3007 e37692804496561629cbefda9bbd0ba7 611 SUPERFAMILY SSF52540 211 459 1.36E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3007 e37692804496561629cbefda9bbd0ba7 611 SMART SM00490 253 334 9.3E-29 T 22-04-2016 IPR001650 Helicase, C-terminal VP3007 e37692804496561629cbefda9bbd0ba7 611 Pfam PF16124 RecQ zinc-binding 346 407 2.8E-18 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 Gene3D G3DSA:1.10.760.10 52 193 3.8E-49 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 PANTHER PTHR30600:SF7 33 330 2.9E-117 T 22-04-2016 VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 PIRSF PIRSF000294 14 344 1.0E-124 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 Gene3D G3DSA:1.10.760.10 194 332 7.7E-47 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 Pfam PF00034 Cytochrome c 211 320 1.4E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 PANTHER PTHR30600 33 330 2.9E-117 T 22-04-2016 VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 SUPERFAMILY SSF46626 189 340 1.86E-42 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 Pfam PF03150 Di-haem cytochrome c peroxidase 55 202 7.3E-50 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VP1718 8750d63b2cc8e6c8bf74fc5a43b943ad 344 SUPERFAMILY SSF46626 43 190 2.12E-48 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0692 d5a435937e46734dfc50eb77c35ac110 306 PANTHER PTHR30537 1 298 2.7E-149 T 22-04-2016 VP0692 d5a435937e46734dfc50eb77c35ac110 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0692 d5a435937e46734dfc50eb77c35ac110 306 SUPERFAMILY SSF53850 92 296 1.57E-38 T 22-04-2016 VP0692 d5a435937e46734dfc50eb77c35ac110 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0692 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:1.10.10.10 1 86 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0692 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:3.40.190.10 94 179 6.6E-34 T 22-04-2016 VP0692 d5a435937e46734dfc50eb77c35ac110 306 PANTHER PTHR30537:SF26 1 298 2.7E-149 T 22-04-2016 VP0692 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0692 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0692 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0692 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:3.40.190.10 180 259 7.4E-15 T 22-04-2016 VP0692 d5a435937e46734dfc50eb77c35ac110 306 Pfam PF03466 LysR substrate binding domain 91 291 2.7E-37 T 22-04-2016 IPR005119 LysR, substrate-binding VP2670 87444eb2916550855702218988415b76 488 PANTHER PTHR32248:SF4 1 488 3.7E-177 T 22-04-2016 VP2670 87444eb2916550855702218988415b76 488 Pfam PF04552 Sigma-54, DNA binding domain 328 486 3.7E-72 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding VP2670 87444eb2916550855702218988415b76 488 Pfam PF04963 Sigma-54 factor, core binding domain 127 316 4.9E-61 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 VP2670 87444eb2916550855702218988415b76 488 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 485 8.2E-158 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2670 87444eb2916550855702218988415b76 488 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 466 473 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2670 87444eb2916550855702218988415b76 488 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 2.1E-17 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2670 87444eb2916550855702218988415b76 488 PIRSF PIRSF000774 1 488 3.7E-152 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2670 87444eb2916550855702218988415b76 488 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 375 394 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2670 87444eb2916550855702218988415b76 488 PANTHER PTHR32248 1 488 3.7E-177 T 22-04-2016 VP2670 87444eb2916550855702218988415b76 488 PRINTS PR00045 Sigma-54 factor signature 403 414 7.62E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2670 87444eb2916550855702218988415b76 488 PRINTS PR00045 Sigma-54 factor signature 387 399 7.62E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2670 87444eb2916550855702218988415b76 488 PRINTS PR00045 Sigma-54 factor signature 199 216 7.62E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2670 87444eb2916550855702218988415b76 488 PRINTS PR00045 Sigma-54 factor signature 461 479 7.62E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP0014 d5ffb1789493e61d02f6e707659f0420 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 107.795 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 Pfam PF00204 DNA gyrase B 221 391 1.4E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 794 1.9E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PANTHER PTHR10169 725 805 0.0 T 22-04-2016 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PANTHER PTHR10169 1 554 0.0 T 22-04-2016 VP0014 d5ffb1789493e61d02f6e707659f0420 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 SUPERFAMILY SSF55874 4 212 2.88E-75 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0014 d5ffb1789493e61d02f6e707659f0420 805 Pfam PF01751 Toprim domain 420 532 8.3E-19 T 22-04-2016 IPR006171 Toprim domain VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 SMART SM00433 35 798 1.5E-273 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 SMART SM00387 31 175 2.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0014 d5ffb1789493e61d02f6e707659f0420 805 SUPERFAMILY SSF54211 221 393 1.1E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0014 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.30.565.10 15 214 1.1E-93 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0014 d5ffb1789493e61d02f6e707659f0420 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 7.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0014 d5ffb1789493e61d02f6e707659f0420 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.40.50.670 405 551 7.9E-102 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.40.50.670 719 787 7.9E-102 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0014 d5ffb1789493e61d02f6e707659f0420 805 SUPERFAMILY SSF56719 395 561 1.07E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VP0014 d5ffb1789493e61d02f6e707659f0420 805 SUPERFAMILY SSF56719 731 796 1.07E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VP0014 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.30.230.10 220 393 1.7E-75 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0467 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.0E-66 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.082 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP0467 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF02810 SEC-C motif 888 906 1.7E-10 T 22-04-2016 IPR004027 SEC-C motif VP0467 265ea90d24455f825a11d5bd63a3101f 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP0467 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF81886 884 896 1.06E-83 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF81886 620 840 1.06E-83 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF07517 SecA DEAD-like domain 7 403 7.5E-134 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 ProSitePatterns PS01312 SecA family signature. 501 516 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VP0467 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:1.10.3060.10 648 831 1.1E-58 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 SMART SM00957 6 403 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PANTHER PTHR30612 551 908 0.0 T 22-04-2016 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PANTHER PTHR30612 1 521 0.0 T 22-04-2016 VP0467 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF52540 418 610 4.29E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0467 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF01043 SecA preprotein cross-linking domain 232 359 1.5E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.90.1440.10 230 369 2.3E-46 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.40.50.300 2 228 5.0E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0467 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.40.50.300 370 417 5.0E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0467 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF81767 227 369 1.16E-42 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF52540 369 416 2.56E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0467 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF52540 5 228 2.56E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0467 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.40.50.300 418 619 2.6E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0467 265ea90d24455f825a11d5bd63a3101f 908 SMART SM00958 228 359 2.8E-82 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 340 362 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 170 190 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 63 87 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 101 115 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 414 427 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 117 127 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP0467 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 377 394 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VP1441 918a9b08fb97b0bd8704709ccee938d1 513 SMART SM00267 346 512 6.3E-38 T 22-04-2016 IPR000160 GGDEF domain VP1441 918a9b08fb97b0bd8704709ccee938d1 513 Pfam PF03924 CHASE domain 84 272 1.1E-25 T 22-04-2016 IPR006189 CHASE domain VP1441 918a9b08fb97b0bd8704709ccee938d1 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 511 2.0E-34 T 22-04-2016 IPR000160 GGDEF domain VP1441 918a9b08fb97b0bd8704709ccee938d1 513 PANTHER PTHR10799 386 507 2.5E-14 T 22-04-2016 VP1441 918a9b08fb97b0bd8704709ccee938d1 513 PANTHER PTHR10799 219 366 2.5E-14 T 22-04-2016 VP1441 918a9b08fb97b0bd8704709ccee938d1 513 SMART SM01079 78 274 1.5E-32 T 22-04-2016 IPR006189 CHASE domain VP1441 918a9b08fb97b0bd8704709ccee938d1 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 508 8.5E-34 T 22-04-2016 IPR000160 GGDEF domain VP1441 918a9b08fb97b0bd8704709ccee938d1 513 SUPERFAMILY SSF55073 362 511 7.45E-38 T 22-04-2016 IPR029787 Nucleotide cyclase VP1441 918a9b08fb97b0bd8704709ccee938d1 513 PANTHER PTHR10799:SF774 386 507 2.5E-14 T 22-04-2016 VP1441 918a9b08fb97b0bd8704709ccee938d1 513 PANTHER PTHR10799:SF774 219 366 2.5E-14 T 22-04-2016 VP1441 918a9b08fb97b0bd8704709ccee938d1 513 Gene3D G3DSA:3.30.70.270 359 511 1.8E-41 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 SUPERFAMILY SSF103190 207 298 1.02E-25 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VP0354 2d6c60ab49471f8824486c063853c6a5 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 1.3E-13 T 22-04-2016 IPR000014 PAS domain VP0354 2d6c60ab49471f8824486c063853c6a5 626 SUPERFAMILY SSF103190 36 206 7.3E-48 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VP0354 2d6c60ab49471f8824486c063853c6a5 626 Gene3D G3DSA:3.30.450.20 73 204 5.4E-43 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 PANTHER PTHR10799 10 33 4.8E-19 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 PANTHER PTHR10799 500 616 4.8E-19 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 Gene3D G3DSA:3.30.450.20 346 455 3.0E-15 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 Gene3D G3DSA:1.20.5.170 26 72 7.2E-28 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 SUPERFAMILY SSF55785 352 462 3.59E-19 T 22-04-2016 IPR000014 PAS domain VP0354 2d6c60ab49471f8824486c063853c6a5 626 Gene3D G3DSA:3.30.450.20 207 301 3.6E-29 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 614 1.8E-34 T 22-04-2016 IPR000160 GGDEF domain VP0354 2d6c60ab49471f8824486c063853c6a5 626 Gene3D G3DSA:3.30.70.270 467 620 2.3E-41 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 Pfam PF02743 Cache domain 38 289 1.2E-14 T 22-04-2016 IPR033479 Double Cache domain 1 VP0354 2d6c60ab49471f8824486c063853c6a5 626 PANTHER PTHR10799:SF750 10 33 4.8E-19 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 Pfam PF13426 PAS domain 352 453 4.3E-10 T 22-04-2016 IPR000014 PAS domain VP0354 2d6c60ab49471f8824486c063853c6a5 626 PANTHER PTHR10799:SF750 500 616 4.8E-19 T 22-04-2016 VP0354 2d6c60ab49471f8824486c063853c6a5 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 9.4E-38 T 22-04-2016 IPR000160 GGDEF domain VP0354 2d6c60ab49471f8824486c063853c6a5 626 SMART SM00267 454 619 8.1E-46 T 22-04-2016 IPR000160 GGDEF domain VP0354 2d6c60ab49471f8824486c063853c6a5 626 SUPERFAMILY SSF55073 470 618 5.1E-38 T 22-04-2016 IPR029787 Nucleotide cyclase VP0266 c15f837e88612bc3571fe866ebb65f44 84 Pfam PF00366 Ribosomal protein S17 10 77 7.9E-35 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 PANTHER PTHR10744 6 82 5.7E-44 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.214 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.4E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.4E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.4E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 Gene3D G3DSA:2.40.50.140 5 82 3.4E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0266 c15f837e88612bc3571fe866ebb65f44 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 2.1E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 3.0E-37 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0266 c15f837e88612bc3571fe866ebb65f44 84 SUPERFAMILY SSF50249 6 83 5.57E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 SMART SM01134 73 234 2.4E-58 T 22-04-2016 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 Gene3D G3DSA:3.40.50.1360 76 217 7.5E-16 T 22-04-2016 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.0E-45 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 SMART SM00420 9 61 7.3E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 SUPERFAMILY SSF100950 78 234 2.18E-31 T 22-04-2016 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 PANTHER PTHR30363 3 253 2.4E-143 T 22-04-2016 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 PANTHER PTHR30363:SF15 3 253 2.4E-143 T 22-04-2016 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 Gene3D G3DSA:1.10.10.10 5 51 5.9E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 SUPERFAMILY SSF46785 3 67 4.69E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0358 8a43597352607ff4c01ddbfdcbaa573a 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.9E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55021 383 476 7.45E-22 T 22-04-2016 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF53633 1 298 3.33E-77 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF00742 Homoserine dehydrogenase 614 810 6.6E-47 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.30.360.10 636 791 2.5E-54 T 22-04-2016 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55347 614 797 3.6E-51 T 22-04-2016 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 PIRSF PIRSF000727 1 817 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55021 303 381 1.32E-22 T 22-04-2016 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 PANTHER PTHR21499 1 471 8.7E-179 T 22-04-2016 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF01842 ACT domain 324 379 1.4E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF13840 ACT domain 394 456 2.7E-7 T 22-04-2016 IPR027795 GATS-like ACT domain VP0494 4ae43e99149ece3f6e7f743c75066dea 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 5.4E-132 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.40.50.720 466 635 8.7E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF00696 Amino acid kinase family 2 284 1.2E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF51735 465 636 3.94E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0494 4ae43e99149ece3f6e7f743c75066dea 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 PANTHER PTHR21499:SF1 1 471 8.7E-179 T 22-04-2016 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 2.6E-27 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.40.1160.10 1 49 9.8E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP0494 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.40.1160.10 111 299 9.8E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2108 372723b50e9d2ab701662cb72d265563 213 PIRSF PIRSF001435 1 211 4.6E-50 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VP2108 372723b50e9d2ab701662cb72d265563 213 SMART SM00525 186 206 6.5E-6 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VP2108 372723b50e9d2ab701662cb72d265563 213 PANTHER PTHR10359 1 212 1.1E-91 T 22-04-2016 VP2108 372723b50e9d2ab701662cb72d265563 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.217 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VP2108 372723b50e9d2ab701662cb72d265563 213 Gene3D G3DSA:1.10.340.30 23 122 2.3E-33 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VP2108 372723b50e9d2ab701662cb72d265563 213 SMART SM00478 38 185 5.7E-56 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VP2108 372723b50e9d2ab701662cb72d265563 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 VP2108 372723b50e9d2ab701662cb72d265563 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 6.0E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VP2108 372723b50e9d2ab701662cb72d265563 213 Gene3D G3DSA:1.10.1670.10 123 208 3.2E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VP2108 372723b50e9d2ab701662cb72d265563 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.1E-88 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VP2108 372723b50e9d2ab701662cb72d265563 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.6E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VP2108 372723b50e9d2ab701662cb72d265563 213 PANTHER PTHR10359:SF18 1 212 1.1E-91 T 22-04-2016 VP2108 372723b50e9d2ab701662cb72d265563 213 SUPERFAMILY SSF48150 2 207 3.3E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VP2108 372723b50e9d2ab701662cb72d265563 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.2E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VP2108 372723b50e9d2ab701662cb72d265563 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VP2437 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF07670 Nucleoside recognition 99 195 1.1E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VP2437 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 9.5E-27 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VP2437 421b6af25ca2cd328982fa90e2852d01 427 PANTHER PTHR10590 4 420 2.5E-217 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VP2437 421b6af25ca2cd328982fa90e2852d01 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 5.7E-155 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VP2437 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 3.0E-74 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VP2017 dc74f8ce33385daf29ec72d172c93e01 443 Gene3D G3DSA:1.10.1130.10 7 44 8.8E-6 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain VP2017 dc74f8ce33385daf29ec72d172c93e01 443 Gene3D G3DSA:1.10.1130.10 221 255 8.8E-6 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain VP2017 dc74f8ce33385daf29ec72d172c93e01 443 Pfam PF04403 Paraquat-inducible protein A 265 422 9.1E-54 T 22-04-2016 IPR007498 Paraquat-inducible protein A VP2017 dc74f8ce33385daf29ec72d172c93e01 443 Pfam PF04403 Paraquat-inducible protein A 49 208 8.0E-39 T 22-04-2016 IPR007498 Paraquat-inducible protein A VP2017 dc74f8ce33385daf29ec72d172c93e01 443 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 8 422 1.1E-104 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 VP2017 dc74f8ce33385daf29ec72d172c93e01 443 PANTHER PTHR30462 1 430 1.5E-188 T 22-04-2016 VP2017 dc74f8ce33385daf29ec72d172c93e01 443 PANTHER PTHR30462:SF3 1 430 1.5E-188 T 22-04-2016 VP2238 fc5181b521cd6171871ed345ab7d2fac 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.2E-32 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VP2238 fc5181b521cd6171871ed345ab7d2fac 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.1E-28 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP2238 fc5181b521cd6171871ed345ab7d2fac 89 PANTHER PTHR34040 1 89 6.0E-37 T 22-04-2016 VP2238 fc5181b521cd6171871ed345ab7d2fac 89 PIRSF PIRSF004669 1 89 1.0E-29 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP2238 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP2238 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP2238 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP2238 fc5181b521cd6171871ed345ab7d2fac 89 PANTHER PTHR34040:SF2 1 89 6.0E-37 T 22-04-2016 VP2167 3bb5e16dfa2c1550c98f55968d8dd716 94 PANTHER PTHR33336 1 94 2.1E-21 T 22-04-2016 VP2167 3bb5e16dfa2c1550c98f55968d8dd716 94 PANTHER PTHR33336:SF5 1 94 2.1E-21 T 22-04-2016 VP2167 3bb5e16dfa2c1550c98f55968d8dd716 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 3.4E-19 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VP2167 3bb5e16dfa2c1550c98f55968d8dd716 94 SUPERFAMILY SSF54909 1 93 1.16E-27 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP2167 3bb5e16dfa2c1550c98f55968d8dd716 94 Gene3D G3DSA:3.30.70.900 1 93 2.0E-30 T 22-04-2016 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:1.10.1780.10 1 148 1.3E-45 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.8E-57 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:1.10.8.60 343 428 5.9E-37 T 22-04-2016 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 SMART SM00382 597 767 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 SMART SM00382 198 344 3.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 SUPERFAMILY SSF52540 159 545 4.2E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:1.10.8.60 778 853 1.5E-31 T 22-04-2016 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 1.7E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.9E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 7.3E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:3.40.50.300 550 777 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 SUPERFAMILY SSF52540 546 852 1.24E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 PANTHER PTHR11638:SF18 1 853 0.0 T 22-04-2016 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 PANTHER PTHR11638 1 853 0.0 T 22-04-2016 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:3.40.50.300 160 342 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 SMART SM01086 766 855 7.9E-37 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.5E-28 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP0561 f838d42aa9d53ff06b0cf3f226b68cae 857 SUPERFAMILY SSF81923 4 156 1.08E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP1717 eaf35a34fb9f7c353cd3f39ecba7defa 383 PANTHER PTHR30294 1 374 2.2E-142 T 22-04-2016 VP1717 eaf35a34fb9f7c353cd3f39ecba7defa 383 PANTHER PTHR30294:SF2 1 374 2.2E-142 T 22-04-2016 VP1717 eaf35a34fb9f7c353cd3f39ecba7defa 383 Pfam PF12698 ABC-2 family transporter protein 22 367 2.2E-40 T 22-04-2016 VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 Pfam PF01938 TRAM domain 17 68 6.0E-8 T 22-04-2016 IPR002792 TRAM domain VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 Gene3D G3DSA:2.40.50.140 8 88 7.4E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 PANTHER PTHR11061:SF30 6 438 1.3E-134 T 22-04-2016 VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 SUPERFAMILY SSF53335 77 438 3.32E-87 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 64.39 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 PANTHER PTHR11061 6 438 1.3E-134 T 22-04-2016 VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 3.2E-130 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 1.2E-34 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 Gene3D G3DSA:3.40.50.150 258 437 2.4E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site VP2566 c7f9b5cb3e34d5aeadc50614870956d2 439 SUPERFAMILY SSF50249 18 74 3.43E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1945 9225d5e0ead0746171d601be346cdb29 214 PANTHER PTHR26402 2 214 4.1E-110 T 22-04-2016 VP1945 9225d5e0ead0746171d601be346cdb29 214 SMART SM00448 2 115 8.3E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1945 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1945 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1945 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1945 9225d5e0ead0746171d601be346cdb29 214 PANTHER PTHR26402:SF506 2 214 4.1E-110 T 22-04-2016 VP1945 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF46894 136 210 1.39E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP1945 9225d5e0ead0746171d601be346cdb29 214 SMART SM00421 146 203 2.0E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1945 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:3.40.50.2300 2 120 2.3E-34 T 22-04-2016 VP1945 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:1.10.10.10 121 211 2.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1945 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00072 Response regulator receiver domain 4 116 3.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1945 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 7.5E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1945 9225d5e0ead0746171d601be346cdb29 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1945 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF52172 2 132 1.18E-33 T 22-04-2016 IPR011006 CheY-like superfamily VP2598 214333aac87f1e38592f9526aa0565e3 288 Pfam PF05552 Conserved TM helix 21 69 8.6E-13 T 22-04-2016 IPR008910 Conserved TM helix VP2598 214333aac87f1e38592f9526aa0565e3 288 Pfam PF00924 Mechanosensitive ion channel 77 274 1.7E-58 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VP2598 214333aac87f1e38592f9526aa0565e3 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VP2598 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF82861 33 118 1.31E-17 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VP2598 214333aac87f1e38592f9526aa0565e3 288 PANTHER PTHR30221 20 288 4.8E-113 T 22-04-2016 VP2598 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 22-04-2016 IPR010920 LSM domain VP2598 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF82689 187 284 4.18E-34 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VP2598 214333aac87f1e38592f9526aa0565e3 288 Gene3D G3DSA:3.30.70.100 189 272 1.6E-30 T 22-04-2016 VP2598 214333aac87f1e38592f9526aa0565e3 288 PANTHER PTHR30221:SF7 20 288 4.8E-113 T 22-04-2016 VP2598 214333aac87f1e38592f9526aa0565e3 288 Gene3D G3DSA:2.30.30.60 135 184 2.2E-20 T 22-04-2016 VP2643 e9c06b87a7d11875005bc90eff05a4f2 366 PANTHER PTHR33529:SF2 2 366 1.0E-116 T 22-04-2016 VP2643 e9c06b87a7d11875005bc90eff05a4f2 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 2.7E-70 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VP2643 e9c06b87a7d11875005bc90eff05a4f2 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 1.6E-117 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VP2643 e9c06b87a7d11875005bc90eff05a4f2 366 PANTHER PTHR33529 2 366 1.0E-116 T 22-04-2016 VP1541 447cc7454e999af04f28219f921c22c4 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 2.9E-23 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 VP1541 447cc7454e999af04f28219f921c22c4 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 112 321 2.6E-60 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VP1541 447cc7454e999af04f28219f921c22c4 324 SUPERFAMILY SSF46626 239 321 1.25E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1541 447cc7454e999af04f28219f921c22c4 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 5.1E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VP1541 447cc7454e999af04f28219f921c22c4 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 5.1E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VP1541 447cc7454e999af04f28219f921c22c4 324 PANTHER PTHR33751:SF1 115 324 2.9E-111 T 22-04-2016 VP1541 447cc7454e999af04f28219f921c22c4 324 PANTHER PTHR33751:SF1 25 79 2.9E-111 T 22-04-2016 VP1541 447cc7454e999af04f28219f921c22c4 324 Gene3D G3DSA:1.10.760.10 245 322 1.4E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1541 447cc7454e999af04f28219f921c22c4 324 PIRSF PIRSF000006 1 322 1.2E-111 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VP1541 447cc7454e999af04f28219f921c22c4 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 240 315 1.1E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1541 447cc7454e999af04f28219f921c22c4 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 8.4E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1541 447cc7454e999af04f28219f921c22c4 324 PANTHER PTHR33751 115 324 2.9E-111 T 22-04-2016 VP1541 447cc7454e999af04f28219f921c22c4 324 PANTHER PTHR33751 25 79 2.9E-111 T 22-04-2016 VP1541 447cc7454e999af04f28219f921c22c4 324 SUPERFAMILY SSF46626 55 78 8.31E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1541 447cc7454e999af04f28219f921c22c4 324 SUPERFAMILY SSF46626 145 238 8.31E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1541 447cc7454e999af04f28219f921c22c4 324 Gene3D G3DSA:1.10.760.10 60 82 1.8E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1541 447cc7454e999af04f28219f921c22c4 324 Gene3D G3DSA:1.10.760.10 149 244 1.8E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.1E-83 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 PANTHER PTHR30034:SF0 2 344 3.9E-150 T 22-04-2016 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 Gene3D G3DSA:2.30.330.10 243 321 3.0E-9 T 22-04-2016 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 PIRSF PIRSF002888 1 328 7.6E-92 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 PANTHER PTHR30034 2 344 3.9E-150 T 22-04-2016 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 6.9E-125 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VP2242 436e6835573fa5e7b290ba1378de0ce7 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 7.4E-17 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VP2242 436e6835573fa5e7b290ba1378de0ce7 348 Gene3D G3DSA:3.40.1550.10 60 230 5.8E-6 T 22-04-2016 IPR028976 CheC-like domain VP2242 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF103039 54 230 5.49E-21 T 22-04-2016 IPR028976 CheC-like domain VP2242 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF103039 4 13 5.49E-21 T 22-04-2016 IPR028976 CheC-like domain VP2242 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF101801 247 322 1.96E-13 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VP0892 1615c6fd9216ffaa9aaa86656bc89941 456 Pfam PF13193 AMP-binding enzyme C-terminal domain 362 445 8.7E-8 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VP0892 1615c6fd9216ffaa9aaa86656bc89941 456 Gene3D G3DSA:3.30.300.30 348 453 7.8E-16 T 22-04-2016 VP0892 1615c6fd9216ffaa9aaa86656bc89941 456 Gene3D G3DSA:3.40.50.980 149 290 5.1E-9 T 22-04-2016 VP0892 1615c6fd9216ffaa9aaa86656bc89941 456 Gene3D G3DSA:3.40.50.980 8 148 1.0E-10 T 22-04-2016 VP0892 1615c6fd9216ffaa9aaa86656bc89941 456 PANTHER PTHR24095:SF195 18 447 3.5E-20 T 22-04-2016 VP0892 1615c6fd9216ffaa9aaa86656bc89941 456 SUPERFAMILY SSF56801 8 455 4.32E-55 T 22-04-2016 VP0892 1615c6fd9216ffaa9aaa86656bc89941 456 Pfam PF00501 AMP-binding enzyme 10 292 2.0E-18 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP0892 1615c6fd9216ffaa9aaa86656bc89941 456 PANTHER PTHR24095 18 447 3.5E-20 T 22-04-2016 VP0767 e10fb707463cc5a6da64a854fa606338 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 2.1E-27 T 22-04-2016 IPR032388 Flagellar assembly protein T, C-terminal VP0767 e10fb707463cc5a6da64a854fa606338 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 2.3E-26 T 22-04-2016 IPR032370 Flagellar assembly protein T, N-terminal VP0767 e10fb707463cc5a6da64a854fa606338 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 1.7E-41 T 22-04-2016 IPR032386 Flagellar assembly protein T, middle domain VP0953 df3ba4e8149bda6897c0bc79d03da983 667 SMART SM00267 500 660 3.1E-21 T 22-04-2016 IPR000160 GGDEF domain VP0953 df3ba4e8149bda6897c0bc79d03da983 667 Gene3D G3DSA:3.40.190.10 248 361 7.3E-13 T 22-04-2016 VP0953 df3ba4e8149bda6897c0bc79d03da983 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 191 2.0E-16 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0953 df3ba4e8149bda6897c0bc79d03da983 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 257 459 1.0E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0953 df3ba4e8149bda6897c0bc79d03da983 667 Gene3D G3DSA:3.40.190.10 362 415 5.2E-4 T 22-04-2016 VP0953 df3ba4e8149bda6897c0bc79d03da983 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 656 7.3E-28 T 22-04-2016 IPR000160 GGDEF domain VP0953 df3ba4e8149bda6897c0bc79d03da983 667 SMART SM00062 29 227 2.4E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0953 df3ba4e8149bda6897c0bc79d03da983 667 Gene3D G3DSA:3.40.190.10 44 125 3.1E-8 T 22-04-2016 VP0953 df3ba4e8149bda6897c0bc79d03da983 667 Gene3D G3DSA:3.40.190.10 126 185 3.2E-5 T 22-04-2016 VP0953 df3ba4e8149bda6897c0bc79d03da983 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 655 3.9E-26 T 22-04-2016 IPR000160 GGDEF domain VP0953 df3ba4e8149bda6897c0bc79d03da983 667 SUPERFAMILY SSF55073 516 656 4.87E-27 T 22-04-2016 IPR029787 Nucleotide cyclase VP0953 df3ba4e8149bda6897c0bc79d03da983 667 SUPERFAMILY SSF53850 250 460 1.02E-26 T 22-04-2016 VP0953 df3ba4e8149bda6897c0bc79d03da983 667 Gene3D G3DSA:3.30.70.270 512 656 5.2E-30 T 22-04-2016 VP0953 df3ba4e8149bda6897c0bc79d03da983 667 SUPERFAMILY SSF53850 44 200 2.18E-22 T 22-04-2016 VP2149 83d280281e75a8556c94bb99076269c7 654 Gene3D G3DSA:2.70.20.10 374 493 3.3E-44 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VP2149 83d280281e75a8556c94bb99076269c7 654 Gene3D G3DSA:2.70.20.10 219 256 3.3E-44 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VP2149 83d280281e75a8556c94bb99076269c7 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 651 64.483 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 Pfam PF01751 Toprim domain 4 132 1.2E-16 T 22-04-2016 IPR006171 Toprim domain VP2149 83d280281e75a8556c94bb99076269c7 654 Gene3D G3DSA:1.10.460.10 495 612 5.5E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VP2149 83d280281e75a8556c94bb99076269c7 654 Gene3D G3DSA:1.10.460.10 160 218 5.5E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VP2149 83d280281e75a8556c94bb99076269c7 654 SMART SM00437 284 563 9.2E-91 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 625 5.0E-240 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 PANTHER PTHR11390:SF21 1 508 6.2E-179 T 22-04-2016 VP2149 83d280281e75a8556c94bb99076269c7 654 PANTHER PTHR11390:SF21 526 611 6.2E-179 T 22-04-2016 VP2149 83d280281e75a8556c94bb99076269c7 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VP2149 83d280281e75a8556c94bb99076269c7 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 Pfam PF01131 DNA topoisomerase 159 598 2.9E-118 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 SUPERFAMILY SSF56712 3 612 1.24E-184 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VP2149 83d280281e75a8556c94bb99076269c7 654 SMART SM00436 129 224 1.1E-30 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 Gene3D G3DSA:3.40.50.140 3 154 2.2E-45 T 22-04-2016 IPR006171 Toprim domain VP2149 83d280281e75a8556c94bb99076269c7 654 SMART SM00493 2 125 3.7E-28 T 22-04-2016 IPR006171 Toprim domain VP2149 83d280281e75a8556c94bb99076269c7 654 PANTHER PTHR11390 1 508 6.2E-179 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP2149 83d280281e75a8556c94bb99076269c7 654 PANTHER PTHR11390 526 611 6.2E-179 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 6.3E-23 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.3E-115 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 PANTHER PTHR22572 79 295 1.1E-54 T 22-04-2016 VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.14 T 22-04-2016 IPR001451 Hexapeptide repeat VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 SUPERFAMILY SSF51161 32 316 3.46E-84 T 22-04-2016 IPR011004 Trimeric LpxA-like VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.5E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.8E-9 T 22-04-2016 IPR001451 Hexapeptide repeat VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 Gene3D G3DSA:2.160.10.10 140 301 2.4E-39 T 22-04-2016 VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 Gene3D G3DSA:2.160.10.10 100 139 4.2E-12 T 22-04-2016 VP2308 955aa6b6ff3cb1daf78d0bec248609c8 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.624 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VP1377 b1677b77ff661a45bdab31c820a26671 599 SMART SM00267 166 335 1.5E-7 T 22-04-2016 IPR000160 GGDEF domain VP1377 b1677b77ff661a45bdab31c820a26671 599 SUPERFAMILY SSF55785 58 168 2.09E-18 T 22-04-2016 IPR000014 PAS domain VP1377 b1677b77ff661a45bdab31c820a26671 599 Pfam PF00990 Diguanylate cyclase, GGDEF domain 177 330 3.5E-13 T 22-04-2016 IPR000160 GGDEF domain VP1377 b1677b77ff661a45bdab31c820a26671 599 Pfam PF00563 EAL domain 353 586 1.8E-64 T 22-04-2016 IPR001633 EAL domain VP1377 b1677b77ff661a45bdab31c820a26671 599 PANTHER PTHR33121:SF13 330 595 1.7E-61 T 22-04-2016 VP1377 b1677b77ff661a45bdab31c820a26671 599 SMART SM00086 126 166 4.9E-4 T 22-04-2016 IPR001610 PAC motif VP1377 b1677b77ff661a45bdab31c820a26671 599 PANTHER PTHR33121 330 595 1.7E-61 T 22-04-2016 VP1377 b1677b77ff661a45bdab31c820a26671 599 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 52 170 8.0E-13 T 22-04-2016 IPR000014 PAS domain VP1377 b1677b77ff661a45bdab31c820a26671 599 Gene3D G3DSA:3.20.20.450 349 592 1.1E-76 T 22-04-2016 IPR001633 EAL domain VP1377 b1677b77ff661a45bdab31c820a26671 599 SMART SM00091 53 119 0.001 T 22-04-2016 IPR000014 PAS domain VP1377 b1677b77ff661a45bdab31c820a26671 599 Pfam PF08447 PAS fold 76 145 2.0E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 VP1377 b1677b77ff661a45bdab31c820a26671 599 SMART SM00052 345 591 9.2E-69 T 22-04-2016 IPR001633 EAL domain VP1377 b1677b77ff661a45bdab31c820a26671 599 SUPERFAMILY SSF55073 184 337 6.98E-19 T 22-04-2016 IPR029787 Nucleotide cyclase VP1377 b1677b77ff661a45bdab31c820a26671 599 Gene3D G3DSA:3.30.450.20 49 164 1.1E-18 T 22-04-2016 VP1377 b1677b77ff661a45bdab31c820a26671 599 SUPERFAMILY SSF141868 350 593 4.97E-74 T 22-04-2016 IPR001633 EAL domain VP1377 b1677b77ff661a45bdab31c820a26671 599 Gene3D G3DSA:3.30.70.270 178 341 2.3E-19 T 22-04-2016 VP0062 847371806ea4d67db995f849c8a31df1 598 Pfam PF00920 Dehydratase family 68 594 2.2E-148 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0062 847371806ea4d67db995f849c8a31df1 598 PANTHER PTHR21000:SF9 3 597 0.0 T 22-04-2016 VP0062 847371806ea4d67db995f849c8a31df1 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0062 847371806ea4d67db995f849c8a31df1 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0062 847371806ea4d67db995f849c8a31df1 598 SUPERFAMILY SSF52016 418 596 4.47E-52 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VP0062 847371806ea4d67db995f849c8a31df1 598 PANTHER PTHR21000 3 597 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0062 847371806ea4d67db995f849c8a31df1 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 1.1E-250 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 VP0062 847371806ea4d67db995f849c8a31df1 598 SUPERFAMILY SSF143975 3 417 1.16E-131 T 22-04-2016 VP0144 8a58897d474185e0daf23e60dc018ab0 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.2E-105 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 VP0144 8a58897d474185e0daf23e60dc018ab0 275 PANTHER PTHR20854 1 273 5.1E-88 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0144 8a58897d474185e0daf23e60dc018ab0 275 PANTHER PTHR20854:SF5 1 273 5.1E-88 T 22-04-2016 VP0144 8a58897d474185e0daf23e60dc018ab0 275 Gene3D G3DSA:3.30.540.10 6 160 1.5E-44 T 22-04-2016 VP0144 8a58897d474185e0daf23e60dc018ab0 275 Gene3D G3DSA:3.40.190.80 161 263 9.6E-36 T 22-04-2016 VP0144 8a58897d474185e0daf23e60dc018ab0 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 9.0E-6 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0144 8a58897d474185e0daf23e60dc018ab0 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 9.0E-6 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0144 8a58897d474185e0daf23e60dc018ab0 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 9.0E-6 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0144 8a58897d474185e0daf23e60dc018ab0 275 SUPERFAMILY SSF56655 6 272 5.24E-77 T 22-04-2016 VP0144 8a58897d474185e0daf23e60dc018ab0 275 Pfam PF00459 Inositol monophosphatase family 7 253 3.0E-51 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 PANTHER PTHR26402:SF596 3 237 8.0E-109 T 22-04-2016 VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 SUPERFAMILY SSF46894 134 235 1.47E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 Gene3D G3DSA:3.40.50.2300 2 122 8.3E-36 T 22-04-2016 VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 SMART SM00862 158 234 3.4E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 SUPERFAMILY SSF52172 2 123 1.71E-36 T 22-04-2016 IPR011006 CheY-like superfamily VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 Gene3D G3DSA:1.10.10.10 135 235 2.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 PANTHER PTHR26402 3 237 8.0E-109 T 22-04-2016 VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.0E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP1032 113adc3ae8d269bb6202ab1d9d8df245 237 SMART SM00448 3 113 8.6E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 Gene3D G3DSA:2.40.30.10 192 272 1.2E-27 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PANTHER PTHR10617:SF103 1 289 1.9E-128 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PANTHER PTHR10617:SF103 333 397 1.9E-128 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.2E-5 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.2E-5 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 2.2E-5 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 SUPERFAMILY SSF160996 193 341 4.32E-41 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 Gene3D G3DSA:1.10.8.260 273 325 2.3E-21 T 22-04-2016 IPR023166 HI0933 insert-like domain VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PANTHER PTHR10617 1 289 1.9E-128 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PANTHER PTHR10617 333 397 1.9E-128 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 SUPERFAMILY SSF51905 1 191 4.52E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 SUPERFAMILY SSF51905 340 397 4.52E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.0E-8 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.0E-8 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-8 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 6.0E-129 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 Pfam PF03486 HI0933-like protein 5 395 3.4E-157 T 22-04-2016 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 Gene3D G3DSA:3.50.50.60 342 395 8.2E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0079 e04a35eba2121bea6ecf9f4ecca46b6f 397 Gene3D G3DSA:3.50.50.60 2 189 8.2E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0174 3e4d2c374c6624cfd4525ae010c10660 244 SMART SM00382 5 205 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0174 3e4d2c374c6624cfd4525ae010c10660 244 Pfam PF00005 ABC transporter 1 146 3.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0174 3e4d2c374c6624cfd4525ae010c10660 244 PANTHER PTHR24220 1 233 7.6E-129 T 22-04-2016 VP0174 3e4d2c374c6624cfd4525ae010c10660 244 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0174 3e4d2c374c6624cfd4525ae010c10660 244 Gene3D G3DSA:3.40.50.300 1 221 4.6E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0174 3e4d2c374c6624cfd4525ae010c10660 244 PANTHER PTHR24220:SF336 1 233 7.6E-129 T 22-04-2016 VP0174 3e4d2c374c6624cfd4525ae010c10660 244 SUPERFAMILY SSF52540 1 219 1.45E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1515 593baa14b88786142824aea648b602de 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 5.6E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VP1515 593baa14b88786142824aea648b602de 350 Gene3D G3DSA:1.20.950.20 119 334 4.9E-65 T 22-04-2016 VP1515 593baa14b88786142824aea648b602de 350 SUPERFAMILY SSF81342 119 333 9.42E-47 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VP1515 593baa14b88786142824aea648b602de 350 PANTHER PTHR30074 32 344 1.0E-153 T 22-04-2016 VP1515 593baa14b88786142824aea648b602de 350 PANTHER PTHR30074:SF2 32 344 1.0E-153 T 22-04-2016 VP1515 593baa14b88786142824aea648b602de 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 3.6E-84 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VP1744 4414a48b2296773c0829c6206a731a41 508 PANTHER PTHR34217:SF1 15 508 3.1E-246 T 22-04-2016 VP1744 4414a48b2296773c0829c6206a731a41 508 PIRSF PIRSF006615 17 508 1.5E-199 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 27 507 9.7E-95 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 PANTHER PTHR34217 15 508 3.1E-246 T 22-04-2016 VP1744 4414a48b2296773c0829c6206a731a41 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 279 298 2.3E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 306 322 2.3E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 345 364 2.3E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 259 278 2.3E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 415 436 2.3E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 163 183 2.3E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 459 477 2.3E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VP1744 4414a48b2296773c0829c6206a731a41 508 SUPERFAMILY SSF55486 17 508 1.34E-119 T 22-04-2016 VP0510 7754e912643c26a159f1ccb6df839684 262 PANTHER PTHR35272 3 261 3.9E-89 T 22-04-2016 VP0510 7754e912643c26a159f1ccb6df839684 262 Gene3D G3DSA:3.10.450.70 44 101 7.2E-22 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VP0510 7754e912643c26a159f1ccb6df839684 262 SUPERFAMILY SSF54423 44 100 4.19E-14 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VP0510 7754e912643c26a159f1ccb6df839684 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 99 1.1E-12 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VP0510 7754e912643c26a159f1ccb6df839684 262 SUPERFAMILY SSF52833 122 261 3.82E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0510 7754e912643c26a159f1ccb6df839684 262 PANTHER PTHR35272:SF3 3 261 3.9E-89 T 22-04-2016 VP0510 7754e912643c26a159f1ccb6df839684 262 Gene3D G3DSA:3.40.30.10 126 261 1.5E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0510 7754e912643c26a159f1ccb6df839684 262 Pfam PF13098 Thioredoxin-like domain 131 259 5.3E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 PANTHER PTHR10169:SF30 1 526 0.0 T 22-04-2016 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 22-04-2016 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 SUPERFAMILY SSF56719 33 485 1.07E-156 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 SMART SM00434 13 463 4.8E-234 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 SUPERFAMILY SSF101904 499 743 1.31E-50 T 22-04-2016 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 PANTHER PTHR10169 1 526 0.0 T 22-04-2016 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 Gene3D G3DSA:2.120.10.90 498 735 2.5E-26 T 22-04-2016 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 635 0.16 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.2E-137 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 Gene3D G3DSA:3.30.1360.40 240 333 8.2E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 Gene3D G3DSA:3.90.199.10 335 399 4.8E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 Gene3D G3DSA:3.90.199.10 32 239 4.8E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VP0431 2bb4f3969add9462425c73bfa2c5e1e7 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.953 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PANTHER PTHR30081:SF1 1 173 2.9E-231 T 22-04-2016 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 SUPERFAMILY SSF82866 413 609 2.49E-44 T 22-04-2016 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 3.0E-82 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PANTHER PTHR30081:SF1 227 285 2.9E-231 T 22-04-2016 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 Pfam PF07549 SecD/SecF GG Motif 116 141 2.1E-7 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 Gene3D G3DSA:1.20.1640.10 433 608 3.1E-24 T 22-04-2016 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PANTHER PTHR30081:SF1 316 616 2.9E-231 T 22-04-2016 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 4.3E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 4.3E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 4.3E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 Pfam PF02355 Protein export membrane protein 436 597 8.2E-18 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 1.8E-151 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 617 48.574 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PANTHER PTHR30081 316 616 2.9E-231 T 22-04-2016 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PANTHER PTHR30081 1 173 2.9E-231 T 22-04-2016 VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 6.3E-37 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain VP0590 d312630c28ef3d51be0ebd747ff6f1dd 618 PANTHER PTHR30081 227 285 2.9E-231 T 22-04-2016 VP2885 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.1E-44 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VP2885 2575495aef871798a88862dcd2069eba 98 PANTHER PTHR32071 19 98 4.2E-29 T 22-04-2016 VP2885 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 27 98 4.1E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2885 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.9E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2885 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VP2885 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VP2885 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VP2885 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VP2885 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2885 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2885 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2885 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 9.5E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 9.5E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 9.5E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 9.5E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PANTHER PTHR10992:SF768 5 255 5.2E-80 T 22-04-2016 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.6E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.6E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 1.6E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.6E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0837 5f3f024cf3e01589863110de7c3e343c 255 SUPERFAMILY SSF53474 5 253 6.49E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0837 5f3f024cf3e01589863110de7c3e343c 255 Gene3D G3DSA:3.40.50.1820 5 252 1.7E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0837 5f3f024cf3e01589863110de7c3e343c 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 3.2E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0837 5f3f024cf3e01589863110de7c3e343c 255 PANTHER PTHR10992 5 255 5.2E-80 T 22-04-2016 VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 SUPERFAMILY SSF48557 4 506 5.02E-192 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 PANTHER PTHR10362 4 494 2.1E-249 T 22-04-2016 VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 Pfam PF00221 Aromatic amino acid lyase 12 470 3.4E-188 T 22-04-2016 IPR001106 Aromatic amino acid lyase VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.089 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 PANTHER PTHR10362:SF7 4 494 2.1E-249 T 22-04-2016 VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 Gene3D G3DSA:1.20.200.10 198 495 1.1E-126 T 22-04-2016 VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 Gene3D G3DSA:1.10.275.10 4 197 3.8E-75 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VP1273 64fb5e37c2e342b1eb12ae67ac57c040 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 3.2E-214 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP0567 af8b89873f0a9aa2afdf5d92ae5d36ab 466 PANTHER PTHR30217 2 211 2.8E-235 T 22-04-2016 VP0567 af8b89873f0a9aa2afdf5d92ae5d36ab 466 PANTHER PTHR30217 258 466 2.8E-235 T 22-04-2016 VP0567 af8b89873f0a9aa2afdf5d92ae5d36ab 466 Pfam PF01136 Peptidase family U32 80 355 2.9E-96 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP0567 af8b89873f0a9aa2afdf5d92ae5d36ab 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP0567 af8b89873f0a9aa2afdf5d92ae5d36ab 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 3.0E-21 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP0567 af8b89873f0a9aa2afdf5d92ae5d36ab 466 PANTHER PTHR30217:SF6 2 211 2.8E-235 T 22-04-2016 VP0567 af8b89873f0a9aa2afdf5d92ae5d36ab 466 PANTHER PTHR30217:SF6 258 466 2.8E-235 T 22-04-2016 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 Gene3D G3DSA:3.90.1210.10 304 355 8.3E-18 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 Gene3D G3DSA:3.20.20.70 2 288 3.8E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 Pfam PF03102 NeuB family 22 289 1.8E-98 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 2 355 7.3E-150 T 22-04-2016 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 PANTHER PTHR23416:SF62 2 168 6.5E-96 T 22-04-2016 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 PANTHER PTHR23416:SF62 192 312 6.5E-96 T 22-04-2016 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 Pfam PF08666 SAF domain 304 355 1.5E-8 T 22-04-2016 IPR013974 SAF domain VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 PANTHER PTHR23416 2 168 6.5E-96 T 22-04-2016 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 PANTHER PTHR23416 192 312 6.5E-96 T 22-04-2016 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 SUPERFAMILY SSF51569 184 315 8.16E-79 T 22-04-2016 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 SUPERFAMILY SSF51569 2 157 8.16E-79 T 22-04-2016 VP0200 4db76dcf0d5296368f20e86d5d1f141e 357 SUPERFAMILY SSF51269 295 356 2.62E-18 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal VP0930 e7fbb215582eb625ffda28096444b0e2 264 Pfam PF12697 Alpha/beta hydrolase family 21 252 1.0E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0930 e7fbb215582eb625ffda28096444b0e2 264 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 14 260 33.144 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0930 e7fbb215582eb625ffda28096444b0e2 264 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 260 7.1E-84 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0930 e7fbb215582eb625ffda28096444b0e2 264 SUPERFAMILY SSF53474 16 261 2.39E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0930 e7fbb215582eb625ffda28096444b0e2 264 PANTHER PTHR10992 11 261 1.9E-40 T 22-04-2016 VP0930 e7fbb215582eb625ffda28096444b0e2 264 PANTHER PTHR10992:SF698 11 261 1.9E-40 T 22-04-2016 VP0930 e7fbb215582eb625ffda28096444b0e2 264 Gene3D G3DSA:3.40.50.1820 15 262 6.2E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1890 21db718fce91e9d25cdf32f02e2ac163 741 Pfam PF08206 Ribonuclease B OB domain 88 145 8.2E-14 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain VP1890 21db718fce91e9d25cdf32f02e2ac163 741 SMART SM00955 261 594 2.5E-171 T 22-04-2016 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 Pfam PF00773 RNB domain 261 593 3.4E-107 T 22-04-2016 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 ProSitePatterns PS01175 Ribonuclease II family signature. 561 585 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site VP1890 21db718fce91e9d25cdf32f02e2ac163 741 Gene3D G3DSA:2.40.50.140 644 738 9.3E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1890 21db718fce91e9d25cdf32f02e2ac163 741 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 739 1.7E-225 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 PANTHER PTHR23355 4 592 1.4E-201 T 22-04-2016 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 PANTHER PTHR23355 619 740 1.4E-201 T 22-04-2016 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 Hamap MF_01895 Ribonuclease R [rnr]. 39 741 49.733 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 PANTHER PTHR23355:SF9 4 592 1.4E-201 T 22-04-2016 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 PANTHER PTHR23355:SF9 619 740 1.4E-201 T 22-04-2016 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 SUPERFAMILY SSF50249 68 148 6.29E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1890 21db718fce91e9d25cdf32f02e2ac163 741 SUPERFAMILY SSF50249 665 736 4.82E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1890 21db718fce91e9d25cdf32f02e2ac163 741 SMART SM00316 660 741 5.4E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 SUPERFAMILY SSF50249 143 236 8.48E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1890 21db718fce91e9d25cdf32f02e2ac163 741 SUPERFAMILY SSF50249 222 658 3.13E-135 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1890 21db718fce91e9d25cdf32f02e2ac163 741 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 68 739 3.6E-196 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VP1890 21db718fce91e9d25cdf32f02e2ac163 741 Pfam PF00575 S1 RNA binding domain 658 739 3.4E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP0421 4c092b7ed54d966c985e72cf71367073 442 SUPERFAMILY SSF58104 133 442 2.22E-75 T 22-04-2016 VP0421 4c092b7ed54d966c985e72cf71367073 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 92 112 3.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP0421 4c092b7ed54d966c985e72cf71367073 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 307 336 3.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP0421 4c092b7ed54d966c985e72cf71367073 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 278 305 3.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP0421 4c092b7ed54d966c985e72cf71367073 442 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 227 440 3.8E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP0421 4c092b7ed54d966c985e72cf71367073 442 PANTHER PTHR32089 70 442 9.5E-118 T 22-04-2016 VP0421 4c092b7ed54d966c985e72cf71367073 442 Pfam PF00672 HAMP domain 95 161 2.6E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0421 4c092b7ed54d966c985e72cf71367073 442 PANTHER PTHR32089:SF64 70 442 9.5E-118 T 22-04-2016 VP0421 4c092b7ed54d966c985e72cf71367073 442 Gene3D G3DSA:1.10.287.950 198 410 3.0E-59 T 22-04-2016 VP0421 4c092b7ed54d966c985e72cf71367073 442 SMART SM00283 180 441 2.1E-69 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 SMART SM00729 84 293 8.5E-20 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 Pfam PF04055 Radical SAM superfamily 91 251 3.3E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 SUPERFAMILY SSF102114 52 315 3.14E-68 T 22-04-2016 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 6.3E-150 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 Gene3D G3DSA:3.20.20.70 53 313 3.5E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 PIRSF PIRSF005963 1 321 5.0E-129 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 PANTHER PTHR10949 4 321 1.3E-176 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 7.0E-8 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP0716 0fc4929d8e18fbde25344aee12e52f7b 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.75 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VP1751 655ea59c08fe93318c31d3f681b50f50 313 PANTHER PTHR20919:SF0 2 313 6.9E-157 T 22-04-2016 VP1751 655ea59c08fe93318c31d3f681b50f50 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.273 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VP1751 655ea59c08fe93318c31d3f681b50f50 313 Gene3D G3DSA:3.40.50.880 34 301 5.2E-121 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1751 655ea59c08fe93318c31d3f681b50f50 313 PIRSF PIRSF000450 1 309 7.7E-147 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VP1751 655ea59c08fe93318c31d3f681b50f50 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 3.7E-161 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VP1751 655ea59c08fe93318c31d3f681b50f50 313 SUPERFAMILY SSF52317 18 297 6.34E-102 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1751 655ea59c08fe93318c31d3f681b50f50 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-129 T 22-04-2016 VP1751 655ea59c08fe93318c31d3f681b50f50 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.6E-134 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VP1751 655ea59c08fe93318c31d3f681b50f50 313 PANTHER PTHR20919 2 313 6.9E-157 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VP0065 2cba734c2e9dc7c3375690907f95dd69 203 Pfam PF01081 KDPG and KHG aldolase 5 197 5.6E-73 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VP0065 2cba734c2e9dc7c3375690907f95dd69 203 Gene3D G3DSA:3.20.20.70 2 201 4.4E-75 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0065 2cba734c2e9dc7c3375690907f95dd69 203 PANTHER PTHR30246:SF5 1 202 1.6E-131 T 22-04-2016 VP0065 2cba734c2e9dc7c3375690907f95dd69 203 PANTHER PTHR30246 1 202 1.6E-131 T 22-04-2016 VP0065 2cba734c2e9dc7c3375690907f95dd69 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VP0065 2cba734c2e9dc7c3375690907f95dd69 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 VP0065 2cba734c2e9dc7c3375690907f95dd69 203 SUPERFAMILY SSF51569 3 201 1.52E-66 T 22-04-2016 VP0065 2cba734c2e9dc7c3375690907f95dd69 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 6.9E-83 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VP2793 29acd69719a5da366fe6e71805de4e20 210 PANTHER PTHR24567:SF27 1 207 3.8E-154 T 22-04-2016 VP2793 29acd69719a5da366fe6e71805de4e20 210 PANTHER PTHR24567 1 207 3.8E-154 T 22-04-2016 VP2793 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VP2793 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP2793 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP2793 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 6 143 8.8E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP2793 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VP2793 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2793 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.8E-23 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP2793 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.6E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP2793 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP2793 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VP2793 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP2793 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP2793 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1958 52769c3bb97f55333e7da589fd9d14c3 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 2.1E-107 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 Gene3D G3DSA:1.20.970.10 3 68 1.5E-27 T 22-04-2016 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 4.6E-130 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 PANTHER PTHR11922:SF5 17 32 1.2E-107 T 22-04-2016 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 PANTHER PTHR11922:SF5 67 328 1.2E-107 T 22-04-2016 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 6.3E-17 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VP1958 52769c3bb97f55333e7da589fd9d14c3 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 40.299 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 PANTHER PTHR11922 17 32 1.2E-107 T 22-04-2016 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 PANTHER PTHR11922 67 328 1.2E-107 T 22-04-2016 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 SUPERFAMILY SSF47648 2 67 2.62E-19 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VP1958 52769c3bb97f55333e7da589fd9d14c3 332 Gene3D G3DSA:3.40.1030.10 71 329 2.7E-104 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VP1958 52769c3bb97f55333e7da589fd9d14c3 332 SUPERFAMILY SSF52418 70 329 6.15E-96 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VP0632 ce59b6a61551780d69b04238fe8a66a7 476 PANTHER PTHR33451:SF5 17 463 1.5E-195 T 22-04-2016 VP0632 ce59b6a61551780d69b04238fe8a66a7 476 PANTHER PTHR33451 17 463 1.5E-195 T 22-04-2016 VP0632 ce59b6a61551780d69b04238fe8a66a7 476 Pfam PF03553 Na+/H+ antiporter family 37 234 1.6E-12 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 2.1E-187 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:3.40.50.300 124 297 3.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF00308 Bacterial dnaA protein 134 350 3.3E-98 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 SMART SM00382 165 378 4.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PANTHER PTHR30050 131 468 1.1E-246 T 22-04-2016 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PANTHER PTHR30050 1 104 1.1E-246 T 22-04-2016 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF11638 DnaA N-terminal domain 4 65 1.9E-19 T 22-04-2016 IPR024633 DnaA N-terminal domain VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:1.10.8.60 299 366 1.1E-30 T 22-04-2016 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PANTHER PTHR30050:SF2 131 468 1.1E-246 T 22-04-2016 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 PANTHER PTHR30050:SF2 1 104 1.1E-246 T 22-04-2016 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 SMART SM00760 376 445 3.4E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 SUPERFAMILY SSF52540 133 344 1.07E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:1.10.1750.10 367 467 8.0E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VP0011 ad5be436e8c39ea2deb69565d8b1fd60 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.548 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 329 357 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 Pfam PF01464 Transglycosylase SLT domain 318 421 9.9E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 Gene3D G3DSA:1.10.530.10 308 481 3.6E-37 T 22-04-2016 VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 PANTHER PTHR21666:SF215 293 496 4.1E-122 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 SUPERFAMILY SSF53850 48 287 5.34E-33 T 22-04-2016 VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 SUPERFAMILY SSF53955 265 417 1.29E-35 T 22-04-2016 IPR023346 Lysozyme-like domain VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 SUPERFAMILY SSF53955 452 470 1.29E-35 T 22-04-2016 IPR023346 Lysozyme-like domain VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 SMART SM00062 47 288 5.0E-25 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 12 488 48.65 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 287 6.8E-29 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 Gene3D G3DSA:3.40.190.10 23 150 5.1E-18 T 22-04-2016 VP0665 69fc8c79cc98e2b41dfab6da51014c94 529 PANTHER PTHR21666 293 496 4.1E-122 T 22-04-2016 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 SUPERFAMILY SSF46689 490 540 1.43E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 Gene3D G3DSA:3.30.450.40 5 207 6.0E-14 T 22-04-2016 IPR029016 GAF domain-like VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 PANTHER PTHR32071 146 541 1.6E-144 T 22-04-2016 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 Pfam PF00158 Sigma-54 interaction domain 213 377 3.9E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 SUPERFAMILY SSF52540 214 450 2.93E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 Gene3D G3DSA:3.40.50.300 210 383 2.8E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 SMART SM00382 231 378 4.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 Pfam PF13185 GAF domain 26 148 3.4E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 Gene3D G3DSA:1.10.10.60 474 539 1.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 SUPERFAMILY SSF55781 10 179 3.27E-14 T 22-04-2016 IPR029016 GAF domain-like VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 540 3.6E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 503 520 3.6E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 Gene3D G3DSA:1.10.8.60 384 459 3.0E-21 T 22-04-2016 VP1391 6a6ae5e130701459fb1f81cf56fc0713 543 Pfam PF02954 Bacterial regulatory protein, Fis family 499 537 7.5E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2254 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 SUPERFAMILY SSF101116 6 127 4.05E-39 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VP2254 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Gene3D G3DSA:1.20.120.340 6 126 8.8E-42 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VP2254 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Pfam PF02561 Flagellar protein FliS 6 122 2.5E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VP2254 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 6.2E-24 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VP2254 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 PIRSF PIRSF039090 1 133 1.3E-42 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VP2254 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 PANTHER PTHR34773 1 133 7.1E-42 T 22-04-2016 VP3003 2cfef83eccb31640e425b7124d3f754c 497 Gene3D G3DSA:3.30.420.150 130 304 7.3E-50 T 22-04-2016 VP3003 2cfef83eccb31640e425b7124d3f754c 497 SUPERFAMILY SSF53067 9 129 3.45E-36 T 22-04-2016 VP3003 2cfef83eccb31640e425b7124d3f754c 497 Gene3D G3DSA:3.30.420.40 6 129 1.6E-42 T 22-04-2016 VP3003 2cfef83eccb31640e425b7124d3f754c 497 SUPERFAMILY SSF109604 309 495 7.85E-40 T 22-04-2016 VP3003 2cfef83eccb31640e425b7124d3f754c 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 7.1E-88 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VP3003 2cfef83eccb31640e425b7124d3f754c 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 60.203 T 22-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VP3003 2cfef83eccb31640e425b7124d3f754c 497 PANTHER PTHR30005:SF2 1 492 9.4E-279 T 22-04-2016 VP3003 2cfef83eccb31640e425b7124d3f754c 497 PIRSF PIRSF001267 1 496 5.7E-177 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VP3003 2cfef83eccb31640e425b7124d3f754c 497 PANTHER PTHR30005 1 492 9.4E-279 T 22-04-2016 VP3003 2cfef83eccb31640e425b7124d3f754c 497 SUPERFAMILY SSF53067 134 305 5.77E-43 T 22-04-2016 VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 Gene3D G3DSA:3.30.70.270 415 546 1.3E-9 T 22-04-2016 VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 Pfam PF10442 FIST C domain 215 338 5.6E-11 T 22-04-2016 IPR019494 FIST, C-domain VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 SMART SM00052 590 828 2.3E-27 T 22-04-2016 IPR001633 EAL domain VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 Pfam PF08495 FIST N domain 30 212 1.8E-16 T 22-04-2016 IPR013702 FIST domain, N-terminal VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 Gene3D G3DSA:3.20.20.450 599 825 2.7E-54 T 22-04-2016 IPR001633 EAL domain VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 PANTHER PTHR33121:SF10 598 827 4.6E-42 T 22-04-2016 VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 SMART SM00897 27 214 2.9E-26 T 22-04-2016 IPR013702 FIST domain, N-terminal VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 PANTHER PTHR33121 598 827 4.6E-42 T 22-04-2016 VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 SUPERFAMILY SSF55073 419 526 3.45E-8 T 22-04-2016 IPR029787 Nucleotide cyclase VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 SMART SM01204 215 341 4.3E-17 T 22-04-2016 IPR019494 FIST, C-domain VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 Pfam PF00563 EAL domain 598 824 3.0E-56 T 22-04-2016 IPR001633 EAL domain VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 SUPERFAMILY SSF141868 598 825 4.97E-55 T 22-04-2016 IPR001633 EAL domain VP2979 974399ce8287d2d52c2bf8f2aa3a0106 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 1.5E-6 T 22-04-2016 IPR000160 GGDEF domain VP2686 c190ad270dfa4246fa94b7b167bb4e48 1292 Pfam PF13116 Protein of unknown function 506 792 2.0E-94 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 VP2686 c190ad270dfa4246fa94b7b167bb4e48 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 1.7E-58 T 22-04-2016 IPR032712 AsmA-like, C-terminal VP2686 c190ad270dfa4246fa94b7b167bb4e48 1292 PANTHER PTHR38690 1 1289 0.0 T 22-04-2016 VP2686 c190ad270dfa4246fa94b7b167bb4e48 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1280 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 VP2627 c86c2a85447d37730ca880edd2a23b32 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.1E-42 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VP2627 c86c2a85447d37730ca880edd2a23b32 90 PANTHER PTHR36965 2 90 7.8E-55 T 22-04-2016 VP2627 c86c2a85447d37730ca880edd2a23b32 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.452 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VP2627 c86c2a85447d37730ca880edd2a23b32 90 SUPERFAMILY SSF111148 1 89 8.89E-41 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VP2627 c86c2a85447d37730ca880edd2a23b32 90 Gene3D G3DSA:1.10.3880.10 1 90 1.5E-44 T 22-04-2016 VP2627 c86c2a85447d37730ca880edd2a23b32 90 PANTHER PTHR36965:SF1 2 90 7.8E-55 T 22-04-2016 VP2627 c86c2a85447d37730ca880edd2a23b32 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VP2627 c86c2a85447d37730ca880edd2a23b32 90 PIRSF PIRSF029827 1 90 1.0E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VP0926 5f5db84d04a44a237f9b570ea127b2f1 206 SMART SM00471 38 163 8.0E-8 T 22-04-2016 IPR003607 HD/PDEase domain VP0926 5f5db84d04a44a237f9b570ea127b2f1 206 Gene3D G3DSA:1.10.3210.10 13 205 2.7E-48 T 22-04-2016 IPR006674 HD domain VP0926 5f5db84d04a44a237f9b570ea127b2f1 206 SUPERFAMILY SSF109604 16 196 8.57E-44 T 22-04-2016 VP0926 5f5db84d04a44a237f9b570ea127b2f1 206 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 92 188 2.0E-40 T 22-04-2016 VP0926 5f5db84d04a44a237f9b570ea127b2f1 206 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 15 206 46.038 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VP0926 5f5db84d04a44a237f9b570ea127b2f1 206 Pfam PF13023 HD domain 23 170 3.6E-16 T 22-04-2016 IPR006674 HD domain VP0926 5f5db84d04a44a237f9b570ea127b2f1 206 PANTHER PTHR11845 16 202 5.1E-33 T 22-04-2016 VP1664 592ea009d3e37d180adf6ab11bd9144b 126 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 2 126 4.4E-52 T 22-04-2016 IPR012672 Type III secretion system YscX VP1664 592ea009d3e37d180adf6ab11bd9144b 126 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 2 126 3.0E-57 T 22-04-2016 IPR012672 Type III secretion system YscX VP0578 2d167a66e02ff636344f0c8ff3f3e050 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 2.4E-115 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 VP0578 2d167a66e02ff636344f0c8ff3f3e050 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 227 1.5E-112 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related VP0578 2d167a66e02ff636344f0c8ff3f3e050 258 Gene3D G3DSA:3.40.50.300 3 241 1.1E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0578 2d167a66e02ff636344f0c8ff3f3e050 258 PANTHER PTHR34383:SF1 3 258 1.9E-178 T 22-04-2016 VP0578 2d167a66e02ff636344f0c8ff3f3e050 258 PIRSF PIRSF028756 1 258 3.7E-132 T 22-04-2016 IPR016898 Polyphosphate kinase 2 VP0578 2d167a66e02ff636344f0c8ff3f3e050 258 SUPERFAMILY SSF52540 35 223 8.04E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0578 2d167a66e02ff636344f0c8ff3f3e050 258 PANTHER PTHR34383 3 258 1.9E-178 T 22-04-2016 VP2170 d3d7925cb235c99d6892ccb724b5f5f4 82 PANTHER PTHR33884 1 82 4.8E-22 T 22-04-2016 VP2170 d3d7925cb235c99d6892ccb724b5f5f4 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.8E-13 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 SUPERFAMILY SSF51735 1083 1281 4.53E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 SUPERFAMILY SSF51735 945 1047 4.53E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PANTHER PTHR11606:SF1 49 150 0.0 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PANTHER PTHR11606:SF1 673 1097 0.0 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PANTHER PTHR11606:SF1 215 562 0.0 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PANTHER PTHR11606:SF1 1122 1367 0.0 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 SUPERFAMILY SSF53223 754 940 1.53E-25 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 Gene3D G3DSA:3.40.50.720 1096 1180 2.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 Gene3D G3DSA:3.40.50.720 942 1053 2.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PANTHER PTHR11606 49 150 0.0 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PANTHER PTHR11606 673 1097 0.0 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PANTHER PTHR11606 215 562 0.0 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PANTHER PTHR11606 1122 1367 0.0 T 22-04-2016 VP1602 60859957a76eebaf9e2ec69c25f9eb6d 1613 PIRSF PIRSF036761 1 1610 0.0 T 22-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VP0701 6b6023506867dc8982ef2336d817601d 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 2.7E-128 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VP0701 6b6023506867dc8982ef2336d817601d 281 Gene3D G3DSA:3.30.1130.10 21 136 1.1E-45 T 22-04-2016 VP0701 6b6023506867dc8982ef2336d817601d 281 Gene3D G3DSA:3.30.1130.10 144 280 1.6E-56 T 22-04-2016 VP0701 6b6023506867dc8982ef2336d817601d 281 PANTHER PTHR34354 2 281 2.7E-103 T 22-04-2016 VP0701 6b6023506867dc8982ef2336d817601d 281 PIRSF PIRSF004750 6 281 7.3E-131 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VP0701 6b6023506867dc8982ef2336d817601d 281 SUPERFAMILY SSF55620 184 267 6.15E-10 T 22-04-2016 VP0701 6b6023506867dc8982ef2336d817601d 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.307 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VP0701 6b6023506867dc8982ef2336d817601d 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 9.8E-49 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VP0701 6b6023506867dc8982ef2336d817601d 281 Pfam PF14489 QueF-like protein 194 270 5.5E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VP0701 6b6023506867dc8982ef2336d817601d 281 PANTHER PTHR34354:SF1 2 281 2.7E-103 T 22-04-2016 VP2995 177b4978630b88ac22617d1b562fe283 237 Pfam PF00970 Oxidoreductase FAD-binding domain 22 99 4.4E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VP2995 177b4978630b88ac22617d1b562fe283 237 Gene3D G3DSA:3.40.50.80 104 235 8.0E-38 T 22-04-2016 VP2995 177b4978630b88ac22617d1b562fe283 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 9.6E-24 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VP2995 177b4978630b88ac22617d1b562fe283 237 SUPERFAMILY SSF63380 2 101 4.74E-17 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP2995 177b4978630b88ac22617d1b562fe283 237 SUPERFAMILY SSF52343 104 235 2.62E-35 T 22-04-2016 VP2995 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2995 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2995 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2995 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2995 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2995 177b4978630b88ac22617d1b562fe283 237 Gene3D G3DSA:2.40.30.10 1 101 1.1E-26 T 22-04-2016 VP2995 177b4978630b88ac22617d1b562fe283 237 PANTHER PTHR19370 3 237 7.5E-119 T 22-04-2016 VP2995 177b4978630b88ac22617d1b562fe283 237 PANTHER PTHR19370:SF119 3 237 7.5E-119 T 22-04-2016 VP1259 f41fa3a09950ca524bed473f331982bb 784 SUPERFAMILY SSF52540 18 326 9.96E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1259 f41fa3a09950ca524bed473f331982bb 784 SMART SM00847 372 460 9.0E-4 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VP1259 f41fa3a09950ca524bed473f331982bb 784 SMART SM00487 2 176 3.7E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP1259 f41fa3a09950ca524bed473f331982bb 784 Gene3D G3DSA:3.40.50.300 3 150 1.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1259 f41fa3a09950ca524bed473f331982bb 784 SMART SM00490 219 315 1.0E-14 T 22-04-2016 IPR001650 Helicase, C-terminal VP1259 f41fa3a09950ca524bed473f331982bb 784 Gene3D G3DSA:3.40.50.300 190 326 5.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1259 f41fa3a09950ca524bed473f331982bb 784 PANTHER PTHR18934 3 436 1.8E-91 T 22-04-2016 VP1259 f41fa3a09950ca524bed473f331982bb 784 Pfam PF04408 Helicase associated domain (HA2) 373 432 1.3E-7 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VP1259 f41fa3a09950ca524bed473f331982bb 784 Pfam PF00270 DEAD/DEAH box helicase 16 151 1.6E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP1259 f41fa3a09950ca524bed473f331982bb 784 Pfam PF00271 Helicase conserved C-terminal domain 196 314 3.1E-14 T 22-04-2016 IPR001650 Helicase, C-terminal VP1259 f41fa3a09950ca524bed473f331982bb 784 PANTHER PTHR18934:SF136 3 436 1.8E-91 T 22-04-2016 VP0205 3a29e504ef2aca921bdd35d1887e3420 439 SUPERFAMILY SSF53383 25 411 3.06E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0205 3a29e504ef2aca921bdd35d1887e3420 439 Gene3D G3DSA:3.90.1150.10 317 416 3.2E-13 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP0205 3a29e504ef2aca921bdd35d1887e3420 439 Gene3D G3DSA:3.90.1150.10 10 67 3.2E-13 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP0205 3a29e504ef2aca921bdd35d1887e3420 439 PANTHER PTHR11986 6 418 3.2E-80 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP0205 3a29e504ef2aca921bdd35d1887e3420 439 Gene3D G3DSA:3.40.640.10 69 314 9.7E-44 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0205 3a29e504ef2aca921bdd35d1887e3420 439 PANTHER PTHR11986:SF83 6 418 3.2E-80 T 22-04-2016 VP0205 3a29e504ef2aca921bdd35d1887e3420 439 Pfam PF00202 Aminotransferase class-III 32 339 6.0E-37 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 Gene3D G3DSA:1.10.10.10 18 103 8.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 2.4E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 Gene3D G3DSA:3.40.190.10 106 192 2.9E-11 T 22-04-2016 VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 Gene3D G3DSA:3.40.190.10 293 321 2.9E-11 T 22-04-2016 VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 PANTHER PTHR30118:SF12 14 315 4.8E-135 T 22-04-2016 VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 SUPERFAMILY SSF46785 20 102 1.77E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 Pfam PF03466 LysR substrate binding domain 112 318 7.9E-15 T 22-04-2016 IPR005119 LysR, substrate-binding VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 Gene3D G3DSA:3.40.190.10 193 287 9.3E-20 T 22-04-2016 VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 PANTHER PTHR30118 14 315 4.8E-135 T 22-04-2016 VP1382 ae05d60cfa509fdfd6d2d3157fe5890b 326 SUPERFAMILY SSF53850 106 316 1.28E-29 T 22-04-2016 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 PANTHER PTHR11817 1 464 4.5E-255 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF52935 323 469 2.88E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.6E-155 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF50800 70 167 2.97E-29 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:2.40.33.10 73 168 1.9E-32 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 4.8E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.40.1380.20 327 468 1.1E-43 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.20.20.60 2 72 1.3E-118 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.20.20.60 169 326 1.3E-118 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.5E-188 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF51621 1 74 4.19E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF51621 156 339 4.19E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP0356 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2714 a57e22fb93fbb321de578b0c71b300c8 373 PIRSF PIRSF000524 5 373 7.9E-111 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VP2714 a57e22fb93fbb321de578b0c71b300c8 373 SUPERFAMILY SSF53383 9 371 3.74E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP2714 a57e22fb93fbb321de578b0c71b300c8 373 Gene3D G3DSA:3.40.640.10 23 267 7.2E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP2714 a57e22fb93fbb321de578b0c71b300c8 373 Gene3D G3DSA:3.90.1150.10 268 372 2.0E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2714 a57e22fb93fbb321de578b0c71b300c8 373 PANTHER PTHR21152 3 371 5.3E-129 T 22-04-2016 VP2714 a57e22fb93fbb321de578b0c71b300c8 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VP2714 a57e22fb93fbb321de578b0c71b300c8 373 Pfam PF00266 Aminotransferase class-V 13 351 1.0E-38 T 22-04-2016 IPR000192 Aminotransferase class V domain VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 PANTHER PTHR11390 3 188 1.5E-90 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 SUPERFAMILY SSF57783 66 110 3.0E-15 T 22-04-2016 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 186 0.98 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 1.9E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 2.3E-16 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 1.6E-17 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 PANTHER PTHR11390:SF26 3 188 1.5E-90 T 22-04-2016 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 Gene3D G3DSA:3.30.65.10 17 59 1.3E-14 T 22-04-2016 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 Gene3D G3DSA:3.30.65.10 105 146 1.8E-7 T 22-04-2016 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 Gene3D G3DSA:3.30.65.10 66 104 4.1E-15 T 22-04-2016 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 SUPERFAMILY SSF57783 110 147 8.33E-5 T 22-04-2016 VP3038 9b1cfd6b38052c95703ba3a50fedf163 189 SUPERFAMILY SSF57783 16 64 2.98E-14 T 22-04-2016 VP1165 4f51683fa835d7f31c286c0899de3362 301 SMART SM01131 178 300 2.2E-33 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VP1165 4f51683fa835d7f31c286c0899de3362 301 SUPERFAMILY SSF64182 1 298 4.97E-67 T 22-04-2016 VP1165 4f51683fa835d7f31c286c0899de3362 301 Gene3D G3DSA:3.90.1640.10 2 180 1.6E-55 T 22-04-2016 VP1165 4f51683fa835d7f31c286c0899de3362 301 Pfam PF02833 DHHA2 domain 180 297 5.8E-17 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VP1165 4f51683fa835d7f31c286c0899de3362 301 Pfam PF01368 DHH family 2 142 1.9E-21 T 22-04-2016 IPR001667 DDH domain VP1165 4f51683fa835d7f31c286c0899de3362 301 PANTHER PTHR12112 1 301 3.7E-99 T 22-04-2016 VP1165 4f51683fa835d7f31c286c0899de3362 301 PANTHER PTHR12112:SF17 1 301 3.7E-99 T 22-04-2016 VP2157 159f7a7c412671e303d7ae823fd6252f 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.6E-138 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VP2157 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 SUPERFAMILY SSF55347 149 312 3.43E-78 T 22-04-2016 VP2157 159f7a7c412671e303d7ae823fd6252f 331 SMART SM00846 3 150 2.3E-97 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 PIRSF PIRSF000149 1 331 4.9E-135 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.2E-70 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 Gene3D G3DSA:3.40.50.720 1 158 3.2E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2157 159f7a7c412671e303d7ae823fd6252f 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 3.4E-61 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 SUPERFAMILY SSF51735 3 166 2.5E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2157 159f7a7c412671e303d7ae823fd6252f 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VP2157 159f7a7c412671e303d7ae823fd6252f 331 Gene3D G3DSA:3.30.360.10 159 314 3.3E-85 T 22-04-2016 VP2157 159f7a7c412671e303d7ae823fd6252f 331 PANTHER PTHR10836 1 331 6.3E-241 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF11987 Translation-initiation factor 2 689 794 1.1E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF50447 806 902 1.59E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:2.40.30.10 577 668 5.6E-22 T 22-04-2016 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF52156 682 811 8.24E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF50447 578 659 1.93E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:2.40.30.10 806 902 9.1E-40 T 22-04-2016 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF46955 3 50 3.11E-12 T 22-04-2016 IPR009061 Putative DNA-binding domain VP2456 d081880ea17bbe0295850cc9f806e1b0 905 ProSitePatterns PS01176 Initiation factor 2 signature. 855 877 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 902 17.648 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF52540 403 569 6.19E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF00009 Elongation factor Tu GTP binding domain 408 564 2.8E-32 T 22-04-2016 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 408 562 7.7E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 PANTHER PTHR23115 757 905 4.0E-212 T 22-04-2016 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 PANTHER PTHR23115 382 732 4.0E-212 T 22-04-2016 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 PANTHER PTHR23115:SF184 757 905 4.0E-212 T 22-04-2016 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 PANTHER PTHR23115:SF184 382 732 4.0E-212 T 22-04-2016 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.30.56.50 2 50 6.1E-22 T 22-04-2016 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.40.50.300 401 563 9.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 330 379 6.4E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 3.8E-8 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 5.2E-16 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial VP2456 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.40.50.10050 704 783 3.3E-26 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VP2456 d081880ea17bbe0295850cc9f806e1b0 905 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 322 904 1.8E-285 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VP1990 96f9f9f34fd92afe34cfe71d7507eae2 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 140 3.3E-47 T 22-04-2016 IPR022604 Protein of unknown function DUF2955 VP1990 96f9f9f34fd92afe34cfe71d7507eae2 339 PIRSF PIRSF029594 1 331 1.9E-95 T 22-04-2016 IPR016926 Uncharacterised conserved protein UCP029594 VP1990 96f9f9f34fd92afe34cfe71d7507eae2 339 Pfam PF13515 Fusaric acid resistance protein-like 182 313 5.1E-7 T 22-04-2016 VP2174 c3ab5ade836e9f1943b601f975f80ad1 126 PANTHER PTHR11803 1 125 1.5E-68 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VP2174 c3ab5ade836e9f1943b601f975f80ad1 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 5.6E-47 T 22-04-2016 IPR006056 RidA family VP2174 c3ab5ade836e9f1943b601f975f80ad1 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 3.6E-38 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VP2174 c3ab5ade836e9f1943b601f975f80ad1 126 PANTHER PTHR11803:SF15 1 125 1.5E-68 T 22-04-2016 VP2174 c3ab5ade836e9f1943b601f975f80ad1 126 Gene3D G3DSA:3.30.1330.40 2 124 1.6E-46 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VP2174 c3ab5ade836e9f1943b601f975f80ad1 126 SUPERFAMILY SSF55298 1 125 3.93E-42 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VP2367 becfaddc8ae4905a58c252e369014453 142 PANTHER PTHR12735 7 142 3.8E-51 T 22-04-2016 VP2367 becfaddc8ae4905a58c252e369014453 142 SUPERFAMILY SSF82649 4 141 3.82E-50 T 22-04-2016 VP2367 becfaddc8ae4905a58c252e369014453 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 3.3E-47 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 VP2367 becfaddc8ae4905a58c252e369014453 142 Gene3D G3DSA:3.90.1010.10 5 141 4.0E-55 T 22-04-2016 VP2367 becfaddc8ae4905a58c252e369014453 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 8.8E-48 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VP2367 becfaddc8ae4905a58c252e369014453 142 PANTHER PTHR12735:SF11 7 142 3.8E-51 T 22-04-2016 VP1212 5267d1a01468442e05cbd5839b4699f1 219 Gene3D G3DSA:1.10.10.10 122 219 2.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1212 5267d1a01468442e05cbd5839b4699f1 219 SUPERFAMILY SSF46894 119 217 7.65E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP1212 5267d1a01468442e05cbd5839b4699f1 219 PANTHER PTHR26402:SF316 1 219 1.8E-97 T 22-04-2016 VP1212 5267d1a01468442e05cbd5839b4699f1 219 SUPERFAMILY SSF52172 1 133 2.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily VP1212 5267d1a01468442e05cbd5839b4699f1 219 Gene3D G3DSA:3.40.50.2300 1 120 5.2E-34 T 22-04-2016 VP1212 5267d1a01468442e05cbd5839b4699f1 219 SMART SM00448 1 112 1.7E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1212 5267d1a01468442e05cbd5839b4699f1 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.6E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP1212 5267d1a01468442e05cbd5839b4699f1 219 PANTHER PTHR26402 1 219 1.8E-97 T 22-04-2016 VP1212 5267d1a01468442e05cbd5839b4699f1 219 Pfam PF00072 Response regulator receiver domain 3 112 6.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1212 5267d1a01468442e05cbd5839b4699f1 219 SMART SM00862 145 216 4.2E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 10 67 1.8E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 Pfam PF01467 Cytidylyltransferase-like 11 139 3.3E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 PANTHER PTHR21342 2 167 4.2E-75 T 22-04-2016 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 Gene3D G3DSA:3.40.50.620 8 163 5.1E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 10 162 6.9E-59 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 SUPERFAMILY SSF52374 8 162 1.9E-44 T 22-04-2016 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 17 100 0.001 T 22-04-2016 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 26 47 1.0E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 91 107 1.0E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 118 140 1.0E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 8 26 1.0E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 55 79 1.0E-47 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 PANTHER PTHR21342:SF1 2 167 4.2E-75 T 22-04-2016 VP0190 56977ae2a24eb973cbcfd6c99677ece4 167 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 8 164 34.649 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VP0624 8f6e387cab51380e6e002e6de5915907 307 PANTHER PTHR30537:SF8 1 304 2.2E-85 T 22-04-2016 VP0624 8f6e387cab51380e6e002e6de5915907 307 Gene3D G3DSA:1.10.10.10 10 85 1.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0624 8f6e387cab51380e6e002e6de5915907 307 PANTHER PTHR30537 1 304 2.2E-85 T 22-04-2016 VP0624 8f6e387cab51380e6e002e6de5915907 307 SUPERFAMILY SSF53850 94 304 1.74E-23 T 22-04-2016 VP0624 8f6e387cab51380e6e002e6de5915907 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0624 8f6e387cab51380e6e002e6de5915907 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0624 8f6e387cab51380e6e002e6de5915907 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0624 8f6e387cab51380e6e002e6de5915907 307 SUPERFAMILY SSF46785 10 112 1.21E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0624 8f6e387cab51380e6e002e6de5915907 307 Gene3D G3DSA:3.40.190.10 94 202 4.5E-23 T 22-04-2016 VP0624 8f6e387cab51380e6e002e6de5915907 307 Pfam PF03466 LysR substrate binding domain 94 300 1.5E-21 T 22-04-2016 IPR005119 LysR, substrate-binding VP0624 8f6e387cab51380e6e002e6de5915907 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 4.0E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2421 c1e9c48c2f0f9db262491d1215cffdc7 438 SUPERFAMILY SSF52540 245 425 8.07E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2421 c1e9c48c2f0f9db262491d1215cffdc7 438 SUPERFAMILY SSF52540 148 194 8.07E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2421 c1e9c48c2f0f9db262491d1215cffdc7 438 SMART SM00382 167 358 0.0039 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2421 c1e9c48c2f0f9db262491d1215cffdc7 438 Gene3D G3DSA:3.40.50.300 145 201 5.1E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2421 c1e9c48c2f0f9db262491d1215cffdc7 438 Gene3D G3DSA:3.40.50.300 255 372 5.1E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0234 bac4847b5295b3f02e82d4faa918cac6 391 Gene3D G3DSA:3.40.640.10 9 255 2.4E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0234 bac4847b5295b3f02e82d4faa918cac6 391 SUPERFAMILY SSF53383 8 386 1.09E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0234 bac4847b5295b3f02e82d4faa918cac6 391 Gene3D G3DSA:3.90.1150.10 256 382 1.4E-12 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP0234 bac4847b5295b3f02e82d4faa918cac6 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 381 1.0E-93 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VP0234 bac4847b5295b3f02e82d4faa918cac6 391 PANTHER PTHR30244 10 389 1.5E-84 T 22-04-2016 VP0234 bac4847b5295b3f02e82d4faa918cac6 391 PIRSF PIRSF000390 1 389 1.1E-115 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VP0234 bac4847b5295b3f02e82d4faa918cac6 391 PANTHER PTHR30244:SF16 10 389 1.5E-84 T 22-04-2016 VP1373 2807700f9d3ef421f4225b7392c92e8d 158 SUPERFAMILY SSF55729 1 155 3.43E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1373 2807700f9d3ef421f4225b7392c92e8d 158 Gene3D G3DSA:3.40.630.30 1 156 4.6E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1373 2807700f9d3ef421f4225b7392c92e8d 158 Pfam PF13673 Acetyltransferase (GNAT) domain 30 151 3.5E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP1373 2807700f9d3ef421f4225b7392c92e8d 158 PANTHER PTHR23091 1 158 1.2E-20 T 22-04-2016 VP1379 b08d6ca127d500dbacb63480fa76df05 219 PANTHER PTHR30086:SF4 12 218 3.3E-58 T 22-04-2016 VP1379 b08d6ca127d500dbacb63480fa76df05 219 Pfam PF01810 LysE type translocator 26 214 2.2E-35 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP1379 b08d6ca127d500dbacb63480fa76df05 219 PIRSF PIRSF006324 11 218 5.0E-61 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP1379 b08d6ca127d500dbacb63480fa76df05 219 PANTHER PTHR30086 12 218 3.3E-58 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP0394 55f1f96f0a830071bd3726a4679c596c 221 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 156 178 7.3E-22 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VP0394 55f1f96f0a830071bd3726a4679c596c 221 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 21 33 7.3E-22 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VP0394 55f1f96f0a830071bd3726a4679c596c 221 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 179 193 7.3E-22 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VP0394 55f1f96f0a830071bd3726a4679c596c 221 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 67 86 7.3E-22 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 VP0394 55f1f96f0a830071bd3726a4679c596c 221 SUPERFAMILY SSF53335 4 217 1.12E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0394 55f1f96f0a830071bd3726a4679c596c 221 Pfam PF01555 DNA methylase 154 212 2.1E-16 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VP0394 55f1f96f0a830071bd3726a4679c596c 221 Pfam PF01555 DNA methylase 21 140 2.2E-16 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VP0394 55f1f96f0a830071bd3726a4679c596c 221 Gene3D G3DSA:3.40.50.150 4 217 2.4E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0394 55f1f96f0a830071bd3726a4679c596c 221 PANTHER PTHR13370 8 217 2.3E-28 T 22-04-2016 VP0394 55f1f96f0a830071bd3726a4679c596c 221 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP0394 55f1f96f0a830071bd3726a4679c596c 221 PANTHER PTHR13370:SF7 8 217 2.3E-28 T 22-04-2016 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 Gene3D G3DSA:3.40.1060.10 166 280 1.7E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PANTHER PTHR11670 327 471 2.6E-269 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PANTHER PTHR11670 1 307 2.6E-269 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 Gene3D G3DSA:3.30.499.10 2 158 2.5E-23 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 5.4E-156 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PANTHER PTHR11670:SF38 327 471 2.6E-269 T 22-04-2016 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PANTHER PTHR11670:SF38 1 307 2.6E-269 T 22-04-2016 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 SUPERFAMILY SSF53732 1 466 2.49E-165 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.808 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 343 354 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 82 95 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 133 148 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 195 208 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 119 132 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 108 116 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 286 300 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 209 222 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 PRINTS PR00415 Aconitase family signature 399 412 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 2.3E-266 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0343 edf9e5b2204212ff7286064a5a9825e2 471 Gene3D G3DSA:3.30.499.10 317 468 4.0E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1486 f9637767418a9699613a5e75397e5689 531 SMART SM00283 264 526 8.0E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1486 f9637767418a9699613a5e75397e5689 531 Gene3D G3DSA:1.10.287.950 280 495 3.8E-49 T 22-04-2016 VP1486 f9637767418a9699613a5e75397e5689 531 PANTHER PTHR32089:SF44 143 529 3.8E-120 T 22-04-2016 VP1486 f9637767418a9699613a5e75397e5689 531 PANTHER PTHR32089 143 529 3.8E-120 T 22-04-2016 VP1486 f9637767418a9699613a5e75397e5689 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.8E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP1486 f9637767418a9699613a5e75397e5689 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.8E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP1486 f9637767418a9699613a5e75397e5689 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 173 193 1.8E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP1486 f9637767418a9699613a5e75397e5689 531 SUPERFAMILY SSF58104 218 527 3.14E-61 T 22-04-2016 VP1486 f9637767418a9699613a5e75397e5689 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 523 7.3E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP0955 6e653d5b8449cac98c986c2c8470eee8 107 PANTHER PTHR11938 1 80 2.8E-46 T 22-04-2016 VP0955 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VP0955 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VP0955 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VP0955 6e653d5b8449cac98c986c2c8470eee8 107 SUPERFAMILY SSF54862 3 96 1.24E-22 T 22-04-2016 VP0955 6e653d5b8449cac98c986c2c8470eee8 107 PANTHER PTHR11938:SF101 1 80 2.8E-46 T 22-04-2016 VP0955 6e653d5b8449cac98c986c2c8470eee8 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.0E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP0955 6e653d5b8449cac98c986c2c8470eee8 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 1.0E-16 T 22-04-2016 IPR022569 Ferredoxin, C-terminal VP0955 6e653d5b8449cac98c986c2c8470eee8 107 Gene3D G3DSA:3.30.70.20 3 103 1.9E-20 T 22-04-2016 VP0599 19367ca5e27f4ca11876fd434d40eefe 171 PANTHER PTHR14021 1 163 2.0E-54 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VP0599 19367ca5e27f4ca11876fd434d40eefe 171 Gene3D G3DSA:1.10.287.110 1 72 7.9E-26 T 22-04-2016 IPR001623 DnaJ domain VP0599 19367ca5e27f4ca11876fd434d40eefe 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 3.9E-41 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VP0599 19367ca5e27f4ca11876fd434d40eefe 171 SUPERFAMILY SSF47144 78 170 5.89E-25 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VP0599 19367ca5e27f4ca11876fd434d40eefe 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.093 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VP0599 19367ca5e27f4ca11876fd434d40eefe 171 SMART SM00271 1 66 4.2E-8 T 22-04-2016 IPR001623 DnaJ domain VP0599 19367ca5e27f4ca11876fd434d40eefe 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 2.4E-19 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VP0599 19367ca5e27f4ca11876fd434d40eefe 171 PANTHER PTHR14021:SF15 1 163 2.0E-54 T 22-04-2016 VP0599 19367ca5e27f4ca11876fd434d40eefe 171 Gene3D G3DSA:1.20.1280.20 81 170 2.1E-31 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VP0599 19367ca5e27f4ca11876fd434d40eefe 171 SUPERFAMILY SSF46565 1 72 1.83E-16 T 22-04-2016 IPR001623 DnaJ domain VP0599 19367ca5e27f4ca11876fd434d40eefe 171 Pfam PF00226 DnaJ domain 2 70 1.1E-6 T 22-04-2016 IPR001623 DnaJ domain VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 Gene3D G3DSA:3.40.50.720 111 289 2.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 Gene3D G3DSA:3.40.50.720 4 110 1.1E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 SUPERFAMILY SSF51735 103 290 3.52E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 37 315 2.1E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 PANTHER PTHR10996 34 316 1.2E-102 T 22-04-2016 VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 9.2E-56 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VP2678 fa80a8ff4a28f02007bc7fd374f4d942 320 SUPERFAMILY SSF52283 4 139 3.97E-33 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.4E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0470 c93dadaefd81d114945f85e754afcb2a 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.871 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0470 c93dadaefd81d114945f85e754afcb2a 379 Gene3D G3DSA:3.50.30.20 5 144 2.7E-63 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PANTHER PTHR11405 3 173 1.6E-252 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PANTHER PTHR11405 189 377 1.6E-252 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 1.8E-150 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0470 c93dadaefd81d114945f85e754afcb2a 379 SMART SM01097 3 133 3.8E-93 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0470 c93dadaefd81d114945f85e754afcb2a 379 Gene3D G3DSA:3.40.50.880 154 377 1.1E-82 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP0470 c93dadaefd81d114945f85e754afcb2a 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.4E-47 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 SUPERFAMILY SSF52317 153 377 2.14E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 22-04-2016 VP0470 c93dadaefd81d114945f85e754afcb2a 379 SUPERFAMILY SSF52021 5 142 7.06E-58 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0320 abb0f41236a7881062ec1806fa9158e7 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 728 3.1E-213 T 22-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein VP0320 abb0f41236a7881062ec1806fa9158e7 859 PANTHER PTHR33362 1 351 1.5E-297 T 22-04-2016 VP0320 abb0f41236a7881062ec1806fa9158e7 859 PANTHER PTHR33362 427 752 1.5E-297 T 22-04-2016 VP0320 abb0f41236a7881062ec1806fa9158e7 859 PANTHER PTHR33362:SF1 1 351 1.5E-297 T 22-04-2016 VP0320 abb0f41236a7881062ec1806fa9158e7 859 PANTHER PTHR33362:SF1 427 752 1.5E-297 T 22-04-2016 VP0320 abb0f41236a7881062ec1806fa9158e7 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 2.6E-70 T 22-04-2016 IPR021814 Protein of unknown function DUF3394 VP0320 abb0f41236a7881062ec1806fa9158e7 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 667 2.4E-75 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VP2936 076a507dff3480b5a57e837ea9d75613 270 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.257 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2936 076a507dff3480b5a57e837ea9d75613 270 SUPERFAMILY SSF53681 8 108 3.6E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2936 076a507dff3480b5a57e837ea9d75613 270 PANTHER PTHR21198:SF2 1 265 2.0E-92 T 22-04-2016 VP2936 076a507dff3480b5a57e837ea9d75613 270 Gene3D G3DSA:3.40.50.1860 6 174 8.1E-45 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2936 076a507dff3480b5a57e837ea9d75613 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 3.0E-25 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2936 076a507dff3480b5a57e837ea9d75613 270 PANTHER PTHR21198 1 265 2.0E-92 T 22-04-2016 VP2936 076a507dff3480b5a57e837ea9d75613 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 231 9.9E-69 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2936 076a507dff3480b5a57e837ea9d75613 270 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2936 076a507dff3480b5a57e837ea9d75613 270 SUPERFAMILY SSF53681 112 261 1.55E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP1865 1919c14f432a64bcca76479bc2290362 320 Pfam PF00589 Phage integrase family 105 305 5.1E-44 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP1865 1919c14f432a64bcca76479bc2290362 320 PANTHER PTHR30349:SF28 9 180 6.8E-118 T 22-04-2016 VP1865 1919c14f432a64bcca76479bc2290362 320 PANTHER PTHR30349:SF28 199 308 6.8E-118 T 22-04-2016 VP1865 1919c14f432a64bcca76479bc2290362 320 Gene3D G3DSA:1.10.150.130 15 84 1.3E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VP1865 1919c14f432a64bcca76479bc2290362 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 4.6E-156 T 22-04-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VP1865 1919c14f432a64bcca76479bc2290362 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 2.4E-23 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VP1865 1919c14f432a64bcca76479bc2290362 320 SUPERFAMILY SSF56349 99 185 6.77E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP1865 1919c14f432a64bcca76479bc2290362 320 SUPERFAMILY SSF56349 214 315 6.77E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP1865 1919c14f432a64bcca76479bc2290362 320 PANTHER PTHR30349 9 180 6.8E-118 T 22-04-2016 VP1865 1919c14f432a64bcca76479bc2290362 320 PANTHER PTHR30349 199 308 6.8E-118 T 22-04-2016 VP1865 1919c14f432a64bcca76479bc2290362 320 Gene3D G3DSA:1.10.443.10 105 307 2.5E-48 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0448 f5211deaf3842acb0073fba9bce57569 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 117 24.326 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VP0448 f5211deaf3842acb0073fba9bce57569 121 SUPERFAMILY SSF52980 7 111 1.61E-22 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VP0448 f5211deaf3842acb0073fba9bce57569 121 Gene3D G3DSA:3.40.1350.10 13 118 1.2E-36 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VP0448 f5211deaf3842acb0073fba9bce57569 121 PANTHER PTHR34039 2 121 2.2E-36 T 22-04-2016 VP0448 f5211deaf3842acb0073fba9bce57569 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 119 1.2E-35 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VP0448 f5211deaf3842acb0073fba9bce57569 121 PANTHER PTHR34039:SF1 2 121 2.2E-36 T 22-04-2016 VP0448 f5211deaf3842acb0073fba9bce57569 121 Pfam PF02021 Uncharacterised protein family UPF0102 13 104 7.6E-29 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VP2119 474b3faa762e2c246c7f9fd144048fa9 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 2.4E-61 T 22-04-2016 IPR021879 Ribosomal S4P (gammaproteobacterial) VP2797 f029495f09a92b89d40325a8965a38e9 403 Gene3D G3DSA:3.90.1150.10 306 400 4.4E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2797 f029495f09a92b89d40325a8965a38e9 403 Gene3D G3DSA:3.90.1150.10 14 59 4.4E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2797 f029495f09a92b89d40325a8965a38e9 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.815 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VP2797 f029495f09a92b89d40325a8965a38e9 403 PANTHER PTHR11986:SF71 12 403 1.5E-195 T 22-04-2016 VP2797 f029495f09a92b89d40325a8965a38e9 403 PANTHER PTHR11986 12 403 1.5E-195 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP2797 f029495f09a92b89d40325a8965a38e9 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP2797 f029495f09a92b89d40325a8965a38e9 403 Gene3D G3DSA:3.40.640.10 60 302 2.5E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP2797 f029495f09a92b89d40325a8965a38e9 403 SUPERFAMILY SSF53383 16 399 8.2E-130 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP2797 f029495f09a92b89d40325a8965a38e9 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 8.2E-207 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VP2797 f029495f09a92b89d40325a8965a38e9 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 6.6E-148 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VP2797 f029495f09a92b89d40325a8965a38e9 403 Pfam PF00202 Aminotransferase class-III 22 399 8.0E-126 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP0559 6e3345ae66870923d83a04c62186ec8f 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP0559 6e3345ae66870923d83a04c62186ec8f 325 SMART SM00363 18 83 2.8E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0559 6e3345ae66870923d83a04c62186ec8f 325 SUPERFAMILY SSF55120 77 317 6.58E-80 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP0559 6e3345ae66870923d83a04c62186ec8f 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 5.4E-105 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP0559 6e3345ae66870923d83a04c62186ec8f 325 PANTHER PTHR11079 7 323 1.9E-153 T 22-04-2016 VP0559 6e3345ae66870923d83a04c62186ec8f 325 Pfam PF01479 S4 domain 18 65 1.3E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0559 6e3345ae66870923d83a04c62186ec8f 325 PANTHER PTHR11079:SF73 7 323 1.9E-153 T 22-04-2016 VP0559 6e3345ae66870923d83a04c62186ec8f 325 Gene3D G3DSA:3.10.290.10 18 68 9.4E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0559 6e3345ae66870923d83a04c62186ec8f 325 SUPERFAMILY SSF55174 17 68 1.85E-11 T 22-04-2016 VP0559 6e3345ae66870923d83a04c62186ec8f 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.1E-29 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 SUPERFAMILY SSF81665 250 306 4.97E-12 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 SUPERFAMILY SSF81665 726 766 4.97E-12 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 SUPERFAMILY SSF81665 404 495 4.97E-12 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 Pfam PF00403 Heavy-metal-associated domain 93 154 4.1E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 SUPERFAMILY SSF56784 500 519 3.37E-47 T 22-04-2016 IPR023214 HAD-like domain VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 SUPERFAMILY SSF56784 554 781 3.37E-47 T 22-04-2016 IPR023214 HAD-like domain VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PANTHER PTHR24093 74 783 3.7E-189 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 Gene3D G3DSA:3.40.50.1000 475 517 6.7E-45 T 22-04-2016 IPR023214 HAD-like domain VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 Gene3D G3DSA:3.40.50.1000 602 750 6.7E-45 T 22-04-2016 IPR023214 HAD-like domain VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 Gene3D G3DSA:2.70.150.10 251 402 6.3E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 2.8E-5 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00943 Copper-transporting ATPase signature 276 295 2.8E-5 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 2.8E-5 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 2.8E-5 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 5.0E-24 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 5.0E-24 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 5.0E-24 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 5.0E-24 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 5.0E-24 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 Gene3D G3DSA:3.30.70.100 88 159 3.3E-16 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 SUPERFAMILY SSF55008 85 162 2.49E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 PANTHER PTHR24093:SF50 74 783 3.7E-189 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 4.8E-159 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 785 3.0E-121 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 2.7E-75 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 2.0E-29 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 3.1E-152 T 22-04-2016 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 2.0E-27 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 Pfam PF00122 E1-E2 ATPase 278 492 6.5E-56 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VP1539 f6937d74fb8f53d7f4bf48cab35b0272 787 SUPERFAMILY SSF81653 318 402 1.28E-22 T 22-04-2016 VP0301 4e07a7c81b08383ee4301e9dc6e816f2 242 PANTHER PTHR24220:SF578 10 229 5.7E-75 T 22-04-2016 VP0301 4e07a7c81b08383ee4301e9dc6e816f2 242 SMART SM00382 35 233 3.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0301 4e07a7c81b08383ee4301e9dc6e816f2 242 Gene3D G3DSA:3.40.50.300 8 228 3.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0301 4e07a7c81b08383ee4301e9dc6e816f2 242 SUPERFAMILY SSF52540 8 229 2.41E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0301 4e07a7c81b08383ee4301e9dc6e816f2 242 PANTHER PTHR24220 10 229 5.7E-75 T 22-04-2016 VP0301 4e07a7c81b08383ee4301e9dc6e816f2 242 Pfam PF00005 ABC transporter 30 185 1.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 SMART SM00518 12 288 1.8E-123 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 Gene3D G3DSA:3.20.20.150 11 287 7.3E-121 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 1.3E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 PANTHER PTHR21445 10 291 2.0E-160 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.318 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 PANTHER PTHR21445:SF0 10 291 2.0E-160 T 22-04-2016 VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 11 287 5.9E-108 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 SUPERFAMILY SSF51658 12 286 4.06E-100 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VP0498 7b6a43ed7a7ed8f91b82458681a252e8 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VP1258 be677324153b4f3063c077cf98d64db8 562 SUPERFAMILY SSF53223 4 267 7.91E-110 T 22-04-2016 VP1258 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 144 173 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 264 280 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 239 257 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 180 202 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 295 311 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 84 108 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 405 421 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.083 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 VP1258 be677324153b4f3063c077cf98d64db8 562 SUPERFAMILY SSF51735 268 559 2.33E-96 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1258 be677324153b4f3063c077cf98d64db8 562 Gene3D G3DSA:3.40.50.10380 14 265 8.8E-116 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 Gene3D G3DSA:3.40.50.720 266 559 4.0E-110 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1258 be677324153b4f3063c077cf98d64db8 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 6.4E-104 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 SMART SM00919 268 528 3.6E-134 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 SMART SM01274 78 258 1.5E-107 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 PANTHER PTHR23406:SF25 1 562 0.0 T 22-04-2016 VP1258 be677324153b4f3063c077cf98d64db8 562 PANTHER PTHR23406 1 562 0.0 T 22-04-2016 VP1258 be677324153b4f3063c077cf98d64db8 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 PIRSF PIRSF000106 2 560 6.2E-226 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP1258 be677324153b4f3063c077cf98d64db8 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 8.1E-78 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PANTHER PTHR22912 1 314 1.5E-166 T 22-04-2016 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PANTHER PTHR22912:SF48 1 314 1.5E-166 T 22-04-2016 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.2E-38 T 22-04-2016 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.2E-38 T 22-04-2016 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.2E-38 T 22-04-2016 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.2E-38 T 22-04-2016 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.2E-38 T 22-04-2016 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 SUPERFAMILY SSF51905 2 313 5.18E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 Gene3D G3DSA:3.50.50.60 120 233 5.7E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 Gene3D G3DSA:3.50.50.60 234 313 2.9E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 9.9E-125 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 Gene3D G3DSA:3.50.50.60 5 119 2.8E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1251 3710b49bef7253a38c6bc9d2d3222690 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.3E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0242 8fdc6eda9d12ca1b6650a23715dc657e 112 Pfam PF11333 Protein of unknown function (DUF3135) 12 91 5.9E-35 T 22-04-2016 IPR021482 Protein of unknown function DUF3135 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 Gene3D G3DSA:1.10.10.10 7 77 1.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2520 6f60030e8bc91aeb5afd6d326225c660 255 PANTHER PTHR11751 93 115 4.5E-47 T 22-04-2016 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 PANTHER PTHR11751 1 77 4.5E-47 T 22-04-2016 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 Gene3D G3DSA:1.20.120.530 98 238 9.3E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP2520 6f60030e8bc91aeb5afd6d326225c660 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 Pfam PF07729 FCD domain 99 226 2.0E-18 T 22-04-2016 IPR011711 GntR, C-terminal VP2520 6f60030e8bc91aeb5afd6d326225c660 255 PANTHER PTHR11751:SF355 93 115 4.5E-47 T 22-04-2016 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 PANTHER PTHR11751:SF355 1 77 4.5E-47 T 22-04-2016 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 SMART SM00345 15 74 9.1E-28 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.3E-25 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP2520 6f60030e8bc91aeb5afd6d326225c660 255 SMART SM00895 99 227 3.6E-18 T 22-04-2016 IPR011711 GntR, C-terminal VP2520 6f60030e8bc91aeb5afd6d326225c660 255 SUPERFAMILY SSF46785 5 76 2.06E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2520 6f60030e8bc91aeb5afd6d326225c660 255 SUPERFAMILY SSF48008 98 235 1.67E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP1976 e7d6af1ab77eeac711224feb223224d9 303 PANTHER PTHR30126 1 303 7.9E-184 T 22-04-2016 VP1976 e7d6af1ab77eeac711224feb223224d9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1976 e7d6af1ab77eeac711224feb223224d9 303 SUPERFAMILY SSF46785 1 112 2.18E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1976 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:1.10.10.10 1 87 1.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1976 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:3.40.190.10 90 180 8.9E-14 T 22-04-2016 VP1976 e7d6af1ab77eeac711224feb223224d9 303 SUPERFAMILY SSF53850 89 296 3.53E-40 T 22-04-2016 VP1976 e7d6af1ab77eeac711224feb223224d9 303 Pfam PF03466 LysR substrate binding domain 89 293 1.4E-41 T 22-04-2016 IPR005119 LysR, substrate-binding VP1976 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1976 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1976 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1976 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:3.40.190.10 181 266 3.1E-17 T 22-04-2016 VP1976 e7d6af1ab77eeac711224feb223224d9 303 PANTHER PTHR30126:SF25 1 303 7.9E-184 T 22-04-2016 VP0395 003c848671979ca37684264475b84b24 814 PANTHER PTHR30195 7 586 4.9E-53 T 22-04-2016 VP0395 003c848671979ca37684264475b84b24 814 PANTHER PTHR30195:SF3 7 586 4.9E-53 T 22-04-2016 VP0395 003c848671979ca37684264475b84b24 814 SUPERFAMILY SSF52540 395 527 2.6E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0395 003c848671979ca37684264475b84b24 814 SUPERFAMILY SSF52540 281 322 2.6E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0395 003c848671979ca37684264475b84b24 814 Pfam PF08463 EcoEI R protein C-terminal 656 811 3.7E-28 T 22-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 VP0395 003c848671979ca37684264475b84b24 814 Pfam PF04851 Type III restriction enzyme, res subunit 168 325 8.6E-42 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VP0395 003c848671979ca37684264475b84b24 814 Gene3D G3DSA:3.40.50.300 403 529 5.1E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0395 003c848671979ca37684264475b84b24 814 Pfam PF00271 Helicase conserved C-terminal domain 411 525 1.2E-6 T 22-04-2016 IPR001650 Helicase, C-terminal VP0395 003c848671979ca37684264475b84b24 814 SMART SM00487 165 360 7.9E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP0395 003c848671979ca37684264475b84b24 814 SUPERFAMILY SSF52540 137 364 3.66E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0395 003c848671979ca37684264475b84b24 814 Gene3D G3DSA:3.40.50.300 164 336 8.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0395 003c848671979ca37684264475b84b24 814 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 35 122 3.3E-9 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 SUPERFAMILY SSF64397 4 231 1.96E-75 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.477 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:3.55.30.10 3 175 1.3E-63 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 PANTHER PTHR30111 1 287 1.3E-75 T 22-04-2016 VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:3.90.1280.10 225 281 1.1E-21 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 PANTHER PTHR30111:SF1 1 287 1.3E-75 T 22-04-2016 VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 SUPERFAMILY SSF118352 223 281 1.44E-17 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 Pfam PF01430 Hsp33 protein 6 272 1.1E-77 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:1.10.287.480 176 224 1.8E-26 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain VP0130 ec65c3faa27e02fc4e883553bfb087b7 291 PIRSF PIRSF005261 1 284 4.6E-69 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VP2381 438090d1d51014853456bd7f87d89d1c 351 Gene3D G3DSA:3.20.20.190 22 349 8.4E-89 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VP2381 438090d1d51014853456bd7f87d89d1c 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 1.9E-63 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VP2381 438090d1d51014853456bd7f87d89d1c 351 PANTHER PTHR23344 23 351 5.3E-108 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 VP2381 438090d1d51014853456bd7f87d89d1c 351 SUPERFAMILY SSF51695 22 349 6.02E-90 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VP2381 438090d1d51014853456bd7f87d89d1c 351 PANTHER PTHR23344:SF7 23 351 5.3E-108 T 22-04-2016 VP2856 e1a226f357b9c8849e27543acc987537 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 4.9E-26 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VP2856 e1a226f357b9c8849e27543acc987537 302 PANTHER PTHR11562:SF55 1 300 1.8E-115 T 22-04-2016 VP2856 e1a226f357b9c8849e27543acc987537 302 Gene3D G3DSA:3.30.70.1350 207 288 2.8E-30 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VP2856 e1a226f357b9c8849e27543acc987537 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 3.4E-68 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VP2856 e1a226f357b9c8849e27543acc987537 302 SUPERFAMILY SSF161111 8 207 7.19E-50 T 22-04-2016 VP2856 e1a226f357b9c8849e27543acc987537 302 Pfam PF01545 Cation efflux family 15 206 1.5E-42 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VP2856 e1a226f357b9c8849e27543acc987537 302 Gene3D G3DSA:1.20.1510.10 11 206 2.3E-41 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain VP2856 e1a226f357b9c8849e27543acc987537 302 SUPERFAMILY SSF160240 210 287 3.66E-24 T 22-04-2016 VP2856 e1a226f357b9c8849e27543acc987537 302 PANTHER PTHR11562 1 300 1.8E-115 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VP2613 515170003381595f687df469bea2cfd2 141 Gene3D G3DSA:3.30.420.140 3 137 1.7E-40 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VP2613 515170003381595f687df469bea2cfd2 141 PANTHER PTHR33317 4 139 1.3E-38 T 22-04-2016 VP2613 515170003381595f687df469bea2cfd2 141 Pfam PF03652 Holliday junction resolvase 4 136 1.6E-35 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VP2613 515170003381595f687df469bea2cfd2 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.6E-48 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VP2613 515170003381595f687df469bea2cfd2 141 SMART SM00732 3 104 3.9E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VP2613 515170003381595f687df469bea2cfd2 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.052 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VP2613 515170003381595f687df469bea2cfd2 141 SUPERFAMILY SSF53098 3 136 1.24E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 Pfam PF05971 Protein of unknown function (DUF890) 55 364 3.7E-129 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 Gene3D G3DSA:3.40.50.150 148 352 6.0E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 SUPERFAMILY SSF53335 94 363 6.46E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 PANTHER PTHR13393 43 259 3.0E-122 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 PANTHER PTHR13393 277 368 3.0E-122 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 56 366 54.285 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 PIRSF PIRSF029038 45 375 8.3E-163 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 PANTHER PTHR13393:SF0 43 259 3.0E-122 T 22-04-2016 VP1324 3514dcb3dd288a1c4ecc1b6833f1ca36 375 PANTHER PTHR13393:SF0 277 368 3.0E-122 T 22-04-2016 VP0293 e83f318598ff96a41e2839f641fa383e 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 2.1E-44 T 22-04-2016 VP0293 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF50465 332 434 4.12E-30 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VP0293 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:2.40.30.10 243 359 6.0E-20 T 22-04-2016 VP0293 e83f318598ff96a41e2839f641fa383e 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VP0293 e83f318598ff96a41e2839f641fa383e 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 2.3E-197 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VP0293 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF50447 243 324 1.72E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP0293 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0293 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0293 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0293 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0293 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0293 e83f318598ff96a41e2839f641fa383e 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 2.3E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP0293 e83f318598ff96a41e2839f641fa383e 476 PANTHER PTHR23115 11 359 2.6E-76 T 22-04-2016 VP0293 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:3.40.50.300 18 234 3.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0293 e83f318598ff96a41e2839f641fa383e 476 PANTHER PTHR23115:SF91 11 359 2.6E-76 T 22-04-2016 VP0293 e83f318598ff96a41e2839f641fa383e 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.679 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VP0293 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF52540 18 235 1.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 SUPERFAMILY SSF103190 64 175 6.28E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 PANTHER PTHR32089:SF59 1 626 1.1E-171 T 22-04-2016 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 Gene3D G3DSA:3.30.450.20 136 270 2.4E-23 T 22-04-2016 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 SMART SM00304 295 349 9.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 SUPERFAMILY SSF58104 317 626 3.01E-73 T 22-04-2016 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 Gene3D G3DSA:1.10.287.950 379 591 2.7E-56 T 22-04-2016 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF02743 Cache domain 38 258 5.2E-26 T 22-04-2016 IPR033479 Double Cache domain 1 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF00672 HAMP domain 277 345 2.8E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 SMART SM00283 364 625 5.9E-67 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 PANTHER PTHR32089 1 626 1.1E-171 T 22-04-2016 VP2827 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 624 5.2E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1235 a009024f4c4e180876c853a864f50d98 439 SUPERFAMILY SSF56796 27 407 3.93E-87 T 22-04-2016 VP1235 a009024f4c4e180876c853a864f50d98 439 Pfam PF00465 Iron-containing alcohol dehydrogenase 35 399 3.4E-88 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VP1235 a009024f4c4e180876c853a864f50d98 439 PANTHER PTHR11496 28 413 1.8E-141 T 22-04-2016 VP1235 a009024f4c4e180876c853a864f50d98 439 Gene3D G3DSA:1.20.1090.10 215 408 2.8E-39 T 22-04-2016 VP1235 a009024f4c4e180876c853a864f50d98 439 PANTHER PTHR11496:SF68 28 413 1.8E-141 T 22-04-2016 VP1235 a009024f4c4e180876c853a864f50d98 439 Gene3D G3DSA:3.40.50.1970 28 206 1.6E-48 T 22-04-2016 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.40.190.10 198 277 2.3E-27 T 22-04-2016 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 PANTHER PTHR21022:SF0 1 383 2.2E-158 T 22-04-2016 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 PIRSF PIRSF001500 1 384 5.4E-143 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.30.70.260 299 381 3.0E-28 T 22-04-2016 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 Pfam PF00800 Prephenate dehydratase 110 291 3.7E-60 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 PANTHER PTHR21022 1 383 2.2E-158 T 22-04-2016 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF53850 109 295 3.8E-56 T 22-04-2016 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.40.190.10 111 197 1.6E-31 T 22-04-2016 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 7.1E-27 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 Pfam PF01817 Chorismate mutase type II 12 91 2.8E-16 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:1.20.59.10 4 110 1.5E-40 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF48600 7 95 7.51E-19 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 SMART SM00830 12 93 1.4E-21 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF55021 284 381 2.37E-26 T 22-04-2016 VP0555 b59f8a53ea2bc8ae2de550875455e6e9 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VP3065 b0157d2d599402fbefc668a077f98f83 258 Gene3D G3DSA:3.40.190.10 123 207 1.3E-6 T 22-04-2016 VP3065 b0157d2d599402fbefc668a077f98f83 258 SUPERFAMILY SSF53850 1 256 2.44E-50 T 22-04-2016 VP3065 b0157d2d599402fbefc668a077f98f83 258 SMART SM00062 33 257 2.3E-38 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP3065 b0157d2d599402fbefc668a077f98f83 258 Gene3D G3DSA:3.40.190.10 30 119 4.9E-28 T 22-04-2016 VP3065 b0157d2d599402fbefc668a077f98f83 258 Gene3D G3DSA:3.40.190.10 216 255 4.9E-28 T 22-04-2016 VP3065 b0157d2d599402fbefc668a077f98f83 258 PANTHER PTHR18966 21 253 6.0E-27 T 22-04-2016 VP3065 b0157d2d599402fbefc668a077f98f83 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VP3065 b0157d2d599402fbefc668a077f98f83 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 2.3E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP3065 b0157d2d599402fbefc668a077f98f83 258 PANTHER PTHR18966:SF243 21 253 6.0E-27 T 22-04-2016 VP1502 9b506ec64178db82335c0677a75304c5 483 Gene3D G3DSA:1.10.10.60 424 475 5.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1502 9b506ec64178db82335c0677a75304c5 483 SMART SM00448 16 127 8.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1502 9b506ec64178db82335c0677a75304c5 483 SUPERFAMILY SSF52172 16 199 2.42E-38 T 22-04-2016 IPR011006 CheY-like superfamily VP1502 9b506ec64178db82335c0677a75304c5 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 8.767773E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1502 9b506ec64178db82335c0677a75304c5 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 8.767773E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1502 9b506ec64178db82335c0677a75304c5 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP1502 9b506ec64178db82335c0677a75304c5 483 SUPERFAMILY SSF46689 426 475 2.06E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1502 9b506ec64178db82335c0677a75304c5 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP1502 9b506ec64178db82335c0677a75304c5 483 PANTHER PTHR32071:SF18 1 474 6.9E-208 T 22-04-2016 VP1502 9b506ec64178db82335c0677a75304c5 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP1502 9b506ec64178db82335c0677a75304c5 483 Pfam PF00072 Response regulator receiver domain 18 127 7.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1502 9b506ec64178db82335c0677a75304c5 483 Gene3D G3DSA:1.10.8.60 327 386 6.7E-17 T 22-04-2016 VP1502 9b506ec64178db82335c0677a75304c5 483 SUPERFAMILY SSF52540 154 384 3.92E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1502 9b506ec64178db82335c0677a75304c5 483 Gene3D G3DSA:3.40.50.300 152 326 5.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1502 9b506ec64178db82335c0677a75304c5 483 SMART SM00382 175 321 2.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1502 9b506ec64178db82335c0677a75304c5 483 Pfam PF00158 Sigma-54 interaction domain 155 321 1.2E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP1502 9b506ec64178db82335c0677a75304c5 483 PANTHER PTHR32071 1 474 6.9E-208 T 22-04-2016 VP1502 9b506ec64178db82335c0677a75304c5 483 Gene3D G3DSA:3.40.50.2300 15 148 6.9E-32 T 22-04-2016 VP1502 9b506ec64178db82335c0677a75304c5 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 1.0E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0069 ec66f06c03285be91c504f0adaf390fe 279 PANTHER PTHR37426 2 279 3.7E-157 T 22-04-2016 VP0069 ec66f06c03285be91c504f0adaf390fe 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.412 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VP0069 ec66f06c03285be91c504f0adaf390fe 279 SUPERFAMILY SSF53335 9 273 5.32E-96 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0069 ec66f06c03285be91c504f0adaf390fe 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 8.2E-116 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VP0069 ec66f06c03285be91c504f0adaf390fe 279 Gene3D G3DSA:3.40.50.150 1 279 1.6E-115 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0069 ec66f06c03285be91c504f0adaf390fe 279 PANTHER PTHR37426:SF1 2 279 3.7E-157 T 22-04-2016 VP1631 a101b80b8e197dd6ae6b31e1a2c90ddd 452 Pfam PF02321 Outer membrane efflux protein 249 432 8.8E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP1631 a101b80b8e197dd6ae6b31e1a2c90ddd 452 Pfam PF02321 Outer membrane efflux protein 39 227 6.0E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP1631 a101b80b8e197dd6ae6b31e1a2c90ddd 452 PANTHER PTHR30026:SF4 28 452 2.9E-97 T 22-04-2016 VP1631 a101b80b8e197dd6ae6b31e1a2c90ddd 452 Gene3D G3DSA:1.20.1600.10 37 435 1.2E-67 T 22-04-2016 VP1631 a101b80b8e197dd6ae6b31e1a2c90ddd 452 PANTHER PTHR30026 28 452 2.9E-97 T 22-04-2016 VP1631 a101b80b8e197dd6ae6b31e1a2c90ddd 452 SUPERFAMILY SSF56954 12 435 4.32E-89 T 22-04-2016 VP1631 a101b80b8e197dd6ae6b31e1a2c90ddd 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 37 444 5.1E-116 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 SUPERFAMILY SSF64518 172 411 1.83E-26 T 22-04-2016 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 SUPERFAMILY SSF64518 537 645 1.83E-26 T 22-04-2016 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 600 645 7.3E-9 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 PANTHER PTHR30033:SF1 1 418 4.4E-102 T 22-04-2016 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 PANTHER PTHR30033:SF1 445 646 4.4E-102 T 22-04-2016 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 2.0E-8 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.0E-8 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 2.0E-8 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.0E-8 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 PANTHER PTHR30033 1 418 4.4E-102 T 22-04-2016 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 PANTHER PTHR30033 445 646 4.4E-102 T 22-04-2016 VP0785 5754b748594291b8c7c7a8fcaafe08e1 646 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 328 9.4E-61 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 PANTHER PTHR24322 7 174 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 Pfam PF00106 short chain dehydrogenase 4 183 2.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 SUPERFAMILY SSF51735 3 236 5.37E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 Gene3D G3DSA:3.40.50.720 2 191 5.3E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 2.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1120 0c1bf6af7f4abe9cab4a3c5a58553d3e 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 2.6E-294 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.507 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 844 5.3E-27 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 SUPERFAMILY SSF47323 657 933 5.79E-75 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PANTHER PTHR11946:SF11 288 907 0.0 T 22-04-2016 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PANTHER PTHR11946:SF11 237 262 0.0 T 22-04-2016 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PANTHER PTHR11946:SF11 6 215 0.0 T 22-04-2016 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 Gene3D G3DSA:1.10.730.10 647 792 7.4E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 SUPERFAMILY SSF52374 408 652 5.36E-138 T 22-04-2016 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 SUPERFAMILY SSF52374 4 202 5.36E-138 T 22-04-2016 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 2.4E-229 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 Gene3D G3DSA:3.40.50.620 408 641 2.7E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 Gene3D G3DSA:3.40.50.620 17 205 2.7E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 SUPERFAMILY SSF50677 203 408 5.76E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 Pfam PF06827 Zinc finger found in FPG and IleRS 903 930 5.1E-6 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PANTHER PTHR11946 288 907 0.0 T 22-04-2016 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PANTHER PTHR11946 237 262 0.0 T 22-04-2016 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 PANTHER PTHR11946 6 215 0.0 T 22-04-2016 VP0534 9dea6065fd7490db95c11adb4bbbe6e7 942 Gene3D G3DSA:3.90.740.10 207 394 5.4E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VP1111 04bfe8cd7e4c36f0ea4b9065c7918139 88 SUPERFAMILY SSF57716 38 70 6.41E-7 T 22-04-2016 VP1111 04bfe8cd7e4c36f0ea4b9065c7918139 88 PANTHER PTHR38777 2 88 5.8E-24 T 22-04-2016 VP1111 04bfe8cd7e4c36f0ea4b9065c7918139 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 1.8E-13 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VP1111 04bfe8cd7e4c36f0ea4b9065c7918139 88 PANTHER PTHR38777:SF1 2 88 5.8E-24 T 22-04-2016 VP2931 4185d78b54bfa78014ef7701058c2c14 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 318 1.4E-66 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VP2931 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:3.30.930.10 74 270 1.1E-58 T 22-04-2016 VP2931 4185d78b54bfa78014ef7701058c2c14 321 PANTHER PTHR12835 1 318 8.5E-83 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VP2931 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF46785 7 62 4.31E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2931 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:2.30.30.100 272 319 2.1E-20 T 22-04-2016 VP2931 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF55681 72 269 1.21E-60 T 22-04-2016 VP2931 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 208 4.8E-20 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VP2931 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:1.10.10.10 4 64 4.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2931 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF08279 HTH domain 9 60 2.5E-12 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 VP2931 4185d78b54bfa78014ef7701058c2c14 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.586 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VP2931 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 3.5E-11 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 VP2931 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF50037 272 318 1.05E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal VP0367 b7818038659f23adf58ed1bd9f44b898 641 SUPERFAMILY SSF52540 342 574 6.66E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0367 b7818038659f23adf58ed1bd9f44b898 641 Gene3D G3DSA:3.30.450.20 219 308 2.2E-8 T 22-04-2016 VP0367 b7818038659f23adf58ed1bd9f44b898 641 SUPERFAMILY SSF55785 220 307 1.07E-6 T 22-04-2016 IPR000014 PAS domain VP0367 b7818038659f23adf58ed1bd9f44b898 641 Pfam PF00158 Sigma-54 interaction domain 342 497 3.0E-32 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP0367 b7818038659f23adf58ed1bd9f44b898 641 Pfam PF02954 Bacterial regulatory protein, Fis family 591 632 1.1E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0367 b7818038659f23adf58ed1bd9f44b898 641 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 418 433 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP0367 b7818038659f23adf58ed1bd9f44b898 641 Gene3D G3DSA:3.40.50.300 337 504 7.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0367 b7818038659f23adf58ed1bd9f44b898 641 PANTHER PTHR32071:SF16 286 637 2.0E-80 T 22-04-2016 VP0367 b7818038659f23adf58ed1bd9f44b898 641 Gene3D G3DSA:1.10.10.60 580 634 5.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0367 b7818038659f23adf58ed1bd9f44b898 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 362 375 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP0367 b7818038659f23adf58ed1bd9f44b898 641 SUPERFAMILY SSF46689 581 634 9.86E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0367 b7818038659f23adf58ed1bd9f44b898 641 PANTHER PTHR32071 286 637 2.0E-80 T 22-04-2016 VP0367 b7818038659f23adf58ed1bd9f44b898 641 Gene3D G3DSA:1.10.8.60 505 578 1.1E-14 T 22-04-2016 VP1760 7214626114f852038e342ef336184a23 181 SUPERFAMILY SSF55154 11 179 1.64E-38 T 22-04-2016 IPR033469 CYTH-like domain VP1760 7214626114f852038e342ef336184a23 181 Gene3D G3DSA:2.40.320.10 11 180 1.9E-36 T 22-04-2016 IPR023577 CYTH domain VP1760 7214626114f852038e342ef336184a23 181 PANTHER PTHR21028:SF2 4 179 7.3E-37 T 22-04-2016 VP1760 7214626114f852038e342ef336184a23 181 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 11 180 4.8E-17 T 22-04-2016 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 VP1760 7214626114f852038e342ef336184a23 181 SMART SM01118 10 181 8.6E-16 T 22-04-2016 IPR023577 CYTH domain VP1760 7214626114f852038e342ef336184a23 181 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 156 6.0E-8 T 22-04-2016 VP1760 7214626114f852038e342ef336184a23 181 Pfam PF01928 CYTH domain 11 175 5.1E-18 T 22-04-2016 IPR023577 CYTH domain VP1760 7214626114f852038e342ef336184a23 181 PANTHER PTHR21028 4 179 7.3E-37 T 22-04-2016 VP0690 97ef3e0d2ed32278d54a67403e69bf8e 315 SUPERFAMILY SSF103088 183 300 6.02E-30 T 22-04-2016 IPR006665 OmpA-like domain VP0690 97ef3e0d2ed32278d54a67403e69bf8e 315 PANTHER PTHR30329:SF4 106 313 7.5E-105 T 22-04-2016 VP0690 97ef3e0d2ed32278d54a67403e69bf8e 315 PANTHER PTHR30329:SF4 6 71 7.5E-105 T 22-04-2016 VP0690 97ef3e0d2ed32278d54a67403e69bf8e 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain VP0690 97ef3e0d2ed32278d54a67403e69bf8e 315 PANTHER PTHR30329 106 313 7.5E-105 T 22-04-2016 VP0690 97ef3e0d2ed32278d54a67403e69bf8e 315 PANTHER PTHR30329 6 71 7.5E-105 T 22-04-2016 VP0690 97ef3e0d2ed32278d54a67403e69bf8e 315 Pfam PF00691 OmpA family 196 294 1.8E-17 T 22-04-2016 IPR006665 OmpA-like domain VP0690 97ef3e0d2ed32278d54a67403e69bf8e 315 Gene3D G3DSA:3.30.1330.60 172 300 8.2E-31 T 22-04-2016 IPR006665 OmpA-like domain VP2556 4dfe649e3e87f7fdc2b0b530222610e5 258 Gene3D G3DSA:3.40.1210.10 11 255 1.8E-90 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VP2556 4dfe649e3e87f7fdc2b0b530222610e5 258 Pfam PF01975 Survival protein SurE 13 191 8.9E-60 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VP2556 4dfe649e3e87f7fdc2b0b530222610e5 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 1.0E-73 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VP2556 4dfe649e3e87f7fdc2b0b530222610e5 258 SUPERFAMILY SSF64167 11 256 2.09E-86 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VP2556 4dfe649e3e87f7fdc2b0b530222610e5 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 41.087 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VP2556 4dfe649e3e87f7fdc2b0b530222610e5 258 PANTHER PTHR30457 11 254 4.7E-101 T 22-04-2016 VP0793 5cef2448e92803417a3f4397cd74a868 169 SUPERFAMILY SSF51261 18 166 3.31E-55 T 22-04-2016 IPR011055 Duplicated hybrid motif VP0793 5cef2448e92803417a3f4397cd74a868 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.6E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP0793 5cef2448e92803417a3f4397cd74a868 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP0793 5cef2448e92803417a3f4397cd74a868 169 PANTHER PTHR30175 1 118 2.1E-55 T 22-04-2016 VP0793 5cef2448e92803417a3f4397cd74a868 169 Gene3D G3DSA:2.70.70.10 17 166 7.7E-60 T 22-04-2016 VP0793 5cef2448e92803417a3f4397cd74a868 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.8E-50 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 1.9E-49 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 Gene3D G3DSA:3.30.1850.10 1 113 6.7E-56 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 Pfam PF03641 Possible lysine decarboxylase 187 326 1.5E-35 T 22-04-2016 IPR031100 LOG family VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 SUPERFAMILY SSF102405 119 327 1.16E-42 T 22-04-2016 VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 PANTHER PTHR31223 356 381 7.5E-174 T 22-04-2016 VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 PANTHER PTHR31223 83 339 7.5E-174 T 22-04-2016 VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 PANTHER PTHR31223:SF12 356 381 7.5E-174 T 22-04-2016 VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 PANTHER PTHR31223:SF12 83 339 7.5E-174 T 22-04-2016 VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 Gene3D G3DSA:3.40.50.450 123 450 1.1E-123 T 22-04-2016 VP0698 b8be7103fdb9c5b5826dcb439e3f772e 453 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 1.4E-55 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 PANTHER PTHR11136:SF0 8 420 1.2E-123 T 22-04-2016 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 Gene3D G3DSA:3.90.190.20 288 417 2.4E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 SUPERFAMILY SSF53623 15 285 2.09E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 PIRSF PIRSF001563 7 420 1.5E-103 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 9.3E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 Pfam PF08245 Mur ligase middle domain 54 192 1.1E-6 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 PANTHER PTHR11136 8 420 1.2E-123 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 SUPERFAMILY SSF53244 288 416 3.05E-32 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 4.5E-104 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 VP2188 f1ad2fdd2736acff3ef679a58892b40f 420 Gene3D G3DSA:3.40.1190.10 13 286 6.2E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP3061 445ce5f18d32be21285738523b871174 613 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 VP3061 445ce5f18d32be21285738523b871174 613 PANTHER PTHR21000:SF11 406 613 0.0 T 22-04-2016 VP3061 445ce5f18d32be21285738523b871174 613 SUPERFAMILY SSF143975 3 420 4.71E-136 T 22-04-2016 VP3061 445ce5f18d32be21285738523b871174 613 Pfam PF00920 Dehydratase family 34 604 5.7E-220 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP3061 445ce5f18d32be21285738523b871174 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.4E-267 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP3061 445ce5f18d32be21285738523b871174 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP3061 445ce5f18d32be21285738523b871174 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP3061 445ce5f18d32be21285738523b871174 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.358 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP3061 445ce5f18d32be21285738523b871174 613 SUPERFAMILY SSF52016 421 608 9.42E-62 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VP3061 445ce5f18d32be21285738523b871174 613 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP3061 445ce5f18d32be21285738523b871174 613 PANTHER PTHR21000 406 613 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0281 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 VP0281 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 102 190 7.1E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0281 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VP0281 320fb20e346661184450aecd575cb715 206 PANTHER PTHR11831 1 206 4.9E-94 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 VP0281 320fb20e346661184450aecd575cb715 206 PANTHER PTHR11831:SF4 1 206 4.9E-94 T 22-04-2016 VP0281 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 101 4.7E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VP0281 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 22-04-2016 VP0281 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VP0281 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VP0281 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-30 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VP0281 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0281 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0058 5d05ac318d31c1d921a68375a47c2528 369 Gene3D G3DSA:3.40.50.2300 100 211 2.3E-37 T 22-04-2016 VP0058 5d05ac318d31c1d921a68375a47c2528 369 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 102 347 6.8E-28 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain VP0058 5d05ac318d31c1d921a68375a47c2528 369 SMART SM00354 43 113 2.6E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0058 5d05ac318d31c1d921a68375a47c2528 369 Gene3D G3DSA:3.40.50.2300 212 369 4.7E-42 T 22-04-2016 VP0058 5d05ac318d31c1d921a68375a47c2528 369 PANTHER PTHR30146 43 369 1.3E-165 T 22-04-2016 VP0058 5d05ac318d31c1d921a68375a47c2528 369 ProSitePatterns PS00356 LacI-type HTH domain signature. 46 64 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0058 5d05ac318d31c1d921a68375a47c2528 369 SUPERFAMILY SSF47413 43 101 2.35E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0058 5d05ac318d31c1d921a68375a47c2528 369 Gene3D G3DSA:1.10.260.40 43 98 5.2E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0058 5d05ac318d31c1d921a68375a47c2528 369 Pfam PF00356 Bacterial regulatory proteins, lacI family 45 90 3.2E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0058 5d05ac318d31c1d921a68375a47c2528 369 PANTHER PTHR30146:SF2 43 369 1.3E-165 T 22-04-2016 VP0058 5d05ac318d31c1d921a68375a47c2528 369 SUPERFAMILY SSF53822 101 355 2.57E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP1132 00d178314ba1d6efd52a463da030d502 434 Gene3D G3DSA:3.30.1110.10 45 95 5.6E-5 T 22-04-2016 VP1132 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584 17 293 6.0E-243 T 22-04-2016 VP1132 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584 332 376 6.0E-243 T 22-04-2016 VP1132 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584 393 434 6.0E-243 T 22-04-2016 VP1132 00d178314ba1d6efd52a463da030d502 434 SUPERFAMILY SSF53613 338 417 1.77E-44 T 22-04-2016 IPR029056 Ribokinase-like VP1132 00d178314ba1d6efd52a463da030d502 434 SUPERFAMILY SSF53613 31 305 1.77E-44 T 22-04-2016 IPR029056 Ribokinase-like VP1132 00d178314ba1d6efd52a463da030d502 434 Gene3D G3DSA:3.40.1190.20 337 434 7.8E-45 T 22-04-2016 IPR029056 Ribokinase-like VP1132 00d178314ba1d6efd52a463da030d502 434 Gene3D G3DSA:3.40.1190.20 96 298 7.8E-45 T 22-04-2016 IPR029056 Ribokinase-like VP1132 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584:SF202 17 293 6.0E-243 T 22-04-2016 VP1132 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584:SF202 332 376 6.0E-243 T 22-04-2016 VP1132 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584:SF202 393 434 6.0E-243 T 22-04-2016 VP1132 00d178314ba1d6efd52a463da030d502 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 1.1E-11 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 PIRSF PIRSF001491 1 406 3.2E-160 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 Gene3D G3DSA:3.30.70.1250 115 234 1.6E-50 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.81 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 Pfam PF01676 Metalloenzyme superfamily 2 397 6.1E-42 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 SUPERFAMILY SSF143856 118 234 9.02E-48 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 PANTHER PTHR21110:SF0 2 406 3.4E-158 T 22-04-2016 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 2.3E-176 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 PANTHER PTHR21110 2 406 3.4E-158 T 22-04-2016 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 SUPERFAMILY SSF53649 1 115 1.23E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 SUPERFAMILY SSF53649 236 406 1.23E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 Gene3D G3DSA:3.40.720.10 1 114 5.9E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP2434 162e9f2a6ccdf641af9ff44a56cecb20 406 Gene3D G3DSA:3.40.720.10 239 406 5.9E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP0975 f858c85d04ce048790510bb524eb2c25 1153 SMART SM01058 479 576 5.0E-53 T 22-04-2016 IPR003711 CarD-like/TRCF domain VP0975 f858c85d04ce048790510bb524eb2c25 1153 SMART SM00490 826 910 5.4E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VP0975 f858c85d04ce048790510bb524eb2c25 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 8.2E-21 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP0975 f858c85d04ce048790510bb524eb2c25 1153 SMART SM00487 600 790 1.9E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP0975 f858c85d04ce048790510bb524eb2c25 1153 Gene3D G3DSA:3.40.50.300 591 786 2.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0975 f858c85d04ce048790510bb524eb2c25 1153 SUPERFAMILY SSF52540 523 783 2.78E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0975 f858c85d04ce048790510bb524eb2c25 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 8.7E-26 T 22-04-2016 IPR003711 CarD-like/TRCF domain VP0975 f858c85d04ce048790510bb524eb2c25 1153 PANTHER PTHR14025 384 1152 0.0 T 22-04-2016 VP0975 f858c85d04ce048790510bb524eb2c25 1153 Pfam PF03461 TRCF domain 1009 1101 1.2E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VP0975 f858c85d04ce048790510bb524eb2c25 1153 SUPERFAMILY SSF52540 782 990 5.97E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0975 f858c85d04ce048790510bb524eb2c25 1153 SMART SM00982 1008 1108 8.0E-47 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VP0975 f858c85d04ce048790510bb524eb2c25 1153 SUPERFAMILY SSF143517 995 1147 2.88E-43 T 22-04-2016 VP0975 f858c85d04ce048790510bb524eb2c25 1153 Gene3D G3DSA:3.40.50.300 789 963 3.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0975 f858c85d04ce048790510bb524eb2c25 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1110 28.986 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VP0975 f858c85d04ce048790510bb524eb2c25 1153 Gene3D G3DSA:3.30.2060.10 132 207 9.7E-16 T 22-04-2016 VP0975 f858c85d04ce048790510bb524eb2c25 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VP0975 f858c85d04ce048790510bb524eb2c25 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 3.5E-17 T 22-04-2016 IPR001650 Helicase, C-terminal VP0975 f858c85d04ce048790510bb524eb2c25 1153 SUPERFAMILY SSF141259 470 548 5.23E-25 T 22-04-2016 IPR003711 CarD-like/TRCF domain VP0975 f858c85d04ce048790510bb524eb2c25 1153 PANTHER PTHR14025:SF21 384 1152 0.0 T 22-04-2016 VP0975 f858c85d04ce048790510bb524eb2c25 1153 SUPERFAMILY SSF52540 11 342 5.13E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0975 f858c85d04ce048790510bb524eb2c25 1153 SUPERFAMILY SSF52540 351 466 2.02E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 Gene3D G3DSA:3.30.428.10 3 111 2.0E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 Pfam PF01230 HIT domain 12 109 2.4E-29 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PANTHER PTHR23089:SF2 2 112 7.1E-51 T 22-04-2016 VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 27 45 2.2E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 95 105 2.2E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 6 22 2.2E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PANTHER PTHR23089 2 112 7.1E-51 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP0964 1f0b8cc0aedb7bf7c4e0efe24837c777 116 SUPERFAMILY SSF54197 2 112 3.56E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP1028 7a371427c76d7e8441938a3d2ff908b2 196 SUPERFAMILY SSF159894 5 103 8.37E-31 T 22-04-2016 VP1028 7a371427c76d7e8441938a3d2ff908b2 196 Pfam PF04994 TfoX C-terminal domain 115 193 4.2E-31 T 22-04-2016 IPR007077 TfoX, C-terminal VP1028 7a371427c76d7e8441938a3d2ff908b2 196 Gene3D G3DSA:1.10.150.20 114 193 4.7E-29 T 22-04-2016 VP1028 7a371427c76d7e8441938a3d2ff908b2 196 PIRSF PIRSF028788 1 196 4.7E-48 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VP1028 7a371427c76d7e8441938a3d2ff908b2 196 PANTHER PTHR36121:SF1 1 193 1.1E-49 T 22-04-2016 VP1028 7a371427c76d7e8441938a3d2ff908b2 196 Gene3D G3DSA:3.30.1460.30 3 104 9.9E-37 T 22-04-2016 IPR007076 TfoX, N-terminal VP1028 7a371427c76d7e8441938a3d2ff908b2 196 Pfam PF04993 TfoX N-terminal domain 12 103 2.4E-30 T 22-04-2016 IPR007076 TfoX, N-terminal VP1028 7a371427c76d7e8441938a3d2ff908b2 196 PANTHER PTHR36121 1 193 1.1E-49 T 22-04-2016 VP1108 c94b4487867bd09d906308391a7e5a94 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.205 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 8.3E-172 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 PIRSF PIRSF001529 1 435 1.0E-186 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 6.6E-35 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1108 c94b4487867bd09d906308391a7e5a94 435 SUPERFAMILY SSF55681 118 429 3.23E-97 T 22-04-2016 VP1108 c94b4487867bd09d906308391a7e5a94 435 SUPERFAMILY SSF46589 1 114 2.93E-27 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VP1108 c94b4487867bd09d906308391a7e5a94 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.5E-29 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 Gene3D G3DSA:3.30.930.10 107 431 2.8E-138 T 22-04-2016 VP1108 c94b4487867bd09d906308391a7e5a94 435 PANTHER PTHR11778:SF0 1 434 8.0E-210 T 22-04-2016 VP1108 c94b4487867bd09d906308391a7e5a94 435 PANTHER PTHR11778 1 434 8.0E-210 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VP1108 c94b4487867bd09d906308391a7e5a94 435 Gene3D G3DSA:1.10.287.40 1 106 5.6E-23 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:3.40.50.300 4 211 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2770 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2770 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.0E-58 T 22-04-2016 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 5.8E-231 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.642 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.7E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VP2770 13bdf0f2ca82a8f29c573001058f196e 394 PANTHER PTHR23115:SF151 1 392 4.5E-283 T 22-04-2016 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:2.40.30.10 300 392 5.2E-47 T 22-04-2016 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:2.40.30.10 212 298 2.3E-35 T 22-04-2016 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF50465 298 393 1.61E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VP2770 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.8E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.8E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 PANTHER PTHR23115 1 392 4.5E-283 T 22-04-2016 VP2770 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF52540 6 219 5.86E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2770 13bdf0f2ca82a8f29c573001058f196e 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 Gene3D G3DSA:1.10.287.130 335 385 1.7E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 Gene3D G3DSA:3.40.50.2300 5 129 4.6E-6 T 22-04-2016 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 SMART SM00387 528 641 1.8E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 SUPERFAMILY SSF52172 3 135 2.33E-6 T 22-04-2016 IPR011006 CheY-like superfamily VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 SMART SM00100 176 301 0.0017 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 SUPERFAMILY SSF47384 335 374 1.2E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PANTHER PTHR24423:SF497 1 12 1.1E-51 T 22-04-2016 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 Gene3D G3DSA:2.60.120.10 202 311 1.1E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 1.4E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 SUPERFAMILY SSF51206 201 311 1.31E-20 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 Gene3D G3DSA:3.30.565.10 486 641 3.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 368 9.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PANTHER PTHR24423 317 368 1.1E-51 T 22-04-2016 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PANTHER PTHR24423:SF497 451 644 1.1E-51 T 22-04-2016 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PANTHER PTHR24423:SF497 317 368 1.1E-51 T 22-04-2016 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PANTHER PTHR24423 451 644 1.1E-51 T 22-04-2016 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 PANTHER PTHR24423 1 12 1.1E-51 T 22-04-2016 VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 1.8E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1245 e18ea9e3f1b96863518b0d889a6fbfc2 646 SUPERFAMILY SSF55874 480 639 1.96E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0445 53ad19563696a271fb54b0333fe7f4df 160 Gene3D G3DSA:2.30.30.220 4 110 2.7E-52 T 22-04-2016 IPR007481 Stringent starvation protein B VP0445 53ad19563696a271fb54b0333fe7f4df 160 PIRSF PIRSF005276 3 160 2.8E-64 T 22-04-2016 IPR007481 Stringent starvation protein B VP0445 53ad19563696a271fb54b0333fe7f4df 160 SUPERFAMILY SSF101738 4 121 1.57E-50 T 22-04-2016 IPR007481 Stringent starvation protein B VP0445 53ad19563696a271fb54b0333fe7f4df 160 PANTHER PTHR37486:SF1 2 160 9.9E-80 T 22-04-2016 VP0445 53ad19563696a271fb54b0333fe7f4df 160 Pfam PF04386 Stringent starvation protein B 9 160 1.5E-43 T 22-04-2016 IPR007481 Stringent starvation protein B VP0445 53ad19563696a271fb54b0333fe7f4df 160 PANTHER PTHR37486 2 160 9.9E-80 T 22-04-2016 VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 PANTHER PTHR11444:SF25 3 482 2.1E-293 T 22-04-2016 VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.10.40.30 421 471 8.7E-20 T 22-04-2016 VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 Pfam PF00206 Lyase 23 355 5.7E-106 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.20.200.10 153 415 2.3E-87 T 22-04-2016 VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 3.0E-253 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 Pfam PF10415 Fumarase C C-terminus 421 473 8.7E-18 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.10.275.10 14 152 3.9E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 SUPERFAMILY SSF48557 14 467 6.77E-145 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 22-04-2016 IPR000362 Fumarate lyase family VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 22-04-2016 IPR000362 Fumarate lyase family VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 22-04-2016 IPR000362 Fumarate lyase family VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 22-04-2016 IPR000362 Fumarate lyase family VP2863 2440d6b700577b954c5d2a003e4bbe0b 483 PANTHER PTHR11444 3 482 2.1E-293 T 22-04-2016 IPR000362 Fumarate lyase family VP2763 1bc87ca6c4a30ad60ce926540d347c8e 300 Gene3D G3DSA:3.20.20.220 20 295 7.8E-106 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like VP2763 1bc87ca6c4a30ad60ce926540d347c8e 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 1.8E-100 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VP2763 1bc87ca6c4a30ad60ce926540d347c8e 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 8.1E-103 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VP2763 1bc87ca6c4a30ad60ce926540d347c8e 300 SUPERFAMILY SSF51730 22 294 2.16E-95 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like VP2763 1bc87ca6c4a30ad60ce926540d347c8e 300 PANTHER PTHR21091 149 280 3.1E-42 T 22-04-2016 VP2089 b77996b6fe3ac94dc72ceda7c02148fe 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 5.1E-15 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VP2089 b77996b6fe3ac94dc72ceda7c02148fe 300 PANTHER PTHR30465 17 300 2.1E-142 T 22-04-2016 VP2089 b77996b6fe3ac94dc72ceda7c02148fe 300 SUPERFAMILY SSF161098 97 281 1.44E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2089 b77996b6fe3ac94dc72ceda7c02148fe 300 PANTHER PTHR30465:SF9 17 300 2.1E-142 T 22-04-2016 VP2089 b77996b6fe3ac94dc72ceda7c02148fe 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.1E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2089 b77996b6fe3ac94dc72ceda7c02148fe 300 Gene3D G3DSA:1.10.3720.10 100 297 5.4E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP3070 027b772f8cbf20af5184b09b9cba7602 288 Pfam PF00231 ATP synthase 5 287 7.2E-93 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3070 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:3.40.1380.10 64 191 9.6E-45 T 22-04-2016 VP3070 027b772f8cbf20af5184b09b9cba7602 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.835 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3070 027b772f8cbf20af5184b09b9cba7602 288 PANTHER PTHR11693 1 288 1.5E-130 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3070 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:1.10.287.80 237 283 6.1E-30 T 22-04-2016 VP3070 027b772f8cbf20af5184b09b9cba7602 288 SUPERFAMILY SSF52943 2 288 3.14E-96 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain VP3070 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 8.2E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3070 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 8.2E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3070 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 8.2E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3070 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 8.2E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3070 027b772f8cbf20af5184b09b9cba7602 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site VP3070 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:1.10.287.80 19 60 1.5E-39 T 22-04-2016 VP3070 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:1.10.287.80 203 236 1.5E-39 T 22-04-2016 VP3070 027b772f8cbf20af5184b09b9cba7602 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.2E-111 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 Gene3D G3DSA:3.40.50.20 3 118 3.1E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP1297 e36babc44497cf49014fbb5d997d5e4e 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 9.0E-191 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 Gene3D G3DSA:3.30.1490.20 121 196 1.7E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 Gene3D G3DSA:3.30.470.20 197 387 2.3E-70 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 PANTHER PTHR11609 1 381 3.5E-218 T 22-04-2016 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 SUPERFAMILY SSF51246 317 389 5.18E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif VP1297 e36babc44497cf49014fbb5d997d5e4e 391 Pfam PF02222 ATP-grasp domain 121 293 2.8E-58 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 SUPERFAMILY SSF56059 111 313 7.95E-58 T 22-04-2016 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 PANTHER PTHR11609:SF7 1 381 3.5E-218 T 22-04-2016 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 51.9 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VP1297 e36babc44497cf49014fbb5d997d5e4e 391 SUPERFAMILY SSF52440 2 110 1.14E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP0005 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0005 d979041072884e9e71b07b5e6728e1a6 44 PANTHER PTHR14503 1 43 1.1E-21 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0005 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.8E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0005 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0005 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0005 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2747 37537d54c1ef41e8873f523245d5fbdb 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 1.6E-41 T 22-04-2016 IPR007446 Pilus assembly protein PilP VP2747 37537d54c1ef41e8873f523245d5fbdb 171 PIRSF PIRSF016481 1 171 2.1E-52 T 22-04-2016 IPR007446 Pilus assembly protein PilP VP1921 5052916b11808dee662ab9d7085d44be 198 SUPERFAMILY SSF142695 19 172 6.8E-56 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VP1921 5052916b11808dee662ab9d7085d44be 198 PANTHER PTHR21327 21 198 1.3E-75 T 22-04-2016 VP1921 5052916b11808dee662ab9d7085d44be 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 23 194 1.5E-62 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VP1921 5052916b11808dee662ab9d7085d44be 198 PANTHER PTHR21327:SF6 21 198 1.3E-75 T 22-04-2016 VP1921 5052916b11808dee662ab9d7085d44be 198 Pfam PF00925 GTP cyclohydrolase II 19 171 4.7E-60 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VP1921 5052916b11808dee662ab9d7085d44be 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 38.928 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VP2391 32cfbb8de7c7451ee7ac38af3a419961 183 Gene3D G3DSA:3.10.490.10 1 146 9.7E-10 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VP2391 32cfbb8de7c7451ee7ac38af3a419961 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 8.3E-9 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VP2391 32cfbb8de7c7451ee7ac38af3a419961 183 SUPERFAMILY SSF110857 1 124 9.42E-17 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VP1003 0020405b5b9927b363b676ce4a81f52d 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VP1003 0020405b5b9927b363b676ce4a81f52d 268 PANTHER PTHR22748 1 268 1.1E-134 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VP1003 0020405b5b9927b363b676ce4a81f52d 268 SUPERFAMILY SSF56219 1 268 3.8E-86 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP1003 0020405b5b9927b363b676ce4a81f52d 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.6E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP1003 0020405b5b9927b363b676ce4a81f52d 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.0E-100 T 22-04-2016 VP1003 0020405b5b9927b363b676ce4a81f52d 268 Gene3D G3DSA:3.60.10.10 1 267 2.4E-84 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP1003 0020405b5b9927b363b676ce4a81f52d 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 2.8E-87 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VP1003 0020405b5b9927b363b676ce4a81f52d 268 PANTHER PTHR22748:SF7 1 268 1.1E-134 T 22-04-2016 VP1003 0020405b5b9927b363b676ce4a81f52d 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 Gene3D G3DSA:3.40.50.300 61 279 8.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2429 c0b05929f5d38700ef3c4aff5498310b 459 SMART SM00382 93 246 5.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2429 c0b05929f5d38700ef3c4aff5498310b 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.6E-9 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF52540 70 294 2.66E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2429 c0b05929f5d38700ef3c4aff5498310b 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.2E-225 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 PANTHER PTHR32472 1 455 1.6E-225 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 Pfam PF13481 AAA domain 73 224 1.8E-13 T 22-04-2016 VP2429 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF54211 305 456 4.17E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP2429 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF54211 257 271 4.17E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP2429 c0b05929f5d38700ef3c4aff5498310b 459 Gene3D G3DSA:3.30.230.10 286 456 1.7E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 SUPERFAMILY SSF52922 492 619 4.19E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 SUPERFAMILY SSF52518 317 504 9.92E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.6E-119 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 Gene3D G3DSA:3.40.50.970 335 495 1.1E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 PANTHER PTHR11624 241 621 0.0 T 22-04-2016 IPR033247 Transketolase family VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 1.2E-302 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 SUPERFAMILY SSF52518 243 381 5.61E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.952 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 9.5E-37 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 SUPERFAMILY SSF52518 9 199 5.61E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 SMART SM00861 319 483 2.0E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.3E-28 T 22-04-2016 IPR033248 Transketolase, C-terminal domain VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 PANTHER PTHR11624:SF20 241 621 0.0 T 22-04-2016 VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 Gene3D G3DSA:3.40.50.970 242 334 6.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 Gene3D G3DSA:3.40.50.970 26 201 6.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0686 c1dfefcdd6e3031ef3ad5f8e9c38966e 621 Gene3D G3DSA:3.40.50.920 496 619 6.0E-38 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VP1944 cde564c9156d4942874cb061b05507ef 610 SUPERFAMILY SSF82771 16 100 4.58E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VP1944 cde564c9156d4942874cb061b05507ef 610 Gene3D G3DSA:4.10.860.10 183 243 1.1E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 VP1944 cde564c9156d4942874cb061b05507ef 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.64 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VP1944 cde564c9156d4942874cb061b05507ef 610 PANTHER PTHR30562:SF1 9 608 5.1E-283 T 22-04-2016 VP1944 cde564c9156d4942874cb061b05507ef 610 Gene3D G3DSA:1.10.150.20 555 609 5.9E-23 T 22-04-2016 VP1944 cde564c9156d4942874cb061b05507ef 610 SMART SM00278 588 607 300.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP1944 cde564c9156d4942874cb061b05507ef 610 SMART SM00278 556 575 0.24 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP1944 cde564c9156d4942874cb061b05507ef 610 Pfam PF02151 UvrB/uvrC motif 205 238 1.2E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 VP1944 cde564c9156d4942874cb061b05507ef 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 1.3E-9 T 22-04-2016 VP1944 cde564c9156d4942874cb061b05507ef 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.7E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VP1944 cde564c9156d4942874cb061b05507ef 610 SMART SM00465 17 98 4.2E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VP1944 cde564c9156d4942874cb061b05507ef 610 SUPERFAMILY SSF47781 521 609 3.5E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VP1944 cde564c9156d4942874cb061b05507ef 610 SUPERFAMILY SSF46600 190 243 3.4E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 VP1944 cde564c9156d4942874cb061b05507ef 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 4.6E-215 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VP1944 cde564c9156d4942874cb061b05507ef 610 PANTHER PTHR30562 9 608 5.1E-283 T 22-04-2016 VP1944 cde564c9156d4942874cb061b05507ef 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 9.1E-44 T 22-04-2016 IPR001162 UvrC family homology region VP1944 cde564c9156d4942874cb061b05507ef 610 Gene3D G3DSA:3.40.1440.10 17 97 2.0E-11 T 22-04-2016 IPR027299 GIY-YIG domain VP2781 1a234af2333b602a813c18f5edd791b5 313 PANTHER PTHR10188:SF24 5 313 2.5E-127 T 22-04-2016 VP2781 1a234af2333b602a813c18f5edd791b5 313 SUPERFAMILY SSF56235 5 307 2.65E-98 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP2781 1a234af2333b602a813c18f5edd791b5 313 PANTHER PTHR10188 5 313 2.5E-127 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VP2781 1a234af2333b602a813c18f5edd791b5 313 Pfam PF01112 Asparaginase 7 310 9.4E-110 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VP3048 0da6b30dcf65a334947481d2df5f2cec 218 Pfam PF03006 Haemolysin-III related 11 208 4.1E-39 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VP3048 0da6b30dcf65a334947481d2df5f2cec 218 PANTHER PTHR20855 9 218 1.3E-74 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VP3048 0da6b30dcf65a334947481d2df5f2cec 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 214 3.7E-69 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VP3048 0da6b30dcf65a334947481d2df5f2cec 218 PANTHER PTHR20855:SF3 9 218 1.3E-74 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VP1411 5f3b4ad9e15180497366b9c12ab5638c 504 SUPERFAMILY SSF49879 21 104 1.87E-23 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 VP1411 5f3b4ad9e15180497366b9c12ab5638c 504 SMART SM00240 29 80 5.1E-8 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VP1411 5f3b4ad9e15180497366b9c12ab5638c 504 Gene3D G3DSA:2.60.200.20 20 106 1.4E-21 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VP1411 5f3b4ad9e15180497366b9c12ab5638c 504 Pfam PF00498 FHA domain 31 97 1.7E-15 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 PANTHER PTHR11749 2 223 4.8E-141 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 SUPERFAMILY SSF51366 4 217 1.82E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 Gene3D G3DSA:3.20.20.70 2 220 7.9E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 PIRSF PIRSF001461 1 223 1.4E-106 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.6E-92 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.0E-99 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VP2741 03b9b46c30c0597ec32d46d1323c7526 223 PANTHER PTHR11749:SF7 2 223 4.8E-141 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.40.50.620 215 391 6.8E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0617 851240ac9047ed97ea04266804cf1d95 517 PANTHER PTHR11922 3 514 2.7E-297 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.5E-156 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VP0617 851240ac9047ed97ea04266804cf1d95 517 PANTHER PTHR11922:SF2 3 514 2.7E-297 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.511 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VP0617 851240ac9047ed97ea04266804cf1d95 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.1E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VP0617 851240ac9047ed97ea04266804cf1d95 517 Pfam PF02540 NAD synthase 212 285 1.2E-7 T 22-04-2016 IPR022310 NAD/GMP synthase VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.30.300.10 393 517 3.5E-53 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.40.50.880 4 214 4.2E-64 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP0617 851240ac9047ed97ea04266804cf1d95 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.8E-84 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VP0617 851240ac9047ed97ea04266804cf1d95 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 7.2E-43 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VP0617 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF54810 397 517 6.93E-51 T 22-04-2016 VP0617 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF52317 5 196 1.19E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP0617 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF52402 189 412 4.85E-58 T 22-04-2016 VP0903 31098b9e70f8a000771951d004ff9fe9 411 SMART SM00487 20 221 6.2E-59 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP0903 31098b9e70f8a000771951d004ff9fe9 411 PANTHER PTHR24031 1 399 1.5E-250 T 22-04-2016 VP0903 31098b9e70f8a000771951d004ff9fe9 411 PANTHER PTHR24031:SF273 1 399 1.5E-250 T 22-04-2016 VP0903 31098b9e70f8a000771951d004ff9fe9 411 Pfam PF00271 Helicase conserved C-terminal domain 233 338 2.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal VP0903 31098b9e70f8a000771951d004ff9fe9 411 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VP0903 31098b9e70f8a000771951d004ff9fe9 411 Gene3D G3DSA:3.40.50.300 218 372 4.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0903 31098b9e70f8a000771951d004ff9fe9 411 Gene3D G3DSA:3.40.50.300 2 217 4.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0903 31098b9e70f8a000771951d004ff9fe9 411 SMART SM00490 257 338 1.4E-30 T 22-04-2016 IPR001650 Helicase, C-terminal VP0903 31098b9e70f8a000771951d004ff9fe9 411 Pfam PF00270 DEAD/DEAH box helicase 25 194 3.9E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP0903 31098b9e70f8a000771951d004ff9fe9 411 SUPERFAMILY SSF52540 74 359 6.56E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1069 18b0697d451602d46869eeed5a509771 806 SMART SM00387 464 579 2.0E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1069 18b0697d451602d46869eeed5a509771 806 SMART SM00448 598 712 1.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1069 18b0697d451602d46869eeed5a509771 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 6.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1069 18b0697d451602d46869eeed5a509771 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 575 4.6E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1069 18b0697d451602d46869eeed5a509771 806 Pfam PF02743 Cache domain 44 228 7.0E-12 T 22-04-2016 IPR033479 Double Cache domain 1 VP1069 18b0697d451602d46869eeed5a509771 806 SUPERFAMILY SSF52172 596 729 9.11E-28 T 22-04-2016 IPR011006 CheY-like superfamily VP1069 18b0697d451602d46869eeed5a509771 806 SUPERFAMILY SSF47384 338 418 4.51E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1069 18b0697d451602d46869eeed5a509771 806 Gene3D G3DSA:3.30.450.20 127 197 2.9E-12 T 22-04-2016 VP1069 18b0697d451602d46869eeed5a509771 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1069 18b0697d451602d46869eeed5a509771 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1069 18b0697d451602d46869eeed5a509771 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1069 18b0697d451602d46869eeed5a509771 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1069 18b0697d451602d46869eeed5a509771 806 Pfam PF00072 Response regulator receiver domain 601 712 9.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1069 18b0697d451602d46869eeed5a509771 806 PANTHER PTHR24423 36 52 5.0E-123 T 22-04-2016 VP1069 18b0697d451602d46869eeed5a509771 806 PANTHER PTHR24423 287 759 5.0E-123 T 22-04-2016 VP1069 18b0697d451602d46869eeed5a509771 806 SUPERFAMILY SSF55874 406 575 1.07E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1069 18b0697d451602d46869eeed5a509771 806 Gene3D G3DSA:3.30.565.10 404 577 1.2E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1069 18b0697d451602d46869eeed5a509771 806 Gene3D G3DSA:3.40.50.2300 596 715 1.2E-30 T 22-04-2016 VP1069 18b0697d451602d46869eeed5a509771 806 SMART SM00388 352 417 8.2E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1069 18b0697d451602d46869eeed5a509771 806 Gene3D G3DSA:1.10.287.130 346 403 2.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 1.4E-79 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 SUPERFAMILY SSF50692 669 817 2.49E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 7.1E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 SUPERFAMILY SSF53706 42 660 1.1E-167 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 PANTHER PTHR11615 328 432 0.0 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 PANTHER PTHR11615 50 306 0.0 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 PANTHER PTHR11615 448 820 0.0 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.90.55.10 505 608 2.7E-33 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.40.50.740 81 181 1.0E-49 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.40.50.740 394 504 1.0E-49 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.40.228.10 186 393 1.0E-57 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 22-04-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 PANTHER PTHR11615:SF133 328 432 0.0 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 PANTHER PTHR11615:SF133 50 306 0.0 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 PANTHER PTHR11615:SF133 448 820 0.0 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:2.40.40.20 649 812 1.5E-55 T 22-04-2016 VP1162 c98951fd5a58d2478d0e5c3d5583b1dd 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VP2562 9112685dc6fdcceead3f82a419a65655 546 PANTHER PTHR11550 1 536 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VP2562 9112685dc6fdcceead3f82a419a65655 546 Gene3D G3DSA:3.40.50.300 1 280 1.1E-132 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2562 9112685dc6fdcceead3f82a419a65655 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.0E-124 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VP2562 9112685dc6fdcceead3f82a419a65655 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.1E-62 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VP2562 9112685dc6fdcceead3f82a419a65655 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.318 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VP2562 9112685dc6fdcceead3f82a419a65655 546 SUPERFAMILY SSF52317 289 539 2.75E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP2562 9112685dc6fdcceead3f82a419a65655 546 SUPERFAMILY SSF52540 3 269 2.13E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2562 9112685dc6fdcceead3f82a419a65655 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 6.6E-260 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VP2562 9112685dc6fdcceead3f82a419a65655 546 Gene3D G3DSA:3.40.50.880 288 539 2.0E-98 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP2656 5ac54a5a25634668ef0ba7ba95ce8563 129 PANTHER PTHR11803 1 128 2.5E-52 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VP2656 5ac54a5a25634668ef0ba7ba95ce8563 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.2E-53 T 22-04-2016 IPR006056 RidA family VP2656 5ac54a5a25634668ef0ba7ba95ce8563 129 Gene3D G3DSA:3.30.1330.40 5 128 4.5E-47 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VP2656 5ac54a5a25634668ef0ba7ba95ce8563 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 22-04-2016 IPR019897 RidA, conserved site VP2656 5ac54a5a25634668ef0ba7ba95ce8563 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.6E-45 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VP2656 5ac54a5a25634668ef0ba7ba95ce8563 129 SUPERFAMILY SSF55298 2 128 3.46E-44 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VP2893 66b4182cdf14d075a26dff007a4b2fa6 522 SUPERFAMILY SSF48452 338 485 3.25E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2893 66b4182cdf14d075a26dff007a4b2fa6 522 Gene3D G3DSA:1.25.40.10 340 485 2.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2893 66b4182cdf14d075a26dff007a4b2fa6 522 PANTHER PTHR26402:SF557 7 103 2.2E-17 T 22-04-2016 VP2893 66b4182cdf14d075a26dff007a4b2fa6 522 SUPERFAMILY SSF46894 6 103 8.79E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP2893 66b4182cdf14d075a26dff007a4b2fa6 522 Gene3D G3DSA:1.10.10.10 7 103 7.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2893 66b4182cdf14d075a26dff007a4b2fa6 522 PANTHER PTHR26402 7 103 2.2E-17 T 22-04-2016 VP2893 66b4182cdf14d075a26dff007a4b2fa6 522 SMART SM00862 24 100 1.8E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP2893 66b4182cdf14d075a26dff007a4b2fa6 522 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 4.2E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP1333 5f4ab016382b70f28fc9ed6399b736ef 324 PANTHER PTHR13812 1 315 8.0E-77 T 22-04-2016 VP1333 5f4ab016382b70f28fc9ed6399b736ef 324 Gene3D G3DSA:3.40.50.720 133 302 2.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1333 5f4ab016382b70f28fc9ed6399b736ef 324 Gene3D G3DSA:3.30.1780.10 1 132 4.5E-36 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal VP1333 5f4ab016382b70f28fc9ed6399b736ef 324 PIRSF PIRSF001439 1 322 2.1E-65 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin VP1333 5f4ab016382b70f28fc9ed6399b736ef 324 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 314 2.8E-54 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin VP1333 5f4ab016382b70f28fc9ed6399b736ef 324 PANTHER PTHR13812:SF19 1 315 8.0E-77 T 22-04-2016 VP1333 5f4ab016382b70f28fc9ed6399b736ef 324 SUPERFAMILY SSF51735 1 315 9.67E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0364 f27d6d7bc537d4e594026f6becd484fb 352 PANTHER PTHR28629 1 241 1.2E-154 T 22-04-2016 VP0364 f27d6d7bc537d4e594026f6becd484fb 352 PANTHER PTHR28629 259 352 1.2E-154 T 22-04-2016 VP0364 f27d6d7bc537d4e594026f6becd484fb 352 PANTHER PTHR28629:SF2 1 241 1.2E-154 T 22-04-2016 VP0364 f27d6d7bc537d4e594026f6becd484fb 352 PANTHER PTHR28629:SF2 259 352 1.2E-154 T 22-04-2016 VP0364 f27d6d7bc537d4e594026f6becd484fb 352 Gene3D G3DSA:3.30.1180.20 182 352 3.8E-63 T 22-04-2016 VP0364 f27d6d7bc537d4e594026f6becd484fb 352 Gene3D G3DSA:3.40.50.10440 11 180 5.0E-66 T 22-04-2016 VP0364 f27d6d7bc537d4e594026f6becd484fb 352 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 349 7.7E-142 T 22-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 VP0364 f27d6d7bc537d4e594026f6becd484fb 352 Pfam PF02733 Dak1 domain 17 348 2.9E-124 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 VP0364 f27d6d7bc537d4e594026f6becd484fb 352 SUPERFAMILY SSF82549 10 352 5.23E-124 T 22-04-2016 VP3008 0266619e4c338118f0c420af1a178bbd 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 4.7E-87 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 VP3008 0266619e4c338118f0c420af1a178bbd 304 PANTHER PTHR22911:SF41 4 302 6.5E-151 T 22-04-2016 VP3008 0266619e4c338118f0c420af1a178bbd 304 Pfam PF00892 EamA-like transporter family 12 145 1.6E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VP3008 0266619e4c338118f0c420af1a178bbd 304 PANTHER PTHR22911 4 302 6.5E-151 T 22-04-2016 VP3008 0266619e4c338118f0c420af1a178bbd 304 SUPERFAMILY SSF103481 50 146 6.93E-14 T 22-04-2016 VP3008 0266619e4c338118f0c420af1a178bbd 304 SUPERFAMILY SSF103481 190 291 4.05E-9 T 22-04-2016 VP0982 49a49ecc11159260efe31d6ea8b768eb 582 Gene3D G3DSA:3.40.50.300 342 574 7.5E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0982 49a49ecc11159260efe31d6ea8b768eb 582 Pfam PF00005 ABC transporter 359 509 1.7E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0982 49a49ecc11159260efe31d6ea8b768eb 582 PANTHER PTHR24221 6 582 0.0 T 22-04-2016 VP0982 49a49ecc11159260efe31d6ea8b768eb 582 SUPERFAMILY SSF90123 14 327 8.11E-76 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP0982 49a49ecc11159260efe31d6ea8b768eb 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 1.6E-240 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VP0982 49a49ecc11159260efe31d6ea8b768eb 582 Gene3D G3DSA:1.20.1560.10 13 327 2.2E-75 T 22-04-2016 VP0982 49a49ecc11159260efe31d6ea8b768eb 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0982 49a49ecc11159260efe31d6ea8b768eb 582 SUPERFAMILY SSF52540 331 580 3.38E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0982 49a49ecc11159260efe31d6ea8b768eb 582 SMART SM00382 368 555 4.2E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0982 49a49ecc11159260efe31d6ea8b768eb 582 Pfam PF00664 ABC transporter transmembrane region 27 293 1.3E-56 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP0982 49a49ecc11159260efe31d6ea8b768eb 582 PANTHER PTHR24221:SF188 6 582 0.0 T 22-04-2016 VP2034 10a7b8e335c552f73a67dd9aa0f57c58 230 PANTHER PTHR35369 30 159 8.0E-14 T 22-04-2016 VP2034 10a7b8e335c552f73a67dd9aa0f57c58 230 Gene3D G3DSA:3.40.50.300 48 159 2.0E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2034 10a7b8e335c552f73a67dd9aa0f57c58 230 SUPERFAMILY SSF52540 49 159 1.17E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2034 10a7b8e335c552f73a67dd9aa0f57c58 230 PANTHER PTHR35369:SF1 30 159 8.0E-14 T 22-04-2016 VP2034 10a7b8e335c552f73a67dd9aa0f57c58 230 Pfam PF00154 recA bacterial DNA recombination protein 29 125 1.3E-5 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2034 10a7b8e335c552f73a67dd9aa0f57c58 230 PIRSF PIRSF037290 1 230 2.1E-79 T 22-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.1140.32 108 207 2.2E-46 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 SMART SM00322 60 125 7.7E-8 T 22-04-2016 IPR004087 K Homology domain GO:0003676 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.5E-97 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.529 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.3E-40 T 22-04-2016 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 PANTHER PTHR11760 2 231 6.7E-143 T 22-04-2016 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.300.20 18 107 2.0E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF07650 KH domain 38 111 1.3E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 PANTHER PTHR11760:SF19 2 231 6.7E-143 T 22-04-2016 VP0263 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 SUPERFAMILY SSF52151 190 305 9.94E-83 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 SUPERFAMILY SSF52151 4 122 9.94E-83 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 PIRSF PIRSF000446 1 307 1.0E-136 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 Gene3D G3DSA:3.40.366.10 2 122 5.9E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 Gene3D G3DSA:3.40.366.10 197 302 5.9E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 Pfam PF00698 Acyl transferase domain 7 291 3.0E-39 T 22-04-2016 IPR014043 Acyl transferase VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 Gene3D G3DSA:3.30.70.250 125 196 3.0E-32 T 22-04-2016 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 SUPERFAMILY SSF55048 128 197 1.18E-18 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 PANTHER PTHR10982 1 306 6.2E-168 T 22-04-2016 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 9.3E-127 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VP2055 4a98429ef2323a2c50fa6da7d8b7f33c 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.5E-44 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain VP0827 7f94133e0b76ab1f18e224a2ebf2a690 529 Pfam PF02254 TrkA-N domain 388 504 5.9E-19 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VP0827 7f94133e0b76ab1f18e224a2ebf2a690 529 PANTHER PTHR16254:SF14 3 528 4.8E-156 T 22-04-2016 VP0827 7f94133e0b76ab1f18e224a2ebf2a690 529 SUPERFAMILY SSF51735 387 517 3.38E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0827 7f94133e0b76ab1f18e224a2ebf2a690 529 Gene3D G3DSA:3.40.50.720 380 528 5.5E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0827 7f94133e0b76ab1f18e224a2ebf2a690 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 1.1E-40 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VP0827 7f94133e0b76ab1f18e224a2ebf2a690 529 PANTHER PTHR16254 3 528 4.8E-156 T 22-04-2016 VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 SMART SM00487 17 310 0.0027 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 SUPERFAMILY SSF52540 14 236 6.3E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 PANTHER PTHR11472 14 624 3.7E-225 T 22-04-2016 VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 Gene3D G3DSA:3.40.50.300 454 602 1.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 SUPERFAMILY SSF52540 480 545 2.66E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 Pfam PF13307 Helicase C-terminal domain 462 619 4.0E-34 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 2.2E-5 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 SMART SM00491 477 606 2.0E-45 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 Gene3D G3DSA:3.40.50.300 193 237 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 Gene3D G3DSA:3.40.50.300 14 117 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 PANTHER PTHR11472:SF37 14 624 3.7E-225 T 22-04-2016 VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 SUPERFAMILY SSF52540 42 89 2.66E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0865 b1ef87a0619b1bc5cb41d0d056ee0bb3 636 SUPERFAMILY SSF52540 576 601 2.66E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 PANTHER PTHR24031:SF249 626 667 1.6E-129 T 22-04-2016 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 PANTHER PTHR24031:SF249 299 603 1.6E-129 T 22-04-2016 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 PANTHER PTHR24031:SF249 259 282 1.6E-129 T 22-04-2016 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.0E-18 T 22-04-2016 IPR001650 Helicase, C-terminal VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 SUPERFAMILY SSF52540 508 653 4.42E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 SUPERFAMILY SSF52540 292 342 4.42E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 SMART SM00487 265 459 1.7E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 SUPERFAMILY SSF50249 9 174 3.08E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 7.1E-239 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 6.5E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 Gene3D G3DSA:2.40.50.140 47 142 1.3E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 SUPERFAMILY SSF52540 200 453 1.19E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 Gene3D G3DSA:3.40.50.300 454 638 3.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 Gene3D G3DSA:3.40.50.300 256 453 2.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 PANTHER PTHR24031 626 667 1.6E-129 T 22-04-2016 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 PANTHER PTHR24031 299 603 1.6E-129 T 22-04-2016 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 PANTHER PTHR24031 259 282 1.6E-129 T 22-04-2016 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 SMART SM00490 505 589 1.7E-21 T 22-04-2016 IPR001650 Helicase, C-terminal VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 Gene3D G3DSA:1.10.150.20 4 37 2.3E-5 T 22-04-2016 VP0157 aace8b5cc4bc9e2ab583ad3d68f9f1d7 693 Pfam PF17191 RecG wedge domain 14 172 2.8E-21 T 22-04-2016 IPR033454 RecG, wedge domain VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 Gene3D G3DSA:3.30.70.940 1 99 4.9E-21 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 SUPERFAMILY SSF50104 115 163 6.22E-6 T 22-04-2016 IPR008991 Translation protein SH3-like domain VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 Gene3D G3DSA:2.30.30.30 115 161 3.0E-6 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 Pfam PF02357 Transcription termination factor nusG 2 94 3.2E-20 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 1.2E-62 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.907 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 SMART SM00738 1 101 1.5E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 SUPERFAMILY SSF82679 1 101 3.92E-29 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 PANTHER PTHR30265:SF3 1 162 8.1E-46 T 22-04-2016 VP0825 7d0d1d5b687414fd5ddc4abb98955b0a 166 PANTHER PTHR30265 1 162 8.1E-46 T 22-04-2016 VP1024 ef60f0e1cf2166381da4658cd3478c8d 485 Pfam PF00534 Glycosyl transferases group 1 298 445 2.0E-15 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VP1024 ef60f0e1cf2166381da4658cd3478c8d 485 PANTHER PTHR12526 7 485 7.4E-118 T 22-04-2016 VP1024 ef60f0e1cf2166381da4658cd3478c8d 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 1.6E-168 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VP1024 ef60f0e1cf2166381da4658cd3478c8d 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.269 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VP1024 ef60f0e1cf2166381da4658cd3478c8d 485 Gene3D G3DSA:3.40.50.2000 256 464 3.3E-65 T 22-04-2016 VP1024 ef60f0e1cf2166381da4658cd3478c8d 485 Pfam PF08323 Starch synthase catalytic domain 8 239 1.6E-66 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VP1024 ef60f0e1cf2166381da4658cd3478c8d 485 SUPERFAMILY SSF53756 4 485 7.22E-109 T 22-04-2016 VP1024 ef60f0e1cf2166381da4658cd3478c8d 485 PANTHER PTHR12526:SF17 7 485 7.4E-118 T 22-04-2016 VP2590 adac311cb78ac87d8abc2de1e4a3ee5a 102 SUPERFAMILY SSF102829 6 95 3.01E-24 T 22-04-2016 IPR007838 Cell division protein ZapA-like VP2590 adac311cb78ac87d8abc2de1e4a3ee5a 102 Pfam PF05164 Cell division protein ZapA 6 89 7.0E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like VP2590 adac311cb78ac87d8abc2de1e4a3ee5a 102 PANTHER PTHR34981 2 94 3.6E-23 T 22-04-2016 VP2590 adac311cb78ac87d8abc2de1e4a3ee5a 102 PANTHER PTHR34981:SF1 2 94 3.6E-23 T 22-04-2016 VP1648 e06a91b849ae6652ca2068a2b73617c1 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 259 4.2E-46 T 22-04-2016 VP1648 e06a91b849ae6652ca2068a2b73617c1 298 PANTHER PTHR21631 3 296 1.9E-158 T 22-04-2016 VP1648 e06a91b849ae6652ca2068a2b73617c1 298 SUPERFAMILY SSF51621 5 294 1.44E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP1648 e06a91b849ae6652ca2068a2b73617c1 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 6.7E-127 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VP1648 e06a91b849ae6652ca2068a2b73617c1 298 Gene3D G3DSA:3.20.20.60 6 291 3.0E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP1648 e06a91b849ae6652ca2068a2b73617c1 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.521 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VP1648 e06a91b849ae6652ca2068a2b73617c1 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VP1648 e06a91b849ae6652ca2068a2b73617c1 298 PANTHER PTHR21631:SF4 3 296 1.9E-158 T 22-04-2016 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.10.20.30 402 463 6.3E-24 T 22-04-2016 IPR012675 Beta-grasp domain VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 PANTHER PTHR21262 54 739 0.0 T 22-04-2016 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.30.70.260 662 736 4.9E-17 T 22-04-2016 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.30.460.10 193 339 4.2E-49 T 22-04-2016 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF02824 TGS domain 402 461 8.6E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF13328 HD domain 52 190 1.8E-35 T 22-04-2016 IPR003607 HD/PDEase domain VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.8E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF81301 195 406 2.45E-62 T 22-04-2016 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 2.9E-182 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF81271 395 461 9.81E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF55021 662 737 3.57E-10 T 22-04-2016 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF13291 ACT domain 661 737 1.9E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF109604 50 205 5.96E-42 T 22-04-2016 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 PANTHER PTHR21262:SF5 54 739 0.0 T 22-04-2016 VP2564 2ed4f879c3d44cf7b5efce869c7cbc62 739 SMART SM00954 250 360 8.3E-64 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VP1374 38d5eaa13c4f887ba8d9f9e688cfd4d8 491 Pfam PF00939 Sodium:sulfate symporter transmembrane region 24 480 1.5E-51 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1374 38d5eaa13c4f887ba8d9f9e688cfd4d8 491 PIRSF PIRSF002457 6 491 1.2E-125 T 22-04-2016 IPR030676 Citrate carrier CitT-related VP1374 38d5eaa13c4f887ba8d9f9e688cfd4d8 491 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 54 481 1.4E-79 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1374 38d5eaa13c4f887ba8d9f9e688cfd4d8 491 PANTHER PTHR10283 14 88 4.5E-139 T 22-04-2016 VP1374 38d5eaa13c4f887ba8d9f9e688cfd4d8 491 PANTHER PTHR10283 108 487 4.5E-139 T 22-04-2016 VP1374 38d5eaa13c4f887ba8d9f9e688cfd4d8 491 PANTHER PTHR10283:SF92 14 88 4.5E-139 T 22-04-2016 VP1374 38d5eaa13c4f887ba8d9f9e688cfd4d8 491 PANTHER PTHR10283:SF92 108 487 4.5E-139 T 22-04-2016 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 Gene3D G3DSA:3.90.190.20 301 431 6.7E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 Gene3D G3DSA:3.40.50.720 9 95 4.4E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0458 5f9d5da0c9dec88daac64b7546659e84 437 PANTHER PTHR23135 1 437 4.6E-152 T 22-04-2016 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.197 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 434 4.0E-133 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 PANTHER PTHR23135:SF2 1 437 4.6E-152 T 22-04-2016 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 Pfam PF08245 Mur ligase middle domain 113 279 2.8E-31 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 SUPERFAMILY SSF51984 9 97 1.02E-17 T 22-04-2016 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 353 9.4E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 Gene3D G3DSA:3.40.1190.10 97 299 1.8E-64 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 SUPERFAMILY SSF53623 98 297 4.71E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0458 5f9d5da0c9dec88daac64b7546659e84 437 SUPERFAMILY SSF53244 299 435 3.3E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 Gene3D G3DSA:2.40.30.20 11 103 5.2E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 PANTHER PTHR15184:SF3 8 506 2.8E-292 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 385 8.4E-72 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 Gene3D G3DSA:3.40.50.300 104 392 7.0E-112 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 376 385 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 SUPERFAMILY SSF50615 20 104 5.3E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 38 102 7.0E-14 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 SUPERFAMILY SSF47917 393 521 8.89E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 PANTHER PTHR15184 8 506 2.8E-292 T 22-04-2016 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 392 517 1.5E-44 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 11 522 49.733 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 SUPERFAMILY SSF52540 106 391 7.64E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 12 522 2.5E-251 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3071 9de0cdafaca5cc3e92e9703805c715bf 523 Gene3D G3DSA:1.20.150.20 393 520 1.5E-47 T 22-04-2016 VP0937 c2672debd709912bcd12fc8609340a88 624 SMART SM00563 456 570 3.0E-36 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP0937 c2672debd709912bcd12fc8609340a88 624 Pfam PF07690 Major Facilitator Superfamily 43 312 4.0E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP0937 c2672debd709912bcd12fc8609340a88 624 Gene3D G3DSA:3.40.1130.10 445 568 4.8E-15 T 22-04-2016 VP0937 c2672debd709912bcd12fc8609340a88 624 SUPERFAMILY SSF103473 13 424 6.41E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP0937 c2672debd709912bcd12fc8609340a88 624 PANTHER PTHR10434 345 620 1.5E-148 T 22-04-2016 VP0937 c2672debd709912bcd12fc8609340a88 624 Pfam PF01553 Acyltransferase 442 567 4.1E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP0937 c2672debd709912bcd12fc8609340a88 624 PANTHER PTHR10434:SF15 345 620 1.5E-148 T 22-04-2016 VP0937 c2672debd709912bcd12fc8609340a88 624 SUPERFAMILY SSF69593 405 609 1.57E-30 T 22-04-2016 VP0937 c2672debd709912bcd12fc8609340a88 624 Gene3D G3DSA:1.20.1250.20 16 198 2.0E-5 T 22-04-2016 VP0937 c2672debd709912bcd12fc8609340a88 624 Gene3D G3DSA:1.20.1250.20 227 420 1.6E-10 T 22-04-2016 VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 Gene3D G3DSA:3.40.190.10 80 190 6.0E-12 T 22-04-2016 VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 Gene3D G3DSA:1.10.10.10 1 79 1.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 PANTHER PTHR30126:SF29 1 242 2.5E-70 T 22-04-2016 VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 SUPERFAMILY SSF46785 3 84 1.81E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 SUPERFAMILY SSF53850 92 292 2.17E-26 T 22-04-2016 VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 Gene3D G3DSA:3.40.190.10 191 243 1.2E-4 T 22-04-2016 VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 PANTHER PTHR30126 1 242 2.5E-70 T 22-04-2016 VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.9E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1154 9738fc7bcfd88aa16bdaaac2e3568359 294 Pfam PF03466 LysR substrate binding domain 91 247 9.5E-21 T 22-04-2016 IPR005119 LysR, substrate-binding VP2268 d70fa0e9d52c578a6bffb8a8568c120b 116 Gene3D G3DSA:3.40.30.10 2 115 9.4E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2268 d70fa0e9d52c578a6bffb8a8568c120b 116 Pfam PF03960 ArsC family 6 112 5.1E-19 T 22-04-2016 IPR006660 Arsenate reductase-like VP2268 d70fa0e9d52c578a6bffb8a8568c120b 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 1.6E-31 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR VP2268 d70fa0e9d52c578a6bffb8a8568c120b 116 PANTHER PTHR30041:SF3 1 115 1.3E-46 T 22-04-2016 VP2268 d70fa0e9d52c578a6bffb8a8568c120b 116 PANTHER PTHR30041 1 115 1.3E-46 T 22-04-2016 VP2268 d70fa0e9d52c578a6bffb8a8568c120b 116 SUPERFAMILY SSF52833 2 114 1.34E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2355 71e635ca4241f4deadb5210979b0ad8e 181 PANTHER PTHR11071 23 180 1.0E-58 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VP2355 71e635ca4241f4deadb5210979b0ad8e 181 Gene3D G3DSA:2.40.100.10 20 180 6.6E-49 T 22-04-2016 IPR029000 Cyclophilin-like domain VP2355 71e635ca4241f4deadb5210979b0ad8e 181 SUPERFAMILY SSF50891 18 180 9.64E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain VP2355 71e635ca4241f4deadb5210979b0ad8e 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VP2355 71e635ca4241f4deadb5210979b0ad8e 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 1.7E-43 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VP2355 71e635ca4241f4deadb5210979b0ad8e 181 PIRSF PIRSF001467 5 181 2.4E-24 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VP2355 71e635ca4241f4deadb5210979b0ad8e 181 PANTHER PTHR11071:SF265 23 180 1.0E-58 T 22-04-2016 VP2355 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 9.2E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VP2355 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 9.2E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VP2355 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 9.2E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VP0870 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.30.300.30 456 552 2.8E-27 T 22-04-2016 VP0870 59ff60715d17d594c86dc19341dfc751 563 SUPERFAMILY SSF56801 13 553 4.06E-150 T 22-04-2016 VP0870 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.40.50.980 217 379 2.2E-42 T 22-04-2016 VP0870 59ff60715d17d594c86dc19341dfc751 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.3E-17 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VP0870 59ff60715d17d594c86dc19341dfc751 563 Pfam PF00501 AMP-binding enzyme 29 461 1.6E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP0870 59ff60715d17d594c86dc19341dfc751 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 22-04-2016 IPR020845 AMP-binding, conserved site VP0870 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:2.30.38.10 380 452 9.1E-30 T 22-04-2016 VP0870 59ff60715d17d594c86dc19341dfc751 563 PANTHER PTHR24096 11 153 1.5E-174 T 22-04-2016 VP0870 59ff60715d17d594c86dc19341dfc751 563 PANTHER PTHR24096 176 554 1.5E-174 T 22-04-2016 VP0870 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.40.50.980 185 216 1.1E-39 T 22-04-2016 VP0870 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.40.50.980 24 152 1.1E-39 T 22-04-2016 VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 Gene3D G3DSA:3.40.190.10 91 173 4.4E-8 T 22-04-2016 VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 Gene3D G3DSA:1.10.10.10 8 89 1.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 SUPERFAMILY SSF46785 8 90 2.27E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 Pfam PF03466 LysR substrate binding domain 90 295 9.7E-43 T 22-04-2016 IPR005119 LysR, substrate-binding VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 SUPERFAMILY SSF53850 90 299 8.32E-45 T 22-04-2016 VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 Gene3D G3DSA:3.40.190.10 174 263 1.6E-21 T 22-04-2016 VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 PANTHER PTHR30537 1 313 4.7E-181 T 22-04-2016 VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 PANTHER PTHR30537:SF14 1 313 4.7E-181 T 22-04-2016 VP0877 3c6397d3fcc69ddbd49ede59c4044777 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 3.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1675 81e091a347581c768face1c90903f92f 351 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 1.6E-114 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP1675 81e091a347581c768face1c90903f92f 351 PANTHER PTHR30531:SF3 1 349 9.5E-177 T 22-04-2016 VP1675 81e091a347581c768face1c90903f92f 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP1675 81e091a347581c768face1c90903f92f 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP1675 81e091a347581c768face1c90903f92f 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP1675 81e091a347581c768face1c90903f92f 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP1675 81e091a347581c768face1c90903f92f 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP1675 81e091a347581c768face1c90903f92f 351 SUPERFAMILY SSF160544 238 345 4.45E-33 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VP1675 81e091a347581c768face1c90903f92f 351 Gene3D G3DSA:3.40.1690.10 212 347 4.9E-53 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VP1675 81e091a347581c768face1c90903f92f 351 PANTHER PTHR30531 1 349 9.5E-177 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP1675 81e091a347581c768face1c90903f92f 351 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 1.4E-135 T 22-04-2016 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 VP1671 964b51581c494f6dd57ead04531b0d9f 328 Gene3D G3DSA:2.30.330.10 241 323 5.3E-23 T 22-04-2016 VP1671 964b51581c494f6dd57ead04531b0d9f 328 SUPERFAMILY SSF101801 167 226 1.96E-8 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VP1671 964b51581c494f6dd57ead04531b0d9f 328 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 320 1.4E-20 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VP1671 964b51581c494f6dd57ead04531b0d9f 328 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 46 320 2.3E-73 T 22-04-2016 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 VP1671 964b51581c494f6dd57ead04531b0d9f 328 PANTHER PTHR22617:SF34 69 326 4.8E-15 T 22-04-2016 VP1671 964b51581c494f6dd57ead04531b0d9f 328 SUPERFAMILY SSF101801 249 324 8.37E-20 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VP1671 964b51581c494f6dd57ead04531b0d9f 328 PANTHER PTHR22617 69 326 4.8E-15 T 22-04-2016 VP1671 964b51581c494f6dd57ead04531b0d9f 328 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 191 201 1.7E-7 T 22-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 VP1671 964b51581c494f6dd57ead04531b0d9f 328 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 253 265 1.7E-7 T 22-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 VP1671 964b51581c494f6dd57ead04531b0d9f 328 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 297 314 1.7E-7 T 22-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 VP0092 dc957864572386f4d0bd6cbfbd75c664 811 PANTHER PTHR33121:SF13 504 809 1.4E-86 T 22-04-2016 VP0092 dc957864572386f4d0bd6cbfbd75c664 811 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 550 7.6E-39 T 22-04-2016 IPR000160 GGDEF domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SMART SM00091 146 212 2.4 T 22-04-2016 IPR000014 PAS domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SMART SM00091 269 336 1.5E-8 T 22-04-2016 IPR000014 PAS domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SUPERFAMILY SSF141868 568 809 2.35E-87 T 22-04-2016 IPR001633 EAL domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SUPERFAMILY SSF55073 399 554 1.96E-45 T 22-04-2016 IPR029787 Nucleotide cyclase VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SMART SM00267 383 552 4.0E-61 T 22-04-2016 IPR000160 GGDEF domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 1.6E-23 T 22-04-2016 IPR000014 PAS domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 268 2.3E-8 T 22-04-2016 IPR000014 PAS domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SMART SM00086 341 383 1.4E-7 T 22-04-2016 IPR001610 PAC motif VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SMART SM00086 219 261 3.9 T 22-04-2016 IPR001610 PAC motif VP0092 dc957864572386f4d0bd6cbfbd75c664 811 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 547 2.4E-43 T 22-04-2016 IPR000160 GGDEF domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 Gene3D G3DSA:3.30.70.270 396 559 4.8E-50 T 22-04-2016 VP0092 dc957864572386f4d0bd6cbfbd75c664 811 Pfam PF13426 PAS domain 280 381 1.1E-18 T 22-04-2016 IPR000014 PAS domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 Gene3D G3DSA:3.30.450.20 259 377 1.4E-29 T 22-04-2016 VP0092 dc957864572386f4d0bd6cbfbd75c664 811 Gene3D G3DSA:3.20.20.450 566 809 7.4E-95 T 22-04-2016 IPR001633 EAL domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SMART SM00052 562 808 9.4E-117 T 22-04-2016 IPR001633 EAL domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SUPERFAMILY SSF55785 152 262 8.2E-17 T 22-04-2016 IPR000014 PAS domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 PANTHER PTHR33121 504 809 1.4E-86 T 22-04-2016 VP0092 dc957864572386f4d0bd6cbfbd75c664 811 Gene3D G3DSA:3.30.450.20 147 258 1.9E-16 T 22-04-2016 VP0092 dc957864572386f4d0bd6cbfbd75c664 811 SUPERFAMILY SSF55785 277 380 1.68E-28 T 22-04-2016 IPR000014 PAS domain VP0092 dc957864572386f4d0bd6cbfbd75c664 811 Pfam PF08448 PAS fold 156 262 1.8E-11 T 22-04-2016 IPR013656 PAS fold-4 VP0092 dc957864572386f4d0bd6cbfbd75c664 811 Pfam PF00563 EAL domain 568 803 7.0E-72 T 22-04-2016 IPR001633 EAL domain VP2987 6f98d288d141701b528ed1a7b1fe288b 842 PANTHER PTHR38760 2 829 0.0 T 22-04-2016 VP2987 6f98d288d141701b528ed1a7b1fe288b 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 2.1E-254 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VP2987 6f98d288d141701b528ed1a7b1fe288b 842 Pfam PF12633 Adenylate cyclase NT domain 7 198 4.4E-77 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VP2987 6f98d288d141701b528ed1a7b1fe288b 842 PIRSF PIRSF001444 1 842 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VP2816 45f0ca00116f86c96fc8582616075e8d 429 PANTHER PTHR10229 1 427 1.6E-185 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VP2816 45f0ca00116f86c96fc8582616075e8d 429 PIRSF PIRSF006809 3 423 2.6E-150 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VP2816 45f0ca00116f86c96fc8582616075e8d 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 8.9E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP2816 45f0ca00116f86c96fc8582616075e8d 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 8.9E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP2816 45f0ca00116f86c96fc8582616075e8d 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 8.9E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP2816 45f0ca00116f86c96fc8582616075e8d 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.8E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP2816 45f0ca00116f86c96fc8582616075e8d 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 2.5E-156 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VP2816 45f0ca00116f86c96fc8582616075e8d 429 SUPERFAMILY SSF54980 364 428 7.91E-19 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2816 45f0ca00116f86c96fc8582616075e8d 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.3E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal VP2816 45f0ca00116f86c96fc8582616075e8d 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.404 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VP2816 45f0ca00116f86c96fc8582616075e8d 429 SUPERFAMILY SSF52540 197 372 5.06E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2816 45f0ca00116f86c96fc8582616075e8d 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain VP2816 45f0ca00116f86c96fc8582616075e8d 429 PANTHER PTHR10229:SF0 1 427 1.6E-185 T 22-04-2016 VP2816 45f0ca00116f86c96fc8582616075e8d 429 Gene3D G3DSA:3.40.50.300 197 362 4.7E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1941 43ea47a2e6f6f951c4f1bec8564cff6c 417 PANTHER PTHR12286 3 409 4.8E-153 T 22-04-2016 VP1941 43ea47a2e6f6f951c4f1bec8564cff6c 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.1E-32 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VP1941 43ea47a2e6f6f951c4f1bec8564cff6c 417 SUPERFAMILY SSF51735 3 179 8.0E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1941 43ea47a2e6f6f951c4f1bec8564cff6c 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 395 4.3E-30 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal VP1941 43ea47a2e6f6f951c4f1bec8564cff6c 417 Gene3D G3DSA:3.40.50.720 2 196 2.6E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1941 43ea47a2e6f6f951c4f1bec8564cff6c 417 PANTHER PTHR12286:SF6 3 409 4.8E-153 T 22-04-2016 VP1903 d2a7b7bddf4d33abb44689bd0c436160 243 SMART SM00479 52 233 8.7E-21 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP1903 d2a7b7bddf4d33abb44689bd0c436160 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 48 233 3.3E-22 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1903 d2a7b7bddf4d33abb44689bd0c436160 243 Pfam PF00929 Exonuclease 54 224 8.2E-13 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP1903 d2a7b7bddf4d33abb44689bd0c436160 243 SUPERFAMILY SSF53098 44 231 2.36E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1903 d2a7b7bddf4d33abb44689bd0c436160 243 PANTHER PTHR30231 15 231 7.8E-68 T 22-04-2016 VP1903 d2a7b7bddf4d33abb44689bd0c436160 243 Gene3D G3DSA:3.30.420.10 45 233 1.2E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1903 d2a7b7bddf4d33abb44689bd0c436160 243 PANTHER PTHR30231:SF11 15 231 7.8E-68 T 22-04-2016 VP2510 f76a0dd491250c34052c7ba072bffbdf 256 Pfam PF01061 ABC-2 type transporter 8 218 2.2E-38 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 VP2510 f76a0dd491250c34052c7ba072bffbdf 256 PANTHER PTHR30413:SF2 3 256 1.8E-158 T 22-04-2016 VP2510 f76a0dd491250c34052c7ba072bffbdf 256 PIRSF PIRSF006648 5 253 2.7E-27 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VP2510 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VP2510 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VP2510 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VP2510 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VP2510 f76a0dd491250c34052c7ba072bffbdf 256 PANTHER PTHR30413 3 256 1.8E-158 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VP1408 d2ad8f0b33e388ff2c75a17d93676091 1129 PANTHER PTHR36153 96 1129 1.0E-102 T 22-04-2016 VP1408 d2ad8f0b33e388ff2c75a17d93676091 1129 Pfam PF06761 Intracellular multiplication and human macrophage-killing 498 755 2.0E-43 T 22-04-2016 IPR009612 ImcF-related VP1408 d2ad8f0b33e388ff2c75a17d93676091 1129 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 92 1127 4.1E-174 T 22-04-2016 IPR017731 Type VI secretion system, IcmF VP1408 d2ad8f0b33e388ff2c75a17d93676091 1129 Pfam PF14331 ImcF-related N-terminal domain 154 408 3.5E-53 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain VP1408 d2ad8f0b33e388ff2c75a17d93676091 1129 Pfam PF06744 Type VI secretion protein IcmF C-terminal 879 1078 2.0E-45 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal VP1408 d2ad8f0b33e388ff2c75a17d93676091 1129 PANTHER PTHR36153:SF1 96 1129 1.0E-102 T 22-04-2016 VP1190 3a67b918806860ce03b8b7406ff578fa 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 4.6E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1190 3a67b918806860ce03b8b7406ff578fa 509 SMART SM00382 214 358 4.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1190 3a67b918806860ce03b8b7406ff578fa 509 Gene3D G3DSA:3.40.50.300 191 366 3.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1190 3a67b918806860ce03b8b7406ff578fa 509 PANTHER PTHR32071:SF35 133 507 3.4E-145 T 22-04-2016 VP1190 3a67b918806860ce03b8b7406ff578fa 509 Pfam PF01590 GAF domain 23 158 1.0E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 VP1190 3a67b918806860ce03b8b7406ff578fa 509 PANTHER PTHR32071 133 507 3.4E-145 T 22-04-2016 VP1190 3a67b918806860ce03b8b7406ff578fa 509 SMART SM00065 21 170 1.6E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 VP1190 3a67b918806860ce03b8b7406ff578fa 509 Gene3D G3DSA:1.10.8.60 368 416 5.1E-15 T 22-04-2016 VP1190 3a67b918806860ce03b8b7406ff578fa 509 SUPERFAMILY SSF46689 459 507 9.41E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1190 3a67b918806860ce03b8b7406ff578fa 509 Gene3D G3DSA:3.30.450.40 9 174 4.9E-15 T 22-04-2016 IPR029016 GAF domain-like VP1190 3a67b918806860ce03b8b7406ff578fa 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP1190 3a67b918806860ce03b8b7406ff578fa 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP1190 3a67b918806860ce03b8b7406ff578fa 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 488 9.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1190 3a67b918806860ce03b8b7406ff578fa 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 508 9.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1190 3a67b918806860ce03b8b7406ff578fa 509 SUPERFAMILY SSF52540 193 437 4.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1190 3a67b918806860ce03b8b7406ff578fa 509 Pfam PF00158 Sigma-54 interaction domain 195 361 1.6E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP1190 3a67b918806860ce03b8b7406ff578fa 509 SUPERFAMILY SSF55781 7 163 3.93E-18 T 22-04-2016 IPR029016 GAF domain-like VP1190 3a67b918806860ce03b8b7406ff578fa 509 Gene3D G3DSA:1.10.10.60 417 507 3.6E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1143 99eb83aa79bcbac7163406093c3ba22f 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.1E-79 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VP1143 99eb83aa79bcbac7163406093c3ba22f 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.905 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VP1143 99eb83aa79bcbac7163406093c3ba22f 257 PANTHER PTHR21235:SF2 1 257 1.5E-119 T 22-04-2016 VP1143 99eb83aa79bcbac7163406093c3ba22f 257 SUPERFAMILY SSF51366 1 256 1.1E-74 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VP1143 99eb83aa79bcbac7163406093c3ba22f 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.6E-114 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VP1143 99eb83aa79bcbac7163406093c3ba22f 257 Gene3D G3DSA:3.20.20.70 4 257 1.8E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1143 99eb83aa79bcbac7163406093c3ba22f 257 PANTHER PTHR21235 1 257 1.5E-119 T 22-04-2016 VP2876 079baa3efcf485ed92ec8f849e962da9 608 Gene3D G3DSA:2.60.120.10 8 128 1.9E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP2876 079baa3efcf485ed92ec8f849e962da9 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 604 4.9E-39 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VP2876 079baa3efcf485ed92ec8f849e962da9 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 2.4E-42 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VP2876 079baa3efcf485ed92ec8f849e962da9 608 SUPERFAMILY SSF51206 8 128 2.09E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP2876 079baa3efcf485ed92ec8f849e962da9 608 PANTHER PTHR11911:SF68 147 356 2.1E-33 T 22-04-2016 VP2876 079baa3efcf485ed92ec8f849e962da9 608 Gene3D G3DSA:3.10.580.10 148 277 6.9E-16 T 22-04-2016 VP2876 079baa3efcf485ed92ec8f849e962da9 608 PANTHER PTHR11911 147 356 2.1E-33 T 22-04-2016 VP2876 079baa3efcf485ed92ec8f849e962da9 608 SUPERFAMILY SSF54631 144 276 2.75E-16 T 22-04-2016 VP2876 079baa3efcf485ed92ec8f849e962da9 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.2E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP2638 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF51055 383 426 1.07E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 Pfam PF01522 Polysaccharide deacetylase 23 126 1.2E-12 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 Pfam PF02839 Carbohydrate binding domain 333 375 2.0E-5 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 Gene3D G3DSA:2.10.10.20 383 426 1.8E-16 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 Gene3D G3DSA:2.10.10.20 335 377 3.5E-15 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF51055 334 377 1.83E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF88713 29 101 3.71E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF88713 192 336 3.71E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF88713 129 158 3.71E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 Gene3D G3DSA:3.20.20.370 166 334 1.7E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 Gene3D G3DSA:3.20.20.370 23 97 1.7E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 SMART SM00495 381 427 4.0 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2638 ca47420ebb1c7a81be7625bbf206303b 427 SMART SM00495 332 378 6.7E-4 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 PANTHER PTHR31689:SF0 1 275 1.1E-142 T 22-04-2016 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 Gene3D G3DSA:3.10.310.10 123 264 5.6E-52 T 22-04-2016 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.5E-101 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 PANTHER PTHR31689 1 275 1.1E-142 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 Gene3D G3DSA:3.10.310.10 4 122 1.6E-49 T 22-04-2016 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 Pfam PF01678 Diaminopimelate epimerase 154 269 7.1E-32 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 Pfam PF01678 Diaminopimelate epimerase 5 124 2.0E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.622 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2983 a62fc6368eb4808b22adf395aa2367aa 276 SUPERFAMILY SSF54506 2 274 1.01E-52 T 22-04-2016 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 PANTHER PTHR30115 1 112 4.4E-81 T 22-04-2016 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 SMART SM00938 4 105 2.3E-68 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 PANTHER PTHR30115:SF15 1 112 4.4E-81 T 22-04-2016 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 52 75 6.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 83 103 6.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 23 41 6.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 2 17 6.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 PIRSF PIRSF039144 1 112 8.9E-56 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 Gene3D G3DSA:3.30.70.120 1 112 8.3E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VP2493 6546fa979e1da1fc69d387a25b8d4279 112 SUPERFAMILY SSF54913 1 112 2.8E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VP2493 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2493 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VP3024 93f3d23acc769423ece4e9259647aad7 67 Gene3D G3DSA:3.10.20.30 2 67 1.1E-21 T 22-04-2016 IPR012675 Beta-grasp domain VP3024 93f3d23acc769423ece4e9259647aad7 67 PANTHER PTHR34472:SF1 1 67 8.0E-17 T 22-04-2016 VP3024 93f3d23acc769423ece4e9259647aad7 67 PANTHER PTHR34472 1 67 8.0E-17 T 22-04-2016 VP3024 93f3d23acc769423ece4e9259647aad7 67 SUPERFAMILY SSF54285 2 67 1.06E-14 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VP3024 93f3d23acc769423ece4e9259647aad7 67 Pfam PF02597 ThiS family 8 67 4.2E-13 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VP3024 93f3d23acc769423ece4e9259647aad7 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 3.6E-17 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis VP1102 8c8ab28318eef7d4d8d09d6a44f76532 398 SUPERFAMILY SSF53335 118 198 9.57E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1102 8c8ab28318eef7d4d8d09d6a44f76532 398 PANTHER PTHR13369:SF1 98 250 1.4E-84 T 22-04-2016 VP1102 8c8ab28318eef7d4d8d09d6a44f76532 398 PANTHER PTHR13369:SF1 322 397 1.4E-84 T 22-04-2016 VP1102 8c8ab28318eef7d4d8d09d6a44f76532 398 Gene3D G3DSA:3.40.50.150 117 184 3.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1102 8c8ab28318eef7d4d8d09d6a44f76532 398 PANTHER PTHR13369 98 250 1.4E-84 T 22-04-2016 VP1102 8c8ab28318eef7d4d8d09d6a44f76532 398 PANTHER PTHR13369 322 397 1.4E-84 T 22-04-2016 VP1102 8c8ab28318eef7d4d8d09d6a44f76532 398 Pfam PF13679 Methyltransferase domain 108 230 8.4E-18 T 22-04-2016 IPR025714 Methyltransferase domain VP0138 42964e2ef2451b2ae3e4a9e3371df274 109 SUPERFAMILY SSF54523 29 107 7.06E-23 T 22-04-2016 VP0138 42964e2ef2451b2ae3e4a9e3371df274 109 Gene3D G3DSA:3.30.1300.30 24 108 1.5E-29 T 22-04-2016 VP0138 42964e2ef2451b2ae3e4a9e3371df274 109 PANTHER PTHR38779:SF2 1 109 2.4E-36 T 22-04-2016 VP0138 42964e2ef2451b2ae3e4a9e3371df274 109 Pfam PF02501 Type II secretion system (T2SS), protein I 32 107 1.6E-21 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VP0138 42964e2ef2451b2ae3e4a9e3371df274 109 PANTHER PTHR38779 1 109 2.4E-36 T 22-04-2016 VP0138 42964e2ef2451b2ae3e4a9e3371df274 109 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 95 7.8E-34 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 PANTHER PTHR11349 1 140 1.4E-77 T 22-04-2016 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 6.2E-59 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 SMART SM00562 3 140 5.3E-91 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 SUPERFAMILY SSF54919 1 140 2.62E-61 T 22-04-2016 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 Gene3D G3DSA:3.30.70.141 1 139 1.6E-60 T 22-04-2016 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP0604 9169a1952f56aa9b6b339c03436ccdf9 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.359 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1249 80f37a102889fe88fd79aea99b2f7707 573 Gene3D G3DSA:1.20.1560.10 8 327 2.1E-31 T 22-04-2016 VP1249 80f37a102889fe88fd79aea99b2f7707 573 PANTHER PTHR24222:SF30 1 573 1.4E-235 T 22-04-2016 VP1249 80f37a102889fe88fd79aea99b2f7707 573 SUPERFAMILY SSF52540 335 571 8.98E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1249 80f37a102889fe88fd79aea99b2f7707 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 4.0E-133 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 VP1249 80f37a102889fe88fd79aea99b2f7707 573 SUPERFAMILY SSF90123 7 323 2.49E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1249 80f37a102889fe88fd79aea99b2f7707 573 SMART SM00382 365 549 2.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1249 80f37a102889fe88fd79aea99b2f7707 573 Pfam PF00664 ABC transporter transmembrane region 26 272 1.6E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1249 80f37a102889fe88fd79aea99b2f7707 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1249 80f37a102889fe88fd79aea99b2f7707 573 PANTHER PTHR24222 1 573 1.4E-235 T 22-04-2016 VP1249 80f37a102889fe88fd79aea99b2f7707 573 Pfam PF00005 ABC transporter 356 502 2.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1249 80f37a102889fe88fd79aea99b2f7707 573 Gene3D G3DSA:3.40.50.300 339 568 1.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2473 6bcf80059b40604e111e9a89be3de7f6 371 Gene3D G3DSA:2.40.50.100 175 208 1.1E-15 T 22-04-2016 VP2473 6bcf80059b40604e111e9a89be3de7f6 371 Gene3D G3DSA:2.40.50.100 81 114 1.1E-15 T 22-04-2016 VP2473 6bcf80059b40604e111e9a89be3de7f6 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 273 2.9E-21 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VP2473 6bcf80059b40604e111e9a89be3de7f6 371 PANTHER PTHR30469:SF15 1 368 9.1E-75 T 22-04-2016 VP2473 6bcf80059b40604e111e9a89be3de7f6 371 PANTHER PTHR30469 1 368 9.1E-75 T 22-04-2016 VP2473 6bcf80059b40604e111e9a89be3de7f6 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 356 3.3E-49 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VP2473 6bcf80059b40604e111e9a89be3de7f6 371 SUPERFAMILY SSF111369 69 284 3.92E-32 T 22-04-2016 VP2819 e07613d5da1b3238eddcc220a227a05d 669 SUPERFAMILY SSF118116 483 668 4.97E-38 T 22-04-2016 VP2819 e07613d5da1b3238eddcc220a227a05d 669 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 667 25.151 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VP2819 e07613d5da1b3238eddcc220a227a05d 669 SUPERFAMILY SSF54211 191 330 2.31E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP2819 e07613d5da1b3238eddcc220a227a05d 669 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site VP2819 e07613d5da1b3238eddcc220a227a05d 669 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 7.9E-40 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 VP2819 e07613d5da1b3238eddcc220a227a05d 669 SUPERFAMILY SSF55874 1 207 9.3E-54 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2819 e07613d5da1b3238eddcc220a227a05d 669 Gene3D G3DSA:3.30.565.10 1 217 2.3E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2819 e07613d5da1b3238eddcc220a227a05d 669 SMART SM01340 212 330 3.5E-59 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 VP2819 e07613d5da1b3238eddcc220a227a05d 669 Pfam PF08676 MutL C terminal dimerisation domain 483 623 5.2E-29 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VP2819 e07613d5da1b3238eddcc220a227a05d 669 PANTHER PTHR10073 3 333 2.8E-153 T 22-04-2016 VP2819 e07613d5da1b3238eddcc220a227a05d 669 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 2.8E-11 T 22-04-2016 VP2819 e07613d5da1b3238eddcc220a227a05d 669 SMART SM00853 486 629 1.5E-15 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VP2819 e07613d5da1b3238eddcc220a227a05d 669 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.2E-103 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 VP2819 e07613d5da1b3238eddcc220a227a05d 669 Gene3D G3DSA:3.30.230.10 218 329 1.7E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP1169 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 SUPERFAMILY SSF161098 89 276 7.98E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1169 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 PANTHER PTHR30465 7 295 7.5E-159 T 22-04-2016 VP1169 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 1.0E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1169 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.3E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VP1169 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 PANTHER PTHR30465:SF49 7 295 7.5E-159 T 22-04-2016 VP1169 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Gene3D G3DSA:1.10.3720.10 89 291 2.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0018 fc8d05ad8946bf0bc01d2fbddc10dd12 145 PANTHER PTHR11527:SF145 5 144 3.4E-52 T 22-04-2016 VP0018 fc8d05ad8946bf0bc01d2fbddc10dd12 145 SUPERFAMILY SSF49764 6 137 4.19E-23 T 22-04-2016 IPR008978 HSP20-like chaperone VP0018 fc8d05ad8946bf0bc01d2fbddc10dd12 145 PANTHER PTHR11527 5 144 3.4E-52 T 22-04-2016 IPR031107 Small heat shock protein HSP20 VP0018 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Gene3D G3DSA:2.60.40.790 5 136 1.4E-17 T 22-04-2016 IPR008978 HSP20-like chaperone VP0018 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.3E-19 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VP1136 cad50155dcef87063f59ff73a04517af 318 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 317 7.9E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1136 cad50155dcef87063f59ff73a04517af 318 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 280 297 7.9E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1136 cad50155dcef87063f59ff73a04517af 318 SMART SM00382 43 187 3.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1136 cad50155dcef87063f59ff73a04517af 318 PANTHER PTHR32071 17 318 5.9E-136 T 22-04-2016 VP1136 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:1.10.8.60 196 265 9.8E-21 T 22-04-2016 VP1136 cad50155dcef87063f59ff73a04517af 318 SUPERFAMILY SSF52540 23 261 8.64E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1136 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:1.10.10.60 266 317 2.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1136 cad50155dcef87063f59ff73a04517af 318 Pfam PF02954 Bacterial regulatory protein, Fis family 274 314 4.2E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1136 cad50155dcef87063f59ff73a04517af 318 SUPERFAMILY SSF46689 233 317 2.82E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1136 cad50155dcef87063f59ff73a04517af 318 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 109 124 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP1136 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:3.40.50.300 22 195 2.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1136 cad50155dcef87063f59ff73a04517af 318 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 233 242 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP1136 cad50155dcef87063f59ff73a04517af 318 Pfam PF00158 Sigma-54 interaction domain 23 189 1.1E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP1663 6d101c0bb4d114d4584e5ab06e1bdf60 114 Gene3D G3DSA:1.25.40.10 5 106 5.3E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1663 6d101c0bb4d114d4584e5ab06e1bdf60 114 Pfam PF14559 Tetratricopeptide repeat 19 74 4.8E-10 T 22-04-2016 VP1663 6d101c0bb4d114d4584e5ab06e1bdf60 114 SUPERFAMILY SSF48452 5 111 6.99E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1663 6d101c0bb4d114d4584e5ab06e1bdf60 114 PIRSF PIRSF017117 1 112 2.3E-43 T 22-04-2016 IPR016684 Type III secretion system chaperone, YscY VP0168 8d4466814fd36a8d0cea405183398be0 866 PANTHER PTHR30069 6 769 7.1E-123 T 22-04-2016 VP0168 8d4466814fd36a8d0cea405183398be0 866 Gene3D G3DSA:2.170.130.10 53 168 1.1E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VP0168 8d4466814fd36a8d0cea405183398be0 866 SUPERFAMILY SSF56935 628 672 3.48E-89 T 22-04-2016 VP0168 8d4466814fd36a8d0cea405183398be0 866 SUPERFAMILY SSF56935 699 866 3.48E-89 T 22-04-2016 VP0168 8d4466814fd36a8d0cea405183398be0 866 SUPERFAMILY SSF56935 302 590 3.48E-89 T 22-04-2016 VP0168 8d4466814fd36a8d0cea405183398be0 866 SUPERFAMILY SSF56935 28 225 3.48E-89 T 22-04-2016 VP0168 8d4466814fd36a8d0cea405183398be0 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 1.2E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VP0168 8d4466814fd36a8d0cea405183398be0 866 Gene3D G3DSA:2.40.170.20 169 228 4.9E-80 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VP0168 8d4466814fd36a8d0cea405183398be0 866 Gene3D G3DSA:2.40.170.20 270 866 4.9E-80 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VP0168 8d4466814fd36a8d0cea405183398be0 866 Pfam PF00593 TonB dependent receptor 561 862 1.9E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VP0168 8d4466814fd36a8d0cea405183398be0 866 PANTHER PTHR30069:SF7 6 769 7.1E-123 T 22-04-2016 VP2123 f019e63641f18cc8d7a6908155b92716 285 PANTHER PTHR11537:SF137 6 282 5.7E-96 T 22-04-2016 VP2123 f019e63641f18cc8d7a6908155b92716 285 PANTHER PTHR11537 6 282 5.7E-96 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP2123 f019e63641f18cc8d7a6908155b92716 285 SUPERFAMILY SSF81324 28 239 3.06E-51 T 22-04-2016 VP2123 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 183 205 1.3E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP2123 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 63 86 1.3E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP2123 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 21 49 1.3E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP2123 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 89 109 1.3E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP2123 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 212 238 1.3E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP2123 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 154 177 1.3E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP2123 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 125 151 1.3E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP2123 f019e63641f18cc8d7a6908155b92716 285 Pfam PF00520 Ion transport protein 29 240 6.3E-31 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VP2123 f019e63641f18cc8d7a6908155b92716 285 Gene3D G3DSA:1.10.287.70 29 238 1.9E-51 T 22-04-2016 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 SUPERFAMILY SSF54913 3 114 2.1E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 PANTHER PTHR30115 1 114 3.2E-68 T 22-04-2016 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 Gene3D G3DSA:3.30.70.120 3 114 3.5E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 PIRSF PIRSF039144 3 114 2.3E-58 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 25 43 4.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 4 19 4.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 85 105 4.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 54 77 4.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP2299 f76ec64fbf1fda4ad97d52a83d61c238 114 SMART SM00938 6 107 7.9E-70 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP0222 458e1220616d3936feef7e54003cf981 362 PANTHER PTHR10366 2 357 6.5E-185 T 22-04-2016 VP0222 458e1220616d3936feef7e54003cf981 362 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 3.4E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0222 458e1220616d3936feef7e54003cf981 362 Gene3D G3DSA:3.90.25.10 200 349 5.6E-56 T 22-04-2016 VP0222 458e1220616d3936feef7e54003cf981 362 PANTHER PTHR10366:SF41 2 357 6.5E-185 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VP0222 458e1220616d3936feef7e54003cf981 362 Gene3D G3DSA:3.40.50.720 1 199 2.6E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0222 458e1220616d3936feef7e54003cf981 362 SUPERFAMILY SSF51735 1 342 3.4E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0222 458e1220616d3936feef7e54003cf981 362 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 344 8.6E-152 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VP0007 796c7190263bdecf90ba1cb50431be1e 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.5E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VP0007 796c7190263bdecf90ba1cb50431be1e 223 Gene3D G3DSA:1.10.3720.10 14 219 1.8E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0007 796c7190263bdecf90ba1cb50431be1e 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 2.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0007 796c7190263bdecf90ba1cb50431be1e 223 PANTHER PTHR30614:SF16 1 223 5.9E-138 T 22-04-2016 VP0007 796c7190263bdecf90ba1cb50431be1e 223 SUPERFAMILY SSF161098 13 203 2.62E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0007 796c7190263bdecf90ba1cb50431be1e 223 PANTHER PTHR30614 1 223 5.9E-138 T 22-04-2016 VP0644 8a22ca959255df171507f7b351d580a9 161 PANTHER PTHR30308:SF2 2 161 3.9E-77 T 22-04-2016 VP0644 8a22ca959255df171507f7b351d580a9 161 PANTHER PTHR30308 2 161 3.9E-77 T 22-04-2016 VP0644 8a22ca959255df171507f7b351d580a9 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.3E-52 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VP0644 8a22ca959255df171507f7b351d580a9 161 Gene3D G3DSA:2.40.280.10 14 134 1.1E-47 T 22-04-2016 IPR023620 Small protein B VP0644 8a22ca959255df171507f7b351d580a9 161 SUPERFAMILY SSF74982 8 139 4.97E-48 T 22-04-2016 IPR023620 Small protein B VP0644 8a22ca959255df171507f7b351d580a9 161 Pfam PF01668 SmpB protein 14 77 7.0E-28 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VP0644 8a22ca959255df171507f7b351d580a9 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site VP0644 8a22ca959255df171507f7b351d580a9 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.072 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VP0644 8a22ca959255df171507f7b351d580a9 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-61 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 124 259 1.1E-16 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 109 6.8E-27 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 Gene3D G3DSA:3.40.50.620 3 143 1.6E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 Gene3D G3DSA:3.40.50.620 156 285 1.1E-17 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 2.3E-112 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 40.062 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 PANTHER PTHR11451:SF35 3 219 1.8E-109 T 22-04-2016 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 PANTHER PTHR11451 3 219 1.8E-109 T 22-04-2016 VP2502 d82fc2c57532d5aa953d4d27cb47dfd3 294 SUPERFAMILY SSF52374 4 280 7.7E-84 T 22-04-2016 VP2861 473bd9664ae64024bc75047e834989ab 159 PIRSF PIRSF029256 1 159 3.6E-66 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VP2861 473bd9664ae64024bc75047e834989ab 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 3.5E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VP2861 473bd9664ae64024bc75047e834989ab 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.718 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VP2861 473bd9664ae64024bc75047e834989ab 159 PANTHER PTHR12029 1 158 3.0E-75 T 22-04-2016 VP2861 473bd9664ae64024bc75047e834989ab 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 1.4E-58 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VP2861 473bd9664ae64024bc75047e834989ab 159 SUPERFAMILY SSF75217 2 157 3.73E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VP2861 473bd9664ae64024bc75047e834989ab 159 Gene3D G3DSA:3.40.1280.10 1 158 3.1E-65 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VP2861 473bd9664ae64024bc75047e834989ab 159 PANTHER PTHR12029:SF31 1 158 3.0E-75 T 22-04-2016 VPA0784 60d38bf82473c16885951d0a516e7fe4 168 Pfam PF07559 Flagellar basal body protein FlaE 27 163 1.1E-22 T 22-04-2016 IPR011491 Flagellar hook protein FlgE VPA0784 60d38bf82473c16885951d0a516e7fe4 168 SUPERFAMILY SSF117143 1 167 1.7E-22 T 22-04-2016 VP2446 4bffa0de7adbff519855a14d74bac928 679 Pfam PF08448 PAS fold 15 119 1.2E-6 T 22-04-2016 IPR013656 PAS fold-4 VP2446 4bffa0de7adbff519855a14d74bac928 679 SUPERFAMILY SSF55073 258 412 2.43E-45 T 22-04-2016 IPR029787 Nucleotide cyclase VP2446 4bffa0de7adbff519855a14d74bac928 679 Gene3D G3DSA:3.30.450.20 119 210 1.6E-8 T 22-04-2016 VP2446 4bffa0de7adbff519855a14d74bac928 679 Gene3D G3DSA:3.30.450.20 6 111 9.6E-10 T 22-04-2016 VP2446 4bffa0de7adbff519855a14d74bac928 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 407 1.8E-36 T 22-04-2016 IPR000160 GGDEF domain VP2446 4bffa0de7adbff519855a14d74bac928 679 Gene3D G3DSA:3.30.70.270 255 418 1.2E-50 T 22-04-2016 VP2446 4bffa0de7adbff519855a14d74bac928 679 PANTHER PTHR33121:SF13 372 678 6.2E-81 T 22-04-2016 VP2446 4bffa0de7adbff519855a14d74bac928 679 SUPERFAMILY SSF55785 115 210 1.94E-8 T 22-04-2016 IPR000014 PAS domain VP2446 4bffa0de7adbff519855a14d74bac928 679 Gene3D G3DSA:3.20.20.450 424 673 6.0E-93 T 22-04-2016 IPR001633 EAL domain VP2446 4bffa0de7adbff519855a14d74bac928 679 PANTHER PTHR33121 372 678 6.2E-81 T 22-04-2016 VP2446 4bffa0de7adbff519855a14d74bac928 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.8E-42 T 22-04-2016 IPR000160 GGDEF domain VP2446 4bffa0de7adbff519855a14d74bac928 679 SMART SM00267 243 410 2.0E-52 T 22-04-2016 IPR000160 GGDEF domain VP2446 4bffa0de7adbff519855a14d74bac928 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 1.1E-7 T 22-04-2016 IPR000014 PAS domain VP2446 4bffa0de7adbff519855a14d74bac928 679 SUPERFAMILY SSF55785 5 115 1.17E-9 T 22-04-2016 IPR000014 PAS domain VP2446 4bffa0de7adbff519855a14d74bac928 679 Pfam PF13188 PAS domain 133 176 1.3E-5 T 22-04-2016 IPR000014 PAS domain VP2446 4bffa0de7adbff519855a14d74bac928 679 SMART SM00091 8 74 0.0052 T 22-04-2016 IPR000014 PAS domain VP2446 4bffa0de7adbff519855a14d74bac928 679 SMART SM00091 131 198 0.039 T 22-04-2016 IPR000014 PAS domain VP2446 4bffa0de7adbff519855a14d74bac928 679 Pfam PF00563 EAL domain 427 661 5.1E-72 T 22-04-2016 IPR001633 EAL domain VP2446 4bffa0de7adbff519855a14d74bac928 679 SUPERFAMILY SSF141868 427 674 1.44E-83 T 22-04-2016 IPR001633 EAL domain VP2446 4bffa0de7adbff519855a14d74bac928 679 SMART SM00052 420 666 4.8E-106 T 22-04-2016 IPR001633 EAL domain VP0602 f14fb03099df745256208bf077cd3c39 64 PIRSF PIRSF039003 1 64 2.9E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VP0602 f14fb03099df745256208bf077cd3c39 64 SUPERFAMILY SSF140319 1 62 3.4E-29 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VP0602 f14fb03099df745256208bf077cd3c39 64 PANTHER PTHR37532:SF1 1 64 3.5E-32 T 22-04-2016 VP0602 f14fb03099df745256208bf077cd3c39 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.8E-36 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VP0602 f14fb03099df745256208bf077cd3c39 64 PANTHER PTHR37532 1 64 3.5E-32 T 22-04-2016 VP0602 f14fb03099df745256208bf077cd3c39 64 Gene3D G3DSA:1.10.10.600 1 64 1.3E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VP0602 f14fb03099df745256208bf077cd3c39 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 7.8E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VP2560 bb6a90c009c5f6ae351f3bc642bc32eb 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 37.013 T 22-04-2016 IPR023081 Cell division protein FtsB VP2560 bb6a90c009c5f6ae351f3bc642bc32eb 93 PANTHER PTHR37485 2 92 6.8E-45 T 22-04-2016 VP2560 bb6a90c009c5f6ae351f3bc642bc32eb 93 PANTHER PTHR37485:SF1 2 92 6.8E-45 T 22-04-2016 VP2560 bb6a90c009c5f6ae351f3bc642bc32eb 93 Pfam PF04977 Septum formation initiator 11 89 9.1E-30 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 VP0951 d142b4bb2b936f4fe374aa822e8a5ff7 100 PANTHER PTHR10815:SF2 1 100 3.9E-42 T 22-04-2016 VP0951 d142b4bb2b936f4fe374aa822e8a5ff7 100 Gene3D G3DSA:1.10.10.10 3 86 5.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0951 d142b4bb2b936f4fe374aa822e8a5ff7 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 2.7E-24 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VP0951 d142b4bb2b936f4fe374aa822e8a5ff7 100 SUPERFAMILY SSF46767 2 84 3.27E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VP0951 d142b4bb2b936f4fe374aa822e8a5ff7 100 PANTHER PTHR10815 1 100 3.9E-42 T 22-04-2016 VP2776 e4804df6c9002d929b7e6b9c7e300a2d 131 PANTHER PTHR34874:SF1 4 131 9.1E-57 T 22-04-2016 VP2776 e4804df6c9002d929b7e6b9c7e300a2d 131 PANTHER PTHR34874 4 131 9.1E-57 T 22-04-2016 VP2776 e4804df6c9002d929b7e6b9c7e300a2d 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 5.6E-55 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VP2776 e4804df6c9002d929b7e6b9c7e300a2d 131 Gene3D G3DSA:3.40.1260.10 6 131 2.9E-32 T 22-04-2016 IPR027396 DsrEFH-like VP2776 e4804df6c9002d929b7e6b9c7e300a2d 131 SUPERFAMILY SSF75169 6 131 1.02E-38 T 22-04-2016 IPR027396 DsrEFH-like VP2776 e4804df6c9002d929b7e6b9c7e300a2d 131 Pfam PF02635 DsrE/DsrF-like family 6 131 6.6E-28 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VP0797 7efbc76cfe412725899959eff3acc2e2 322 PANTHER PTHR10314:SF110 3 322 2.5E-161 T 22-04-2016 VP0797 7efbc76cfe412725899959eff3acc2e2 322 SUPERFAMILY SSF53686 3 313 1.31E-95 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP0797 7efbc76cfe412725899959eff3acc2e2 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 6.8E-142 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VP0797 7efbc76cfe412725899959eff3acc2e2 322 PANTHER PTHR10314 3 322 2.5E-161 T 22-04-2016 VP0797 7efbc76cfe412725899959eff3acc2e2 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.2E-134 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VP0797 7efbc76cfe412725899959eff3acc2e2 322 Gene3D G3DSA:3.40.50.1100 36 132 1.4E-37 T 22-04-2016 VP0797 7efbc76cfe412725899959eff3acc2e2 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VP0797 7efbc76cfe412725899959eff3acc2e2 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.4E-67 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP0797 7efbc76cfe412725899959eff3acc2e2 322 Gene3D G3DSA:3.40.50.1100 133 312 4.0E-74 T 22-04-2016 VP1480 298ce093d4901c78a4b766f21429396a 203 PANTHER PTHR21098:SF4 1 201 5.7E-115 T 22-04-2016 VP1480 298ce093d4901c78a4b766f21429396a 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 5.9E-75 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP1480 298ce093d4901c78a4b766f21429396a 203 PIRSF PIRSF000498 1 203 5.8E-67 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP1480 298ce093d4901c78a4b766f21429396a 203 SUPERFAMILY SSF63380 93 198 1.87E-30 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP1480 298ce093d4901c78a4b766f21429396a 203 PANTHER PTHR21098 1 201 5.7E-115 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP1480 298ce093d4901c78a4b766f21429396a 203 SUPERFAMILY SSF63380 1 93 4.34E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP1480 298ce093d4901c78a4b766f21429396a 203 Gene3D G3DSA:2.40.30.20 5 104 2.2E-29 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP1480 298ce093d4901c78a4b766f21429396a 203 Gene3D G3DSA:2.40.30.20 105 198 1.1E-26 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP1480 298ce093d4901c78a4b766f21429396a 203 Pfam PF00677 Lumazine binding domain 100 184 5.1E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP1480 298ce093d4901c78a4b766f21429396a 203 Pfam PF00677 Lumazine binding domain 3 87 2.1E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP2064 2e963b3578914dfa61619ac9f225d09c 149 SUPERFAMILY SSF52788 1 149 2.49E-48 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VP2064 2e963b3578914dfa61619ac9f225d09c 149 PANTHER PTHR11717 1 149 4.9E-56 T 22-04-2016 VP2064 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 8.9E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VP2064 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 8.9E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VP2064 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 8.9E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VP2064 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 8.9E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VP2064 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 8.9E-25 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VP2064 2e963b3578914dfa61619ac9f225d09c 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 144 6.8E-38 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VP2064 2e963b3578914dfa61619ac9f225d09c 149 SMART SM00226 2 148 5.4E-43 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VP2064 2e963b3578914dfa61619ac9f225d09c 149 PANTHER PTHR11717:SF7 1 149 4.9E-56 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VP2064 2e963b3578914dfa61619ac9f225d09c 149 Gene3D G3DSA:3.40.50.270 1 149 1.7E-50 T 22-04-2016 VP1033 3f50b12f4875a4c99f58fd60a3264586 261 PANTHER PTHR30336:SF1 1 254 1.5E-74 T 22-04-2016 VP1033 3f50b12f4875a4c99f58fd60a3264586 261 PANTHER PTHR30336 1 254 1.5E-74 T 22-04-2016 VP1033 3f50b12f4875a4c99f58fd60a3264586 261 Gene3D G3DSA:3.40.50.620 79 210 2.8E-16 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1033 3f50b12f4875a4c99f58fd60a3264586 261 Pfam PF02698 DUF218 domain 80 242 2.1E-28 T 22-04-2016 IPR003848 Domain of unknown function DUF218 VP0878 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 2.4E-26 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VP0878 a126cb83962c41f5bc876fbe0494389d 399 PANTHER PTHR10590 3 396 4.4E-184 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VP0878 a126cb83962c41f5bc876fbe0494389d 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 6.4E-134 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VP0878 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF07670 Nucleoside recognition 87 182 1.9E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VP0878 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 4.5E-71 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VP1532 164e558fcf6e15ab199b7baa2ff518ed 219 Pfam PF11205 Protein of unknown function (DUF2987) 21 165 2.6E-52 T 22-04-2016 IPR021370 Protein of unknown function DUF2987 VP2172 8051d28c137d5015d4c4f96a24c288b0 252 PANTHER PTHR35568 28 249 5.2E-90 T 22-04-2016 VP2172 8051d28c137d5015d4c4f96a24c288b0 252 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 48 147 1.0E-52 T 22-04-2016 IPR013559 YheO-like VP2172 8051d28c137d5015d4c4f96a24c288b0 252 Pfam PF13309 HTH domain 190 247 6.2E-15 T 22-04-2016 VP2172 8051d28c137d5015d4c4f96a24c288b0 252 PANTHER PTHR35568:SF2 28 249 5.2E-90 T 22-04-2016 VP2172 8051d28c137d5015d4c4f96a24c288b0 252 Pfam PF08348 YheO-like PAS domain 47 154 3.7E-34 T 22-04-2016 IPR013559 YheO-like VP1997 df1734bd0422dc5d580e7a61e4a015e2 404 PANTHER PTHR30572 1 403 6.5E-63 T 22-04-2016 VP1997 df1734bd0422dc5d580e7a61e4a015e2 404 Pfam PF02687 FtsX-like permease family 282 396 2.4E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VP1997 df1734bd0422dc5d580e7a61e4a015e2 404 Pfam PF12704 MacB-like periplasmic core domain 19 236 2.2E-23 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VP2305 849b1dc1b813e58e47d4c69bf71b3a6b 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 2.5E-145 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VP2305 849b1dc1b813e58e47d4c69bf71b3a6b 379 Gene3D G3DSA:3.40.50.2000 162 346 5.9E-5 T 22-04-2016 VP2305 849b1dc1b813e58e47d4c69bf71b3a6b 379 SUPERFAMILY SSF53756 6 379 5.02E-28 T 22-04-2016 VP2305 849b1dc1b813e58e47d4c69bf71b3a6b 379 PANTHER PTHR30372 1 378 1.3E-134 T 22-04-2016 VP2305 849b1dc1b813e58e47d4c69bf71b3a6b 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 1.2E-131 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VP2305 849b1dc1b813e58e47d4c69bf71b3a6b 379 PANTHER PTHR30372:SF0 1 378 1.3E-134 T 22-04-2016 VP2305 849b1dc1b813e58e47d4c69bf71b3a6b 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.118 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.7E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 SUPERFAMILY SSF75445 127 198 7.19E-24 T 22-04-2016 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 Gene3D G3DSA:3.30.70.260 137 196 2.7E-30 T 22-04-2016 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 PANTHER PTHR11934 1 218 3.3E-144 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 PANTHER PTHR11934:SF11 1 218 3.3E-144 T 22-04-2016 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 4.3E-69 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 Gene3D G3DSA:3.40.50.1360 1 136 1.4E-57 T 22-04-2016 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.578 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VP2592 c8c0e0d0f78707753311bb6d94bc1b99 218 SUPERFAMILY SSF100950 1 146 9.3E-47 T 22-04-2016 VP1233 fe2ea6abada0f5c180216822764d93ee 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 1.4E-46 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VP1233 fe2ea6abada0f5c180216822764d93ee 88 SUPERFAMILY SSF52833 3 81 3.71E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1233 fe2ea6abada0f5c180216822764d93ee 88 PANTHER PTHR10168:SF85 1 81 2.0E-41 T 22-04-2016 VP1233 fe2ea6abada0f5c180216822764d93ee 88 Gene3D G3DSA:3.40.30.10 2 81 3.8E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1233 fe2ea6abada0f5c180216822764d93ee 88 Pfam PF00462 Glutaredoxin 3 69 3.4E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VP1233 fe2ea6abada0f5c180216822764d93ee 88 PANTHER PTHR10168 1 81 2.0E-41 T 22-04-2016 VP1233 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 3 21 5.3E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup VP1233 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 52 65 5.3E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup VP1233 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 66 79 5.3E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup VP0580 8c4641eda80f5693cf2116e137c84833 203 PANTHER PTHR10681 1 196 3.1E-84 T 22-04-2016 VP0580 8c4641eda80f5693cf2116e137c84833 203 Gene3D G3DSA:3.40.30.10 3 193 1.6E-69 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0580 8c4641eda80f5693cf2116e137c84833 203 SUPERFAMILY SSF52833 1 194 5.48E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0580 8c4641eda80f5693cf2116e137c84833 203 PIRSF PIRSF000239 1 201 1.7E-58 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 VP0580 8c4641eda80f5693cf2116e137c84833 203 Pfam PF00578 AhpC/TSA family 4 139 7.8E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VP0580 8c4641eda80f5693cf2116e137c84833 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VP1910 4b7c11f503ce9980d03c24e4bcf7733c 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 3.6E-27 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VP1910 4b7c11f503ce9980d03c24e4bcf7733c 179 PANTHER PTHR35011 1 173 1.3E-92 T 22-04-2016 VP1910 4b7c11f503ce9980d03c24e4bcf7733c 179 PANTHER PTHR35011:SF4 1 173 1.3E-92 T 22-04-2016 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.3E-23 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 PANTHER PTHR30524:SF0 1 382 3.3E-198 T 22-04-2016 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 SUPERFAMILY SSF48179 205 382 1.84E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 PANTHER PTHR30524 1 382 3.3E-198 T 22-04-2016 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 1.6E-57 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.035 T 22-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 Gene3D G3DSA:1.10.1040.10 205 382 5.2E-48 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 SUPERFAMILY SSF51735 3 203 3.35E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VP0369 4f7e155eaceefc8ae02ee90192c8584a 382 Gene3D G3DSA:3.40.50.720 3 201 3.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2273 7e3764a795b4afb491a061ec63ba2b11 292 PANTHER PTHR12128 1 292 1.7E-142 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 PIRSF PIRSF001365 1 292 2.2E-97 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 Gene3D G3DSA:3.20.20.70 1 291 1.5E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 SUPERFAMILY SSF51569 2 290 3.87E-101 T 22-04-2016 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 1.4E-118 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 SMART SM01130 1 290 1.5E-142 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 PANTHER PTHR12128:SF34 1 292 1.7E-142 T 22-04-2016 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 6.1E-110 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.69 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 8.4E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 8.4E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 8.4E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP2273 7e3764a795b4afb491a061ec63ba2b11 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 8.4E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 Gene3D G3DSA:3.90.550.10 1 243 2.4E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 SUPERFAMILY SSF51161 252 434 1.14E-51 T 22-04-2016 IPR011004 Trimeric LpxA-like VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 Pfam PF12804 MobA-like NTP transferase domain 5 121 3.4E-22 T 22-04-2016 IPR025877 MobA-like NTP transferase VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.615 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 PANTHER PTHR22572:SF115 4 446 2.4E-225 T 22-04-2016 VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 Gene3D G3DSA:2.160.10.10 244 321 7.8E-20 T 22-04-2016 VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 2.7E-205 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 SUPERFAMILY SSF53448 1 249 2.5E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 PANTHER PTHR22572 4 446 2.4E-225 T 22-04-2016 VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 8.9E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 2.9E-4 T 22-04-2016 IPR001451 Hexapeptide repeat VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.6E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VP3067 9fd527e24b534d8bfeba16b801ba07bd 453 Gene3D G3DSA:2.160.10.10 322 451 6.7E-35 T 22-04-2016 VP0075 94f9217528520f07ca65a7072758c812 292 PANTHER PTHR22911 3 277 2.1E-60 T 22-04-2016 VP0075 94f9217528520f07ca65a7072758c812 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 4.0E-71 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VP0075 94f9217528520f07ca65a7072758c812 292 PANTHER PTHR22911:SF27 3 277 2.1E-60 T 22-04-2016 VP0075 94f9217528520f07ca65a7072758c812 292 Pfam PF00892 EamA-like transporter family 138 275 5.9E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VP0075 94f9217528520f07ca65a7072758c812 292 SUPERFAMILY SSF103481 35 131 3.4E-5 T 22-04-2016 VP0075 94f9217528520f07ca65a7072758c812 292 SUPERFAMILY SSF103481 184 276 1.57E-5 T 22-04-2016 VP0172 ede0acbd7e0c736b18c8afb80edb20db 608 Gene3D G3DSA:3.90.76.10 80 164 2.3E-19 T 22-04-2016 VP0172 ede0acbd7e0c736b18c8afb80edb20db 608 PIRSF PIRSF002741 1 563 8.3E-67 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VP0172 ede0acbd7e0c736b18c8afb80edb20db 608 Gene3D G3DSA:3.40.190.10 165 331 1.7E-13 T 22-04-2016 VP0172 ede0acbd7e0c736b18c8afb80edb20db 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 2.5E-55 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VP0172 ede0acbd7e0c736b18c8afb80edb20db 608 Gene3D G3DSA:3.10.105.10 332 535 1.3E-38 T 22-04-2016 VP0172 ede0acbd7e0c736b18c8afb80edb20db 608 SUPERFAMILY SSF53850 41 561 1.14E-93 T 22-04-2016 VP0172 ede0acbd7e0c736b18c8afb80edb20db 608 PANTHER PTHR30290 1 580 7.0E-62 T 22-04-2016 VP2301 d366d2497d663500fa9afe105f957969 438 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 1.2E-14 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VP2301 d366d2497d663500fa9afe105f957969 438 SMART SM00977 365 434 1.7E-21 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VP2301 d366d2497d663500fa9afe105f957969 438 Pfam PF01171 PP-loop family 21 199 3.8E-57 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VP2301 d366d2497d663500fa9afe105f957969 438 SUPERFAMILY SSF82829 236 318 5.36E-24 T 22-04-2016 VP2301 d366d2497d663500fa9afe105f957969 438 PANTHER PTHR11807:SF2 1 419 3.8E-87 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VP2301 d366d2497d663500fa9afe105f957969 438 SUPERFAMILY SSF52402 15 233 2.87E-61 T 22-04-2016 VP2301 d366d2497d663500fa9afe105f957969 438 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 1.3E-53 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VP2301 d366d2497d663500fa9afe105f957969 438 PANTHER PTHR11807 1 419 3.8E-87 T 22-04-2016 VP2301 d366d2497d663500fa9afe105f957969 438 Gene3D G3DSA:3.40.50.620 19 181 2.1E-14 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2301 d366d2497d663500fa9afe105f957969 438 Pfam PF09179 TilS substrate binding domain 248 315 1.0E-18 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VP2301 d366d2497d663500fa9afe105f957969 438 Pfam PF11734 TilS substrate C-terminal domain 365 435 2.0E-24 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VP2301 d366d2497d663500fa9afe105f957969 438 SUPERFAMILY SSF56037 322 436 5.49E-28 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VP2301 d366d2497d663500fa9afe105f957969 438 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 23.198 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VP0060 445e0419452ed44efe675a6161e42321 134 PANTHER PTHR30561 1 111 3.3E-29 T 22-04-2016 VP0060 445e0419452ed44efe675a6161e42321 134 Pfam PF00893 Small Multidrug Resistance protein 6 94 4.8E-19 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 VP0060 445e0419452ed44efe675a6161e42321 134 PANTHER PTHR30561:SF2 1 111 3.3E-29 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 VP0060 445e0419452ed44efe675a6161e42321 134 SUPERFAMILY SSF103481 6 108 2.75E-14 T 22-04-2016 VP0123 6805127b351bce9c60de0db9e64673c6 180 SUPERFAMILY SSF52540 3 171 3.75E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0123 6805127b351bce9c60de0db9e64673c6 180 Pfam PF13521 AAA domain 4 164 6.7E-40 T 22-04-2016 VP0123 6805127b351bce9c60de0db9e64673c6 180 Gene3D G3DSA:3.40.50.300 1 167 2.3E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0572 d49d82dbb9f3697bd536283374c34027 501 Gene3D G3DSA:1.10.3210.10 324 433 5.6E-4 T 22-04-2016 IPR006674 HD domain VP0572 d49d82dbb9f3697bd536283374c34027 501 Gene3D G3DSA:3.30.420.150 132 307 2.0E-52 T 22-04-2016 VP0572 d49d82dbb9f3697bd536283374c34027 501 SUPERFAMILY SSF53067 12 131 1.18E-35 T 22-04-2016 VP0572 d49d82dbb9f3697bd536283374c34027 501 PANTHER PTHR30005:SF4 6 501 9.2E-208 T 22-04-2016 VP0572 d49d82dbb9f3697bd536283374c34027 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 4.8E-86 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VP0572 d49d82dbb9f3697bd536283374c34027 501 PIRSF PIRSF001267 2 501 1.6E-201 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VP0572 d49d82dbb9f3697bd536283374c34027 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 4.8E-101 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VP0572 d49d82dbb9f3697bd536283374c34027 501 Gene3D G3DSA:3.30.420.40 6 131 1.1E-42 T 22-04-2016 VP0572 d49d82dbb9f3697bd536283374c34027 501 PANTHER PTHR30005 6 501 9.2E-208 T 22-04-2016 VP0572 d49d82dbb9f3697bd536283374c34027 501 SUPERFAMILY SSF53067 136 308 3.56E-46 T 22-04-2016 VP0572 d49d82dbb9f3697bd536283374c34027 501 SUPERFAMILY SSF109604 312 500 1.26E-47 T 22-04-2016 VP1014 2d480638f2e1b7421486320082fc30c8 756 SMART SM00382 490 657 6.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1014 2d480638f2e1b7421486320082fc30c8 756 SMART SM00382 209 354 3.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1014 2d480638f2e1b7421486320082fc30c8 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VP1014 2d480638f2e1b7421486320082fc30c8 756 SUPERFAMILY SSF52540 440 742 1.01E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1014 2d480638f2e1b7421486320082fc30c8 756 SMART SM01086 656 745 3.5E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP1014 2d480638f2e1b7421486320082fc30c8 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VP1014 2d480638f2e1b7421486320082fc30c8 756 PANTHER PTHR11638 1 755 0.0 T 22-04-2016 VP1014 2d480638f2e1b7421486320082fc30c8 756 PANTHER PTHR11638:SF111 1 755 0.0 T 22-04-2016 VP1014 2d480638f2e1b7421486320082fc30c8 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 8.9E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP1014 2d480638f2e1b7421486320082fc30c8 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 1.4E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP1014 2d480638f2e1b7421486320082fc30c8 756 SUPERFAMILY SSF52540 171 428 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1014 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:1.10.1780.10 1 142 4.6E-44 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP1014 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:3.40.50.300 445 665 6.8E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1014 2d480638f2e1b7421486320082fc30c8 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 1.7E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP1014 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:1.10.8.60 355 439 8.5E-31 T 22-04-2016 VP1014 2d480638f2e1b7421486320082fc30c8 756 SUPERFAMILY SSF81923 1 142 5.49E-59 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP1014 2d480638f2e1b7421486320082fc30c8 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP1014 2d480638f2e1b7421486320082fc30c8 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP1014 2d480638f2e1b7421486320082fc30c8 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP1014 2d480638f2e1b7421486320082fc30c8 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP1014 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:1.10.8.60 666 752 3.5E-30 T 22-04-2016 VP1014 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:3.40.50.300 172 352 1.9E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1014 2d480638f2e1b7421486320082fc30c8 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 VP1014 2d480638f2e1b7421486320082fc30c8 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 6.3E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP2066 ae28540f04acc0b7f0b08718271b4251 695 PANTHER PTHR30441 1 695 3.4E-195 T 22-04-2016 VP2066 ae28540f04acc0b7f0b08718271b4251 695 Pfam PF05170 AsmA family 1 585 1.8E-116 T 22-04-2016 IPR007844 AsmA VP2066 ae28540f04acc0b7f0b08718271b4251 695 PANTHER PTHR30441:SF4 1 695 3.4E-195 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 1520 1623 1.57E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 1276 1364 8.76E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 789 891 2.75E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 1155 1257 9.42E-7 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 423 526 4.71E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 667 769 5.62E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 911 1015 7.06E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 545 647 2.49E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 1398 1501 2.35E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2091 2109 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VP1630 4ea70963b6498a6d5e199d506a355153 2221 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2100 2118 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 301 405 4.05E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF51120 2072 2162 1.49E-13 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 1643 1751 1.44E-7 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 1388 1475 0.083 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 165 233 0.65 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 1266 1353 0.29 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 900 987 0.093 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 1144 1231 1.7 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 1632 1718 5.3 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 534 621 0.11 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 656 743 0.09 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 1022 1109 0.093 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 1510 1597 0.064 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 412 499 0.055 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 290 377 0.24 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 Pfam PF03160 Calx-beta domain 778 865 0.065 T 22-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 1033 1137 7.06E-8 T 22-04-2016 VP1630 4ea70963b6498a6d5e199d506a355153 2221 SUPERFAMILY SSF141072 159 283 6.8E-9 T 22-04-2016 VP2725 1540a67c2ec348fb5cf3b2f5f9393b65 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 7.5E-23 T 22-04-2016 IPR014318 Phage shock protein, PspG VP2725 1540a67c2ec348fb5cf3b2f5f9393b65 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 7.1E-24 T 22-04-2016 IPR014318 Phage shock protein, PspG VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 SMART SM01018 658 741 3.4E-45 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 SUPERFAMILY SSF82282 8 400 7.85E-120 T 22-04-2016 IPR003726 Homocysteine-binding domain VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Pfam PF00809 Pterin binding enzyme 361 599 2.0E-59 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 PANTHER PTHR21091:SF111 5 403 7.9E-173 T 22-04-2016 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Pfam PF02310 B12 binding domain 749 841 3.0E-18 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 7.8E-93 T 22-04-2016 IPR003726 Homocysteine-binding domain VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 SUPERFAMILY SSF56507 903 1225 7.85E-133 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Gene3D G3DSA:3.40.50.280 745 895 1.4E-66 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 SUPERFAMILY SSF52242 744 895 2.35E-46 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Pfam PF02607 B12 binding domain 660 734 4.3E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Gene3D G3DSA:3.20.20.330 4 364 1.1E-127 T 22-04-2016 IPR003726 Homocysteine-binding domain VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 SUPERFAMILY SSF51717 357 631 4.32E-88 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 PIRSF PIRSF000381 3 1197 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Gene3D G3DSA:1.10.1240.10 653 737 8.7E-39 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Gene3D G3DSA:3.10.196.10 959 1225 1.3E-108 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 PANTHER PTHR21091 5 403 7.9E-173 T 22-04-2016 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 SUPERFAMILY SSF47644 654 740 5.1E-29 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Gene3D G3DSA:3.20.20.20 365 636 4.8E-114 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VP2717 50de89429d5d19e56b2d68cc96f2a15b 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 6.7E-123 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VP1347 d38bf3ebc5ceab0bb5e3242e785cca11 536 Gene3D G3DSA:3.10.105.10 311 502 7.2E-53 T 22-04-2016 VP1347 d38bf3ebc5ceab0bb5e3242e785cca11 536 PANTHER PTHR30290 27 534 4.2E-162 T 22-04-2016 VP1347 d38bf3ebc5ceab0bb5e3242e785cca11 536 SUPERFAMILY SSF53850 33 529 4.34E-128 T 22-04-2016 VP1347 d38bf3ebc5ceab0bb5e3242e785cca11 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 6.0E-87 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VP1347 d38bf3ebc5ceab0bb5e3242e785cca11 536 PIRSF PIRSF002741 1 536 2.3E-104 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VP1347 d38bf3ebc5ceab0bb5e3242e785cca11 536 Gene3D G3DSA:3.40.190.10 214 310 3.6E-27 T 22-04-2016 VP1347 d38bf3ebc5ceab0bb5e3242e785cca11 536 Gene3D G3DSA:3.90.76.10 45 213 9.2E-49 T 22-04-2016 VP1347 d38bf3ebc5ceab0bb5e3242e785cca11 536 PANTHER PTHR30290:SF10 27 534 4.2E-162 T 22-04-2016 VP0871 d246a268a8ad40153ebe13141d048a33 388 Hamap MF_01899 Ribonuclease D [rnd]. 19 388 44.208 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VP0871 d246a268a8ad40153ebe13141d048a33 388 TIGRFAM TIGR01388 rnd: ribonuclease D 21 385 5.5E-148 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VP0871 d246a268a8ad40153ebe13141d048a33 388 SUPERFAMILY SSF53098 14 225 4.44E-71 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0871 d246a268a8ad40153ebe13141d048a33 388 PANTHER PTHR12124 17 363 1.8E-89 T 22-04-2016 VP0871 d246a268a8ad40153ebe13141d048a33 388 SUPERFAMILY SSF47819 312 387 6.21E-22 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VP0871 d246a268a8ad40153ebe13141d048a33 388 PANTHER PTHR12124:SF42 17 363 1.8E-89 T 22-04-2016 VP0871 d246a268a8ad40153ebe13141d048a33 388 Pfam PF00570 HRDC domain 229 295 1.1E-9 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VP0871 d246a268a8ad40153ebe13141d048a33 388 Pfam PF01612 3'-5' exonuclease 19 186 8.2E-42 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VP0871 d246a268a8ad40153ebe13141d048a33 388 SUPERFAMILY SSF47819 210 317 4.14E-24 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VP0871 d246a268a8ad40153ebe13141d048a33 388 Gene3D G3DSA:3.30.420.10 18 195 9.5E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0871 d246a268a8ad40153ebe13141d048a33 388 SMART SM00474 19 187 1.4E-43 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 PANTHER PTHR10174:SF2 48 336 1.6E-89 T 22-04-2016 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 SUPERFAMILY SSF51735 5 159 1.2E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.9E-129 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 5.2E-32 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 Gene3D G3DSA:3.40.50.720 1 144 1.5E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 PIRSF PIRSF000148 4 337 1.0E-134 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 SMART SM00859 6 121 2.7E-41 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 PANTHER PTHR10174 48 336 1.6E-89 T 22-04-2016 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 7.1E-62 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.451 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 Gene3D G3DSA:3.30.360.10 145 315 1.1E-81 T 22-04-2016 VP2192 ea77d6f35e6ec8a89bc2b8f1833614da 337 SUPERFAMILY SSF55347 131 320 1.07E-78 T 22-04-2016 VP0077 6a22e687223fbb2550c3ed7a27111f60 175 PANTHER PTHR11431 10 167 1.6E-46 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 VP0077 6a22e687223fbb2550c3ed7a27111f60 175 Pfam PF00210 Ferritin-like domain 8 143 1.2E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VP0077 6a22e687223fbb2550c3ed7a27111f60 175 SUPERFAMILY SSF47240 1 160 1.87E-58 T 22-04-2016 IPR009078 Ferritin-like superfamily VP0077 6a22e687223fbb2550c3ed7a27111f60 175 Gene3D G3DSA:1.20.1260.10 1 163 7.3E-63 T 22-04-2016 IPR012347 Ferritin-related VP1644 a449450d2be92b03ef710cd051b6a590 634 Gene3D G3DSA:3.40.50.980 252 411 1.7E-27 T 22-04-2016 VP1644 a449450d2be92b03ef710cd051b6a590 634 Gene3D G3DSA:3.40.50.980 76 251 5.3E-38 T 22-04-2016 VP1644 a449450d2be92b03ef710cd051b6a590 634 Gene3D G3DSA:2.30.38.10 426 504 3.7E-9 T 22-04-2016 VP1644 a449450d2be92b03ef710cd051b6a590 634 Pfam PF13193 AMP-binding enzyme C-terminal domain 519 598 3.1E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VP1644 a449450d2be92b03ef710cd051b6a590 634 ProSitePatterns PS00455 Putative AMP-binding domain signature. 246 257 - T 22-04-2016 IPR020845 AMP-binding, conserved site VP1644 a449450d2be92b03ef710cd051b6a590 634 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 13 65 1.2E-11 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VP1644 a449450d2be92b03ef710cd051b6a590 634 PANTHER PTHR24095 9 633 0.0 T 22-04-2016 VP1644 a449450d2be92b03ef710cd051b6a590 634 PANTHER PTHR24095:SF160 9 633 0.0 T 22-04-2016 VP1644 a449450d2be92b03ef710cd051b6a590 634 Gene3D G3DSA:3.30.300.30 506 632 6.0E-24 T 22-04-2016 VP1644 a449450d2be92b03ef710cd051b6a590 634 Pfam PF00501 AMP-binding enzyme 75 510 1.9E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP1644 a449450d2be92b03ef710cd051b6a590 634 SUPERFAMILY SSF56801 8 626 2.49E-156 T 22-04-2016 VPA0312 55b57c62ee52c59a820c14ab50b03b53 172 Pfam PF02441 Flavoprotein 2 110 5.6E-17 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VPA0312 55b57c62ee52c59a820c14ab50b03b53 172 PANTHER PTHR30108:SF2 44 172 7.3E-68 T 22-04-2016 VPA0312 55b57c62ee52c59a820c14ab50b03b53 172 PANTHER PTHR30108:SF2 1 27 7.3E-68 T 22-04-2016 VPA0312 55b57c62ee52c59a820c14ab50b03b53 172 PANTHER PTHR30108 44 172 7.3E-68 T 22-04-2016 VPA0312 55b57c62ee52c59a820c14ab50b03b53 172 Gene3D G3DSA:3.40.50.1950 1 170 1.0E-61 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VPA0312 55b57c62ee52c59a820c14ab50b03b53 172 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 47 167 7.7E-49 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VPA0312 55b57c62ee52c59a820c14ab50b03b53 172 PANTHER PTHR30108 1 27 7.3E-68 T 22-04-2016 VPA0312 55b57c62ee52c59a820c14ab50b03b53 172 SUPERFAMILY SSF52507 1 168 3.14E-46 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VP1152 a23038b05696780f277728671a0bdc16 212 Gene3D G3DSA:3.40.50.620 14 148 7.7E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1152 a23038b05696780f277728671a0bdc16 212 PANTHER PTHR30336 3 210 5.0E-69 T 22-04-2016 VP1152 a23038b05696780f277728671a0bdc16 212 Pfam PF02698 DUF218 domain 33 145 7.5E-23 T 22-04-2016 IPR003848 Domain of unknown function DUF218 VP1152 a23038b05696780f277728671a0bdc16 212 PANTHER PTHR30336:SF5 3 210 5.0E-69 T 22-04-2016 VP2094 136f722dee44ac8741fa7bbdd8c877cc 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.085 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 VP2094 136f722dee44ac8741fa7bbdd8c877cc 159 SUPERFAMILY SSF55040 11 155 1.96E-61 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VP2094 136f722dee44ac8741fa7bbdd8c877cc 159 Pfam PF01967 MoaC family 15 150 1.1E-55 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VP2094 136f722dee44ac8741fa7bbdd8c877cc 159 Gene3D G3DSA:3.30.70.640 3 158 4.4E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VP2094 136f722dee44ac8741fa7bbdd8c877cc 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.0E-72 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 VP2094 136f722dee44ac8741fa7bbdd8c877cc 159 PANTHER PTHR22960 1 158 1.2E-107 T 22-04-2016 VPA0120 94d62ec3881ea94e710800b35727657a 111 Gene3D G3DSA:1.10.150.20 70 110 5.2E-20 T 22-04-2016 VPA0120 94d62ec3881ea94e710800b35727657a 111 PANTHER PTHR10133 1 111 2.8E-53 T 22-04-2016 VPA0120 94d62ec3881ea94e710800b35727657a 111 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 72 110 1.4E-15 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VPA0120 94d62ec3881ea94e710800b35727657a 111 PANTHER PTHR10133:SF27 1 111 2.8E-53 T 22-04-2016 VPA0120 94d62ec3881ea94e710800b35727657a 111 SUPERFAMILY SSF88723 2 71 1.92E-24 T 22-04-2016 IPR029060 PIN domain-like VPA0120 94d62ec3881ea94e710800b35727657a 111 Gene3D G3DSA:3.40.50.1010 1 69 6.9E-25 T 22-04-2016 IPR029060 PIN domain-like VPA0120 94d62ec3881ea94e710800b35727657a 111 SUPERFAMILY SSF47807 71 110 3.89E-15 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VPA0120 94d62ec3881ea94e710800b35727657a 111 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 1 71 1.1E-19 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VPA0120 94d62ec3881ea94e710800b35727657a 111 SMART SM00279 74 109 1.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VPA0120 94d62ec3881ea94e710800b35727657a 111 SMART SM00475 1 111 7.0E-8 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VP2099 c97c344b7451b8469d04d5a6ac770081 453 PANTHER PTHR32071:SF33 1 453 1.3E-217 T 22-04-2016 VP2099 c97c344b7451b8469d04d5a6ac770081 453 Pfam PF02954 Bacterial regulatory protein, Fis family 404 444 4.5E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2099 c97c344b7451b8469d04d5a6ac770081 453 Gene3D G3DSA:1.10.8.60 306 378 1.3E-21 T 22-04-2016 VP2099 c97c344b7451b8469d04d5a6ac770081 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP2099 c97c344b7451b8469d04d5a6ac770081 453 Gene3D G3DSA:1.10.10.60 399 442 6.5E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2099 c97c344b7451b8469d04d5a6ac770081 453 Pfam PF00158 Sigma-54 interaction domain 134 299 3.0E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP2099 c97c344b7451b8469d04d5a6ac770081 453 SUPERFAMILY SSF52540 133 376 2.13E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2099 c97c344b7451b8469d04d5a6ac770081 453 Gene3D G3DSA:3.40.50.2300 1 121 2.8E-33 T 22-04-2016 VP2099 c97c344b7451b8469d04d5a6ac770081 453 SMART SM00448 1 108 6.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2099 c97c344b7451b8469d04d5a6ac770081 453 SUPERFAMILY SSF46689 346 443 8.96E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2099 c97c344b7451b8469d04d5a6ac770081 453 Pfam PF00072 Response regulator receiver domain 2 108 5.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2099 c97c344b7451b8469d04d5a6ac770081 453 PANTHER PTHR32071 1 453 1.3E-217 T 22-04-2016 VP2099 c97c344b7451b8469d04d5a6ac770081 453 Gene3D G3DSA:3.40.50.300 130 305 3.5E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2099 c97c344b7451b8469d04d5a6ac770081 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP2099 c97c344b7451b8469d04d5a6ac770081 453 SMART SM00382 153 296 5.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2099 c97c344b7451b8469d04d5a6ac770081 453 SUPERFAMILY SSF52172 2 177 2.28E-40 T 22-04-2016 IPR011006 CheY-like superfamily VP2621 ca8e6f1fdcace42c9a421c5397ee218b 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.085 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VP2621 ca8e6f1fdcace42c9a421c5397ee218b 200 PANTHER PTHR11067 1 194 5.4E-84 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VP2621 ca8e6f1fdcace42c9a421c5397ee218b 200 Pfam PF01725 Ham1 family 4 191 1.2E-56 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VP2621 ca8e6f1fdcace42c9a421c5397ee218b 200 Gene3D G3DSA:3.90.950.10 1 195 3.2E-82 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VP2621 ca8e6f1fdcace42c9a421c5397ee218b 200 SUPERFAMILY SSF52972 1 194 9.42E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VP2621 ca8e6f1fdcace42c9a421c5397ee218b 200 PANTHER PTHR11067:SF9 1 194 5.4E-84 T 22-04-2016 VP2621 ca8e6f1fdcace42c9a421c5397ee218b 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 4.8E-65 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VP2320 4ddb1863b60121da463cfb0438abb06c 874 SMART SM00471 447 594 2.1E-10 T 22-04-2016 IPR003607 HD/PDEase domain VP2320 4ddb1863b60121da463cfb0438abb06c 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 3.2E-35 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VP2320 4ddb1863b60121da463cfb0438abb06c 874 PANTHER PTHR13734 97 688 2.2E-146 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF55021 689 761 2.18E-8 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF55021 797 860 3.88E-10 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF81593 187 310 5.02E-9 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF109604 418 585 2.29E-12 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 Pfam PF01966 HD domain 452 584 1.3E-12 T 22-04-2016 IPR006674 HD domain VP2320 4ddb1863b60121da463cfb0438abb06c 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VP2320 4ddb1863b60121da463cfb0438abb06c 874 PANTHER PTHR13734:SF45 97 688 2.2E-146 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 Gene3D G3DSA:3.30.460.10 70 162 1.3E-9 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 Gene3D G3DSA:3.30.70.260 692 751 6.4E-4 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 Gene3D G3DSA:3.30.70.260 797 855 1.2E-9 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 PIRSF PIRSF006288 7 874 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VP2320 4ddb1863b60121da463cfb0438abb06c 874 Gene3D G3DSA:1.10.3210.10 421 610 3.1E-25 T 22-04-2016 IPR006674 HD domain VP2320 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF81301 35 171 8.45E-20 T 22-04-2016 VP2320 4ddb1863b60121da463cfb0438abb06c 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 334.265 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VP2320 4ddb1863b60121da463cfb0438abb06c 874 Pfam PF01842 ACT domain 802 849 6.5E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VP2320 4ddb1863b60121da463cfb0438abb06c 874 Pfam PF01909 Nucleotidyltransferase domain 57 111 1.4E-7 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 SUPERFAMILY SSF51971 117 360 4.59E-61 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 Gene3D G3DSA:1.10.1060.10 19 121 1.8E-23 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 Gene3D G3DSA:1.10.1060.10 446 546 5.1E-18 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 Gene3D G3DSA:3.50.50.60 209 359 4.0E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 PANTHER PTHR11938 21 422 2.1E-75 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 Gene3D G3DSA:3.40.50.720 360 432 4.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 Gene3D G3DSA:3.40.50.720 122 208 4.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 533 544 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 120 402 5.0E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 SUPERFAMILY SSF46548 409 552 2.88E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 PANTHER PTHR11938:SF99 21 422 2.1E-75 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 SUPERFAMILY SSF46548 15 129 6.28E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 19 106 2.3E-18 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 PRINTS PR00419 Adrenodoxin reductase family signature 143 156 4.7E-22 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 PRINTS PR00419 Adrenodoxin reductase family signature 120 142 4.7E-22 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 PRINTS PR00419 Adrenodoxin reductase family signature 185 195 4.7E-22 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 PRINTS PR00419 Adrenodoxin reductase family signature 286 299 4.7E-22 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 PRINTS PR00419 Adrenodoxin reductase family signature 252 266 4.7E-22 T 22-04-2016 VP1199 3d5c6aab574c64cc1f556320f29f49f8 598 Pfam PF13534 4Fe-4S dicluster domain 489 547 1.4E-5 T 22-04-2016 VP0180 5f1cbd9f27ce90d16adbe05d14b2ec63 196 SUPERFAMILY SSF48498 81 191 3.2E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VP0180 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Gene3D G3DSA:1.10.357.10 5 192 1.3E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VP0180 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.226 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VP0180 5f1cbd9f27ce90d16adbe05d14b2ec63 196 SUPERFAMILY SSF46689 5 78 1.99E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0180 5f1cbd9f27ce90d16adbe05d14b2ec63 196 PANTHER PTHR30055 6 191 3.7E-110 T 22-04-2016 VP0180 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 4.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP0180 5f1cbd9f27ce90d16adbe05d14b2ec63 196 PANTHER PTHR30055:SF58 6 191 3.7E-110 T 22-04-2016 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 Pfam PF02253 Phospholipase A1 36 266 7.0E-59 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 SUPERFAMILY SSF56931 30 268 8.76E-69 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 Gene3D G3DSA:2.40.230.10 35 268 1.5E-67 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 PANTHER PTHR40457 40 269 2.9E-50 T 22-04-2016 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 PRINTS PR01486 Bacterial phospholipase A1 protein signature 70 87 2.8E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 PRINTS PR01486 Bacterial phospholipase A1 protein signature 217 234 2.8E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 PRINTS PR01486 Bacterial phospholipase A1 protein signature 239 259 2.8E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 PRINTS PR01486 Bacterial phospholipase A1 protein signature 113 132 2.8E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VP1260 b5fe4272a310a5dc8d278fccd2658774 269 PRINTS PR01486 Bacterial phospholipase A1 protein signature 184 202 2.8E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VP2005 7302a5ffb1509fd2fecddea799d4fffa 171 PANTHER PTHR10681 11 167 2.8E-16 T 22-04-2016 VP2005 7302a5ffb1509fd2fecddea799d4fffa 171 Pfam PF00085 Thioredoxin 52 157 8.1E-12 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 VP2005 7302a5ffb1509fd2fecddea799d4fffa 171 Gene3D G3DSA:3.40.30.10 13 159 4.1E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2005 7302a5ffb1509fd2fecddea799d4fffa 171 SUPERFAMILY SSF52833 42 161 6.49E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2005 7302a5ffb1509fd2fecddea799d4fffa 171 PANTHER PTHR10681:SF106 11 167 2.8E-16 T 22-04-2016 VP2005 7302a5ffb1509fd2fecddea799d4fffa 171 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VP2767 824cf05326eb4126af8b8f4fbb294164 425 SUPERFAMILY SSF51735 173 420 5.12E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2767 824cf05326eb4126af8b8f4fbb294164 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 365 2.3E-25 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VP2767 824cf05326eb4126af8b8f4fbb294164 425 PANTHER PTHR23406 44 425 1.5E-164 T 22-04-2016 VP2767 824cf05326eb4126af8b8f4fbb294164 425 SUPERFAMILY SSF53223 20 171 2.45E-52 T 22-04-2016 VP2767 824cf05326eb4126af8b8f4fbb294164 425 Pfam PF00390 Malic enzyme, N-terminal domain 31 160 7.2E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VP2767 824cf05326eb4126af8b8f4fbb294164 425 Gene3D G3DSA:3.40.50.10380 16 170 1.6E-49 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VP2767 824cf05326eb4126af8b8f4fbb294164 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VP2767 824cf05326eb4126af8b8f4fbb294164 425 PIRSF PIRSF000106 49 425 2.3E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VP2767 824cf05326eb4126af8b8f4fbb294164 425 SMART SM01274 28 161 6.0E-75 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VP2767 824cf05326eb4126af8b8f4fbb294164 425 Gene3D G3DSA:3.40.50.720 171 422 9.7E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2767 824cf05326eb4126af8b8f4fbb294164 425 SMART SM00919 173 409 1.0E-142 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VP1221 aee787de2662fccd3001e187e4468114 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 128 202 5.2E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1221 aee787de2662fccd3001e187e4468114 207 PANTHER PTHR33751 12 205 2.9E-15 T 22-04-2016 VP1221 aee787de2662fccd3001e187e4468114 207 SUPERFAMILY SSF46626 37 115 4.72E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1221 aee787de2662fccd3001e187e4468114 207 SUPERFAMILY SSF46626 122 205 1.06E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1221 aee787de2662fccd3001e187e4468114 207 Gene3D G3DSA:1.10.760.10 119 205 7.7E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1221 aee787de2662fccd3001e187e4468114 207 Gene3D G3DSA:1.10.760.10 20 115 1.9E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1221 aee787de2662fccd3001e187e4468114 207 PIRSF PIRSF000005 1 207 1.4E-30 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VP1221 aee787de2662fccd3001e187e4468114 207 PANTHER PTHR33751:SF3 12 205 2.9E-15 T 22-04-2016 VP0920 84db6800118b3f1188e01ec53ac1d371 90 SUPERFAMILY SSF47729 1 90 3.39E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VP0920 84db6800118b3f1188e01ec53ac1d371 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.8E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP0920 84db6800118b3f1188e01ec53ac1d371 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VP0920 84db6800118b3f1188e01ec53ac1d371 90 Gene3D G3DSA:4.10.520.10 1 90 2.7E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VP0920 84db6800118b3f1188e01ec53ac1d371 90 SMART SM00411 1 90 4.1E-44 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP0920 84db6800118b3f1188e01ec53ac1d371 90 PANTHER PTHR33175 1 90 1.3E-45 T 22-04-2016 VP0920 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP0920 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP0920 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2759 609a54f350b3270f495ffee54ff98f08 334 PANTHER PTHR32338 1 334 1.1E-149 T 22-04-2016 VP2759 609a54f350b3270f495ffee54ff98f08 334 Gene3D G3DSA:3.30.360.10 163 308 5.6E-50 T 22-04-2016 VP2759 609a54f350b3270f495ffee54ff98f08 334 SMART SM00859 3 146 3.7E-45 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VP2759 609a54f350b3270f495ffee54ff98f08 334 SUPERFAMILY SSF55347 154 308 1.83E-50 T 22-04-2016 VP2759 609a54f350b3270f495ffee54ff98f08 334 SUPERFAMILY SSF51735 1 167 2.06E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2759 609a54f350b3270f495ffee54ff98f08 334 Gene3D G3DSA:3.40.50.720 1 162 9.0E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2759 609a54f350b3270f495ffee54ff98f08 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2759 609a54f350b3270f495ffee54ff98f08 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 146 7.7E-33 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VP2759 609a54f350b3270f495ffee54ff98f08 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.174 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2759 609a54f350b3270f495ffee54ff98f08 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 165 311 1.5E-14 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2759 609a54f350b3270f495ffee54ff98f08 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 4.0E-119 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2511 eb88ad8db514a065418b3ce47b439fa6 305 Gene3D G3DSA:3.40.50.300 3 226 1.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2511 eb88ad8db514a065418b3ce47b439fa6 305 PANTHER PTHR24220 5 302 2.0E-174 T 22-04-2016 VP2511 eb88ad8db514a065418b3ce47b439fa6 305 Pfam PF00005 ABC transporter 20 164 6.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2511 eb88ad8db514a065418b3ce47b439fa6 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2511 eb88ad8db514a065418b3ce47b439fa6 305 SMART SM00382 29 213 2.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2511 eb88ad8db514a065418b3ce47b439fa6 305 PANTHER PTHR24220:SF305 5 302 2.0E-174 T 22-04-2016 VP2511 eb88ad8db514a065418b3ce47b439fa6 305 SUPERFAMILY SSF52540 3 231 1.78E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2925 af7841816b85fbe93c955c9bc0544a50 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 4.1E-106 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VP2925 af7841816b85fbe93c955c9bc0544a50 233 SUPERFAMILY SSF56808 6 225 1.96E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like VP2925 af7841816b85fbe93c955c9bc0544a50 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site VP2925 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.40.50.790 69 159 8.0E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VP2925 af7841816b85fbe93c955c9bc0544a50 233 PIRSF PIRSF002155 1 227 4.9E-79 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 VP2925 af7841816b85fbe93c955c9bc0544a50 233 PANTHER PTHR23105 19 232 2.1E-81 T 22-04-2016 VP2925 af7841816b85fbe93c955c9bc0544a50 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.2E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VP2925 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.30.190.20 18 68 1.5E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VP2925 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.30.190.20 161 225 1.5E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VP2925 af7841816b85fbe93c955c9bc0544a50 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.018 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VP2925 af7841816b85fbe93c955c9bc0544a50 233 PANTHER PTHR23105:SF5 19 232 2.1E-81 T 22-04-2016 VP0812 4ab690b43a97d511e5cb63f08730bd78 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 1.2E-70 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 VP2772 22b181e49096b7a6182d907e0a8aa392 156 SUPERFAMILY SSF47973 6 149 5.36E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VP2772 22b181e49096b7a6182d907e0a8aa392 156 PIRSF PIRSF002122 3 156 2.0E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VP2772 22b181e49096b7a6182d907e0a8aa392 156 Gene3D G3DSA:1.10.455.10 8 156 4.1E-69 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VP2772 22b181e49096b7a6182d907e0a8aa392 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.4E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VP2772 22b181e49096b7a6182d907e0a8aa392 156 PANTHER PTHR11205 1 156 2.2E-93 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VP2772 22b181e49096b7a6182d907e0a8aa392 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.2E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VP2772 22b181e49096b7a6182d907e0a8aa392 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.04 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VP2772 22b181e49096b7a6182d907e0a8aa392 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 9.1E-120 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 Gene3D G3DSA:3.40.50.720 2 160 1.0E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 4.2E-59 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 SMART SM00846 3 152 2.9E-73 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 SUPERFAMILY SSF55347 152 314 2.59E-63 T 22-04-2016 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 PANTHER PTHR10836 1 330 1.1E-225 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.14E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.14E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.14E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.14E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.14E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 PIRSF PIRSF000149 1 331 3.6E-116 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 Gene3D G3DSA:3.30.360.10 161 315 1.5E-66 T 22-04-2016 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 1.1E-51 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 PANTHER PTHR10836:SF37 1 330 1.1E-225 T 22-04-2016 VP2970 8452e82652fac87fcc106ee6c2ba87e5 333 SUPERFAMILY SSF51735 1 173 8.67E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VP3068 d4430f5877f40eb138da9c8be891b659 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.795 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3068 d4430f5877f40eb138da9c8be891b659 140 Gene3D G3DSA:1.20.5.440 93 135 6.4E-23 T 22-04-2016 VP3068 d4430f5877f40eb138da9c8be891b659 140 SUPERFAMILY SSF46604 89 138 1.96E-14 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VP3068 d4430f5877f40eb138da9c8be891b659 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 8.8E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3068 d4430f5877f40eb138da9c8be891b659 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 8.0E-41 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3068 d4430f5877f40eb138da9c8be891b659 140 PANTHER PTHR13822 1 140 4.2E-46 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3068 d4430f5877f40eb138da9c8be891b659 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 5.2E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VP3068 d4430f5877f40eb138da9c8be891b659 140 SUPERFAMILY SSF51344 5 87 3.79E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3068 d4430f5877f40eb138da9c8be891b659 140 Gene3D G3DSA:2.60.15.10 5 92 2.6E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP3068 d4430f5877f40eb138da9c8be891b659 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 7.3E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VP2584 f2574ed2f34cf1882050d927e95bc08e 170 SUPERFAMILY SSF55826 18 169 3.53E-39 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2584 f2574ed2f34cf1882050d927e95bc08e 170 PANTHER PTHR30411 12 170 1.2E-26 T 22-04-2016 VP2584 f2574ed2f34cf1882050d927e95bc08e 170 Pfam PF04073 Aminoacyl-tRNA editing domain 40 160 6.3E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2584 f2574ed2f34cf1882050d927e95bc08e 170 Gene3D G3DSA:3.90.960.10 15 170 2.9E-42 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PANTHER PTHR13697 2 306 1.6E-133 T 22-04-2016 VP2855 9fb7805253f42f75dd18b140cf62180b 320 SUPERFAMILY SSF53784 3 310 4.45E-112 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 Gene3D G3DSA:3.40.50.450 2 215 9.9E-75 T 22-04-2016 VP2855 9fb7805253f42f75dd18b140cf62180b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.319 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PANTHER PTHR13697:SF4 2 306 1.6E-133 T 22-04-2016 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PIRSF PIRSF000532 1 320 1.0E-126 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 Pfam PF00365 Phosphofructokinase 4 276 2.6E-108 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.1E-129 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP2855 9fb7805253f42f75dd18b140cf62180b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VP1629 9c10a02448f18b598b35e700c184a73f 418 SUPERFAMILY SSF88697 25 94 4.05E-17 T 22-04-2016 IPR015947 PUA-like domain VP1629 9c10a02448f18b598b35e700c184a73f 418 PANTHER PTHR11061 24 418 3.5E-122 T 22-04-2016 VP1629 9c10a02448f18b598b35e700c184a73f 418 SUPERFAMILY SSF53335 99 414 3.94E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1629 9c10a02448f18b598b35e700c184a73f 418 SMART SM00359 24 108 1.2E-13 T 22-04-2016 IPR002478 PUA domain GO:0003723 VP1629 9c10a02448f18b598b35e700c184a73f 418 Gene3D G3DSA:3.40.50.150 203 417 6.4E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1629 9c10a02448f18b598b35e700c184a73f 418 Gene3D G3DSA:2.30.130.10 25 93 2.7E-27 T 22-04-2016 IPR015947 PUA-like domain VP1629 9c10a02448f18b598b35e700c184a73f 418 Gene3D G3DSA:3.30.750.80 94 200 1.1E-36 T 22-04-2016 VP1629 9c10a02448f18b598b35e700c184a73f 418 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 22 418 68.589 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP1629 9c10a02448f18b598b35e700c184a73f 418 PANTHER PTHR11061:SF12 24 418 3.5E-122 T 22-04-2016 VP1629 9c10a02448f18b598b35e700c184a73f 418 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 190 397 7.5E-31 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VP0593 71691356ad3829fdbd4ca21926c02b22 267 SUPERFAMILY SSF56655 1 259 1.2E-83 T 22-04-2016 VP0593 71691356ad3829fdbd4ca21926c02b22 267 Pfam PF00459 Inositol monophosphatase family 2 254 3.9E-69 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PANTHER PTHR20854:SF4 1 260 6.3E-105 T 22-04-2016 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PANTHER PTHR20854 1 260 6.3E-105 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 Gene3D G3DSA:3.40.190.80 152 259 9.6E-39 T 22-04-2016 VP0593 71691356ad3829fdbd4ca21926c02b22 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 Gene3D G3DSA:3.30.540.10 2 151 3.7E-51 T 22-04-2016 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.7E-35 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.7E-35 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.7E-35 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.7E-35 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VP0593 71691356ad3829fdbd4ca21926c02b22 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 Gene3D G3DSA:2.40.50.140 5 69 3.0E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 SMART SM00357 6 70 1.3E-25 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 28 37 3.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 7 22 3.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 43 61 3.8E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 PIRSF PIRSF002599 1 70 1.3E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 PANTHER PTHR11544 1 70 8.3E-31 T 22-04-2016 VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 PANTHER PTHR11544:SF63 1 70 8.3E-31 T 22-04-2016 VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 SUPERFAMILY SSF50249 4 69 1.09E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1889 98a2038dbbd1cf8d88d3d8207f720445 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 5.1E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP0259 b31e1053967a7de8f847d99ce8f56d74 100 PANTHER PTHR11620 9 95 1.5E-35 T 22-04-2016 VP0259 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site VP0259 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0259 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 6 98 8.0E-36 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VP0259 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VP0259 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VP1923 1f2eb5bd58bee6b0d06eb3033624df6e 136 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 8 135 6.2E-49 T 22-04-2016 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF VP1923 1f2eb5bd58bee6b0d06eb3033624df6e 136 PANTHER PTHR30009 28 135 8.2E-40 T 22-04-2016 VP1923 1f2eb5bd58bee6b0d06eb3033624df6e 136 PANTHER PTHR30009:SF6 28 135 8.2E-40 T 22-04-2016 VP1923 1f2eb5bd58bee6b0d06eb3033624df6e 136 Pfam PF03918 Cytochrome C biogenesis protein 28 135 6.2E-42 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family VP2952 961638fee02b3016af48334c87e46ba4 106 Gene3D G3DSA:3.40.250.10 2 104 2.4E-29 T 22-04-2016 IPR001763 Rhodanese-like domain VP2952 961638fee02b3016af48334c87e46ba4 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.203 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 VP2952 961638fee02b3016af48334c87e46ba4 106 PANTHER PTHR12231 23 105 2.4E-14 T 22-04-2016 VP2952 961638fee02b3016af48334c87e46ba4 106 SUPERFAMILY SSF52821 1 105 2.36E-29 T 22-04-2016 IPR001763 Rhodanese-like domain VP2952 961638fee02b3016af48334c87e46ba4 106 SMART SM00450 7 102 9.6E-19 T 22-04-2016 IPR001763 Rhodanese-like domain VP2952 961638fee02b3016af48334c87e46ba4 106 Pfam PF00581 Rhodanese-like domain 13 98 9.5E-12 T 22-04-2016 IPR001763 Rhodanese-like domain VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 9.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 9.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 9.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Gene3D G3DSA:3.30.565.10 417 601 6.6E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 PANTHER PTHR22617 1 152 4.0E-270 T 22-04-2016 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 PANTHER PTHR22617 187 737 4.0E-270 T 22-04-2016 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 601 2.4E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 PANTHER PTHR22617:SF6 1 152 4.0E-270 T 22-04-2016 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 PANTHER PTHR22617:SF6 187 737 4.0E-270 T 22-04-2016 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 SMART SM00073 6 103 3.3E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 SUPERFAMILY SSF50341 601 735 2.88E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 SMART SM01231 354 414 3.2E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Gene3D G3DSA:1.10.287.560 355 415 1.9E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Gene3D G3DSA:1.20.120.160 4 141 1.8E-42 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Gene3D G3DSA:2.40.50.180 626 690 8.4E-12 T 22-04-2016 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Pfam PF01584 CheW-like domain 608 737 1.8E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 SMART SM00260 594 735 4.6E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 SUPERFAMILY SSF55874 417 600 5.11E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 355 414 5.1E-12 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 SMART SM00387 459 602 1.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 SUPERFAMILY SSF47384 356 415 7.45E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 SUPERFAMILY SSF47226 6 129 3.53E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Gene3D G3DSA:2.30.30.40 691 735 1.6E-21 T 22-04-2016 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Gene3D G3DSA:2.30.30.40 602 623 1.6E-21 T 22-04-2016 VP2229 cdab0ecc5348bc83c80432eeb12cf8f1 744 Pfam PF01627 Hpt domain 8 100 6.5E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 Pfam PF00175 Oxidoreductase NAD-binding domain 126 233 8.6E-13 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 Gene3D G3DSA:3.10.20.30 249 349 1.3E-25 T 22-04-2016 IPR012675 Beta-grasp domain VP1188 d45237ac7bc0beb836595fac5859bc4f 351 SUPERFAMILY SSF52343 118 253 2.1E-31 T 22-04-2016 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 PANTHER PTHR19370:SF89 10 271 7.2E-66 T 22-04-2016 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 SUPERFAMILY SSF63380 4 110 2.79E-27 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 Gene3D G3DSA:3.40.50.80 119 248 2.6E-31 T 22-04-2016 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 Gene3D G3DSA:2.40.30.10 4 107 4.4E-25 T 22-04-2016 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 275 341 1.7E-11 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 1.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 1.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 Pfam PF00970 Oxidoreductase FAD-binding domain 17 108 3.0E-16 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VP1188 d45237ac7bc0beb836595fac5859bc4f 351 SUPERFAMILY SSF54292 242 350 1.02E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VP1188 d45237ac7bc0beb836595fac5859bc4f 351 PANTHER PTHR19370 10 271 7.2E-66 T 22-04-2016 VP2639 bd8bac133074d52c639bf04241b18ee5 221 Gene3D G3DSA:3.40.50.720 2 205 1.8E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2639 bd8bac133074d52c639bf04241b18ee5 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 3.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2639 bd8bac133074d52c639bf04241b18ee5 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 3.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2639 bd8bac133074d52c639bf04241b18ee5 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 3.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2639 bd8bac133074d52c639bf04241b18ee5 221 PANTHER PTHR24322 141 172 1.5E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2639 bd8bac133074d52c639bf04241b18ee5 221 PANTHER PTHR24322 4 122 1.5E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2639 bd8bac133074d52c639bf04241b18ee5 221 SUPERFAMILY SSF51735 2 207 1.25E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2639 bd8bac133074d52c639bf04241b18ee5 221 Pfam PF00106 short chain dehydrogenase 2 182 9.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2639 bd8bac133074d52c639bf04241b18ee5 221 PANTHER PTHR24322:SF57 141 172 1.5E-30 T 22-04-2016 VP2639 bd8bac133074d52c639bf04241b18ee5 221 PANTHER PTHR24322:SF57 4 122 1.5E-30 T 22-04-2016 VP1157 9af22c491775b0f0c633e43a12f5e55b 286 PANTHER PTHR30520 1 227 5.1E-99 T 22-04-2016 VP1157 9af22c491775b0f0c633e43a12f5e55b 286 PANTHER PTHR30520 244 279 5.1E-99 T 22-04-2016 VP1157 9af22c491775b0f0c633e43a12f5e55b 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 4.6E-77 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VP1157 9af22c491775b0f0c633e43a12f5e55b 286 Gene3D G3DSA:1.20.1080.10 29 279 9.8E-86 T 22-04-2016 IPR023271 Aquaporin-like VP1157 9af22c491775b0f0c633e43a12f5e55b 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 1.4E-112 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VP1157 9af22c491775b0f0c633e43a12f5e55b 286 PANTHER PTHR30520:SF4 1 227 5.1E-99 T 22-04-2016 VP1157 9af22c491775b0f0c633e43a12f5e55b 286 PANTHER PTHR30520:SF4 244 279 5.1E-99 T 22-04-2016 VP1157 9af22c491775b0f0c633e43a12f5e55b 286 Pfam PF01226 Formate/nitrite transporter 14 275 1.3E-73 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VP1157 9af22c491775b0f0c633e43a12f5e55b 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 PIRSF PIRSF001434 1 391 4.2E-125 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 4.1E-172 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 PANTHER PTHR11808 1 392 3.7E-267 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 SUPERFAMILY SSF53383 22 387 2.18E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 PANTHER PTHR11808:SF45 1 392 3.7E-267 T 22-04-2016 VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 Gene3D G3DSA:3.90.1150.10 256 387 3.2E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 Gene3D G3DSA:3.40.640.10 6 255 1.8E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1182 3b2b8017af72bba23c3a7aaae039b0f9 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 1.8E-117 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP0402 5eb6c98f268ca3b02325c69f74eb8b50 473 Pfam PF13657 HipA N-terminal domain 12 111 1.1E-16 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 VP0402 5eb6c98f268ca3b02325c69f74eb8b50 473 Pfam PF07804 HipA-like C-terminal domain 241 425 7.0E-22 T 22-04-2016 IPR012893 HipA-like, C-terminal VP0402 5eb6c98f268ca3b02325c69f74eb8b50 473 Pfam PF07805 HipA-like N-terminal domain 151 230 1.3E-18 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 VP0402 5eb6c98f268ca3b02325c69f74eb8b50 473 PANTHER PTHR37419 2 337 2.1E-59 T 22-04-2016 VP0402 5eb6c98f268ca3b02325c69f74eb8b50 473 PANTHER PTHR37419:SF3 2 337 2.1E-59 T 22-04-2016 VP0402 5eb6c98f268ca3b02325c69f74eb8b50 473 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 30 110 2.5E-12 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 Gene3D G3DSA:2.150.10.10 3015 3189 1.1E-23 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 SUPERFAMILY SSF141072 2186 2291 2.35E-7 T 22-04-2016 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 SUPERFAMILY SSF51120 3016 3178 3.01E-24 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 Pfam PF05345 Putative Ig domain 2631 2698 2.9E-10 T 22-04-2016 IPR008009 Putative Ig VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 PRINTS PR00313 NodO calcium binding signature 3119 3127 7.0E-7 T 22-04-2016 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 PRINTS PR00313 NodO calcium binding signature 3110 3118 7.0E-7 T 22-04-2016 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 PRINTS PR00313 NodO calcium binding signature 3128 3137 7.0E-7 T 22-04-2016 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 PRINTS PR00313 NodO calcium binding signature 3089 3100 7.0E-7 T 22-04-2016 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 Pfam PF13519 von Willebrand factor type A domain 2756 2869 3.6E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3115 3133 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 SMART SM00327 2753 2926 5.8E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 SMART SM00736 820 912 0.042 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 SMART SM00736 1685 1778 0.057 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 SMART SM00736 1095 1190 0.046 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 SMART SM00736 545 637 0.019 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 SUPERFAMILY SSF53300 2715 2872 8.74E-19 T 22-04-2016 IPR002035 von Willebrand factor, type A VP1633 0dc2df2cc26574b3c853e4d006a5d8d1 3240 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3097 3115 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 Hamap MF_00970 Ribonuclease E [rne]. 1 1010 35.895 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 PANTHER PTHR30001 1 824 0.0 T 22-04-2016 VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 Gene3D G3DSA:2.40.50.140 31 124 4.8E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 PANTHER PTHR30001:SF1 1 824 0.0 T 22-04-2016 VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 Pfam PF10150 Ribonuclease E/G family 121 390 7.1E-95 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 SUPERFAMILY SSF50249 40 124 3.97E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 SMART SM00316 37 119 1.1E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.2E-171 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VP2062 4197f06df44193e2e1cbcaa1ffd16a47 1023 Pfam PF00575 S1 RNA binding domain 37 118 4.9E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP0654 e6230cf9c56c805cff3c435fda177dba 381 PANTHER PTHR24078 1 352 4.1E-173 T 22-04-2016 VP0654 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF46565 1 113 5.23E-36 T 22-04-2016 IPR001623 DnaJ domain VP0654 e6230cf9c56c805cff3c435fda177dba 381 SMART SM00271 4 62 5.4E-31 T 22-04-2016 IPR001623 DnaJ domain VP0654 e6230cf9c56c805cff3c435fda177dba 381 PANTHER PTHR24078:SF231 1 352 4.1E-173 T 22-04-2016 VP0654 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 261 346 7.85E-23 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VP0654 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF00684 DnaJ central domain 149 209 3.8E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VP0654 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF00226 DnaJ domain 5 67 6.5E-27 T 22-04-2016 IPR001623 DnaJ domain VP0654 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 188 265 1.05E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VP0654 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 115 140 1.05E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VP0654 e6230cf9c56c805cff3c435fda177dba 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.922 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VP0654 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.60.260.20 258 335 6.4E-23 T 22-04-2016 VP0654 e6230cf9c56c805cff3c435fda177dba 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site VP0654 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 42 62 3.7E-32 T 22-04-2016 IPR001623 DnaJ domain VP0654 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 7 25 3.7E-32 T 22-04-2016 IPR001623 DnaJ domain VP0654 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 25 40 3.7E-32 T 22-04-2016 IPR001623 DnaJ domain VP0654 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 62 81 3.7E-32 T 22-04-2016 IPR001623 DnaJ domain VP0654 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF01556 DnaJ C terminal domain 123 335 2.1E-45 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal VP0654 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.60.260.20 213 256 3.0E-22 T 22-04-2016 VP0654 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.60.260.20 110 142 3.0E-22 T 22-04-2016 VP0654 e6230cf9c56c805cff3c435fda177dba 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.1E-140 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VP0654 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF57938 136 212 3.01E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VP0654 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:1.10.287.110 1 104 1.5E-36 T 22-04-2016 IPR001623 DnaJ domain VP0654 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.10.230.10 143 212 3.4E-25 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VP2989 5733b8b9e286196c27a882f826485236 242 Gene3D G3DSA:3.40.50.10090 30 142 2.1E-15 T 22-04-2016 VP2989 5733b8b9e286196c27a882f826485236 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 236 3.0E-31 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2989 5733b8b9e286196c27a882f826485236 242 SUPERFAMILY SSF69618 1 241 1.7E-50 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2989 5733b8b9e286196c27a882f826485236 242 Gene3D G3DSA:3.40.50.10090 143 241 7.1E-4 T 22-04-2016 VP2989 5733b8b9e286196c27a882f826485236 242 PANTHER PTHR38042:SF1 1 242 1.6E-62 T 22-04-2016 VP2989 5733b8b9e286196c27a882f826485236 242 PANTHER PTHR38042 1 242 1.6E-62 T 22-04-2016 VP0282 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP0282 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0282 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 53 3.53E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0282 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 180 234 3.53E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0282 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0282 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.1E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP0282 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 245 329 7.2E-38 T 22-04-2016 VP0282 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0282 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP0282 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 22-04-2016 VP0282 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:2.170.120.12 58 178 7.8E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP0282 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 5.6E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0282 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0282 a9404b47b70ea5a99645541fc9be0819 330 PANTHER PTHR32108 1 330 6.0E-154 T 22-04-2016 VP0282 a9404b47b70ea5a99645541fc9be0819 330 PANTHER PTHR32108:SF0 1 330 6.0E-154 T 22-04-2016 VP0282 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 9 57 1.7E-10 T 22-04-2016 VP0958 45b41599a35a13cf00b5c5ba9d39c373 139 SMART SM00116 13 61 0.032 T 22-04-2016 IPR000644 CBS domain VP0958 45b41599a35a13cf00b5c5ba9d39c373 139 SMART SM00116 80 128 3.4E-9 T 22-04-2016 IPR000644 CBS domain VP0958 45b41599a35a13cf00b5c5ba9d39c373 139 SUPERFAMILY SSF54631 1 127 1.39E-31 T 22-04-2016 VP0958 45b41599a35a13cf00b5c5ba9d39c373 139 Pfam PF00571 CBS domain 6 61 4.3E-7 T 22-04-2016 IPR000644 CBS domain VP0958 45b41599a35a13cf00b5c5ba9d39c373 139 Pfam PF00571 CBS domain 73 127 1.6E-13 T 22-04-2016 IPR000644 CBS domain VP0958 45b41599a35a13cf00b5c5ba9d39c373 139 Gene3D G3DSA:3.10.580.10 1 133 3.4E-31 T 22-04-2016 VP0958 45b41599a35a13cf00b5c5ba9d39c373 139 PANTHER PTHR11911 1 127 3.3E-21 T 22-04-2016 VPA0172 72980671aee76e1096bf6ce5b3f90dea 142 Pfam PF00271 Helicase conserved C-terminal domain 1 62 1.4E-13 T 22-04-2016 IPR001650 Helicase, C-terminal VPA0172 72980671aee76e1096bf6ce5b3f90dea 142 Gene3D G3DSA:3.40.50.300 1 112 1.0E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0172 72980671aee76e1096bf6ce5b3f90dea 142 SUPERFAMILY SSF52540 1 128 6.19E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0172 72980671aee76e1096bf6ce5b3f90dea 142 SMART SM00490 1 63 1.4E-4 T 22-04-2016 IPR001650 Helicase, C-terminal VPA0172 72980671aee76e1096bf6ce5b3f90dea 142 PANTHER PTHR14025:SF21 1 116 4.2E-41 T 22-04-2016 VPA0172 72980671aee76e1096bf6ce5b3f90dea 142 PANTHER PTHR14025 1 116 4.2E-41 T 22-04-2016 VP2558 d28c37bdf883460d6f65223cd48fae4d 158 Pfam PF02542 YgbB family 2 155 2.1E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2558 d28c37bdf883460d6f65223cd48fae4d 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.984 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2558 d28c37bdf883460d6f65223cd48fae4d 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.6E-68 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2558 d28c37bdf883460d6f65223cd48fae4d 158 PANTHER PTHR32125 1 155 2.3E-57 T 22-04-2016 VP2558 d28c37bdf883460d6f65223cd48fae4d 158 Gene3D G3DSA:3.30.1330.50 1 157 8.7E-72 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2558 d28c37bdf883460d6f65223cd48fae4d 158 SUPERFAMILY SSF69765 1 157 1.07E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2558 d28c37bdf883460d6f65223cd48fae4d 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 514 533 5.8E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 422 437 5.8E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 388 407 5.8E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 204 221 5.8E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 304 324 5.8E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 PANTHER PTHR30332 28 605 4.8E-174 T 22-04-2016 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 PANTHER PTHR30332:SF5 28 605 4.8E-174 T 22-04-2016 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 Pfam PF00263 Bacterial type II and III secretion system protein 375 535 2.5E-36 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 481 514 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 44 536 8.3E-150 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VP1696 f0b61a59f1775359661b6204f8fe62b3 632 Pfam PF03958 Bacterial type II/III secretion system short domain 192 301 3.5E-15 T 22-04-2016 IPR005644 NolW-like VP2153 0069fe2006549ef00f02e9c1db61053e 337 PIRSF PIRSF500176 2 333 2.8E-108 T 22-04-2016 VP2153 0069fe2006549ef00f02e9c1db61053e 337 PANTHER PTHR11707:SF31 1 336 7.9E-249 T 22-04-2016 VP2153 0069fe2006549ef00f02e9c1db61053e 337 SMART SM00870 5 324 1.9E-139 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VP2153 0069fe2006549ef00f02e9c1db61053e 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 VP2153 0069fe2006549ef00f02e9c1db61053e 337 PANTHER PTHR11707 1 336 7.9E-249 T 22-04-2016 VP2153 0069fe2006549ef00f02e9c1db61053e 337 Gene3D G3DSA:3.40.50.40 212 336 2.9E-48 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain VP2153 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VP2153 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VP2153 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VP2153 0069fe2006549ef00f02e9c1db61053e 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VP2153 0069fe2006549ef00f02e9c1db61053e 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 3.9E-116 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 VP2153 0069fe2006549ef00f02e9c1db61053e 337 PIRSF PIRSF001220 1 335 2.1E-94 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VP2153 0069fe2006549ef00f02e9c1db61053e 337 SUPERFAMILY SSF53774 3 336 2.49E-114 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VP2153 0069fe2006549ef00f02e9c1db61053e 337 Gene3D G3DSA:3.40.50.1170 4 206 4.1E-81 T 22-04-2016 IPR027474 L-asparaginase, N-terminal VP2153 0069fe2006549ef00f02e9c1db61053e 337 Pfam PF00710 Asparaginase, N-terminal 5 191 8.2E-67 T 22-04-2016 IPR027474 L-asparaginase, N-terminal VP1496 c3023b95035208679bb8e747ea795964 592 Gene3D G3DSA:2.170.190.11 236 327 2.6E-27 T 22-04-2016 VP1496 c3023b95035208679bb8e747ea795964 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 199 353 1.3E-32 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VP1496 c3023b95035208679bb8e747ea795964 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 8.4E-32 T 22-04-2016 IPR001453 MoaB/Mog domain VP1496 c3023b95035208679bb8e747ea795964 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 9.6E-44 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VP1496 c3023b95035208679bb8e747ea795964 592 Gene3D G3DSA:3.40.980.10 349 517 6.9E-64 T 22-04-2016 IPR001453 MoaB/Mog domain VP1496 c3023b95035208679bb8e747ea795964 592 SUPERFAMILY SSF53218 363 508 1.11E-43 T 22-04-2016 IPR001453 MoaB/Mog domain VP1496 c3023b95035208679bb8e747ea795964 592 PIRSF PIRSF036618 1 592 0.0 T 22-04-2016 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VP1496 c3023b95035208679bb8e747ea795964 592 Pfam PF03454 MoeA C-terminal region (domain IV) 516 588 1.0E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VP1496 c3023b95035208679bb8e747ea795964 592 SMART SM00852 366 503 5.3E-40 T 22-04-2016 IPR001453 MoaB/Mog domain VP1496 c3023b95035208679bb8e747ea795964 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.1E-25 T 22-04-2016 IPR001453 MoaB/Mog domain VP1496 c3023b95035208679bb8e747ea795964 592 Gene3D G3DSA:3.90.105.10 328 348 7.8E-19 T 22-04-2016 VP1496 c3023b95035208679bb8e747ea795964 592 Gene3D G3DSA:3.90.105.10 213 235 7.8E-19 T 22-04-2016 VP1496 c3023b95035208679bb8e747ea795964 592 Gene3D G3DSA:2.40.340.10 518 586 8.5E-29 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VP1496 c3023b95035208679bb8e747ea795964 592 SUPERFAMILY SSF63867 512 590 4.45E-23 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VP1496 c3023b95035208679bb8e747ea795964 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VP1496 c3023b95035208679bb8e747ea795964 592 SUPERFAMILY SSF52540 7 169 2.08E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1496 c3023b95035208679bb8e747ea795964 592 SUPERFAMILY SSF63882 192 362 1.01E-47 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VP1496 c3023b95035208679bb8e747ea795964 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 1.0E-48 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VP1496 c3023b95035208679bb8e747ea795964 592 Gene3D G3DSA:3.40.50.300 6 170 1.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1496 c3023b95035208679bb8e747ea795964 592 PANTHER PTHR10192 193 588 5.1E-160 T 22-04-2016 VP0411 4e20848e1483e0fc1422e19e71f582a5 119 SMART SM00905 6 116 7.0E-49 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP0411 4e20848e1483e0fc1422e19e71f582a5 119 SUPERFAMILY SSF55620 3 117 2.39E-37 T 22-04-2016 VP0411 4e20848e1483e0fc1422e19e71f582a5 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.1E-32 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP0411 4e20848e1483e0fc1422e19e71f582a5 119 Gene3D G3DSA:3.30.1130.10 2 117 5.4E-43 T 22-04-2016 VP0411 4e20848e1483e0fc1422e19e71f582a5 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 1.1E-36 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP0411 4e20848e1483e0fc1422e19e71f582a5 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 2.1E-30 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP0411 4e20848e1483e0fc1422e19e71f582a5 119 PANTHER PTHR20941 4 119 7.1E-34 T 22-04-2016 VP0031 39d720cdc2cb9155c9000cad9baeacaa 207 Gene3D G3DSA:3.30.70.240 139 205 6.7E-9 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP0031 39d720cdc2cb9155c9000cad9baeacaa 207 PANTHER PTHR16301 1 205 5.6E-55 T 22-04-2016 IPR023582 Impact family VP0031 39d720cdc2cb9155c9000cad9baeacaa 207 SUPERFAMILY SSF54211 5 134 5.69E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0031 39d720cdc2cb9155c9000cad9baeacaa 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 7.3E-11 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VP0031 39d720cdc2cb9155c9000cad9baeacaa 207 Gene3D G3DSA:3.30.230.30 8 135 3.5E-41 T 22-04-2016 IPR001498 Impact, N-terminal VP0031 39d720cdc2cb9155c9000cad9baeacaa 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.8E-24 T 22-04-2016 IPR001498 Impact, N-terminal VP0031 39d720cdc2cb9155c9000cad9baeacaa 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 200 1.0E-64 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal VP0031 39d720cdc2cb9155c9000cad9baeacaa 207 SUPERFAMILY SSF54980 139 204 6.62E-9 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2980 37888ee1e2b0e2eed8a5e1ea5c130f29 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 201 2.6E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VP2980 37888ee1e2b0e2eed8a5e1ea5c130f29 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 7.1E-10 T 22-04-2016 IPR023214 HAD-like domain VP2980 37888ee1e2b0e2eed8a5e1ea5c130f29 238 SUPERFAMILY SSF56784 9 238 5.05E-39 T 22-04-2016 IPR023214 HAD-like domain VP2980 37888ee1e2b0e2eed8a5e1ea5c130f29 238 PANTHER PTHR12725 1 237 1.8E-58 T 22-04-2016 VP2980 37888ee1e2b0e2eed8a5e1ea5c130f29 238 PANTHER PTHR12725:SF65 1 237 1.8E-58 T 22-04-2016 VP2980 37888ee1e2b0e2eed8a5e1ea5c130f29 238 Gene3D G3DSA:3.40.50.1000 8 44 7.6E-4 T 22-04-2016 IPR023214 HAD-like domain VP2980 37888ee1e2b0e2eed8a5e1ea5c130f29 238 Gene3D G3DSA:3.40.50.1000 108 237 1.1E-25 T 22-04-2016 IPR023214 HAD-like domain VP2743 d690991fc481fbb62a83f975f46fb600 505 Pfam PF05036 Sporulation related domain 418 491 4.0E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP2743 d690991fc481fbb62a83f975f46fb600 505 Gene3D G3DSA:3.40.50.300 26 154 3.6E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2743 d690991fc481fbb62a83f975f46fb600 505 SUPERFAMILY SSF52540 13 221 1.55E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2743 d690991fc481fbb62a83f975f46fb600 505 Pfam PF13401 AAA domain 27 128 8.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0469 17cacd3781c851064e01a7da4e58708f 269 PIRSF PIRSF000161 1 268 4.9E-88 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP0469 17cacd3781c851064e01a7da4e58708f 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP0469 17cacd3781c851064e01a7da4e58708f 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 3.2E-40 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP0469 17cacd3781c851064e01a7da4e58708f 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.494 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP0469 17cacd3781c851064e01a7da4e58708f 269 SUPERFAMILY SSF55347 127 236 1.87E-37 T 22-04-2016 VP0469 17cacd3781c851064e01a7da4e58708f 269 PANTHER PTHR20836:SF0 1 269 3.6E-101 T 22-04-2016 VP0469 17cacd3781c851064e01a7da4e58708f 269 PANTHER PTHR20836 1 269 3.6E-101 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP0469 17cacd3781c851064e01a7da4e58708f 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 6.9E-44 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP0469 17cacd3781c851064e01a7da4e58708f 269 Gene3D G3DSA:3.40.50.720 1 163 1.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0469 17cacd3781c851064e01a7da4e58708f 269 SUPERFAMILY SSF51735 236 268 1.59E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0469 17cacd3781c851064e01a7da4e58708f 269 SUPERFAMILY SSF51735 1 126 1.59E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0469 17cacd3781c851064e01a7da4e58708f 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 3.8E-98 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP1149 1cf7273335e05d352bebb34914d4e51e 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 2.6E-49 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VP1149 1cf7273335e05d352bebb34914d4e51e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.9E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VP1149 1cf7273335e05d352bebb34914d4e51e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.9E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VP1149 1cf7273335e05d352bebb34914d4e51e 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.9E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VP1149 1cf7273335e05d352bebb34914d4e51e 164 PANTHER PTHR11071:SF192 1 164 3.7E-81 T 22-04-2016 VP1149 1cf7273335e05d352bebb34914d4e51e 164 Gene3D G3DSA:2.40.100.10 2 162 1.0E-54 T 22-04-2016 IPR029000 Cyclophilin-like domain VP1149 1cf7273335e05d352bebb34914d4e51e 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VP1149 1cf7273335e05d352bebb34914d4e51e 164 SUPERFAMILY SSF50891 1 162 1.61E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain VP1149 1cf7273335e05d352bebb34914d4e51e 164 PIRSF PIRSF001467 1 163 8.3E-29 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VP1149 1cf7273335e05d352bebb34914d4e51e 164 PANTHER PTHR11071 1 164 3.7E-81 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VP2632 ec84b4266ce8788026a2dca6652ca235 336 PANTHER PTHR30146:SF46 1 327 1.9E-203 T 22-04-2016 VP2632 ec84b4266ce8788026a2dca6652ca235 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2632 ec84b4266ce8788026a2dca6652ca235 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2632 ec84b4266ce8788026a2dca6652ca235 336 SMART SM00354 1 71 5.7E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2632 ec84b4266ce8788026a2dca6652ca235 336 PANTHER PTHR30146 1 327 1.9E-203 T 22-04-2016 VP2632 ec84b4266ce8788026a2dca6652ca235 336 SUPERFAMILY SSF53822 61 325 1.31E-66 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP2632 ec84b4266ce8788026a2dca6652ca235 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.9E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2632 ec84b4266ce8788026a2dca6652ca235 336 Pfam PF13377 Periplasmic binding protein-like domain 168 325 1.0E-29 T 22-04-2016 VP2632 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:3.40.50.2300 58 166 1.6E-42 T 22-04-2016 VP2632 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:3.40.50.2300 167 325 1.7E-48 T 22-04-2016 VP2632 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:1.10.260.40 3 57 2.6E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP2632 ec84b4266ce8788026a2dca6652ca235 336 SUPERFAMILY SSF47413 2 59 1.13E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP2332 dbc7b9e7473a490a8ac6d45b8c329259 231 SUPERFAMILY SSF118196 1 226 2.48E-79 T 22-04-2016 IPR023370 TsaA-like domain VP2332 dbc7b9e7473a490a8ac6d45b8c329259 231 PANTHER PTHR12818 1 229 3.2E-117 T 22-04-2016 VP2332 dbc7b9e7473a490a8ac6d45b8c329259 231 Gene3D G3DSA:2.40.30.70 2 157 1.2E-51 T 22-04-2016 IPR023370 TsaA-like domain VP2332 dbc7b9e7473a490a8ac6d45b8c329259 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 146 4.1E-48 T 22-04-2016 IPR023370 TsaA-like domain VP2332 dbc7b9e7473a490a8ac6d45b8c329259 231 PANTHER PTHR12818:SF6 1 229 3.2E-117 T 22-04-2016 VP2332 dbc7b9e7473a490a8ac6d45b8c329259 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site VP2332 dbc7b9e7473a490a8ac6d45b8c329259 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 8.5E-41 T 22-04-2016 IPR023370 TsaA-like domain VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 38 131 1.94E-24 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 565 670 1.57E-31 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82714 182 272 1.28E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PANTHER PTHR32063:SF13 1 1053 0.0 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:1.20.1640.10 295 502 1.2E-57 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82866 296 497 1.44E-48 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:1.10.3850.10 814 1027 1.9E-50 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82714 722 809 9.42E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82866 831 1026 2.49E-41 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.2090.10 722 809 5.4E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.70.1430 38 140 2.2E-32 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.2090.10 181 275 1.2E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.70.1430 567 670 2.0E-36 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 135 182 7.59E-24 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 672 721 2.88E-26 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 808 856 2.88E-26 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 274 330 7.59E-24 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 PANTHER PTHR32063 1 1053 0.0 T 22-04-2016 VP1092 0946371f22b5a77b2e00fd2ec4511be8 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 VP0800 5feaba88f233ab63d514f678928ac598 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 54.309 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VP0800 5feaba88f233ab63d514f678928ac598 670 SUPERFAMILY SSF52113 595 670 1.74E-18 T 22-04-2016 IPR001357 BRCT domain VP0800 5feaba88f233ab63d514f678928ac598 670 Gene3D G3DSA:3.30.470.30 120 253 6.9E-52 T 22-04-2016 VP0800 5feaba88f233ab63d514f678928ac598 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 6.3E-24 T 22-04-2016 VP0800 5feaba88f233ab63d514f678928ac598 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 8.8E-135 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VP0800 5feaba88f233ab63d514f678928ac598 670 SMART SM00278 545 564 720.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP0800 5feaba88f233ab63d514f678928ac598 670 SMART SM00278 481 500 6.7 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP0800 5feaba88f233ab63d514f678928ac598 670 SMART SM00278 447 466 95.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP0800 5feaba88f233ab63d514f678928ac598 670 Gene3D G3DSA:1.10.150.20 436 504 1.0E-25 T 22-04-2016 VP0800 5feaba88f233ab63d514f678928ac598 670 Gene3D G3DSA:1.10.150.20 507 585 3.7E-31 T 22-04-2016 VP0800 5feaba88f233ab63d514f678928ac598 670 PANTHER PTHR23389:SF9 1 533 3.3E-208 T 22-04-2016 VP0800 5feaba88f233ab63d514f678928ac598 670 Gene3D G3DSA:3.40.50.10190 593 669 1.6E-24 T 22-04-2016 IPR001357 BRCT domain VP0800 5feaba88f233ab63d514f678928ac598 670 PANTHER PTHR23389 1 533 3.3E-208 T 22-04-2016 VP0800 5feaba88f233ab63d514f678928ac598 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 4.0E-266 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VP0800 5feaba88f233ab63d514f678928ac598 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 1.5E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VP0800 5feaba88f233ab63d514f678928ac598 670 PIRSF PIRSF001604 1 670 3.3E-256 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VP0800 5feaba88f233ab63d514f678928ac598 670 SMART SM00532 4 449 2.0E-280 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VP0800 5feaba88f233ab63d514f678928ac598 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site VP0800 5feaba88f233ab63d514f678928ac598 670 Gene3D G3DSA:2.40.50.140 321 392 9.7E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0800 5feaba88f233ab63d514f678928ac598 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site VP0800 5feaba88f233ab63d514f678928ac598 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 3.1E-14 T 22-04-2016 IPR001357 BRCT domain VP0800 5feaba88f233ab63d514f678928ac598 670 Gene3D G3DSA:1.10.287.610 3 68 1.1E-28 T 22-04-2016 VP0800 5feaba88f233ab63d514f678928ac598 670 SUPERFAMILY SSF56091 4 317 8.16E-126 T 22-04-2016 VP0800 5feaba88f233ab63d514f678928ac598 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 3.2E-12 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VP0800 5feaba88f233ab63d514f678928ac598 670 SUPERFAMILY SSF47781 404 584 2.82E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VP0800 5feaba88f233ab63d514f678928ac598 670 SMART SM00292 595 670 5.3E-11 T 22-04-2016 IPR001357 BRCT domain VP0800 5feaba88f233ab63d514f678928ac598 670 SUPERFAMILY SSF50249 319 400 1.56E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0800 5feaba88f233ab63d514f678928ac598 670 Pfam PF14520 Helix-hairpin-helix domain 447 503 8.0E-6 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.254 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 SMART SM00842 10 196 6.1E-95 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.1490.110 100 166 1.9E-13 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 PIRSF PIRSF003101 1 420 2.6E-146 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 168 208 3.9E-23 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 4 83 3.9E-23 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Pfam PF14450 Cell division protein FtsA 207 381 8.7E-24 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 SUPERFAMILY SSF53067 198 384 2.67E-45 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 PANTHER PTHR32432 1 420 2.4E-167 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 209 234 1.3E-26 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 298 359 1.3E-26 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 SUPERFAMILY SSF53067 8 221 1.24E-59 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.90.640.10 235 297 2.3E-19 T 22-04-2016 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-150 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VP0463 04a5bdffe53e849532eb8fcb72e72d0d 420 PANTHER PTHR32432:SF4 1 420 2.4E-167 T 22-04-2016 VP1526 867a4216eb84041bea34b9bce6e231d7 355 Gene3D G3DSA:3.40.190.10 156 299 2.6E-56 T 22-04-2016 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PIRSF PIRSF019574 12 355 1.7E-109 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PANTHER PTHR30222 1 352 2.8E-160 T 22-04-2016 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PANTHER PTHR30222:SF10 1 352 2.8E-160 T 22-04-2016 VP1526 867a4216eb84041bea34b9bce6e231d7 355 Pfam PF13416 Bacterial extracellular solute-binding protein 54 312 3.8E-37 T 22-04-2016 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 103 116 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 134 150 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 60 81 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 60 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 174 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 87 101 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 259 278 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 7.0E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1526 867a4216eb84041bea34b9bce6e231d7 355 Gene3D G3DSA:3.40.190.10 39 155 1.3E-22 T 22-04-2016 VP1526 867a4216eb84041bea34b9bce6e231d7 355 SUPERFAMILY SSF53850 38 352 5.44E-85 T 22-04-2016 VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 365 6.8E-19 T 22-04-2016 IPR001775 GspD/PilQ family VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 272 282 6.8E-19 T 22-04-2016 IPR001775 GspD/PilQ family VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 525 6.8E-19 T 22-04-2016 IPR001775 GspD/PilQ family VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 488 506 6.8E-19 T 22-04-2016 IPR001775 GspD/PilQ family VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 PANTHER PTHR30332 204 545 2.5E-76 T 22-04-2016 VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 238 523 1.3E-91 T 22-04-2016 IPR013358 Pilus biogenesis, MshL VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 PANTHER PTHR30332:SF8 204 545 2.5E-76 T 22-04-2016 VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 Pfam PF07655 Secretin N-terminal domain 145 243 3.6E-25 T 22-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 SMART SM00965 93 141 8.4E-6 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VP2704 ea495019d810dd10d03a9fb43bb6f91b 547 Pfam PF00263 Bacterial type II and III secretion system protein 346 523 7.9E-41 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VP2165 575ced79694a1045c928bb19a71026bf 99 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.3E-24 T 22-04-2016 IPR027373 Ribbon-helix-helix domain VP2730 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 22-04-2016 IPR028976 CheC-like domain VP2730 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.3E-22 T 22-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- VP2730 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.6E-44 T 22-04-2016 IPR028976 CheC-like domain VP2730 75ab96704cbd899c47e0a2b399f96a9f 153 PANTHER PTHR39452 1 153 6.5E-80 T 22-04-2016 VP2730 75ab96704cbd899c47e0a2b399f96a9f 153 PANTHER PTHR39452:SF1 1 153 6.5E-80 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 SUPERFAMILY SSF56712 3 615 1.31E-198 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Pfam PF01751 Toprim domain 5 149 7.2E-32 T 22-04-2016 IPR006171 Toprim domain VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 728 53.832 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PANTHER PTHR11390 75 781 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:1.10.460.10 171 218 3.3E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:1.10.460.10 480 602 3.3E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 SMART SM00437 279 533 1.4E-117 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 SUPERFAMILY SSF57783 749 812 2.72E-19 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:3.40.50.140 1 170 2.6E-56 T 22-04-2016 IPR006171 Toprim domain VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 SMART SM00436 140 228 2.5E-47 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 3.9E-248 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:2.20.25.10 813 870 2.9E-29 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 SUPERFAMILY SSF57783 814 870 1.43E-21 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Pfam PF01131 DNA topoisomerase 164 571 3.8E-127 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 SMART SM00493 3 139 1.3E-32 T 22-04-2016 IPR006171 Toprim domain VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PANTHER PTHR11390:SF27 75 781 0.0 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 3.8E-11 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 868 1.2E-18 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:2.70.20.10 220 341 4.7E-34 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:2.70.20.10 345 479 1.2E-32 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:3.30.65.10 603 629 1.9E-12 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:3.30.65.10 712 748 2.3E-9 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Gene3D G3DSA:3.30.65.10 749 811 3.9E-26 T 22-04-2016 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.3E-9 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 7.8E-6 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VP1022 a3468e3e0feb7d9c6fe0abc4d39802dd 876 SUPERFAMILY SSF57783 705 747 2.04E-5 T 22-04-2016 VP0783 df04199403dbdfbbb881bbc765bcf552 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 40.016 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PANTHER PTHR30381:SF1 1 363 8.0E-219 T 22-04-2016 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 Pfam PF02119 Flagellar P-ring protein 22 362 8.2E-139 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VP0783 df04199403dbdfbbb881bbc765bcf552 363 PANTHER PTHR30381 1 363 8.0E-219 T 22-04-2016 VP2779 d825e03a6199d40d866cf98ad119f459 328 SUPERFAMILY SSF50998 28 328 3.69E-45 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VP2779 d825e03a6199d40d866cf98ad119f459 328 Pfam PF13360 PQQ-like domain 170 286 6.1E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VP2779 d825e03a6199d40d866cf98ad119f459 328 PANTHER PTHR22847 53 285 8.6E-25 T 22-04-2016 VP2779 d825e03a6199d40d866cf98ad119f459 328 Gene3D G3DSA:2.130.10.10 94 327 6.9E-38 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VP2779 d825e03a6199d40d866cf98ad119f459 328 Gene3D G3DSA:2.130.10.10 28 93 1.2E-6 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VP2779 d825e03a6199d40d866cf98ad119f459 328 SMART SM00320 285 323 170.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VP2779 d825e03a6199d40d866cf98ad119f459 328 SMART SM00320 68 106 6.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VP2779 d825e03a6199d40d866cf98ad119f459 328 SMART SM00320 192 230 0.1 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VP2779 d825e03a6199d40d866cf98ad119f459 328 SMART SM00320 233 274 0.3 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VP2779 d825e03a6199d40d866cf98ad119f459 328 SMART SM00320 151 189 2.1E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VP2779 d825e03a6199d40d866cf98ad119f459 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 22-04-2016 IPR019775 WD40 repeat, conserved site VP0520 808bb4b0698b750933283f035316c3c5 174 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VP0520 808bb4b0698b750933283f035316c3c5 174 SUPERFAMILY SSF55811 6 152 8.53E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP0520 808bb4b0698b750933283f035316c3c5 174 Gene3D G3DSA:3.90.79.10 5 151 4.3E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP0520 808bb4b0698b750933283f035316c3c5 174 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH VP0520 808bb4b0698b750933283f035316c3c5 174 Pfam PF00293 NUDIX domain 7 145 6.2E-27 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VP0520 808bb4b0698b750933283f035316c3c5 174 PANTHER PTHR23114 1 160 1.7E-63 T 22-04-2016 VP0520 808bb4b0698b750933283f035316c3c5 174 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase VP0520 808bb4b0698b750933283f035316c3c5 174 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase VP0477 51cde8f515df677f1c4244c5fc78b43a 275 PANTHER PTHR30535 21 268 5.7E-55 T 22-04-2016 VP0477 51cde8f515df677f1c4244c5fc78b43a 275 SUPERFAMILY SSF53807 20 267 8.63E-59 T 22-04-2016 VP0477 51cde8f515df677f1c4244c5fc78b43a 275 Gene3D G3DSA:3.40.50.1980 23 141 9.2E-30 T 22-04-2016 VP0477 51cde8f515df677f1c4244c5fc78b43a 275 Gene3D G3DSA:3.40.50.1980 144 268 5.9E-36 T 22-04-2016 VP0477 51cde8f515df677f1c4244c5fc78b43a 275 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 272 52.339 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VP0477 51cde8f515df677f1c4244c5fc78b43a 275 Pfam PF01497 Periplasmic binding protein 26 247 5.5E-30 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 Gene3D G3DSA:3.30.379.10 136 256 1.8E-16 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 Gene3D G3DSA:3.20.20.80 258 637 7.0E-136 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 SUPERFAMILY SSF55545 125 259 3.29E-25 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 SUPERFAMILY SSF51445 260 620 5.62E-129 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PANTHER PTHR22600:SF21 79 320 4.6E-194 T 22-04-2016 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PANTHER PTHR22600:SF21 336 638 4.6E-194 T 22-04-2016 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PANTHER PTHR22600 79 320 4.6E-194 T 22-04-2016 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PANTHER PTHR22600 336 638 4.6E-194 T 22-04-2016 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 8.0E-14 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 5.1E-120 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2486 76229ba8ce1abb83e381e1c92bc057e6 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP2349 c93ab0174b591ae458734a543147fd9d 261 Pfam PF04205 FMN-binding domain 148 243 5.7E-14 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VP2349 c93ab0174b591ae458734a543147fd9d 261 PANTHER PTHR37838 1 261 4.3E-100 T 22-04-2016 VP2349 c93ab0174b591ae458734a543147fd9d 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 35.403 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VP2349 c93ab0174b591ae458734a543147fd9d 261 SMART SM00900 148 246 8.7E-32 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VP2349 c93ab0174b591ae458734a543147fd9d 261 PANTHER PTHR37838:SF1 1 261 4.3E-100 T 22-04-2016 VP2349 c93ab0174b591ae458734a543147fd9d 261 PIRSF PIRSF009437 1 261 3.8E-103 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VP2349 c93ab0174b591ae458734a543147fd9d 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 3.6E-96 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VP1916 800aee5f2a14da020f5096a491cbb958 529 Pfam PF01471 Putative peptidoglycan binding domain 245 276 4.5E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like VP1916 800aee5f2a14da020f5096a491cbb958 529 Gene3D G3DSA:1.10.101.10 227 285 1.9E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like VP1916 800aee5f2a14da020f5096a491cbb958 529 PANTHER PTHR41533:SF1 54 528 1.3E-109 T 22-04-2016 VP1916 800aee5f2a14da020f5096a491cbb958 529 Gene3D G3DSA:2.40.440.10 298 348 3.7E-12 T 22-04-2016 VP1916 800aee5f2a14da020f5096a491cbb958 529 Gene3D G3DSA:2.40.440.10 415 464 3.7E-12 T 22-04-2016 VP1916 800aee5f2a14da020f5096a491cbb958 529 SUPERFAMILY SSF141523 303 357 6.8E-20 T 22-04-2016 VP1916 800aee5f2a14da020f5096a491cbb958 529 SUPERFAMILY SSF141523 413 464 6.8E-20 T 22-04-2016 VP1916 800aee5f2a14da020f5096a491cbb958 529 Pfam PF03734 L,D-transpeptidase catalytic domain 304 470 4.1E-30 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 VP1916 800aee5f2a14da020f5096a491cbb958 529 PANTHER PTHR41533 54 528 1.3E-109 T 22-04-2016 VP1916 800aee5f2a14da020f5096a491cbb958 529 SUPERFAMILY SSF53955 252 323 8.44E-11 T 22-04-2016 IPR023346 Lysozyme-like domain VP2546 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.524 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VP2546 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VP2546 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 22-04-2016 VP2546 84478de520e13c85d4054d4cf84fd9d1 65 PANTHER PTHR34984:SF1 1 55 1.5E-31 T 22-04-2016 VP2546 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.1E-26 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VP2546 84478de520e13c85d4054d4cf84fd9d1 65 PANTHER PTHR34984 1 55 1.5E-31 T 22-04-2016 VP2546 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.48 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 SUPERFAMILY SSF54211 484 604 5.31E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.3E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Gene3D G3DSA:3.30.70.870 411 485 1.7E-38 T 22-04-2016 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Pfam PF00679 Elongation factor G C-terminus 605 692 4.2E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 SMART SM00838 605 693 6.1E-57 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 1.4E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PANTHER PTHR23115:SF66 308 697 0.0 T 22-04-2016 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 SMART SM00889 485 603 4.6E-76 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.2E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 SUPERFAMILY SSF54980 608 695 3.36E-30 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 SUPERFAMILY SSF52540 6 288 5.22E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-66 T 22-04-2016 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 SUPERFAMILY SSF50447 271 409 8.84E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Gene3D G3DSA:3.30.230.10 489 604 1.9E-52 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Gene3D G3DSA:3.40.50.300 6 293 3.2E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.1E-33 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PANTHER PTHR23115 308 697 0.0 T 22-04-2016 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Gene3D G3DSA:3.30.70.240 605 691 2.7E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2771 c00f03dbe7d2ad42639fa7147dfa3042 699 Gene3D G3DSA:2.40.30.10 310 410 3.2E-39 T 22-04-2016 VP2323 c83d0e3fc1bdff71b7e8b6131b3dca53 104 PANTHER PTHR39586 2 103 6.8E-36 T 22-04-2016 VP2323 c83d0e3fc1bdff71b7e8b6131b3dca53 104 Gene3D G3DSA:1.20.1440.40 1 104 7.6E-40 T 22-04-2016 IPR023376 YqcC-like domain VP2323 c83d0e3fc1bdff71b7e8b6131b3dca53 104 SUPERFAMILY SSF158452 1 103 1.44E-38 T 22-04-2016 IPR023376 YqcC-like domain VP2323 c83d0e3fc1bdff71b7e8b6131b3dca53 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 2.2E-35 T 22-04-2016 IPR023376 YqcC-like domain VP2323 c83d0e3fc1bdff71b7e8b6131b3dca53 104 PIRSF PIRSF006257 1 104 1.3E-44 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 VP1640 8ab9e1d023959355013f48653b330535 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 22-04-2016 VP1640 8ab9e1d023959355013f48653b330535 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.7E-66 T 22-04-2016 IPR023214 HAD-like domain VP1640 8ab9e1d023959355013f48653b330535 269 Gene3D G3DSA:3.40.50.1000 1 75 4.7E-57 T 22-04-2016 IPR023214 HAD-like domain VP1640 8ab9e1d023959355013f48653b330535 269 Gene3D G3DSA:3.40.50.1000 181 267 4.7E-57 T 22-04-2016 IPR023214 HAD-like domain VP1640 8ab9e1d023959355013f48653b330535 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 1.8E-61 T 22-04-2016 IPR000150 Cof protein GO:0016787 VP1640 8ab9e1d023959355013f48653b330535 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 3.1E-26 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VP1640 8ab9e1d023959355013f48653b330535 269 PANTHER PTHR10000:SF29 1 268 8.1E-117 T 22-04-2016 VP1640 8ab9e1d023959355013f48653b330535 269 SUPERFAMILY SSF56784 1 267 3.09E-75 T 22-04-2016 IPR023214 HAD-like domain VP1640 8ab9e1d023959355013f48653b330535 269 PANTHER PTHR10000 1 268 8.1E-117 T 22-04-2016 VP1640 8ab9e1d023959355013f48653b330535 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 VP1640 8ab9e1d023959355013f48653b330535 269 Gene3D G3DSA:3.30.1240.10 88 180 2.4E-31 T 22-04-2016 VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 3.3E-16 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 Gene3D G3DSA:1.10.10.10 2 97 9.0E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 SMART SM00418 15 93 5.2E-28 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PANTHER PTHR33154 1 96 6.9E-29 T 22-04-2016 VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 SUPERFAMILY SSF46785 9 96 2.92E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0529 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PANTHER PTHR33154:SF10 1 96 6.9E-29 T 22-04-2016 VP1201 5ea8d448344fd684b0d755a40278c22b 562 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 447 555 4.3E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1201 5ea8d448344fd684b0d755a40278c22b 562 PANTHER PTHR24423 331 560 1.6E-46 T 22-04-2016 VP1201 5ea8d448344fd684b0d755a40278c22b 562 PANTHER PTHR24423 302 314 1.6E-46 T 22-04-2016 VP1201 5ea8d448344fd684b0d755a40278c22b 562 SUPERFAMILY SSF47384 327 398 3.53E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1201 5ea8d448344fd684b0d755a40278c22b 562 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 7 241 7.5E-36 T 22-04-2016 VP1201 5ea8d448344fd684b0d755a40278c22b 562 Pfam PF00512 His Kinase A (phospho-acceptor) domain 337 398 1.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1201 5ea8d448344fd684b0d755a40278c22b 562 PANTHER PTHR24423:SF497 331 560 1.6E-46 T 22-04-2016 VP1201 5ea8d448344fd684b0d755a40278c22b 562 SUPERFAMILY SSF53850 12 238 4.83E-16 T 22-04-2016 VP1201 5ea8d448344fd684b0d755a40278c22b 562 Gene3D G3DSA:1.10.287.130 334 396 7.4E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1201 5ea8d448344fd684b0d755a40278c22b 562 SMART SM00387 446 557 3.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1201 5ea8d448344fd684b0d755a40278c22b 562 PANTHER PTHR24423:SF497 302 314 1.6E-46 T 22-04-2016 VP1201 5ea8d448344fd684b0d755a40278c22b 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 9.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1201 5ea8d448344fd684b0d755a40278c22b 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 9.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1201 5ea8d448344fd684b0d755a40278c22b 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 516 9.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1201 5ea8d448344fd684b0d755a40278c22b 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 503 9.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1201 5ea8d448344fd684b0d755a40278c22b 562 SMART SM00388 335 404 4.5E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1201 5ea8d448344fd684b0d755a40278c22b 562 Gene3D G3DSA:3.30.565.10 404 556 3.6E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1201 5ea8d448344fd684b0d755a40278c22b 562 Gene3D G3DSA:3.40.190.10 88 189 6.8E-4 T 22-04-2016 VP1201 5ea8d448344fd684b0d755a40278c22b 562 SUPERFAMILY SSF55874 390 555 1.57E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0109 a7f99f3749c2f6ac980768dec828bae4 219 SUPERFAMILY SSF52540 6 197 7.83E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0109 a7f99f3749c2f6ac980768dec828bae4 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.582 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 VP0109 a7f99f3749c2f6ac980768dec828bae4 219 PANTHER PTHR11649 11 211 2.0E-54 T 22-04-2016 VP0109 a7f99f3749c2f6ac980768dec828bae4 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 2.7E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0109 a7f99f3749c2f6ac980768dec828bae4 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.9E-74 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 VP0109 a7f99f3749c2f6ac980768dec828bae4 219 Gene3D G3DSA:3.40.50.300 7 197 4.9E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2380 e425b6d9240dce83a179fdbd628ee4dc 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.099 T 22-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VP2380 e425b6d9240dce83a179fdbd628ee4dc 343 Gene3D G3DSA:2.160.10.10 173 340 3.5E-33 T 22-04-2016 VP2380 e425b6d9240dce83a179fdbd628ee4dc 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.9E-16 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VP2380 e425b6d9240dce83a179fdbd628ee4dc 343 SUPERFAMILY SSF51161 90 324 5.68E-35 T 22-04-2016 IPR011004 Trimeric LpxA-like VP2380 e425b6d9240dce83a179fdbd628ee4dc 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 22-04-2016 IPR001451 Hexapeptide repeat VP2380 e425b6d9240dce83a179fdbd628ee4dc 343 Gene3D G3DSA:3.30.60.70 131 171 2.7E-22 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VP2380 e425b6d9240dce83a179fdbd628ee4dc 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 5.6E-181 T 22-04-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VP0315 c714666d5b12b63399c108310877f57c 212 PANTHER PTHR30108 1 66 1.5E-82 T 22-04-2016 VP0315 c714666d5b12b63399c108310877f57c 212 PANTHER PTHR30108 83 212 1.5E-82 T 22-04-2016 VP0315 c714666d5b12b63399c108310877f57c 212 SUPERFAMILY SSF52507 11 207 4.45E-57 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VP0315 c714666d5b12b63399c108310877f57c 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 11 208 34.851 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VP0315 c714666d5b12b63399c108310877f57c 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 13 206 3.4E-57 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VP0315 c714666d5b12b63399c108310877f57c 212 Pfam PF02441 Flavoprotein 12 149 2.5E-24 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VP0315 c714666d5b12b63399c108310877f57c 212 PANTHER PTHR30108:SF2 1 66 1.5E-82 T 22-04-2016 VP0315 c714666d5b12b63399c108310877f57c 212 PANTHER PTHR30108:SF2 83 212 1.5E-82 T 22-04-2016 VP0315 c714666d5b12b63399c108310877f57c 212 Gene3D G3DSA:3.40.50.1950 12 210 7.4E-74 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VP1699 2126f4611fd38bf0738dbaeb42389468 286 SUPERFAMILY SSF46689 179 226 2.87E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1699 2126f4611fd38bf0738dbaeb42389468 286 Pfam PF12833 Helix-turn-helix domain 199 276 2.7E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP1699 2126f4611fd38bf0738dbaeb42389468 286 SUPERFAMILY SSF46689 229 277 5.82E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1699 2126f4611fd38bf0738dbaeb42389468 286 SMART SM00342 193 276 4.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP1699 2126f4611fd38bf0738dbaeb42389468 286 PANTHER PTHR11019:SF81 181 284 3.3E-31 T 22-04-2016 VP1699 2126f4611fd38bf0738dbaeb42389468 286 Gene3D G3DSA:1.10.10.60 177 229 5.4E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1699 2126f4611fd38bf0738dbaeb42389468 286 SUPERFAMILY SSF51215 32 103 4.84E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VP1699 2126f4611fd38bf0738dbaeb42389468 286 Gene3D G3DSA:1.10.10.60 230 278 4.2E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1699 2126f4611fd38bf0738dbaeb42389468 286 PANTHER PTHR11019 181 284 3.3E-31 T 22-04-2016 VP1699 2126f4611fd38bf0738dbaeb42389468 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 5.9E-8 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP1699 2126f4611fd38bf0738dbaeb42389468 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 5.9E-8 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP1699 2126f4611fd38bf0738dbaeb42389468 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VP2100 858ace092daa867a30af7a1a34d21ed4 676 SMART SM00487 9 426 1.8E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP2100 858ace092daa867a30af7a1a34d21ed4 676 Pfam PF00271 Helicase conserved C-terminal domain 436 546 8.6E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VP2100 858ace092daa867a30af7a1a34d21ed4 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 2.9E-21 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain VP2100 858ace092daa867a30af7a1a34d21ed4 676 SUPERFAMILY SSF46600 625 672 1.57E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 VP2100 858ace092daa867a30af7a1a34d21ed4 676 Gene3D G3DSA:3.40.50.300 420 581 3.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2100 858ace092daa867a30af7a1a34d21ed4 676 Gene3D G3DSA:4.10.860.10 617 673 2.5E-17 T 22-04-2016 IPR001943 UVR domain GO:0005515 VP2100 858ace092daa867a30af7a1a34d21ed4 676 PANTHER PTHR24029 1 674 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VP2100 858ace092daa867a30af7a1a34d21ed4 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 129 4.1E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VP2100 858ace092daa867a30af7a1a34d21ed4 676 Pfam PF02151 UvrB/uvrC motif 636 671 4.4E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 VP2100 858ace092daa867a30af7a1a34d21ed4 676 Gene3D G3DSA:3.40.50.300 389 407 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2100 858ace092daa867a30af7a1a34d21ed4 676 Gene3D G3DSA:3.40.50.300 6 89 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2100 858ace092daa867a30af7a1a34d21ed4 676 Gene3D G3DSA:3.40.50.300 279 339 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2100 858ace092daa867a30af7a1a34d21ed4 676 SUPERFAMILY SSF52540 460 584 5.61E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2100 858ace092daa867a30af7a1a34d21ed4 676 SUPERFAMILY SSF52540 37 82 5.61E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2100 858ace092daa867a30af7a1a34d21ed4 676 SUPERFAMILY SSF52540 5 416 7.72E-137 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2100 858ace092daa867a30af7a1a34d21ed4 676 SMART SM00490 461 547 2.7E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VP2100 858ace092daa867a30af7a1a34d21ed4 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.983 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VP2100 858ace092daa867a30af7a1a34d21ed4 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VP2100 858ace092daa867a30af7a1a34d21ed4 676 Gene3D G3DSA:3.30.2060.10 159 231 8.3E-12 T 22-04-2016 VP0269 995258917665b7f2c876eb4d7e2c5d48 179 PANTHER PTHR11994 1 178 2.9E-101 T 22-04-2016 VP0269 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00281 Ribosomal protein L5 24 80 2.1E-29 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal VP0269 995258917665b7f2c876eb4d7e2c5d48 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.054 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0269 995258917665b7f2c876eb4d7e2c5d48 179 Gene3D G3DSA:3.30.1440.10 2 179 1.1E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain VP0269 995258917665b7f2c876eb4d7e2c5d48 179 SUPERFAMILY SSF55282 4 179 1.44E-78 T 22-04-2016 IPR022803 Ribosomal protein L5 domain VP0269 995258917665b7f2c876eb4d7e2c5d48 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0269 995258917665b7f2c876eb4d7e2c5d48 179 PIRSF PIRSF002161 1 179 2.6E-66 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 VP0269 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.5E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal VP0740 7b68bea776a3392c9517683772a7be44 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 3.5E-9 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VP0740 7b68bea776a3392c9517683772a7be44 295 Gene3D G3DSA:3.30.70.890 168 284 3.7E-43 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP0740 7b68bea776a3392c9517683772a7be44 295 Pfam PF08544 GHMP kinases C terminal 209 265 1.2E-6 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP0740 7b68bea776a3392c9517683772a7be44 295 PANTHER PTHR20861:SF2 5 280 3.7E-98 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VP0740 7b68bea776a3392c9517683772a7be44 295 Gene3D G3DSA:3.30.230.10 12 165 5.5E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0740 7b68bea776a3392c9517683772a7be44 295 SUPERFAMILY SSF55060 167 282 6.23E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP0740 7b68bea776a3392c9517683772a7be44 295 PIRSF PIRSF010376 9 285 1.9E-87 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VP0740 7b68bea776a3392c9517683772a7be44 295 PANTHER PTHR20861 5 280 3.7E-98 T 22-04-2016 VP0740 7b68bea776a3392c9517683772a7be44 295 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.404 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VP0740 7b68bea776a3392c9517683772a7be44 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 284 3.1E-95 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VP0740 7b68bea776a3392c9517683772a7be44 295 SUPERFAMILY SSF54211 11 163 9.11E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP1497 76fee57cf36bde44eaccb3d31e2ce2f8 207 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 20 200 3.3E-73 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VP1497 76fee57cf36bde44eaccb3d31e2ce2f8 207 Pfam PF12804 MobA-like NTP transferase domain 22 170 1.9E-34 T 22-04-2016 IPR025877 MobA-like NTP transferase VP1497 76fee57cf36bde44eaccb3d31e2ce2f8 207 Gene3D G3DSA:3.90.550.10 16 204 6.9E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1497 76fee57cf36bde44eaccb3d31e2ce2f8 207 SUPERFAMILY SSF53448 19 201 2.14E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1497 76fee57cf36bde44eaccb3d31e2ce2f8 207 PANTHER PTHR19136 11 205 1.4E-53 T 22-04-2016 VP1497 76fee57cf36bde44eaccb3d31e2ce2f8 207 PANTHER PTHR19136:SF81 11 205 1.4E-53 T 22-04-2016 VP1497 76fee57cf36bde44eaccb3d31e2ce2f8 207 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 17 202 30.234 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VP0235 9c525ab83ff102b602e66d9646e32c98 649 Gene3D G3DSA:3.40.50.720 141 229 3.6E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0235 9c525ab83ff102b602e66d9646e32c98 649 SUPERFAMILY SSF51735 144 268 7.09E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0235 9c525ab83ff102b602e66d9646e32c98 649 SUPERFAMILY SSF51735 281 558 5.58E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0235 9c525ab83ff102b602e66d9646e32c98 649 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 6.3E-128 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VP0235 9c525ab83ff102b602e66d9646e32c98 649 Pfam PF13727 CoA-binding domain 68 238 2.2E-10 T 22-04-2016 VP0235 9c525ab83ff102b602e66d9646e32c98 649 PANTHER PTHR10366:SF256 282 564 8.1E-121 T 22-04-2016 VP0235 9c525ab83ff102b602e66d9646e32c98 649 Gene3D G3DSA:3.40.50.720 283 532 3.8E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0235 9c525ab83ff102b602e66d9646e32c98 649 PANTHER PTHR10366 282 564 8.1E-121 T 22-04-2016 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.20.5.110 190 231 1.4E-15 T 22-04-2016 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.20.120.350 30 142 6.1E-16 T 22-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 PANTHER PTHR11537 28 268 1.9E-20 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 PANTHER PTHR11537:SF14 28 268 1.9E-20 T 22-04-2016 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 198 224 8.2E-6 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 107 133 8.2E-6 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 169 191 8.2E-6 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.10.287.70 143 188 7.4E-16 T 22-04-2016 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 Pfam PF00520 Ion transport protein 62 226 7.9E-15 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VP0422 4803098475b090c0d40b3dbcd8ce64ca 272 SUPERFAMILY SSF81324 26 225 2.57E-45 T 22-04-2016 VP0986 2c3e34cb46a135cc460489f255213046 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 5.6E-188 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 VP0986 2c3e34cb46a135cc460489f255213046 423 PANTHER PTHR30510 1 421 2.7E-190 T 22-04-2016 VP0986 2c3e34cb46a135cc460489f255213046 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.551 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 VP1772 63b171e90c246cc5de66f922b30687bd 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VP1772 63b171e90c246cc5de66f922b30687bd 481 SUPERFAMILY SSF53720 24 479 2.62E-162 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP1772 63b171e90c246cc5de66f922b30687bd 481 Pfam PF00171 Aldehyde dehydrogenase family 24 475 6.2E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP1772 63b171e90c246cc5de66f922b30687bd 481 Gene3D G3DSA:3.40.605.10 24 268 9.8E-93 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP1772 63b171e90c246cc5de66f922b30687bd 481 PANTHER PTHR11699:SF49 18 478 1.4E-260 T 22-04-2016 VP1772 63b171e90c246cc5de66f922b30687bd 481 PANTHER PTHR11699 18 478 1.4E-260 T 22-04-2016 VP1772 63b171e90c246cc5de66f922b30687bd 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VP1772 63b171e90c246cc5de66f922b30687bd 481 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 29 474 7.5E-202 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 VP1772 63b171e90c246cc5de66f922b30687bd 481 Gene3D G3DSA:3.40.309.10 269 451 2.1E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP2461 049e2634316cdec2108c110d01e55974 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 1.8E-204 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 SUPERFAMILY SSF53738 157 257 3.57E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 Gene3D G3DSA:3.40.120.10 177 251 6.3E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 Gene3D G3DSA:3.30.310.50 363 443 4.8E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 PANTHER PTHR22573:SF15 3 446 4.3E-175 T 22-04-2016 VP2461 049e2634316cdec2108c110d01e55974 446 SUPERFAMILY SSF55957 358 444 2.88E-22 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.987 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 6.7E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 SUPERFAMILY SSF53738 259 365 2.2E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 PANTHER PTHR22573 3 446 4.3E-175 T 22-04-2016 VP2461 049e2634316cdec2108c110d01e55974 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.6E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.9E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.9E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.9E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 SUPERFAMILY SSF53738 4 182 7.46E-49 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.4E-45 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 Gene3D G3DSA:3.40.120.10 5 153 2.4E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 3.5E-19 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2461 049e2634316cdec2108c110d01e55974 446 Gene3D G3DSA:3.40.120.10 252 362 1.1E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0523 abda19c023f29bfc3ebae1712febce3b 273 PANTHER PTHR30589 2 261 5.9E-124 T 22-04-2016 VP0523 abda19c023f29bfc3ebae1712febce3b 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VP0523 abda19c023f29bfc3ebae1712febce3b 273 PANTHER PTHR30589:SF0 2 261 5.9E-124 T 22-04-2016 VP0523 abda19c023f29bfc3ebae1712febce3b 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.1E-83 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VP0523 abda19c023f29bfc3ebae1712febce3b 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 1.0E-90 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VP0523 abda19c023f29bfc3ebae1712febce3b 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.155 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VP1177 76a7cb7010409fe05ae0ccbafe8af855 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 354 6.7E-66 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VP1177 76a7cb7010409fe05ae0ccbafe8af855 361 Gene3D G3DSA:2.40.50.100 152 183 2.0E-17 T 22-04-2016 VP1177 76a7cb7010409fe05ae0ccbafe8af855 361 Gene3D G3DSA:2.40.50.100 61 91 2.0E-17 T 22-04-2016 VP1177 76a7cb7010409fe05ae0ccbafe8af855 361 PANTHER PTHR30469:SF10 4 361 5.7E-108 T 22-04-2016 VP1177 76a7cb7010409fe05ae0ccbafe8af855 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 253 1.8E-10 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VP1177 76a7cb7010409fe05ae0ccbafe8af855 361 PANTHER PTHR30469 4 361 5.7E-108 T 22-04-2016 VP1177 76a7cb7010409fe05ae0ccbafe8af855 361 SUPERFAMILY SSF111369 50 265 6.8E-28 T 22-04-2016 VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 PANTHER PTHR13710:SF81 13 358 5.7E-157 T 22-04-2016 VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 PANTHER PTHR13710:SF81 520 651 5.7E-157 T 22-04-2016 VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 SUPERFAMILY SSF52540 73 351 3.58E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 22 362 1.9E-112 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 Gene3D G3DSA:3.40.50.300 16 203 5.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 147 156 - T 22-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 Gene3D G3DSA:1.10.10.10 527 651 3.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 SMART SM00490 258 339 4.7E-28 T 22-04-2016 IPR001650 Helicase, C-terminal VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 SMART SM00487 28 224 1.8E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 Pfam PF16124 RecQ zinc-binding 525 572 1.4E-8 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 Pfam PF00271 Helicase conserved C-terminal domain 243 339 1.5E-17 T 22-04-2016 IPR001650 Helicase, C-terminal VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 PANTHER PTHR13710 13 358 5.7E-157 T 22-04-2016 VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 PANTHER PTHR13710 520 651 5.7E-157 T 22-04-2016 VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 Gene3D G3DSA:3.40.50.300 213 348 7.7E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2340 90fd8f1d15dab5c8904889ee49dd8e77 654 Pfam PF00270 DEAD/DEAH box helicase 35 194 1.4E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.5E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 8.2E-31 T 22-04-2016 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 SUPERFAMILY SSF47413 1 51 1.22E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 PANTHER PTHR30146 1 328 1.1E-155 T 22-04-2016 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 SMART SM00354 1 74 1.8E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 PANTHER PTHR30146:SF28 1 328 1.1E-155 T 22-04-2016 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 Gene3D G3DSA:1.10.260.40 1 48 4.1E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 Gene3D G3DSA:3.40.50.2300 166 328 2.0E-44 T 22-04-2016 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 Gene3D G3DSA:3.40.50.2300 76 165 1.4E-5 T 22-04-2016 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2402 a0362f90be264805b0069f6c8fc14eb8 328 SUPERFAMILY SSF53822 77 324 2.16E-43 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP1893 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 3.5E-207 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 PANTHER PTHR22594 6 180 2.2E-249 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 PANTHER PTHR22594 199 465 2.2E-249 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 SUPERFAMILY SSF55681 97 464 3.98E-95 T 22-04-2016 VP1893 0409801b4b1a37410b0f585f25fc2948 466 SUPERFAMILY SSF50249 15 101 8.78E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1893 0409801b4b1a37410b0f585f25fc2948 466 PANTHER PTHR22594:SF6 6 180 2.2E-249 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 PANTHER PTHR22594:SF6 199 465 2.2E-249 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 Gene3D G3DSA:2.40.50.140 15 103 6.4E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1893 0409801b4b1a37410b0f585f25fc2948 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.5E-12 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VP1893 0409801b4b1a37410b0f585f25fc2948 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.6E-81 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1893 0409801b4b1a37410b0f585f25fc2948 466 Gene3D G3DSA:3.30.930.10 109 462 1.8E-112 T 22-04-2016 VP1893 0409801b4b1a37410b0f585f25fc2948 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.922 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 Gene3D G3DSA:3.30.70.260 1 78 8.9E-36 T 22-04-2016 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 Pfam PF13710 ACT domain 11 73 9.9E-18 T 22-04-2016 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 Gene3D G3DSA:3.30.70.1150 83 163 9.2E-29 T 22-04-2016 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 SUPERFAMILY SSF55021 1 75 2.69E-22 T 22-04-2016 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.2E-25 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-37 T 22-04-2016 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 SUPERFAMILY SSF55021 79 162 6.51E-27 T 22-04-2016 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.1E-63 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0353 5d2dbaa3ecab8f3f0e963a446b11de62 164 PANTHER PTHR30239 1 162 9.9E-92 T 22-04-2016 VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.75 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.3E-85 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 Pfam PF00925 GTP cyclohydrolase II 207 367 8.7E-42 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 Gene3D G3DSA:3.90.870.10 2 211 7.1E-102 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 PIRSF PIRSF001259 3 369 1.3E-130 T 22-04-2016 VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 3.8E-76 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 PANTHER PTHR21327 7 367 6.1E-157 T 22-04-2016 VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 SUPERFAMILY SSF142695 205 367 2.22E-48 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 SUPERFAMILY SSF55821 3 202 1.9E-87 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VP0681 f193009424a5d20cfcb7cfc9ea8364bc 369 PANTHER PTHR21327:SF6 7 367 6.1E-157 T 22-04-2016 VP2069 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:2.40.50.140 580 687 3.0E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2069 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF57770 147 181 4.19E-13 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VP2069 2c5687f25578b86879971a5a6456d94e 688 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.615 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VP2069 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF50249 583 687 1.86E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2069 2c5687f25578b86879971a5a6456d94e 688 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:3.40.50.620 188 384 2.0E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2069 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:3.40.50.620 11 149 2.0E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2069 2c5687f25578b86879971a5a6456d94e 688 PANTHER PTHR11946 11 643 2.4E-265 T 22-04-2016 VP2069 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 PANTHER PTHR11946:SF86 11 643 2.4E-265 T 22-04-2016 VP2069 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:1.10.730.10 385 539 1.8E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF47323 394 552 4.36E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 549 687 8.6E-47 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VP2069 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:2.20.28.20 150 181 3.2E-20 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VP2069 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF52374 10 146 9.98E-102 T 22-04-2016 VP2069 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF52374 181 392 9.98E-102 T 22-04-2016 VP2069 2c5687f25578b86879971a5a6456d94e 688 Pfam PF01588 Putative tRNA binding domain 593 685 6.0E-26 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 Pfam PF09334 tRNA synthetases class I (M) 14 401 4.2E-166 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2069 2c5687f25578b86879971a5a6456d94e 688 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 6.5E-202 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 SUPERFAMILY SSF52402 5 247 1.15E-56 T 22-04-2016 VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 1.5E-152 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 PANTHER PTHR11933:SF10 1 370 8.6E-215 T 22-04-2016 VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:2.40.30.10 288 370 1.4E-33 T 22-04-2016 VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:3.40.50.620 4 214 5.8E-98 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.944 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 Pfam PF03054 tRNA methyl transferase 7 365 2.9E-142 T 22-04-2016 VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:2.30.30.280 216 285 7.3E-30 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 VP1130 f1555e0b3ce263e2b1f956825af51d6b 374 PANTHER PTHR11933 1 370 8.6E-215 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 SUPERFAMILY SSF117892 53 187 1.7E-40 T 22-04-2016 IPR001107 Band 7 domain VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 SMART SM00244 22 180 1.9E-58 T 22-04-2016 IPR001107 Band 7 domain VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 PANTHER PTHR10264 2 301 3.2E-118 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 PANTHER PTHR10264:SF27 2 301 3.2E-118 T 22-04-2016 VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 77 98 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 175 196 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 156 174 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 112 129 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 132 155 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 Pfam PF01145 SPFH domain / Band 7 family 26 195 4.0E-34 T 22-04-2016 IPR001107 Band 7 domain VP0805 bdb1d7b7e466aa4fea049f5df8ceb888 305 Pfam PF16200 C-terminal region of band_7 242 303 1.8E-7 T 22-04-2016 IPR032435 Band 7, C-terminal extension VP0963 74e8c041b4be027701c8f322d0098b86 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 661 3.2E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP0963 74e8c041b4be027701c8f322d0098b86 663 Pfam PF00672 HAMP domain 315 382 9.9E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0963 74e8c041b4be027701c8f322d0098b86 663 SMART SM00283 401 662 6.1E-74 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP0963 74e8c041b4be027701c8f322d0098b86 663 Gene3D G3DSA:1.10.287.950 416 632 4.4E-55 T 22-04-2016 VP0963 74e8c041b4be027701c8f322d0098b86 663 SUPERFAMILY SSF58104 354 663 2.62E-73 T 22-04-2016 VP0963 74e8c041b4be027701c8f322d0098b86 663 PANTHER PTHR32089:SF58 1 663 2.1E-234 T 22-04-2016 VP0963 74e8c041b4be027701c8f322d0098b86 663 PANTHER PTHR32089 1 663 2.1E-234 T 22-04-2016 VP0963 74e8c041b4be027701c8f322d0098b86 663 SMART SM00304 334 386 4.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1789 72dcc5852186f1e1cac8deb857bd358c 164 Pfam PF05901 Excalibur calcium-binding domain 124 157 3.9E-10 T 22-04-2016 IPR008613 Excalibur calcium-binding domain VP1789 72dcc5852186f1e1cac8deb857bd358c 164 Gene3D G3DSA:2.40.50.140 9 77 1.5E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1789 72dcc5852186f1e1cac8deb857bd358c 164 Pfam PF00313 'Cold-shock' DNA-binding domain 14 69 2.5E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP1789 72dcc5852186f1e1cac8deb857bd358c 164 ProSitePatterns PS00352 'Cold-shock' domain signature. 23 42 - T 22-04-2016 IPR019844 Cold-shock conserved site VP1789 72dcc5852186f1e1cac8deb857bd358c 164 SMART SM00357 11 74 6.4E-10 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VP1789 72dcc5852186f1e1cac8deb857bd358c 164 SUPERFAMILY SSF50249 6 74 1.05E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2838 f04588872ef17d39faf46cc9c3f61218 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 319 4.1E-45 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2838 f04588872ef17d39faf46cc9c3f61218 323 Gene3D G3DSA:3.30.930.10 12 319 3.4E-71 T 22-04-2016 VP2838 f04588872ef17d39faf46cc9c3f61218 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.259 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VP2838 f04588872ef17d39faf46cc9c3f61218 323 SUPERFAMILY SSF55681 11 320 1.07E-80 T 22-04-2016 VP2838 f04588872ef17d39faf46cc9c3f61218 323 PANTHER PTHR22594:SF7 10 319 3.8E-144 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VP2838 f04588872ef17d39faf46cc9c3f61218 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 2.8E-128 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VP2838 f04588872ef17d39faf46cc9c3f61218 323 PANTHER PTHR22594 10 319 3.8E-144 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 PANTHER PTHR30537 1 297 2.0E-100 T 22-04-2016 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 SUPERFAMILY SSF46785 6 87 2.83E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 Pfam PF03466 LysR substrate binding domain 91 295 4.3E-36 T 22-04-2016 IPR005119 LysR, substrate-binding VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 PANTHER PTHR30537:SF5 1 297 2.0E-100 T 22-04-2016 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 Gene3D G3DSA:1.10.10.10 6 83 4.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 Gene3D G3DSA:3.40.190.10 91 178 1.4E-7 T 22-04-2016 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 SUPERFAMILY SSF53850 90 297 1.16E-40 T 22-04-2016 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2008 cb913cee7d5862ecdfaf8ded69277b7f 298 Gene3D G3DSA:3.40.190.10 179 263 3.3E-15 T 22-04-2016 VP2608 be246047a41d376931cdea435bb1dd1b 165 SMART SM00731 11 160 8.0E-53 T 22-04-2016 IPR006640 SprT-like VP2608 be246047a41d376931cdea435bb1dd1b 165 Pfam PF10263 SprT-like family 16 158 1.7E-27 T 22-04-2016 IPR006640 SprT-like VP2608 be246047a41d376931cdea435bb1dd1b 165 PANTHER PTHR38773 1 165 2.9E-79 T 22-04-2016 VP2608 be246047a41d376931cdea435bb1dd1b 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.321 T 22-04-2016 IPR023483 Uncharacterised protein family SprT VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 PANTHER PTHR18964:SF128 61 286 4.6E-191 T 22-04-2016 VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 PANTHER PTHR18964:SF128 304 401 4.6E-191 T 22-04-2016 VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 PANTHER PTHR18964 61 286 4.6E-191 T 22-04-2016 VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 PANTHER PTHR18964 304 401 4.6E-191 T 22-04-2016 VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 Pfam PF00480 ROK family 86 390 1.9E-76 T 22-04-2016 IPR000600 ROK family VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:3.30.420.40 83 221 1.9E-35 T 22-04-2016 VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:1.10.10.10 11 78 4.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 22-04-2016 IPR000600 ROK family VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:3.30.420.40 222 374 4.7E-47 T 22-04-2016 VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 SUPERFAMILY SSF46785 11 75 6.18E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0828 d35787e7b14bd4f46dd0418a543fe4fe 404 SUPERFAMILY SSF53067 85 391 1.94E-56 T 22-04-2016 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.6E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 22-04-2016 IPR011032 GroES-like VP2852 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 1.5E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP2852 1aacc99d68a55f38a625f224dca7cfba 96 PANTHER PTHR10772 1 96 1.0E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 PIRSF PIRSF000194 1 160 4.5E-62 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 PRINTS PR00070 Dihydrofolate reductase signature 92 106 3.0E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 3.0E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 3.0E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 3.0E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 Gene3D G3DSA:3.40.430.10 1 159 9.2E-62 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 SUPERFAMILY SSF53597 1 159 1.82E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 Pfam PF00186 Dihydrofolate reductase 3 159 8.8E-61 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 PANTHER PTHR22778:SF16 1 160 1.2E-45 T 22-04-2016 VP0333 356a8646bb314583c4cc7f4197ad8fc8 160 PANTHER PTHR22778 1 160 1.2E-45 T 22-04-2016 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 Gene3D G3DSA:3.40.192.10 7 140 5.2E-50 T 22-04-2016 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 SUPERFAMILY SSF53223 1 122 5.08E-40 T 22-04-2016 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 6.9E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 PANTHER PTHR10025 1 286 4.3E-176 T 22-04-2016 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.0E-69 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.077 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 SUPERFAMILY SSF51735 123 280 4.63E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0879 ca80f34bafd823a1039694b7ed7bea5d 286 Gene3D G3DSA:3.40.50.720 141 264 4.1E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1196 9b0381e8d7521a3076d566dbba209ea9 386 PANTHER PTHR30006 3 212 2.6E-148 T 22-04-2016 VP1196 9b0381e8d7521a3076d566dbba209ea9 386 PANTHER PTHR30006 230 386 2.6E-148 T 22-04-2016 VP1196 9b0381e8d7521a3076d566dbba209ea9 386 SUPERFAMILY SSF53850 38 384 3.0E-40 T 22-04-2016 VP1196 9b0381e8d7521a3076d566dbba209ea9 386 PIRSF PIRSF029172 1 386 7.1E-179 T 22-04-2016 IPR027020 Protein ynjB VP1196 9b0381e8d7521a3076d566dbba209ea9 386 PANTHER PTHR30006:SF12 3 212 2.6E-148 T 22-04-2016 VP1196 9b0381e8d7521a3076d566dbba209ea9 386 PANTHER PTHR30006:SF12 230 386 2.6E-148 T 22-04-2016 VP1196 9b0381e8d7521a3076d566dbba209ea9 386 Gene3D G3DSA:3.40.190.10 160 319 1.1E-9 T 22-04-2016 VP1196 9b0381e8d7521a3076d566dbba209ea9 386 Pfam PF13416 Bacterial extracellular solute-binding protein 61 352 5.6E-22 T 22-04-2016 VP1196 9b0381e8d7521a3076d566dbba209ea9 386 Gene3D G3DSA:3.40.190.10 37 157 4.3E-19 T 22-04-2016 VP1196 9b0381e8d7521a3076d566dbba209ea9 386 Gene3D G3DSA:3.40.190.10 320 360 4.3E-19 T 22-04-2016 VP2488 8e7784333f86dd1c537aac52253228ee 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 5.1E-26 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 PANTHER PTHR22573:SF2 1 468 5.5E-131 T 22-04-2016 VP2488 8e7784333f86dd1c537aac52253228ee 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 4.7E-37 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 SUPERFAMILY SSF55957 374 466 1.44E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 SUPERFAMILY SSF53738 2 187 9.62E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 Gene3D G3DSA:3.30.310.50 395 468 8.2E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 Gene3D G3DSA:3.40.120.10 181 255 1.3E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 PANTHER PTHR22573 1 468 5.5E-131 T 22-04-2016 VP2488 8e7784333f86dd1c537aac52253228ee 470 Gene3D G3DSA:3.40.120.10 256 382 3.7E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 Gene3D G3DSA:3.40.120.10 2 179 2.0E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 SUPERFAMILY SSF53738 250 379 2.0E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 7.0E-10 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP2488 8e7784333f86dd1c537aac52253228ee 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.6E-24 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP1524 c81be0f3c084e807f0bbf532158ed392 241 Pfam PF02146 Sir2 family 13 186 8.5E-50 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 VP1524 c81be0f3c084e807f0bbf532158ed392 241 PANTHER PTHR11085 6 234 6.5E-79 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 VP1524 c81be0f3c084e807f0bbf532158ed392 241 Gene3D G3DSA:3.40.50.1220 71 113 8.2E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP1524 c81be0f3c084e807f0bbf532158ed392 241 Gene3D G3DSA:3.40.50.1220 6 21 8.2E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP1524 c81be0f3c084e807f0bbf532158ed392 241 Gene3D G3DSA:3.40.50.1220 165 231 8.2E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP1524 c81be0f3c084e807f0bbf532158ed392 241 PANTHER PTHR11085:SF17 6 234 6.5E-79 T 22-04-2016 VP1524 c81be0f3c084e807f0bbf532158ed392 241 SUPERFAMILY SSF52467 6 234 2.31E-72 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP1524 c81be0f3c084e807f0bbf532158ed392 241 Gene3D G3DSA:3.30.1600.10 22 61 2.6E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain VP1524 c81be0f3c084e807f0bbf532158ed392 241 Gene3D G3DSA:3.30.1600.10 114 158 2.6E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain VP1524 c81be0f3c084e807f0bbf532158ed392 241 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.997 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 VP1236 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Gene3D G3DSA:3.40.50.10490 96 270 1.3E-36 T 22-04-2016 VP1236 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 PANTHER PTHR30514:SF7 1 271 1.3E-194 T 22-04-2016 VP1236 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 PANTHER PTHR30514 1 271 1.3E-194 T 22-04-2016 VP1236 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Pfam PF01380 SIS domain 124 252 4.4E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VP1236 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Gene3D G3DSA:1.10.10.10 1 80 2.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1236 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 SUPERFAMILY SSF53697 93 278 3.24E-39 T 22-04-2016 VP1236 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1236 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-28 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 PANTHER PTHR21089:SF3 270 357 3.1E-141 T 22-04-2016 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 PANTHER PTHR21089:SF3 67 254 3.1E-141 T 22-04-2016 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 SUPERFAMILY SSF69742 1 156 5.62E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 6.3E-24 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 SUPERFAMILY SSF51735 160 313 1.12E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 9.5E-145 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 PANTHER PTHR21089 270 357 3.1E-141 T 22-04-2016 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 PANTHER PTHR21089 67 254 3.1E-141 T 22-04-2016 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.747 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 Gene3D G3DSA:3.40.50.720 181 356 4.0E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 SUPERFAMILY SSF69075 315 416 3.66E-29 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.3E-50 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 PIRSF PIRSF000445 1 418 5.0E-157 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VP0742 eba9b6108a9f31c8dc0e114a5e78c637 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.9E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 6.1E-77 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.749 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.4E-107 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 PANTHER PTHR10055 2 338 2.4E-178 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 SUPERFAMILY SSF52374 5 334 1.84E-90 T 22-04-2016 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 Gene3D G3DSA:1.10.240.10 209 327 3.9E-18 T 22-04-2016 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 Gene3D G3DSA:3.40.50.620 4 208 4.2E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 PANTHER PTHR10055:SF10 2 338 2.4E-178 T 22-04-2016 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP2804 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.0E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 PANTHER PTHR30465:SF65 171 314 7.8E-152 T 22-04-2016 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 PANTHER PTHR30465:SF65 1 146 7.8E-152 T 22-04-2016 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 Gene3D G3DSA:1.10.3720.10 71 140 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 Gene3D G3DSA:1.10.3720.10 180 306 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 SUPERFAMILY SSF161098 69 137 1.18E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 SUPERFAMILY SSF161098 177 298 1.18E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 PANTHER PTHR30465 171 314 7.8E-152 T 22-04-2016 VP1170 14969c5bd594a9abc5da7c9d6cbb065d 320 PANTHER PTHR30465 1 146 7.8E-152 T 22-04-2016 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 SUPERFAMILY SSF54211 594 769 2.2E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.035 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 Gene3D G3DSA:3.40.50.300 310 499 3.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 SMART SM00464 10 201 1.4E-76 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 5.3E-41 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.0E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 Gene3D G3DSA:1.10.8.60 500 583 3.2E-33 T 22-04-2016 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 PANTHER PTHR10046:SF43 8 775 0.0 T 22-04-2016 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 3.0E-100 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 SUPERFAMILY SSF88697 10 200 1.74E-48 T 22-04-2016 IPR015947 PUA-like domain VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 PANTHER PTHR10046 8 775 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.3E-56 T 22-04-2016 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.3E-56 T 22-04-2016 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.3E-56 T 22-04-2016 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.3E-56 T 22-04-2016 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.3E-56 T 22-04-2016 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 PIRSF PIRSF001174 1 774 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 SUPERFAMILY SSF52540 312 586 1.83E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 SMART SM00382 347 491 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VP0919 6f7438dbbef2c6e2ac1c0462b72767a6 783 Gene3D G3DSA:3.30.230.10 589 770 1.2E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0579 707c1d66d0c25cf17ac11ca7bf4560cb 247 PANTHER PTHR12598 5 247 2.5E-97 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VP0579 707c1d66d0c25cf17ac11ca7bf4560cb 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 247 41.692 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VP0579 707c1d66d0c25cf17ac11ca7bf4560cb 247 Pfam PF03932 CutC family 4 205 5.2E-83 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VP0579 707c1d66d0c25cf17ac11ca7bf4560cb 247 Gene3D G3DSA:3.20.20.380 4 246 4.6E-90 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VP0579 707c1d66d0c25cf17ac11ca7bf4560cb 247 SUPERFAMILY SSF110395 4 247 1.57E-73 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VP0579 707c1d66d0c25cf17ac11ca7bf4560cb 247 PANTHER PTHR12598:SF0 5 247 2.5E-97 T 22-04-2016 VP1294 936458ad6b1d021333851a8406ab6d6d 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.2E-50 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VP1294 936458ad6b1d021333851a8406ab6d6d 98 Gene3D G3DSA:4.10.520.10 2 93 6.7E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VP1294 936458ad6b1d021333851a8406ab6d6d 98 PANTHER PTHR33175:SF2 2 98 4.9E-53 T 22-04-2016 VP1294 936458ad6b1d021333851a8406ab6d6d 98 PANTHER PTHR33175 2 98 4.9E-53 T 22-04-2016 VP1294 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP1294 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP1294 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP1294 936458ad6b1d021333851a8406ab6d6d 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VP1294 936458ad6b1d021333851a8406ab6d6d 98 SMART SM00411 3 92 1.6E-40 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP1294 936458ad6b1d021333851a8406ab6d6d 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP1294 936458ad6b1d021333851a8406ab6d6d 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.604 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VP1294 936458ad6b1d021333851a8406ab6d6d 98 SUPERFAMILY SSF47729 3 95 3.53E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VP1172 8fa01dc5017886c070b1842de5822990 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 330 3.4E-166 T 22-04-2016 IPR014317 Transcription activator PspF VP1172 8fa01dc5017886c070b1842de5822990 336 Gene3D G3DSA:1.10.10.60 268 332 6.4E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1172 8fa01dc5017886c070b1842de5822990 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP1172 8fa01dc5017886c070b1842de5822990 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP1172 8fa01dc5017886c070b1842de5822990 336 Gene3D G3DSA:1.10.8.60 177 238 4.0E-22 T 22-04-2016 VP1172 8fa01dc5017886c070b1842de5822990 336 SUPERFAMILY SSF52540 4 237 1.77E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1172 8fa01dc5017886c070b1842de5822990 336 Pfam PF02954 Bacterial regulatory protein, Fis family 296 324 4.4E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1172 8fa01dc5017886c070b1842de5822990 336 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 6.0E-5 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 VP1172 8fa01dc5017886c070b1842de5822990 336 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 6.0E-5 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 VP1172 8fa01dc5017886c070b1842de5822990 336 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 6.0E-5 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 VP1172 8fa01dc5017886c070b1842de5822990 336 PANTHER PTHR32071 1 333 3.2E-209 T 22-04-2016 VP1172 8fa01dc5017886c070b1842de5822990 336 PANTHER PTHR32071:SF38 1 333 3.2E-209 T 22-04-2016 VP1172 8fa01dc5017886c070b1842de5822990 336 SMART SM00382 25 177 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1172 8fa01dc5017886c070b1842de5822990 336 Gene3D G3DSA:3.40.50.300 3 176 4.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1172 8fa01dc5017886c070b1842de5822990 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 2.0E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1172 8fa01dc5017886c070b1842de5822990 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 2.0E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1172 8fa01dc5017886c070b1842de5822990 336 Pfam PF00158 Sigma-54 interaction domain 5 167 1.9E-57 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP1172 8fa01dc5017886c070b1842de5822990 336 SUPERFAMILY SSF46689 278 332 7.17E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2444 958f21ccd976c5c10b22e2042accfa80 167 SUPERFAMILY SSF55729 1 127 5.65E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2444 958f21ccd976c5c10b22e2042accfa80 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 2.0E-9 T 22-04-2016 VP2444 958f21ccd976c5c10b22e2042accfa80 167 Gene3D G3DSA:3.40.630.30 1 125 6.0E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2444 958f21ccd976c5c10b22e2042accfa80 167 PANTHER PTHR23091 1 164 9.9E-24 T 22-04-2016 VP2444 958f21ccd976c5c10b22e2042accfa80 167 PANTHER PTHR23091:SF237 1 164 9.9E-24 T 22-04-2016 VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Gene3D G3DSA:3.90.1310.10 132 254 2.1E-39 T 22-04-2016 VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 5.0E-52 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 PANTHER PTHR30627:SF2 7 638 2.7E-264 T 22-04-2016 VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 3.7E-240 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Gene3D G3DSA:3.40.710.10 256 619 1.4E-102 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 3.1E-73 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 SUPERFAMILY SSF56519 58 254 2.49E-56 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 PANTHER PTHR30627 7 638 2.7E-264 T 22-04-2016 VP0722 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 SUPERFAMILY SSF56601 256 619 2.54E-96 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 PANTHER PTHR24423:SF474 161 419 8.4E-30 T 22-04-2016 VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 PANTHER PTHR24423:SF474 1 12 8.4E-30 T 22-04-2016 VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 SMART SM00388 224 289 8.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 SMART SM00387 333 423 3.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 Gene3D G3DSA:1.10.287.130 217 284 2.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 Gene3D G3DSA:3.30.565.10 302 425 2.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 SUPERFAMILY SSF55874 280 419 2.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 PANTHER PTHR24423 161 419 8.4E-30 T 22-04-2016 VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 PANTHER PTHR24423 1 12 8.4E-30 T 22-04-2016 VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 420 3.8E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 287 7.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1984 ebbe8caabbe7157590ab5e25cebfbf50 434 SUPERFAMILY SSF47384 207 289 1.75E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0110 15d956aac024caf43a9d7a215134baf2 205 Gene3D G3DSA:1.10.760.10 132 203 1.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0110 15d956aac024caf43a9d7a215134baf2 205 Gene3D G3DSA:1.10.760.10 29 131 2.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0110 15d956aac024caf43a9d7a215134baf2 205 PIRSF PIRSF000005 1 205 1.1E-66 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VP0110 15d956aac024caf43a9d7a215134baf2 205 SUPERFAMILY SSF46626 6 106 1.38E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0110 15d956aac024caf43a9d7a215134baf2 205 PANTHER PTHR33751 1 205 6.4E-78 T 22-04-2016 VP0110 15d956aac024caf43a9d7a215134baf2 205 PANTHER PTHR33751:SF3 1 205 6.4E-78 T 22-04-2016 VP0110 15d956aac024caf43a9d7a215134baf2 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 6.6E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VP0110 15d956aac024caf43a9d7a215134baf2 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 6.6E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VP0110 15d956aac024caf43a9d7a215134baf2 205 Pfam PF00034 Cytochrome c 116 201 9.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0110 15d956aac024caf43a9d7a215134baf2 205 Pfam PF00034 Cytochrome c 25 103 3.4E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0110 15d956aac024caf43a9d7a215134baf2 205 SUPERFAMILY SSF46626 114 203 3.25E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 Gene3D G3DSA:3.40.980.10 6 166 9.0E-51 T 22-04-2016 IPR001453 MoaB/Mog domain VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 PIRSF PIRSF006443 1 166 9.0E-67 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 3.2E-37 T 22-04-2016 IPR001453 MoaB/Mog domain VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 PANTHER PTHR10192 4 168 7.4E-99 T 22-04-2016 VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 SUPERFAMILY SSF53218 7 168 2.75E-47 T 22-04-2016 IPR001453 MoaB/Mog domain VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 SMART SM00852 14 158 8.0E-28 T 22-04-2016 IPR001453 MoaB/Mog domain VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 PANTHER PTHR10192:SF18 4 168 7.4E-99 T 22-04-2016 VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.4E-85 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 VP2095 b7ce3952d7a10a1a4d26c43514f32c4b 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.1E-34 T 22-04-2016 IPR001453 MoaB/Mog domain VP0708 fcdce20fb519505667b4454bbcbf9142 183 PIRSF PIRSF004682 1 183 2.9E-63 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VP0708 fcdce20fb519505667b4454bbcbf9142 183 PANTHER PTHR23133:SF3 1 183 1.5E-71 T 22-04-2016 VP0708 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.7E-79 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VP0708 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 2.3E-35 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VP0708 fcdce20fb519505667b4454bbcbf9142 183 PANTHER PTHR23133 1 183 1.5E-71 T 22-04-2016 VP0708 fcdce20fb519505667b4454bbcbf9142 183 Gene3D G3DSA:3.40.50.1000 3 181 1.4E-59 T 22-04-2016 IPR023214 HAD-like domain VP0708 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-38 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VP0708 fcdce20fb519505667b4454bbcbf9142 183 SUPERFAMILY SSF56784 4 182 2.13E-48 T 22-04-2016 IPR023214 HAD-like domain VP0708 fcdce20fb519505667b4454bbcbf9142 183 Pfam PF13242 HAD-hyrolase-like 107 176 1.2E-12 T 22-04-2016 VP1735 42bad803a7557b07338cb65d8f8b0594 476 PANTHER PTHR24423:SF474 201 475 2.7E-67 T 22-04-2016 VP1735 42bad803a7557b07338cb65d8f8b0594 476 PANTHER PTHR24423:SF474 2 13 2.7E-67 T 22-04-2016 VP1735 42bad803a7557b07338cb65d8f8b0594 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1735 42bad803a7557b07338cb65d8f8b0594 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1735 42bad803a7557b07338cb65d8f8b0594 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 7.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1735 42bad803a7557b07338cb65d8f8b0594 476 SMART SM00387 368 476 1.0E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1735 42bad803a7557b07338cb65d8f8b0594 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 324 1.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1735 42bad803a7557b07338cb65d8f8b0594 476 Pfam PF08521 Two-component sensor kinase N-terminal 29 183 3.1E-7 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal VP1735 42bad803a7557b07338cb65d8f8b0594 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 474 3.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1735 42bad803a7557b07338cb65d8f8b0594 476 SUPERFAMILY SSF47384 243 324 1.96E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1735 42bad803a7557b07338cb65d8f8b0594 476 Gene3D G3DSA:3.30.565.10 330 475 1.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1735 42bad803a7557b07338cb65d8f8b0594 476 SUPERFAMILY SSF55874 315 475 1.23E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1735 42bad803a7557b07338cb65d8f8b0594 476 PANTHER PTHR24423 201 475 2.7E-67 T 22-04-2016 VP1735 42bad803a7557b07338cb65d8f8b0594 476 PANTHER PTHR24423 2 13 2.7E-67 T 22-04-2016 VP1735 42bad803a7557b07338cb65d8f8b0594 476 SMART SM00388 260 325 5.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1735 42bad803a7557b07338cb65d8f8b0594 476 Gene3D G3DSA:1.10.287.130 252 321 1.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 SUPERFAMILY SSF47188 3 131 1.44E-25 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 132 3.9E-31 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 PANTHER PTHR10799 239 368 9.3E-28 T 22-04-2016 VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 1.3E-46 T 22-04-2016 IPR000160 GGDEF domain VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 2.3E-7 T 22-04-2016 IPR012312 Haemerythrin-like VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 1.1E-42 T 22-04-2016 IPR000160 GGDEF domain VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 SMART SM00267 195 367 8.7E-48 T 22-04-2016 IPR000160 GGDEF domain VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 SUPERFAMILY SSF55073 211 366 8.63E-44 T 22-04-2016 IPR029787 Nucleotide cyclase VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 PANTHER PTHR10799:SF750 1 40 9.3E-28 T 22-04-2016 VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 PANTHER PTHR10799 1 40 9.3E-28 T 22-04-2016 VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 PANTHER PTHR10799:SF750 239 368 9.3E-28 T 22-04-2016 VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 Gene3D G3DSA:3.30.70.270 208 369 5.4E-46 T 22-04-2016 VP1289 bca8cbc6e4648c4f945725278af4c7a2 381 Gene3D G3DSA:1.20.120.50 3 131 2.1E-27 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VP0061 9ee5c3026ee376dcf72f42928aafd998 109 Pfam PF00893 Small Multidrug Resistance protein 7 99 6.6E-19 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 VP0061 9ee5c3026ee376dcf72f42928aafd998 109 PANTHER PTHR30561 7 107 7.3E-23 T 22-04-2016 VP0061 9ee5c3026ee376dcf72f42928aafd998 109 PANTHER PTHR30561:SF6 7 107 7.3E-23 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 VP0061 9ee5c3026ee376dcf72f42928aafd998 109 SUPERFAMILY SSF103481 12 107 5.89E-15 T 22-04-2016 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 Gene3D G3DSA:3.90.1150.10 322 410 2.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 Gene3D G3DSA:3.90.1150.10 4 54 2.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 4.8E-206 T 22-04-2016 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 Gene3D G3DSA:3.40.640.10 55 309 7.7E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 3.8E-150 T 22-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 PANTHER PTHR11986:SF61 8 417 4.3E-225 T 22-04-2016 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 PANTHER PTHR11986 8 417 4.3E-225 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 SUPERFAMILY SSF53383 7 410 2.74E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 Pfam PF00202 Aminotransferase class-III 16 409 9.8E-79 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1721 b0876b1ccb5cc2750729fc667a3f7c12 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 SUPERFAMILY SSF51230 203 295 2.49E-23 T 22-04-2016 IPR011053 Single hybrid motif VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Gene3D G3DSA:3.30.559.10 386 627 4.0E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 SUPERFAMILY SSF51230 104 196 8.25E-23 T 22-04-2016 IPR011053 Single hybrid motif VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Gene3D G3DSA:4.10.320.10 317 362 6.8E-21 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 182 627 4.0E-207 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Gene3D G3DSA:2.40.50.100 205 279 1.2E-21 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Gene3D G3DSA:2.40.50.100 106 181 5.5E-21 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 PANTHER PTHR23151 21 110 1.1E-262 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 PANTHER PTHR23151 379 627 1.1E-262 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 PANTHER PTHR23151 202 362 1.1E-262 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Pfam PF02817 e3 binding domain 322 356 3.1E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 SUPERFAMILY SSF51230 1 94 6.02E-24 T 22-04-2016 IPR011053 Single hybrid motif VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 396 626 5.2E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 PANTHER PTHR23151:SF68 21 110 1.1E-262 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 PANTHER PTHR23151:SF68 379 627 1.1E-262 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 PANTHER PTHR23151:SF68 202 362 1.1E-262 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 SUPERFAMILY SSF47005 315 360 6.54E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Gene3D G3DSA:2.40.50.100 1 94 5.2E-23 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 SUPERFAMILY SSF52777 385 626 3.47E-81 T 22-04-2016 VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Pfam PF00364 Biotin-requiring enzyme 105 175 3.2E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Pfam PF00364 Biotin-requiring enzyme 4 73 4.4E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VP2518 bc5fef8570b058dc15cd9b04c0f03110 627 Pfam PF00364 Biotin-requiring enzyme 204 274 2.2E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VP2783 53c8677a2022ab6f480844edf5917ba1 193 PANTHER PTHR10516 129 191 7.2E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VP2783 53c8677a2022ab6f480844edf5917ba1 193 PANTHER PTHR10516 1 83 7.2E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VP2783 53c8677a2022ab6f480844edf5917ba1 193 SUPERFAMILY SSF54534 2 138 2.16E-34 T 22-04-2016 VP2783 53c8677a2022ab6f480844edf5917ba1 193 PANTHER PTHR10516:SF316 129 191 7.2E-58 T 22-04-2016 VP2783 53c8677a2022ab6f480844edf5917ba1 193 PANTHER PTHR10516:SF316 1 83 7.2E-58 T 22-04-2016 VP2783 53c8677a2022ab6f480844edf5917ba1 193 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 2.3E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VP2783 53c8677a2022ab6f480844edf5917ba1 193 Gene3D G3DSA:3.10.50.40 2 80 3.2E-18 T 22-04-2016 VP2783 53c8677a2022ab6f480844edf5917ba1 193 Gene3D G3DSA:3.10.50.40 126 140 3.2E-18 T 22-04-2016 VP0290 174699566994b6ec9f28f6d53d04301b 651 Pfam PF02872 5'-nucleotidase, C-terminal domain 360 552 1.1E-23 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 SUPERFAMILY SSF56300 21 358 1.62E-86 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0290 174699566994b6ec9f28f6d53d04301b 651 PRINTS PR01607 Apyrase family signature 247 270 4.4E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 PRINTS PR01607 Apyrase family signature 219 236 4.4E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 PRINTS PR01607 Apyrase family signature 534 553 4.4E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 PRINTS PR01607 Apyrase family signature 26 44 4.4E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 PRINTS PR01607 Apyrase family signature 432 455 4.4E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 PRINTS PR01607 Apyrase family signature 287 307 4.4E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 PANTHER PTHR11575:SF6 1 649 0.0 T 22-04-2016 VP0290 174699566994b6ec9f28f6d53d04301b 651 SUPERFAMILY SSF55816 359 601 6.93E-36 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VP0290 174699566994b6ec9f28f6d53d04301b 651 PANTHER PTHR11575 1 649 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 Gene3D G3DSA:3.90.780.10 364 600 2.8E-40 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 Gene3D G3DSA:3.60.21.10 17 363 5.3E-96 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0290 174699566994b6ec9f28f6d53d04301b 651 Pfam PF00149 Calcineurin-like phosphoesterase 28 263 2.0E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VP0290 174699566994b6ec9f28f6d53d04301b 651 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 27 651 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VP0413 335274d6595e590ccbb2a8f5e1f738fa 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 7.3E-75 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VP0413 335274d6595e590ccbb2a8f5e1f738fa 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 2.0E-73 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VP0413 335274d6595e590ccbb2a8f5e1f738fa 267 PANTHER PTHR30622:SF4 1 265 6.6E-129 T 22-04-2016 VP0413 335274d6595e590ccbb2a8f5e1f738fa 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.561 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VP0413 335274d6595e590ccbb2a8f5e1f738fa 267 PANTHER PTHR30622 1 265 6.6E-129 T 22-04-2016 VP1051 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF47781 66 136 2.06E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VP1051 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF46929 158 203 8.89E-13 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VP1051 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF50249 2 63 4.17E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1051 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:1.10.8.10 157 204 3.7E-25 T 22-04-2016 VP1051 8770d2df336de8cc33236981df215c11 204 Pfam PF01330 RuvA N terminal domain 2 62 6.7E-21 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VP1051 8770d2df336de8cc33236981df215c11 204 SMART SM00278 108 127 0.071 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP1051 8770d2df336de8cc33236981df215c11 204 SMART SM00278 73 92 540.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP1051 8770d2df336de8cc33236981df215c11 204 PANTHER PTHR33796 2 204 1.8E-83 T 22-04-2016 VP1051 8770d2df336de8cc33236981df215c11 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 4.0E-65 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VP1051 8770d2df336de8cc33236981df215c11 204 Pfam PF07499 RuvA, C-terminal domain 160 203 2.1E-17 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VP1051 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:1.10.150.20 67 141 4.2E-29 T 22-04-2016 VP1051 8770d2df336de8cc33236981df215c11 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 6.4E-14 T 22-04-2016 VP1051 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:2.40.50.140 2 65 3.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1051 8770d2df336de8cc33236981df215c11 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.777 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 SUPERFAMILY SSF54631 151 278 6.25E-27 T 22-04-2016 VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 PANTHER PTHR11911 144 454 9.9E-42 T 22-04-2016 VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 SMART SM00116 233 280 5.2E-6 T 22-04-2016 IPR000644 CBS domain VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 SMART SM00116 159 216 8.4E-5 T 22-04-2016 IPR000644 CBS domain VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 Gene3D G3DSA:2.60.120.10 10 137 7.6E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 5.0E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 SMART SM00100 17 134 3.9E-7 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.9E-47 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 Gene3D G3DSA:3.10.580.10 151 281 3.3E-30 T 22-04-2016 VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 Pfam PF00571 CBS domain 226 278 3.4E-9 T 22-04-2016 IPR000644 CBS domain VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 Pfam PF00571 CBS domain 156 214 9.1E-7 T 22-04-2016 IPR000644 CBS domain VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 3.9E-46 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 PANTHER PTHR11911:SF110 144 454 9.9E-42 T 22-04-2016 VP1902 3ee18f8cfe7caff16b2c522c3d30479a 629 SUPERFAMILY SSF51206 7 135 9.69E-29 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP1479 4d4282d7140ec190eb5471ca27eaab83 456 PANTHER PTHR11206:SF153 2 446 5.2E-214 T 22-04-2016 VP1479 4d4282d7140ec190eb5471ca27eaab83 456 PANTHER PTHR11206 2 446 5.2E-214 T 22-04-2016 VP1479 4d4282d7140ec190eb5471ca27eaab83 456 Pfam PF01554 MatE 243 404 7.6E-39 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1479 4d4282d7140ec190eb5471ca27eaab83 456 Pfam PF01554 MatE 17 176 1.5E-36 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1479 4d4282d7140ec190eb5471ca27eaab83 456 PIRSF PIRSF006603 5 452 4.3E-65 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1479 4d4282d7140ec190eb5471ca27eaab83 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 8.6E-125 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP0657 290647c15937a7aacddd8e327ed4c453 185 SUPERFAMILY SSF54523 19 161 5.49E-14 T 22-04-2016 VP0657 290647c15937a7aacddd8e327ed4c453 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 1.9E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0657 290647c15937a7aacddd8e327ed4c453 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0657 290647c15937a7aacddd8e327ed4c453 185 PIRSF PIRSF024622 1 185 1.0E-90 T 22-04-2016 IPR016824 Tfp pilus assembly protein FimT VP0657 290647c15937a7aacddd8e327ed4c453 185 Pfam PF13633 Prokaryotic N-terminal methylation site 17 41 1.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0657 290647c15937a7aacddd8e327ed4c453 185 Pfam PF12019 Type II transport protein GspH 55 160 6.4E-6 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VP0657 290647c15937a7aacddd8e327ed4c453 185 Gene3D G3DSA:3.30.700.10 19 59 1.5E-4 T 22-04-2016 VP0404 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88946 115 453 1.57E-95 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.10.10 459 510 1.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0404 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04545 Sigma-70, region 4 554 607 1.5E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 45.744 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04546 Sigma-70, non-essential region 139 355 5.4E-67 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.10.10 551 619 5.7E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0404 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 2.5E-28 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VP0404 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.1E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 6.0E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PANTHER PTHR30603 333 619 7.9E-250 T 22-04-2016 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PANTHER PTHR30603 1 152 7.9E-250 T 22-04-2016 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PANTHER PTHR30603:SF0 333 619 7.9E-250 T 22-04-2016 VP0404 559a01d407bf0f0177dd5776985f09e0 620 PANTHER PTHR30603:SF0 1 152 7.9E-250 T 22-04-2016 VP0404 559a01d407bf0f0177dd5776985f09e0 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.2E-120 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88659 516 618 9.38E-26 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0404 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.601.10 112 455 7.8E-133 T 22-04-2016 VP1695 bc09b5815a3ee8dad41ae017492ac5b6 433 Gene3D G3DSA:2.60.200.20 3 96 1.5E-6 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VP1695 bc09b5815a3ee8dad41ae017492ac5b6 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 8.7E-128 T 22-04-2016 IPR032034 Yop protein translocation protein D, periplasmic domain VP1695 bc09b5815a3ee8dad41ae017492ac5b6 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 5.2E-129 T 22-04-2016 IPR012843 Type III secretion system YscD/HrpQ VP1695 bc09b5815a3ee8dad41ae017492ac5b6 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 7.4E-20 T 22-04-2016 IPR032030 YscD, cytoplasmic domain VP1733 b9da6b9ba5447dafc324fc6d92e58204 190 SUPERFAMILY SSF48452 29 160 2.94E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1733 b9da6b9ba5447dafc324fc6d92e58204 190 Gene3D G3DSA:1.25.40.10 28 167 1.1E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1733 b9da6b9ba5447dafc324fc6d92e58204 190 Pfam PF13181 Tetratricopeptide repeat 116 134 0.03 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 PANTHER PTHR10072:SF37 1 99 1.3E-86 T 22-04-2016 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 PANTHER PTHR10072:SF37 149 191 1.3E-86 T 22-04-2016 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.291 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 Pfam PF01106 NifU-like domain 113 180 9.5E-19 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 Gene3D G3DSA:2.60.300.12 3 99 8.0E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 1.0E-27 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 PANTHER PTHR10072 149 191 1.3E-86 T 22-04-2016 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 100 8.1E-13 T 22-04-2016 IPR000361 FeS cluster biogenesis VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 PANTHER PTHR10072 1 99 1.3E-86 T 22-04-2016 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 2.3E-95 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 SUPERFAMILY SSF89360 3 99 4.71E-22 T 22-04-2016 IPR000361 FeS cluster biogenesis VP0146 ea27fb9f683cc1d154213bcdc72ff52d 194 SUPERFAMILY SSF117916 97 187 3.27E-22 T 22-04-2016 VP2321 063a4f7421bfb33a532cc989b6a25d16 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 1.0E-67 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VP2321 063a4f7421bfb33a532cc989b6a25d16 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.323 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VP2321 063a4f7421bfb33a532cc989b6a25d16 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 2.6E-56 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 2.4E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 Gene3D G3DSA:3.40.1500.10 6 305 9.2E-136 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.736 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 PRINTS PR00073 Coprogen oxidase signature 94 118 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 PRINTS PR00073 Coprogen oxidase signature 129 151 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 PRINTS PR00073 Coprogen oxidase signature 238 265 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 PRINTS PR00073 Coprogen oxidase signature 31 47 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 PRINTS PR00073 Coprogen oxidase signature 166 195 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 PRINTS PR00073 Coprogen oxidase signature 266 292 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 PIRSF PIRSF000166 2 305 3.7E-128 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 SUPERFAMILY SSF102886 6 305 4.71E-137 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP3034 de59c94cd967b0750c29040a61ed4e9b 305 PANTHER PTHR10755 6 305 2.3E-181 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 Gene3D G3DSA:1.10.1740.10 9 118 1.5E-25 T 22-04-2016 VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 SUPERFAMILY SSF88946 8 118 3.14E-26 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 Gene3D G3DSA:1.10.10.10 127 189 2.8E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 Pfam PF04542 Sigma-70 region 2 34 99 3.7E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 Pfam PF04545 Sigma-70, region 4 139 187 2.0E-13 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 PANTHER PTHR30173 3 192 1.1E-60 T 22-04-2016 VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 PANTHER PTHR30173:SF31 3 192 1.1E-60 T 22-04-2016 VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 SUPERFAMILY SSF88659 127 189 1.35E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2358 9ad3dc4648c1afa8e4900907143cca8e 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 3.3E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 SUPERFAMILY SSF47729 1 91 2.5E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 PANTHER PTHR33175 1 91 2.5E-50 T 22-04-2016 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.541 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 Gene3D G3DSA:4.10.520.10 1 91 5.3E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 SMART SM00411 1 91 4.4E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.8E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.8E-49 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VP2029 bce0b793b3c3290714a7577bcad9e3bc 93 PANTHER PTHR33175:SF5 1 91 2.5E-50 T 22-04-2016 VP1008 940c2494e2b5dadd765c48a0a5b92966 359 Pfam PF13609 Gram-negative porin 39 340 4.9E-28 T 22-04-2016 VP1008 940c2494e2b5dadd765c48a0a5b92966 359 SUPERFAMILY SSF56935 55 359 6.41E-31 T 22-04-2016 VP1008 940c2494e2b5dadd765c48a0a5b92966 359 Gene3D G3DSA:2.40.160.10 62 359 4.0E-39 T 22-04-2016 IPR023614 Porin domain VP3051 1a6f5f4664afb0b39f1af5313f3bc085 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-39 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 VP3051 1a6f5f4664afb0b39f1af5313f3bc085 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.3E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 VP2988 321b3622c7d57dc4ab730c13b658e941 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.326 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.3E-79 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 Gene3D G3DSA:3.40.190.10 4 111 2.8E-49 T 22-04-2016 VP2988 321b3622c7d57dc4ab730c13b658e941 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 SUPERFAMILY SSF54782 221 310 9.02E-28 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 Gene3D G3DSA:3.40.190.10 112 200 4.9E-40 T 22-04-2016 VP2988 321b3622c7d57dc4ab730c13b658e941 312 SUPERFAMILY SSF53850 6 220 6.62E-86 T 22-04-2016 VP2988 321b3622c7d57dc4ab730c13b658e941 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 3.8E-20 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 PIRSF PIRSF001438 1 312 2.3E-122 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 PANTHER PTHR11557 7 312 4.0E-165 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.4E-115 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP2988 321b3622c7d57dc4ab730c13b658e941 312 Gene3D G3DSA:3.30.160.40 222 306 2.0E-26 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0842 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:1.10.580.10 52 280 8.4E-100 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VP0842 f6d2b6c61548323072a558e096bca298 429 SUPERFAMILY SSF48256 4 428 9.68E-170 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 PIRSF PIRSF001369 38 429 9.4E-174 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VP0842 f6d2b6c61548323072a558e096bca298 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VP0842 f6d2b6c61548323072a558e096bca298 429 PANTHER PTHR11739 39 429 2.6E-207 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 2.6E-135 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 2.3E-238 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 VP0842 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 379 393 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 296 316 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 359 375 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 219 234 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 165 178 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 241 269 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VP0842 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:1.10.230.10 281 373 1.3E-44 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VP1619 ec45b659943832c239ded0c33be2d9fc 306 PANTHER PTHR35330 1 229 1.1E-57 T 22-04-2016 VP1619 ec45b659943832c239ded0c33be2d9fc 306 Gene3D G3DSA:1.10.8.210 150 207 5.2E-20 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VP1619 ec45b659943832c239ded0c33be2d9fc 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 200 4.5E-63 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VP1619 ec45b659943832c239ded0c33be2d9fc 306 Gene3D G3DSA:3.40.50.720 1 113 1.5E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1619 ec45b659943832c239ded0c33be2d9fc 306 Gene3D G3DSA:3.30.160.110 114 149 4.4E-18 T 22-04-2016 VP1619 ec45b659943832c239ded0c33be2d9fc 306 Pfam PF13241 Putative NAD(P)-binding 6 116 1.6E-31 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VP1619 ec45b659943832c239ded0c33be2d9fc 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.0E-7 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VP1619 ec45b659943832c239ded0c33be2d9fc 306 SUPERFAMILY SSF75615 109 206 3.4E-26 T 22-04-2016 VP1619 ec45b659943832c239ded0c33be2d9fc 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 198 3.2E-13 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VP1619 ec45b659943832c239ded0c33be2d9fc 306 SUPERFAMILY SSF51735 1 113 2.67E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 PANTHER PTHR30183:SF2 407 541 2.7E-271 T 22-04-2016 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 PANTHER PTHR30183:SF2 2 390 2.7E-271 T 22-04-2016 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 SUPERFAMILY SSF161098 8 257 1.83E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 Gene3D G3DSA:1.10.3720.10 284 536 3.0E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 Gene3D G3DSA:1.10.3720.10 11 263 6.2E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 PANTHER PTHR30183 407 541 2.7E-271 T 22-04-2016 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 PANTHER PTHR30183 2 390 2.7E-271 T 22-04-2016 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 532 6.9E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 1.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2490 8808f18ffa4fd5cb67b42902d09411d6 541 SUPERFAMILY SSF161098 282 535 6.15E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1114 d445f10027c6d309e3d91f8eec322225 395 SUPERFAMILY SSF53383 13 392 1.45E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1114 d445f10027c6d309e3d91f8eec322225 395 Gene3D G3DSA:3.90.1150.10 281 390 1.4E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1114 d445f10027c6d309e3d91f8eec322225 395 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 16 392 46.126 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VP1114 d445f10027c6d309e3d91f8eec322225 395 PANTHER PTHR13693:SF53 16 392 7.9E-161 T 22-04-2016 VP1114 d445f10027c6d309e3d91f8eec322225 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VP1114 d445f10027c6d309e3d91f8eec322225 395 Pfam PF00155 Aminotransferase class I and II 54 384 1.5E-51 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VP1114 d445f10027c6d309e3d91f8eec322225 395 PANTHER PTHR13693 16 392 7.9E-161 T 22-04-2016 VP1114 d445f10027c6d309e3d91f8eec322225 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 34 388 1.2E-135 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VP1114 d445f10027c6d309e3d91f8eec322225 395 Gene3D G3DSA:3.40.640.10 71 280 2.0E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1371 54713c7591c86501f25153a091e9a8b3 200 PANTHER PTHR23029:SF1 1 195 5.5E-38 T 22-04-2016 VP1371 54713c7591c86501f25153a091e9a8b3 200 SUPERFAMILY SSF53254 1 186 3.27E-46 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VP1371 54713c7591c86501f25153a091e9a8b3 200 Gene3D G3DSA:3.40.50.1240 1 194 3.2E-47 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VP1371 54713c7591c86501f25153a091e9a8b3 200 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 VP1371 54713c7591c86501f25153a091e9a8b3 200 SMART SM00855 4 158 2.8E-19 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VP1371 54713c7591c86501f25153a091e9a8b3 200 PANTHER PTHR23029 1 195 5.5E-38 T 22-04-2016 VP1371 54713c7591c86501f25153a091e9a8b3 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 7.8E-38 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VP1371 54713c7591c86501f25153a091e9a8b3 200 PIRSF PIRSF000709 1 192 2.1E-15 T 22-04-2016 VP0276 dc8e1b2b869c12c3d75eecb65f278b23 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P VP0276 dc8e1b2b869c12c3d75eecb65f278b23 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 8.5E-51 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VP0276 dc8e1b2b869c12c3d75eecb65f278b23 144 Gene3D G3DSA:3.100.10.10 32 143 9.2E-27 T 22-04-2016 VP0276 dc8e1b2b869c12c3d75eecb65f278b23 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 9.0E-32 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P VP0276 dc8e1b2b869c12c3d75eecb65f278b23 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0276 dc8e1b2b869c12c3d75eecb65f278b23 144 PANTHER PTHR12934 1 144 2.1E-72 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VP0276 dc8e1b2b869c12c3d75eecb65f278b23 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.103 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 Gene3D G3DSA:3.40.47.10 67 236 2.7E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 SUPERFAMILY SSF53901 210 391 2.77E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 SMART SM00825 Beta-ketoacyl synthase 41 338 3.7E-9 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 Gene3D G3DSA:3.40.47.10 249 391 7.4E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 93 236 2.0E-20 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 351 3.8E-27 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 PANTHER PTHR11712 147 390 3.0E-59 T 22-04-2016 VP0884 6fcf1243c6fa1b571f84f0820d99e4ba 395 SUPERFAMILY SSF53901 7 236 8.51E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 8.1E-229 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 7.0E-123 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 SUPERFAMILY SSF53720 2 449 6.68E-125 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 PANTHER PTHR11699 1 469 3.6E-286 T 22-04-2016 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 PANTHER PTHR11699:SF197 1 469 3.6E-286 T 22-04-2016 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.521 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 Gene3D G3DSA:3.40.605.10 3 256 6.5E-78 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP2795 a656251c1f8fccd2fdd76815d8d84902 485 Gene3D G3DSA:3.40.309.10 257 442 2.5E-44 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP1223 e313f0fd75e87615e32d2f772f582b12 492 Gene3D G3DSA:3.40.50.720 1 223 2.6E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1223 e313f0fd75e87615e32d2f772f582b12 492 Pfam PF11066 Protein of unknown function (DUF2867) 333 466 1.1E-13 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 VP1223 e313f0fd75e87615e32d2f772f582b12 492 PANTHER PTHR10366:SF401 260 319 2.7E-104 T 22-04-2016 VP1223 e313f0fd75e87615e32d2f772f582b12 492 PANTHER PTHR10366:SF401 3 239 2.7E-104 T 22-04-2016 VP1223 e313f0fd75e87615e32d2f772f582b12 492 SUPERFAMILY SSF51735 1 295 1.94E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1223 e313f0fd75e87615e32d2f772f582b12 492 Pfam PF13460 NAD(P)H-binding 8 150 4.2E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1223 e313f0fd75e87615e32d2f772f582b12 492 PANTHER PTHR10366 260 319 2.7E-104 T 22-04-2016 VP1223 e313f0fd75e87615e32d2f772f582b12 492 PANTHER PTHR10366 3 239 2.7E-104 T 22-04-2016 VP2036 ff282c5a42508c6e6decda63318226cf 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 4.0E-150 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2036 ff282c5a42508c6e6decda63318226cf 1024 PANTHER PTHR32294 1 1008 0.0 T 22-04-2016 VP2036 ff282c5a42508c6e6decda63318226cf 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 1004 2.5E-9 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VP2036 ff282c5a42508c6e6decda63318226cf 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 5.2E-155 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2036 ff282c5a42508c6e6decda63318226cf 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.2 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2036 ff282c5a42508c6e6decda63318226cf 1024 SMART SM00481 4 73 8.4E-6 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VP2036 ff282c5a42508c6e6decda63318226cf 1024 Gene3D G3DSA:2.40.50.140 921 998 1.9E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2036 ff282c5a42508c6e6decda63318226cf 1024 Pfam PF14579 Helix-hairpin-helix motif 768 856 1.5E-14 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2036 ff282c5a42508c6e6decda63318226cf 1024 PANTHER PTHR32294:SF4 1 1008 0.0 T 22-04-2016 VP2036 ff282c5a42508c6e6decda63318226cf 1024 Pfam PF02811 PHP domain 8 99 2.3E-8 T 22-04-2016 IPR004013 PHP domain GO:0003824 VP0482 a54da18ee51dc735909e6139c43415a1 1487 Gene3D G3DSA:3.60.20.10 13 435 9.3E-171 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0482 a54da18ee51dc735909e6139c43415a1 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 2.9E-153 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VP0482 a54da18ee51dc735909e6139c43415a1 1487 SUPERFAMILY SSF69336 1214 1464 1.44E-87 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VP0482 a54da18ee51dc735909e6139c43415a1 1487 PANTHER PTHR11938 2 1477 0.0 T 22-04-2016 VP0482 a54da18ee51dc735909e6139c43415a1 1487 Pfam PF01493 GXGXG motif 1236 1418 7.5E-74 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VP0482 a54da18ee51dc735909e6139c43415a1 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 8.8E-177 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VP0482 a54da18ee51dc735909e6139c43415a1 1487 SUPERFAMILY SSF51395 434 1191 5.7E-252 T 22-04-2016 VP0482 a54da18ee51dc735909e6139c43415a1 1487 PANTHER PTHR11938:SF1 2 1477 0.0 T 22-04-2016 VP0482 a54da18ee51dc735909e6139c43415a1 1487 Pfam PF04898 Glutamate synthase central domain 458 738 2.5E-102 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VP0482 a54da18ee51dc735909e6139c43415a1 1487 Gene3D G3DSA:3.20.20.70 440 779 2.3E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0482 a54da18ee51dc735909e6139c43415a1 1487 SUPERFAMILY SSF56235 13 429 2.39E-148 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0482 a54da18ee51dc735909e6139c43415a1 1487 Gene3D G3DSA:3.20.20.70 815 1190 3.7E-166 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0482 a54da18ee51dc735909e6139c43415a1 1487 Gene3D G3DSA:2.160.20.60 1213 1465 3.6E-95 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VP0453 0c045c7748906b02c6f5c3c4e6a23cb0 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 15.785 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VP0453 0c045c7748906b02c6f5c3c4e6a23cb0 105 Pfam PF04999 Cell division protein FtsL 8 103 7.2E-36 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VP0453 0c045c7748906b02c6f5c3c4e6a23cb0 105 PANTHER PTHR37479 1 105 1.8E-34 T 22-04-2016 VP0453 0c045c7748906b02c6f5c3c4e6a23cb0 105 PANTHER PTHR37479:SF1 1 105 1.8E-34 T 22-04-2016 VP0453 0c045c7748906b02c6f5c3c4e6a23cb0 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 102 2.9E-25 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 SUPERFAMILY SSF47413 2 70 1.31E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 Pfam PF01381 Helix-turn-helix 12 64 1.0E-17 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 Gene3D G3DSA:2.60.120.10 73 183 2.1E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 SMART SM00530 9 64 5.0E-18 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 Pfam PF07883 Cupin domain 111 178 1.4E-16 T 22-04-2016 IPR013096 Cupin 2, conserved barrel VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 SUPERFAMILY SSF51182 49 183 3.93E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 Gene3D G3DSA:1.10.260.40 3 72 9.1E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 PANTHER PTHR10245 5 185 4.0E-67 T 22-04-2016 VP1778 dd9d36fbcfcdfd42cb370518034628a4 185 PANTHER PTHR10245:SF42 5 185 4.0E-67 T 22-04-2016 VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 PANTHER PTHR11953 1 238 4.9E-86 T 22-04-2016 VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 PANTHER PTHR11953:SF0 1 238 4.9E-86 T 22-04-2016 VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 2.0E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.1E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 Gene3D G3DSA:3.30.230.70 7 237 5.5E-36 T 22-04-2016 IPR027408 PNPase/RNase PH domain VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 SUPERFAMILY SSF55666 153 236 3.01E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 SUPERFAMILY SSF54211 1 181 4.25E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 47.97 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VP0177 6a3bfe54f6de00da2d3322c79e48fdf4 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 5.7E-111 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VP2603 3405e279bd282bce4909d9169819a893 297 Pfam PF03466 LysR substrate binding domain 88 289 1.0E-20 T 22-04-2016 IPR005119 LysR, substrate-binding VP2603 3405e279bd282bce4909d9169819a893 297 Gene3D G3DSA:3.40.190.10 85 131 8.3E-7 T 22-04-2016 VP2603 3405e279bd282bce4909d9169819a893 297 Gene3D G3DSA:1.10.10.10 3 84 4.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2603 3405e279bd282bce4909d9169819a893 297 SUPERFAMILY SSF46785 2 112 1.16E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2603 3405e279bd282bce4909d9169819a893 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.9E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2603 3405e279bd282bce4909d9169819a893 297 PANTHER PTHR30537 1 291 3.5E-89 T 22-04-2016 VP2603 3405e279bd282bce4909d9169819a893 297 SUPERFAMILY SSF53850 89 291 3.26E-27 T 22-04-2016 VP2603 3405e279bd282bce4909d9169819a893 297 PANTHER PTHR30537:SF19 1 291 3.5E-89 T 22-04-2016 VP2603 3405e279bd282bce4909d9169819a893 297 Gene3D G3DSA:3.40.190.10 157 243 7.1E-11 T 22-04-2016 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 8.0E-126 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 SUPERFAMILY SSF88946 11 122 5.97E-40 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF04542 Sigma-70 region 2 53 122 2.9E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 1.1E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 1.1E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 234 246 1.1E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 PANTHER PTHR30376 2 286 1.8E-123 T 22-04-2016 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF04545 Sigma-70, region 4 230 280 8.0E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.4E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.192 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 Gene3D G3DSA:1.10.10.10 226 280 2.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 SUPERFAMILY SSF88659 199 282 1.57E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 Gene3D G3DSA:1.10.601.10 12 122 4.1E-35 T 22-04-2016 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2953 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 7.1E-9 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP1755 f17631b6952a30fc121706b1992cc71b 1051 SUPERFAMILY SSF52172 768 897 3.7E-37 T 22-04-2016 IPR011006 CheY-like superfamily VP1755 f17631b6952a30fc121706b1992cc71b 1051 SMART SM00448 768 885 7.5E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1755 f17631b6952a30fc121706b1992cc71b 1051 SMART SM00448 930 1047 1.6E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1755 f17631b6952a30fc121706b1992cc71b 1051 Gene3D G3DSA:3.40.50.2300 769 890 4.4E-40 T 22-04-2016 VP1755 f17631b6952a30fc121706b1992cc71b 1051 Pfam PF00512 His Kinase A (phospho-acceptor) domain 394 459 8.5E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1755 f17631b6952a30fc121706b1992cc71b 1051 Gene3D G3DSA:3.30.565.10 469 618 2.6E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1755 f17631b6952a30fc121706b1992cc71b 1051 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 619 5.7E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1755 f17631b6952a30fc121706b1992cc71b 1051 Pfam PF00072 Response regulator receiver domain 770 885 1.8E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1755 f17631b6952a30fc121706b1992cc71b 1051 Pfam PF00072 Response regulator receiver domain 932 1047 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1755 f17631b6952a30fc121706b1992cc71b 1051 Gene3D G3DSA:3.40.50.2300 927 1050 1.8E-40 T 22-04-2016 VP1755 f17631b6952a30fc121706b1992cc71b 1051 PANTHER PTHR24423 912 1051 1.4E-150 T 22-04-2016 VP1755 f17631b6952a30fc121706b1992cc71b 1051 PANTHER PTHR24423 366 625 1.4E-150 T 22-04-2016 VP1755 f17631b6952a30fc121706b1992cc71b 1051 PANTHER PTHR24423 81 109 1.4E-150 T 22-04-2016 VP1755 f17631b6952a30fc121706b1992cc71b 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1755 f17631b6952a30fc121706b1992cc71b 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1755 f17631b6952a30fc121706b1992cc71b 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1755 f17631b6952a30fc121706b1992cc71b 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1755 f17631b6952a30fc121706b1992cc71b 1051 SMART SM00388 394 459 1.6E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1755 f17631b6952a30fc121706b1992cc71b 1051 SUPERFAMILY SSF47384 382 459 3.14E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1755 f17631b6952a30fc121706b1992cc71b 1051 SUPERFAMILY SSF55874 448 618 4.98E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1755 f17631b6952a30fc121706b1992cc71b 1051 SMART SM00387 506 622 4.4E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1755 f17631b6952a30fc121706b1992cc71b 1051 SUPERFAMILY SSF52172 928 1050 1.99E-37 T 22-04-2016 IPR011006 CheY-like superfamily VP1755 f17631b6952a30fc121706b1992cc71b 1051 Gene3D G3DSA:1.10.287.130 390 455 8.2E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2981 75afad01c1a02dbb1382eac6221a48f3 310 PANTHER PTHR30349:SF17 1 308 3.1E-154 T 22-04-2016 VP2981 75afad01c1a02dbb1382eac6221a48f3 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 304 35.266 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VP2981 75afad01c1a02dbb1382eac6221a48f3 310 SUPERFAMILY SSF47823 16 107 4.51E-12 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal VP2981 75afad01c1a02dbb1382eac6221a48f3 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 2.2E-108 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 VP2981 75afad01c1a02dbb1382eac6221a48f3 310 PANTHER PTHR30349 1 308 3.1E-154 T 22-04-2016 VP2981 75afad01c1a02dbb1382eac6221a48f3 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 4.5E-20 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VP2981 75afad01c1a02dbb1382eac6221a48f3 310 SUPERFAMILY SSF56349 116 302 9.42E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP2981 75afad01c1a02dbb1382eac6221a48f3 310 Gene3D G3DSA:1.10.150.130 14 110 1.5E-21 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VP2981 75afad01c1a02dbb1382eac6221a48f3 310 Gene3D G3DSA:1.10.443.10 123 298 3.3E-51 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP2981 75afad01c1a02dbb1382eac6221a48f3 310 Pfam PF00589 Phage integrase family 122 290 1.0E-48 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP1096 5c9565f3b1170ee7394131e063df9274 340 PANTHER PTHR10055:SF6 1 340 4.1E-156 T 22-04-2016 VP1096 5c9565f3b1170ee7394131e063df9274 340 Pfam PF00579 tRNA synthetases class I (W and Y) 10 292 1.3E-53 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1096 5c9565f3b1170ee7394131e063df9274 340 Gene3D G3DSA:3.40.50.620 9 213 9.4E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1096 5c9565f3b1170ee7394131e063df9274 340 PANTHER PTHR10055 1 340 4.1E-156 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP1096 5c9565f3b1170ee7394131e063df9274 340 SUPERFAMILY SSF52374 12 337 5.3E-75 T 22-04-2016 VP1096 5c9565f3b1170ee7394131e063df9274 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 5.0E-69 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP1096 5c9565f3b1170ee7394131e063df9274 340 Gene3D G3DSA:1.10.240.10 214 304 5.0E-34 T 22-04-2016 VP1096 5c9565f3b1170ee7394131e063df9274 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.5E-21 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP1096 5c9565f3b1170ee7394131e063df9274 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.5E-21 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP1096 5c9565f3b1170ee7394131e063df9274 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.5E-21 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP1096 5c9565f3b1170ee7394131e063df9274 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.5E-21 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VP0428 19f6bbf34955ee899034156cf5531894 268 Gene3D G3DSA:3.60.21.10 5 248 1.3E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0428 19f6bbf34955ee899034156cf5531894 268 SUPERFAMILY SSF56300 6 253 7.14E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0428 19f6bbf34955ee899034156cf5531894 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 41.661 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VP0428 19f6bbf34955ee899034156cf5531894 268 PANTHER PTHR12905:SF7 44 268 1.2E-98 T 22-04-2016 VP0428 19f6bbf34955ee899034156cf5531894 268 PANTHER PTHR12905:SF7 4 28 1.2E-98 T 22-04-2016 VP0428 19f6bbf34955ee899034156cf5531894 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 4.0E-27 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VP0428 19f6bbf34955ee899034156cf5531894 268 PANTHER PTHR12905 4 28 1.2E-98 T 22-04-2016 VP0428 19f6bbf34955ee899034156cf5531894 268 PANTHER PTHR12905 44 268 1.2E-98 T 22-04-2016 VP0428 19f6bbf34955ee899034156cf5531894 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 4.9E-16 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VP2248 b411291b7ee311009155f3dd5f9057cb 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 4.8E-98 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 PANTHER PTHR30534 11 351 1.4E-110 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 SUPERFAMILY SSF48029 26 135 2.75E-20 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VP2248 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF14841 FliG middle domain 134 206 4.1E-26 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain VP2248 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 28 93 1.7E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VP2248 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 124 208 2.7E-31 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VP2248 b411291b7ee311009155f3dd5f9057cb 351 PANTHER PTHR30534:SF0 11 351 1.4E-110 T 22-04-2016 VP2248 b411291b7ee311009155f3dd5f9057cb 351 SUPERFAMILY SSF48029 133 344 5.23E-67 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VP2248 b411291b7ee311009155f3dd5f9057cb 351 PIRSF PIRSF003161 18 351 8.6E-115 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 214 349 1.2E-42 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VP2248 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF14842 FliG N-terminal domain 24 124 2.2E-28 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VP2248 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF01706 FliG C-terminal domain 236 343 4.8E-41 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal VP2248 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP2248 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VP0570 63682423614ce8271673d42018fafffa 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 3.7E-31 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 VP0570 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:3.30.450.20 98 196 1.4E-10 T 22-04-2016 VP0570 63682423614ce8271673d42018fafffa 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 7.5E-6 T 22-04-2016 IPR000014 PAS domain VP0570 63682423614ce8271673d42018fafffa 432 SMART SM00388 205 272 1.7E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0570 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:1.10.287.130 197 258 2.0E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0570 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF55785 86 196 1.15E-11 T 22-04-2016 IPR000014 PAS domain VP0570 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF47384 192 271 1.55E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0570 63682423614ce8271673d42018fafffa 432 SMART SM00091 98 166 3.4E-6 T 22-04-2016 IPR000014 PAS domain VP0570 63682423614ce8271673d42018fafffa 432 PANTHER PTHR24423:SF554 1 432 9.6E-216 T 22-04-2016 VP0570 63682423614ce8271673d42018fafffa 432 SMART SM00387 317 429 3.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0570 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0570 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0570 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0570 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0570 63682423614ce8271673d42018fafffa 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 4.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0570 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF55874 261 427 3.27E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0570 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:3.30.565.10 259 426 3.1E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0570 63682423614ce8271673d42018fafffa 432 Pfam PF00989 PAS fold 99 165 6.0E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 VP0570 63682423614ce8271673d42018fafffa 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 1.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0570 63682423614ce8271673d42018fafffa 432 PANTHER PTHR24423 1 432 9.6E-216 T 22-04-2016 VP0570 63682423614ce8271673d42018fafffa 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 2.6E-138 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VP1034 6462c9029d0872a92c3b330fd7842c4f 263 Gene3D G3DSA:3.40.50.150 38 259 5.8E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1034 6462c9029d0872a92c3b330fd7842c4f 263 PANTHER PTHR10108 3 205 5.5E-28 T 22-04-2016 VP1034 6462c9029d0872a92c3b330fd7842c4f 263 SUPERFAMILY SSF53335 7 251 1.55E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1034 6462c9029d0872a92c3b330fd7842c4f 263 PANTHER PTHR10108:SF919 3 205 5.5E-28 T 22-04-2016 VP1034 6462c9029d0872a92c3b330fd7842c4f 263 Pfam PF08241 Methyltransferase domain 52 148 2.8E-13 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VP2864 d18d573f80f5c763eb35195354eeea8f 435 PANTHER PTHR36106 1 435 1.6E-289 T 22-04-2016 VP2864 d18d573f80f5c763eb35195354eeea8f 435 PIRSF PIRSF004539 1 435 5.2E-177 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VP2864 d18d573f80f5c763eb35195354eeea8f 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 8.3E-180 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VP2864 d18d573f80f5c763eb35195354eeea8f 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 1.8E-145 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VP2864 d18d573f80f5c763eb35195354eeea8f 435 PANTHER PTHR36106:SF2 1 435 1.6E-289 T 22-04-2016 VP1317 3809d8dbb8d694f41407167e0360728a 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VP1317 3809d8dbb8d694f41407167e0360728a 76 Pfam PF00462 Glutaredoxin 4 60 5.8E-12 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VP1317 3809d8dbb8d694f41407167e0360728a 76 Gene3D G3DSA:3.40.30.10 3 74 1.5E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1317 3809d8dbb8d694f41407167e0360728a 76 SUPERFAMILY SSF52833 3 68 6.2E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1317 3809d8dbb8d694f41407167e0360728a 76 PANTHER PTHR34386 1 74 2.8E-19 T 22-04-2016 VP1317 3809d8dbb8d694f41407167e0360728a 76 PANTHER PTHR34386:SF1 1 74 2.8E-19 T 22-04-2016 VP2957 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 SUPERFAMILY SSF53335 19 196 3.63E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2957 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 PANTHER PTHR18895:SF60 3 196 6.8E-50 T 22-04-2016 VP2957 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 PANTHER PTHR18895 3 196 6.8E-50 T 22-04-2016 VP2957 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 1.4E-61 T 22-04-2016 VP2957 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 1.9E-60 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP2957 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP2957 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 PIRSF PIRSF004553 18 198 1.7E-55 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP2957 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 Gene3D G3DSA:3.40.50.150 10 197 1.0E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2668 1fa5018afacf5cb0a109c14160d8bbb9 164 Gene3D G3DSA:2.60.450.10 21 156 4.8E-36 T 22-04-2016 VP2668 1fa5018afacf5cb0a109c14160d8bbb9 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.2E-47 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VP2668 1fa5018afacf5cb0a109c14160d8bbb9 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.676 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VP2668 1fa5018afacf5cb0a109c14160d8bbb9 164 Pfam PF03968 OstA-like protein 30 141 6.9E-30 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VP2668 1fa5018afacf5cb0a109c14160d8bbb9 164 PANTHER PTHR36504 1 162 1.3E-42 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:3.40.228.10 191 370 6.7E-63 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 SUPERFAMILY SSF53706 60 646 2.09E-201 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:2.20.25.90 59 115 8.5E-18 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 1.2E-55 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:3.40.50.740 371 394 1.4E-61 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:3.40.50.740 118 189 1.4E-61 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:3.40.50.740 446 616 1.4E-61 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.8E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 PANTHER PTHR11615:SF140 406 599 0.0 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 PANTHER PTHR11615:SF140 10 382 0.0 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 PANTHER PTHR11615:SF140 731 951 0.0 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:2.40.40.20 768 779 6.7E-56 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:2.40.40.20 812 951 6.7E-56 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:2.40.40.20 641 674 6.7E-56 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 3.6E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 PANTHER PTHR11615 406 599 0.0 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 PANTHER PTHR11615 10 382 0.0 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 PANTHER PTHR11615 731 951 0.0 T 22-04-2016 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 SMART SM00926 61 115 3.9E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 SUPERFAMILY SSF50692 752 782 4.35E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VP1513 d7fcd63172170cdb44ade71cbc28f5a9 951 SUPERFAMILY SSF50692 813 951 4.35E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VP2808 d86873025b996ea215ad63c45d8800fd 141 Pfam PF02082 Transcriptional regulator 1 82 3.7E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type VP2808 d86873025b996ea215ad63c45d8800fd 141 PANTHER PTHR33221:SF4 2 138 5.8E-66 T 22-04-2016 VP2808 d86873025b996ea215ad63c45d8800fd 141 Gene3D G3DSA:1.10.10.10 1 133 1.3E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2808 d86873025b996ea215ad63c45d8800fd 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 4.0E-37 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type VP2808 d86873025b996ea215ad63c45d8800fd 141 SUPERFAMILY SSF46785 2 131 4.69E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2808 d86873025b996ea215ad63c45d8800fd 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site VP2808 d86873025b996ea215ad63c45d8800fd 141 PANTHER PTHR33221 2 138 5.8E-66 T 22-04-2016 VP2808 d86873025b996ea215ad63c45d8800fd 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.924 T 22-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.0E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 PANTHER PTHR11921 3 229 1.6E-102 T 22-04-2016 VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 Gene3D G3DSA:1.10.1060.10 107 230 1.0E-35 T 22-04-2016 VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.1E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 SUPERFAMILY SSF46548 107 226 6.1E-31 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 SUPERFAMILY SSF54292 5 106 1.04E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.0E-95 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VP2841 b661bce73a5130d9e6b24dbb0c6b45a9 246 Gene3D G3DSA:3.10.20.30 3 106 5.3E-35 T 22-04-2016 IPR012675 Beta-grasp domain VP1184 b983731c47f277beaf533af29f9a6425 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 3.8E-12 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP1184 b983731c47f277beaf533af29f9a6425 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 335 3.8E-12 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP1184 b983731c47f277beaf533af29f9a6425 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 3.8E-12 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP1184 b983731c47f277beaf533af29f9a6425 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 3.8E-12 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP1184 b983731c47f277beaf533af29f9a6425 476 Pfam PF00209 Sodium:neurotransmitter symporter family 150 447 5.8E-33 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP1184 b983731c47f277beaf533af29f9a6425 476 Pfam PF00209 Sodium:neurotransmitter symporter family 10 120 1.6E-21 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP1184 b983731c47f277beaf533af29f9a6425 476 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP1184 b983731c47f277beaf533af29f9a6425 476 PANTHER PTHR11616 10 442 1.4E-149 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP1184 b983731c47f277beaf533af29f9a6425 476 SUPERFAMILY SSF161070 10 457 3.01E-129 T 22-04-2016 VP1184 b983731c47f277beaf533af29f9a6425 476 PANTHER PTHR11616:SF167 10 442 1.4E-149 T 22-04-2016 VP1999 4c4617b2cf92d32f86fb0d62ebb6e373 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 5.4E-36 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VP1999 4c4617b2cf92d32f86fb0d62ebb6e373 377 SUPERFAMILY SSF111369 49 253 1.31E-15 T 22-04-2016 VP1999 4c4617b2cf92d32f86fb0d62ebb6e373 377 PANTHER PTHR32347 1 367 8.4E-61 T 22-04-2016 VP1999 4c4617b2cf92d32f86fb0d62ebb6e373 377 PANTHER PTHR32347:SF12 1 367 8.4E-61 T 22-04-2016 VP1999 4c4617b2cf92d32f86fb0d62ebb6e373 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.3E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VP1999 4c4617b2cf92d32f86fb0d62ebb6e373 377 Gene3D G3DSA:2.40.50.100 57 90 5.2E-13 T 22-04-2016 VP1999 4c4617b2cf92d32f86fb0d62ebb6e373 377 Gene3D G3DSA:2.40.50.100 174 200 5.2E-13 T 22-04-2016 VP0761 ff409134de5dc997bc217cf69b30850f 197 PANTHER PTHR38108 1 151 1.8E-19 T 22-04-2016 VP0761 ff409134de5dc997bc217cf69b30850f 197 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 191 4.0E-33 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VP0761 ff409134de5dc997bc217cf69b30850f 197 PANTHER PTHR38108:SF1 1 151 1.8E-19 T 22-04-2016 VP0761 ff409134de5dc997bc217cf69b30850f 197 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 194 25.107 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VP0872 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 19.086 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VP0872 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 5.2E-34 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VP0872 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Gene3D G3DSA:3.30.1070.10 33 86 2.5E-22 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VP0872 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 PANTHER PTHR33404 1 85 7.0E-30 T 22-04-2016 VP0872 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 SUPERFAMILY SSF55229 33 85 3.92E-17 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VP0872 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 9.2E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VP1328 e4413c912583b2a5b8869524feb816be 224 SUPERFAMILY SSF46785 9 76 1.76E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1328 e4413c912583b2a5b8869524feb816be 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.4E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1328 e4413c912583b2a5b8869524feb816be 224 Gene3D G3DSA:1.10.10.10 8 73 8.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1328 e4413c912583b2a5b8869524feb816be 224 Gene3D G3DSA:1.20.120.530 75 219 1.6E-37 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP1328 e4413c912583b2a5b8869524feb816be 224 PANTHER PTHR11751 7 98 1.5E-28 T 22-04-2016 VP1328 e4413c912583b2a5b8869524feb816be 224 PANTHER PTHR11751:SF436 7 98 1.5E-28 T 22-04-2016 VP1328 e4413c912583b2a5b8869524feb816be 224 Pfam PF07729 FCD domain 82 206 1.6E-25 T 22-04-2016 IPR011711 GntR, C-terminal VP1328 e4413c912583b2a5b8869524feb816be 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1328 e4413c912583b2a5b8869524feb816be 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1328 e4413c912583b2a5b8869524feb816be 224 SMART SM00895 82 207 2.9E-20 T 22-04-2016 IPR011711 GntR, C-terminal VP1328 e4413c912583b2a5b8869524feb816be 224 SMART SM00345 14 72 1.5E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1328 e4413c912583b2a5b8869524feb816be 224 SUPERFAMILY SSF48008 78 214 3.66E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP3072 1b81adc832c18e96652fea14c4502b38 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 7.5E-54 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.959 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 PANTHER PTHR11910 7 176 6.5E-55 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 8.7E-64 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 VP3072 1b81adc832c18e96652fea14c4502b38 177 SUPERFAMILY SSF47928 3 105 2.75E-28 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VP3072 1b81adc832c18e96652fea14c4502b38 177 Gene3D G3DSA:1.10.520.20 3 106 7.6E-36 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VP0719 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VP0719 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VP0719 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VP0719 c088a159ca4f11898203174f3d2aede1 392 Gene3D G3DSA:3.40.710.10 30 282 2.6E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP0719 c088a159ca4f11898203174f3d2aede1 392 SUPERFAMILY SSF56601 11 283 4.01E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP0719 c088a159ca4f11898203174f3d2aede1 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 5.0E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0719 c088a159ca4f11898203174f3d2aede1 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 1.7E-94 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VP0719 c088a159ca4f11898203174f3d2aede1 392 SUPERFAMILY SSF69189 283 375 3.34E-28 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0719 c088a159ca4f11898203174f3d2aede1 392 PANTHER PTHR21581 32 392 3.3E-157 T 22-04-2016 VP0719 c088a159ca4f11898203174f3d2aede1 392 SMART SM00936 283 373 1.4E-38 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0719 c088a159ca4f11898203174f3d2aede1 392 PANTHER PTHR21581:SF4 32 392 3.3E-157 T 22-04-2016 VP0719 c088a159ca4f11898203174f3d2aede1 392 Gene3D G3DSA:2.60.410.10 283 373 3.1E-33 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 PANTHER PTHR11079:SF84 4 313 3.7E-153 T 22-04-2016 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 8.6E-93 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 PANTHER PTHR11079 4 313 3.7E-153 T 22-04-2016 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 Pfam PF00849 RNA pseudouridylate synthase 102 247 5.4E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 Gene3D G3DSA:3.10.290.10 20 68 9.6E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 Pfam PF01479 S4 domain 20 66 2.8E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 SUPERFAMILY SSF55174 19 71 3.79E-9 T 22-04-2016 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 SUPERFAMILY SSF55120 91 307 1.01E-63 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2061 9270af88d9aba8c6fa0acf0f154debf0 315 SMART SM00363 20 77 1.6E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP1266 6492284aa04e2ed2987996518a5c1612 324 Gene3D G3DSA:1.10.287.110 267 323 5.3E-14 T 22-04-2016 IPR001623 DnaJ domain VP1266 6492284aa04e2ed2987996518a5c1612 324 Gene3D G3DSA:1.25.40.10 29 126 3.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1266 6492284aa04e2ed2987996518a5c1612 324 Gene3D G3DSA:1.20.1000.10 127 260 4.9E-4 T 22-04-2016 VP1266 6492284aa04e2ed2987996518a5c1612 324 SUPERFAMILY SSF81901 51 144 4.19E-8 T 22-04-2016 VP1266 6492284aa04e2ed2987996518a5c1612 324 SUPERFAMILY SSF46565 269 321 5.76E-13 T 22-04-2016 IPR001623 DnaJ domain VP2447 7a0cd99eca17720df5b8e77a29539613 337 PANTHER PTHR30217:SF3 246 336 7.7E-214 T 22-04-2016 VP2447 7a0cd99eca17720df5b8e77a29539613 337 PANTHER PTHR30217:SF3 1 220 7.7E-214 T 22-04-2016 VP2447 7a0cd99eca17720df5b8e77a29539613 337 PANTHER PTHR30217 246 336 7.7E-214 T 22-04-2016 VP2447 7a0cd99eca17720df5b8e77a29539613 337 PANTHER PTHR30217 1 220 7.7E-214 T 22-04-2016 VP2447 7a0cd99eca17720df5b8e77a29539613 337 Pfam PF01136 Peptidase family U32 75 336 2.2E-70 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP2447 7a0cd99eca17720df5b8e77a29539613 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP1905 bec6ae38416e1c911f8c03b4b03d24b4 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.4E-172 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VP1905 bec6ae38416e1c911f8c03b4b03d24b4 523 PANTHER PTHR30047 1 523 5.4E-224 T 22-04-2016 VP1905 bec6ae38416e1c911f8c03b4b03d24b4 523 PANTHER PTHR30047:SF2 1 523 5.4E-224 T 22-04-2016 VP1905 bec6ae38416e1c911f8c03b4b03d24b4 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 VP1905 bec6ae38416e1c911f8c03b4b03d24b4 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 521 4.8E-136 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VP0691 2ab482946b953fb39a86a58709334b46 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.5E-73 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 VP0691 2ab482946b953fb39a86a58709334b46 482 SUPERFAMILY SSF52402 174 372 1.17E-42 T 22-04-2016 VP0691 2ab482946b953fb39a86a58709334b46 482 PANTHER PTHR14911:SF15 3 417 2.8E-258 T 22-04-2016 VP0691 2ab482946b953fb39a86a58709334b46 482 Gene3D G3DSA:3.40.50.620 173 333 1.1E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0691 2ab482946b953fb39a86a58709334b46 482 SUPERFAMILY SSF143437 1 173 1.62E-47 T 22-04-2016 VP0691 2ab482946b953fb39a86a58709334b46 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 225.017 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VP0691 2ab482946b953fb39a86a58709334b46 482 Pfam PF02926 THUMP domain 45 158 2.3E-24 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VP0691 2ab482946b953fb39a86a58709334b46 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.9E-42 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 VP0691 2ab482946b953fb39a86a58709334b46 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.3E-113 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VP0691 2ab482946b953fb39a86a58709334b46 482 SMART SM00981 75 165 8.2E-26 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VP0691 2ab482946b953fb39a86a58709334b46 482 PANTHER PTHR14911 3 417 2.8E-258 T 22-04-2016 VP0691 2ab482946b953fb39a86a58709334b46 482 Gene3D G3DSA:3.40.250.10 405 480 9.8E-11 T 22-04-2016 IPR001763 Rhodanese-like domain VP0691 2ab482946b953fb39a86a58709334b46 482 SUPERFAMILY SSF52821 402 481 1.83E-12 T 22-04-2016 IPR001763 Rhodanese-like domain VP0682 dbc986f5d8ed8f1ce7f85f0b82388405 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.5E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0682 dbc986f5d8ed8f1ce7f85f0b82388405 156 Gene3D G3DSA:3.40.50.960 3 154 1.6E-65 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0682 dbc986f5d8ed8f1ce7f85f0b82388405 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.315 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0682 dbc986f5d8ed8f1ce7f85f0b82388405 156 SUPERFAMILY SSF52121 4 154 4.58E-61 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0682 dbc986f5d8ed8f1ce7f85f0b82388405 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.4E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0682 dbc986f5d8ed8f1ce7f85f0b82388405 156 PANTHER PTHR21058 1 155 1.5E-78 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0199 fef1863ece0cb1587ecac2a635cf4b11 397 Gene3D G3DSA:3.40.50.2000 212 373 5.9E-16 T 22-04-2016 VP0199 fef1863ece0cb1587ecac2a635cf4b11 397 Gene3D G3DSA:3.40.50.2000 3 211 3.2E-47 T 22-04-2016 VP0199 fef1863ece0cb1587ecac2a635cf4b11 397 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 6 372 1.1E-144 T 22-04-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VP0199 fef1863ece0cb1587ecac2a635cf4b11 397 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 1.3E-92 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VP0199 fef1863ece0cb1587ecac2a635cf4b11 397 SUPERFAMILY SSF53756 6 375 3.98E-95 T 22-04-2016 VP2773 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2773 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 4.0E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2773 699591b434c362d7ce9072621666aaeb 124 PANTHER PTHR11652 1 116 2.7E-77 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2773 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2773 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VP2773 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VP2773 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 2.5E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2773 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 123 1.2E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2773 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VP2773 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VP2773 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VP2773 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VP2773 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VP2773 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VP2537 7c6645039b3296d01318fb54c0d29e45 172 PANTHER PTHR35799 2 169 8.4E-105 T 22-04-2016 VP2537 7c6645039b3296d01318fb54c0d29e45 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 6.3E-62 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 1.0E-80 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 PIRSF PIRSF006160 1 162 1.5E-67 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 SUPERFAMILY SSF63411 4 162 4.49E-67 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2537 7c6645039b3296d01318fb54c0d29e45 172 Gene3D G3DSA:3.30.1360.80 1 171 1.3E-76 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2537 7c6645039b3296d01318fb54c0d29e45 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.796 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 SUPERFAMILY SSF53706 69 111 3.02E-116 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 SUPERFAMILY SSF53706 138 882 3.02E-116 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615:SF136 126 391 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615:SF136 71 106 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615:SF136 558 765 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615:SF136 802 1029 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615:SF136 410 494 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 904 997 9.3E-11 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Gene3D G3DSA:2.20.25.90 71 158 7.4E-12 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Gene3D G3DSA:3.40.50.740 619 688 6.7E-28 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Gene3D G3DSA:3.40.50.740 159 261 6.7E-28 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Gene3D G3DSA:3.40.50.740 720 739 6.7E-28 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 SUPERFAMILY SSF50692 881 1003 7.91E-22 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615 126 391 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615 71 106 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615 558 765 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615 802 1029 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 PANTHER PTHR11615 410 494 5.9E-140 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 695 7.8E-23 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Gene3D G3DSA:3.40.228.10 469 569 4.5E-41 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Gene3D G3DSA:3.40.228.10 262 379 4.5E-41 T 22-04-2016 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 SMART SM00926 72 154 1.8E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VP2014 8b2f652a6a68c56a97bae0db470bf86e 1030 Gene3D G3DSA:2.40.40.20 864 1030 2.8E-25 T 22-04-2016 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 PANTHER PTHR30389 1 504 0.0 T 22-04-2016 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 SUPERFAMILY SSF117457 317 489 4.84E-64 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.8E-63 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 Gene3D G3DSA:3.20.130.10 303 490 2.6E-75 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05683 Fumarase C-terminus 289 490 3.9E-84 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.8E-51 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 2.9E-98 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 PIRSF PIRSF001394 1 505 1.0E-217 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VP1873 5467c0337b26c44c4c60e1d1b834efd1 505 PANTHER PTHR30389:SF1 1 504 0.0 T 22-04-2016 VP3054 e1d0c67260555257e3f8ccdc573b1186 200 Gene3D G3DSA:3.40.30.10 2 117 2.4E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold VP3054 e1d0c67260555257e3f8ccdc573b1186 200 Gene3D G3DSA:3.40.30.10 119 199 3.3E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold VP3054 e1d0c67260555257e3f8ccdc573b1186 200 PIRSF PIRSF001488 1 200 1.3E-70 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VP3054 e1d0c67260555257e3f8ccdc573b1186 200 PANTHER PTHR35891 1 200 1.8E-84 T 22-04-2016 VP3054 e1d0c67260555257e3f8ccdc573b1186 200 PANTHER PTHR35891:SF2 1 200 1.8E-84 T 22-04-2016 VP3054 e1d0c67260555257e3f8ccdc573b1186 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 2.9E-29 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 VP3054 e1d0c67260555257e3f8ccdc573b1186 200 SUPERFAMILY SSF52833 20 197 1.6E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold VP3054 e1d0c67260555257e3f8ccdc573b1186 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VP2169 ba26c185d65f5677b66684cb5ef1eb62 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.286 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VP2169 ba26c185d65f5677b66684cb5ef1eb62 146 PIRSF PIRSF006173 1 144 7.7E-66 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VP2169 ba26c185d65f5677b66684cb5ef1eb62 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-8 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VP2169 ba26c185d65f5677b66684cb5ef1eb62 146 PANTHER PTHR37421:SF1 1 146 1.1E-71 T 22-04-2016 VP2169 ba26c185d65f5677b66684cb5ef1eb62 146 PANTHER PTHR37421 1 146 1.1E-71 T 22-04-2016 VP0560 c0ab9467da85448c4eaa5e932eea12a8 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 9.2E-70 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VP0560 c0ab9467da85448c4eaa5e932eea12a8 242 PANTHER PTHR30616 1 242 7.0E-125 T 22-04-2016 VP0560 c0ab9467da85448c4eaa5e932eea12a8 242 SUPERFAMILY SSF64438 4 241 6.41E-83 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic VP0560 c0ab9467da85448c4eaa5e932eea12a8 242 Gene3D G3DSA:3.60.140.10 3 241 1.4E-90 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VP0560 c0ab9467da85448c4eaa5e932eea12a8 242 PANTHER PTHR30616:SF3 1 242 7.0E-125 T 22-04-2016 VP0560 c0ab9467da85448c4eaa5e932eea12a8 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 26 241 7.8E-60 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VP2600 386471d494c7dd86b74663bba0bb7ced 386 SUPERFAMILY SSF53748 3 382 4.48E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 Pfam PF00162 Phosphoglycerate kinase 6 373 1.1E-136 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PIRSF PIRSF000724 1 386 4.4E-134 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.313 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 Gene3D G3DSA:3.40.50.1260 5 174 9.5E-65 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 PANTHER PTHR11406 1 386 4.3E-195 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP2600 386471d494c7dd86b74663bba0bb7ced 386 Gene3D G3DSA:3.40.50.1270 175 371 4.3E-79 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 Gene3D G3DSA:3.40.640.10 88 338 2.9E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 Pfam PF00202 Aminotransferase class-III 51 464 2.1E-94 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 Gene3D G3DSA:3.40.640.10 571 844 2.2E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 466 2.4E-160 T 22-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 Gene3D G3DSA:3.90.1150.10 339 463 1.1E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 532 892 1.5E-61 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 Gene3D G3DSA:1.20.1650.10 464 560 1.3E-39 T 22-04-2016 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 PANTHER PTHR11999:SF106 456 954 3.4E-174 T 22-04-2016 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 SUPERFAMILY SSF53383 503 951 5.57E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1942 6849c0659ba1f49d5e6de4008da360a3 958 SUPERFAMILY SSF53383 42 464 1.22E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1942 6849c0659ba1f49d5e6de4008da360a3 958 PANTHER PTHR11999 456 954 3.4E-174 T 22-04-2016 VP1942 6849c0659ba1f49d5e6de4008da360a3 958 Gene3D G3DSA:3.90.1150.10 845 957 3.9E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 Gene3D G3DSA:3.50.50.60 1 167 4.0E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 Gene3D G3DSA:3.50.50.60 279 316 4.0E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 PANTHER PTHR13789:SF5 2 399 6.0E-166 T 22-04-2016 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 4.2E-138 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 SUPERFAMILY SSF51905 268 385 1.43E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 SUPERFAMILY SSF51905 5 177 1.43E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 22-04-2016 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 22-04-2016 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 22-04-2016 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 22-04-2016 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 Pfam PF01494 FAD binding domain 5 347 1.5E-27 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 PANTHER PTHR13789 2 399 6.0E-166 T 22-04-2016 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 Gene3D G3DSA:3.30.9.10 168 274 1.7E-4 T 22-04-2016 VP2586 d4c3a3761e85dfe96fe8453045af6da2 402 Gene3D G3DSA:3.30.9.10 332 359 1.7E-4 T 22-04-2016 VP2158 12bfe66bfb68ff2ac92aaafae8f46ff6 294 PANTHER PTHR11122:SF14 5 291 7.6E-97 T 22-04-2016 VP2158 12bfe66bfb68ff2ac92aaafae8f46ff6 294 SUPERFAMILY SSF74650 9 288 8.16E-75 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VP2158 12bfe66bfb68ff2ac92aaafae8f46ff6 294 Pfam PF01263 Aldose 1-epimerase 27 291 1.7E-51 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VP2158 12bfe66bfb68ff2ac92aaafae8f46ff6 294 Gene3D G3DSA:2.70.98.10 14 291 3.8E-87 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VP2158 12bfe66bfb68ff2ac92aaafae8f46ff6 294 PANTHER PTHR11122 5 291 7.6E-97 T 22-04-2016 VP2158 12bfe66bfb68ff2ac92aaafae8f46ff6 294 PIRSF PIRSF016020 3 294 5.7E-66 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 PANTHER PTHR30146 1 331 3.8E-176 T 22-04-2016 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 SMART SM00354 1 71 3.6E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 Gene3D G3DSA:1.10.260.40 2 57 1.6E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 SUPERFAMILY SSF53822 61 330 2.94E-83 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP2393 5108473163ceb6cda9f89cc2be8d7653 332 Gene3D G3DSA:3.40.50.2300 58 166 2.6E-49 T 22-04-2016 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.1E-37 T 22-04-2016 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 PANTHER PTHR30146:SF55 1 331 3.8E-176 T 22-04-2016 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 SUPERFAMILY SSF47413 1 60 3.19E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 Gene3D G3DSA:3.40.50.2300 167 330 1.4E-53 T 22-04-2016 VP2393 5108473163ceb6cda9f89cc2be8d7653 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP1085 d5210af188ce74140b6f698a86d3355d 392 SUPERFAMILY SSF51735 169 293 2.52E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1085 d5210af188ce74140b6f698a86d3355d 392 Pfam PF00899 ThiF family 172 305 6.1E-7 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VP1085 d5210af188ce74140b6f698a86d3355d 392 Gene3D G3DSA:3.40.50.720 173 296 3.6E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0122 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 7.5E-57 T 22-04-2016 VP0122 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF52540 5 211 2.18E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0122 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.30.70.240 404 482 1.1E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP0122 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.30.70.870 308 403 2.5E-39 T 22-04-2016 VP0122 3e664a0161868c0a7822abae6464e0ae 609 PANTHER PTHR23115 1 597 2.4E-298 T 22-04-2016 VP0122 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.40.50.300 7 209 2.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0122 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP0122 3e664a0161868c0a7822abae6464e0ae 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VP0122 3e664a0161868c0a7822abae6464e0ae 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 3.0E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP0122 3e664a0161868c0a7822abae6464e0ae 609 PANTHER PTHR23115:SF14 1 597 2.4E-298 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VP0122 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0122 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0122 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0122 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0122 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP0122 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:2.40.50.250 487 581 1.3E-39 T 22-04-2016 VP0122 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF54980 402 516 2.83E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP0122 3e664a0161868c0a7822abae6464e0ae 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 5.2E-294 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VP0122 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.6E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP0122 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF50447 155 303 4.16E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP0122 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:2.40.30.10 210 307 1.1E-26 T 22-04-2016 VP0122 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 3.3E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VP0239 f94bc9c3b6270129dac0cc8860bf5d02 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.715 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VP0239 f94bc9c3b6270129dac0cc8860bf5d02 256 SUPERFAMILY SSF51351 2 250 6.68E-89 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VP0239 f94bc9c3b6270129dac0cc8860bf5d02 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VP0239 f94bc9c3b6270129dac0cc8860bf5d02 256 Pfam PF00121 Triosephosphate isomerase 5 247 2.6E-87 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VP0239 f94bc9c3b6270129dac0cc8860bf5d02 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 4.5E-78 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VP0239 f94bc9c3b6270129dac0cc8860bf5d02 256 Gene3D G3DSA:3.20.20.70 1 252 8.8E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0239 f94bc9c3b6270129dac0cc8860bf5d02 256 PANTHER PTHR21139 1 256 5.6E-123 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VP2154 ba837d7b67efaec9d7272cd61252410a 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 5.6E-29 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 VP0536 c54bf20c05f1777dc8faf9a122695686 143 PANTHER PTHR10516:SF329 132 143 1.4E-17 T 22-04-2016 VP0536 c54bf20c05f1777dc8faf9a122695686 143 SUPERFAMILY SSF54534 4 142 7.27E-37 T 22-04-2016 VP0536 c54bf20c05f1777dc8faf9a122695686 143 PANTHER PTHR10516 4 76 1.4E-17 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VP0536 c54bf20c05f1777dc8faf9a122695686 143 PANTHER PTHR10516:SF329 4 76 1.4E-17 T 22-04-2016 VP0536 c54bf20c05f1777dc8faf9a122695686 143 PANTHER PTHR10516 132 143 1.4E-17 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VP0536 c54bf20c05f1777dc8faf9a122695686 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 2.5E-13 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VP0536 c54bf20c05f1777dc8faf9a122695686 143 Gene3D G3DSA:3.10.50.40 129 143 2.4E-18 T 22-04-2016 VP0536 c54bf20c05f1777dc8faf9a122695686 143 Gene3D G3DSA:3.10.50.40 3 79 2.4E-18 T 22-04-2016 VP0851 2b44f15fe054601eb69ef281a111be30 261 Gene3D G3DSA:1.10.3470.10 44 238 1.1E-8 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VP0851 2b44f15fe054601eb69ef281a111be30 261 PANTHER PTHR30477:SF0 3 259 7.4E-80 T 22-04-2016 VP0851 2b44f15fe054601eb69ef281a111be30 261 Pfam PF00950 ABC 3 transport family 1 256 3.3E-74 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 VP0851 2b44f15fe054601eb69ef281a111be30 261 PANTHER PTHR30477 3 259 7.4E-80 T 22-04-2016 VP0851 2b44f15fe054601eb69ef281a111be30 261 SUPERFAMILY SSF81345 2 253 5.36E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VP2655 d2f350896b8f202cebf575c8aab58b32 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VP2655 d2f350896b8f202cebf575c8aab58b32 153 Gene3D G3DSA:2.30.30.20 101 152 1.2E-23 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VP2655 d2f350896b8f202cebf575c8aab58b32 153 Gene3D G3DSA:3.30.70.140 2 98 1.5E-36 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VP2655 d2f350896b8f202cebf575c8aab58b32 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.949 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VP2655 d2f350896b8f202cebf575c8aab58b32 153 PANTHER PTHR35805:SF1 2 153 1.5E-73 T 22-04-2016 VP2655 d2f350896b8f202cebf575c8aab58b32 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.5E-61 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VP2655 d2f350896b8f202cebf575c8aab58b32 153 SUPERFAMILY SSF54893 2 100 7.72E-36 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VP2655 d2f350896b8f202cebf575c8aab58b32 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 2.3E-19 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VP2655 d2f350896b8f202cebf575c8aab58b32 153 SUPERFAMILY SSF57825 101 151 4.71E-16 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VP2655 d2f350896b8f202cebf575c8aab58b32 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.3E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VP2655 d2f350896b8f202cebf575c8aab58b32 153 PANTHER PTHR35805 2 153 1.5E-73 T 22-04-2016 VP1227 71a7da4ae32a2b4ccb4010acc7d1391c 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 2.2E-44 T 22-04-2016 IPR010791 AttH domain VP1227 71a7da4ae32a2b4ccb4010acc7d1391c 374 Gene3D G3DSA:2.40.370.10 67 249 9.7E-59 T 22-04-2016 IPR023374 AttH-like domain VP1227 71a7da4ae32a2b4ccb4010acc7d1391c 374 PANTHER PTHR38591 2 374 1.6E-88 T 22-04-2016 VP1227 71a7da4ae32a2b4ccb4010acc7d1391c 374 Pfam PF17186 Lipocalin-like domain 253 374 1.5E-33 T 22-04-2016 IPR033451 AttH, lipocalin-like domain VP1227 71a7da4ae32a2b4ccb4010acc7d1391c 374 Gene3D G3DSA:2.40.370.10 253 374 2.9E-35 T 22-04-2016 IPR023374 AttH-like domain VP1227 71a7da4ae32a2b4ccb4010acc7d1391c 374 SUPERFAMILY SSF159245 56 374 5.1E-91 T 22-04-2016 VP1175 bf82ebe880dc48eb9bfd26264f97cf75 139 Pfam PF04024 PspC domain 14 72 1.1E-15 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal VP1175 bf82ebe880dc48eb9bfd26264f97cf75 139 PANTHER PTHR33885 5 136 4.1E-26 T 22-04-2016 VP1175 bf82ebe880dc48eb9bfd26264f97cf75 139 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 13 139 1.2E-47 T 22-04-2016 IPR014320 Phage shock protein, PspC VP2516 30ce1ce80f69be7ca60c44adf95fe6ed 204 SUPERFAMILY SSF46689 8 84 8.48E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2516 30ce1ce80f69be7ca60c44adf95fe6ed 204 Gene3D G3DSA:1.10.357.10 16 198 3.5E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VP2516 30ce1ce80f69be7ca60c44adf95fe6ed 204 SUPERFAMILY SSF48498 89 197 1.11E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VP2516 30ce1ce80f69be7ca60c44adf95fe6ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP2516 30ce1ce80f69be7ca60c44adf95fe6ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP2516 30ce1ce80f69be7ca60c44adf95fe6ed 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP2516 30ce1ce80f69be7ca60c44adf95fe6ed 204 PANTHER PTHR30055 3 197 1.7E-23 T 22-04-2016 VP0318 736ff8f5e4b8d2a151f1276e62776325 234 SMART SM00382 24 209 7.6E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0318 736ff8f5e4b8d2a151f1276e62776325 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0318 736ff8f5e4b8d2a151f1276e62776325 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 2.2E-103 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 VP0318 736ff8f5e4b8d2a151f1276e62776325 234 PANTHER PTHR24220 1 233 3.3E-98 T 22-04-2016 VP0318 736ff8f5e4b8d2a151f1276e62776325 234 SUPERFAMILY SSF52540 1 230 1.04E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0318 736ff8f5e4b8d2a151f1276e62776325 234 PANTHER PTHR24220:SF439 1 233 3.3E-98 T 22-04-2016 VP0318 736ff8f5e4b8d2a151f1276e62776325 234 Pfam PF00005 ABC transporter 18 157 4.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0318 736ff8f5e4b8d2a151f1276e62776325 234 Gene3D G3DSA:3.40.50.300 1 229 8.5E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 SUPERFAMILY SSF52172 1026 1142 6.69E-20 T 22-04-2016 IPR011006 CheY-like superfamily VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 Gene3D G3DSA:3.40.50.2300 1025 1142 3.0E-18 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 Gene3D G3DSA:1.10.287.130 786 849 1.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 SUPERFAMILY SSF55785 626 741 1.74E-8 T 22-04-2016 IPR000014 PAS domain VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PANTHER PTHR24423:SF439 626 760 4.5E-229 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PANTHER PTHR24423:SF439 179 198 4.5E-229 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PANTHER PTHR24423:SF439 9 60 4.5E-229 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PANTHER PTHR24423:SF439 786 1141 4.5E-229 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 Gene3D G3DSA:3.30.565.10 854 1006 5.4E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 2.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 SMART SM00448 1026 1139 3.7E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 SUPERFAMILY SSF55874 843 1002 7.6E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 SMART SM00388 788 853 8.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 Gene3D G3DSA:3.30.450.20 626 741 5.6E-14 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 4.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 SMART SM00387 897 1006 5.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 SUPERFAMILY SSF47384 774 854 2.75E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1005 3.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PANTHER PTHR24423 626 760 4.5E-229 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PANTHER PTHR24423 179 198 4.5E-229 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PANTHER PTHR24423 9 60 4.5E-229 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 PANTHER PTHR24423 786 1141 4.5E-229 T 22-04-2016 VP2874 618e13b97a9bf08f2af3918f84c9b672 1143 Pfam PF12860 PAS fold 634 748 8.0E-44 T 22-04-2016 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 9.2E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.5E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 SUPERFAMILY SSF55604 9 81 3.66E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 PANTHER PTHR30175 1 462 9.7E-258 T 22-04-2016 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 2.8E-34 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 1.2E-206 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 Gene3D G3DSA:3.30.1360.60 7 83 3.8E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP0710 d07a14a2bec8e4ce2c9f8c9dba618e90 474 PANTHER PTHR30175:SF4 1 462 9.7E-258 T 22-04-2016 VP0405 03c020d0e47b2630285d6c1663690385 586 Gene3D G3DSA:3.90.580.10 2 101 1.9E-42 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VP0405 03c020d0e47b2630285d6c1663690385 586 Gene3D G3DSA:3.40.1360.10 248 374 6.4E-46 T 22-04-2016 VP0405 03c020d0e47b2630285d6c1663690385 586 Pfam PF13155 Toprim-like 270 356 6.5E-14 T 22-04-2016 VP0405 03c020d0e47b2630285d6c1663690385 586 SMART SM00400 36 90 2.1E-36 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VP0405 03c020d0e47b2630285d6c1663690385 586 Pfam PF10410 DnaB-helicase binding domain of primase 377 431 8.4E-8 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VP0405 03c020d0e47b2630285d6c1663690385 586 Gene3D G3DSA:3.90.980.10 122 247 6.0E-47 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal VP0405 03c020d0e47b2630285d6c1663690385 586 Gene3D G3DSA:1.20.50.20 375 432 7.7E-14 T 22-04-2016 VP0405 03c020d0e47b2630285d6c1663690385 586 Pfam PF08278 DNA primase DnaG DnaB-binding 457 580 5.8E-37 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VP0405 03c020d0e47b2630285d6c1663690385 586 SUPERFAMILY SSF56731 122 431 3.79E-110 T 22-04-2016 VP0405 03c020d0e47b2630285d6c1663690385 586 Hamap MF_00974 DNA primase [dnaG]. 4 582 29.122 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VP0405 03c020d0e47b2630285d6c1663690385 586 SMART SM00766 456 581 2.8E-58 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VP0405 03c020d0e47b2630285d6c1663690385 586 PANTHER PTHR30313 3 582 8.5E-159 T 22-04-2016 VP0405 03c020d0e47b2630285d6c1663690385 586 SUPERFAMILY SSF57783 4 101 4.76E-38 T 22-04-2016 VP0405 03c020d0e47b2630285d6c1663690385 586 SMART SM00493 266 337 1.4E-17 T 22-04-2016 IPR006171 Toprim domain VP0405 03c020d0e47b2630285d6c1663690385 586 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 8.2E-42 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal VP0405 03c020d0e47b2630285d6c1663690385 586 TIGRFAM TIGR01391 dnaG: DNA primase 5 425 6.8E-147 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VP0405 03c020d0e47b2630285d6c1663690385 586 PIRSF PIRSF002811 2 585 1.3E-143 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VP0405 03c020d0e47b2630285d6c1663690385 586 SUPERFAMILY SSF117023 453 584 6.41E-45 T 22-04-2016 VP0405 03c020d0e47b2630285d6c1663690385 586 Gene3D G3DSA:1.10.860.10 443 585 8.3E-55 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VP0405 03c020d0e47b2630285d6c1663690385 586 Pfam PF01807 CHC2 zinc finger 6 101 2.4E-41 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VP1064 aaa27ed0a471b438c5d310d1cd731c88 347 Gene3D G3DSA:1.10.287.70 24 97 4.7E-14 T 22-04-2016 VP1064 aaa27ed0a471b438c5d310d1cd731c88 347 SUPERFAMILY SSF51735 121 240 4.92E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1064 aaa27ed0a471b438c5d310d1cd731c88 347 Pfam PF07885 Ion channel 26 100 1.5E-14 T 22-04-2016 IPR013099 Potassium channel domain VP1064 aaa27ed0a471b438c5d310d1cd731c88 347 Gene3D G3DSA:3.40.50.720 113 233 2.8E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1064 aaa27ed0a471b438c5d310d1cd731c88 347 SUPERFAMILY SSF81324 9 138 6.67E-18 T 22-04-2016 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 SUPERFAMILY SSF51569 4 356 5.68E-132 T 22-04-2016 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 Gene3D G3DSA:3.20.20.70 11 354 7.9E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 1.5E-180 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.5E-90 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 PIRSF PIRSF001359 13 358 5.9E-94 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 PANTHER PTHR30559:SF0 2 358 1.3E-249 T 22-04-2016 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 3.3E-111 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VP2599 53688fd63b46e10afbbf3d8ecb06cd75 358 PANTHER PTHR30559 2 358 1.3E-249 T 22-04-2016 VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Gene3D G3DSA:3.10.430.100 61 148 5.3E-28 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 SUPERFAMILY SSF55658 1 57 2.27E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 SUPERFAMILY SSF55653 60 148 1.05E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.5E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 1.0E-55 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.19 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Gene3D G3DSA:3.40.5.10 1 52 3.3E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 PANTHER PTHR21368 1 148 4.9E-53 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2737 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.4E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VP2469 3cab1ab8a5f7904af960472cd0464f86 314 Gene3D G3DSA:1.10.357.20 132 312 1.4E-52 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VP2469 3cab1ab8a5f7904af960472cd0464f86 314 SUPERFAMILY SSF161093 132 311 2.22E-44 T 22-04-2016 VP2469 3cab1ab8a5f7904af960472cd0464f86 314 Pfam PF01769 Divalent cation transporter 175 305 4.9E-27 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VP2469 3cab1ab8a5f7904af960472cd0464f86 314 PANTHER PTHR41394 105 314 1.1E-28 T 22-04-2016 VPA0030 634fc4252db261ae92ac84ddc6acebc6 51 Gene3D G3DSA:3.40.190.10 2 29 2.6E-4 T 22-04-2016 VPA0030 634fc4252db261ae92ac84ddc6acebc6 51 SUPERFAMILY SSF53850 3 51 3.44E-8 T 22-04-2016 VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 PANTHER PTHR21666:SF190 467 635 8.8E-77 T 22-04-2016 VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 Gene3D G3DSA:1.25.20.10 33 393 1.2E-107 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 3.1E-24 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 SUPERFAMILY SSF48435 33 481 2.48E-128 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 PANTHER PTHR21666 467 635 8.8E-77 T 22-04-2016 VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 SUPERFAMILY SSF53955 484 643 9.76E-48 T 22-04-2016 IPR023346 Lysozyme-like domain VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 Gene3D G3DSA:1.10.1240.20 410 476 2.5E-27 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 Gene3D G3DSA:1.10.530.10 479 635 6.0E-49 T 22-04-2016 VP0552 852ffbb9af44cad843e5e0b9dc3bb2af 648 Pfam PF01464 Transglycosylase SLT domain 489 600 1.2E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VP2588 3ffdc54628a9a361b7228117933c7e51 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 5.6E-36 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VP2588 3ffdc54628a9a361b7228117933c7e51 192 SUPERFAMILY SSF101327 6 178 4.18E-46 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VP2588 3ffdc54628a9a361b7228117933c7e51 192 PANTHER PTHR37528 1 192 9.5E-41 T 22-04-2016 VP2588 3ffdc54628a9a361b7228117933c7e51 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 33.015 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VP2650 0108ac24f444563df1014be5cb8cc413 137 Gene3D G3DSA:3.30.70.970 9 127 3.1E-50 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VP2650 0108ac24f444563df1014be5cb8cc413 137 PIRSF PIRSF018193 8 137 8.6E-59 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B VP2650 0108ac24f444563df1014be5cb8cc413 137 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.717 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B VP2650 0108ac24f444563df1014be5cb8cc413 137 SUPERFAMILY SSF89946 8 126 3.53E-39 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VP2650 0108ac24f444563df1014be5cb8cc413 137 Pfam PF06877 Regulator of ribonuclease activity B 19 120 9.3E-34 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VP2471 b4f4e0f36e538baedf3a54cd6fe71fbd 429 Pfam PF01551 Peptidase family M23 295 389 2.7E-31 T 22-04-2016 IPR016047 Peptidase M23 VP2471 b4f4e0f36e538baedf3a54cd6fe71fbd 429 PANTHER PTHR21666:SF221 53 413 7.8E-134 T 22-04-2016 VP2471 b4f4e0f36e538baedf3a54cd6fe71fbd 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 3.7E-5 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal VP2471 b4f4e0f36e538baedf3a54cd6fe71fbd 429 SUPERFAMILY SSF51261 144 390 1.46E-71 T 22-04-2016 IPR011055 Duplicated hybrid motif VP2471 b4f4e0f36e538baedf3a54cd6fe71fbd 429 Gene3D G3DSA:2.70.70.10 250 391 2.6E-45 T 22-04-2016 VP2471 b4f4e0f36e538baedf3a54cd6fe71fbd 429 PANTHER PTHR21666 53 413 7.8E-134 T 22-04-2016 VP0420 3166feb14d18fd62d9666a9c9949caeb 511 PANTHER PTHR39569 2 510 3.1E-141 T 22-04-2016 VP0420 3166feb14d18fd62d9666a9c9949caeb 511 Gene3D G3DSA:2.40.320.10 1 216 1.6E-38 T 22-04-2016 IPR023577 CYTH domain VP0420 3166feb14d18fd62d9666a9c9949caeb 511 SMART SM00880 234 502 3.8E-19 T 22-04-2016 IPR007899 CHAD domain VP0420 3166feb14d18fd62d9666a9c9949caeb 511 Pfam PF01928 CYTH domain 3 202 1.5E-32 T 22-04-2016 IPR023577 CYTH domain VP0420 3166feb14d18fd62d9666a9c9949caeb 511 Pfam PF05235 CHAD domain 236 419 7.6E-6 T 22-04-2016 IPR007899 CHAD domain VP0420 3166feb14d18fd62d9666a9c9949caeb 511 SUPERFAMILY SSF55154 1 225 5.89E-52 T 22-04-2016 IPR033469 CYTH-like domain VP0420 3166feb14d18fd62d9666a9c9949caeb 511 PANTHER PTHR39569:SF1 2 510 3.1E-141 T 22-04-2016 VP0420 3166feb14d18fd62d9666a9c9949caeb 511 SMART SM01118 2 208 1.5E-42 T 22-04-2016 IPR023577 CYTH domain VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 PANTHER PTHR11649 1 288 3.5E-87 T 22-04-2016 VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 SUPERFAMILY SSF52540 171 287 3.32E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 SUPERFAMILY SSF52540 104 134 3.32E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 SUPERFAMILY SSF52540 1 128 1.5E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 Gene3D G3DSA:3.40.50.300 173 287 1.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 PANTHER PTHR11649:SF5 1 288 3.5E-87 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 176 196 3.8E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 246 264 3.8E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 Gene3D G3DSA:3.40.50.300 1 125 7.7E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 1 288 6.6E-100 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 Pfam PF01926 50S ribosome-binding GTPase 176 279 1.4E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 Pfam PF01926 50S ribosome-binding GTPase 1 84 2.3E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPA0631 ac261bc6d196d2e4bd1cca40320a3235 288 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 172 276 2.7E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2559 8532f126b03de5368a7b8cd393bfa315 234 PANTHER PTHR32125:SF4 9 233 2.6E-84 T 22-04-2016 VP2559 8532f126b03de5368a7b8cd393bfa315 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 9.3E-78 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2559 8532f126b03de5368a7b8cd393bfa315 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2559 8532f126b03de5368a7b8cd393bfa315 234 SUPERFAMILY SSF53448 9 230 1.69E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP2559 8532f126b03de5368a7b8cd393bfa315 234 PANTHER PTHR32125 9 233 2.6E-84 T 22-04-2016 VP2559 8532f126b03de5368a7b8cd393bfa315 234 Gene3D G3DSA:3.90.550.10 9 232 4.5E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP2559 8532f126b03de5368a7b8cd393bfa315 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 229 2.3E-78 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2559 8532f126b03de5368a7b8cd393bfa315 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 232 32.475 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 SMART SM00419 187 235 4.3E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 SUPERFAMILY SSF51206 23 162 1.44E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 Gene3D G3DSA:2.60.120.10 18 169 4.7E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 SUPERFAMILY SSF46785 165 245 1.95E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 PANTHER PTHR24567 1 248 9.2E-133 T 22-04-2016 VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 PANTHER PTHR24567:SF28 1 248 9.2E-133 T 22-04-2016 VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 SMART SM00100 30 151 2.0E-20 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 Gene3D G3DSA:1.10.10.10 170 244 4.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 2.1E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1536 0943d6a46cf90b8ea7b7c9856640d9af 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.4E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP1161 555bcee78a2dc77382ef0913578fe602 394 SUPERFAMILY SSF46626 307 386 6.92E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1161 555bcee78a2dc77382ef0913578fe602 394 PANTHER PTHR30333 1 394 1.1E-258 T 22-04-2016 VP1161 555bcee78a2dc77382ef0913578fe602 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 3.5E-70 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VP1161 555bcee78a2dc77382ef0913578fe602 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 3.0E-186 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VP1161 555bcee78a2dc77382ef0913578fe602 394 PIRSF PIRSF000014 1 394 1.2E-158 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VP1161 555bcee78a2dc77382ef0913578fe602 394 SUPERFAMILY SSF48695 12 187 7.18E-59 T 22-04-2016 IPR011031 Multihaem cytochrome VP1161 555bcee78a2dc77382ef0913578fe602 394 PANTHER PTHR30333:SF1 1 394 1.1E-258 T 22-04-2016 VP1161 555bcee78a2dc77382ef0913578fe602 394 Gene3D G3DSA:1.10.3820.10 339 345 1.2E-27 T 22-04-2016 VP1161 555bcee78a2dc77382ef0913578fe602 394 Gene3D G3DSA:1.10.3820.10 12 189 1.2E-27 T 22-04-2016 VP1764 f7bfbf1b80c02975d12960c9fc726dc7 295 SUPERFAMILY SSF103481 41 123 3.14E-7 T 22-04-2016 VP1764 f7bfbf1b80c02975d12960c9fc726dc7 295 PANTHER PTHR32322 1 295 5.8E-30 T 22-04-2016 VP1764 f7bfbf1b80c02975d12960c9fc726dc7 295 SUPERFAMILY SSF103481 194 271 3.27E-6 T 22-04-2016 VP1764 f7bfbf1b80c02975d12960c9fc726dc7 295 Pfam PF00892 EamA-like transporter family 140 275 1.4E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VP1764 f7bfbf1b80c02975d12960c9fc726dc7 295 Pfam PF00892 EamA-like transporter family 3 126 6.3E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPA0984 0f6a420a74e4bea4119848194e58b908 252 PANTHER PTHR30029 1 252 2.7E-131 T 22-04-2016 VPA0984 0f6a420a74e4bea4119848194e58b908 252 Pfam PF04293 SpoVR like protein 1 252 2.3E-108 T 22-04-2016 IPR007390 Sporulation stage V, protein R VPA0984 0f6a420a74e4bea4119848194e58b908 252 PANTHER PTHR30029:SF2 1 252 2.7E-131 T 22-04-2016 VP2419 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 177 187 3.3E-10 T 22-04-2016 IPR001775 GspD/PilQ family VP2419 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 3.3E-10 T 22-04-2016 IPR001775 GspD/PilQ family VP2419 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 420 3.3E-10 T 22-04-2016 IPR001775 GspD/PilQ family VP2419 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 383 401 3.3E-10 T 22-04-2016 IPR001775 GspD/PilQ family VP2419 151a71f54a6abacda5a2187b4a56706b 487 Pfam PF00263 Bacterial type II and III secretion system protein 254 417 4.3E-38 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VP2419 151a71f54a6abacda5a2187b4a56706b 487 PANTHER PTHR30332:SF1 154 444 6.4E-57 T 22-04-2016 VP2419 151a71f54a6abacda5a2187b4a56706b 487 PANTHER PTHR30332 154 444 6.4E-57 T 22-04-2016 VP2419 151a71f54a6abacda5a2187b4a56706b 487 Pfam PF13629 Pilus formation protein N terminal region 27 96 2.6E-19 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal VP0070 8405d7b463f482756174ac55b941a9dd 680 Gene3D G3DSA:1.20.1050.40 9 138 3.8E-28 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal VP0070 8405d7b463f482756174ac55b941a9dd 680 PANTHER PTHR11804 2 678 0.0 T 22-04-2016 VP0070 8405d7b463f482756174ac55b941a9dd 680 Pfam PF01432 Peptidase family M3 222 677 6.3E-165 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VP0070 8405d7b463f482756174ac55b941a9dd 680 SUPERFAMILY SSF55486 1 677 8.91E-214 T 22-04-2016 VP0070 8405d7b463f482756174ac55b941a9dd 680 PANTHER PTHR11804:SF8 2 678 0.0 T 22-04-2016 VP0070 8405d7b463f482756174ac55b941a9dd 680 Gene3D G3DSA:3.40.390.10 360 504 1.7E-59 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VP0070 8405d7b463f482756174ac55b941a9dd 680 Gene3D G3DSA:1.10.1370.10 140 349 6.3E-144 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VP0070 8405d7b463f482756174ac55b941a9dd 680 Gene3D G3DSA:1.10.1370.10 505 678 6.3E-144 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 267 35.709 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 Pfam PF01472 PUA domain 286 360 2.0E-23 T 22-04-2016 IPR002478 PUA domain GO:0003723 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 Gene3D G3DSA:2.30.130.10 284 375 6.1E-24 T 22-04-2016 IPR015947 PUA-like domain VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 Pfam PF00696 Amino acid kinase family 15 243 2.3E-41 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 SUPERFAMILY SSF53633 15 265 6.15E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 SUPERFAMILY SSF88697 286 376 6.08E-25 T 22-04-2016 IPR015947 PUA-like domain VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 Gene3D G3DSA:3.40.1160.10 11 268 6.3E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 PIRSF PIRSF000729 9 378 5.0E-137 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 PANTHER PTHR11063 14 379 2.0E-134 T 22-04-2016 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 SMART SM00359 286 369 4.1E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 9.1E-148 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VP0676 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VP1655 e88b25c60d56252b71d2872c451148ef 323 SUPERFAMILY SSF53850 27 322 6.44E-92 T 22-04-2016 VP1655 e88b25c60d56252b71d2872c451148ef 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 5 320 1.1E-121 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VP1655 e88b25c60d56252b71d2872c451148ef 323 PANTHER PTHR30024 7 323 2.0E-99 T 22-04-2016 VP1655 e88b25c60d56252b71d2872c451148ef 323 Pfam PF16868 NMT1-like family 31 320 1.2E-98 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VP1655 e88b25c60d56252b71d2872c451148ef 323 PANTHER PTHR30024:SF13 7 323 2.0E-99 T 22-04-2016 VP1655 e88b25c60d56252b71d2872c451148ef 323 Gene3D G3DSA:3.40.190.10 118 251 4.0E-37 T 22-04-2016 VP1655 e88b25c60d56252b71d2872c451148ef 323 Gene3D G3DSA:3.40.190.10 252 321 2.8E-66 T 22-04-2016 VP1655 e88b25c60d56252b71d2872c451148ef 323 Gene3D G3DSA:3.40.190.10 26 109 2.8E-66 T 22-04-2016 VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 SMART SM00862 150 225 1.3E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 SUPERFAMILY SSF52172 3 183 4.83E-43 T 22-04-2016 IPR011006 CheY-like superfamily VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 PANTHER PTHR26402 3 225 4.6E-152 T 22-04-2016 VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 Gene3D G3DSA:3.40.50.2300 2 124 1.3E-41 T 22-04-2016 VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.9E-113 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.9E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 Gene3D G3DSA:1.10.10.10 129 227 9.0E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 PANTHER PTHR26402:SF576 3 225 4.6E-152 T 22-04-2016 VP0569 2b4a7ed319b95708bc48bfbb61a89ed1 229 SMART SM00448 3 116 1.9E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1304 c0760a1ecef35a04a2750c176e1c1f6c 347 PANTHER PTHR21712:SF4 1 347 3.3E-114 T 22-04-2016 VP1304 c0760a1ecef35a04a2750c176e1c1f6c 347 PANTHER PTHR21712 1 347 3.3E-114 T 22-04-2016 VP1304 c0760a1ecef35a04a2750c176e1c1f6c 347 SUPERFAMILY SSF52733 2 346 4.45E-111 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VP1304 c0760a1ecef35a04a2750c176e1c1f6c 347 Gene3D G3DSA:1.10.1610.10 2 65 4.3E-28 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VP1304 c0760a1ecef35a04a2750c176e1c1f6c 347 Pfam PF02277 Phosphoribosyltransferase 2 345 3.1E-126 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VP1304 c0760a1ecef35a04a2750c176e1c1f6c 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.562 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VP1304 c0760a1ecef35a04a2750c176e1c1f6c 347 Gene3D G3DSA:3.40.50.10210 66 328 4.2E-105 T 22-04-2016 VP1304 c0760a1ecef35a04a2750c176e1c1f6c 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 345 1.8E-128 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VP2845 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50249 70 128 1.93E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2845 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.30.30.30 1 65 1.3E-28 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VP2845 157832b0b04d1ded56020c858776b506 188 PIRSF PIRSF005901 2 188 2.5E-63 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.40.50.140 130 187 1.3E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2845 157832b0b04d1ded56020c858776b506 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.2E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.455 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 SMART SM00841 131 186 3.0E-31 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 PANTHER PTHR30053 1 188 1.9E-89 T 22-04-2016 VP2845 157832b0b04d1ded56020c858776b506 188 SMART SM01185 69 123 9.4E-26 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50249 130 187 4.63E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2845 157832b0b04d1ded56020c858776b506 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 4.3E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.2E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.40.50.140 66 129 1.2E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2845 157832b0b04d1ded56020c858776b506 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.1E-77 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VP2845 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 22-04-2016 IPR008991 Translation protein SH3-like domain VP0835 382c19062eab2660429cb5f9e682eaae 177 Gene3D G3DSA:3.40.50.360 1 171 7.9E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain VP0835 382c19062eab2660429cb5f9e682eaae 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VP0835 382c19062eab2660429cb5f9e682eaae 177 PANTHER PTHR19384:SF77 143 174 1.2E-104 T 22-04-2016 VP0835 382c19062eab2660429cb5f9e682eaae 177 PANTHER PTHR19384:SF77 1 120 1.2E-104 T 22-04-2016 VP0835 382c19062eab2660429cb5f9e682eaae 177 PIRSF PIRSF038996 1 174 2.0E-66 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VP0835 382c19062eab2660429cb5f9e682eaae 177 Pfam PF00258 Flavodoxin 6 162 2.2E-32 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VP0835 382c19062eab2660429cb5f9e682eaae 177 PANTHER PTHR19384 143 174 1.2E-104 T 22-04-2016 VP0835 382c19062eab2660429cb5f9e682eaae 177 PANTHER PTHR19384 1 120 1.2E-104 T 22-04-2016 VP0835 382c19062eab2660429cb5f9e682eaae 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 1.1E-70 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VP0835 382c19062eab2660429cb5f9e682eaae 177 SUPERFAMILY SSF52218 4 172 7.14E-51 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2663 7f19a0a3a457d364d2dcd77b170ad226 263 PANTHER PTHR30188:SF4 4 263 6.6E-121 T 22-04-2016 VP2663 7f19a0a3a457d364d2dcd77b170ad226 263 Pfam PF02405 Permease MlaE 48 259 6.2E-74 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VP2663 7f19a0a3a457d364d2dcd77b170ad226 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 261 1.2E-95 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VP2663 7f19a0a3a457d364d2dcd77b170ad226 263 PANTHER PTHR30188 4 263 6.6E-121 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VP0465 eb8ab778ce474c16cfd2229135590577 305 PANTHER PTHR33694:SF1 1 305 8.6E-143 T 22-04-2016 VP0465 eb8ab778ce474c16cfd2229135590577 305 PANTHER PTHR33694 1 305 8.6E-143 T 22-04-2016 VP0465 eb8ab778ce474c16cfd2229135590577 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 4.5E-143 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VP0465 eb8ab778ce474c16cfd2229135590577 305 SUPERFAMILY SSF54211 3 125 3.57E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0465 eb8ab778ce474c16cfd2229135590577 305 SUPERFAMILY SSF54211 134 278 7.05E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0465 eb8ab778ce474c16cfd2229135590577 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 50.009 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VP0465 eb8ab778ce474c16cfd2229135590577 305 Gene3D G3DSA:3.30.1700.10 129 283 7.7E-63 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VP0465 eb8ab778ce474c16cfd2229135590577 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.5E-109 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VP0465 eb8ab778ce474c16cfd2229135590577 305 Gene3D G3DSA:3.30.230.20 3 126 1.4E-46 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VP0889 015bf232b98922e0036a90d7d1b74931 517 PANTHER PTHR10362:SF7 9 512 2.5E-184 T 22-04-2016 VP0889 015bf232b98922e0036a90d7d1b74931 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VP0889 015bf232b98922e0036a90d7d1b74931 517 SUPERFAMILY SSF48557 5 513 2.83E-172 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VP0889 015bf232b98922e0036a90d7d1b74931 517 Pfam PF00221 Aromatic amino acid lyase 16 469 5.2E-164 T 22-04-2016 IPR001106 Aromatic amino acid lyase VP0889 015bf232b98922e0036a90d7d1b74931 517 PANTHER PTHR10362 9 512 2.5E-184 T 22-04-2016 VP0889 015bf232b98922e0036a90d7d1b74931 517 Gene3D G3DSA:1.20.200.10 204 511 1.3E-101 T 22-04-2016 VP0889 015bf232b98922e0036a90d7d1b74931 517 Gene3D G3DSA:1.10.275.10 3 203 3.7E-65 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VP2107 e288927910891d0203033d57f6e27cc8 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 2.1E-65 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VP2107 e288927910891d0203033d57f6e27cc8 230 PANTHER PTHR30586:SF0 1 220 3.3E-140 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VP2107 e288927910891d0203033d57f6e27cc8 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 7.7E-89 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VP2107 e288927910891d0203033d57f6e27cc8 230 PIRSF PIRSF006102 1 220 8.3E-78 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VP2107 e288927910891d0203033d57f6e27cc8 230 PANTHER PTHR30586 1 220 3.3E-140 T 22-04-2016 VP2107 e288927910891d0203033d57f6e27cc8 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.166 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VP0782 a860373c7a25bb6680408aba2fd72550 259 PANTHER PTHR34933 1 256 9.7E-116 T 22-04-2016 VP0782 a860373c7a25bb6680408aba2fd72550 259 Pfam PF02107 Flagellar L-ring protein 80 257 2.3E-56 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VP0782 a860373c7a25bb6680408aba2fd72550 259 PANTHER PTHR34933:SF2 1 256 9.7E-116 T 22-04-2016 VP0782 a860373c7a25bb6680408aba2fd72550 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.546 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VP0782 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VP0782 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VP0782 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VP0782 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VP0782 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.1490.20 688 744 2.1E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 2.0E-37 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.373 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52335 937 1071 3.53E-34 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VP0471 b00c560b07999768fb93abc43075e0c4 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.102 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52440 556 675 1.87E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP0471 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF56059 673 932 4.95E-103 T 22-04-2016 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:1.10.1030.10 400 538 1.8E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 PANTHER PTHR11405 1 1069 0.0 T 22-04-2016 VP0471 b00c560b07999768fb93abc43075e0c4 1077 PANTHER PTHR11405:SF5 1 1069 0.0 T 22-04-2016 VP0471 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 22-04-2016 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02142 MGS-like domain 956 1041 8.3E-16 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VP0471 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.1380 939 1071 1.8E-38 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VP0471 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF48108 397 554 6.8E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 5.7E-41 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 SMART SM01096 424 547 4.7E-76 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.20 3 108 3.0E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP0471 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.20 539 662 9.0E-61 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP0471 b00c560b07999768fb93abc43075e0c4 1077 SMART SM00851 955 1041 1.3E-25 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VP0471 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VP0471 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52440 1 127 3.74E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP0471 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.470.20 745 932 1.6E-81 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.470.20 200 399 1.5E-74 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP0471 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.1490.20 141 199 2.5E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP1375 7498e65f27be03927575459a8eef5fd7 445 Pfam PF00027 Cyclic nucleotide-binding domain 22 101 2.6E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1375 7498e65f27be03927575459a8eef5fd7 445 PANTHER PTHR24423:SF450 256 441 4.0E-39 T 22-04-2016 VP1375 7498e65f27be03927575459a8eef5fd7 445 PANTHER PTHR24423:SF450 13 18 4.0E-39 T 22-04-2016 VP1375 7498e65f27be03927575459a8eef5fd7 445 PANTHER PTHR24423:SF450 128 181 4.0E-39 T 22-04-2016 VP1375 7498e65f27be03927575459a8eef5fd7 445 SMART SM00100 2 124 0.0017 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1375 7498e65f27be03927575459a8eef5fd7 445 Gene3D G3DSA:3.30.565.10 293 440 1.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1375 7498e65f27be03927575459a8eef5fd7 445 PANTHER PTHR24423 256 441 4.0E-39 T 22-04-2016 VP1375 7498e65f27be03927575459a8eef5fd7 445 PANTHER PTHR24423 13 18 4.0E-39 T 22-04-2016 VP1375 7498e65f27be03927575459a8eef5fd7 445 PANTHER PTHR24423 128 181 4.0E-39 T 22-04-2016 VP1375 7498e65f27be03927575459a8eef5fd7 445 SMART SM00387 329 440 3.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1375 7498e65f27be03927575459a8eef5fd7 445 SUPERFAMILY SSF55874 293 437 6.42E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1375 7498e65f27be03927575459a8eef5fd7 445 SUPERFAMILY SSF51206 19 132 2.88E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP1375 7498e65f27be03927575459a8eef5fd7 445 Gene3D G3DSA:2.60.120.10 19 131 2.0E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1375 7498e65f27be03927575459a8eef5fd7 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 439 6.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1375 7498e65f27be03927575459a8eef5fd7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1375 7498e65f27be03927575459a8eef5fd7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1375 7498e65f27be03927575459a8eef5fd7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1375 7498e65f27be03927575459a8eef5fd7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 SUPERFAMILY SSF52255 2 158 1.07E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 PANTHER PTHR23046 2 161 2.5E-84 T 22-04-2016 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 PANTHER PTHR23046:SF2 2 161 2.5E-84 T 22-04-2016 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 PIRSF PIRSF001338 1 160 1.2E-68 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 4.6E-67 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 Gene3D G3DSA:3.40.50.7700 1 158 2.0E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 Pfam PF00731 AIR carboxylase 2 150 7.3E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 SMART SM01001 1 152 8.6E-104 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VP3036 8cd12974b62ce677a69cb68a926a7cca 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.52 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VP3052 23aa308341066e51723b2b3c515f570d 487 Gene3D G3DSA:1.10.1060.10 239 296 4.3E-7 T 22-04-2016 VP3052 23aa308341066e51723b2b3c515f570d 487 PANTHER PTHR24960 18 409 6.0E-194 T 22-04-2016 VP3052 23aa308341066e51723b2b3c515f570d 487 Pfam PF13746 4Fe-4S dicluster domain 236 340 1.9E-41 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP3052 23aa308341066e51723b2b3c515f570d 487 Gene3D G3DSA:2.60.40.10 370 485 4.7E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold VP3052 23aa308341066e51723b2b3c515f570d 487 SUPERFAMILY SSF54862 121 143 9.21E-33 T 22-04-2016 VP3052 23aa308341066e51723b2b3c515f570d 487 SUPERFAMILY SSF54862 189 363 9.21E-33 T 22-04-2016 VP3052 23aa308341066e51723b2b3c515f570d 487 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 288 299 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP3052 23aa308341066e51723b2b3c515f570d 487 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 372 484 4.3E-29 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain VP3052 23aa308341066e51723b2b3c515f570d 487 PANTHER PTHR24960:SF45 18 409 6.0E-194 T 22-04-2016 VP3052 23aa308341066e51723b2b3c515f570d 487 Pfam PF12801 4Fe-4S binding domain 111 150 2.3E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP3052 23aa308341066e51723b2b3c515f570d 487 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 57 485 2.1E-174 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 VP3052 23aa308341066e51723b2b3c515f570d 487 Gene3D G3DSA:3.30.70.20 297 333 3.8E-6 T 22-04-2016 VP2972 5d783dea095709df5f29df11b74ae32f 407 Gene3D G3DSA:3.20.20.450 81 186 1.1E-13 T 22-04-2016 IPR001633 EAL domain VP2972 5d783dea095709df5f29df11b74ae32f 407 Gene3D G3DSA:1.10.3150.10 187 355 1.3E-31 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VP2972 5d783dea095709df5f29df11b74ae32f 407 PANTHER PTHR33525:SF4 3 373 7.5E-139 T 22-04-2016 VP2972 5d783dea095709df5f29df11b74ae32f 407 SUPERFAMILY SSF141868 4 197 6.02E-28 T 22-04-2016 IPR001633 EAL domain VP2972 5d783dea095709df5f29df11b74ae32f 407 SMART SM00052 2 199 4.3E-4 T 22-04-2016 IPR001633 EAL domain VP2972 5d783dea095709df5f29df11b74ae32f 407 Pfam PF00563 EAL domain 67 194 4.9E-14 T 22-04-2016 IPR001633 EAL domain VP2972 5d783dea095709df5f29df11b74ae32f 407 SUPERFAMILY SSF109604 185 404 5.65E-41 T 22-04-2016 VP2972 5d783dea095709df5f29df11b74ae32f 407 PANTHER PTHR33525 3 373 7.5E-139 T 22-04-2016 VP2972 5d783dea095709df5f29df11b74ae32f 407 Pfam PF08668 HDOD domain 208 324 5.5E-13 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VP2972 5d783dea095709df5f29df11b74ae32f 407 PIRSF PIRSF003180 1 407 1.5E-174 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 Gene3D G3DSA:3.30.565.10 501 668 1.3E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 Pfam PF00672 HAMP domain 326 395 3.2E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 SMART SM00387 558 669 1.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PANTHER PTHR24423:SF532 21 283 8.0E-187 T 22-04-2016 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PANTHER PTHR24423:SF532 444 666 8.0E-187 T 22-04-2016 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PANTHER PTHR24423:SF532 339 395 8.0E-187 T 22-04-2016 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PANTHER PTHR24423 21 283 8.0E-187 T 22-04-2016 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PANTHER PTHR24423 444 666 8.0E-187 T 22-04-2016 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PANTHER PTHR24423 339 395 8.0E-187 T 22-04-2016 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 Pfam PF17202 Single cache domain 3 204 318 5.2E-28 T 22-04-2016 IPR033463 Single cache domain 3 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 Gene3D G3DSA:1.10.287.130 443 500 4.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 SUPERFAMILY SSF55874 505 667 1.23E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 SUPERFAMILY SSF47384 442 512 1.04E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 666 1.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 1.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 1.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 1.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 SMART SM00388 448 515 2.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 668 1.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 513 3.2E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1503 abe68bdadccc0b658555d42d7e9ff09c 679 SUPERFAMILY SSF103190 178 310 2.49E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 Gene3D G3DSA:3.40.50.300 284 451 1.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 Gene3D G3DSA:1.10.8.60 460 519 8.0E-12 T 22-04-2016 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 Gene3D G3DSA:1.10.10.60 520 584 1.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 SUPERFAMILY SSF52540 284 511 2.58E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 4.3E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 4.3E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 PANTHER PTHR32071:SF5 284 584 5.6E-130 T 22-04-2016 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 Pfam PF00158 Sigma-54 interaction domain 285 447 7.2E-61 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 PANTHER PTHR32071 284 584 5.6E-130 T 22-04-2016 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 SUPERFAMILY SSF46689 489 584 2.46E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 SMART SM00382 300 444 1.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 Pfam PF01590 GAF domain 75 186 1.9E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP1704 a3ca1ea99f110cfea69c5022e94610c8 586 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 1.2E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 SUPERFAMILY SSF118215 29 239 4.05E-36 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 Gene3D G3DSA:1.10.3860.10 22 239 2.0E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 PANTHER PTHR11958 1 239 1.8E-92 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 5.4E-19 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 5.4E-19 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 5.4E-19 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 5.4E-19 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 PANTHER PTHR11958:SF5 1 239 1.8E-92 T 22-04-2016 VPA1304 3dda8e53ba5966f2024f4c17e824e876 239 Pfam PF00375 Sodium:dicarboxylate symporter family 32 239 5.8E-39 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 22-04-2016 VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 22-04-2016 IPR000150 Cof protein GO:0016787 VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 7.0E-62 T 22-04-2016 IPR000150 Cof protein GO:0016787 VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 1.7E-69 T 22-04-2016 IPR023214 HAD-like domain VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 SUPERFAMILY SSF56784 12 273 2.31E-68 T 22-04-2016 IPR023214 HAD-like domain VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 Gene3D G3DSA:3.40.50.1000 11 81 3.6E-57 T 22-04-2016 IPR023214 HAD-like domain VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 Gene3D G3DSA:3.40.50.1000 186 274 3.6E-57 T 22-04-2016 IPR023214 HAD-like domain VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 1.6E-35 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 PANTHER PTHR10000:SF20 12 274 3.4E-123 T 22-04-2016 VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 PANTHER PTHR10000 12 274 3.4E-123 T 22-04-2016 VP2975 3cf94051cee52cfef7645184ec5d7f4c 274 Gene3D G3DSA:3.30.1240.10 92 185 4.0E-20 T 22-04-2016 VP2000 795514de97ded26417c8813b4abdf2c7 186 SUPERFAMILY SSF55729 1 155 1.7E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2000 795514de97ded26417c8813b4abdf2c7 186 Gene3D G3DSA:3.40.630.30 5 172 7.5E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2000 795514de97ded26417c8813b4abdf2c7 186 PANTHER PTHR13256 2 177 4.0E-19 T 22-04-2016 VP2000 795514de97ded26417c8813b4abdf2c7 186 Pfam PF13302 Acetyltransferase (GNAT) domain 10 146 2.1E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2683 0c68b27cc912be1753e8a9be40e748c2 458 SUPERFAMILY SSF88723 7 68 4.12E-14 T 22-04-2016 IPR029060 PIN domain-like VP2683 0c68b27cc912be1753e8a9be40e748c2 458 SUPERFAMILY SSF88723 104 160 4.12E-14 T 22-04-2016 IPR029060 PIN domain-like VP2683 0c68b27cc912be1753e8a9be40e748c2 458 PANTHER PTHR30473:SF2 6 182 2.2E-202 T 22-04-2016 VP2683 0c68b27cc912be1753e8a9be40e748c2 458 PANTHER PTHR30473:SF2 200 458 2.2E-202 T 22-04-2016 VP2683 0c68b27cc912be1753e8a9be40e748c2 458 Gene3D G3DSA:3.40.50.1010 9 67 1.9E-15 T 22-04-2016 IPR029060 PIN domain-like VP2683 0c68b27cc912be1753e8a9be40e748c2 458 Gene3D G3DSA:3.40.50.1010 104 151 1.9E-15 T 22-04-2016 IPR029060 PIN domain-like VP2683 0c68b27cc912be1753e8a9be40e748c2 458 Gene3D G3DSA:3.40.50.300 246 456 4.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2683 0c68b27cc912be1753e8a9be40e748c2 458 SUPERFAMILY SSF52540 247 437 1.45E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2683 0c68b27cc912be1753e8a9be40e748c2 458 Pfam PF13638 PIN domain 9 150 6.5E-35 T 22-04-2016 IPR002716 PIN domain VP2683 0c68b27cc912be1753e8a9be40e748c2 458 PANTHER PTHR30473 6 182 2.2E-202 T 22-04-2016 VP2683 0c68b27cc912be1753e8a9be40e748c2 458 PANTHER PTHR30473 200 458 2.2E-202 T 22-04-2016 VP2683 0c68b27cc912be1753e8a9be40e748c2 458 SMART SM00670 7 141 1.8E-10 T 22-04-2016 IPR002716 PIN domain VP2683 0c68b27cc912be1753e8a9be40e748c2 458 Pfam PF02562 PhoH-like protein 248 452 9.5E-54 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 VP1185 2f81ab1155f1158311f75705332aa24e 539 SUPERFAMILY SSF58104 234 538 2.22E-72 T 22-04-2016 VP1185 2f81ab1155f1158311f75705332aa24e 539 SMART SM00283 276 537 5.0E-73 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1185 2f81ab1155f1158311f75705332aa24e 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 6.0E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP1185 2f81ab1155f1158311f75705332aa24e 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 6.0E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP1185 2f81ab1155f1158311f75705332aa24e 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 536 1.7E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1185 2f81ab1155f1158311f75705332aa24e 539 Pfam PF00672 HAMP domain 190 256 5.8E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1185 2f81ab1155f1158311f75705332aa24e 539 SMART SM00304 208 261 3.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1185 2f81ab1155f1158311f75705332aa24e 539 PANTHER PTHR32089 22 162 4.5E-103 T 22-04-2016 VP1185 2f81ab1155f1158311f75705332aa24e 539 PANTHER PTHR32089 182 539 4.5E-103 T 22-04-2016 VP1185 2f81ab1155f1158311f75705332aa24e 539 Gene3D G3DSA:1.10.287.950 291 505 4.1E-54 T 22-04-2016 VP0127 4a8cf08d817675a862fcc3a966f69db4 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 6.1E-53 T 22-04-2016 IPR012660 Thioesterase, putative VP0127 4a8cf08d817675a862fcc3a966f69db4 305 SUPERFAMILY SSF55729 2 157 8.68E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0127 4a8cf08d817675a862fcc3a966f69db4 305 PANTHER PTHR13355:SF8 4 160 1.6E-71 T 22-04-2016 VP0127 4a8cf08d817675a862fcc3a966f69db4 305 SUPERFAMILY SSF54637 154 296 2.95E-40 T 22-04-2016 IPR029069 HotDog domain VP0127 4a8cf08d817675a862fcc3a966f69db4 305 Pfam PF00583 Acetyltransferase (GNAT) family 53 123 2.7E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP0127 4a8cf08d817675a862fcc3a966f69db4 305 Gene3D G3DSA:3.10.129.10 145 297 2.0E-65 T 22-04-2016 IPR029069 HotDog domain VP0127 4a8cf08d817675a862fcc3a966f69db4 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 1.4E-45 T 22-04-2016 IPR012660 Thioesterase, putative VP0127 4a8cf08d817675a862fcc3a966f69db4 305 Gene3D G3DSA:3.40.630.30 5 144 7.9E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0127 4a8cf08d817675a862fcc3a966f69db4 305 PANTHER PTHR13355 4 160 1.6E-71 T 22-04-2016 VP1624 c5bce57ffe724b3b0c85f2afd92cc219 222 PANTHER PTHR23291 1 222 1.4E-107 T 22-04-2016 IPR006214 Bax inhibitor 1-related VP1624 c5bce57ffe724b3b0c85f2afd92cc219 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 4.0E-45 T 22-04-2016 VP1624 c5bce57ffe724b3b0c85f2afd92cc219 222 PANTHER PTHR23291:SF37 1 222 1.4E-107 T 22-04-2016 VP1142 283a98512b5c0fd34252134dea99ea2c 245 SUPERFAMILY SSF51366 2 242 3.97E-64 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VP1142 283a98512b5c0fd34252134dea99ea2c 245 Pfam PF00977 Histidine biosynthesis protein 2 234 4.1E-76 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VP1142 283a98512b5c0fd34252134dea99ea2c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 9.4E-78 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VP1142 283a98512b5c0fd34252134dea99ea2c 245 PANTHER PTHR21235:SF15 2 245 3.1E-110 T 22-04-2016 VP1142 283a98512b5c0fd34252134dea99ea2c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.662 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VP1142 283a98512b5c0fd34252134dea99ea2c 245 PANTHER PTHR21235 2 245 3.1E-110 T 22-04-2016 VP1142 283a98512b5c0fd34252134dea99ea2c 245 Gene3D G3DSA:3.20.20.70 2 242 5.8E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 Pfam PF00849 RNA pseudouridylate synthase 68 201 6.7E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 SMART SM00363 3 61 3.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 Gene3D G3DSA:3.10.290.10 3 59 8.7E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 Pfam PF01479 S4 domain 4 43 4.1E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 SUPERFAMILY SSF55174 4 96 5.72E-12 T 22-04-2016 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 PANTHER PTHR21600:SF2 1 309 1.7E-100 T 22-04-2016 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 7.2E-55 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 PANTHER PTHR21600 1 309 1.7E-100 T 22-04-2016 VP1951 2f7ac4df8b19b4c386c13dea0d7667a3 312 SUPERFAMILY SSF55120 68 237 1.3E-42 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1909 d364228ba212c6601cc4de9ba043b7e2 428 PANTHER PTHR33362:SF7 1 424 1.3E-240 T 22-04-2016 VP1909 d364228ba212c6601cc4de9ba043b7e2 428 PANTHER PTHR33362 1 424 1.3E-240 T 22-04-2016 VP1909 d364228ba212c6601cc4de9ba043b7e2 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 4.9E-100 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VP1909 d364228ba212c6601cc4de9ba043b7e2 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 8.4E-106 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VP1909 d364228ba212c6601cc4de9ba043b7e2 428 PIRSF PIRSF006066 1 427 9.8E-75 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VP1768 8f1e3af9949cb2dc8bfae3200f1fdb47 502 PANTHER PTHR33121:SF1 6 497 2.9E-143 T 22-04-2016 VP1768 8f1e3af9949cb2dc8bfae3200f1fdb47 502 Gene3D G3DSA:3.20.20.450 263 496 7.5E-64 T 22-04-2016 IPR001633 EAL domain VP1768 8f1e3af9949cb2dc8bfae3200f1fdb47 502 SUPERFAMILY SSF141868 264 496 3.66E-64 T 22-04-2016 IPR001633 EAL domain VP1768 8f1e3af9949cb2dc8bfae3200f1fdb47 502 SMART SM00052 256 494 4.5E-66 T 22-04-2016 IPR001633 EAL domain VP1768 8f1e3af9949cb2dc8bfae3200f1fdb47 502 Pfam PF00563 EAL domain 264 489 1.7E-52 T 22-04-2016 IPR001633 EAL domain VP1768 8f1e3af9949cb2dc8bfae3200f1fdb47 502 PANTHER PTHR33121 6 497 2.9E-143 T 22-04-2016 VP0288 440b7552ea167ede42854c0b1e037308 459 PANTHER PTHR24031 4 443 5.0E-252 T 22-04-2016 VP0288 440b7552ea167ede42854c0b1e037308 459 SMART SM00487 23 225 2.8E-57 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP0288 440b7552ea167ede42854c0b1e037308 459 SMART SM00490 257 338 1.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal VP0288 440b7552ea167ede42854c0b1e037308 459 Pfam PF03880 DbpA RNA binding domain 386 456 3.1E-21 T 22-04-2016 IPR005580 DbpA, RNA-binding domain VP0288 440b7552ea167ede42854c0b1e037308 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 2.7E-26 T 22-04-2016 IPR001650 Helicase, C-terminal VP0288 440b7552ea167ede42854c0b1e037308 459 Gene3D G3DSA:3.40.50.300 206 365 5.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0288 440b7552ea167ede42854c0b1e037308 459 PANTHER PTHR24031:SF180 4 443 5.0E-252 T 22-04-2016 VP0288 440b7552ea167ede42854c0b1e037308 459 Gene3D G3DSA:3.40.50.300 3 205 6.0E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0288 440b7552ea167ede42854c0b1e037308 459 SUPERFAMILY SSF52540 73 357 1.87E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0288 440b7552ea167ede42854c0b1e037308 459 Pfam PF00270 DEAD/DEAH box helicase 28 195 2.9E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP0288 440b7552ea167ede42854c0b1e037308 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 PANTHER PTHR21015 6 355 8.2E-130 T 22-04-2016 VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 Gene3D G3DSA:3.40.50.2000 253 334 5.6E-7 T 22-04-2016 VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 1.7E-118 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 2.1E-47 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 Gene3D G3DSA:3.40.50.2000 1 195 1.5E-76 T 22-04-2016 VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 SUPERFAMILY SSF53756 5 352 6.28E-128 T 22-04-2016 VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.894 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 2.6E-34 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0460 ddbf60bd987f1de62c1f7196bbf760fe 355 PANTHER PTHR21015:SF22 6 355 8.2E-130 T 22-04-2016 VP2745 6ffdba2debfc527604d0c738c96220dd 172 SUPERFAMILY SSF52540 4 169 6.92E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2745 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 22-04-2016 VP2745 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 22-04-2016 VP2745 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 22-04-2016 VP2745 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 22-04-2016 VP2745 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 22-04-2016 VP2745 6ffdba2debfc527604d0c738c96220dd 172 PANTHER PTHR21087 1 171 4.5E-75 T 22-04-2016 VP2745 6ffdba2debfc527604d0c738c96220dd 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 30.116 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2745 6ffdba2debfc527604d0c738c96220dd 172 Pfam PF01202 Shikimate kinase 13 169 1.5E-57 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2745 6ffdba2debfc527604d0c738c96220dd 172 Gene3D G3DSA:3.40.50.300 2 171 4.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2745 6ffdba2debfc527604d0c738c96220dd 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 PANTHER PTHR30118 1 298 3.6E-69 T 22-04-2016 VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 SUPERFAMILY SSF53850 94 299 7.24E-37 T 22-04-2016 VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 Pfam PF03466 LysR substrate binding domain 100 290 2.5E-25 T 22-04-2016 IPR005119 LysR, substrate-binding VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 Gene3D G3DSA:3.40.190.10 177 272 5.7E-19 T 22-04-2016 VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 Gene3D G3DSA:1.10.10.10 6 86 2.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 Gene3D G3DSA:3.40.190.10 94 176 2.2E-25 T 22-04-2016 VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 Gene3D G3DSA:3.40.190.10 277 303 2.2E-25 T 22-04-2016 VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 SUPERFAMILY SSF46785 7 85 4.76E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 PANTHER PTHR30118:SF8 1 298 3.6E-69 T 22-04-2016 VP2406 dc841893d48b70d06d4d60daf5c61c3b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 3.8E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2715 54f817c2bece183e2e582b955f73ad37 450 SUPERFAMILY SSF55021 297 394 1.41E-20 T 22-04-2016 VP2715 54f817c2bece183e2e582b955f73ad37 450 SUPERFAMILY SSF53633 6 293 1.27E-77 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2715 54f817c2bece183e2e582b955f73ad37 450 Pfam PF00696 Amino acid kinase family 6 278 2.5E-48 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2715 54f817c2bece183e2e582b955f73ad37 450 SUPERFAMILY SSF55021 377 449 5.67E-16 T 22-04-2016 VP2715 54f817c2bece183e2e582b955f73ad37 450 PANTHER PTHR21499:SF3 6 450 2.2E-146 T 22-04-2016 VP2715 54f817c2bece183e2e582b955f73ad37 450 PANTHER PTHR21499 6 450 2.2E-146 T 22-04-2016 VP2715 54f817c2bece183e2e582b955f73ad37 450 PIRSF PIRSF000726 2 450 5.5E-131 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2715 54f817c2bece183e2e582b955f73ad37 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.0E-123 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2715 54f817c2bece183e2e582b955f73ad37 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 3.6E-123 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2715 54f817c2bece183e2e582b955f73ad37 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2715 54f817c2bece183e2e582b955f73ad37 450 Gene3D G3DSA:3.40.1160.10 6 53 1.7E-61 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2715 54f817c2bece183e2e582b955f73ad37 450 Gene3D G3DSA:3.40.1160.10 107 294 1.7E-61 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP0741 8f5aed3313d82ab11d2ea14de58d38bf 212 Pfam PF03550 Outer membrane lipoprotein LolB 52 208 3.3E-43 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VP0741 8f5aed3313d82ab11d2ea14de58d38bf 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 12 209 3.7E-37 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VP0741 8f5aed3313d82ab11d2ea14de58d38bf 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 11 210 26.528 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VP0741 8f5aed3313d82ab11d2ea14de58d38bf 212 PANTHER PTHR30634:SF11 8 212 2.5E-32 T 22-04-2016 VP0741 8f5aed3313d82ab11d2ea14de58d38bf 212 PANTHER PTHR30634 8 212 2.5E-32 T 22-04-2016 VP0741 8f5aed3313d82ab11d2ea14de58d38bf 212 Gene3D G3DSA:2.50.20.10 21 210 4.5E-61 T 22-04-2016 VP0741 8f5aed3313d82ab11d2ea14de58d38bf 212 SUPERFAMILY SSF89392 27 210 7.06E-49 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VPA0132 9f4bac4d6c9d7bd52a39f4602f032112 220 Gene3D G3DSA:3.30.70.270 6 77 6.0E-7 T 22-04-2016 VPA0132 9f4bac4d6c9d7bd52a39f4602f032112 220 SUPERFAMILY SSF141868 90 218 3.4E-35 T 22-04-2016 IPR001633 EAL domain VPA0132 9f4bac4d6c9d7bd52a39f4602f032112 220 PANTHER PTHR33121 69 220 4.5E-36 T 22-04-2016 VPA0132 9f4bac4d6c9d7bd52a39f4602f032112 220 PANTHER PTHR33121:SF13 69 220 4.5E-36 T 22-04-2016 VPA0132 9f4bac4d6c9d7bd52a39f4602f032112 220 SMART SM00052 82 220 1.6E-9 T 22-04-2016 IPR001633 EAL domain VPA0132 9f4bac4d6c9d7bd52a39f4602f032112 220 Pfam PF00563 EAL domain 90 217 4.6E-30 T 22-04-2016 IPR001633 EAL domain VPA0132 9f4bac4d6c9d7bd52a39f4602f032112 220 SUPERFAMILY SSF55073 6 74 5.1E-7 T 22-04-2016 IPR029787 Nucleotide cyclase VPA0132 9f4bac4d6c9d7bd52a39f4602f032112 220 Gene3D G3DSA:3.20.20.450 85 218 2.5E-38 T 22-04-2016 IPR001633 EAL domain VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 SUPERFAMILY SSF52540 6 223 1.17E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 SMART SM00490 141 222 1.3E-31 T 22-04-2016 IPR001650 Helicase, C-terminal VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 Gene3D G3DSA:3.40.50.300 95 223 2.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 Pfam PF00270 DEAD/DEAH box helicase 6 76 8.9E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 Gene3D G3DSA:3.40.50.300 3 94 5.2E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 PANTHER PTHR24031:SF334 1 223 2.3E-110 T 22-04-2016 VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 35 43 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 PANTHER PTHR24031 1 223 2.3E-110 T 22-04-2016 VPA0514 2c0c1c0918278cb5e6979c5a353d0bb0 223 Pfam PF00271 Helicase conserved C-terminal domain 116 222 2.3E-31 T 22-04-2016 IPR001650 Helicase, C-terminal VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 PANTHER PTHR30244 2 384 4.2E-148 T 22-04-2016 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:1.20.1330.10 286 339 2.3E-59 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:1.20.1330.10 54 171 2.3E-59 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 37 54 2.4E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 76 95 2.4E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 111 134 2.4E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF07196 Flagellin hook IN motif 195 252 1.2E-10 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.2E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 SUPERFAMILY SSF64518 1 384 3.14E-97 T 22-04-2016 VP0788 ccf936d351bd4ffecb37b5e94aeacafd 384 PANTHER PTHR30244:SF1 2 384 4.2E-148 T 22-04-2016 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.0E-179 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF47446 329 430 7.19E-38 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02978 Signal peptide binding domain 329 427 4.1E-33 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00962 100 296 7.1E-115 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.20.120.140 2 89 6.0E-36 T 22-04-2016 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00382 99 247 1.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:3.40.50.300 93 297 4.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00963 1 86 5.3E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF52540 42 353 1.38E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 PANTHER PTHR11564 1 435 1.2E-273 T 22-04-2016 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.0E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 PANTHER PTHR11564:SF7 1 435 1.2E-273 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.10.260.30 329 432 3.3E-41 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VP2534 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.4E-73 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VP2948 bc8ae4ede0ab64307ebdf69687443da8 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 1.0E-108 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 VP2948 bc8ae4ede0ab64307ebdf69687443da8 284 Pfam PF01040 UbiA prenyltransferase family 24 266 5.4E-70 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VP2948 bc8ae4ede0ab64307ebdf69687443da8 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.74 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 VP2948 bc8ae4ede0ab64307ebdf69687443da8 284 PANTHER PTHR11048 1 281 1.4E-89 T 22-04-2016 VP2289 edc374579f668b59806d614d2ce01015 814 PANTHER PTHR10909 50 532 7.9E-295 T 22-04-2016 VP2289 edc374579f668b59806d614d2ce01015 814 PANTHER PTHR10909:SF321 50 532 7.9E-295 T 22-04-2016 VP2289 edc374579f668b59806d614d2ce01015 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 4.8E-13 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VP2289 edc374579f668b59806d614d2ce01015 814 Gene3D G3DSA:2.40.110.10 238 349 5.7E-16 T 22-04-2016 VP2289 edc374579f668b59806d614d2ce01015 814 Gene3D G3DSA:1.10.540.10 96 235 2.7E-29 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VP2289 edc374579f668b59806d614d2ce01015 814 SUPERFAMILY SSF56645 121 356 5.1E-43 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VP2289 edc374579f668b59806d614d2ce01015 814 Gene3D G3DSA:1.20.140.10 350 508 7.4E-24 T 22-04-2016 VP2289 edc374579f668b59806d614d2ce01015 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 234 1.7E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VP2289 edc374579f668b59806d614d2ce01015 814 SUPERFAMILY SSF47203 361 508 4.03E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VP2289 edc374579f668b59806d614d2ce01015 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.1E-116 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VP2397 63bab324e58ef1b35b4fe2126e753178 343 PIRSF PIRSF005096 2 343 1.2E-117 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VP2397 63bab324e58ef1b35b4fe2126e753178 343 SUPERFAMILY SSF74650 6 341 1.26E-111 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VP2397 63bab324e58ef1b35b4fe2126e753178 343 Pfam PF01263 Aldose 1-epimerase 14 340 4.0E-94 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VP2397 63bab324e58ef1b35b4fe2126e753178 343 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 9 342 2.9E-151 T 22-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VP2397 63bab324e58ef1b35b4fe2126e753178 343 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 167 176 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VP2397 63bab324e58ef1b35b4fe2126e753178 343 PANTHER PTHR10091 8 343 1.3E-137 T 22-04-2016 VP2397 63bab324e58ef1b35b4fe2126e753178 343 Gene3D G3DSA:2.70.98.10 7 342 1.3E-124 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VP2397 63bab324e58ef1b35b4fe2126e753178 343 PANTHER PTHR10091:SF0 8 343 1.3E-137 T 22-04-2016 VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 PANTHER PTHR23152 5 941 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.9E-55 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.1E-13 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 SMART SM00861 594 787 4.0E-64 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 Pfam PF00676 Dehydrogenase E1 component 221 514 2.0E-48 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 SUPERFAMILY SSF52518 122 532 4.49E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 PIRSF PIRSF000157 1 935 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 Gene3D G3DSA:3.40.50.970 163 549 9.8E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 PANTHER PTHR23152:SF4 5 941 0.0 T 22-04-2016 VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 SUPERFAMILY SSF52518 577 794 3.62E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 8.4E-67 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VP0847 fb1ba2e85113089b8b138133ba4b16c9 941 Gene3D G3DSA:3.40.50.970 592 793 1.4E-26 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2427 ebe9df2b47155edec4c7babb02d891a6 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 3.6E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2427 ebe9df2b47155edec4c7babb02d891a6 308 Gene3D G3DSA:3.40.190.10 178 256 1.4E-10 T 22-04-2016 VP2427 ebe9df2b47155edec4c7babb02d891a6 308 Gene3D G3DSA:3.40.190.10 95 177 2.1E-28 T 22-04-2016 VP2427 ebe9df2b47155edec4c7babb02d891a6 308 PANTHER PTHR30537:SF26 1 307 2.0E-82 T 22-04-2016 VP2427 ebe9df2b47155edec4c7babb02d891a6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2427 ebe9df2b47155edec4c7babb02d891a6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2427 ebe9df2b47155edec4c7babb02d891a6 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2427 ebe9df2b47155edec4c7babb02d891a6 308 SUPERFAMILY SSF46785 4 87 1.18E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2427 ebe9df2b47155edec4c7babb02d891a6 308 Pfam PF03466 LysR substrate binding domain 94 289 4.7E-29 T 22-04-2016 IPR005119 LysR, substrate-binding VP2427 ebe9df2b47155edec4c7babb02d891a6 308 SUPERFAMILY SSF53850 95 292 1.72E-35 T 22-04-2016 VP2427 ebe9df2b47155edec4c7babb02d891a6 308 Gene3D G3DSA:1.10.10.10 5 84 4.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2427 ebe9df2b47155edec4c7babb02d891a6 308 PANTHER PTHR30537 1 307 2.0E-82 T 22-04-2016 VP0526 601be99eae0df4e730b28a4f2e2e918a 382 PANTHER PTHR10010 19 381 7.1E-128 T 22-04-2016 VP0526 601be99eae0df4e730b28a4f2e2e918a 382 PANTHER PTHR10010:SF8 19 381 7.1E-128 T 22-04-2016 IPR030147 Sodium-dependent phosphate transporter NptA-like GO:0015114|GO:0035435 VP0526 601be99eae0df4e730b28a4f2e2e918a 382 Pfam PF02690 Na+/Pi-cotransporter 218 328 1.2E-18 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VP0526 601be99eae0df4e730b28a4f2e2e918a 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 8.4E-24 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VP1728 5d84625dd23f2e5d4086f565dc67878a 335 Gene3D G3DSA:3.40.190.10 268 334 4.7E-52 T 22-04-2016 VP1728 5d84625dd23f2e5d4086f565dc67878a 335 Gene3D G3DSA:3.40.190.10 28 116 4.7E-52 T 22-04-2016 VP1728 5d84625dd23f2e5d4086f565dc67878a 335 SUPERFAMILY SSF53850 28 332 1.6E-86 T 22-04-2016 VP1728 5d84625dd23f2e5d4086f565dc67878a 335 Gene3D G3DSA:3.40.190.100 117 267 8.9E-53 T 22-04-2016 VP1728 5d84625dd23f2e5d4086f565dc67878a 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 317 8.7E-50 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 VP1712 4881299991ca6777e65edc54cefad11e 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 5.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1712 4881299991ca6777e65edc54cefad11e 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 5.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1712 4881299991ca6777e65edc54cefad11e 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 5.9E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1712 4881299991ca6777e65edc54cefad11e 539 Pfam PF00989 PAS fold 214 277 5.7E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 VP1712 4881299991ca6777e65edc54cefad11e 539 PANTHER PTHR24423:SF487 87 158 6.2E-101 T 22-04-2016 VP1712 4881299991ca6777e65edc54cefad11e 539 PANTHER PTHR24423:SF487 191 539 6.2E-101 T 22-04-2016 VP1712 4881299991ca6777e65edc54cefad11e 539 SUPERFAMILY SSF55890 322 390 1.22E-9 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VP1712 4881299991ca6777e65edc54cefad11e 539 PANTHER PTHR24423 87 158 6.2E-101 T 22-04-2016 VP1712 4881299991ca6777e65edc54cefad11e 539 PANTHER PTHR24423 191 539 6.2E-101 T 22-04-2016 VP1712 4881299991ca6777e65edc54cefad11e 539 SUPERFAMILY SSF55785 215 306 2.97E-11 T 22-04-2016 IPR000014 PAS domain VP1712 4881299991ca6777e65edc54cefad11e 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 319 373 7.3E-10 T 22-04-2016 VP1712 4881299991ca6777e65edc54cefad11e 539 Gene3D G3DSA:3.30.450.20 33 171 1.5E-47 T 22-04-2016 VP1712 4881299991ca6777e65edc54cefad11e 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 536 8.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1712 4881299991ca6777e65edc54cefad11e 539 Gene3D G3DSA:1.10.287.130 310 377 3.2E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1712 4881299991ca6777e65edc54cefad11e 539 Pfam PF17203 Single cache domain 3 39 168 3.0E-19 T 22-04-2016 IPR033463 Single cache domain 3 VP1712 4881299991ca6777e65edc54cefad11e 539 SUPERFAMILY SSF55874 388 534 1.1E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1712 4881299991ca6777e65edc54cefad11e 539 SMART SM00091 213 279 5.6E-5 T 22-04-2016 IPR000014 PAS domain VP1712 4881299991ca6777e65edc54cefad11e 539 SUPERFAMILY SSF103190 40 169 5.89E-35 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VP1712 4881299991ca6777e65edc54cefad11e 539 SMART SM00387 418 537 2.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1712 4881299991ca6777e65edc54cefad11e 539 Gene3D G3DSA:3.30.450.20 219 309 6.6E-10 T 22-04-2016 VP1712 4881299991ca6777e65edc54cefad11e 539 Gene3D G3DSA:3.30.565.10 388 534 7.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2451 06b629edde305c2744591c7f44572adb 306 SMART SM00028 66 99 0.057 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2451 06b629edde305c2744591c7f44572adb 306 SMART SM00028 100 133 0.0059 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2451 06b629edde305c2744591c7f44572adb 306 SMART SM00028 134 167 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2451 06b629edde305c2744591c7f44572adb 306 SMART SM00028 238 271 45.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2451 06b629edde305c2744591c7f44572adb 306 SUPERFAMILY SSF48452 34 286 4.67E-69 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2451 06b629edde305c2744591c7f44572adb 306 PIRSF PIRSF004654 1 296 2.9E-91 T 22-04-2016 IPR023605 Lipoprotein NlpI VP2451 06b629edde305c2744591c7f44572adb 306 PANTHER PTHR23083 48 291 7.0E-22 T 22-04-2016 VP2451 06b629edde305c2744591c7f44572adb 306 Gene3D G3DSA:1.25.40.10 49 293 3.1E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1731 15651c3c0b3271d1f0cd723730b93c4d 227 Pfam PF14518 Iron-containing redox enzyme 40 211 3.6E-26 T 22-04-2016 IPR028201 PqqC-like protein VP1731 15651c3c0b3271d1f0cd723730b93c4d 227 SMART SM01236 74 175 5.5E-8 T 22-04-2016 VP1731 15651c3c0b3271d1f0cd723730b93c4d 227 Gene3D G3DSA:1.20.910.10 4 216 1.3E-14 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 VP1731 15651c3c0b3271d1f0cd723730b93c4d 227 SUPERFAMILY SSF48613 3 219 2.23E-58 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 VP2853 4dee292431f5075960ad5474e808e7d2 460 Pfam PF01554 MatE 255 416 5.0E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2853 4dee292431f5075960ad5474e808e7d2 460 Pfam PF01554 MatE 32 191 1.0E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2853 4dee292431f5075960ad5474e808e7d2 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 423 2.3E-57 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2853 4dee292431f5075960ad5474e808e7d2 460 PIRSF PIRSF006603 6 459 1.6E-132 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2853 4dee292431f5075960ad5474e808e7d2 460 PANTHER PTHR11206 13 456 2.2E-230 T 22-04-2016 VP2853 4dee292431f5075960ad5474e808e7d2 460 PANTHER PTHR11206:SF142 13 456 2.2E-230 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 SMART SM00487 150 342 3.8E-15 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 SUPERFAMILY SSF52540 482 649 2.59E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 SUPERFAMILY SSF52540 273 337 2.59E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799:SF610 800 841 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799:SF610 874 950 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799:SF610 150 354 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799:SF610 1 9 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799:SF610 402 695 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 8.3E-15 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 SMART SM00490 519 603 2.7E-17 T 22-04-2016 IPR001650 Helicase, C-terminal VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799 800 841 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799 874 950 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799 150 354 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799 1 9 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 PANTHER PTHR10799 402 695 2.0E-250 T 22-04-2016 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 71.831 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 Gene3D G3DSA:3.40.50.300 486 606 1.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 5.0E-16 T 22-04-2016 IPR001650 Helicase, C-terminal VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.1E-148 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 SUPERFAMILY SSF52540 127 378 1.46E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2682 f357059d8c5d6d7059eb7fbb93ea84c0 969 Gene3D G3DSA:3.40.50.300 164 318 1.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1666 1538b498aa84693bc39b42af76a213f3 94 Pfam PF09059 TyeA 6 86 2.7E-33 T 22-04-2016 IPR015144 Type III secretion system effector delivery regulator TyeA VP1666 1538b498aa84693bc39b42af76a213f3 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 7.0E-37 T 22-04-2016 IPR015144 Type III secretion system effector delivery regulator TyeA VP1666 1538b498aa84693bc39b42af76a213f3 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 1.8E-25 T 22-04-2016 IPR013351 Type III secretion system effector delivery regulator TyeA-related VP1666 1538b498aa84693bc39b42af76a213f3 94 SUPERFAMILY SSF140591 2 92 5.1E-30 T 22-04-2016 VP2021 850a465fe03d269672838446b3409e72 222 Pfam PF09335 SNARE associated Golgi protein 62 177 3.9E-18 T 22-04-2016 IPR032816 SNARE associated Golgi protein VP2021 850a465fe03d269672838446b3409e72 222 PANTHER PTHR12677 1 221 8.1E-25 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VP2295 2b11ab47a26f662613e9d2f96e215a31 252 PANTHER PTHR11935:SF7 2 252 2.7E-96 T 22-04-2016 VP2295 2b11ab47a26f662613e9d2f96e215a31 252 SUPERFAMILY SSF56281 2 252 9.96E-70 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP2295 2b11ab47a26f662613e9d2f96e215a31 252 PIRSF PIRSF005457 1 252 6.0E-99 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VP2295 2b11ab47a26f662613e9d2f96e215a31 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.7E-103 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VP2295 2b11ab47a26f662613e9d2f96e215a31 252 Gene3D G3DSA:3.60.15.10 4 252 1.2E-85 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP2295 2b11ab47a26f662613e9d2f96e215a31 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 2.4E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP2295 2b11ab47a26f662613e9d2f96e215a31 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.466 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VP2295 2b11ab47a26f662613e9d2f96e215a31 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 1.6E-26 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VP2295 2b11ab47a26f662613e9d2f96e215a31 252 SMART SM00849 12 166 2.2E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP2295 2b11ab47a26f662613e9d2f96e215a31 252 PANTHER PTHR11935 2 252 2.7E-96 T 22-04-2016 VP2646 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF46589 885 949 8.89E-18 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.1E-222 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:3.90.740.10 194 360 2.9E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PANTHER PTHR11946:SF5 881 945 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PANTHER PTHR11946:SF5 608 861 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PANTHER PTHR11946:SF5 1 314 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PANTHER PTHR11946:SF5 333 570 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF47323 642 899 5.98E-66 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.042 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 5.0E-39 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:3.40.50.620 609 630 2.5E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2646 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:3.40.50.620 3 193 2.5E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2646 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:3.40.50.620 364 571 2.5E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2646 472207b5ceb69318a610d3df012dd81e 952 PANTHER PTHR11946 881 945 0.0 T 22-04-2016 VP2646 472207b5ceb69318a610d3df012dd81e 952 PANTHER PTHR11946 608 861 0.0 T 22-04-2016 VP2646 472207b5ceb69318a610d3df012dd81e 952 PANTHER PTHR11946 1 314 0.0 T 22-04-2016 VP2646 472207b5ceb69318a610d3df012dd81e 952 PANTHER PTHR11946 333 570 0.0 T 22-04-2016 VP2646 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:1.10.287.380 879 943 1.2E-5 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VP2646 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:1.10.730.10 631 816 2.6E-59 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF50677 191 365 4.84E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VP2646 472207b5ceb69318a610d3df012dd81e 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 6.7E-18 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VP2646 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF52374 364 571 2.38E-135 T 22-04-2016 VP2646 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF52374 1 192 2.38E-135 T 22-04-2016 VP2646 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF52374 609 641 2.38E-135 T 22-04-2016 VP2701 0979c95cd51cca7df89e5402dab2e662 574 Gene3D G3DSA:3.30.450.90 158 286 3.6E-46 T 22-04-2016 VP2701 0979c95cd51cca7df89e5402dab2e662 574 SUPERFAMILY SSF160246 3 145 4.18E-40 T 22-04-2016 VP2701 0979c95cd51cca7df89e5402dab2e662 574 PANTHER PTHR30258:SF11 1 571 0.0 T 22-04-2016 VP2701 0979c95cd51cca7df89e5402dab2e662 574 Pfam PF00437 Type II/IV secretion system protein 191 453 2.0E-74 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP2701 0979c95cd51cca7df89e5402dab2e662 574 SMART SM00382 314 435 5.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2701 0979c95cd51cca7df89e5402dab2e662 574 PANTHER PTHR30258 1 571 0.0 T 22-04-2016 VP2701 0979c95cd51cca7df89e5402dab2e662 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP2701 0979c95cd51cca7df89e5402dab2e662 574 SUPERFAMILY SSF52540 181 558 6.82E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2701 0979c95cd51cca7df89e5402dab2e662 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 9.9E-23 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VP2701 0979c95cd51cca7df89e5402dab2e662 574 Gene3D G3DSA:3.40.50.300 292 559 1.4E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2097 cf215906c9d81a11f69bebb424ad6308 297 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 290 6.6E-102 T 22-04-2016 IPR010119 Gluconeogenesis factor VP2097 cf215906c9d81a11f69bebb424ad6308 297 SUPERFAMILY SSF142338 6 291 2.22E-84 T 22-04-2016 VP2097 cf215906c9d81a11f69bebb424ad6308 297 Pfam PF01933 Uncharacterised protein family UPF0052 9 286 1.5E-76 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VP2097 cf215906c9d81a11f69bebb424ad6308 297 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.447 T 22-04-2016 IPR010119 Gluconeogenesis factor VP2097 cf215906c9d81a11f69bebb424ad6308 297 PANTHER PTHR30135:SF3 8 294 3.4E-108 T 22-04-2016 VP2097 cf215906c9d81a11f69bebb424ad6308 297 Gene3D G3DSA:3.40.50.10680 79 294 1.0E-55 T 22-04-2016 VP2097 cf215906c9d81a11f69bebb424ad6308 297 PANTHER PTHR30135 8 294 3.4E-108 T 22-04-2016 VP2463 c399095e96010e16f618de67f941c288 662 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 4.3E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP2463 c399095e96010e16f618de67f941c288 662 Gene3D G3DSA:3.40.50.300 148 335 2.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2463 c399095e96010e16f618de67f941c288 662 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VP2463 c399095e96010e16f618de67f941c288 662 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 634 37.392 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 VP2463 c399095e96010e16f618de67f941c288 662 PANTHER PTHR23076 3 623 0.0 T 22-04-2016 VP2463 c399095e96010e16f618de67f941c288 662 SUPERFAMILY SSF52540 147 395 9.77E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2463 c399095e96010e16f618de67f941c288 662 SUPERFAMILY SSF140990 406 600 3.14E-76 T 22-04-2016 VP2463 c399095e96010e16f618de67f941c288 662 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 5.6E-244 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 VP2463 c399095e96010e16f618de67f941c288 662 Pfam PF06480 FtsH Extracellular 8 97 9.9E-12 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 VP2463 c399095e96010e16f618de67f941c288 662 Pfam PF01434 Peptidase family M41 386 595 1.3E-82 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 VP2463 c399095e96010e16f618de67f941c288 662 SMART SM00382 188 327 5.1E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2463 c399095e96010e16f618de67f941c288 662 Gene3D G3DSA:1.10.8.60 336 409 4.4E-27 T 22-04-2016 VP0223 9308c3d033dcec1df0768306cf2d34ff 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 288 2.7E-150 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VP0223 9308c3d033dcec1df0768306cf2d34ff 291 Pfam PF00483 Nucleotidyl transferase 2 240 2.1E-72 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VP0223 9308c3d033dcec1df0768306cf2d34ff 291 SUPERFAMILY SSF53448 1 289 2.1E-91 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0223 9308c3d033dcec1df0768306cf2d34ff 291 PANTHER PTHR22572:SF105 2 289 4.9E-160 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VP0223 9308c3d033dcec1df0768306cf2d34ff 291 PANTHER PTHR22572 2 289 4.9E-160 T 22-04-2016 VP0223 9308c3d033dcec1df0768306cf2d34ff 291 Gene3D G3DSA:3.90.550.10 1 268 1.0E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0478 c3d01fecb3addb1c21edb094cb22e395 317 Pfam PF03186 CobD/Cbib protein 19 283 1.3E-32 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 VP0478 c3d01fecb3addb1c21edb094cb22e395 317 PANTHER PTHR34308:SF1 4 314 2.0E-65 T 22-04-2016 VP0478 c3d01fecb3addb1c21edb094cb22e395 317 PANTHER PTHR34308 4 314 2.0E-65 T 22-04-2016 VP1591 a4abe8bb68a25ec83a228c82b8560f7f 172 Gene3D G3DSA:3.10.129.10 2 168 7.3E-60 T 22-04-2016 IPR029069 HotDog domain VP1591 a4abe8bb68a25ec83a228c82b8560f7f 172 Pfam PF07977 FabA-like domain 29 158 3.0E-54 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VP1591 a4abe8bb68a25ec83a228c82b8560f7f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.377 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VP1591 a4abe8bb68a25ec83a228c82b8560f7f 172 SUPERFAMILY SSF54637 4 169 5.47E-57 T 22-04-2016 IPR029069 HotDog domain VP1591 a4abe8bb68a25ec83a228c82b8560f7f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 5.3E-92 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VP2991 6418e74eabd1921a114cb495efe2cc20 393 SUPERFAMILY SSF48452 245 294 4.49E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2991 6418e74eabd1921a114cb495efe2cc20 393 SUPERFAMILY SSF48452 85 215 4.49E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2991 6418e74eabd1921a114cb495efe2cc20 393 PANTHER PTHR23083:SF396 257 389 5.8E-81 T 22-04-2016 VP2991 6418e74eabd1921a114cb495efe2cc20 393 PANTHER PTHR23083:SF396 1 219 5.8E-81 T 22-04-2016 VP2991 6418e74eabd1921a114cb495efe2cc20 393 SMART SM00028 327 360 0.0011 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2991 6418e74eabd1921a114cb495efe2cc20 393 SUPERFAMILY SSF48452 268 389 1.71E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2991 6418e74eabd1921a114cb495efe2cc20 393 Gene3D G3DSA:1.25.40.10 85 203 4.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2991 6418e74eabd1921a114cb495efe2cc20 393 Pfam PF07219 HemY protein N-terminus 26 132 1.9E-27 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 VP2991 6418e74eabd1921a114cb495efe2cc20 393 PANTHER PTHR23083 257 389 5.8E-81 T 22-04-2016 VP2991 6418e74eabd1921a114cb495efe2cc20 393 PANTHER PTHR23083 1 219 5.8E-81 T 22-04-2016 VP2991 6418e74eabd1921a114cb495efe2cc20 393 Gene3D G3DSA:1.25.40.10 271 389 5.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2991 6418e74eabd1921a114cb495efe2cc20 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 2.3E-110 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 VP1926 0baaadd42145c80e8bff16b5d0006c4e 323 PANTHER PTHR34856 8 321 2.2E-93 T 22-04-2016 VP1926 0baaadd42145c80e8bff16b5d0006c4e 323 Gene3D G3DSA:1.20.1630.10 14 203 4.9E-9 T 22-04-2016 VP1926 0baaadd42145c80e8bff16b5d0006c4e 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 6.8E-147 T 22-04-2016 IPR017566 NrfD VP1926 0baaadd42145c80e8bff16b5d0006c4e 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 4.4E-77 T 22-04-2016 IPR005614 NrfD family VP1926 0baaadd42145c80e8bff16b5d0006c4e 323 PANTHER PTHR34856:SF2 8 321 2.2E-93 T 22-04-2016 VP0739 a415e3867f6b170de669f53bd90f2aa5 314 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.844 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VP0739 a415e3867f6b170de669f53bd90f2aa5 314 PANTHER PTHR10210:SF41 2 314 2.6E-187 T 22-04-2016 VP0739 a415e3867f6b170de669f53bd90f2aa5 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.9E-31 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VP0739 a415e3867f6b170de669f53bd90f2aa5 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.9E-125 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VP0739 a415e3867f6b170de669f53bd90f2aa5 314 SUPERFAMILY SSF53271 69 306 2.56E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP0739 a415e3867f6b170de669f53bd90f2aa5 314 Gene3D G3DSA:3.40.50.2020 2 159 1.7E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP0739 a415e3867f6b170de669f53bd90f2aa5 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.5E-50 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VP0739 a415e3867f6b170de669f53bd90f2aa5 314 PANTHER PTHR10210 2 314 2.6E-187 T 22-04-2016 VP0739 a415e3867f6b170de669f53bd90f2aa5 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 VP0739 a415e3867f6b170de669f53bd90f2aa5 314 Gene3D G3DSA:3.40.50.2020 160 286 1.8E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP0739 a415e3867f6b170de669f53bd90f2aa5 314 SMART SM01400 4 121 2.0E-77 T 22-04-2016 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.572 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 PIRSF PIRSF001430 1 254 5.2E-77 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 5.1E-73 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 PANTHER PTHR11142 1 259 6.2E-104 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 4.5E-29 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 Pfam PF01416 tRNA pseudouridine synthase 8 103 6.5E-11 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 SUPERFAMILY SSF55120 1 257 6.04E-94 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 Gene3D G3DSA:3.30.70.580 1 104 1.8E-38 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2190 d7a051d32065c47c98e6c9fc6391fdd9 264 Gene3D G3DSA:3.30.70.660 106 241 7.4E-45 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP0663 c90ca375a5c648158cca30a867c96a5e 161 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VP0663 c90ca375a5c648158cca30a867c96a5e 161 SUPERFAMILY SSF53927 1 146 4.22E-53 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VP0663 c90ca375a5c648158cca30a867c96a5e 161 PANTHER PTHR11079 1 144 5.3E-48 T 22-04-2016 VP0663 c90ca375a5c648158cca30a867c96a5e 161 PANTHER PTHR11079:SF72 1 144 5.3E-48 T 22-04-2016 VP0663 c90ca375a5c648158cca30a867c96a5e 161 Pfam PF14437 MafB19-like deaminase 1 142 2.3E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VP0663 c90ca375a5c648158cca30a867c96a5e 161 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 45.254 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VP0663 c90ca375a5c648158cca30a867c96a5e 161 Gene3D G3DSA:3.40.140.10 1 140 4.6E-56 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PANTHER PTHR22912:SF140 203 341 3.8E-22 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 Gene3D G3DSA:3.50.50.60 3 179 7.3E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0971 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.0E-12 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.0E-12 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.0E-12 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.0E-12 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PANTHER PTHR22912:SF140 2 187 3.8E-22 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 SUPERFAMILY SSF51905 3 103 4.58E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0971 930b3775cda48639fb20637e07c180ad 429 SUPERFAMILY SSF51905 220 347 4.58E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0971 930b3775cda48639fb20637e07c180ad 429 Gene3D G3DSA:3.50.50.60 180 348 6.7E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0971 930b3775cda48639fb20637e07c180ad 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 9.9E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0971 930b3775cda48639fb20637e07c180ad 429 PANTHER PTHR22912 2 187 3.8E-22 T 22-04-2016 VP0971 930b3775cda48639fb20637e07c180ad 429 PANTHER PTHR22912 203 341 3.8E-22 T 22-04-2016 VP2093 f16c2d637fa3f6c4a5a3e55be07b7c60 85 PANTHER PTHR33359 1 85 1.6E-21 T 22-04-2016 VP2093 f16c2d637fa3f6c4a5a3e55be07b7c60 85 Pfam PF02597 ThiS family 4 85 6.2E-22 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VP2093 f16c2d637fa3f6c4a5a3e55be07b7c60 85 SUPERFAMILY SSF54285 1 85 9.72E-19 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VP2093 f16c2d637fa3f6c4a5a3e55be07b7c60 85 Gene3D G3DSA:3.10.20.30 1 85 1.4E-23 T 22-04-2016 IPR012675 Beta-grasp domain VP2093 f16c2d637fa3f6c4a5a3e55be07b7c60 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 2.8E-20 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 VP1694 657c618e741f2a20b1fa444466dd11d6 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 3.5E-25 T 22-04-2016 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 VP1694 657c618e741f2a20b1fa444466dd11d6 82 SUPERFAMILY SSF140129 2 78 2.35E-23 T 22-04-2016 VP1694 657c618e741f2a20b1fa444466dd11d6 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 3.0E-22 T 22-04-2016 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 VP1381 8e923464f01943b00a810e5c4d6dec04 293 PIRSF PIRSF000371 1 293 1.6E-101 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VP1381 8e923464f01943b00a810e5c4d6dec04 293 Pfam PF13353 4Fe-4S single cluster domain 21 147 2.0E-7 T 22-04-2016 VP1381 8e923464f01943b00a810e5c4d6dec04 293 Gene3D G3DSA:3.80.30.10 118 279 2.2E-37 T 22-04-2016 VP1381 8e923464f01943b00a810e5c4d6dec04 293 Pfam PF04055 Radical SAM superfamily 29 225 6.3E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP1381 8e923464f01943b00a810e5c4d6dec04 293 PANTHER PTHR30352 98 278 1.6E-102 T 22-04-2016 VP1381 8e923464f01943b00a810e5c4d6dec04 293 PANTHER PTHR30352 12 64 1.6E-102 T 22-04-2016 VP1381 8e923464f01943b00a810e5c4d6dec04 293 Gene3D G3DSA:3.30.70.20 49 93 9.0E-10 T 22-04-2016 VP1381 8e923464f01943b00a810e5c4d6dec04 293 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1381 8e923464f01943b00a810e5c4d6dec04 293 SUPERFAMILY SSF102114 83 278 1.61E-10 T 22-04-2016 VP1381 8e923464f01943b00a810e5c4d6dec04 293 PANTHER PTHR30352:SF13 98 278 1.6E-102 T 22-04-2016 VP1381 8e923464f01943b00a810e5c4d6dec04 293 PANTHER PTHR30352:SF13 12 64 1.6E-102 T 22-04-2016 VP1381 8e923464f01943b00a810e5c4d6dec04 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 286 3.8E-125 T 22-04-2016 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VP1381 8e923464f01943b00a810e5c4d6dec04 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VP1381 8e923464f01943b00a810e5c4d6dec04 293 SUPERFAMILY SSF54862 28 146 7.71E-17 T 22-04-2016 VP0362 e1496d042816cef97af545a3fb0bac30 462 PANTHER PTHR24423 171 449 5.5E-90 T 22-04-2016 VP0362 e1496d042816cef97af545a3fb0bac30 462 SUPERFAMILY SSF55874 286 450 7.73E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0362 e1496d042816cef97af545a3fb0bac30 462 SMART SM00387 340 452 2.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0362 e1496d042816cef97af545a3fb0bac30 462 PANTHER PTHR24423:SF354 171 449 5.5E-90 T 22-04-2016 VP0362 e1496d042816cef97af545a3fb0bac30 462 SMART SM00304 177 230 2.0E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0362 e1496d042816cef97af545a3fb0bac30 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 296 1.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0362 e1496d042816cef97af545a3fb0bac30 462 Gene3D G3DSA:3.30.565.10 303 451 3.1E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0362 e1496d042816cef97af545a3fb0bac30 462 SMART SM00388 231 297 4.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0362 e1496d042816cef97af545a3fb0bac30 462 SUPERFAMILY SSF47384 215 296 4.32E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0362 e1496d042816cef97af545a3fb0bac30 462 Gene3D G3DSA:1.10.287.130 221 293 1.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0362 e1496d042816cef97af545a3fb0bac30 462 Pfam PF00672 HAMP domain 157 226 4.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0362 e1496d042816cef97af545a3fb0bac30 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 3.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0362 e1496d042816cef97af545a3fb0bac30 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 3.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0362 e1496d042816cef97af545a3fb0bac30 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 3.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0362 e1496d042816cef97af545a3fb0bac30 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 3.9E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0362 e1496d042816cef97af545a3fb0bac30 462 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 8 449 4.9E-118 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 VP0362 e1496d042816cef97af545a3fb0bac30 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 449 1.9E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2514 f57769e97919f1ac713def7bb3d4134d 222 SMART SM00947 30 192 1.3E-66 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VP2514 f57769e97919f1ac713def7bb3d4134d 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VP2514 f57769e97919f1ac713def7bb3d4134d 222 PANTHER PTHR11002:SF11 1 207 5.0E-138 T 22-04-2016 VP2514 f57769e97919f1ac713def7bb3d4134d 222 PANTHER PTHR11002 1 207 5.0E-138 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VP2514 f57769e97919f1ac713def7bb3d4134d 222 Gene3D G3DSA:3.40.1050.10 1 212 1.5E-79 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VP2514 f57769e97919f1ac713def7bb3d4134d 222 SUPERFAMILY SSF53056 2 212 1.83E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VP2514 f57769e97919f1ac713def7bb3d4134d 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VP2514 f57769e97919f1ac713def7bb3d4134d 222 Pfam PF00484 Carbonic anhydrase 38 188 9.3E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SMART SM00646 230 389 7.5E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SUPERFAMILY SSF54106 409 453 1.18E-9 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SUPERFAMILY SSF54106 472 516 1.44E-9 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Pfam PF11741 AMIN domain 34 135 8.1E-16 T 22-04-2016 IPR021731 AMIN domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 389 8.3E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Pfam PF01476 LysM domain 411 453 1.0E-11 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Pfam PF01476 LysM domain 527 569 6.8E-13 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Pfam PF01476 LysM domain 474 515 5.5E-11 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 PANTHER PTHR30404 1 422 2.0E-166 T 22-04-2016 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Gene3D G3DSA:3.10.350.10 526 570 6.3E-16 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 PANTHER PTHR30404:SF1 1 422 2.0E-166 T 22-04-2016 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SMART SM00257 410 453 3.6E-14 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SMART SM00257 473 516 7.4E-14 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SMART SM00257 526 569 1.5E-12 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SUPERFAMILY SSF54106 526 569 6.15E-10 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Gene3D G3DSA:3.40.630.40 167 265 1.2E-55 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Gene3D G3DSA:3.40.630.40 317 393 1.2E-55 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SUPERFAMILY SSF53187 316 392 3.01E-52 T 22-04-2016 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 SUPERFAMILY SSF53187 167 264 3.01E-52 T 22-04-2016 VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Gene3D G3DSA:3.10.350.10 408 454 2.7E-14 T 22-04-2016 IPR018392 LysM domain VP2820 b5e6889df755ebf3b8b51f980366c96d 571 Gene3D G3DSA:3.10.350.10 471 516 1.1E-14 T 22-04-2016 IPR018392 LysM domain VP0998 b9b4c696bda6d26d8f47d9cc28fd906f 256 PIRSF PIRSF039085 3 256 2.0E-116 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VP0998 b9b4c696bda6d26d8f47d9cc28fd906f 256 Gene3D G3DSA:3.40.50.300 6 253 3.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0998 b9b4c696bda6d26d8f47d9cc28fd906f 256 SUPERFAMILY SSF52540 7 251 2.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0998 b9b4c696bda6d26d8f47d9cc28fd906f 256 Pfam PF00005 ABC transporter 22 181 1.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0998 b9b4c696bda6d26d8f47d9cc28fd906f 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0998 b9b4c696bda6d26d8f47d9cc28fd906f 256 PANTHER PTHR24220:SF472 8 255 2.2E-160 T 22-04-2016 VP0998 b9b4c696bda6d26d8f47d9cc28fd906f 256 SMART SM00382 31 229 1.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0998 b9b4c696bda6d26d8f47d9cc28fd906f 256 PANTHER PTHR24220 8 255 2.2E-160 T 22-04-2016 VP0588 12fe0e25b22cb37c8b493023b4369d19 377 PANTHER PTHR21148:SF26 1 370 3.8E-188 T 22-04-2016 VP0588 12fe0e25b22cb37c8b493023b4369d19 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 370 1.1E-186 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0588 12fe0e25b22cb37c8b493023b4369d19 377 Gene3D G3DSA:3.20.20.105 2 368 2.7E-171 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0588 12fe0e25b22cb37c8b493023b4369d19 377 SUPERFAMILY SSF51713 3 366 3.66E-164 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0588 12fe0e25b22cb37c8b493023b4369d19 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 4.2E-178 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0588 12fe0e25b22cb37c8b493023b4369d19 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 361 58.126 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0588 12fe0e25b22cb37c8b493023b4369d19 377 PANTHER PTHR21148 1 370 3.8E-188 T 22-04-2016 VP0588 12fe0e25b22cb37c8b493023b4369d19 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 2.8E-97 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VP1643 bd0bb312a858d68dc99b1dacff530bff 160 PANTHER PTHR23091 1 146 7.1E-23 T 22-04-2016 VP1643 bd0bb312a858d68dc99b1dacff530bff 160 Gene3D G3DSA:3.40.630.30 5 146 7.4E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1643 bd0bb312a858d68dc99b1dacff530bff 160 SUPERFAMILY SSF55729 4 147 1.13E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1643 bd0bb312a858d68dc99b1dacff530bff 160 Pfam PF00583 Acetyltransferase (GNAT) family 63 146 4.7E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF46689 382 466 2.28E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 SMART SM00382 162 316 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:3.40.50.2300 3 126 9.9E-36 T 22-04-2016 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF52172 2 187 3.42E-43 T 22-04-2016 IPR011006 CheY-like superfamily VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:1.10.10.60 400 466 3.5E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:1.10.8.60 315 392 1.9E-22 T 22-04-2016 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 PANTHER PTHR32071:SF15 6 466 2.1E-240 T 22-04-2016 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 SMART SM00448 4 115 3.1E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF00072 Response regulator receiver domain 6 115 1.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 PANTHER PTHR32071 6 466 2.1E-240 T 22-04-2016 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 4.6E-238 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF52540 141 385 1.41E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.0E-71 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.6E-16 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0118 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:3.40.50.300 139 314 1.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0268 c79b300d389d473d91e755b7152d36e5 105 PANTHER PTHR12903 4 101 3.9E-47 T 22-04-2016 VP0268 c79b300d389d473d91e755b7152d36e5 105 Gene3D G3DSA:2.30.30.30 3 92 1.6E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VP0268 c79b300d389d473d91e755b7152d36e5 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 5.8E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0268 c79b300d389d473d91e755b7152d36e5 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0268 c79b300d389d473d91e755b7152d36e5 105 Pfam PF00467 KOW motif 8 37 8.0E-6 T 22-04-2016 IPR005824 KOW VP0268 c79b300d389d473d91e755b7152d36e5 105 SMART SM00739 4 31 3.4E-4 T 22-04-2016 IPR005824 KOW VP0268 c79b300d389d473d91e755b7152d36e5 105 SUPERFAMILY SSF50104 4 101 5.16E-34 T 22-04-2016 IPR008991 Translation protein SH3-like domain VP0268 c79b300d389d473d91e755b7152d36e5 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.041 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0268 c79b300d389d473d91e755b7152d36e5 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.7E-40 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2851 5ec6a845f2b865e8d525e47703260c67 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 3.0E-255 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VP2851 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF54849 137 203 1.19E-23 T 22-04-2016 VP2851 5ec6a845f2b865e8d525e47703260c67 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.644 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VP2851 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:3.50.7.10 200 369 2.0E-94 T 22-04-2016 IPR027409 GroEL-like apical domain VP2851 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:1.10.560.10 370 518 2.0E-39 T 22-04-2016 IPR027413 GroEL-like equatorial domain VP2851 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF52029 185 376 8.37E-84 T 22-04-2016 IPR027409 GroEL-like apical domain VP2851 5ec6a845f2b865e8d525e47703260c67 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.5E-97 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VP2851 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:1.10.560.10 3 199 6.1E-50 T 22-04-2016 IPR027413 GroEL-like equatorial domain VP2851 5ec6a845f2b865e8d525e47703260c67 547 PANTHER PTHR11353 2 547 4.5E-256 T 22-04-2016 VP2851 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF48592 406 521 3.89E-77 T 22-04-2016 VP2851 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF48592 7 134 3.89E-77 T 22-04-2016 VP2851 5ec6a845f2b865e8d525e47703260c67 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 VP2851 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VP2851 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VP2851 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VP2851 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VP2851 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VP1274 08a530a0f422fe5a87508db86e88b02a 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.362 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1274 08a530a0f422fe5a87508db86e88b02a 565 Gene3D G3DSA:3.40.1770.10 14 146 1.9E-163 T 22-04-2016 VP1274 08a530a0f422fe5a87508db86e88b02a 565 Gene3D G3DSA:3.40.1770.10 362 557 1.9E-163 T 22-04-2016 VP1274 08a530a0f422fe5a87508db86e88b02a 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 6.8E-292 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1274 08a530a0f422fe5a87508db86e88b02a 565 PIRSF PIRSF001423 1 563 6.8E-295 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1274 08a530a0f422fe5a87508db86e88b02a 565 Gene3D G3DSA:3.40.50.10730 147 351 3.1E-90 T 22-04-2016 VP1274 08a530a0f422fe5a87508db86e88b02a 565 SUPERFAMILY SSF111326 11 557 1.07E-259 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1274 08a530a0f422fe5a87508db86e88b02a 565 Pfam PF01175 Urocanase 17 549 1.0E-259 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1274 08a530a0f422fe5a87508db86e88b02a 565 PANTHER PTHR12216 10 557 0.0 T 22-04-2016 VP1274 08a530a0f422fe5a87508db86e88b02a 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1274 08a530a0f422fe5a87508db86e88b02a 565 PANTHER PTHR12216:SF3 10 557 0.0 T 22-04-2016 VPA1428 2fa59e51c434aa30b06ace5040fa5b71 150 PANTHER PTHR24362 10 145 3.5E-25 T 22-04-2016 VPA1428 2fa59e51c434aa30b06ace5040fa5b71 150 Gene3D G3DSA:1.10.510.10 60 143 5.0E-23 T 22-04-2016 VPA1428 2fa59e51c434aa30b06ace5040fa5b71 150 SMART SM00220 1 148 1.8E-4 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPA1428 2fa59e51c434aa30b06ace5040fa5b71 150 Pfam PF00069 Protein kinase domain 10 144 1.6E-25 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPA1428 2fa59e51c434aa30b06ace5040fa5b71 150 SUPERFAMILY SSF56112 13 145 3.64E-30 T 22-04-2016 IPR011009 Protein kinase-like domain VPA1428 2fa59e51c434aa30b06ace5040fa5b71 150 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 114 126 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VPA1428 2fa59e51c434aa30b06ace5040fa5b71 150 Gene3D G3DSA:3.30.200.20 12 59 8.3E-5 T 22-04-2016 VP1210 6973f3e1692c8e67a8442ae8e2cb5a76 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-38 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VP1210 6973f3e1692c8e67a8442ae8e2cb5a76 92 SUPERFAMILY SSF50715 1 92 4.19E-28 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VP1210 6973f3e1692c8e67a8442ae8e2cb5a76 92 Pfam PF01386 Ribosomal L25p family 4 89 3.8E-22 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VP1210 6973f3e1692c8e67a8442ae8e2cb5a76 92 Gene3D G3DSA:2.40.240.10 1 92 4.4E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VP1210 6973f3e1692c8e67a8442ae8e2cb5a76 92 PANTHER PTHR33284 1 92 5.1E-36 T 22-04-2016 VP1210 6973f3e1692c8e67a8442ae8e2cb5a76 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.525 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 Gene3D G3DSA:3.40.50.300 11 271 2.2E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 246 332 1.3E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 PANTHER PTHR24220:SF544 16 332 3.9E-193 T 22-04-2016 VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 SUPERFAMILY SSF52540 17 267 3.12E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 Pfam PF00005 ABC transporter 44 195 1.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 PANTHER PTHR24220 16 332 3.9E-193 T 22-04-2016 VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 314 9.4E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP2087 90d43dae35c41a03f63b248ebc3cfb32 336 SMART SM00382 52 245 1.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 PANTHER PTHR15184:SF34 54 141 4.9E-200 T 22-04-2016 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 PANTHER PTHR15184:SF34 160 418 4.9E-200 T 22-04-2016 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00357 52 118 1.7E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:3.40.50.300 132 418 5.7E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.3E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00382 170 355 6.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00959 5 47 6.9E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.0E-220 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 PANTHER PTHR15184 54 141 4.9E-200 T 22-04-2016 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 PANTHER PTHR15184 160 418 4.9E-200 T 22-04-2016 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.642 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:1.10.720.10 1 47 1.2E-21 T 22-04-2016 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:2.40.50.140 49 117 4.2E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.4E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF52540 90 371 2.93E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3000 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1345 d9a20d016aefecd4baa6db57a82a214c 310 Gene3D G3DSA:1.10.3720.10 103 307 1.1E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1345 d9a20d016aefecd4baa6db57a82a214c 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 308 1.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1345 d9a20d016aefecd4baa6db57a82a214c 310 PANTHER PTHR30465 20 310 1.7E-123 T 22-04-2016 VP1345 d9a20d016aefecd4baa6db57a82a214c 310 PANTHER PTHR30465:SF9 20 310 1.7E-123 T 22-04-2016 VP1345 d9a20d016aefecd4baa6db57a82a214c 310 SUPERFAMILY SSF161098 106 291 9.81E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1345 d9a20d016aefecd4baa6db57a82a214c 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 67 6.3E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VP1477 5fab167712abeaedf0496bc94e932d9d 280 PANTHER PTHR10459 15 277 4.6E-63 T 22-04-2016 VP1477 5fab167712abeaedf0496bc94e932d9d 280 Gene3D G3DSA:2.40.50.140 185 277 7.0E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1477 5fab167712abeaedf0496bc94e932d9d 280 Pfam PF14743 DNA ligase OB-like domain 212 277 1.0E-26 T 22-04-2016 IPR029319 DNA ligase, OB-like domain VP1477 5fab167712abeaedf0496bc94e932d9d 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 22-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 VP1477 5fab167712abeaedf0496bc94e932d9d 280 Gene3D G3DSA:3.30.470.30 18 151 3.9E-5 T 22-04-2016 VP1477 5fab167712abeaedf0496bc94e932d9d 280 Pfam PF01068 ATP dependent DNA ligase domain 45 198 8.1E-8 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 VP1477 5fab167712abeaedf0496bc94e932d9d 280 SUPERFAMILY SSF50249 173 277 1.77E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1477 5fab167712abeaedf0496bc94e932d9d 280 Gene3D G3DSA:3.30.1490.70 152 184 9.8E-7 T 22-04-2016 VP1477 5fab167712abeaedf0496bc94e932d9d 280 SUPERFAMILY SSF56091 22 198 6.72E-42 T 22-04-2016 VP1477 5fab167712abeaedf0496bc94e932d9d 280 PANTHER PTHR10459:SF61 15 277 4.6E-63 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1375 10.461 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 SMART SM00663 235 514 1.1E-184 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.4E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 SUPERFAMILY SSF64484 1133 1363 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.40.20 417 489 2.5E-37 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.40.20 349 376 2.5E-37 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.327 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 961 1157 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 961 1157 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 3.5E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.3E-19 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 1302 1379 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 1176 1261 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.50.100 1156 1209 7.0E-8 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 1302 1379 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 1176 1261 0.0 T 22-04-2016 VP2921 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.6E-87 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2413 3164a1ec6704fb1095cc22e4da467c90 402 Gene3D G3DSA:3.40.50.300 146 385 1.6E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2413 3164a1ec6704fb1095cc22e4da467c90 402 Pfam PF13614 AAA domain 153 307 1.2E-10 T 22-04-2016 IPR025669 AAA domain VP2413 3164a1ec6704fb1095cc22e4da467c90 402 PANTHER PTHR13696 153 398 1.8E-25 T 22-04-2016 VP2413 3164a1ec6704fb1095cc22e4da467c90 402 SUPERFAMILY SSF52540 152 384 2.41E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2413 3164a1ec6704fb1095cc22e4da467c90 402 Gene3D G3DSA:3.40.50.2300 92 141 8.7E-4 T 22-04-2016 VP2449 9bf64bf3d43e4ca2460cd31470380c70 448 PANTHER PTHR11206:SF132 1 438 2.4E-123 T 22-04-2016 VP2449 9bf64bf3d43e4ca2460cd31470380c70 448 PIRSF PIRSF006603 1 438 1.2E-67 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2449 9bf64bf3d43e4ca2460cd31470380c70 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 8.8E-49 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2449 9bf64bf3d43e4ca2460cd31470380c70 448 PANTHER PTHR11206 1 438 2.4E-123 T 22-04-2016 VP2449 9bf64bf3d43e4ca2460cd31470380c70 448 Pfam PF01554 MatE 240 398 6.0E-15 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2449 9bf64bf3d43e4ca2460cd31470380c70 448 Pfam PF01554 MatE 15 176 5.9E-22 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP0605 9121866415ae1303a2663952ef1a485d 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 1.3E-160 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0605 9121866415ae1303a2663952ef1a485d 375 PIRSF PIRSF006004 3 366 1.8E-144 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0605 9121866415ae1303a2663952ef1a485d 375 PANTHER PTHR30544 1 375 1.4E-192 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0605 9121866415ae1303a2663952ef1a485d 375 SUPERFAMILY SSF102114 103 312 1.31E-12 T 22-04-2016 VP0605 9121866415ae1303a2663952ef1a485d 375 Gene3D G3DSA:3.20.20.70 106 329 3.2E-15 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0605 9121866415ae1303a2663952ef1a485d 375 PANTHER PTHR30544:SF5 1 375 1.4E-192 T 22-04-2016 VP0605 9121866415ae1303a2663952ef1a485d 375 Pfam PF04055 Radical SAM superfamily 109 278 4.2E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP0605 9121866415ae1303a2663952ef1a485d 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.631 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP2813 ee9568479a083c373f404a27701cb661 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 9.1E-24 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 VP2813 ee9568479a083c373f404a27701cb661 61 PANTHER PTHR38602:SF1 1 61 5.2E-20 T 22-04-2016 VP2813 ee9568479a083c373f404a27701cb661 61 PANTHER PTHR38602 1 61 5.2E-20 T 22-04-2016 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 2 78 1.8E-32 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.0E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 PANTHER PTHR10031 8 77 1.8E-20 T 22-04-2016 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.624 T 22-04-2016 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VP3074 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VP2915 65a4862e1f4b66039fa3c46f72f465cd 190 SMART SM00986 27 183 3.9E-31 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VP2915 65a4862e1f4b66039fa3c46f72f465cd 190 PANTHER PTHR42160:SF1 1 190 5.3E-91 T 22-04-2016 VP2915 65a4862e1f4b66039fa3c46f72f465cd 190 SMART SM00987 27 183 3.9E-31 T 22-04-2016 VP2915 65a4862e1f4b66039fa3c46f72f465cd 190 SUPERFAMILY SSF52141 2 189 1.6E-58 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VP2915 65a4862e1f4b66039fa3c46f72f465cd 190 Gene3D G3DSA:3.40.470.10 2 189 1.7E-47 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VP2915 65a4862e1f4b66039fa3c46f72f465cd 190 PANTHER PTHR42160 1 190 5.3E-91 T 22-04-2016 VP2915 65a4862e1f4b66039fa3c46f72f465cd 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 1.9E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VP1900 de2263b6a24c8d8220901de87e9e7012 396 PANTHER PTHR11879 1 395 4.0E-263 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VP1900 de2263b6a24c8d8220901de87e9e7012 396 Pfam PF00155 Aminotransferase class I and II 27 391 1.1E-82 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VP1900 de2263b6a24c8d8220901de87e9e7012 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.62E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VP1900 de2263b6a24c8d8220901de87e9e7012 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.62E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VP1900 de2263b6a24c8d8220901de87e9e7012 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.62E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VP1900 de2263b6a24c8d8220901de87e9e7012 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.62E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VP1900 de2263b6a24c8d8220901de87e9e7012 396 Gene3D G3DSA:3.40.640.10 45 315 3.1E-106 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1900 de2263b6a24c8d8220901de87e9e7012 396 SUPERFAMILY SSF53383 1 395 1.65E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1900 de2263b6a24c8d8220901de87e9e7012 396 PANTHER PTHR11879:SF11 1 395 4.0E-263 T 22-04-2016 VP1900 de2263b6a24c8d8220901de87e9e7012 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM01086 319 414 2.4E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP0918 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:1.10.8.60 318 418 6.9E-38 T 22-04-2016 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 PANTHER PTHR11262 11 415 5.8E-252 T 22-04-2016 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.324 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:3.40.50.300 296 312 6.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0918 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:3.40.50.300 66 255 6.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0918 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM00382 113 266 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0918 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 7.0E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP0918 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.1E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM00994 13 52 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 2.2E-209 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 22-04-2016 VP0918 3308a9ef8492d5667d1c583302c6be8d 426 SUPERFAMILY SSF52540 63 404 5.02E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0911 7afaadd5256949ba5c223dc9dbaab7c5 224 PANTHER PTHR35011 1 129 8.9E-77 T 22-04-2016 VP0911 7afaadd5256949ba5c223dc9dbaab7c5 224 PANTHER PTHR35011 152 202 8.9E-77 T 22-04-2016 VP0911 7afaadd5256949ba5c223dc9dbaab7c5 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 8.8E-27 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VP0911 7afaadd5256949ba5c223dc9dbaab7c5 224 PANTHER PTHR35011:SF1 1 129 8.9E-77 T 22-04-2016 VP0911 7afaadd5256949ba5c223dc9dbaab7c5 224 PANTHER PTHR35011:SF1 152 202 8.9E-77 T 22-04-2016 VP2300 b18b099211f86e4ae351a4cd4379c5f9 103 PRINTS PR00605 Class IC cytochrome C signature 32 43 8.5E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VP2300 b18b099211f86e4ae351a4cd4379c5f9 103 PRINTS PR00605 Class IC cytochrome C signature 77 99 8.5E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VP2300 b18b099211f86e4ae351a4cd4379c5f9 103 SUPERFAMILY SSF46626 11 102 3.15E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2300 b18b099211f86e4ae351a4cd4379c5f9 103 PANTHER PTHR33751 3 103 5.2E-27 T 22-04-2016 VP2300 b18b099211f86e4ae351a4cd4379c5f9 103 Pfam PF00034 Cytochrome c 27 103 2.8E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2300 b18b099211f86e4ae351a4cd4379c5f9 103 Gene3D G3DSA:1.10.760.10 12 103 3.3E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1682 2bc4cb163a52adb9536ff905dedbe274 152 Pfam PF05932 Tir chaperone protein (CesT) family 7 126 6.3E-27 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VP1682 2bc4cb163a52adb9536ff905dedbe274 152 Gene3D G3DSA:3.30.1460.10 1 130 7.9E-10 T 22-04-2016 VP1682 2bc4cb163a52adb9536ff905dedbe274 152 SUPERFAMILY SSF69635 1 147 9.03E-36 T 22-04-2016 VPA1161 910c8bcb257005b757b39dcada51eecf 145 PANTHER PTHR30465:SF65 67 145 3.9E-62 T 22-04-2016 VPA1161 910c8bcb257005b757b39dcada51eecf 145 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 1 144 1.8E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPA1161 910c8bcb257005b757b39dcada51eecf 145 PANTHER PTHR30465 67 145 3.9E-62 T 22-04-2016 VPA1161 910c8bcb257005b757b39dcada51eecf 145 PANTHER PTHR30465 1 42 3.9E-62 T 22-04-2016 VPA1161 910c8bcb257005b757b39dcada51eecf 145 Gene3D G3DSA:1.10.3720.10 3 36 6.2E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPA1161 910c8bcb257005b757b39dcada51eecf 145 Gene3D G3DSA:1.10.3720.10 76 143 6.2E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPA1161 910c8bcb257005b757b39dcada51eecf 145 SUPERFAMILY SSF161098 73 143 5.01E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPA1161 910c8bcb257005b757b39dcada51eecf 145 SUPERFAMILY SSF161098 1 33 5.01E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPA1161 910c8bcb257005b757b39dcada51eecf 145 PANTHER PTHR30465:SF65 1 42 3.9E-62 T 22-04-2016 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.4E-24 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 Gene3D G3DSA:1.10.10.10 5 55 9.4E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 SMART SM00420 6 58 1.2E-27 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 PANTHER PTHR30363 1 261 1.1E-113 T 22-04-2016 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 SMART SM01134 72 234 8.8E-68 T 22-04-2016 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 PANTHER PTHR30363:SF1 1 261 1.1E-113 T 22-04-2016 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 SUPERFAMILY SSF46785 5 77 4.94E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 SUPERFAMILY SSF100950 74 234 5.39E-29 T 22-04-2016 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.7E-50 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VP2387 e85b8ae1a431f3285a019ffd56555e6a 263 Gene3D G3DSA:3.30.750.70 77 154 5.0E-14 T 22-04-2016 VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 Pfam PF05036 Sporulation related domain 190 260 4.7E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 PANTHER PTHR34183:SF1 29 244 2.7E-85 T 22-04-2016 VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 SUPERFAMILY SSF50685 88 175 2.86E-11 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 SUPERFAMILY SSF110997 189 262 2.75E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 Pfam PF03330 Lytic transglycolase 84 173 2.5E-28 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 PANTHER PTHR34183 29 244 2.7E-85 T 22-04-2016 VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 250 2.1E-47 T 22-04-2016 IPR012997 Rare lipoprotein A VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 Gene3D G3DSA:3.30.70.1070 189 261 5.0E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP0720 129d9b233eeb24ea4f3f4bee68d225d1 267 Gene3D G3DSA:2.40.40.10 123 175 1.3E-6 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VP2984 84fe130918c3d1dd704565d2b17c20eb 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 283 4.9E-72 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 5.8E-168 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 Gene3D G3DSA:2.40.37.10 269 415 1.0E-48 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 SUPERFAMILY SSF50621 261 414 2.93E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 SUPERFAMILY SSF51419 27 284 9.74E-83 T 22-04-2016 IPR029066 PLP-binding barrel VP2984 84fe130918c3d1dd704565d2b17c20eb 417 Gene3D G3DSA:3.20.20.10 37 268 1.8E-82 T 22-04-2016 IPR029066 PLP-binding barrel VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PANTHER PTHR11482:SF5 3 416 8.6E-185 T 22-04-2016 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PANTHER PTHR11482 3 416 8.6E-185 T 22-04-2016 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.423 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 288 390 1.3E-17 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.4E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.4E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.4E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2984 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.4E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 Pfam PF00462 Glutaredoxin 173 231 4.2E-18 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 Gene3D G3DSA:3.40.30.10 4 163 3.4E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 SUPERFAMILY SSF52833 3 241 3.3E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 PANTHER PTHR10430 1 168 1.4E-105 T 22-04-2016 VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 PANTHER PTHR10430:SF19 1 168 1.4E-105 T 22-04-2016 VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 2.1E-42 T 22-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 Pfam PF08534 Redoxin 5 160 3.1E-33 T 22-04-2016 IPR013740 Redoxin GO:0016491 VP2753 1f6663a37b9e70e05932e1a1755c4bd8 242 Gene3D G3DSA:3.40.30.10 170 241 2.2E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1701 e408a3aa4172f34f3031b805b774ab8e 148 Gene3D G3DSA:3.30.1460.10 4 129 1.5E-9 T 22-04-2016 VP1701 e408a3aa4172f34f3031b805b774ab8e 148 Pfam PF05932 Tir chaperone protein (CesT) family 10 124 3.0E-14 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VP1701 e408a3aa4172f34f3031b805b774ab8e 148 SUPERFAMILY SSF69635 4 136 9.03E-26 T 22-04-2016 VP2441 f31ddc6d91c17eecbf523529b6da5f16 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 1.5E-36 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 VP2441 f31ddc6d91c17eecbf523529b6da5f16 151 PANTHER PTHR23091:SF247 1 145 2.2E-30 T 22-04-2016 VP2441 f31ddc6d91c17eecbf523529b6da5f16 151 Pfam PF00583 Acetyltransferase (GNAT) family 47 121 7.7E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2441 f31ddc6d91c17eecbf523529b6da5f16 151 SUPERFAMILY SSF55729 1 147 1.01E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2441 f31ddc6d91c17eecbf523529b6da5f16 151 PANTHER PTHR23091 1 145 2.2E-30 T 22-04-2016 VP2441 f31ddc6d91c17eecbf523529b6da5f16 151 Gene3D G3DSA:3.40.630.30 1 146 4.3E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 SUPERFAMILY SSF63418 11 105 2.22E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 PANTHER PTHR23135 12 489 1.1E-189 T 22-04-2016 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 Gene3D G3DSA:3.90.190.20 341 483 1.0E-53 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 SUPERFAMILY SSF53244 338 489 6.26E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 489 6.3E-169 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 Pfam PF01225 Mur ligase family, catalytic domain 26 102 3.5E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 SUPERFAMILY SSF53623 109 336 1.57E-72 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 PANTHER PTHR23135:SF4 12 489 1.1E-189 T 22-04-2016 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 Pfam PF08245 Mur ligase middle domain 115 316 2.8E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 Gene3D G3DSA:3.40.1390.10 18 106 6.8E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.741 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 420 1.7E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0455 c89186e2ce4eb3d1fccf8dee5effe069 493 Gene3D G3DSA:3.40.1190.10 109 340 5.9E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0941 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82866 794 1009 3.01E-49 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 4.7E-277 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:1.20.1640.10 286 499 1.0E-56 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0941 b873cdd5c6e5674871565e442682f09c 1037 PANTHER PTHR32063:SF29 1 1008 0.0 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:3.30.2090.10 703 788 1.5E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP0941 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82693 40 134 7.06E-25 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:3.30.2090.10 183 268 5.1E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP0941 b873cdd5c6e5674871565e442682f09c 1037 PANTHER PTHR32063 1 1008 0.0 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82866 290 488 8.76E-45 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82693 139 181 9.16E-18 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82693 268 324 9.16E-18 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:3.30.70.1430 40 140 3.5E-29 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82714 183 266 3.14E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP0941 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82693 554 657 2.88E-17 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82714 704 788 2.22E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP0941 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:1.10.3850.10 796 1008 3.3E-63 T 22-04-2016 VP0941 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:3.30.70.1430 556 653 2.7E-15 T 22-04-2016 VP2210 00714bac76df102ea4b05d91c85566ae 191 SUPERFAMILY SSF88946 27 109 5.49E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2210 00714bac76df102ea4b05d91c85566ae 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2210 00714bac76df102ea4b05d91c85566ae 191 Pfam PF04542 Sigma-70 region 2 33 99 2.2E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2210 00714bac76df102ea4b05d91c85566ae 191 PANTHER PTHR30173 5 182 6.9E-52 T 22-04-2016 VP2210 00714bac76df102ea4b05d91c85566ae 191 PANTHER PTHR30173:SF6 5 182 6.9E-52 T 22-04-2016 VP2210 00714bac76df102ea4b05d91c85566ae 191 SUPERFAMILY SSF88659 120 180 2.62E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2210 00714bac76df102ea4b05d91c85566ae 191 Pfam PF08281 Sigma-70, region 4 123 175 1.1E-9 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2210 00714bac76df102ea4b05d91c85566ae 191 Gene3D G3DSA:1.10.10.10 122 180 7.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2210 00714bac76df102ea4b05d91c85566ae 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 2.1E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2210 00714bac76df102ea4b05d91c85566ae 191 Gene3D G3DSA:1.10.1740.10 26 121 5.8E-23 T 22-04-2016 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 SUPERFAMILY SSF68923 11 228 2.62E-88 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.40.449.10 24 227 4.8E-87 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 SUPERFAMILY SSF53795 230 541 1.96E-128 T 22-04-2016 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.90.228.20 352 540 6.4E-121 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.90.228.20 229 291 6.4E-121 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-278 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 PANTHER PTHR30031:SF0 5 542 0.0 T 22-04-2016 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 PANTHER PTHR30031 5 542 0.0 T 22-04-2016 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 18 539 55.124 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 3.1E-211 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VP0129 b3035c1dd8d90a33ff051778a2360f95 542 PIRSF PIRSF006294 4 541 1.5E-227 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VP2774 3e7e8813761cc7cf1414e7c81e8bfe55 91 SUPERFAMILY SSF75169 1 90 8.83E-24 T 22-04-2016 IPR027396 DsrEFH-like VP2774 3e7e8813761cc7cf1414e7c81e8bfe55 91 Gene3D G3DSA:3.40.1260.10 1 88 3.3E-22 T 22-04-2016 IPR027396 DsrEFH-like VP2774 3e7e8813761cc7cf1414e7c81e8bfe55 91 Pfam PF04077 DsrH like protein 10 86 1.4E-23 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VP2774 3e7e8813761cc7cf1414e7c81e8bfe55 91 PANTHER PTHR37526 1 90 3.2E-19 T 22-04-2016 VP2774 3e7e8813761cc7cf1414e7c81e8bfe55 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 2.5E-27 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VP0672 796647f71fcc01e5bc627e38421a3e03 429 PANTHER PTHR11119 1 418 1.0E-174 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP0672 796647f71fcc01e5bc627e38421a3e03 429 PIRSF PIRSF005353 1 429 1.9E-188 T 22-04-2016 IPR026033 Purine permease PbuG-like VP0672 796647f71fcc01e5bc627e38421a3e03 429 Pfam PF00860 Permease family 17 391 2.0E-56 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP0672 796647f71fcc01e5bc627e38421a3e03 429 PANTHER PTHR11119:SF9 1 418 1.0E-174 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 VP1795 6bc4f3f509bcfa2df953673980ca0d4e 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 5.3E-16 T 22-04-2016 IPR021681 Protein of unknown function DUF3265 VP0346 da5d330f11385d92ab21faccdc56e765 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VP0346 da5d330f11385d92ab21faccdc56e765 515 PANTHER PTHR10277 1 507 2.7E-249 T 22-04-2016 VP0346 da5d330f11385d92ab21faccdc56e765 515 SUPERFAMILY SSF51569 1 291 1.61E-100 T 22-04-2016 VP0346 da5d330f11385d92ab21faccdc56e765 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.4E-29 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VP0346 da5d330f11385d92ab21faccdc56e765 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 2.4E-237 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VP0346 da5d330f11385d92ab21faccdc56e765 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VP0346 da5d330f11385d92ab21faccdc56e765 515 SUPERFAMILY SSF110921 393 498 3.01E-20 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VP0346 da5d330f11385d92ab21faccdc56e765 515 SMART SM00917 369 499 2.0E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VP0346 da5d330f11385d92ab21faccdc56e765 515 PANTHER PTHR10277:SF9 1 507 2.7E-249 T 22-04-2016 VP0346 da5d330f11385d92ab21faccdc56e765 515 Gene3D G3DSA:3.20.20.70 1 347 3.2E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0346 da5d330f11385d92ab21faccdc56e765 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.333 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VP0346 da5d330f11385d92ab21faccdc56e765 515 Pfam PF00682 HMGL-like 4 273 1.3E-100 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VP2487 a7e51a994758f5a23478d63586a16c6e 802 PANTHER PTHR37469 419 802 0.0 T 22-04-2016 VP2487 a7e51a994758f5a23478d63586a16c6e 802 PANTHER PTHR37469 1 393 0.0 T 22-04-2016 VP2487 a7e51a994758f5a23478d63586a16c6e 802 Gene3D G3DSA:2.70.98.40 1 325 1.8E-101 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 VP2487 a7e51a994758f5a23478d63586a16c6e 802 PANTHER PTHR37469:SF1 419 802 0.0 T 22-04-2016 VP2487 a7e51a994758f5a23478d63586a16c6e 802 PANTHER PTHR37469:SF1 1 393 0.0 T 22-04-2016 VP2487 a7e51a994758f5a23478d63586a16c6e 802 Pfam PF06165 Glycosyltransferase family 36 21 267 3.0E-84 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 VP2487 a7e51a994758f5a23478d63586a16c6e 802 SUPERFAMILY SSF48208 274 801 3.74E-110 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VP2487 a7e51a994758f5a23478d63586a16c6e 802 SUPERFAMILY SSF74650 1 269 2.01E-82 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VP2487 a7e51a994758f5a23478d63586a16c6e 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 6.8E-210 T 22-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain VP2487 a7e51a994758f5a23478d63586a16c6e 802 Gene3D G3DSA:1.50.10.10 508 674 6.6E-8 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VP2487 a7e51a994758f5a23478d63586a16c6e 802 SMART SM01068 1 63 2.3E-20 T 22-04-2016 IPR009342 Putative carbohydrate binding domain VP2487 a7e51a994758f5a23478d63586a16c6e 802 Gene3D G3DSA:2.60.420.10 720 782 5.4E-9 T 22-04-2016 VPA0326 b405930d6240cd2b4988aa82f321e6cc 64 PANTHER PTHR11540 1 64 1.5E-42 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VPA0326 b405930d6240cd2b4988aa82f321e6cc 64 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 52 2.2E-11 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VPA0326 b405930d6240cd2b4988aa82f321e6cc 64 SUPERFAMILY SSF51735 1 52 1.36E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain VPA0326 b405930d6240cd2b4988aa82f321e6cc 64 Gene3D G3DSA:3.40.50.720 1 52 7.5E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain VPA0326 b405930d6240cd2b4988aa82f321e6cc 64 PANTHER PTHR11540:SF22 1 64 1.5E-42 T 22-04-2016 VP0289 254da2397c60a82b865dd39f5bf7a671 190 PANTHER PTHR24567 15 185 6.2E-19 T 22-04-2016 VP0289 254da2397c60a82b865dd39f5bf7a671 190 SUPERFAMILY SSF51206 15 132 1.83E-21 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP0289 254da2397c60a82b865dd39f5bf7a671 190 PANTHER PTHR24567:SF33 15 185 6.2E-19 T 22-04-2016 VP0289 254da2397c60a82b865dd39f5bf7a671 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 9.0E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP0289 254da2397c60a82b865dd39f5bf7a671 190 Gene3D G3DSA:2.60.120.10 12 152 1.3E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1983 56b9dda81d95a49755e063cab8314e42 225 SUPERFAMILY SSF46894 123 222 9.07E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP1983 56b9dda81d95a49755e063cab8314e42 225 Gene3D G3DSA:3.40.50.2300 2 121 1.9E-38 T 22-04-2016 VP1983 56b9dda81d95a49755e063cab8314e42 225 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1983 56b9dda81d95a49755e063cab8314e42 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 3.1E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP1983 56b9dda81d95a49755e063cab8314e42 225 SMART SM00862 147 221 3.2E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP1983 56b9dda81d95a49755e063cab8314e42 225 SUPERFAMILY SSF52172 1 125 7.26E-39 T 22-04-2016 IPR011006 CheY-like superfamily VP1983 56b9dda81d95a49755e063cab8314e42 225 SMART SM00448 2 113 4.8E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1983 56b9dda81d95a49755e063cab8314e42 225 PANTHER PTHR26402 2 223 1.3E-67 T 22-04-2016 VP1983 56b9dda81d95a49755e063cab8314e42 225 Gene3D G3DSA:1.10.10.10 126 222 3.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1983 56b9dda81d95a49755e063cab8314e42 225 PANTHER PTHR26402:SF552 2 223 1.3E-67 T 22-04-2016 VP2538 31be1eb081bff888617fb21bbac86635 203 Gene3D G3DSA:1.10.530.10 50 164 1.7E-7 T 22-04-2016 VP2538 31be1eb081bff888617fb21bbac86635 203 SUPERFAMILY SSF53955 16 168 3.56E-22 T 22-04-2016 IPR023346 Lysozyme-like domain VP2883 d61f8146435788019fab47b3bffc1325 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 4.0E-109 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VP2883 d61f8146435788019fab47b3bffc1325 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 6.3E-106 T 22-04-2016 VP2883 d61f8146435788019fab47b3bffc1325 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 34.054 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VP2883 d61f8146435788019fab47b3bffc1325 295 PIRSF PIRSF000401 1 295 3.8E-101 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VP2883 d61f8146435788019fab47b3bffc1325 295 PANTHER PTHR18895:SF69 12 291 1.7E-157 T 22-04-2016 VP2883 d61f8146435788019fab47b3bffc1325 295 SUPERFAMILY SSF53335 43 274 2.22E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2883 d61f8146435788019fab47b3bffc1325 295 Gene3D G3DSA:3.40.50.150 99 287 2.6E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2883 d61f8146435788019fab47b3bffc1325 295 PANTHER PTHR18895 12 291 1.7E-157 T 22-04-2016 VP0446 1fcca5d97770c3edbd44502bf414861d 233 PANTHER PTHR34606:SF4 1 185 2.5E-72 T 22-04-2016 VP0446 1fcca5d97770c3edbd44502bf414861d 233 Pfam PF04972 BON domain 44 110 4.7E-13 T 22-04-2016 IPR007055 BON domain VP0446 1fcca5d97770c3edbd44502bf414861d 233 Pfam PF04972 BON domain 120 185 2.3E-16 T 22-04-2016 IPR007055 BON domain VP0446 1fcca5d97770c3edbd44502bf414861d 233 SMART SM00749 125 188 0.0033 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VP0446 1fcca5d97770c3edbd44502bf414861d 233 SMART SM00749 48 111 33.0 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VP0446 1fcca5d97770c3edbd44502bf414861d 233 PANTHER PTHR34606 1 185 2.5E-72 T 22-04-2016 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 Gene3D G3DSA:3.40.1670.10 479 583 2.9E-32 T 22-04-2016 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 Gene3D G3DSA:3.40.1670.10 337 453 3.5E-51 T 22-04-2016 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 475 567 1.5E-20 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.0E-161 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 2.2E-165 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 SUPERFAMILY SSF143968 323 461 3.79E-53 T 22-04-2016 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 SUPERFAMILY SSF50475 3 322 2.75E-122 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 PANTHER PTHR30108:SF1 1 478 1.6E-246 T 22-04-2016 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 SUPERFAMILY SSF143968 473 615 1.83E-36 T 22-04-2016 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 Gene3D G3DSA:1.20.5.570 584 617 9.3E-18 T 22-04-2016 VP2997 2b9de6b989ad9b7a5a26bf34a540f732 617 PANTHER PTHR30108 1 478 1.6E-246 T 22-04-2016 VP0841 ec9ed85079f81b43c552ba143f0228e1 252 SUPERFAMILY SSF102705 1 251 4.19E-82 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VP0841 ec9ed85079f81b43c552ba143f0228e1 252 Gene3D G3DSA:3.40.1390.30 1 107 1.0E-36 T 22-04-2016 VP0841 ec9ed85079f81b43c552ba143f0228e1 252 PANTHER PTHR13799 1 248 1.1E-76 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VP0841 ec9ed85079f81b43c552ba143f0228e1 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 1.9E-68 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VP0841 ec9ed85079f81b43c552ba143f0228e1 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 1.1E-57 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VP0841 ec9ed85079f81b43c552ba143f0228e1 252 Gene3D G3DSA:3.40.1390.30 108 219 5.0E-28 T 22-04-2016 VP1189 13b48926934a9d0b6d126c3e91b82215 553 PANTHER PTHR30109:SF0 1 551 8.3E-282 T 22-04-2016 VP1189 13b48926934a9d0b6d126c3e91b82215 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 7.3E-164 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 Gene3D G3DSA:1.20.1270.20 162 235 1.4E-24 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 Gene3D G3DSA:3.40.50.2030 237 382 6.5E-68 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 Gene3D G3DSA:3.40.50.2030 383 550 3.2E-70 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.243 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 PIRSF PIRSF000076 1 553 2.3E-245 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 Gene3D G3DSA:1.20.1270.20 141 161 3.6E-35 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 Gene3D G3DSA:1.20.1270.20 1 109 3.6E-35 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 PANTHER PTHR30109 1 551 8.3E-282 T 22-04-2016 VP1189 13b48926934a9d0b6d126c3e91b82215 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.8E-226 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VP1189 13b48926934a9d0b6d126c3e91b82215 553 SUPERFAMILY SSF56821 1 551 6.67E-196 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 3.8E-62 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 PANTHER PTHR12128:SF15 1 290 5.2E-85 T 22-04-2016 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 SUPERFAMILY SSF51569 3 291 3.14E-86 T 22-04-2016 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 Gene3D G3DSA:3.20.20.70 2 292 4.6E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 PANTHER PTHR12128 1 290 5.2E-85 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 PIRSF PIRSF001365 1 301 1.2E-85 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.8E-10 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.8E-10 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.8E-10 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP1335 296b886a7f650b0998aa1d3e944d84c4 304 SMART SM01130 4 293 9.6E-98 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 Gene3D G3DSA:3.40.50.1770 204 357 2.8E-30 T 22-04-2016 VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 SMART SM01002 149 297 2.5E-88 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 4.1E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 SMART SM01003 4 137 2.6E-79 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 Gene3D G3DSA:3.50.50.60 179 203 4.6E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 PIRSF PIRSF000183 1 371 1.3E-157 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 PANTHER PTHR10160 1 371 8.1E-214 T 22-04-2016 VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 SUPERFAMILY SSF51735 137 303 1.74E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.3E-46 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 Gene3D G3DSA:3.40.50.1770 3 178 1.7E-62 T 22-04-2016 VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 2.2E-155 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 SUPERFAMILY SSF52283 305 360 3.15E-67 T 22-04-2016 VP1103 c4f8d5c7c102f47b0c46e3ece14c580c 374 SUPERFAMILY SSF52283 1 137 3.15E-67 T 22-04-2016 VP1708 4a2435c240935a82824c3fec22bd662b 482 Gene3D G3DSA:3.40.50.720 2 180 6.6E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1708 4a2435c240935a82824c3fec22bd662b 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 SMART SM01350 179 469 1.5E-214 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 1.5E-124 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 5.4E-51 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 VP1708 4a2435c240935a82824c3fec22bd662b 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 2.6E-234 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 PANTHER PTHR11811 1 482 1.3E-298 T 22-04-2016 VP1708 4a2435c240935a82824c3fec22bd662b 482 SUPERFAMILY SSF51735 4 174 6.37E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1708 4a2435c240935a82824c3fec22bd662b 482 SUPERFAMILY SSF48179 177 472 2.11E-126 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP1708 4a2435c240935a82824c3fec22bd662b 482 Gene3D G3DSA:1.10.1040.10 181 433 4.9E-113 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP1708 4a2435c240935a82824c3fec22bd662b 482 PIRSF PIRSF000109 1 477 1.1E-241 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP1708 4a2435c240935a82824c3fec22bd662b 482 Gene3D G3DSA:1.20.5.320 435 481 1.2E-26 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VP0808 776c584aa933abe712ea721fe8a36ced 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VP0808 776c584aa933abe712ea721fe8a36ced 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0808 776c584aa933abe712ea721fe8a36ced 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0808 776c584aa933abe712ea721fe8a36ced 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0808 776c584aa933abe712ea721fe8a36ced 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0808 776c584aa933abe712ea721fe8a36ced 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0808 776c584aa933abe712ea721fe8a36ced 275 PANTHER PTHR24322:SF463 146 178 5.8E-61 T 22-04-2016 VP0808 776c584aa933abe712ea721fe8a36ced 275 PANTHER PTHR24322:SF463 7 130 5.8E-61 T 22-04-2016 VP0808 776c584aa933abe712ea721fe8a36ced 275 Gene3D G3DSA:3.40.50.720 2 273 3.1E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0808 776c584aa933abe712ea721fe8a36ced 275 PANTHER PTHR24322 146 178 5.8E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0808 776c584aa933abe712ea721fe8a36ced 275 PANTHER PTHR24322 7 130 5.8E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0808 776c584aa933abe712ea721fe8a36ced 275 SUPERFAMILY SSF51735 1 271 2.28E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0808 776c584aa933abe712ea721fe8a36ced 275 Pfam PF00106 short chain dehydrogenase 3 186 2.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0137 94a04690346b4e651f9451faabd35f56 198 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 166 7.5E-13 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VP0137 94a04690346b4e651f9451faabd35f56 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.7E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0137 94a04690346b4e651f9451faabd35f56 198 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 2.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0137 94a04690346b4e651f9451faabd35f56 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 142 157 7.0E-21 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VP0137 94a04690346b4e651f9451faabd35f56 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 7.0E-21 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VP0137 94a04690346b4e651f9451faabd35f56 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 7.0E-21 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VP0137 94a04690346b4e651f9451faabd35f56 198 SUPERFAMILY SSF54523 7 98 5.81E-10 T 22-04-2016 VP0137 94a04690346b4e651f9451faabd35f56 198 Gene3D G3DSA:3.55.40.10 39 190 2.1E-46 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VP0137 94a04690346b4e651f9451faabd35f56 198 Pfam PF12019 Type II transport protein GspH 42 179 2.6E-8 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VP1628 c63a7334e6c5903f6ab1e920c48f4520 467 Gene3D G3DSA:1.10.287.950 220 434 2.0E-53 T 22-04-2016 VP1628 c63a7334e6c5903f6ab1e920c48f4520 467 PANTHER PTHR32089 119 467 1.3E-118 T 22-04-2016 VP1628 c63a7334e6c5903f6ab1e920c48f4520 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 266 462 4.3E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1628 c63a7334e6c5903f6ab1e920c48f4520 467 SUPERFAMILY SSF58104 157 466 2.35E-66 T 22-04-2016 VP1628 c63a7334e6c5903f6ab1e920c48f4520 467 PANTHER PTHR32089:SF65 119 467 1.3E-118 T 22-04-2016 VP1628 c63a7334e6c5903f6ab1e920c48f4520 467 SMART SM00283 205 466 5.9E-59 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 Pfam PF04055 Radical SAM superfamily 24 186 2.5E-26 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 SMART SM00729 19 219 1.3E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 317 6.5E-39 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 PANTHER PTHR22960 12 290 3.4E-125 T 22-04-2016 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 SUPERFAMILY SSF102114 11 294 6.67E-70 T 22-04-2016 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 Pfam PF13353 4Fe-4S single cluster domain 28 130 1.0E-8 T 22-04-2016 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 11 334 7.8E-105 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 10 334 36.957 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VP2096 623e67e32da2dfec8c0e9f81590edd6d 334 Gene3D G3DSA:3.20.20.70 10 312 6.4E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 SUPERFAMILY SSF56796 3 356 1.02E-91 T 22-04-2016 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 PANTHER PTHR11496:SF57 1 360 3.5E-171 T 22-04-2016 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 Gene3D G3DSA:1.20.1090.10 160 359 4.6E-68 T 22-04-2016 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 6.0E-69 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 PANTHER PTHR11496 1 360 3.5E-171 T 22-04-2016 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 PIRSF PIRSF000112 1 360 7.5E-95 T 22-04-2016 VP0363 4bc8166f0b78da8adb2f06caafd191ce 360 Gene3D G3DSA:3.40.50.1970 2 158 2.6E-46 T 22-04-2016 VP0873 2411e05576e0397ec9b37b9861271b6b 270 SUPERFAMILY SSF52540 1 268 7.57E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0873 2411e05576e0397ec9b37b9861271b6b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 4.2E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VP0873 2411e05576e0397ec9b37b9861271b6b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.3E-109 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 VP0873 2411e05576e0397ec9b37b9861271b6b 270 PANTHER PTHR13696 1 258 2.2E-91 T 22-04-2016 VP0873 2411e05576e0397ec9b37b9861271b6b 270 Gene3D G3DSA:3.40.50.300 1 248 6.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0873 2411e05576e0397ec9b37b9861271b6b 270 PANTHER PTHR13696:SF1 1 258 2.2E-91 T 22-04-2016 VP0873 2411e05576e0397ec9b37b9861271b6b 270 PIRSF PIRSF003092 1 270 3.9E-93 T 22-04-2016 IPR025501 ATP binding protein MinD VP0387 489c30a58ae40ea960d5a6699a54baeb 583 PANTHER PTHR30408 86 277 3.7E-14 T 22-04-2016 VP0387 489c30a58ae40ea960d5a6699a54baeb 583 PANTHER PTHR30408 319 571 3.7E-14 T 22-04-2016 VP0387 489c30a58ae40ea960d5a6699a54baeb 583 PANTHER PTHR30408:SF2 86 277 3.7E-14 T 22-04-2016 VP0387 489c30a58ae40ea960d5a6699a54baeb 583 PANTHER PTHR30408:SF2 319 571 3.7E-14 T 22-04-2016 VP0387 489c30a58ae40ea960d5a6699a54baeb 583 SUPERFAMILY SSF116734 91 276 3.6E-40 T 22-04-2016 VP0387 489c30a58ae40ea960d5a6699a54baeb 583 SUPERFAMILY SSF116734 322 346 3.6E-40 T 22-04-2016 VP0387 489c30a58ae40ea960d5a6699a54baeb 583 Pfam PF01420 Type I restriction modification DNA specificity domain 386 562 5.1E-12 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VP0387 489c30a58ae40ea960d5a6699a54baeb 583 Pfam PF01420 Type I restriction modification DNA specificity domain 99 278 2.1E-18 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VP0387 489c30a58ae40ea960d5a6699a54baeb 583 SUPERFAMILY SSF116734 370 572 7.85E-39 T 22-04-2016 VP0495 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 22-04-2016 VP0495 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 22-04-2016 VP0495 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 22-04-2016 VP0495 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 22-04-2016 VP0495 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 22-04-2016 VP0495 5a332b5be860575171aef24ea3f2cf00 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 30.198 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VP0495 5a332b5be860575171aef24ea3f2cf00 318 Pfam PF08544 GHMP kinases C terminal 218 291 3.3E-9 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP0495 5a332b5be860575171aef24ea3f2cf00 318 PANTHER PTHR20861 1 317 3.6E-123 T 22-04-2016 VP0495 5a332b5be860575171aef24ea3f2cf00 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 2.6E-13 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VP0495 5a332b5be860575171aef24ea3f2cf00 318 PIRSF PIRSF000676 1 316 3.3E-80 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VP0495 5a332b5be860575171aef24ea3f2cf00 318 SUPERFAMILY SSF54211 4 191 1.82E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0495 5a332b5be860575171aef24ea3f2cf00 318 PANTHER PTHR20861:SF1 1 317 3.6E-123 T 22-04-2016 VP0495 5a332b5be860575171aef24ea3f2cf00 318 Gene3D G3DSA:3.30.70.890 174 304 7.6E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP0495 5a332b5be860575171aef24ea3f2cf00 318 SUPERFAMILY SSF55060 178 294 5.76E-33 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP0495 5a332b5be860575171aef24ea3f2cf00 318 Gene3D G3DSA:3.30.230.10 3 165 2.8E-44 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0495 5a332b5be860575171aef24ea3f2cf00 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VP0495 5a332b5be860575171aef24ea3f2cf00 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 3.4E-109 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VP1734 ebb12445966cf44bb0431663a4b53727 218 Gene3D G3DSA:1.10.10.10 124 217 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1734 ebb12445966cf44bb0431663a4b53727 218 PANTHER PTHR26402 1 217 9.4E-102 T 22-04-2016 VP1734 ebb12445966cf44bb0431663a4b53727 218 SMART SM00862 145 216 4.5E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP1734 ebb12445966cf44bb0431663a4b53727 218 PANTHER PTHR26402:SF518 1 217 9.4E-102 T 22-04-2016 VP1734 ebb12445966cf44bb0431663a4b53727 218 Gene3D G3DSA:3.40.50.2300 1 123 3.9E-35 T 22-04-2016 VP1734 ebb12445966cf44bb0431663a4b53727 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 7.0E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP1734 ebb12445966cf44bb0431663a4b53727 218 Pfam PF00072 Response regulator receiver domain 4 112 5.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1734 ebb12445966cf44bb0431663a4b53727 218 SUPERFAMILY SSF52172 1 173 5.71E-36 T 22-04-2016 IPR011006 CheY-like superfamily VP1734 ebb12445966cf44bb0431663a4b53727 218 SMART SM00448 1 112 1.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPA1719 f662a9cca488acd7486e94c4e9c13f3c 82 PANTHER PTHR30047 1 42 6.6E-16 T 22-04-2016 VPA1719 f662a9cca488acd7486e94c4e9c13f3c 82 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 64 3.7E-17 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VPA1719 f662a9cca488acd7486e94c4e9c13f3c 82 PANTHER PTHR30047:SF2 1 42 6.6E-16 T 22-04-2016 VP1816 e10733f7d381ff4bd9300626ca3647ec 138 SUPERFAMILY SSF54197 8 132 1.18E-28 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP1816 e10733f7d381ff4bd9300626ca3647ec 138 Pfam PF01230 HIT domain 16 112 2.1E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP1816 e10733f7d381ff4bd9300626ca3647ec 138 Gene3D G3DSA:3.30.428.10 8 115 1.5E-25 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP1816 e10733f7d381ff4bd9300626ca3647ec 138 PANTHER PTHR23089 8 138 1.0E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP1816 e10733f7d381ff4bd9300626ca3647ec 138 PRINTS PR00332 Histidine triad family signature 98 108 8.1E-9 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP1816 e10733f7d381ff4bd9300626ca3647ec 138 PRINTS PR00332 Histidine triad family signature 9 25 8.1E-9 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP1816 e10733f7d381ff4bd9300626ca3647ec 138 PRINTS PR00332 Histidine triad family signature 30 48 8.1E-9 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP0025 a36ded7ebba6754b0a92000b8dfb4308 82 Pfam PF01206 Sulfurtransferase TusA 10 79 9.4E-23 T 22-04-2016 IPR001455 TusA-like domain VP0025 a36ded7ebba6754b0a92000b8dfb4308 82 SUPERFAMILY SSF64307 9 80 6.02E-25 T 22-04-2016 IPR001455 TusA-like domain VP0025 a36ded7ebba6754b0a92000b8dfb4308 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.9 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 VP0025 a36ded7ebba6754b0a92000b8dfb4308 82 PANTHER PTHR33279 1 80 1.8E-51 T 22-04-2016 VP0025 a36ded7ebba6754b0a92000b8dfb4308 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain VP0025 a36ded7ebba6754b0a92000b8dfb4308 82 Gene3D G3DSA:3.30.110.40 8 80 1.6E-28 T 22-04-2016 IPR001455 TusA-like domain VP0025 a36ded7ebba6754b0a92000b8dfb4308 82 PANTHER PTHR33279:SF5 1 80 1.8E-51 T 22-04-2016 VP1870 e236a65161eebc1ff76443cbf18ff7da 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 66 339 4.0E-74 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 VP1870 e236a65161eebc1ff76443cbf18ff7da 346 PANTHER PTHR39342:SF1 1 345 8.1E-78 T 22-04-2016 VP1870 e236a65161eebc1ff76443cbf18ff7da 346 Pfam PF05128 Domain of unknown function (DUF697) 181 339 2.3E-49 T 22-04-2016 IPR021147 Protein of unknown function DUF697 VP1870 e236a65161eebc1ff76443cbf18ff7da 346 PANTHER PTHR39342 1 345 8.1E-78 T 22-04-2016 VP1870 e236a65161eebc1ff76443cbf18ff7da 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 33.79 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 VP2251 347192c12dd10d309804029e316a95b5 469 Gene3D G3DSA:1.10.8.60 302 373 2.4E-25 T 22-04-2016 VP2251 347192c12dd10d309804029e316a95b5 469 SUPERFAMILY SSF52540 135 370 4.81E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2251 347192c12dd10d309804029e316a95b5 469 SMART SM00382 149 296 7.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2251 347192c12dd10d309804029e316a95b5 469 SMART SM00448 4 115 1.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2251 347192c12dd10d309804029e316a95b5 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP2251 347192c12dd10d309804029e316a95b5 469 SUPERFAMILY SSF52172 3 173 2.42E-40 T 22-04-2016 IPR011006 CheY-like superfamily VP2251 347192c12dd10d309804029e316a95b5 469 PANTHER PTHR32071 1 469 3.8E-266 T 22-04-2016 VP2251 347192c12dd10d309804029e316a95b5 469 Gene3D G3DSA:3.40.50.300 128 299 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2251 347192c12dd10d309804029e316a95b5 469 Gene3D G3DSA:1.10.10.60 416 459 2.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2251 347192c12dd10d309804029e316a95b5 469 Gene3D G3DSA:3.40.50.2300 3 119 7.6E-36 T 22-04-2016 VP2251 347192c12dd10d309804029e316a95b5 469 Pfam PF00072 Response regulator receiver domain 6 115 3.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2251 347192c12dd10d309804029e316a95b5 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 2.6E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2251 347192c12dd10d309804029e316a95b5 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP2251 347192c12dd10d309804029e316a95b5 469 Pfam PF00158 Sigma-54 interaction domain 134 295 1.1E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP2251 347192c12dd10d309804029e316a95b5 469 SUPERFAMILY SSF46689 342 460 7.62E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2251 347192c12dd10d309804029e316a95b5 469 PANTHER PTHR32071:SF21 1 469 3.8E-266 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 SUPERFAMILY SSF46977 425 525 2.88E-32 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 Gene3D G3DSA:3.50.50.60 349 409 1.5E-103 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 Gene3D G3DSA:3.50.50.60 2 243 1.5E-103 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 SUPERFAMILY SSF51905 5 255 9.86E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 SUPERFAMILY SSF51905 356 447 9.86E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 Gene3D G3DSA:1.20.58.100 421 522 1.1E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 PANTHER PTHR11632 5 535 2.0E-270 T 22-04-2016 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 PANTHER PTHR11632:SF27 5 535 2.0E-270 T 22-04-2016 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 Gene3D G3DSA:3.90.700.10 244 348 1.1E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VP2580 00a049d78dfeba477f1119f2e151bbe4 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.4E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 2.8E-210 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 SUPERFAMILY SSF56425 238 353 3.59E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VP2580 00a049d78dfeba477f1119f2e151bbe4 540 Pfam PF00890 FAD binding domain 10 392 2.5E-101 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VP2580 00a049d78dfeba477f1119f2e151bbe4 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.8E-9 T 22-04-2016 VP2580 00a049d78dfeba477f1119f2e151bbe4 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.8E-9 T 22-04-2016 VP0973 800718be08ab21ef0fbc3afcbef98c59 182 Gene3D G3DSA:3.40.630.30 2 177 5.3E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0973 800718be08ab21ef0fbc3afcbef98c59 182 PANTHER PTHR13256:SF43 1 180 5.8E-48 T 22-04-2016 VP0973 800718be08ab21ef0fbc3afcbef98c59 182 SUPERFAMILY SSF55729 3 177 1.62E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0973 800718be08ab21ef0fbc3afcbef98c59 182 PANTHER PTHR13256 1 180 5.8E-48 T 22-04-2016 VP0973 800718be08ab21ef0fbc3afcbef98c59 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 153 9.7E-23 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP0229 139b71459a0f1e297d5c4b5aa4e4eb27 187 Gene3D G3DSA:2.60.120.10 1 182 1.1E-78 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP0229 139b71459a0f1e297d5c4b5aa4e4eb27 187 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 179 7.6E-74 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VP0229 139b71459a0f1e297d5c4b5aa4e4eb27 187 PANTHER PTHR21047 1 180 8.3E-74 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VP0229 139b71459a0f1e297d5c4b5aa4e4eb27 187 SUPERFAMILY SSF51182 1 180 2.76E-72 T 22-04-2016 IPR011051 RmlC-like cupin domain VP0229 139b71459a0f1e297d5c4b5aa4e4eb27 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 177 1.7E-72 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VP0229 139b71459a0f1e297d5c4b5aa4e4eb27 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 187 5.0E-105 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VP1405 ee2d4d8457568d7bdb098fb432927621 582 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 580 1.5E-187 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like VP1405 ee2d4d8457568d7bdb098fb432927621 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 3.4E-202 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like VP1405 ee2d4d8457568d7bdb098fb432927621 582 PIRSF PIRSF028304 2 582 7.2E-208 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like VP1405 ee2d4d8457568d7bdb098fb432927621 582 PANTHER PTHR35370:SF4 4 582 1.6E-194 T 22-04-2016 VP1405 ee2d4d8457568d7bdb098fb432927621 582 PANTHER PTHR35370 4 582 1.6E-194 T 22-04-2016 VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 SMART SM00862 156 232 1.8E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 Gene3D G3DSA:3.40.50.2300 4 125 6.3E-42 T 22-04-2016 VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 SMART SM00448 5 116 3.8E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 Gene3D G3DSA:1.10.10.10 133 235 2.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.9E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 PANTHER PTHR26402:SF292 5 235 1.1E-113 T 22-04-2016 VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 22-04-2016 IPR011006 CheY-like superfamily VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 PANTHER PTHR26402 5 235 1.1E-113 T 22-04-2016 VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 SUPERFAMILY SSF46894 132 234 2.44E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP0154 bf80c1b9c8df171bf3f592e22978dcbf 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 Pfam PF03023 MviN-like protein 30 483 1.3E-143 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PANTHER PTHR11206 69 84 1.3E-97 T 22-04-2016 VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PANTHER PTHR11206 226 511 1.3E-97 T 22-04-2016 VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PRINTS PR01806 Virulence factor MviN signature 54 70 3.2E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PRINTS PR01806 Virulence factor MviN signature 166 187 3.2E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PRINTS PR01806 Virulence factor MviN signature 35 54 3.2E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PRINTS PR01806 Virulence factor MviN signature 142 166 3.2E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PRINTS PR01806 Virulence factor MviN signature 268 294 3.2E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PRINTS PR01806 Virulence factor MviN signature 418 435 3.2E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PRINTS PR01806 Virulence factor MviN signature 366 385 3.2E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PIRSF PIRSF002869 1 517 2.6E-148 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 1.7E-136 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PANTHER PTHR11206:SF90 69 84 1.3E-97 T 22-04-2016 VP0532 63ef5dfe7f5cc8aa48d19cebb0e713e6 520 PANTHER PTHR11206:SF90 226 511 1.3E-97 T 22-04-2016 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:3.40.50.300 4 211 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.796 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 PANTHER PTHR23115:SF151 1 392 2.6E-284 T 22-04-2016 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:2.40.30.10 212 298 2.3E-35 T 22-04-2016 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.1E-231 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 PANTHER PTHR23115 1 392 2.6E-284 T 22-04-2016 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.7E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:2.40.30.10 300 392 5.2E-47 T 22-04-2016 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.8E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF50465 298 393 1.61E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.8E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.0E-58 T 22-04-2016 VP2930 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF52540 6 219 5.86E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2352 c29c9a5ee453659f098bee235384177e 102 SUPERFAMILY SSF82657 1 89 1.07E-31 T 22-04-2016 IPR002634 BolA protein VP2352 c29c9a5ee453659f098bee235384177e 102 Gene3D G3DSA:3.30.300.90 1 100 1.0E-32 T 22-04-2016 IPR002634 BolA protein VP2352 c29c9a5ee453659f098bee235384177e 102 PANTHER PTHR12735:SF23 1 102 1.5E-53 T 22-04-2016 VP2352 c29c9a5ee453659f098bee235384177e 102 PIRSF PIRSF003113 1 99 7.6E-37 T 22-04-2016 IPR002634 BolA protein VP2352 c29c9a5ee453659f098bee235384177e 102 PANTHER PTHR12735 1 102 1.5E-53 T 22-04-2016 VP2352 c29c9a5ee453659f098bee235384177e 102 Pfam PF01722 BolA-like protein 10 83 2.5E-30 T 22-04-2016 IPR002634 BolA protein VP3045 99b6eb94aa1155656b016f26013df254 458 PANTHER PTHR13789 416 440 1.3E-83 T 22-04-2016 VP3045 99b6eb94aa1155656b016f26013df254 458 PANTHER PTHR13789 1 170 1.3E-83 T 22-04-2016 VP3045 99b6eb94aa1155656b016f26013df254 458 Pfam PF02254 TrkA-N domain 3 123 2.6E-29 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VP3045 99b6eb94aa1155656b016f26013df254 458 Pfam PF02254 TrkA-N domain 235 350 4.0E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VP3045 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.30.70.1450 391 436 7.4E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP3045 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF116726 366 437 5.75E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP3045 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.40.50.720 233 376 1.0E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VP3045 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.40.50.720 1 152 3.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VP3045 99b6eb94aa1155656b016f26013df254 458 Pfam PF02080 TrkA-C domain 391 449 5.8E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP3045 99b6eb94aa1155656b016f26013df254 458 Pfam PF02080 TrkA-C domain 156 225 4.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP3045 99b6eb94aa1155656b016f26013df254 458 PANTHER PTHR13789:SF225 416 440 1.3E-83 T 22-04-2016 VP3045 99b6eb94aa1155656b016f26013df254 458 PANTHER PTHR13789:SF225 1 170 1.3E-83 T 22-04-2016 VP3045 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF51735 232 376 1.79E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain VP3045 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP3045 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP3045 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP3045 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP3045 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP3045 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP3045 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF51735 1 151 3.04E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1967 6d4b58f00c6036ca8b330f544e69c498 393 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 157 1.0E-87 T 22-04-2016 IPR020374 Homoserine lactone synthase, LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VP1967 6d4b58f00c6036ca8b330f544e69c498 393 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 183 385 2.0E-119 T 22-04-2016 IPR020384 Homoserine lactone synthase, LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VP2051 26baf25fb72b280ace06a228de2c9d87 272 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VP2051 26baf25fb72b280ace06a228de2c9d87 272 Gene3D G3DSA:3.20.10.10 123 266 7.9E-41 T 22-04-2016 VP2051 26baf25fb72b280ace06a228de2c9d87 272 SUPERFAMILY SSF56752 1 267 7.72E-70 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VP2051 26baf25fb72b280ace06a228de2c9d87 272 PANTHER PTHR11825 1 267 9.9E-75 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VP2051 26baf25fb72b280ace06a228de2c9d87 272 Gene3D G3DSA:3.30.470.10 1 105 5.8E-32 T 22-04-2016 VP2051 26baf25fb72b280ace06a228de2c9d87 272 Pfam PF01063 Amino-transferase class IV 24 247 2.7E-46 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VP2051 26baf25fb72b280ace06a228de2c9d87 272 PANTHER PTHR11825:SF55 1 267 9.9E-75 T 22-04-2016 VP2051 26baf25fb72b280ace06a228de2c9d87 272 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 267 4.6E-108 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 VP2491 1cb3e7732bdff359d89e1a824fe577ea 337 PIRSF PIRSF002825 1 337 2.5E-102 T 22-04-2016 IPR026045 Ferric binding protein VP2491 1cb3e7732bdff359d89e1a824fe577ea 337 PANTHER PTHR30006 1 337 7.6E-183 T 22-04-2016 VP2491 1cb3e7732bdff359d89e1a824fe577ea 337 Gene3D G3DSA:3.40.190.10 120 284 2.2E-62 T 22-04-2016 VP2491 1cb3e7732bdff359d89e1a824fe577ea 337 SUPERFAMILY SSF53850 24 332 6.14E-77 T 22-04-2016 VP2491 1cb3e7732bdff359d89e1a824fe577ea 337 Gene3D G3DSA:3.40.190.10 22 114 4.8E-20 T 22-04-2016 VP2491 1cb3e7732bdff359d89e1a824fe577ea 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 1.0E-19 T 22-04-2016 VP2491 1cb3e7732bdff359d89e1a824fe577ea 337 PANTHER PTHR30006:SF4 1 337 7.6E-183 T 22-04-2016 VP2465 7eb5b8625bb8854911f760db4c6cd25b 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.3E-37 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 VP2465 7eb5b8625bb8854911f760db4c6cd25b 98 Gene3D G3DSA:3.30.110.60 1 95 2.3E-32 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VP2465 7eb5b8625bb8854911f760db4c6cd25b 98 SUPERFAMILY SSF75471 1 94 6.54E-30 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VP2465 7eb5b8625bb8854911f760db4c6cd25b 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VP2465 7eb5b8625bb8854911f760db4c6cd25b 98 SMART SM01103 3 86 1.6E-41 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VP2465 7eb5b8625bb8854911f760db4c6cd25b 98 PANTHER PTHR31846 1 98 2.5E-41 T 22-04-2016 VP2465 7eb5b8625bb8854911f760db4c6cd25b 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.1E-20 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VP0525 af977a858c0f2136e9ca7b672301ad50 385 Pfam PF08014 Domain of unknown function (DUF1704) 47 383 4.5E-119 T 22-04-2016 IPR012548 Protein of unknown function DUF1704 VP0525 af977a858c0f2136e9ca7b672301ad50 385 SMART SM01154 46 385 3.1E-160 T 22-04-2016 IPR012548 Protein of unknown function DUF1704 VP0525 af977a858c0f2136e9ca7b672301ad50 385 PANTHER PTHR31817 135 362 1.8E-47 T 22-04-2016 VP0525 af977a858c0f2136e9ca7b672301ad50 385 PANTHER PTHR31817 13 64 1.8E-47 T 22-04-2016 VP0525 af977a858c0f2136e9ca7b672301ad50 385 PANTHER PTHR31817 80 112 1.8E-47 T 22-04-2016 VP0525 af977a858c0f2136e9ca7b672301ad50 385 PANTHER PTHR31817:SF4 135 362 1.8E-47 T 22-04-2016 VP0525 af977a858c0f2136e9ca7b672301ad50 385 PANTHER PTHR31817:SF4 13 64 1.8E-47 T 22-04-2016 VP0525 af977a858c0f2136e9ca7b672301ad50 385 PANTHER PTHR31817:SF4 80 112 1.8E-47 T 22-04-2016 VP0525 af977a858c0f2136e9ca7b672301ad50 385 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 21 378 5.7E-135 T 22-04-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VPA0099 d4d32a4ef874a2def03db0380a1cf466 81 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 16 29 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPA0099 d4d32a4ef874a2def03db0380a1cf466 81 PANTHER PTHR32071 1 81 2.9E-42 T 22-04-2016 VPA0099 d4d32a4ef874a2def03db0380a1cf466 81 SUPERFAMILY SSF52540 2 80 5.75E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0099 d4d32a4ef874a2def03db0380a1cf466 81 Gene3D G3DSA:3.40.50.300 2 80 8.4E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0099 d4d32a4ef874a2def03db0380a1cf466 81 Pfam PF00158 Sigma-54 interaction domain 2 81 6.8E-33 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPA0099 d4d32a4ef874a2def03db0380a1cf466 81 PANTHER PTHR32071:SF18 1 81 2.9E-42 T 22-04-2016 VP2553 e13d9cbcf5463590185ba41952310bff 319 PRINTS PR00046 Major sigma-70 factor signature 283 298 3.5E-17 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 PRINTS PR00046 Major sigma-70 factor signature 114 127 3.5E-17 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 PRINTS PR00046 Major sigma-70 factor signature 138 146 3.5E-17 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 PRINTS PR00046 Major sigma-70 factor signature 262 274 3.5E-17 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 SUPERFAMILY SSF88659 163 236 2.01E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 PANTHER PTHR30603:SF15 1 291 5.4E-161 T 22-04-2016 VP2553 e13d9cbcf5463590185ba41952310bff 319 Pfam PF04542 Sigma-70 region 2 90 159 6.1E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 Pfam PF04539 Sigma-70 region 3 170 243 2.3E-22 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 Pfam PF04545 Sigma-70, region 4 258 292 1.4E-6 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 PANTHER PTHR30603 1 291 5.4E-161 T 22-04-2016 VP2553 e13d9cbcf5463590185ba41952310bff 319 SUPERFAMILY SSF88659 220 292 7.66E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 Gene3D G3DSA:1.10.10.10 255 292 1.9E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2553 e13d9cbcf5463590185ba41952310bff 319 Pfam PF00140 Sigma-70 factor, region 1.2 52 85 4.2E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 Gene3D G3DSA:1.10.601.10 25 159 2.3E-58 T 22-04-2016 VP2553 e13d9cbcf5463590185ba41952310bff 319 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 297 1.3E-122 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 SUPERFAMILY SSF88946 51 160 8.9E-46 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 86 292 5.7E-29 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 16 318 34.294 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2553 e13d9cbcf5463590185ba41952310bff 319 Gene3D G3DSA:1.10.10.10 163 212 1.6E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2553 e13d9cbcf5463590185ba41952310bff 319 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 114 127 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:3.90.800.10 68 183 5.2E-37 T 22-04-2016 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:3.40.50.620 184 233 1.6E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:3.40.50.620 2 67 1.6E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:1.10.1160.10 236 316 5.3E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 SUPERFAMILY SSF52374 3 301 2.44E-110 T 22-04-2016 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 9.7E-117 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 PANTHER PTHR11451:SF41 3 315 3.1E-102 T 22-04-2016 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 PANTHER PTHR11451 3 315 3.1E-102 T 22-04-2016 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 SUPERFAMILY SSF48163 302 464 1.19E-47 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:1.10.10.350 366 464 4.2E-31 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 464 33.728 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VP0762 0c0926c5de091201ba9862b14bd0f1c2 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 468 2.5E-198 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.2E-33 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 SUPERFAMILY SSF64518 1 373 6.28E-77 T 22-04-2016 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 2.1E-20 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 PRINTS PR00207 Flagellin signature 75 94 2.2E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 PRINTS PR00207 Flagellin signature 36 53 2.2E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 PRINTS PR00207 Flagellin signature 110 133 2.2E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 Pfam PF07196 Flagellin hook IN motif 201 245 2.4E-7 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 Gene3D G3DSA:1.20.1330.10 276 329 1.2E-46 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 Gene3D G3DSA:1.20.1330.10 55 169 1.2E-46 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 PANTHER PTHR30244 2 373 4.1E-105 T 22-04-2016 VP0791 59a9b1a30e2488c26d6b01feb3fe8e66 374 PANTHER PTHR30244:SF1 2 373 4.1E-105 T 22-04-2016 VP0418 a15cd5ea85fe881c35f30392eb122d80 419 PANTHER PTHR11101:SF63 1 418 3.2E-262 T 22-04-2016 VP0418 a15cd5ea85fe881c35f30392eb122d80 419 PANTHER PTHR11101 1 418 3.2E-262 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VP0418 a15cd5ea85fe881c35f30392eb122d80 419 Pfam PF01384 Phosphate transporter family 26 407 5.2E-119 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 4.3E-62 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 1.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 1.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 1.3E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 SUPERFAMILY SSF51230 77 152 1.3E-26 T 22-04-2016 IPR011053 Single hybrid motif VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 Gene3D G3DSA:2.40.50.100 76 152 2.4E-33 T 22-04-2016 VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 22-04-2016 IPR001882 Biotin-binding site VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 Pfam PF00364 Biotin-requiring enzyme 77 151 1.1E-25 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VP2880 8fb9470f6cd9039697ec4a88abb512c5 152 PANTHER PTHR23151 1 152 1.4E-53 T 22-04-2016 VP2619 a73aca0141407ee70a26b5a7eef476ec 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 20.511 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VP2619 a73aca0141407ee70a26b5a7eef476ec 96 SUPERFAMILY SSF69786 3 96 5.62E-32 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VP2619 a73aca0141407ee70a26b5a7eef476ec 96 PANTHER PTHR13420 12 96 2.0E-24 T 22-04-2016 VP2619 a73aca0141407ee70a26b5a7eef476ec 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 1.2E-26 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 VP2619 a73aca0141407ee70a26b5a7eef476ec 96 SMART SM01152 8 84 8.2E-39 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VP2619 a73aca0141407ee70a26b5a7eef476ec 96 Gene3D G3DSA:3.30.1200.10 2 91 5.1E-30 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VP2619 a73aca0141407ee70a26b5a7eef476ec 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 2.2E-25 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VP2631 431abf84680d72c7e96d51fbecd0341c 417 Gene3D G3DSA:1.10.3210.10 164 317 3.7E-19 T 22-04-2016 IPR006674 HD domain VP2631 431abf84680d72c7e96d51fbecd0341c 417 SUPERFAMILY SSF109604 160 330 7.07E-27 T 22-04-2016 VP2631 431abf84680d72c7e96d51fbecd0341c 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 2.8E-30 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 VP2631 431abf84680d72c7e96d51fbecd0341c 417 SMART SM00471 164 300 2.0E-8 T 22-04-2016 IPR003607 HD/PDEase domain VP2631 431abf84680d72c7e96d51fbecd0341c 417 Pfam PF01966 HD domain 170 290 5.5E-16 T 22-04-2016 IPR006674 HD domain VP0834 3952965b605a6891a0c88c3ffb1f1393 167 SUPERFAMILY SSF54637 10 156 1.94E-23 T 22-04-2016 IPR029069 HotDog domain VP0834 3952965b605a6891a0c88c3ffb1f1393 167 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 2.4E-24 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 VP0834 3952965b605a6891a0c88c3ffb1f1393 167 Gene3D G3DSA:3.10.129.10 12 157 4.4E-36 T 22-04-2016 IPR029069 HotDog domain VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.629 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 1.7E-103 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 Gene3D G3DSA:3.40.50.20 1 82 6.0E-21 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 SUPERFAMILY SSF51246 299 371 2.12E-19 T 22-04-2016 IPR011054 Rudiment single hybrid motif VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 SUPERFAMILY SSF56059 92 295 7.95E-56 T 22-04-2016 VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 PANTHER PTHR11609:SF5 3 355 1.2E-113 T 22-04-2016 VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 SUPERFAMILY SSF52440 1 88 2.3E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 Gene3D G3DSA:3.30.470.20 177 360 2.0E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 PANTHER PTHR11609 3 355 1.2E-113 T 22-04-2016 VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 Gene3D G3DSA:3.30.1490.20 108 165 2.6E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP3037 fd1e4eb51a2b7e98c539aceb541ba487 377 Pfam PF02222 ATP-grasp domain 101 274 1.4E-50 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VP0044 b199e79947f37fb148b3410914f3d9aa 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 203 7.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VP0044 b199e79947f37fb148b3410914f3d9aa 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 209 1.0E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VP0044 b199e79947f37fb148b3410914f3d9aa 241 PANTHER PTHR12725:SF57 2 239 3.9E-43 T 22-04-2016 VP0044 b199e79947f37fb148b3410914f3d9aa 241 SUPERFAMILY SSF56784 3 237 1.14E-42 T 22-04-2016 IPR023214 HAD-like domain VP0044 b199e79947f37fb148b3410914f3d9aa 241 Gene3D G3DSA:3.40.50.1000 3 232 7.1E-39 T 22-04-2016 IPR023214 HAD-like domain VP0044 b199e79947f37fb148b3410914f3d9aa 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 8.2E-23 T 22-04-2016 IPR023214 HAD-like domain VP0044 b199e79947f37fb148b3410914f3d9aa 241 PANTHER PTHR12725 2 239 3.9E-43 T 22-04-2016 VP2521 c7e672acbb1f87d8af163f4994a995e2 183 SMART SM00644 18 169 1.1E-54 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VP2521 c7e672acbb1f87d8af163f4994a995e2 183 SUPERFAMILY SSF55846 4 182 4.06E-65 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VP2521 c7e672acbb1f87d8af163f4994a995e2 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 2.2E-22 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VP2521 c7e672acbb1f87d8af163f4994a995e2 183 Gene3D G3DSA:3.40.80.10 5 182 3.2E-66 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VP2521 c7e672acbb1f87d8af163f4994a995e2 183 PANTHER PTHR30417 4 183 1.3E-77 T 22-04-2016 VP2521 c7e672acbb1f87d8af163f4994a995e2 183 PANTHER PTHR30417:SF4 4 183 1.3E-77 T 22-04-2016 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 Gene3D G3DSA:3.90.400.10 110 179 1.1E-31 T 22-04-2016 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 PANTHER PTHR10357:SF170 456 561 5.2E-272 T 22-04-2016 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 PANTHER PTHR10357:SF170 10 424 5.2E-272 T 22-04-2016 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 SUPERFAMILY SSF51445 9 477 6.61E-165 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 SMART SM00642 18 419 2.5E-165 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 2.3E-9 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 Pfam PF00128 Alpha amylase, catalytic domain 33 375 2.1E-128 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 Gene3D G3DSA:2.60.40.1180 482 559 6.6E-20 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 Gene3D G3DSA:3.20.20.80 180 479 9.0E-130 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 Gene3D G3DSA:3.20.20.80 8 109 9.0E-130 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 SUPERFAMILY SSF51011 480 559 6.48E-16 T 22-04-2016 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 3.2E-268 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 PANTHER PTHR10357 456 561 5.2E-272 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VP0711 d3ee0bf2a6a5d38ab6567f983d34b4b3 561 PANTHER PTHR10357 10 424 5.2E-272 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 SUPERFAMILY SSF56024 248 425 7.85E-27 T 22-04-2016 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 PANTHER PTHR12586:SF3 9 445 6.6E-229 T 22-04-2016 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 PIRSF PIRSF000850 2 446 4.2E-214 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 SUPERFAMILY SSF56024 14 181 5.76E-26 T 22-04-2016 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 Gene3D G3DSA:3.30.870.10 20 181 1.7E-16 T 22-04-2016 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 Gene3D G3DSA:3.30.870.10 247 408 4.1E-21 T 22-04-2016 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 Pfam PF13091 PLD-like domain 251 402 1.1E-25 T 22-04-2016 IPR025202 Phospholipase D-like domain VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 Pfam PF13091 PLD-like domain 34 147 6.8E-7 T 22-04-2016 IPR025202 Phospholipase D-like domain VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 SMART SM00155 347 374 0.0078 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 SMART SM00155 126 152 7.7E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VP2934 f04eb9952d39acce1afd384aeb7b7dac 446 PANTHER PTHR12586 9 445 6.6E-229 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VP2858 fef8431caeaf550e3913c4f4165f333d 229 SMART SM00448 2 111 4.6E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2858 fef8431caeaf550e3913c4f4165f333d 229 Pfam PF00072 Response regulator receiver domain 4 112 9.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2858 fef8431caeaf550e3913c4f4165f333d 229 SMART SM00862 149 225 1.4E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP2858 fef8431caeaf550e3913c4f4165f333d 229 SUPERFAMILY SSF46894 124 226 9.07E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP2858 fef8431caeaf550e3913c4f4165f333d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 6.4E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP2858 fef8431caeaf550e3913c4f4165f333d 229 Gene3D G3DSA:1.10.10.10 126 227 3.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2858 fef8431caeaf550e3913c4f4165f333d 229 PANTHER PTHR26402:SF614 2 228 3.9E-78 T 22-04-2016 VP2858 fef8431caeaf550e3913c4f4165f333d 229 SUPERFAMILY SSF52172 1 123 1.85E-39 T 22-04-2016 IPR011006 CheY-like superfamily VP2858 fef8431caeaf550e3913c4f4165f333d 229 PANTHER PTHR26402 2 228 3.9E-78 T 22-04-2016 VP2858 fef8431caeaf550e3913c4f4165f333d 229 Gene3D G3DSA:3.40.50.2300 1 123 4.2E-39 T 22-04-2016 VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 214 9.7E-88 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.42 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 PANTHER PTHR11264:SF10 6 224 1.3E-161 T 22-04-2016 VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 SMART SM00986 49 210 5.5E-40 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 7.3E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 SMART SM00987 49 210 5.5E-40 T 22-04-2016 VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 Gene3D G3DSA:3.40.470.10 4 222 4.6E-103 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 SUPERFAMILY SSF52141 4 222 4.86E-97 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VP0500 babe5d4bd326c1bcb5b0197bdab83076 226 PANTHER PTHR11264 6 224 1.3E-161 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 549 579 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 232 366 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 402 491 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 1 162 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 186 196 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.0E-24 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VP1214 4c747ac1703d21191154c0936577229f 583 SMART SM00487 1 177 1.6E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP1214 4c747ac1703d21191154c0936577229f 583 Pfam PF00271 Helicase conserved C-terminal domain 240 343 9.1E-14 T 22-04-2016 IPR001650 Helicase, C-terminal VP1214 4c747ac1703d21191154c0936577229f 583 SMART SM00490 265 344 1.1E-10 T 22-04-2016 IPR001650 Helicase, C-terminal VP1214 4c747ac1703d21191154c0936577229f 583 Gene3D G3DSA:3.40.50.300 2 154 1.5E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1214 4c747ac1703d21191154c0936577229f 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VP1214 4c747ac1703d21191154c0936577229f 583 SUPERFAMILY SSF52540 48 173 3.53E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1214 4c747ac1703d21191154c0936577229f 583 SUPERFAMILY SSF52540 236 360 3.53E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1214 4c747ac1703d21191154c0936577229f 583 Gene3D G3DSA:3.40.50.300 236 364 1.1E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 549 579 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 232 366 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 402 491 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 1 162 4.7E-155 T 22-04-2016 VP1214 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 186 196 4.7E-155 T 22-04-2016 VP0443 a893671035d3d515bb610a7dc544dd4e 245 Gene3D G3DSA:1.10.760.10 16 210 3.5E-62 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0443 a893671035d3d515bb610a7dc544dd4e 245 SUPERFAMILY SSF46626 16 208 6.59E-50 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0443 a893671035d3d515bb610a7dc544dd4e 245 PANTHER PTHR10266:SF3 188 245 3.4E-70 T 22-04-2016 VP0443 a893671035d3d515bb610a7dc544dd4e 245 PANTHER PTHR10266:SF3 1 162 3.4E-70 T 22-04-2016 VP0443 a893671035d3d515bb610a7dc544dd4e 245 Gene3D G3DSA:1.20.5.100 214 245 1.8E-9 T 22-04-2016 VP0443 a893671035d3d515bb610a7dc544dd4e 245 PANTHER PTHR10266 188 245 3.4E-70 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VP0443 a893671035d3d515bb610a7dc544dd4e 245 PANTHER PTHR10266 1 162 3.4E-70 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VP0443 a893671035d3d515bb610a7dc544dd4e 245 Pfam PF02167 Cytochrome C1 family 33 244 5.1E-16 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 SUPERFAMILY SSF55186 2 95 1.52E-32 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 SUPERFAMILY SSF55681 86 129 1.16E-5 T 22-04-2016 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 PANTHER PTHR11451:SF31 1 129 1.8E-77 T 22-04-2016 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 PANTHER PTHR11451 1 129 1.8E-77 T 22-04-2016 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 Gene3D G3DSA:3.30.54.20 2 37 3.2E-16 T 22-04-2016 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 Gene3D G3DSA:3.30.980.10 38 74 1.4E-12 T 22-04-2016 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 SMART SM00863 24 73 5.1E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 Gene3D G3DSA:3.30.930.10 75 128 3.6E-16 T 22-04-2016 VPA1278 4c6e4b9683b7505d44a0a6623b747043 129 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 26 73 5.9E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VP0275 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.5E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VP0275 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VP0275 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VP0275 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VP0275 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 4.5E-33 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VP0275 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.0E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VP0275 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site VP0275 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PANTHER PTHR15892 1 58 2.5E-30 T 22-04-2016 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 SUPERFAMILY SSF52172 4 173 7.55E-27 T 22-04-2016 IPR011006 CheY-like superfamily VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 Gene3D G3DSA:3.40.50.2300 4 131 1.8E-29 T 22-04-2016 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 PANTHER PTHR26402:SF474 5 204 6.2E-95 T 22-04-2016 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 3.6E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 Pfam PF00072 Response regulator receiver domain 7 120 6.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 PANTHER PTHR26402 5 204 6.2E-95 T 22-04-2016 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 SMART SM00448 5 119 4.9E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 SMART SM00421 147 204 5.0E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 Gene3D G3DSA:1.10.10.10 142 206 5.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2866 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2225 dff045c1cb20c6f035a88be390ce1c3a 164 PANTHER PTHR22617 14 164 7.8E-111 T 22-04-2016 VP2225 dff045c1cb20c6f035a88be390ce1c3a 164 SMART SM00260 16 153 2.5E-50 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2225 dff045c1cb20c6f035a88be390ce1c3a 164 SUPERFAMILY SSF50341 15 158 9.29E-42 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2225 dff045c1cb20c6f035a88be390ce1c3a 164 PANTHER PTHR22617:SF26 14 164 7.8E-111 T 22-04-2016 VP2225 dff045c1cb20c6f035a88be390ce1c3a 164 Pfam PF01584 CheW-like domain 20 155 4.6E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2225 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.40.50.180 59 94 1.1E-8 T 22-04-2016 VP2225 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.30.30.40 95 146 1.0E-8 T 22-04-2016 VP0379 5464d997a37488109fafd185cc5da92d 267 Pfam PF03180 NLPA lipoprotein 31 267 1.2E-86 T 22-04-2016 IPR004872 Lipoprotein NlpA family VP0379 5464d997a37488109fafd185cc5da92d 267 SUPERFAMILY SSF53850 31 267 1.88E-82 T 22-04-2016 VP0379 5464d997a37488109fafd185cc5da92d 267 PANTHER PTHR30429 7 267 8.6E-115 T 22-04-2016 IPR004872 Lipoprotein NlpA family VP0379 5464d997a37488109fafd185cc5da92d 267 Gene3D G3DSA:3.40.190.10 28 159 2.8E-54 T 22-04-2016 VP0379 5464d997a37488109fafd185cc5da92d 267 PIRSF PIRSF002854 3 267 9.1E-89 T 22-04-2016 IPR004872 Lipoprotein NlpA family VP2652 bc726e283dda04b14567b526bff27707 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 45.023 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737 149 291 4.1E-124 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737 2 91 4.1E-124 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737 310 407 4.1E-124 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:1.10.3930.10 68 135 9.8E-4 T 22-04-2016 VP2652 bc726e283dda04b14567b526bff27707 407 PIRSF PIRSF006356 1 407 5.0E-156 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:3.75.10.10 149 407 2.2E-127 T 22-04-2016 VP2652 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:3.75.10.10 1 67 2.2E-127 T 22-04-2016 VP2652 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737:SF13 149 291 4.1E-124 T 22-04-2016 VP2652 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737:SF13 2 91 4.1E-124 T 22-04-2016 VP2652 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737:SF13 310 407 4.1E-124 T 22-04-2016 VP2652 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 3.2E-173 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VP2652 bc726e283dda04b14567b526bff27707 407 SUPERFAMILY SSF55909 3 407 3.93E-129 T 22-04-2016 VP2652 bc726e283dda04b14567b526bff27707 407 Pfam PF02274 Amidinotransferase 19 404 4.4E-97 T 22-04-2016 VP2288 3f98b4ffc630fce87f110445e677e630 191 PANTHER PTHR30390:SF6 2 191 2.9E-91 T 22-04-2016 VP2288 3f98b4ffc630fce87f110445e677e630 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.834 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VP2288 3f98b4ffc630fce87f110445e677e630 191 PANTHER PTHR30390 2 191 2.9E-91 T 22-04-2016 VP2288 3f98b4ffc630fce87f110445e677e630 191 SUPERFAMILY SSF53697 1 189 4.25E-52 T 22-04-2016 VP2288 3f98b4ffc630fce87f110445e677e630 191 Gene3D G3DSA:3.40.50.10490 1 190 6.4E-64 T 22-04-2016 VP2288 3f98b4ffc630fce87f110445e677e630 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.6E-81 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VP2288 3f98b4ffc630fce87f110445e677e630 191 Pfam PF13580 SIS domain 12 146 6.0E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VP2476 008064e014d7ffd25f66525b32f61cde 361 Pfam PF01594 Domain of unknown function DUF20 14 347 2.6E-54 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VP2476 008064e014d7ffd25f66525b32f61cde 361 PANTHER PTHR21716 9 361 7.1E-104 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VP2476 008064e014d7ffd25f66525b32f61cde 361 PANTHER PTHR21716:SF13 9 361 7.1E-104 T 22-04-2016 VP2742 b3be7139d510eaa8c961d87e592146d2 279 PANTHER PTHR30481 2 268 5.5E-120 T 22-04-2016 VP2742 b3be7139d510eaa8c961d87e592146d2 279 Gene3D G3DSA:1.10.1020.10 60 156 4.1E-34 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VP2742 b3be7139d510eaa8c961d87e592146d2 279 SUPERFAMILY SSF53335 5 268 7.75E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2742 b3be7139d510eaa8c961d87e592146d2 279 Gene3D G3DSA:3.40.50.150 1 59 1.6E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2742 b3be7139d510eaa8c961d87e592146d2 279 Gene3D G3DSA:3.40.50.150 160 267 1.6E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2742 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VP2742 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VP2742 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VP2742 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VP2742 b3be7139d510eaa8c961d87e592146d2 279 PANTHER PTHR30481:SF3 2 268 5.5E-120 T 22-04-2016 VP2742 b3be7139d510eaa8c961d87e592146d2 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP2742 b3be7139d510eaa8c961d87e592146d2 279 PIRSF PIRSF000398 1 274 1.2E-72 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VP2742 b3be7139d510eaa8c961d87e592146d2 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.3E-67 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VP2742 b3be7139d510eaa8c961d87e592146d2 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 2.5E-94 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VP2258 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF07196 Flagellin hook IN motif 196 247 2.7E-9 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VP2258 5397bff4f825b40bedc0ae170e05d253 376 PANTHER PTHR30244 2 375 2.5E-160 T 22-04-2016 VP2258 5397bff4f825b40bedc0ae170e05d253 376 SUPERFAMILY SSF64518 1 375 1.44E-94 T 22-04-2016 VP2258 5397bff4f825b40bedc0ae170e05d253 376 PANTHER PTHR30244:SF1 2 375 2.5E-160 T 22-04-2016 VP2258 5397bff4f825b40bedc0ae170e05d253 376 Gene3D G3DSA:1.20.1330.10 278 331 4.9E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2258 5397bff4f825b40bedc0ae170e05d253 376 Gene3D G3DSA:1.20.1330.10 54 171 4.9E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2258 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.2E-41 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2258 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 8.5E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2258 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP2258 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP2258 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP1041 573e62c214db143c796f0578bb5a1b08 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 190 498 8.8E-135 T 22-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VP1041 573e62c214db143c796f0578bb5a1b08 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 1.2E-58 T 22-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VP2941 0dfeaa01c9a16513eb6b2e55f8032998 213 PANTHER PTHR30055:SF39 1 206 5.7E-106 T 22-04-2016 VP2941 0dfeaa01c9a16513eb6b2e55f8032998 213 Gene3D G3DSA:1.10.357.10 5 195 8.5E-36 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VP2941 0dfeaa01c9a16513eb6b2e55f8032998 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VP2941 0dfeaa01c9a16513eb6b2e55f8032998 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP2941 0dfeaa01c9a16513eb6b2e55f8032998 213 PANTHER PTHR30055 1 206 5.7E-106 T 22-04-2016 VP2941 0dfeaa01c9a16513eb6b2e55f8032998 213 SUPERFAMILY SSF46689 5 80 3.64E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1995 15643517afb2d5e16f325062c73a360d 239 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1995 15643517afb2d5e16f325062c73a360d 239 SUPERFAMILY SSF52540 6 227 1.19E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1995 15643517afb2d5e16f325062c73a360d 239 PANTHER PTHR24220 8 227 1.9E-123 T 22-04-2016 VP1995 15643517afb2d5e16f325062c73a360d 239 SMART SM00382 35 222 6.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1995 15643517afb2d5e16f325062c73a360d 239 Pfam PF00005 ABC transporter 26 174 6.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1995 15643517afb2d5e16f325062c73a360d 239 PANTHER PTHR24220:SF578 8 227 1.9E-123 T 22-04-2016 VP1995 15643517afb2d5e16f325062c73a360d 239 Gene3D G3DSA:3.40.50.300 5 226 5.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 4.2E-183 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 Pfam PF07687 Peptidase dimerisation domain 211 296 1.5E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PANTHER PTHR11014 208 283 5.8E-201 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PANTHER PTHR11014 1 189 5.8E-201 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 2.7E-21 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 7.1E-90 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 SUPERFAMILY SSF53187 401 486 1.28E-62 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 SUPERFAMILY SSF53187 15 186 1.28E-62 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PANTHER PTHR11014:SF54 208 283 5.8E-201 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PANTHER PTHR11014:SF54 334 490 5.8E-201 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PANTHER PTHR11014:SF54 1 189 5.8E-201 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PIRSF PIRSF016599 5 489 1.7E-217 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 Gene3D G3DSA:3.40.630.10 7 185 9.9E-108 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 Gene3D G3DSA:3.40.630.10 401 488 9.9E-108 T 22-04-2016 VP0671 02243d2a0bd62f869f5d97d4d0d427b5 490 PANTHER PTHR11014 334 490 5.8E-201 T 22-04-2016 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 SUPERFAMILY SSF51735 1 146 1.71E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 Gene3D G3DSA:3.40.50.720 1 141 1.9E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 Gene3D G3DSA:3.30.360.10 142 350 2.9E-76 T 22-04-2016 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 SUPERFAMILY SSF55347 133 354 1.96E-78 T 22-04-2016 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 119 1.1E-21 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 SMART SM00859 2 121 3.8E-21 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 PANTHER PTHR10174 200 367 2.0E-152 T 22-04-2016 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 PANTHER PTHR10174 102 178 2.0E-152 T 22-04-2016 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.897 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 6.9E-189 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 1.6E-57 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 PIRSF PIRSF000148 1 371 1.7E-65 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 PANTHER PTHR10174:SF116 200 367 2.0E-152 T 22-04-2016 VP2124 2dfc957fbaf7c954bd4fe1dd6fbfc8e2 371 PANTHER PTHR10174:SF116 102 178 2.0E-152 T 22-04-2016 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 SUPERFAMILY SSF51064 143 198 4.84E-20 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.876 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 SUPERFAMILY SSF58014 44 142 9.15E-30 T 22-04-2016 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Pfam PF01025 GrpE 35 198 2.8E-52 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PANTHER PTHR21237 24 198 8.7E-66 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Gene3D G3DSA:2.30.22.10 142 198 1.1E-27 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Gene3D G3DSA:3.90.20.20 42 141 1.8E-33 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 177 196 3.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 67 83 3.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 95 110 3.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VP0651 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 150 165 3.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VP0426 5aae4baab680b4f8bd60d770e4f2082e 216 Gene3D G3DSA:3.90.79.10 15 201 1.7E-53 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP0426 5aae4baab680b4f8bd60d770e4f2082e 216 Pfam PF00293 NUDIX domain 57 175 3.0E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VP0426 5aae4baab680b4f8bd60d770e4f2082e 216 PANTHER PTHR11839 1 207 1.6E-108 T 22-04-2016 VP0426 5aae4baab680b4f8bd60d770e4f2082e 216 SUPERFAMILY SSF55811 13 206 3.38E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP0426 5aae4baab680b4f8bd60d770e4f2082e 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VP0426 5aae4baab680b4f8bd60d770e4f2082e 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 9.7E-65 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 VP0426 5aae4baab680b4f8bd60d770e4f2082e 216 PANTHER PTHR11839:SF5 1 207 1.6E-108 T 22-04-2016 VP0704 aeacf76cc294c13f0711566bf49b010a 269 Gene3D G3DSA:3.40.190.10 31 162 8.4E-57 T 22-04-2016 VP0704 aeacf76cc294c13f0711566bf49b010a 269 SUPERFAMILY SSF53850 32 269 3.49E-78 T 22-04-2016 VP0704 aeacf76cc294c13f0711566bf49b010a 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.0E-126 T 22-04-2016 IPR004872 Lipoprotein NlpA family VP0704 aeacf76cc294c13f0711566bf49b010a 269 Pfam PF03180 NLPA lipoprotein 33 269 7.0E-98 T 22-04-2016 IPR004872 Lipoprotein NlpA family VP0704 aeacf76cc294c13f0711566bf49b010a 269 PIRSF PIRSF002854 1 269 6.1E-99 T 22-04-2016 IPR004872 Lipoprotein NlpA family VP0704 aeacf76cc294c13f0711566bf49b010a 269 PANTHER PTHR30429:SF1 3 269 4.0E-140 T 22-04-2016 VP0704 aeacf76cc294c13f0711566bf49b010a 269 PANTHER PTHR30429 3 269 4.0E-140 T 22-04-2016 IPR004872 Lipoprotein NlpA family VP1250 6151cff35e8d156ba602f737fd86fd9f 595 SUPERFAMILY SSF52540 348 580 3.34E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1250 6151cff35e8d156ba602f737fd86fd9f 595 Gene3D G3DSA:1.20.1560.10 10 330 1.1E-49 T 22-04-2016 VP1250 6151cff35e8d156ba602f737fd86fd9f 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1250 6151cff35e8d156ba602f737fd86fd9f 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 4.0E-178 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VP1250 6151cff35e8d156ba602f737fd86fd9f 595 SMART SM00382 375 594 6.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1250 6151cff35e8d156ba602f737fd86fd9f 595 SUPERFAMILY SSF90123 5 331 1.07E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1250 6151cff35e8d156ba602f737fd86fd9f 595 Pfam PF00664 ABC transporter transmembrane region 24 292 5.0E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1250 6151cff35e8d156ba602f737fd86fd9f 595 PANTHER PTHR24221:SF261 1 595 0.0 T 22-04-2016 VP1250 6151cff35e8d156ba602f737fd86fd9f 595 PANTHER PTHR24221 1 595 0.0 T 22-04-2016 VP1250 6151cff35e8d156ba602f737fd86fd9f 595 Gene3D G3DSA:3.40.50.300 358 587 3.8E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1250 6151cff35e8d156ba602f737fd86fd9f 595 Pfam PF00005 ABC transporter 369 512 1.7E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 SUPERFAMILY SSF52304 4 146 2.88E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.0E-64 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 Pfam PF01220 Dehydroquinase class II 6 142 3.2E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-70 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 Gene3D G3DSA:3.40.50.9100 4 147 3.7E-69 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.015 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 PANTHER PTHR21272 2 149 1.2E-88 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP2879 800c2b25c5cc882db08ed97f660cfd23 149 PIRSF PIRSF001399 3 149 6.3E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 PANTHER PTHR32305 3 607 6.9E-149 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 PANTHER PTHR32305 656 677 6.9E-149 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 Gene3D G3DSA:3.55.50.10 96 187 6.5E-34 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 SUPERFAMILY SSF69349 444 683 1.73E-48 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 SUPERFAMILY SSF69279 7 183 6.23E-56 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 SUPERFAMILY SSF69279 200 364 3.4E-33 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 SUPERFAMILY SSF69255 367 454 6.54E-32 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 3.8E-200 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 Gene3D G3DSA:2.40.50.230 372 454 9.6E-39 T 22-04-2016 IPR006531 Gp5 N-terminal VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 3.7E-125 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 PANTHER PTHR32305:SF11 3 607 6.9E-149 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 PANTHER PTHR32305:SF11 656 677 6.9E-149 T 22-04-2016 VP1394 ff5b56eef70e0b86e4cd9078fca92d6a 692 Pfam PF05954 Phage late control gene D protein (GPD) 26 331 1.1E-76 T 22-04-2016 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 PANTHER PTHR11654:SF119 3 462 7.0E-179 T 22-04-2016 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 SUPERFAMILY SSF103473 7 435 3.4E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 PANTHER PTHR11654 3 462 7.0E-179 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 Gene3D G3DSA:1.20.1250.20 237 437 1.4E-9 T 22-04-2016 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 Gene3D G3DSA:1.20.1250.20 14 212 4.5E-20 T 22-04-2016 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 Pfam PF00854 POT family 85 197 4.6E-29 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 Pfam PF00854 POT family 230 405 3.9E-31 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 227 440 9.3E-47 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 VP0824 25cd18bdbdb5bc2fdd4236c944153403 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 215 1.2E-59 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 VP1077 2596b48c8bb8b48cdffe0bbfa98e9c26 412 Pfam PF13356 Domain of unknown function (DUF4102) 8 93 1.1E-11 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 VP1077 2596b48c8bb8b48cdffe0bbfa98e9c26 412 Gene3D G3DSA:1.10.150.130 106 198 3.2E-17 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VP1077 2596b48c8bb8b48cdffe0bbfa98e9c26 412 PANTHER PTHR30629 2 405 1.7E-136 T 22-04-2016 VP1077 2596b48c8bb8b48cdffe0bbfa98e9c26 412 Gene3D G3DSA:1.10.443.10 212 384 1.4E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP1077 2596b48c8bb8b48cdffe0bbfa98e9c26 412 PANTHER PTHR30629:SF2 2 405 1.7E-136 T 22-04-2016 VP1077 2596b48c8bb8b48cdffe0bbfa98e9c26 412 Pfam PF00589 Phage integrase family 212 375 1.1E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP1077 2596b48c8bb8b48cdffe0bbfa98e9c26 412 SUPERFAMILY SSF56349 106 385 2.8E-60 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP1077 2596b48c8bb8b48cdffe0bbfa98e9c26 412 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 156 9.5E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VP0067 1e60997610a26d4528570d193eb4cea5 310 Gene3D G3DSA:1.10.10.10 19 101 2.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0067 1e60997610a26d4528570d193eb4cea5 310 SUPERFAMILY SSF46785 19 101 1.47E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0067 1e60997610a26d4528570d193eb4cea5 310 SUPERFAMILY SSF53850 107 309 1.16E-19 T 22-04-2016 VP0067 1e60997610a26d4528570d193eb4cea5 310 Gene3D G3DSA:3.40.190.10 109 194 2.9E-13 T 22-04-2016 VP0067 1e60997610a26d4528570d193eb4cea5 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 5.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0067 1e60997610a26d4528570d193eb4cea5 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 5.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0067 1e60997610a26d4528570d193eb4cea5 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 5.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0067 1e60997610a26d4528570d193eb4cea5 310 Gene3D G3DSA:3.40.190.10 195 279 3.0E-15 T 22-04-2016 VP0067 1e60997610a26d4528570d193eb4cea5 310 PANTHER PTHR30346:SF4 16 305 2.5E-65 T 22-04-2016 VP0067 1e60997610a26d4528570d193eb4cea5 310 PANTHER PTHR30346 16 305 2.5E-65 T 22-04-2016 VP0067 1e60997610a26d4528570d193eb4cea5 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 79 1.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0067 1e60997610a26d4528570d193eb4cea5 310 Pfam PF03466 LysR substrate binding domain 107 308 1.2E-20 T 22-04-2016 IPR005119 LysR, substrate-binding VP2152 6c5e698298050b4bec0b59776d0cc336 616 PANTHER PTHR33209 1 614 1.3E-218 T 22-04-2016 VP2152 6c5e698298050b4bec0b59776d0cc336 616 PANTHER PTHR33209:SF1 1 614 1.3E-218 T 22-04-2016 VP2152 6c5e698298050b4bec0b59776d0cc336 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 2.4E-193 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VP2152 6c5e698298050b4bec0b59776d0cc336 616 SUPERFAMILY SSF52096 315 439 6.78E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2152 6c5e698298050b4bec0b59776d0cc336 616 SUPERFAMILY SSF52096 209 284 4.76E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2152 6c5e698298050b4bec0b59776d0cc336 616 SUPERFAMILY SSF52096 467 529 6.78E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2152 6c5e698298050b4bec0b59776d0cc336 616 Pfam PF01343 Peptidase family S49 391 541 2.1E-46 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VP2152 6c5e698298050b4bec0b59776d0cc336 616 Pfam PF01343 Peptidase family S49 138 294 5.8E-31 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VP2152 6c5e698298050b4bec0b59776d0cc336 616 SUPERFAMILY SSF52096 53 178 4.76E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2152 6c5e698298050b4bec0b59776d0cc336 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 2.3E-52 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VP2152 6c5e698298050b4bec0b59776d0cc336 616 PIRSF PIRSF001217 8 616 1.0E-227 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VP2152 6c5e698298050b4bec0b59776d0cc336 616 Gene3D G3DSA:3.90.226.10 29 174 4.4E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2152 6c5e698298050b4bec0b59776d0cc336 616 Gene3D G3DSA:3.90.226.10 468 552 4.7E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2152 6c5e698298050b4bec0b59776d0cc336 616 Gene3D G3DSA:3.90.226.10 217 313 4.4E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2152 6c5e698298050b4bec0b59776d0cc336 616 Gene3D G3DSA:3.90.226.10 323 431 4.7E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2846 b50117efce79a78affd4ff1ac2656130 340 Pfam PF04055 Radical SAM superfamily 117 263 2.8E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP2846 b50117efce79a78affd4ff1ac2656130 340 Pfam PF13353 4Fe-4S single cluster domain 114 183 1.7E-7 T 22-04-2016 VP2846 b50117efce79a78affd4ff1ac2656130 340 SUPERFAMILY SSF102114 102 323 1.44E-29 T 22-04-2016 VP2846 b50117efce79a78affd4ff1ac2656130 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 4.2E-131 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VP2846 b50117efce79a78affd4ff1ac2656130 340 PIRSF PIRSF004911 3 340 2.5E-119 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VP2846 b50117efce79a78affd4ff1ac2656130 340 PANTHER PTHR30538:SF1 13 337 9.4E-138 T 22-04-2016 VP2846 b50117efce79a78affd4ff1ac2656130 340 Gene3D G3DSA:3.20.20.70 105 314 2.8E-19 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2846 b50117efce79a78affd4ff1ac2656130 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.5E-159 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like VP2846 b50117efce79a78affd4ff1ac2656130 340 PANTHER PTHR30538 13 337 9.4E-138 T 22-04-2016 VP1390 4bc18cb85b053088a98c18a91253c7c7 1580 SUPERFAMILY SSF103088 609 720 9.94E-17 T 22-04-2016 IPR006665 OmpA-like domain VP1390 4bc18cb85b053088a98c18a91253c7c7 1580 Gene3D G3DSA:3.30.1330.60 605 720 3.9E-19 T 22-04-2016 IPR006665 OmpA-like domain VP1390 4bc18cb85b053088a98c18a91253c7c7 1580 Pfam PF00691 OmpA family 609 706 7.9E-14 T 22-04-2016 IPR006665 OmpA-like domain VP1390 4bc18cb85b053088a98c18a91253c7c7 1580 PANTHER PTHR30128 630 721 2.1E-12 T 22-04-2016 VP2011 3c017b62d6ae7c97a7cb0ca86f9e733c 255 SUPERFAMILY SSF54862 47 231 4.5E-66 T 22-04-2016 VP2011 3c017b62d6ae7c97a7cb0ca86f9e733c 255 PANTHER PTHR11938:SF86 47 248 7.0E-81 T 22-04-2016 VP2011 3c017b62d6ae7c97a7cb0ca86f9e733c 255 Gene3D G3DSA:3.30.70.20 161 243 9.8E-28 T 22-04-2016 VP2011 3c017b62d6ae7c97a7cb0ca86f9e733c 255 Gene3D G3DSA:3.30.70.20 47 118 2.8E-14 T 22-04-2016 VP2011 3c017b62d6ae7c97a7cb0ca86f9e733c 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP2011 3c017b62d6ae7c97a7cb0ca86f9e733c 255 Pfam PF13247 4Fe-4S dicluster domain 102 196 3.9E-30 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP2011 3c017b62d6ae7c97a7cb0ca86f9e733c 255 PANTHER PTHR11938 47 248 7.0E-81 T 22-04-2016 VP2011 3c017b62d6ae7c97a7cb0ca86f9e733c 255 Gene3D G3DSA:3.30.70.20 119 160 9.6E-24 T 22-04-2016 VP2319 0a72eff7f25236de1b92d187bb787f37 292 PANTHER PTHR10804 1 289 1.0E-144 T 22-04-2016 VP2319 0a72eff7f25236de1b92d187bb787f37 292 Gene3D G3DSA:3.90.230.10 3 286 5.8E-93 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP2319 0a72eff7f25236de1b92d187bb787f37 292 SUPERFAMILY SSF55920 3 282 1.7E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP2319 0a72eff7f25236de1b92d187bb787f37 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VP2319 0a72eff7f25236de1b92d187bb787f37 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 3.3E-83 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VP2319 0a72eff7f25236de1b92d187bb787f37 292 Pfam PF00557 Metallopeptidase family M24 12 271 3.4E-45 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP2319 0a72eff7f25236de1b92d187bb787f37 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.656 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VP2319 0a72eff7f25236de1b92d187bb787f37 292 PANTHER PTHR10804:SF75 1 289 1.0E-144 T 22-04-2016 VP1979 701227fc8746dd77043521c61316bfc3 818 SUPERFAMILY SSF55785 126 239 1.29E-15 T 22-04-2016 IPR000014 PAS domain VP1979 701227fc8746dd77043521c61316bfc3 818 Pfam PF00989 PAS fold 132 238 2.3E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 VP1979 701227fc8746dd77043521c61316bfc3 818 Gene3D G3DSA:3.10.580.10 689 816 8.0E-8 T 22-04-2016 VP1979 701227fc8746dd77043521c61316bfc3 818 PANTHER PTHR33121:SF10 334 696 1.5E-76 T 22-04-2016 VP1979 701227fc8746dd77043521c61316bfc3 818 SMART SM00052 417 663 3.7E-66 T 22-04-2016 IPR001633 EAL domain VP1979 701227fc8746dd77043521c61316bfc3 818 Gene3D G3DSA:3.30.450.20 128 239 5.1E-13 T 22-04-2016 VP1979 701227fc8746dd77043521c61316bfc3 818 Gene3D G3DSA:3.20.20.450 420 661 2.9E-71 T 22-04-2016 IPR001633 EAL domain VP1979 701227fc8746dd77043521c61316bfc3 818 Pfam PF00563 EAL domain 426 657 2.3E-61 T 22-04-2016 IPR001633 EAL domain VP1979 701227fc8746dd77043521c61316bfc3 818 SMART SM00091 128 194 6.0E-6 T 22-04-2016 IPR000014 PAS domain VP1979 701227fc8746dd77043521c61316bfc3 818 SUPERFAMILY SSF54631 688 816 9.05E-8 T 22-04-2016 VP1979 701227fc8746dd77043521c61316bfc3 818 SUPERFAMILY SSF141868 424 661 3.01E-66 T 22-04-2016 IPR001633 EAL domain VP1979 701227fc8746dd77043521c61316bfc3 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 240 1.8E-10 T 22-04-2016 IPR000014 PAS domain VP1979 701227fc8746dd77043521c61316bfc3 818 PANTHER PTHR33121 334 696 1.5E-76 T 22-04-2016 VP2721 6a855b78fe9856acd15d338e45312ae4 578 PANTHER PTHR11493:SF47 20 567 9.7E-274 T 22-04-2016 VP2721 6a855b78fe9856acd15d338e45312ae4 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 1.3E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 7.7E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Gene3D G3DSA:3.30.413.10 436 565 9.9E-34 T 22-04-2016 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Gene3D G3DSA:3.30.413.10 154 346 5.3E-71 T 22-04-2016 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 5.2E-5 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 336 1.5E-45 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Gene3D G3DSA:3.90.480.10 348 429 3.9E-61 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Gene3D G3DSA:3.90.480.10 79 151 3.9E-61 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 PANTHER PTHR11493 20 567 9.7E-274 T 22-04-2016 VP2721 6a855b78fe9856acd15d338e45312ae4 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.616 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 5.8E-287 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 SUPERFAMILY SSF56014 154 350 4.45E-58 T 22-04-2016 VP2721 6a855b78fe9856acd15d338e45312ae4 578 SUPERFAMILY SSF55124 352 430 2.13E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2721 6a855b78fe9856acd15d338e45312ae4 578 SUPERFAMILY SSF56014 435 566 4.45E-32 T 22-04-2016 VP2721 6a855b78fe9856acd15d338e45312ae4 578 SUPERFAMILY SSF55124 18 150 1.31E-27 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP0669 d2de917bb5b4dd172425efd484822c4a 356 Gene3D G3DSA:3.40.630.10 35 232 4.8E-25 T 22-04-2016 VP0669 d2de917bb5b4dd172425efd484822c4a 356 PIRSF PIRSF039012 3 325 1.9E-92 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VP0669 d2de917bb5b4dd172425efd484822c4a 356 PANTHER PTHR37326 9 337 4.8E-117 T 22-04-2016 VP0669 d2de917bb5b4dd172425efd484822c4a 356 SUPERFAMILY SSF53187 22 318 2.25E-76 T 22-04-2016 VP0669 d2de917bb5b4dd172425efd484822c4a 356 PANTHER PTHR37326:SF1 9 337 4.8E-117 T 22-04-2016 VP0669 d2de917bb5b4dd172425efd484822c4a 356 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 6.1E-73 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VP0669 d2de917bb5b4dd172425efd484822c4a 356 Gene3D G3DSA:2.40.50.100 248 316 3.8E-6 T 22-04-2016 VP2178 64c2fd2fad0ef404856ca911a187fa18 109 PIRSF PIRSF004555 3 109 5.6E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VP2178 64c2fd2fad0ef404856ca911a187fa18 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.6E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VP2178 64c2fd2fad0ef404856ca911a187fa18 109 SUPERFAMILY SSF82607 11 103 1.01E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VP2178 64c2fd2fad0ef404856ca911a187fa18 109 Gene3D G3DSA:3.30.1310.10 1 109 1.5E-51 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VP2178 64c2fd2fad0ef404856ca911a187fa18 109 PANTHER PTHR33449:SF1 1 109 1.7E-54 T 22-04-2016 VP2178 64c2fd2fad0ef404856ca911a187fa18 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.4E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VP2178 64c2fd2fad0ef404856ca911a187fa18 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.43 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VP2178 64c2fd2fad0ef404856ca911a187fa18 109 PANTHER PTHR33449 1 109 1.7E-54 T 22-04-2016 VP0915 5d50c32187414a772e25144bc192e576 600 SMART SM00387 483 593 4.2E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0915 5d50c32187414a772e25144bc192e576 600 PIRSF PIRSF036431 1 599 4.0E-192 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VP0915 5d50c32187414a772e25144bc192e576 600 Gene3D G3DSA:1.10.287.130 372 436 2.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0915 5d50c32187414a772e25144bc192e576 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 590 1.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0915 5d50c32187414a772e25144bc192e576 600 SUPERFAMILY SSF103190 48 187 7.85E-29 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VP0915 5d50c32187414a772e25144bc192e576 600 Gene3D G3DSA:3.30.565.10 443 591 2.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0915 5d50c32187414a772e25144bc192e576 600 PANTHER PTHR24423 349 591 5.1E-130 T 22-04-2016 VP0915 5d50c32187414a772e25144bc192e576 600 PANTHER PTHR24423 82 179 5.1E-130 T 22-04-2016 VP0915 5d50c32187414a772e25144bc192e576 600 PANTHER PTHR24423:SF451 349 591 5.1E-130 T 22-04-2016 VP0915 5d50c32187414a772e25144bc192e576 600 PANTHER PTHR24423:SF451 82 179 5.1E-130 T 22-04-2016 VP0915 5d50c32187414a772e25144bc192e576 600 SUPERFAMILY SSF47384 367 440 3.34E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0915 5d50c32187414a772e25144bc192e576 600 Pfam PF02743 Cache domain 37 216 2.0E-12 T 22-04-2016 IPR033479 Double Cache domain 1 VP0915 5d50c32187414a772e25144bc192e576 600 SMART SM00388 372 440 1.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0915 5d50c32187414a772e25144bc192e576 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 439 4.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0915 5d50c32187414a772e25144bc192e576 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0915 5d50c32187414a772e25144bc192e576 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0915 5d50c32187414a772e25144bc192e576 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0915 5d50c32187414a772e25144bc192e576 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0915 5d50c32187414a772e25144bc192e576 600 Gene3D G3DSA:3.30.450.20 63 183 7.5E-6 T 22-04-2016 VP0915 5d50c32187414a772e25144bc192e576 600 SUPERFAMILY SSF55874 440 593 2.75E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2104 dbbf027ae697bdb233212f630a62438b 869 Pfam PF10531 SLBB domain 296 345 2.8E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain VP2104 dbbf027ae697bdb233212f630a62438b 869 SUPERFAMILY SSF142019 95 302 1.11E-59 T 22-04-2016 VP2104 dbbf027ae697bdb233212f630a62438b 869 SUPERFAMILY SSF46548 336 446 1.02E-21 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP2104 dbbf027ae697bdb233212f630a62438b 869 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP2104 dbbf027ae697bdb233212f630a62438b 869 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP2104 dbbf027ae697bdb233212f630a62438b 869 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 3.5E-190 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VP2104 dbbf027ae697bdb233212f630a62438b 869 Gene3D G3DSA:1.10.1060.10 366 449 3.3E-19 T 22-04-2016 VP2104 dbbf027ae697bdb233212f630a62438b 869 PANTHER PTHR11780 1 483 4.3E-236 T 22-04-2016 VP2104 dbbf027ae697bdb233212f630a62438b 869 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 761 253.166 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VP2104 dbbf027ae697bdb233212f630a62438b 869 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.4E-47 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain VP2104 dbbf027ae697bdb233212f630a62438b 869 PANTHER PTHR11780:SF1 1 483 4.3E-236 T 22-04-2016 VP2104 dbbf027ae697bdb233212f630a62438b 869 Pfam PF12838 4Fe-4S dicluster domain 378 430 3.9E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP2104 dbbf027ae697bdb233212f630a62438b 869 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 3.9E-34 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 Gene3D G3DSA:1.10.10.10 138 192 4.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.43E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.43E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.43E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 SUPERFAMILY SSF46894 134 193 2.45E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 PANTHER PTHR26402:SF599 6 194 1.5E-76 T 22-04-2016 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 Gene3D G3DSA:3.40.50.2300 9 137 6.3E-31 T 22-04-2016 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 SMART SM00421 137 194 8.1E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 Pfam PF00072 Response regulator receiver domain 9 117 3.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 PANTHER PTHR26402 6 194 1.5E-76 T 22-04-2016 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 SUPERFAMILY SSF52172 10 142 8.97E-32 T 22-04-2016 IPR011006 CheY-like superfamily VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 SMART SM00448 6 117 2.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1202 ee452c6c28e6cba094d16d451f17aaa5 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 7.2E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1604 902b67666006565c133f492d49a2ae28 868 Gene3D G3DSA:1.25.50.10 545 866 6.2E-119 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VP1604 902b67666006565c133f492d49a2ae28 868 Pfam PF11940 Domain of unknown function (DUF3458) 457 824 2.8E-132 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VP1604 902b67666006565c133f492d49a2ae28 868 SUPERFAMILY SSF63737 2 192 8.37E-46 T 22-04-2016 VP1604 902b67666006565c133f492d49a2ae28 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VP1604 902b67666006565c133f492d49a2ae28 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VP1604 902b67666006565c133f492d49a2ae28 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VP1604 902b67666006565c133f492d49a2ae28 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VP1604 902b67666006565c133f492d49a2ae28 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VP1604 902b67666006565c133f492d49a2ae28 868 Gene3D G3DSA:1.10.390.10 307 450 9.0E-32 T 22-04-2016 VP1604 902b67666006565c133f492d49a2ae28 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VP1604 902b67666006565c133f492d49a2ae28 868 PANTHER PTHR11533 10 584 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VP1604 902b67666006565c133f492d49a2ae28 868 PANTHER PTHR11533 608 868 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VP1604 902b67666006565c133f492d49a2ae28 868 SUPERFAMILY SSF55486 202 449 1.74E-74 T 22-04-2016 VP1604 902b67666006565c133f492d49a2ae28 868 PANTHER PTHR11533:SF152 10 584 0.0 T 22-04-2016 VP1604 902b67666006565c133f492d49a2ae28 868 PANTHER PTHR11533:SF152 608 868 0.0 T 22-04-2016 VP1604 902b67666006565c133f492d49a2ae28 868 Pfam PF01433 Peptidase family M1 50 383 1.5E-67 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VP1790 2b535dbac0d42bd164cd2c28b747370d 134 PANTHER PTHR28620:SF2 1 132 1.1E-39 T 22-04-2016 VP1790 2b535dbac0d42bd164cd2c28b747370d 134 SUPERFAMILY SSF51316 10 131 2.62E-31 T 22-04-2016 IPR011057 Mss4-like VP1790 2b535dbac0d42bd164cd2c28b747370d 134 PANTHER PTHR28620 1 132 1.1E-39 T 22-04-2016 VP1790 2b535dbac0d42bd164cd2c28b747370d 134 Gene3D G3DSA:3.90.1590.10 8 112 4.1E-19 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 VP1790 2b535dbac0d42bd164cd2c28b747370d 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 115 1.5E-9 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 VP0091 3db2d952bf3ff34774f58501bffef1f6 342 PANTHER PTHR21716:SF16 17 334 4.5E-66 T 22-04-2016 VP0091 3db2d952bf3ff34774f58501bffef1f6 342 Pfam PF01594 Domain of unknown function DUF20 14 332 1.6E-47 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VP0091 3db2d952bf3ff34774f58501bffef1f6 342 PANTHER PTHR21716 17 334 4.5E-66 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VP1350 4788105b353f517dc122861acba85fc4 376 Pfam PF04209 homogentisate 1,2-dioxygenase 87 374 5.4E-22 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 VP1350 4788105b353f517dc122861acba85fc4 376 Gene3D G3DSA:2.60.120.10 67 165 2.4E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1350 4788105b353f517dc122861acba85fc4 376 PANTHER PTHR11056 92 374 7.2E-70 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 VP1350 4788105b353f517dc122861acba85fc4 376 SUPERFAMILY SSF51182 77 374 1.74E-91 T 22-04-2016 IPR011051 RmlC-like cupin domain VP1350 4788105b353f517dc122861acba85fc4 376 Gene3D G3DSA:2.60.120.10 216 352 5.0E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 SUPERFAMILY SSF51735 6 170 6.19E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 Gene3D G3DSA:3.40.50.720 5 170 1.7E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PANTHER PTHR32092 3 439 1.6E-250 T 22-04-2016 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PANTHER PTHR32092:SF5 3 439 1.6E-250 T 22-04-2016 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 6.8E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 6.8E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 6.8E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 6.8E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 6.8E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 6.8E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 6.8E-48 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 Gene3D G3DSA:3.90.110.10 171 435 8.3E-102 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 3.1E-51 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 SUPERFAMILY SSF56327 173 436 7.31E-95 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VP2634 b0bdb20a0690eee412a1cbe20df8fc96 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 8.4E-62 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VP1364 3367e7726dd4c0f025f9f01ee136a84c 323 Pfam PF02470 MlaD protein 39 137 5.4E-14 T 22-04-2016 IPR003399 Mce/MlaD VP1627 c31b6ecf396997f5f84ab85a76007473 90 Pfam PF00708 Acylphosphatase 6 89 2.9E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VP1627 c31b6ecf396997f5f84ab85a76007473 90 SUPERFAMILY SSF54975 4 89 1.16E-28 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VP1627 c31b6ecf396997f5f84ab85a76007473 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VP1627 c31b6ecf396997f5f84ab85a76007473 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VP1627 c31b6ecf396997f5f84ab85a76007473 90 Gene3D G3DSA:3.30.70.100 5 89 7.5E-31 T 22-04-2016 VP1627 c31b6ecf396997f5f84ab85a76007473 90 PANTHER PTHR10029 4 90 1.6E-24 T 22-04-2016 VP1932 9c91540df67b879754c93545ff651b6c 878 PANTHER PTHR10169:SF48 2 417 0.0 T 22-04-2016 VP1932 9c91540df67b879754c93545ff651b6c 878 PANTHER PTHR10169:SF48 449 811 0.0 T 22-04-2016 VP1932 9c91540df67b879754c93545ff651b6c 878 Gene3D G3DSA:2.120.10.90 530 838 4.2E-141 T 22-04-2016 VP1932 9c91540df67b879754c93545ff651b6c 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 SUPERFAMILY SSF56719 30 520 2.75E-188 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VP1932 9c91540df67b879754c93545ff651b6c 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.6E-158 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 SMART SM00434 11 498 0.0 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 Gene3D G3DSA:3.30.1360.40 236 332 1.8E-40 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VP1932 9c91540df67b879754c93545ff651b6c 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 842 30.251 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 Gene3D G3DSA:1.10.268.10 362 496 5.0E-51 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 6.2E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.2E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 8.2E-16 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 4.8E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.8E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VP1932 9c91540df67b879754c93545ff651b6c 878 SUPERFAMILY SSF101904 532 851 5.89E-114 T 22-04-2016 VP1932 9c91540df67b879754c93545ff651b6c 878 PANTHER PTHR10169 2 417 0.0 T 22-04-2016 VP1932 9c91540df67b879754c93545ff651b6c 878 PANTHER PTHR10169 449 811 0.0 T 22-04-2016 VP1932 9c91540df67b879754c93545ff651b6c 878 Gene3D G3DSA:3.90.199.10 34 216 1.2E-85 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF13500 AAA domain 3 229 3.7E-51 T 22-04-2016 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF53659 392 709 2.22E-96 T 22-04-2016 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF75138 229 353 1.18E-23 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like VP2083 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.50.10750 524 682 8.6E-69 T 22-04-2016 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.3E-125 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 PANTHER PTHR23406 178 714 9.7E-56 T 22-04-2016 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF52540 1 240 1.33E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2083 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.50.300 2 222 2.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2083 ccb74bf723d39b610e1c9049eefa485f 714 PIRSF PIRSF006107 1 714 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 PANTHER PTHR23406:SF3 178 714 9.7E-56 T 22-04-2016 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF07085 DRTGG domain 233 344 8.9E-27 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VP2083 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.1390.20 226 364 2.7E-27 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like VP2083 ccb74bf723d39b610e1c9049eefa485f 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.2E-132 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VP0430 189715dca42c275023db87ab3d6f0395 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0430 189715dca42c275023db87ab3d6f0395 626 Pfam PF00204 DNA gyrase B 218 384 2.1E-42 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 SMART SM00387 27 173 3.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 47.007 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 Pfam PF01751 Toprim domain 413 521 8.7E-12 T 22-04-2016 IPR006171 Toprim domain VP0430 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF54211 217 382 2.47E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0430 189715dca42c275023db87ab3d6f0395 626 PANTHER PTHR10169 1 622 0.0 T 22-04-2016 VP0430 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.30.230.10 216 390 2.7E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0430 189715dca42c275023db87ab3d6f0395 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PANTHER PTHR10169:SF45 1 622 0.0 T 22-04-2016 VP0430 189715dca42c275023db87ab3d6f0395 626 SMART SM00433 34 622 8.9E-217 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.40.50.670 398 609 3.2E-79 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP0430 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF56719 388 619 9.15E-80 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VP0430 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF55874 5 215 3.3E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0430 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.30.565.10 15 213 1.2E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0430 189715dca42c275023db87ab3d6f0395 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 6.6E-27 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VP2223 0fc3836204db696ab9fa613f1fe84f5c 205 PANTHER PTHR24220:SF508 3 189 9.0E-94 T 22-04-2016 VP2223 0fc3836204db696ab9fa613f1fe84f5c 205 Pfam PF00005 ABC transporter 18 158 5.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2223 0fc3836204db696ab9fa613f1fe84f5c 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2223 0fc3836204db696ab9fa613f1fe84f5c 205 SMART SM00382 26 205 9.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2223 0fc3836204db696ab9fa613f1fe84f5c 205 Gene3D G3DSA:3.40.50.300 1 190 1.7E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2223 0fc3836204db696ab9fa613f1fe84f5c 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.9E-77 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 VP2223 0fc3836204db696ab9fa613f1fe84f5c 205 SUPERFAMILY SSF52540 2 193 4.75E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2223 0fc3836204db696ab9fa613f1fe84f5c 205 PANTHER PTHR24220 3 189 9.0E-94 T 22-04-2016 VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PANTHER PTHR24322:SF635 153 185 7.0E-50 T 22-04-2016 VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PANTHER PTHR24322:SF635 7 137 7.0E-50 T 22-04-2016 VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PANTHER PTHR24322 153 185 7.0E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PANTHER PTHR24322 7 137 7.0E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 SUPERFAMILY SSF51735 3 240 8.66E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 Gene3D G3DSA:3.40.50.720 4 241 3.8E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.9E-126 T 22-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 4.1E-58 T 22-04-2016 VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0882 32dc70156aca238fd3d67e5a6ff651b7 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0013 T 22-04-2016 VP2497 87800a2626a8bfeb20a141e453892bd6 790 SUPERFAMILY SSF53955 190 383 5.91E-69 T 22-04-2016 IPR023346 Lysozyme-like domain VP2497 87800a2626a8bfeb20a141e453892bd6 790 Gene3D G3DSA:3.30.2060.10 92 181 3.0E-29 T 22-04-2016 VP2497 87800a2626a8bfeb20a141e453892bd6 790 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 49 772 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP2497 87800a2626a8bfeb20a141e453892bd6 790 Pfam PF00912 Transglycosylase 190 360 1.5E-59 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VP2497 87800a2626a8bfeb20a141e453892bd6 790 Gene3D G3DSA:3.40.710.10 364 776 4.9E-108 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2497 87800a2626a8bfeb20a141e453892bd6 790 Gene3D G3DSA:1.10.3810.10 187 363 6.4E-68 T 22-04-2016 VP2497 87800a2626a8bfeb20a141e453892bd6 790 PANTHER PTHR32282 177 741 3.3E-260 T 22-04-2016 VP2497 87800a2626a8bfeb20a141e453892bd6 790 Pfam PF14814 Bifunctional transglycosylase second domain 94 178 5.0E-27 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP2497 87800a2626a8bfeb20a141e453892bd6 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 194 727 2.6E-157 T 22-04-2016 VP2497 87800a2626a8bfeb20a141e453892bd6 790 PIRSF PIRSF002799 11 790 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP2497 87800a2626a8bfeb20a141e453892bd6 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 453 692 3.1E-23 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VP2497 87800a2626a8bfeb20a141e453892bd6 790 SUPERFAMILY SSF56601 343 365 6.39E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2497 87800a2626a8bfeb20a141e453892bd6 790 SUPERFAMILY SSF56601 393 777 6.39E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2497 87800a2626a8bfeb20a141e453892bd6 790 PANTHER PTHR32282:SF11 177 741 3.3E-260 T 22-04-2016 VP2739 651a2b034d77ed5ba0c119708376fd32 100 PIRSF PIRSF003135 1 100 1.1E-46 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VP2739 651a2b034d77ed5ba0c119708376fd32 100 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 28.938 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VP2739 651a2b034d77ed5ba0c119708376fd32 100 Pfam PF00436 Single-strand binding protein family 3 88 8.0E-7 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VP2739 651a2b034d77ed5ba0c119708376fd32 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 3.0E-31 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VP2739 651a2b034d77ed5ba0c119708376fd32 100 SUPERFAMILY SSF50249 1 99 2.19E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2739 651a2b034d77ed5ba0c119708376fd32 100 Gene3D G3DSA:2.40.50.140 1 100 1.3E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0116 b837abefd564236271724f1b6a2cf0a6 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 1.5E-90 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 VP0116 b837abefd564236271724f1b6a2cf0a6 334 SUPERFAMILY SSF51556 3 325 3.74E-76 T 22-04-2016 IPR032466 Metal-dependent hydrolase VP0116 b837abefd564236271724f1b6a2cf0a6 334 Gene3D G3DSA:3.20.20.140 2 333 1.1E-98 T 22-04-2016 VP0116 b837abefd564236271724f1b6a2cf0a6 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 6.8E-123 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 VP0116 b837abefd564236271724f1b6a2cf0a6 334 PANTHER PTHR11409 2 333 1.7E-104 T 22-04-2016 VP0116 b837abefd564236271724f1b6a2cf0a6 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 55.034 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VP1929 a0bb81cea9219006ab089f6386342153 475 Gene3D G3DSA:1.10.780.10 116 316 6.6E-19 T 22-04-2016 VP1929 a0bb81cea9219006ab089f6386342153 475 SUPERFAMILY SSF48695 36 470 3.67E-163 T 22-04-2016 IPR011031 Multihaem cytochrome VP1929 a0bb81cea9219006ab089f6386342153 475 Gene3D G3DSA:1.20.140.10 317 444 1.8E-54 T 22-04-2016 VP1929 a0bb81cea9219006ab089f6386342153 475 PIRSF PIRSF000243 24 474 3.9E-123 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VP1929 a0bb81cea9219006ab089f6386342153 475 PANTHER PTHR30633 6 475 5.8E-139 T 22-04-2016 VP1929 a0bb81cea9219006ab089f6386342153 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 58.031 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VP1929 a0bb81cea9219006ab089f6386342153 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 37 473 7.8E-246 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VP1929 a0bb81cea9219006ab089f6386342153 475 Pfam PF02335 Cytochrome c552 41 470 1.2E-178 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 PANTHER PTHR32089:SF31 8 541 1.8E-217 T 22-04-2016 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 PANTHER PTHR32089 8 541 1.8E-217 T 22-04-2016 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 Gene3D G3DSA:1.10.287.950 292 505 3.1E-56 T 22-04-2016 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 SMART SM01049 30 124 8.3E-20 T 22-04-2016 IPR033480 Single Cache domain 2 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 3.0E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 3.0E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 3.0E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 Pfam PF17200 Single Cache domain 2 36 185 3.0E-34 T 22-04-2016 IPR033480 Single Cache domain 2 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 SMART SM00283 277 538 6.7E-70 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 537 7.3E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 SUPERFAMILY SSF58104 246 539 1.57E-69 T 22-04-2016 VP2629 e03c2dc4dfa46b7b6a49bb5800335dec 541 Gene3D G3DSA:3.30.450.20 18 178 8.8E-34 T 22-04-2016 VP1107 3541390d9f734cf51f3980b70d88ee52 449 PANTHER PTHR13779 8 449 3.6E-200 T 22-04-2016 VP1107 3541390d9f734cf51f3980b70d88ee52 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 1.4E-16 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP1107 3541390d9f734cf51f3980b70d88ee52 449 Pfam PF16193 AAA C-terminal domain 191 268 2.0E-19 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain VP1107 3541390d9f734cf51f3980b70d88ee52 449 SUPERFAMILY SSF48019 253 435 2.32E-73 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VP1107 3541390d9f734cf51f3980b70d88ee52 449 PANTHER PTHR13779:SF7 8 449 3.6E-200 T 22-04-2016 VP1107 3541390d9f734cf51f3980b70d88ee52 449 Gene3D G3DSA:1.10.8.60 155 243 1.7E-7 T 22-04-2016 VP1107 3541390d9f734cf51f3980b70d88ee52 449 Gene3D G3DSA:3.40.50.300 13 154 3.7E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1107 3541390d9f734cf51f3980b70d88ee52 449 SMART SM00382 50 166 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1107 3541390d9f734cf51f3980b70d88ee52 449 Gene3D G3DSA:1.20.272.10 250 348 3.2E-43 T 22-04-2016 VP1107 3541390d9f734cf51f3980b70d88ee52 449 SUPERFAMILY SSF52540 11 236 1.66E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1107 3541390d9f734cf51f3980b70d88ee52 449 Gene3D G3DSA:1.10.3710.10 349 448 4.3E-34 T 22-04-2016 VP1107 3541390d9f734cf51f3980b70d88ee52 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.6E-67 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal VP0171 7ed1c5ad9fba6775eef590aa4cb9d054 347 Gene3D G3DSA:1.10.3720.10 136 340 1.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0171 7ed1c5ad9fba6775eef590aa4cb9d054 347 PANTHER PTHR30325 1 347 1.2E-112 T 22-04-2016 VP0171 7ed1c5ad9fba6775eef590aa4cb9d054 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 4.8E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0171 7ed1c5ad9fba6775eef590aa4cb9d054 347 SUPERFAMILY SSF161098 139 325 5.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1987 331926f64647764483bd8bd1bcc99c81 182 Pfam PF00857 Isochorismatase family 9 157 4.0E-30 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VP1987 331926f64647764483bd8bd1bcc99c81 182 Gene3D G3DSA:3.40.50.850 2 182 1.0E-53 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VP1987 331926f64647764483bd8bd1bcc99c81 182 SUPERFAMILY SSF52499 3 182 2.09E-46 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VP1987 331926f64647764483bd8bd1bcc99c81 182 PANTHER PTHR14119 1 182 5.9E-49 T 22-04-2016 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 Gene3D G3DSA:3.30.830.10 472 706 2.0E-67 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 Gene3D G3DSA:3.30.830.10 4 229 3.1E-74 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 Gene3D G3DSA:3.30.830.10 707 918 3.2E-47 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 4.7E-39 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 SUPERFAMILY SSF63411 232 468 1.15E-80 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 PANTHER PTHR11851:SF131 377 918 0.0 T 22-04-2016 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 SUPERFAMILY SSF63411 4 227 3.32E-60 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 Gene3D G3DSA:3.30.830.10 240 471 2.1E-74 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 PANTHER PTHR11851 377 918 0.0 T 22-04-2016 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 SUPERFAMILY SSF63411 470 694 1.12E-60 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 PANTHER PTHR11851 4 360 0.0 T 22-04-2016 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 PANTHER PTHR11851:SF131 4 360 0.0 T 22-04-2016 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 8.5E-26 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 Pfam PF05193 Peptidase M16 inactive domain 648 822 3.6E-9 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 SUPERFAMILY SSF63411 703 909 3.84E-45 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2206 4ae0fb3588d18a01fc4c0b454f32cc35 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 6.2E-82 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 Pfam PF00813 FliP family 92 283 1.3E-78 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PANTHER PTHR30587 76 289 1.8E-121 T 22-04-2016 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 7.7E-82 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PANTHER PTHR30587:SF0 76 289 1.8E-121 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VP2239 f0949965750633d9fcb97feaa7d4d1e4 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VP0048 02ed99a27506b40e4784ccffe52abdca 517 Gene3D G3DSA:3.10.105.10 285 486 9.7E-55 T 22-04-2016 VP0048 02ed99a27506b40e4784ccffe52abdca 517 SUPERFAMILY SSF53850 26 516 3.62E-129 T 22-04-2016 VP0048 02ed99a27506b40e4784ccffe52abdca 517 Gene3D G3DSA:3.40.190.10 124 284 2.4E-40 T 22-04-2016 VP0048 02ed99a27506b40e4784ccffe52abdca 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site VP0048 02ed99a27506b40e4784ccffe52abdca 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 2.2E-86 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VP0048 02ed99a27506b40e4784ccffe52abdca 517 PANTHER PTHR30290:SF24 26 514 1.1E-180 T 22-04-2016 VP0048 02ed99a27506b40e4784ccffe52abdca 517 PANTHER PTHR30290 26 514 1.1E-180 T 22-04-2016 VP0048 02ed99a27506b40e4784ccffe52abdca 517 PIRSF PIRSF002741 21 512 3.2E-93 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VP0848 8f8e23908bd7998d7415508743d6a583 401 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 3.5E-188 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 VP0848 8f8e23908bd7998d7415508743d6a583 401 Gene3D G3DSA:3.30.559.10 161 399 4.3E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VP0848 8f8e23908bd7998d7415508743d6a583 401 PANTHER PTHR23151:SF47 3 401 7.0E-247 T 22-04-2016 VP0848 8f8e23908bd7998d7415508743d6a583 401 SUPERFAMILY SSF47005 106 150 4.58E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VP0848 8f8e23908bd7998d7415508743d6a583 401 Pfam PF02817 e3 binding domain 113 146 6.6E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VP0848 8f8e23908bd7998d7415508743d6a583 401 Gene3D G3DSA:2.40.50.100 1 96 1.4E-25 T 22-04-2016 VP0848 8f8e23908bd7998d7415508743d6a583 401 SUPERFAMILY SSF52777 171 400 3.11E-90 T 22-04-2016 VP0848 8f8e23908bd7998d7415508743d6a583 401 PANTHER PTHR23151 3 401 7.0E-247 T 22-04-2016 VP0848 8f8e23908bd7998d7415508743d6a583 401 Gene3D G3DSA:4.10.320.10 113 153 2.7E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VP0848 8f8e23908bd7998d7415508743d6a583 401 Pfam PF00364 Biotin-requiring enzyme 4 76 2.1E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VP0848 8f8e23908bd7998d7415508743d6a583 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VP0848 8f8e23908bd7998d7415508743d6a583 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 2.9E-82 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VP0848 8f8e23908bd7998d7415508743d6a583 401 SUPERFAMILY SSF51230 1 95 4.19E-24 T 22-04-2016 IPR011053 Single hybrid motif VP0598 be3cd9aed86d91ba2c3280337128693b 107 Gene3D G3DSA:2.60.300.12 2 97 2.5E-36 T 22-04-2016 IPR000361 FeS cluster biogenesis VP0598 be3cd9aed86d91ba2c3280337128693b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VP0598 be3cd9aed86d91ba2c3280337128693b 107 SUPERFAMILY SSF89360 1 96 1.01E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis VP0598 be3cd9aed86d91ba2c3280337128693b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.9E-57 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 VP0598 be3cd9aed86d91ba2c3280337128693b 107 PANTHER PTHR10072 1 107 3.8E-53 T 22-04-2016 VP0598 be3cd9aed86d91ba2c3280337128693b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.9E-38 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VP0598 be3cd9aed86d91ba2c3280337128693b 107 PANTHER PTHR10072:SF48 1 107 3.8E-53 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 VP0598 be3cd9aed86d91ba2c3280337128693b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.0E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis VP2679 291ae5e7b7adf119336e9b18ac1b07f6 250 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 211 1.4E-57 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2679 291ae5e7b7adf119336e9b18ac1b07f6 250 PANTHER PTHR11079 3 242 6.3E-73 T 22-04-2016 VP2679 291ae5e7b7adf119336e9b18ac1b07f6 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2679 291ae5e7b7adf119336e9b18ac1b07f6 250 SUPERFAMILY SSF55120 8 221 3.52E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2679 291ae5e7b7adf119336e9b18ac1b07f6 250 Pfam PF00849 RNA pseudouridylate synthase 22 174 2.3E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2679 291ae5e7b7adf119336e9b18ac1b07f6 250 PANTHER PTHR11079:SF86 3 242 6.3E-73 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 2.0E-150 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.2E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.9E-41 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.9E-41 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.9E-41 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.9E-41 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.9E-41 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 152 271 6.6E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 7 149 1.7E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 272 341 1.7E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 SUPERFAMILY SSF51905 3 337 2.67E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 SUPERFAMILY SSF55424 343 466 1.17E-38 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PANTHER PTHR22912:SF160 1 459 5.3E-268 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PANTHER PTHR22912 1 459 5.3E-268 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PIRSF PIRSF000350 1 468 1.5E-82 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.30.390.30 342 460 2.2E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 22-04-2016 VP2517 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 22-04-2016 VP2890 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751:SF406 482 490 7.6E-251 T 22-04-2016 VP2890 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751:SF406 510 630 7.6E-251 T 22-04-2016 VP2890 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751:SF406 131 459 7.6E-251 T 22-04-2016 VP2890 43a38a507f79df15ee5237d69e115783 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 3.2E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VP2890 43a38a507f79df15ee5237d69e115783 711 SUPERFAMILY SSF53383 130 562 3.02E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP2890 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.40.640.10 130 423 3.8E-100 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP2890 43a38a507f79df15ee5237d69e115783 711 SUPERFAMILY SSF55904 568 708 4.45E-43 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VP2890 43a38a507f79df15ee5237d69e115783 711 PIRSF PIRSF009393 1 711 7.3E-289 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VP2890 43a38a507f79df15ee5237d69e115783 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VP2890 43a38a507f79df15ee5237d69e115783 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.6E-189 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VP2890 43a38a507f79df15ee5237d69e115783 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VP2890 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.90.100.10 588 709 8.5E-38 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VP2890 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.90.1150.10 425 587 1.7E-66 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2890 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751 482 490 7.6E-251 T 22-04-2016 VP2890 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751 510 630 7.6E-251 T 22-04-2016 VP2890 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751 131 459 7.6E-251 T 22-04-2016 VP2467 66547058e1fa1b3a2bc02c41ad28ef0c 337 Gene3D G3DSA:2.40.160.10 22 337 1.5E-57 T 22-04-2016 IPR023614 Porin domain VP2467 66547058e1fa1b3a2bc02c41ad28ef0c 337 PANTHER PTHR34501:SF2 2 337 4.9E-87 T 22-04-2016 VP2467 66547058e1fa1b3a2bc02c41ad28ef0c 337 Pfam PF13609 Gram-negative porin 10 302 1.2E-26 T 22-04-2016 VP2467 66547058e1fa1b3a2bc02c41ad28ef0c 337 PANTHER PTHR34501 2 337 4.9E-87 T 22-04-2016 VP2467 66547058e1fa1b3a2bc02c41ad28ef0c 337 SUPERFAMILY SSF56935 22 337 3.66E-52 T 22-04-2016 VP3053 96c7bd0a4578b8120316ec94eabacccf 328 PANTHER PTHR39573:SF1 2 328 1.4E-178 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VP3053 96c7bd0a4578b8120316ec94eabacccf 328 SUPERFAMILY SSF56112 5 328 8.02E-91 T 22-04-2016 IPR011009 Protein kinase-like domain VP3053 96c7bd0a4578b8120316ec94eabacccf 328 Gene3D G3DSA:3.30.200.20 37 106 1.1E-4 T 22-04-2016 VP3053 96c7bd0a4578b8120316ec94eabacccf 328 Gene3D G3DSA:3.90.1200.10 107 326 3.6E-46 T 22-04-2016 VP3053 96c7bd0a4578b8120316ec94eabacccf 328 PANTHER PTHR39573 2 328 1.4E-178 T 22-04-2016 VP3053 96c7bd0a4578b8120316ec94eabacccf 328 Pfam PF01636 Phosphotransferase enzyme family 35 256 1.3E-41 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase VP3053 96c7bd0a4578b8120316ec94eabacccf 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.817 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VP1088 63c39a6d684d6e6425b8752abb0a9501 545 PANTHER PTHR32089 179 545 3.4E-118 T 22-04-2016 VP1088 63c39a6d684d6e6425b8752abb0a9501 545 SUPERFAMILY SSF58104 236 545 8.89E-76 T 22-04-2016 VP1088 63c39a6d684d6e6425b8752abb0a9501 545 Pfam PF00672 HAMP domain 197 264 2.1E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1088 63c39a6d684d6e6425b8752abb0a9501 545 Gene3D G3DSA:1.10.287.950 298 512 4.8E-55 T 22-04-2016 VP1088 63c39a6d684d6e6425b8752abb0a9501 545 SMART SM00304 303 356 53.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1088 63c39a6d684d6e6425b8752abb0a9501 545 SMART SM00304 214 268 1.8E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1088 63c39a6d684d6e6425b8752abb0a9501 545 SMART SM00283 283 544 5.8E-75 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1088 63c39a6d684d6e6425b8752abb0a9501 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 543 3.8E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1219 fff8e9f554ea8562052b92766b27196d 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 204 244 7.4E-11 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VP1219 fff8e9f554ea8562052b92766b27196d 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 251 286 9.3E-12 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VP1219 fff8e9f554ea8562052b92766b27196d 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 90 147 3.8E-7 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VP1219 fff8e9f554ea8562052b92766b27196d 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 161 193 2.8E-5 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VP1219 fff8e9f554ea8562052b92766b27196d 326 PANTHER PTHR35038 38 319 5.3E-57 T 22-04-2016 VP1219 fff8e9f554ea8562052b92766b27196d 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 251 286 2.9E-11 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VP1219 fff8e9f554ea8562052b92766b27196d 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 211 243 5.6E-7 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VP1219 fff8e9f554ea8562052b92766b27196d 326 PANTHER PTHR35038:SF3 38 319 5.3E-57 T 22-04-2016 VP1219 fff8e9f554ea8562052b92766b27196d 326 Gene3D G3DSA:1.10.710.10 52 176 3.8E-16 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VP1219 fff8e9f554ea8562052b92766b27196d 326 SUPERFAMILY SSF48695 61 310 5.54E-50 T 22-04-2016 IPR011031 Multihaem cytochrome VP1219 fff8e9f554ea8562052b92766b27196d 326 Gene3D G3DSA:1.10.3820.10 177 311 4.0E-18 T 22-04-2016 VP1219 fff8e9f554ea8562052b92766b27196d 326 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 59 319 6.4E-100 T 22-04-2016 IPR020015 Decaheme cytochrome, c-type, DmsE VP1634 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Pfam PF02321 Outer membrane efflux protein 233 416 1.7E-30 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP1634 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Pfam PF02321 Outer membrane efflux protein 24 212 3.6E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP1634 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 1.5E-120 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VP1634 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 SUPERFAMILY SSF56954 23 430 5.36E-88 T 22-04-2016 VP1634 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 PANTHER PTHR30026:SF4 11 436 3.9E-104 T 22-04-2016 VP1634 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Gene3D G3DSA:1.20.1600.10 22 420 7.1E-66 T 22-04-2016 VP1634 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 PANTHER PTHR30026 11 436 3.9E-104 T 22-04-2016 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 PANTHER PTHR22749:SF0 1 308 3.2E-144 T 22-04-2016 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 4.9E-108 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Pfam PF01687 Riboflavin kinase 184 306 7.2E-39 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SMART SM00904 183 307 9.5E-64 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Gene3D G3DSA:3.40.50.620 1 179 1.4E-68 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Pfam PF06574 FAD synthetase 13 167 2.0E-59 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 PIRSF PIRSF004491 1 311 2.8E-107 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Gene3D G3DSA:2.40.30.30 180 308 3.2E-40 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SUPERFAMILY SSF82114 174 309 3.49E-45 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 PANTHER PTHR22749 1 308 3.2E-144 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 56 1.8E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VP0533 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SUPERFAMILY SSF52374 16 175 2.67E-36 T 22-04-2016 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 Gene3D G3DSA:3.20.20.140 100 117 7.3E-19 T 22-04-2016 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 Gene3D G3DSA:3.20.20.140 247 528 7.3E-19 T 22-04-2016 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 SUPERFAMILY SSF51338 36 98 1.16E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 SUPERFAMILY SSF51338 537 579 1.16E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 PANTHER PTHR22642:SF2 36 581 6.8E-141 T 22-04-2016 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 Pfam PF07969 Amidohydrolase family 86 578 3.6E-130 T 22-04-2016 IPR013108 Amidohydrolase 3 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 PANTHER PTHR22642 36 581 6.8E-141 T 22-04-2016 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 SUPERFAMILY SSF51556 245 538 4.99E-22 T 22-04-2016 IPR032466 Metal-dependent hydrolase VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 SUPERFAMILY SSF51556 97 123 4.99E-22 T 22-04-2016 IPR032466 Metal-dependent hydrolase VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 Gene3D G3DSA:2.30.40.10 537 580 2.5E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP0628 a1a3426457aef7b5a79eb2671bbb3615 581 Gene3D G3DSA:2.30.40.10 37 99 2.5E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP2350 c685fa5e181f6217b2e906a8f7177593 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.4E-204 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VP2350 c685fa5e181f6217b2e906a8f7177593 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 4.1E-108 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VP2350 c685fa5e181f6217b2e906a8f7177593 414 PANTHER PTHR30578 3 414 8.9E-261 T 22-04-2016 VP2350 c685fa5e181f6217b2e906a8f7177593 414 PANTHER PTHR30578:SF1 3 414 8.9E-261 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VP2350 c685fa5e181f6217b2e906a8f7177593 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.536 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VP2350 c685fa5e181f6217b2e906a8f7177593 414 PIRSF PIRSF016055 1 414 1.6E-200 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VP1401 6eed9060dbeb7d777daceb140b08c741 524 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 2.5E-26 T 22-04-2016 IPR010657 ImpA, N-terminal VP1401 6eed9060dbeb7d777daceb140b08c741 524 PANTHER PTHR37024 1 510 1.8E-38 T 22-04-2016 VP1401 6eed9060dbeb7d777daceb140b08c741 524 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 6 497 7.7E-79 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 VP1401 6eed9060dbeb7d777daceb140b08c741 524 PANTHER PTHR37024:SF1 1 510 1.8E-38 T 22-04-2016 VP1401 6eed9060dbeb7d777daceb140b08c741 524 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 246 497 2.0E-69 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Gene3D G3DSA:3.90.1150.10 284 415 5.3E-55 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 SUPERFAMILY SSF53383 6 415 3.85E-185 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Gene3D G3DSA:3.40.640.10 37 283 4.7E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.536 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 PANTHER PTHR11680 1 415 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 PIRSF PIRSF000412 1 416 2.1E-169 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 1.9E-183 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VP0715 66f042aa00b4d52c14ba96ad8bcbb4a1 416 PANTHER PTHR11680:SF9 1 415 0.0 T 22-04-2016 VP1224 bef5fc9e33563694748fa16f9e1af448 458 Pfam PF01554 MatE 252 413 5.2E-20 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1224 bef5fc9e33563694748fa16f9e1af448 458 Pfam PF01554 MatE 25 185 4.4E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1224 bef5fc9e33563694748fa16f9e1af448 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 423 4.3E-60 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1224 bef5fc9e33563694748fa16f9e1af448 458 PANTHER PTHR11206:SF146 15 457 6.7E-210 T 22-04-2016 VP1224 bef5fc9e33563694748fa16f9e1af448 458 PANTHER PTHR11206 15 457 6.7E-210 T 22-04-2016 VP1224 bef5fc9e33563694748fa16f9e1af448 458 PIRSF PIRSF006603 10 458 2.2E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2658 80471aea24c4fd89b7b616acfda1e18e 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 1.5E-122 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VP2658 80471aea24c4fd89b7b616acfda1e18e 418 PANTHER PTHR21090 1 418 1.2E-210 T 22-04-2016 VP2658 80471aea24c4fd89b7b616acfda1e18e 418 Gene3D G3DSA:3.65.10.10 22 220 7.8E-71 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VP2658 80471aea24c4fd89b7b616acfda1e18e 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 4.0E-182 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2658 80471aea24c4fd89b7b616acfda1e18e 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.798 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2658 80471aea24c4fd89b7b616acfda1e18e 418 SUPERFAMILY SSF55205 6 417 1.8E-141 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VP2658 80471aea24c4fd89b7b616acfda1e18e 418 Gene3D G3DSA:3.65.10.10 221 417 7.8E-58 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VP2563 00d61982848362ede7e6a580162425da 263 SUPERFAMILY SSF101386 138 237 1.01E-23 T 22-04-2016 VP2563 00d61982848362ede7e6a580162425da 263 SUPERFAMILY SSF101386 3 105 5.52E-25 T 22-04-2016 VP2563 00d61982848362ede7e6a580162425da 263 PANTHER PTHR30522:SF0 5 263 1.2E-122 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VP2563 00d61982848362ede7e6a580162425da 263 PANTHER PTHR30522 5 263 1.2E-122 T 22-04-2016 VP2563 00d61982848362ede7e6a580162425da 263 Gene3D G3DSA:1.10.287.1080 134 222 3.0E-13 T 22-04-2016 VP2563 00d61982848362ede7e6a580162425da 263 Gene3D G3DSA:1.10.287.1080 7 73 1.7E-8 T 22-04-2016 VP2563 00d61982848362ede7e6a580162425da 263 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 1.3E-102 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VP2563 00d61982848362ede7e6a580162425da 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 233 6.9E-6 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VP2563 00d61982848362ede7e6a580162425da 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 3.1E-28 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VP2477 3836e25180bb7892230f47b1db0a7f62 341 Pfam PF05175 Methyltransferase small domain 172 336 2.3E-61 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VP2477 3836e25180bb7892230f47b1db0a7f62 341 Gene3D G3DSA:3.40.50.150 168 335 3.1E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2477 3836e25180bb7892230f47b1db0a7f62 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 5.7E-57 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP2477 3836e25180bb7892230f47b1db0a7f62 341 PANTHER PTHR18895:SF70 78 336 1.7E-109 T 22-04-2016 VP2477 3836e25180bb7892230f47b1db0a7f62 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.521 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP2477 3836e25180bb7892230f47b1db0a7f62 341 SUPERFAMILY SSF53335 152 332 1.59E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2477 3836e25180bb7892230f47b1db0a7f62 341 PANTHER PTHR18895 78 336 1.7E-109 T 22-04-2016 VP2477 3836e25180bb7892230f47b1db0a7f62 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 Gene3D G3DSA:3.40.50.360 1 168 1.3E-59 T 22-04-2016 IPR029039 Flavoprotein-like domain VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 PIRSF PIRSF038996 1 171 3.2E-59 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 2.4E-69 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 Pfam PF00258 Flavodoxin 5 160 2.4E-28 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 PANTHER PTHR19384:SF73 1 119 2.8E-79 T 22-04-2016 VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 PANTHER PTHR19384:SF73 141 167 2.8E-79 T 22-04-2016 VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 SUPERFAMILY SSF52218 1 167 9.56E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 PANTHER PTHR19384 1 119 2.8E-79 T 22-04-2016 VP0508 c5fe342e5bc3b7db22e7559bd294868a 172 PANTHER PTHR19384 141 167 2.8E-79 T 22-04-2016 VP2887 99d6a843a398d4930d82802599b67403 521 SUPERFAMILY SSF52540 3 246 1.75E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2887 99d6a843a398d4930d82802599b67403 521 Gene3D G3DSA:3.40.50.300 320 507 2.6E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2887 99d6a843a398d4930d82802599b67403 521 Gene3D G3DSA:3.40.50.300 2 276 1.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2887 99d6a843a398d4930d82802599b67403 521 PANTHER PTHR19211:SF65 1 507 3.1E-208 T 22-04-2016 VP2887 99d6a843a398d4930d82802599b67403 521 SMART SM00382 345 512 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2887 99d6a843a398d4930d82802599b67403 521 SMART SM00382 28 235 2.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2887 99d6a843a398d4930d82802599b67403 521 PANTHER PTHR19211 1 507 3.1E-208 T 22-04-2016 VP2887 99d6a843a398d4930d82802599b67403 521 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2887 99d6a843a398d4930d82802599b67403 521 Pfam PF12848 ABC transporter 228 304 1.2E-17 T 22-04-2016 IPR032781 ABC-transporter extension domain VP2887 99d6a843a398d4930d82802599b67403 521 SUPERFAMILY SSF52540 333 507 2.08E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2887 99d6a843a398d4930d82802599b67403 521 Pfam PF00005 ABC transporter 337 465 2.3E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2887 99d6a843a398d4930d82802599b67403 521 Pfam PF00005 ABC transporter 23 188 6.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0949 f6397901ab655dc4ae9474266a27bf9f 286 Pfam PF13622 Thioesterase-like superfamily 33 282 2.2E-61 T 22-04-2016 VP0949 f6397901ab655dc4ae9474266a27bf9f 286 PANTHER PTHR11066 5 286 7.8E-118 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VP0949 f6397901ab655dc4ae9474266a27bf9f 286 PANTHER PTHR11066:SF34 5 286 7.8E-118 T 22-04-2016 VP0949 f6397901ab655dc4ae9474266a27bf9f 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 9.2E-96 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VP0949 f6397901ab655dc4ae9474266a27bf9f 286 SUPERFAMILY SSF54637 116 283 1.18E-59 T 22-04-2016 IPR029069 HotDog domain VP0949 f6397901ab655dc4ae9474266a27bf9f 286 Gene3D G3DSA:3.10.129.10 4 115 1.9E-46 T 22-04-2016 IPR029069 HotDog domain VP0949 f6397901ab655dc4ae9474266a27bf9f 286 SUPERFAMILY SSF54637 6 114 2.13E-39 T 22-04-2016 IPR029069 HotDog domain VP0949 f6397901ab655dc4ae9474266a27bf9f 286 Gene3D G3DSA:3.10.129.10 125 285 2.2E-59 T 22-04-2016 IPR029069 HotDog domain VP3035 c512c83d345a272412c3123dbc1a3a98 185 Pfam PF01300 Telomere recombination 10 185 1.3E-49 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VP3035 c512c83d345a272412c3123dbc1a3a98 185 Gene3D G3DSA:3.90.870.10 2 185 2.1E-59 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VP3035 c512c83d345a272412c3123dbc1a3a98 185 PANTHER PTHR17490 2 180 4.3E-104 T 22-04-2016 VP3035 c512c83d345a272412c3123dbc1a3a98 185 SUPERFAMILY SSF55821 2 182 2.78E-58 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VP3035 c512c83d345a272412c3123dbc1a3a98 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 3.0E-39 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VP3035 c512c83d345a272412c3123dbc1a3a98 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.017 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VP3035 c512c83d345a272412c3123dbc1a3a98 185 PANTHER PTHR17490:SF8 2 180 4.3E-104 T 22-04-2016 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 2.0E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Pfam PF00667 FAD binding domain 256 448 6.9E-28 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Gene3D G3DSA:3.40.50.80 479 622 1.5E-61 T 22-04-2016 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PANTHER PTHR19384 86 623 3.5E-208 T 22-04-2016 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Gene3D G3DSA:3.40.50.360 82 232 4.5E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PANTHER PTHR19384:SF76 86 623 3.5E-208 T 22-04-2016 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 SUPERFAMILY SSF63380 252 469 7.29E-62 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 1.5E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 1.5E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 1.5E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 1.5E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 1.5E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 1.5E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 452 1.5E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 1.5E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00369 Flavodoxin signature 88 101 7.8E-10 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00369 Flavodoxin signature 168 178 7.8E-10 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00369 Flavodoxin signature 192 211 7.8E-10 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PRINTS PR00369 Flavodoxin signature 136 147 7.8E-10 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 623 49.21 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Pfam PF00258 Flavodoxin 89 220 4.0E-29 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Gene3D G3DSA:2.40.30.10 408 478 1.5E-40 T 22-04-2016 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Gene3D G3DSA:2.40.30.10 252 304 1.5E-40 T 22-04-2016 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 Gene3D G3DSA:1.20.990.10 305 407 1.3E-32 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 PIRSF PIRSF000207 20 623 7.0E-281 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 623 4.5E-256 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VP2722 ea56825e7e589c8218e3ce5da30bd976 623 SUPERFAMILY SSF52218 86 233 3.24E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2722 ea56825e7e589c8218e3ce5da30bd976 623 SUPERFAMILY SSF52343 468 623 1.02E-50 T 22-04-2016 VP2345 9fa2d320eb32074c74dfa13668c52538 334 PANTHER PTHR30040:SF3 4 334 3.6E-180 T 22-04-2016 VP2345 9fa2d320eb32074c74dfa13668c52538 334 PANTHER PTHR30040 4 334 3.6E-180 T 22-04-2016 VP2345 9fa2d320eb32074c74dfa13668c52538 334 Pfam PF02424 ApbE family 31 310 2.5E-86 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VP2345 9fa2d320eb32074c74dfa13668c52538 334 PIRSF PIRSF006268 1 334 5.3E-94 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VP2345 9fa2d320eb32074c74dfa13668c52538 334 SUPERFAMILY SSF143631 24 332 4.71E-101 T 22-04-2016 IPR003374 ApbE-like domain VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 Gene3D G3DSA:1.10.10.10 4 84 6.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 SUPERFAMILY SSF53850 94 295 4.71E-22 T 22-04-2016 VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 PANTHER PTHR30579:SF2 1 296 2.4E-133 T 22-04-2016 VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 PANTHER PTHR30579 1 296 2.4E-133 T 22-04-2016 VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 2.1E-105 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 2.9E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.654 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 SUPERFAMILY SSF46785 4 112 8.5E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 Pfam PF03466 LysR substrate binding domain 95 277 6.5E-15 T 22-04-2016 IPR005119 LysR, substrate-binding VP2595 aabc01f818de8f89ab7132b5b5dc009e 298 Gene3D G3DSA:3.40.190.10 92 198 5.1E-38 T 22-04-2016 VP1148 dea90db3d260cdaeed2e248fdb0ee433 242 SUPERFAMILY SSF56300 1 223 7.6E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1148 dea90db3d260cdaeed2e248fdb0ee433 242 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 122.766 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VP1148 dea90db3d260cdaeed2e248fdb0ee433 242 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.0E-104 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VP1148 dea90db3d260cdaeed2e248fdb0ee433 242 Gene3D G3DSA:3.60.21.10 1 125 9.6E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1148 dea90db3d260cdaeed2e248fdb0ee433 242 Gene3D G3DSA:3.60.21.10 173 211 9.6E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1148 dea90db3d260cdaeed2e248fdb0ee433 242 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.8E-7 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VP1148 dea90db3d260cdaeed2e248fdb0ee433 242 PANTHER PTHR34990:SF1 1 242 6.2E-113 T 22-04-2016 VP1148 dea90db3d260cdaeed2e248fdb0ee433 242 PANTHER PTHR34990 1 242 6.2E-113 T 22-04-2016 VP2326 a8773241d069147ad6132a78619df7b7 168 Pfam PF13302 Acetyltransferase (GNAT) domain 30 139 1.3E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2326 a8773241d069147ad6132a78619df7b7 168 PANTHER PTHR13256:SF10 1 146 1.4E-26 T 22-04-2016 VP2326 a8773241d069147ad6132a78619df7b7 168 Gene3D G3DSA:3.40.630.30 3 151 2.3E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2326 a8773241d069147ad6132a78619df7b7 168 SUPERFAMILY SSF55729 3 146 4.37E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2326 a8773241d069147ad6132a78619df7b7 168 PANTHER PTHR13256 1 146 1.4E-26 T 22-04-2016 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 SMART SM00228 374 447 4.8E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 SMART SM00228 267 349 1.9E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 Pfam PF13180 PDZ domain 268 358 3.4E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 SUPERFAMILY SSF50494 14 58 4.48E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 SUPERFAMILY SSF50494 89 276 4.48E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 SUPERFAMILY SSF50156 379 454 1.58E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 4.6E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 Gene3D G3DSA:2.30.42.10 388 454 2.6E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 Gene3D G3DSA:2.30.42.10 270 362 4.8E-30 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 PANTHER PTHR22939:SF101 1 382 6.7E-201 T 22-04-2016 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 Gene3D G3DSA:2.40.10.10 156 269 4.4E-44 T 22-04-2016 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 PANTHER PTHR22939 1 382 6.7E-201 T 22-04-2016 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 4.0E-32 T 22-04-2016 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 1.8E-164 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 Gene3D G3DSA:2.40.10.10 37 155 7.8E-35 T 22-04-2016 VP0433 35a0d46ac2da01e53f4adeae7f20f675 455 SUPERFAMILY SSF50156 233 350 4.66E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP3058 165761d33a992c3b5cdd14017eb34b45 548 PANTHER PTHR18968 1 546 2.1E-257 T 22-04-2016 VP3058 165761d33a992c3b5cdd14017eb34b45 548 Gene3D G3DSA:3.40.50.1220 184 338 1.9E-54 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP3058 165761d33a992c3b5cdd14017eb34b45 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VP3058 165761d33a992c3b5cdd14017eb34b45 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 2.7E-210 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP3058 165761d33a992c3b5cdd14017eb34b45 548 SUPERFAMILY SSF52518 358 545 1.23E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP3058 165761d33a992c3b5cdd14017eb34b45 548 Gene3D G3DSA:3.40.50.970 345 546 1.4E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP3058 165761d33a992c3b5cdd14017eb34b45 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 2.3E-40 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VP3058 165761d33a992c3b5cdd14017eb34b45 548 PANTHER PTHR18968:SF116 1 546 2.1E-257 T 22-04-2016 VP3058 165761d33a992c3b5cdd14017eb34b45 548 SUPERFAMILY SSF52518 1 176 1.23E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP3058 165761d33a992c3b5cdd14017eb34b45 548 SUPERFAMILY SSF52467 182 341 1.11E-55 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP3058 165761d33a992c3b5cdd14017eb34b45 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 2.7E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VP3058 165761d33a992c3b5cdd14017eb34b45 548 Gene3D G3DSA:3.40.50.970 1 173 9.0E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP3058 165761d33a992c3b5cdd14017eb34b45 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 3.1E-55 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VP1459 35551481865ddc281c323a2e4af729e5 412 PANTHER PTHR22916 73 368 1.4E-14 T 22-04-2016 VP1459 35551481865ddc281c323a2e4af729e5 412 Gene3D G3DSA:3.90.550.10 74 306 1.1E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1459 35551481865ddc281c323a2e4af729e5 412 SUPERFAMILY SSF53448 64 342 2.63E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1459 35551481865ddc281c323a2e4af729e5 412 Pfam PF13641 Glycosyltransferase like family 2 74 294 1.1E-20 T 22-04-2016 VP0115 900137640810ca4a572a2f820e83ab5e 463 PIRSF PIRSF000167 9 460 1.6E-173 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VP0115 900137640810ca4a572a2f820e83ab5e 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 4.6E-207 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VP0115 900137640810ca4a572a2f820e83ab5e 463 Pfam PF04055 Radical SAM superfamily 63 234 3.4E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP0115 900137640810ca4a572a2f820e83ab5e 463 PANTHER PTHR13932 5 457 4.6E-263 T 22-04-2016 VP0115 900137640810ca4a572a2f820e83ab5e 463 PANTHER PTHR13932:SF6 5 457 4.6E-263 T 22-04-2016 VP0115 900137640810ca4a572a2f820e83ab5e 463 Gene3D G3DSA:3.80.30.20 59 289 1.5E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VP0115 900137640810ca4a572a2f820e83ab5e 463 Pfam PF06969 HemN C-terminal domain 369 437 1.4E-11 T 22-04-2016 IPR010723 HemN, C-terminal VP0115 900137640810ca4a572a2f820e83ab5e 463 SMART SM00729 58 278 1.1E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VP0115 900137640810ca4a572a2f820e83ab5e 463 SUPERFAMILY SSF102114 12 450 5.49E-145 T 22-04-2016 VP2435 935c1ec4ada677d08625af60f0ace723 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 4.3E-49 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VP2435 935c1ec4ada677d08625af60f0ace723 442 SMART SM00941 350 424 4.6E-28 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VP2435 935c1ec4ada677d08625af60f0ace723 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.5E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VP2435 935c1ec4ada677d08625af60f0ace723 442 PANTHER PTHR10515 5 441 5.0E-213 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VP2435 935c1ec4ada677d08625af60f0ace723 442 Gene3D G3DSA:1.20.970.10 2 67 1.8E-29 T 22-04-2016 VP2435 935c1ec4ada677d08625af60f0ace723 442 Gene3D G3DSA:3.40.1030.10 76 338 6.4E-109 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VP2435 935c1ec4ada677d08625af60f0ace723 442 Gene3D G3DSA:3.90.1170.30 339 432 1.7E-32 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VP2435 935c1ec4ada677d08625af60f0ace723 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 438 51.037 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VP2435 935c1ec4ada677d08625af60f0ace723 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 VP2435 935c1ec4ada677d08625af60f0ace723 442 PIRSF PIRSF000478 1 438 1.1E-148 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VP2435 935c1ec4ada677d08625af60f0ace723 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 3.4E-23 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VP2435 935c1ec4ada677d08625af60f0ace723 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 1.8E-213 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VP2435 935c1ec4ada677d08625af60f0ace723 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.8E-159 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VP2435 935c1ec4ada677d08625af60f0ace723 442 SUPERFAMILY SSF52418 73 334 9.68E-89 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VP2435 935c1ec4ada677d08625af60f0ace723 442 PANTHER PTHR10515:SF0 5 441 5.0E-213 T 22-04-2016 VP2435 935c1ec4ada677d08625af60f0ace723 442 SUPERFAMILY SSF54680 337 437 1.31E-28 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VP2435 935c1ec4ada677d08625af60f0ace723 442 SUPERFAMILY SSF47648 2 70 1.14E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VPA0438 470bc87750f75c2d6bf73360a40e2f18 53 SUPERFAMILY SSF53613 2 34 4.48E-5 T 22-04-2016 IPR029056 Ribokinase-like VPA0438 470bc87750f75c2d6bf73360a40e2f18 53 Gene3D G3DSA:3.40.1190.20 2 40 5.8E-6 T 22-04-2016 IPR029056 Ribokinase-like VP2366 2ca82d0eb3488f52dd7780034f659a41 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 296 3.4E-43 T 22-04-2016 IPR000160 GGDEF domain VP2366 2ca82d0eb3488f52dd7780034f659a41 306 SMART SM00267 130 301 3.5E-50 T 22-04-2016 IPR000160 GGDEF domain VP2366 2ca82d0eb3488f52dd7780034f659a41 306 SUPERFAMILY SSF55073 146 302 4.55E-43 T 22-04-2016 IPR029787 Nucleotide cyclase VP2366 2ca82d0eb3488f52dd7780034f659a41 306 Gene3D G3DSA:3.30.450.20 6 116 1.3E-5 T 22-04-2016 VP2366 2ca82d0eb3488f52dd7780034f659a41 306 Gene3D G3DSA:3.30.70.270 143 305 1.9E-49 T 22-04-2016 VP2366 2ca82d0eb3488f52dd7780034f659a41 306 SUPERFAMILY SSF55785 5 84 9.0E-5 T 22-04-2016 IPR000014 PAS domain VP2366 2ca82d0eb3488f52dd7780034f659a41 306 PANTHER PTHR10799:SF750 174 299 1.3E-27 T 22-04-2016 VP2366 2ca82d0eb3488f52dd7780034f659a41 306 PANTHER PTHR10799:SF750 53 121 1.3E-27 T 22-04-2016 VP2366 2ca82d0eb3488f52dd7780034f659a41 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 299 1.5E-45 T 22-04-2016 IPR000160 GGDEF domain VP2366 2ca82d0eb3488f52dd7780034f659a41 306 PANTHER PTHR10799 174 299 1.3E-27 T 22-04-2016 VP2366 2ca82d0eb3488f52dd7780034f659a41 306 PANTHER PTHR10799 53 121 1.3E-27 T 22-04-2016 VP3016 7d2c6db97ccdf465d30bc29f4144758f 252 Pfam PF09836 Putative DNA-binding domain 6 93 1.1E-22 T 22-04-2016 IPR018640 Putative DNA-binding domain, bacteria VP2433 996424ef49340b8bc251e7c71a8472c2 239 Gene3D G3DSA:3.40.50.1580 10 233 8.6E-82 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP2433 996424ef49340b8bc251e7c71a8472c2 239 PANTHER PTHR21234 3 234 5.9E-83 T 22-04-2016 IPR018017 Nucleoside phosphorylase VP2433 996424ef49340b8bc251e7c71a8472c2 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VP2433 996424ef49340b8bc251e7c71a8472c2 239 Pfam PF01048 Phosphorylase superfamily 15 217 2.9E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP2433 996424ef49340b8bc251e7c71a8472c2 239 PANTHER PTHR21234:SF8 3 234 5.9E-83 T 22-04-2016 VP2433 996424ef49340b8bc251e7c71a8472c2 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.688 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VP2433 996424ef49340b8bc251e7c71a8472c2 239 SUPERFAMILY SSF53167 3 234 9.03E-93 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP2433 996424ef49340b8bc251e7c71a8472c2 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 4.5E-119 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 SUPERFAMILY SSF46785 1 83 8.74E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 SUPERFAMILY SSF53850 89 287 1.18E-37 T 22-04-2016 VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 PANTHER PTHR30537:SF19 1 290 5.6E-159 T 22-04-2016 VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:3.40.190.10 177 257 2.8E-15 T 22-04-2016 VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 Pfam PF03466 LysR substrate binding domain 88 286 1.3E-39 T 22-04-2016 IPR005119 LysR, substrate-binding VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:1.10.10.10 1 82 6.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.2E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 PANTHER PTHR30537 1 290 5.6E-159 T 22-04-2016 VP2184 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:3.40.190.10 91 176 1.7E-21 T 22-04-2016 VP2009 57c869606da10b3a1cf3f2c18986220c 203 SUPERFAMILY SSF52172 8 122 1.02E-29 T 22-04-2016 IPR011006 CheY-like superfamily VP2009 57c869606da10b3a1cf3f2c18986220c 203 SMART SM00421 139 196 1.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2009 57c869606da10b3a1cf3f2c18986220c 203 PANTHER PTHR26402 8 192 2.0E-67 T 22-04-2016 VP2009 57c869606da10b3a1cf3f2c18986220c 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 1.0E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2009 57c869606da10b3a1cf3f2c18986220c 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2009 57c869606da10b3a1cf3f2c18986220c 203 SUPERFAMILY SSF46894 129 197 6.46E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP2009 57c869606da10b3a1cf3f2c18986220c 203 SMART SM00448 8 119 3.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2009 57c869606da10b3a1cf3f2c18986220c 203 PANTHER PTHR26402:SF599 8 192 2.0E-67 T 22-04-2016 VP2009 57c869606da10b3a1cf3f2c18986220c 203 Gene3D G3DSA:1.10.10.10 144 196 2.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2009 57c869606da10b3a1cf3f2c18986220c 203 Gene3D G3DSA:3.40.50.2300 7 143 4.6E-30 T 22-04-2016 VP2009 57c869606da10b3a1cf3f2c18986220c 203 Pfam PF00072 Response regulator receiver domain 10 119 9.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2009 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2009 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2009 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2369 8217604598dd11ca556bda2d1697cf51 367 Pfam PF06725 3D domain 272 348 5.1E-21 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VP2369 8217604598dd11ca556bda2d1697cf51 367 PANTHER PTHR30124:SF0 5 365 5.6E-123 T 22-04-2016 VP2369 8217604598dd11ca556bda2d1697cf51 367 Gene3D G3DSA:2.40.40.10 68 157 1.0E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VP2369 8217604598dd11ca556bda2d1697cf51 367 Gene3D G3DSA:2.40.40.10 161 351 2.0E-42 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VP2369 8217604598dd11ca556bda2d1697cf51 367 SUPERFAMILY SSF50685 22 350 4.88E-101 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VP2369 8217604598dd11ca556bda2d1697cf51 367 PANTHER PTHR30124 5 365 5.6E-123 T 22-04-2016 VP2369 8217604598dd11ca556bda2d1697cf51 367 Pfam PF03562 MltA specific insert domain 69 251 7.9E-38 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VP2369 8217604598dd11ca556bda2d1697cf51 367 SMART SM00925 119 252 6.9E-66 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VP0616 fec23097dc841153339e9cf43a65a480 490 SUPERFAMILY SSF54631 96 205 1.77E-26 T 22-04-2016 VP0616 fec23097dc841153339e9cf43a65a480 490 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 297 309 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 VP0616 fec23097dc841153339e9cf43a65a480 490 PANTHER PTHR11911:SF6 2 283 2.1E-252 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VP0616 fec23097dc841153339e9cf43a65a480 490 PANTHER PTHR11911 2 283 2.1E-252 T 22-04-2016 VP0616 fec23097dc841153339e9cf43a65a480 490 PANTHER PTHR11911 301 487 2.1E-252 T 22-04-2016 VP0616 fec23097dc841153339e9cf43a65a480 490 SMART SM01240 9 475 0.0 T 22-04-2016 VP0616 fec23097dc841153339e9cf43a65a480 490 SMART SM00116 98 146 1.3E-12 T 22-04-2016 IPR000644 CBS domain VP0616 fec23097dc841153339e9cf43a65a480 490 SMART SM00116 160 208 5.6E-6 T 22-04-2016 IPR000644 CBS domain VP0616 fec23097dc841153339e9cf43a65a480 490 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 488 85.218 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VP0616 fec23097dc841153339e9cf43a65a480 490 PANTHER PTHR11911:SF6 301 487 2.1E-252 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VP0616 fec23097dc841153339e9cf43a65a480 490 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 475 3.5E-162 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 VP0616 fec23097dc841153339e9cf43a65a480 490 Pfam PF00571 CBS domain 151 203 1.1E-4 T 22-04-2016 IPR000644 CBS domain VP0616 fec23097dc841153339e9cf43a65a480 490 Pfam PF00571 CBS domain 97 142 4.6E-10 T 22-04-2016 IPR000644 CBS domain VP0616 fec23097dc841153339e9cf43a65a480 490 PIRSF PIRSF000130 2 490 1.1E-201 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VP0616 fec23097dc841153339e9cf43a65a480 490 SUPERFAMILY SSF51412 219 479 7.98E-126 T 22-04-2016 VP0616 fec23097dc841153339e9cf43a65a480 490 SUPERFAMILY SSF51412 3 92 7.98E-126 T 22-04-2016 VP0616 fec23097dc841153339e9cf43a65a480 490 Gene3D G3DSA:3.20.20.70 3 487 2.1E-199 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0616 fec23097dc841153339e9cf43a65a480 490 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 3.9E-197 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 SUPERFAMILY SSF46785 1 87 9.31E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:3.40.190.10 201 265 3.6E-11 T 22-04-2016 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 Pfam PF03466 LysR substrate binding domain 87 289 4.0E-34 T 22-04-2016 IPR005119 LysR, substrate-binding VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 SUPERFAMILY SSF53850 87 290 1.21E-28 T 22-04-2016 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:1.10.10.10 1 81 2.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.9E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 PANTHER PTHR30126 1 288 1.4E-166 T 22-04-2016 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 PANTHER PTHR30126:SF14 1 288 1.4E-166 T 22-04-2016 VP0034 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:3.40.190.10 82 200 4.5E-19 T 22-04-2016 VP2440 ed7cc28712fe8d693730997c7058ca94 529 PANTHER PTHR23115:SF69 1 184 4.5E-250 T 22-04-2016 VP2440 ed7cc28712fe8d693730997c7058ca94 529 PANTHER PTHR23115:SF69 251 472 4.5E-250 T 22-04-2016 VP2440 ed7cc28712fe8d693730997c7058ca94 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2440 ed7cc28712fe8d693730997c7058ca94 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2440 ed7cc28712fe8d693730997c7058ca94 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2440 ed7cc28712fe8d693730997c7058ca94 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2440 ed7cc28712fe8d693730997c7058ca94 529 SUPERFAMILY SSF50447 262 393 4.04E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2440 ed7cc28712fe8d693730997c7058ca94 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VP2440 ed7cc28712fe8d693730997c7058ca94 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 2.1E-300 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 VP2440 ed7cc28712fe8d693730997c7058ca94 529 PANTHER PTHR23115 1 184 4.5E-250 T 22-04-2016 VP2440 ed7cc28712fe8d693730997c7058ca94 529 PANTHER PTHR23115 251 472 4.5E-250 T 22-04-2016 VP2440 ed7cc28712fe8d693730997c7058ca94 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 4.6E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2440 ed7cc28712fe8d693730997c7058ca94 529 SUPERFAMILY SSF52540 10 277 4.12E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2440 ed7cc28712fe8d693730997c7058ca94 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VP2440 ed7cc28712fe8d693730997c7058ca94 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.86 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 VP2440 ed7cc28712fe8d693730997c7058ca94 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.9E-46 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal VP2440 ed7cc28712fe8d693730997c7058ca94 529 Gene3D G3DSA:2.40.30.10 293 394 3.1E-24 T 22-04-2016 VP2440 ed7cc28712fe8d693730997c7058ca94 529 Gene3D G3DSA:3.40.50.300 9 283 1.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2440 ed7cc28712fe8d693730997c7058ca94 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.0E-46 T 22-04-2016 VP2440 ed7cc28712fe8d693730997c7058ca94 529 Gene3D G3DSA:3.30.70.870 395 463 5.2E-14 T 22-04-2016 VP2440 ed7cc28712fe8d693730997c7058ca94 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 PANTHER PTHR13734 1 298 1.5E-77 T 22-04-2016 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 51.918 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 SUPERFAMILY SSF81301 2 119 1.42E-30 T 22-04-2016 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 Gene3D G3DSA:3.30.460.10 2 121 2.4E-31 T 22-04-2016 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 PIRSF PIRSF000813 1 406 7.6E-205 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 Pfam PF01966 HD domain 229 323 2.0E-8 T 22-04-2016 IPR006674 HD domain VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 Gene3D G3DSA:1.10.3090.10 122 355 1.1E-54 T 22-04-2016 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 SUPERFAMILY SSF81891 120 400 1.96E-53 T 22-04-2016 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 Pfam PF01743 Poly A polymerase head domain 3 122 1.9E-19 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.927 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VP0414 d8b915e85f9c2356cdc6dd173f4c5579 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.6E-13 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VP0204 faf01d9cdd6ef47a67ed46fcca18be9d 343 SUPERFAMILY SSF51735 7 164 3.66E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0204 faf01d9cdd6ef47a67ed46fcca18be9d 343 PANTHER PTHR22604 8 334 1.7E-29 T 22-04-2016 VP0204 faf01d9cdd6ef47a67ed46fcca18be9d 343 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 118 1.9E-11 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 VP0204 faf01d9cdd6ef47a67ed46fcca18be9d 343 Gene3D G3DSA:3.30.360.10 136 334 1.5E-17 T 22-04-2016 VP0204 faf01d9cdd6ef47a67ed46fcca18be9d 343 Gene3D G3DSA:3.40.50.720 6 135 3.2E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0204 faf01d9cdd6ef47a67ed46fcca18be9d 343 SUPERFAMILY SSF55347 129 293 2.62E-17 T 22-04-2016 VP1826 9aa043bfddf3030f3ea9ed43fdc95244 273 Gene3D G3DSA:3.30.870.10 134 265 2.7E-26 T 22-04-2016 VP1826 9aa043bfddf3030f3ea9ed43fdc95244 273 Pfam PF13091 PLD-like domain 140 263 9.4E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain VP1826 9aa043bfddf3030f3ea9ed43fdc95244 273 PANTHER PTHR21248 133 264 7.3E-22 T 22-04-2016 VP1826 9aa043bfddf3030f3ea9ed43fdc95244 273 SUPERFAMILY SSF56024 134 266 2.47E-23 T 22-04-2016 VP0098 3e08bbbbafa9e1e06f392625aabd8b29 81 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 25.252 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VP0098 3e08bbbbafa9e1e06f392625aabd8b29 81 PANTHER PTHR33162 1 81 4.3E-22 T 22-04-2016 VP0098 3e08bbbbafa9e1e06f392625aabd8b29 81 Pfam PF02416 mttA/Hcf106 family 4 55 6.6E-14 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VP0098 3e08bbbbafa9e1e06f392625aabd8b29 81 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.5E-21 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VP0155 904572ce771db18d1a609437f1f34817 430 PANTHER PTHR24423 163 428 1.8E-58 T 22-04-2016 VP0155 904572ce771db18d1a609437f1f34817 430 Gene3D G3DSA:3.30.565.10 285 429 7.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0155 904572ce771db18d1a609437f1f34817 430 Gene3D G3DSA:1.10.287.130 213 276 5.4E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0155 904572ce771db18d1a609437f1f34817 430 SMART SM00388 222 282 2.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0155 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0155 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF158472 171 219 7.06E-5 T 22-04-2016 VP0155 904572ce771db18d1a609437f1f34817 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 6.9E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0155 904572ce771db18d1a609437f1f34817 430 Pfam PF00672 HAMP domain 153 217 4.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0155 904572ce771db18d1a609437f1f34817 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0155 904572ce771db18d1a609437f1f34817 430 SMART SM00387 321 430 3.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0155 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF55874 285 429 3.14E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0155 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0155 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0155 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0155 904572ce771db18d1a609437f1f34817 430 SMART SM00304 169 221 9.5E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 22-04-2016 IPR000362 Fumarate lyase family VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 22-04-2016 IPR000362 Fumarate lyase family VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 22-04-2016 IPR000362 Fumarate lyase family VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 22-04-2016 IPR000362 Fumarate lyase family VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 9.6E-151 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.275.10 1 119 5.6E-49 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.40.30 391 446 4.5E-34 T 22-04-2016 VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 PANTHER PTHR11444:SF17 4 456 0.0 T 22-04-2016 VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 PANTHER PTHR11444 4 456 0.0 T 22-04-2016 IPR000362 Fumarate lyase family VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.20.200.10 120 390 6.4E-89 T 22-04-2016 VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 3.6E-52 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 SUPERFAMILY SSF48557 4 448 1.12E-108 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VP1128 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF00206 Lyase 14 313 2.0E-74 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VP2425 f11dab2c525a27b8e6137a61f3bc51d6 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 22-04-2016 IPR020845 AMP-binding, conserved site VP2425 f11dab2c525a27b8e6137a61f3bc51d6 568 PANTHER PTHR24096 17 562 2.5E-254 T 22-04-2016 VP2425 f11dab2c525a27b8e6137a61f3bc51d6 568 Pfam PF00501 AMP-binding enzyme 29 445 2.3E-87 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP2425 f11dab2c525a27b8e6137a61f3bc51d6 568 Gene3D G3DSA:2.30.38.10 373 435 9.5E-19 T 22-04-2016 VP2425 f11dab2c525a27b8e6137a61f3bc51d6 568 Gene3D G3DSA:3.40.50.980 24 193 1.3E-27 T 22-04-2016 VP2425 f11dab2c525a27b8e6137a61f3bc51d6 568 Gene3D G3DSA:3.40.50.980 194 372 5.0E-26 T 22-04-2016 VP2425 f11dab2c525a27b8e6137a61f3bc51d6 568 PANTHER PTHR24096:SF249 17 562 2.5E-254 T 22-04-2016 VP2425 f11dab2c525a27b8e6137a61f3bc51d6 568 SUPERFAMILY SSF56801 21 552 9.29E-110 T 22-04-2016 VP2287 3c5ff459068a7dd048fd0c7d620cc637 281 PANTHER PTHR11907 1 260 1.6E-127 T 22-04-2016 VP2287 3c5ff459068a7dd048fd0c7d620cc637 281 PANTHER PTHR11907:SF10 1 260 1.6E-127 T 22-04-2016 VP2287 3c5ff459068a7dd048fd0c7d620cc637 281 Gene3D G3DSA:3.60.20.10 1 253 1.6E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP2287 3c5ff459068a7dd048fd0c7d620cc637 281 Pfam PF13230 Glutamine amidotransferases class-II 1 260 1.6E-113 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 VP2287 3c5ff459068a7dd048fd0c7d620cc637 281 SUPERFAMILY SSF56235 2 253 2.83E-51 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 PANTHER PTHR18919:SF69 3 391 5.2E-207 T 22-04-2016 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 PIRSF PIRSF000429 2 391 5.1E-133 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 SUPERFAMILY SSF53901 4 263 7.81E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 SUPERFAMILY SSF53901 266 390 3.3E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.678 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 2.3E-142 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 147 187 4.1E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 272 390 4.1E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 188 271 3.8E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 8 130 3.8E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 1.6E-83 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.0E-243 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.3E-49 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 VP0029 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 PANTHER PTHR18919 3 391 5.2E-207 T 22-04-2016 VP2513 06a84f3e43502943c975443512a80dee 556 Pfam PF00916 Sulfate permease family 11 376 1.2E-85 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VP2513 06a84f3e43502943c975443512a80dee 556 Gene3D G3DSA:3.30.750.24 439 541 1.8E-8 T 22-04-2016 IPR002645 STAS domain VP2513 06a84f3e43502943c975443512a80dee 556 PANTHER PTHR11814:SF97 10 550 1.4E-300 T 22-04-2016 VP2513 06a84f3e43502943c975443512a80dee 556 Pfam PF01740 STAS domain 440 533 4.7E-12 T 22-04-2016 IPR002645 STAS domain VP2513 06a84f3e43502943c975443512a80dee 556 SUPERFAMILY SSF52091 439 541 1.37E-10 T 22-04-2016 IPR002645 STAS domain VP2513 06a84f3e43502943c975443512a80dee 556 PANTHER PTHR11814 10 550 1.4E-300 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VP1623 ec72b93790d06683acdfc3d158286df6 249 Gene3D G3DSA:3.40.50.300 7 243 2.5E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1623 ec72b93790d06683acdfc3d158286df6 249 SMART SM00382 33 220 3.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1623 ec72b93790d06683acdfc3d158286df6 249 SUPERFAMILY SSF52540 8 242 6.08E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1623 ec72b93790d06683acdfc3d158286df6 249 Pfam PF00005 ABC transporter 24 172 1.1E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1623 ec72b93790d06683acdfc3d158286df6 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1623 ec72b93790d06683acdfc3d158286df6 249 PANTHER PTHR24220:SF490 10 249 5.8E-193 T 22-04-2016 VP1623 ec72b93790d06683acdfc3d158286df6 249 PIRSF PIRSF039085 5 248 7.7E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VP1623 ec72b93790d06683acdfc3d158286df6 249 PANTHER PTHR24220 10 249 5.8E-193 T 22-04-2016 VP1606 4d7873125c07e06c43e0b6a740c95836 668 SMART SM00228 246 323 1.1E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP1606 4d7873125c07e06c43e0b6a740c95836 668 Gene3D G3DSA:2.30.42.10 252 335 5.8E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP1606 4d7873125c07e06c43e0b6a740c95836 668 Gene3D G3DSA:3.90.226.10 336 529 3.7E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP1606 4d7873125c07e06c43e0b6a740c95836 668 Gene3D G3DSA:3.90.226.10 641 663 3.7E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP1606 4d7873125c07e06c43e0b6a740c95836 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 1.5E-111 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VP1606 4d7873125c07e06c43e0b6a740c95836 668 SMART SM00245 326 527 1.9E-61 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VP1606 4d7873125c07e06c43e0b6a740c95836 668 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 3.1E-39 T 22-04-2016 IPR020992 Tail specific protease, C-terminal VP1606 4d7873125c07e06c43e0b6a740c95836 668 SUPERFAMILY SSF50156 244 322 1.95E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP1606 4d7873125c07e06c43e0b6a740c95836 668 PANTHER PTHR32060:SF11 7 600 3.2E-295 T 22-04-2016 VP1606 4d7873125c07e06c43e0b6a740c95836 668 PANTHER PTHR32060 7 600 3.2E-295 T 22-04-2016 VP1606 4d7873125c07e06c43e0b6a740c95836 668 SUPERFAMILY SSF52096 166 264 7.46E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP1606 4d7873125c07e06c43e0b6a740c95836 668 SUPERFAMILY SSF52096 350 531 7.46E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP1606 4d7873125c07e06c43e0b6a740c95836 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 1.3E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP1606 4d7873125c07e06c43e0b6a740c95836 668 Gene3D G3DSA:3.30.750.44 172 251 4.0E-5 T 22-04-2016 VP1606 4d7873125c07e06c43e0b6a740c95836 668 Pfam PF03572 Peptidase family S41 356 525 2.8E-51 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VP1606 4d7873125c07e06c43e0b6a740c95836 668 Pfam PF08180 B melanoma antigen family 9 36 5.8E-15 T 22-04-2016 IPR012530 B melanoma antigen VP0571 8734ec8a27ff01c4b1ed913c6c317b07 319 SUPERFAMILY SSF53850 38 316 4.59E-65 T 22-04-2016 VP0571 8734ec8a27ff01c4b1ed913c6c317b07 319 Gene3D G3DSA:3.40.190.10 120 262 1.1E-33 T 22-04-2016 VP0571 8734ec8a27ff01c4b1ed913c6c317b07 319 PANTHER PTHR30570 36 317 3.9E-156 T 22-04-2016 VP0571 8734ec8a27ff01c4b1ed913c6c317b07 319 Gene3D G3DSA:3.40.190.10 40 117 3.1E-5 T 22-04-2016 VP0571 8734ec8a27ff01c4b1ed913c6c317b07 319 Gene3D G3DSA:3.40.190.10 263 314 3.1E-5 T 22-04-2016 VP0571 8734ec8a27ff01c4b1ed913c6c317b07 319 PANTHER PTHR30570:SF5 36 317 3.9E-156 T 22-04-2016 VP0571 8734ec8a27ff01c4b1ed913c6c317b07 319 Pfam PF12849 PBP superfamily domain 34 291 2.4E-29 T 22-04-2016 IPR024370 PBP domain VP0571 8734ec8a27ff01c4b1ed913c6c317b07 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 8 305 4.5E-76 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 VP3041 935d3acfe2e992a6ee412280b45a887d 364 SMART SM00257 39 87 1.8E-4 T 22-04-2016 IPR018392 LysM domain VP3041 935d3acfe2e992a6ee412280b45a887d 364 PANTHER PTHR34700:SF2 1 353 1.2E-77 T 22-04-2016 VP3041 935d3acfe2e992a6ee412280b45a887d 364 Pfam PF01476 LysM domain 40 85 1.8E-11 T 22-04-2016 IPR018392 LysM domain VP3041 935d3acfe2e992a6ee412280b45a887d 364 SUPERFAMILY SSF54106 38 86 8.89E-7 T 22-04-2016 IPR018392 LysM domain VP3041 935d3acfe2e992a6ee412280b45a887d 364 Gene3D G3DSA:3.10.350.10 37 86 2.7E-7 T 22-04-2016 IPR018392 LysM domain VP3041 935d3acfe2e992a6ee412280b45a887d 364 PANTHER PTHR34700 1 353 1.2E-77 T 22-04-2016 VP1927 4d87526105d7d012a59d4b038f051cb9 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 2.3E-26 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1927 4d87526105d7d012a59d4b038f051cb9 228 Gene3D G3DSA:3.30.70.20 171 225 4.9E-36 T 22-04-2016 VP1927 4d87526105d7d012a59d4b038f051cb9 228 Gene3D G3DSA:3.30.70.20 41 100 4.9E-36 T 22-04-2016 VP1927 4d87526105d7d012a59d4b038f051cb9 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 2.0E-132 T 22-04-2016 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VP1927 4d87526105d7d012a59d4b038f051cb9 228 SUPERFAMILY SSF54862 39 221 1.36E-64 T 22-04-2016 VP1927 4d87526105d7d012a59d4b038f051cb9 228 Gene3D G3DSA:3.30.70.20 134 170 2.2E-14 T 22-04-2016 VP1927 4d87526105d7d012a59d4b038f051cb9 228 Gene3D G3DSA:3.30.70.20 101 133 3.9E-13 T 22-04-2016 VP1927 4d87526105d7d012a59d4b038f051cb9 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1927 4d87526105d7d012a59d4b038f051cb9 228 PANTHER PTHR11938 5 199 9.1E-90 T 22-04-2016 VP1927 4d87526105d7d012a59d4b038f051cb9 228 PANTHER PTHR11938:SF110 5 199 9.1E-90 T 22-04-2016 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 Gene3D G3DSA:2.130.10.10 175 390 1.9E-4 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 PANTHER PTHR30425 382 500 4.0E-151 T 22-04-2016 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 PANTHER PTHR30425 565 734 4.0E-151 T 22-04-2016 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 PANTHER PTHR30425:SF3 382 500 4.0E-151 T 22-04-2016 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 PANTHER PTHR30425:SF3 565 734 4.0E-151 T 22-04-2016 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 SUPERFAMILY SSF69322 70 98 9.42E-8 T 22-04-2016 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 SUPERFAMILY SSF69322 140 379 9.42E-8 T 22-04-2016 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 Gene3D G3DSA:1.10.3720.10 33 54 6.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 Gene3D G3DSA:1.10.3720.10 516 732 2.6E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 Gene3D G3DSA:1.10.3720.10 416 515 6.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 1.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 SUPERFAMILY SSF161098 418 530 5.72E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0574 ff6a0c08a52dd9479c95e026874e5f76 734 SUPERFAMILY SSF161098 502 720 1.83E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0687 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 PANTHER PTHR12001:SF23 21 273 7.5E-105 T 22-04-2016 VP0687 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 Pfam PF00348 Polyprenyl synthetase 29 270 1.3E-57 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VP0687 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VP0687 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 Gene3D G3DSA:1.10.600.10 2 292 6.7E-92 T 22-04-2016 IPR008949 Isoprenoid synthase domain VP0687 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 SUPERFAMILY SSF48576 3 285 7.2E-86 T 22-04-2016 IPR008949 Isoprenoid synthase domain VP0687 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VP0687 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 PANTHER PTHR12001 21 273 7.5E-105 T 22-04-2016 IPR017446 Polyprenyl synthetase-related VP2591 61090f48bd3e4a05f9dd78acef1aa359 202 Gene3D G3DSA:3.40.50.10420 11 200 4.3E-57 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain VP2591 61090f48bd3e4a05f9dd78acef1aa359 202 PANTHER PTHR23407:SF1 2 201 8.9E-62 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VP2591 61090f48bd3e4a05f9dd78acef1aa359 202 PIRSF PIRSF006806 7 197 3.8E-36 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VP2591 61090f48bd3e4a05f9dd78acef1aa359 202 SUPERFAMILY SSF100950 10 200 1.95E-57 T 22-04-2016 VP2591 61090f48bd3e4a05f9dd78acef1aa359 202 PANTHER PTHR23407 2 201 8.9E-62 T 22-04-2016 VP2591 61090f48bd3e4a05f9dd78acef1aa359 202 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 194 3.6E-52 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VP2591 61090f48bd3e4a05f9dd78acef1aa359 202 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 194 3.5E-43 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VP1402 c2f2134966507a2aea63b092832daf5f 168 PANTHER PTHR35850 1 168 9.7E-76 T 22-04-2016 VP1402 c2f2134966507a2aea63b092832daf5f 168 PIRSF PIRSF028301 1 168 2.5E-63 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VP1402 c2f2134966507a2aea63b092832daf5f 168 PANTHER PTHR35850:SF2 1 168 9.7E-76 T 22-04-2016 VP1402 c2f2134966507a2aea63b092832daf5f 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 1.3E-58 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VP1402 c2f2134966507a2aea63b092832daf5f 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 2.8E-56 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 Pfam PF01266 FAD dependent oxidoreductase 3 397 2.6E-67 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 PANTHER PTHR13847:SF148 1 63 4.1E-211 T 22-04-2016 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 PANTHER PTHR13847:SF148 107 418 4.1E-211 T 22-04-2016 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 Gene3D G3DSA:3.50.50.60 108 130 1.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 Gene3D G3DSA:3.50.50.60 360 416 1.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 Gene3D G3DSA:3.50.50.60 191 269 1.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 Gene3D G3DSA:3.50.50.60 1 58 1.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 PANTHER PTHR13847 1 63 4.1E-211 T 22-04-2016 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 PANTHER PTHR13847 107 418 4.1E-211 T 22-04-2016 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 Gene3D G3DSA:3.30.9.10 134 190 3.3E-16 T 22-04-2016 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 Gene3D G3DSA:3.30.9.10 270 359 3.3E-16 T 22-04-2016 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 SUPERFAMILY SSF51905 1 54 3.24E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 SUPERFAMILY SSF51905 360 416 3.24E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 SUPERFAMILY SSF51905 107 270 3.24E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0623 e08d14bf4c93a57af7f3c36e2376a556 418 SUPERFAMILY SSF54373 270 360 1.29E-17 T 22-04-2016 VP2822 c1aeab424169dbb0484a4472c18f64c3 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 1.4E-19 T 22-04-2016 VP2822 c1aeab424169dbb0484a4472c18f64c3 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP2822 c1aeab424169dbb0484a4472c18f64c3 375 PANTHER PTHR30002:SF4 1 367 1.5E-192 T 22-04-2016 VP2822 c1aeab424169dbb0484a4472c18f64c3 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 1.4E-23 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 VP2822 c1aeab424169dbb0484a4472c18f64c3 375 PANTHER PTHR30002 1 367 1.5E-192 T 22-04-2016 VP2822 c1aeab424169dbb0484a4472c18f64c3 375 Gene3D G3DSA:3.30.70.20 187 261 1.6E-8 T 22-04-2016 VP2822 c1aeab424169dbb0484a4472c18f64c3 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 1.8E-153 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VP2822 c1aeab424169dbb0484a4472c18f64c3 375 SUPERFAMILY SSF54862 165 315 1.67E-19 T 22-04-2016 VP2822 c1aeab424169dbb0484a4472c18f64c3 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.999 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0594 17ce61746a1226e7f708a1f1a601ed17 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 2.6E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VP0594 17ce61746a1226e7f708a1f1a601ed17 239 PIRSF PIRSF004808 1 239 5.7E-72 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VP0594 17ce61746a1226e7f708a1f1a601ed17 239 SUPERFAMILY SSF75217 5 175 7.19E-38 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VP0594 17ce61746a1226e7f708a1f1a601ed17 239 PANTHER PTHR12029 7 180 1.1E-44 T 22-04-2016 VP0594 17ce61746a1226e7f708a1f1a601ed17 239 Gene3D G3DSA:3.40.1280.10 3 157 1.7E-33 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VP0594 17ce61746a1226e7f708a1f1a601ed17 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 2.9E-84 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VP1228 474c6559275e3cbc79cfda229e702876 383 Gene3D G3DSA:1.20.1530.10 5 379 1.6E-152 T 22-04-2016 IPR023171 Na/H antiporter domain VP1228 474c6559275e3cbc79cfda229e702876 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.3E-194 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VP1228 474c6559275e3cbc79cfda229e702876 383 PANTHER PTHR30341 1 383 3.3E-197 T 22-04-2016 VP1228 474c6559275e3cbc79cfda229e702876 383 PANTHER PTHR30341:SF0 1 383 3.3E-197 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VP1228 474c6559275e3cbc79cfda229e702876 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.634 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VP1228 474c6559275e3cbc79cfda229e702876 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 2.4E-145 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VP1586 87c532582aa0cb8889d596b9266f9550 88 Pfam PF01381 Helix-turn-helix 15 60 2.9E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP1586 87c532582aa0cb8889d596b9266f9550 88 Gene3D G3DSA:1.10.260.40 9 67 1.7E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1586 87c532582aa0cb8889d596b9266f9550 88 SUPERFAMILY SSF47413 8 66 5.35E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 SMART SM00388 461 530 7.0E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 SUPERFAMILY SSF52172 720 835 2.13E-30 T 22-04-2016 IPR011006 CheY-like superfamily VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 PANTHER PTHR24423 438 834 1.5E-62 T 22-04-2016 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 SUPERFAMILY SSF55874 521 682 1.44E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 Gene3D G3DSA:1.10.287.130 457 522 1.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 Gene3D G3DSA:3.40.50.2300 717 836 1.0E-31 T 22-04-2016 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 SUPERFAMILY SSF47384 455 521 1.96E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 SMART SM00387 574 683 1.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 Gene3D G3DSA:3.30.565.10 523 684 5.6E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 681 2.8E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 6.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 Pfam PF00072 Response regulator receiver domain 722 829 7.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1968 dd8d355ef290b22697bee5f5faa05ccf 850 SMART SM00448 720 830 3.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1862 6af1a9107e2e6bd8615371892167b921 211 PANTHER PTHR30086:SF1 3 205 3.2E-33 T 22-04-2016 VP1862 6af1a9107e2e6bd8615371892167b921 211 Pfam PF01810 LysE type translocator 16 207 2.6E-32 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP1862 6af1a9107e2e6bd8615371892167b921 211 PANTHER PTHR30086 3 205 3.2E-33 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP2346 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF54292 38 124 1.06E-21 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP2346 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:3.10.20.30 34 123 9.0E-21 T 22-04-2016 IPR012675 Beta-grasp domain VP2346 344cef93d718ea5c34938b324ea442b5 407 PIRSF PIRSF000044 1 407 4.8E-219 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 PANTHER PTHR19370:SF32 62 176 5.3E-145 T 22-04-2016 VP2346 344cef93d718ea5c34938b324ea442b5 407 PANTHER PTHR19370:SF32 205 407 5.3E-145 T 22-04-2016 VP2346 344cef93d718ea5c34938b324ea442b5 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.814 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF63380 105 272 3.08E-36 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.7E-16 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 PANTHER PTHR19370 62 176 5.3E-145 T 22-04-2016 VP2346 344cef93d718ea5c34938b324ea442b5 407 PANTHER PTHR19370 205 407 5.3E-145 T 22-04-2016 VP2346 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF52343 258 402 9.82E-36 T 22-04-2016 VP2346 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.4E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP2346 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 6.6E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VP2346 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2346 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:3.40.50.80 269 406 6.3E-41 T 22-04-2016 VP2346 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:2.40.30.10 124 264 1.6E-62 T 22-04-2016 VP2346 344cef93d718ea5c34938b324ea442b5 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.1E-229 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VP2228 bdd15827c6613d88864e4d990201bb7f 369 SUPERFAMILY SSF52172 2 109 7.83E-27 T 22-04-2016 IPR011006 CheY-like superfamily VP2228 bdd15827c6613d88864e4d990201bb7f 369 SMART SM00448 3 126 1.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2228 bdd15827c6613d88864e4d990201bb7f 369 PIRSF PIRSF000876 1 367 1.7E-127 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VP2228 bdd15827c6613d88864e4d990201bb7f 369 Gene3D G3DSA:3.40.50.180 176 363 4.3E-72 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VP2228 bdd15827c6613d88864e4d990201bb7f 369 Pfam PF01339 CheB methylesterase 184 361 3.6E-58 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VP2228 bdd15827c6613d88864e4d990201bb7f 369 PANTHER PTHR24421:SF16 1 366 7.3E-172 T 22-04-2016 VP2228 bdd15827c6613d88864e4d990201bb7f 369 SUPERFAMILY SSF52738 178 363 1.7E-62 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VP2228 bdd15827c6613d88864e4d990201bb7f 369 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 367 38.804 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VP2228 bdd15827c6613d88864e4d990201bb7f 369 Gene3D G3DSA:3.40.50.2300 2 109 3.6E-30 T 22-04-2016 VP2228 bdd15827c6613d88864e4d990201bb7f 369 Pfam PF00072 Response regulator receiver domain 5 109 1.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2228 bdd15827c6613d88864e4d990201bb7f 369 PANTHER PTHR24421 1 366 7.3E-172 T 22-04-2016 VP0833 630b72149f82cf94556ac29d53523cd9 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.4E-46 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VP0833 630b72149f82cf94556ac29d53523cd9 149 Gene3D G3DSA:1.10.10.10 2 82 1.5E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0833 630b72149f82cf94556ac29d53523cd9 149 PANTHER PTHR33202 1 135 6.9E-45 T 22-04-2016 VP0833 630b72149f82cf94556ac29d53523cd9 149 SUPERFAMILY SSF46785 5 135 8.86E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0630 9dffecea45052f927d0612cea2afbdd4 443 Pfam PF00202 Aminotransferase class-III 13 434 4.9E-112 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP0630 9dffecea45052f927d0612cea2afbdd4 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP0630 9dffecea45052f927d0612cea2afbdd4 443 SUPERFAMILY SSF53383 7 437 7.48E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0630 9dffecea45052f927d0612cea2afbdd4 443 Gene3D G3DSA:3.90.1150.10 309 438 9.5E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP0630 9dffecea45052f927d0612cea2afbdd4 443 PANTHER PTHR11986 6 443 9.9E-187 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP0630 9dffecea45052f927d0612cea2afbdd4 443 PIRSF PIRSF000521 1 438 2.0E-33 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP0630 9dffecea45052f927d0612cea2afbdd4 443 Gene3D G3DSA:3.40.640.10 48 308 1.7E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0630 9dffecea45052f927d0612cea2afbdd4 443 PANTHER PTHR11986:SF78 6 443 9.9E-187 T 22-04-2016 VP0323 cc0d059e767749fe945af94e42d7c702 322 Pfam PF16868 NMT1-like family 30 319 1.4E-97 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VP0323 cc0d059e767749fe945af94e42d7c702 322 Gene3D G3DSA:3.40.190.10 118 250 6.6E-36 T 22-04-2016 VP0323 cc0d059e767749fe945af94e42d7c702 322 PANTHER PTHR30024:SF13 1 322 2.2E-117 T 22-04-2016 VP0323 cc0d059e767749fe945af94e42d7c702 322 PANTHER PTHR30024 1 322 2.2E-117 T 22-04-2016 VP0323 cc0d059e767749fe945af94e42d7c702 322 SUPERFAMILY SSF53850 25 321 2.04E-88 T 22-04-2016 VP0323 cc0d059e767749fe945af94e42d7c702 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 4.0E-113 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VP0323 cc0d059e767749fe945af94e42d7c702 322 Gene3D G3DSA:3.40.190.10 25 108 1.3E-67 T 22-04-2016 VP0323 cc0d059e767749fe945af94e42d7c702 322 Gene3D G3DSA:3.40.190.10 251 320 1.3E-67 T 22-04-2016 VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 Pfam PF13633 Prokaryotic N-terminal methylation site 9 35 1.8E-12 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 Gene3D G3DSA:3.30.700.10 12 127 1.3E-25 T 22-04-2016 VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 SUPERFAMILY SSF54523 12 131 9.42E-23 T 22-04-2016 VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 PANTHER PTHR30093 1 67 8.1E-19 T 22-04-2016 VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 3.0E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 Pfam PF00114 Pilin (bacterial filament) 40 129 6.9E-11 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 PRINTS PR00885 Bacterial general secretion pathway protein H signature 22 36 3.4E-5 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VP2523 13cbf54faee1651b3cac6ed1bdbd5321 139 PRINTS PR00885 Bacterial general secretion pathway protein H signature 7 21 3.4E-5 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 PANTHER PTHR11469:SF11 1 550 0.0 T 22-04-2016 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 294 507 4.6E-149 T 22-04-2016 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 9 99 4.6E-149 T 22-04-2016 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.181 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 SUPERFAMILY SSF53697 6 548 2.72E-226 T 22-04-2016 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 PANTHER PTHR11469 1 550 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:1.10.1390.10 508 548 1.1E-21 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 Pfam PF00342 Phosphoglucose isomerase 53 542 2.9E-255 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 100 291 2.3E-90 T 22-04-2016 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP2731 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VP0656 8cf6fd50c26a3a947ba52c0a206c4abf 143 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 38 122 1.4E-14 T 22-04-2016 IPR031982 Type IV minor pilin ComP VP0656 8cf6fd50c26a3a947ba52c0a206c4abf 143 SUPERFAMILY SSF54523 17 135 2.15E-18 T 22-04-2016 VP0656 8cf6fd50c26a3a947ba52c0a206c4abf 143 Gene3D G3DSA:3.30.700.10 18 136 3.1E-15 T 22-04-2016 VP0656 8cf6fd50c26a3a947ba52c0a206c4abf 143 PANTHER PTHR30093 1 67 7.2E-14 T 22-04-2016 VP0656 8cf6fd50c26a3a947ba52c0a206c4abf 143 PANTHER PTHR30093:SF4 1 67 7.2E-14 T 22-04-2016 VP0656 8cf6fd50c26a3a947ba52c0a206c4abf 143 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 15 36 4.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0656 8cf6fd50c26a3a947ba52c0a206c4abf 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0656 8cf6fd50c26a3a947ba52c0a206c4abf 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 1.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 2.2E-43 T 22-04-2016 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 Gene3D G3DSA:3.40.190.10 268 311 1.6E-63 T 22-04-2016 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 Gene3D G3DSA:3.40.190.10 23 129 1.6E-63 T 22-04-2016 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PANTHER PTHR30222 3 342 3.5E-170 T 22-04-2016 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PANTHER PTHR30222:SF10 3 342 3.5E-170 T 22-04-2016 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 Gene3D G3DSA:3.40.190.10 131 267 8.6E-23 T 22-04-2016 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 SUPERFAMILY SSF53850 24 342 5.43E-94 T 22-04-2016 VP1525 94f682c6ed638ba6b15bcf18fcd46853 345 PIRSF PIRSF019574 1 345 7.3E-125 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VP2304 0e27fba81d2b44e6b7b915b6a60ff9c7 211 PANTHER PTHR10954 21 209 7.6E-83 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 VP2304 0e27fba81d2b44e6b7b915b6a60ff9c7 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 37.934 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 VP2304 0e27fba81d2b44e6b7b915b6a60ff9c7 211 SUPERFAMILY SSF53098 19 209 4.86E-71 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2304 0e27fba81d2b44e6b7b915b6a60ff9c7 211 Gene3D G3DSA:3.30.420.10 25 166 3.3E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2304 0e27fba81d2b44e6b7b915b6a60ff9c7 211 Pfam PF01351 Ribonuclease HII 27 203 3.9E-38 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 SUPERFAMILY SSF55021 421 514 5.95E-27 T 22-04-2016 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 2.0E-252 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 Gene3D G3DSA:3.40.50.1100 82 335 1.4E-82 T 22-04-2016 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 PANTHER PTHR10314 1 369 7.0E-206 T 22-04-2016 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 1.3E-25 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 4.4E-27 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 SUPERFAMILY SSF55021 338 424 1.3E-27 T 22-04-2016 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 7.5E-85 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 PANTHER PTHR10314:SF30 1 369 7.0E-206 T 22-04-2016 VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 SUPERFAMILY SSF53686 16 366 5.24E-108 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP3062 b9ab4fe14f473f564facb2e0a72a92ae 515 Gene3D G3DSA:3.40.1020.10 341 514 2.6E-55 T 22-04-2016 VP2896 dae8c8ca47986bf3426c42137f055e90 530 SUPERFAMILY SSF52335 7 197 6.41E-72 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VP2896 dae8c8ca47986bf3426c42137f055e90 530 Gene3D G3DSA:3.40.140.20 378 520 9.4E-61 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VP2896 dae8c8ca47986bf3426c42137f055e90 530 PANTHER PTHR11692:SF2 5 530 0.0 T 22-04-2016 VP2896 dae8c8ca47986bf3426c42137f055e90 530 SUPERFAMILY SSF53927 222 530 8.02E-131 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VP2896 dae8c8ca47986bf3426c42137f055e90 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 1.4E-260 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VP2896 dae8c8ca47986bf3426c42137f055e90 530 SMART SM00851 19 132 1.2E-61 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VP2896 dae8c8ca47986bf3426c42137f055e90 530 Gene3D G3DSA:3.40.140.20 254 373 9.9E-51 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VP2896 dae8c8ca47986bf3426c42137f055e90 530 SMART SM00798 137 462 2.6E-219 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VP2896 dae8c8ca47986bf3426c42137f055e90 530 PIRSF PIRSF000414 1 530 1.2E-228 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VP2896 dae8c8ca47986bf3426c42137f055e90 530 Pfam PF02142 MGS-like domain 19 132 1.2E-31 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VP2896 dae8c8ca47986bf3426c42137f055e90 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 1.8E-120 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VP2896 dae8c8ca47986bf3426c42137f055e90 530 PANTHER PTHR11692 5 530 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VP2896 dae8c8ca47986bf3426c42137f055e90 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.991 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VP2896 dae8c8ca47986bf3426c42137f055e90 530 Gene3D G3DSA:3.40.50.1380 5 190 6.3E-87 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VP1305 049fbc5677e890c3434f0b5604e04258 265 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 265 47.968 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VP1305 049fbc5677e890c3434f0b5604e04258 265 Pfam PF02654 Cobalamin-5-phosphate synthase 22 256 6.9E-54 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VP1305 049fbc5677e890c3434f0b5604e04258 265 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 19 258 6.0E-37 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VP1305 049fbc5677e890c3434f0b5604e04258 265 PANTHER PTHR34148:SF1 9 265 4.9E-56 T 22-04-2016 VP1305 049fbc5677e890c3434f0b5604e04258 265 PANTHER PTHR34148 9 265 4.9E-56 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 Gene3D G3DSA:1.10.3370.10 15 438 1.8E-163 T 22-04-2016 IPR023201 SecY subunit domain VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 22-04-2016 IPR030659 SecY conserved site VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.21 T 22-04-2016 IPR026593 Protein translocase subunit SecY VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PANTHER PTHR10906:SF2 17 444 1.1E-228 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 22-04-2016 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PANTHER PTHR10906 17 444 1.1E-228 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 Pfam PF00344 SecY translocase 76 418 5.5E-118 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 SUPERFAMILY SSF103491 15 425 5.62E-131 T 22-04-2016 IPR023201 SecY subunit domain VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 3.4E-134 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VP0277 cd99ea128a4656b285fc32fee62ce7bc 444 PIRSF PIRSF004557 10 442 3.5E-122 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VP1255 f66492502069ce3f9c70c28f6015a5e3 445 Gene3D G3DSA:3.30.70.270 280 433 5.9E-46 T 22-04-2016 VP1255 f66492502069ce3f9c70c28f6015a5e3 445 PANTHER PTHR10799:SF750 157 431 5.9E-23 T 22-04-2016 VP1255 f66492502069ce3f9c70c28f6015a5e3 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 434 3.1E-42 T 22-04-2016 IPR000160 GGDEF domain VP1255 f66492502069ce3f9c70c28f6015a5e3 445 SUPERFAMILY SSF55073 283 433 6.54E-41 T 22-04-2016 IPR029787 Nucleotide cyclase VP1255 f66492502069ce3f9c70c28f6015a5e3 445 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 39 167 6.6E-4 T 22-04-2016 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 VP1255 f66492502069ce3f9c70c28f6015a5e3 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 5.3E-38 T 22-04-2016 IPR000160 GGDEF domain VP1255 f66492502069ce3f9c70c28f6015a5e3 445 PANTHER PTHR10799 157 431 5.9E-23 T 22-04-2016 VP1255 f66492502069ce3f9c70c28f6015a5e3 445 SUPERFAMILY SSF49785 39 215 1.79E-11 T 22-04-2016 IPR008979 Galactose-binding domain-like VP1255 f66492502069ce3f9c70c28f6015a5e3 445 SMART SM00267 267 434 1.1E-46 T 22-04-2016 IPR000160 GGDEF domain VP2557 d50e298bcd539d6ff31dad065c743d80 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 225 4.3E-54 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2557 d50e298bcd539d6ff31dad065c743d80 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 337 5.5E-22 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2557 d50e298bcd539d6ff31dad065c743d80 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 4.6E-42 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2557 d50e298bcd539d6ff31dad065c743d80 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2557 d50e298bcd539d6ff31dad065c743d80 347 SUPERFAMILY SSF55120 6 339 5.04E-98 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2557 d50e298bcd539d6ff31dad065c743d80 347 PANTHER PTHR13326 10 339 2.6E-70 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2557 d50e298bcd539d6ff31dad065c743d80 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.887 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2625 3e580b2f8c1dbeb253f5c3ee67494288 239 PANTHER PTHR23417:SF14 16 237 4.0E-86 T 22-04-2016 VP2625 3e580b2f8c1dbeb253f5c3ee67494288 239 SUPERFAMILY SSF53335 16 238 2.39E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2625 3e580b2f8c1dbeb253f5c3ee67494288 239 PANTHER PTHR23417 16 237 4.0E-86 T 22-04-2016 VP2625 3e580b2f8c1dbeb253f5c3ee67494288 239 Gene3D G3DSA:3.40.50.150 61 194 1.6E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2625 3e580b2f8c1dbeb253f5c3ee67494288 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.683 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VP2625 3e580b2f8c1dbeb253f5c3ee67494288 239 Pfam PF02390 Putative methyltransferase 62 232 2.4E-58 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VP2625 3e580b2f8c1dbeb253f5c3ee67494288 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 7.4E-67 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VP2746 9882d713a580892e227dd76ef5d5bdce 578 PANTHER PTHR30604 15 578 1.1E-134 T 22-04-2016 VP2746 9882d713a580892e227dd76ef5d5bdce 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 319 329 7.6E-20 T 22-04-2016 IPR001775 GspD/PilQ family VP2746 9882d713a580892e227dd76ef5d5bdce 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 414 438 7.6E-20 T 22-04-2016 IPR001775 GspD/PilQ family VP2746 9882d713a580892e227dd76ef5d5bdce 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 449 459 7.6E-20 T 22-04-2016 IPR001775 GspD/PilQ family VP2746 9882d713a580892e227dd76ef5d5bdce 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 564 578 7.6E-20 T 22-04-2016 IPR001775 GspD/PilQ family VP2746 9882d713a580892e227dd76ef5d5bdce 578 PRINTS PR00811 Bacterial general secretion pathway protein D signature 541 559 7.6E-20 T 22-04-2016 IPR001775 GspD/PilQ family VP2746 9882d713a580892e227dd76ef5d5bdce 578 SMART SM00965 180 228 7.6E-9 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VP2746 9882d713a580892e227dd76ef5d5bdce 578 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 522 555 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VP2746 9882d713a580892e227dd76ef5d5bdce 578 Pfam PF03958 Bacterial type II/III secretion system short domain 254 319 9.3E-13 T 22-04-2016 IPR005644 NolW-like VP2746 9882d713a580892e227dd76ef5d5bdce 578 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 155 576 9.3E-165 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 VP2746 9882d713a580892e227dd76ef5d5bdce 578 Pfam PF00263 Bacterial type II and III secretion system protein 418 576 3.1E-46 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 Gene3D G3DSA:3.40.50.1580 18 282 1.5E-92 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 Pfam PF01048 Phosphorylase superfamily 35 281 1.8E-43 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 SUPERFAMILY SSF53167 22 283 6.95E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 PANTHER PTHR11904:SF9 8 282 2.2E-114 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 35 281 2.4E-99 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 PIRSF PIRSF000477 5 284 4.7E-104 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 35 282 1.5E-122 T 22-04-2016 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00119|UniPathway: UPA00606 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 87 128 - T 22-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 VP0066 83c038443dd6f3e3f6ac485cb8febaf7 285 PANTHER PTHR11904 8 282 2.2E-114 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase VP2830 651fad5bf6ba04f07a48b53eafbff7ba 144 PANTHER PTHR12231 1 144 1.4E-43 T 22-04-2016 VP2830 651fad5bf6ba04f07a48b53eafbff7ba 144 SMART SM00450 40 138 1.6E-20 T 22-04-2016 IPR001763 Rhodanese-like domain VP2830 651fad5bf6ba04f07a48b53eafbff7ba 144 Gene3D G3DSA:3.40.250.10 22 143 2.9E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VP2830 651fad5bf6ba04f07a48b53eafbff7ba 144 SUPERFAMILY SSF52821 15 143 2.1E-30 T 22-04-2016 IPR001763 Rhodanese-like domain VP2830 651fad5bf6ba04f07a48b53eafbff7ba 144 Pfam PF00581 Rhodanese-like domain 44 135 6.6E-17 T 22-04-2016 IPR001763 Rhodanese-like domain VP2830 651fad5bf6ba04f07a48b53eafbff7ba 144 PANTHER PTHR12231:SF138 1 144 1.4E-43 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PANTHER PTHR24423 8 18 5.8E-128 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PANTHER PTHR24423 371 428 5.8E-128 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PANTHER PTHR24423 457 886 5.8E-128 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PANTHER PTHR24423 148 217 5.8E-128 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF47384 446 527 2.35E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:3.30.450.20 233 353 8.0E-6 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF55785 860 927 2.09E-8 T 22-04-2016 IPR000014 PAS domain VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF55874 516 687 2.1E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00388 459 527 1.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF158472 378 429 1.27E-10 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.0E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00387 573 684 4.7E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF13188 PAS domain 879 916 1.7E-4 T 22-04-2016 IPR000014 PAS domain VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:3.30.450.20 868 926 1.7E-9 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF52172 718 843 1.25E-40 T 22-04-2016 IPR011006 CheY-like superfamily VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00448 722 835 3.3E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00091 873 938 7.0E-6 T 22-04-2016 IPR000014 PAS domain VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00304 377 430 1.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:3.30.565.10 513 687 5.7E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:1.10.287.130 452 512 9.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF00672 HAMP domain 358 427 5.8E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PANTHER PTHR24423:SF374 8 18 5.8E-128 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PANTHER PTHR24423:SF374 371 428 5.8E-128 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PANTHER PTHR24423:SF374 457 886 5.8E-128 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 PANTHER PTHR24423:SF374 148 217 5.8E-128 T 22-04-2016 VP2478 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:3.40.50.2300 722 843 2.5E-41 T 22-04-2016 VP1523 40e1121473cc260e493aec48e02f07a6 427 PANTHER PTHR11730 13 427 4.3E-120 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VP1523 40e1121473cc260e493aec48e02f07a6 427 SUPERFAMILY SSF111352 38 405 2.75E-95 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VP1523 40e1121473cc260e493aec48e02f07a6 427 Gene3D G3DSA:1.10.3430.10 36 405 1.2E-94 T 22-04-2016 IPR029020 Ammonium/urea transporter VP1523 40e1121473cc260e493aec48e02f07a6 427 PANTHER PTHR11730:SF6 13 427 4.3E-120 T 22-04-2016 VP1523 40e1121473cc260e493aec48e02f07a6 427 Pfam PF00909 Ammonium Transporter Family 44 420 7.1E-87 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 Pfam PF08029 HisG, C-terminal domain 228 301 6.7E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 Pfam PF01634 ATP phosphoribosyltransferase 59 224 9.0E-44 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 SUPERFAMILY SSF53850 11 228 2.17E-66 T 22-04-2016 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 210 303 3.3E-30 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 11 304 35.157 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 Gene3D G3DSA:3.40.190.10 8 144 1.7E-48 T 22-04-2016 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 Gene3D G3DSA:3.30.70.120 231 304 4.7E-30 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 PANTHER PTHR21403:SF0 7 304 7.5E-120 T 22-04-2016 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 SUPERFAMILY SSF54913 231 303 6.0E-21 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 161 182 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 PANTHER PTHR21403 7 304 7.5E-120 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VP1137 e3f639323ca22eebd3ea66f7aadccdc6 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 12 202 6.7E-55 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VP2764 698533d197ec631cc29c75de4e372ba5 802 SUPERFAMILY SSF55347 600 783 7.19E-45 T 22-04-2016 VP2764 698533d197ec631cc29c75de4e372ba5 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VP2764 698533d197ec631cc29c75de4e372ba5 802 Pfam PF00696 Amino acid kinase family 5 274 2.4E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2764 698533d197ec631cc29c75de4e372ba5 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.3E-66 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2764 698533d197ec631cc29c75de4e372ba5 802 Pfam PF00742 Homoserine dehydrogenase 600 795 3.3E-43 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VP2764 698533d197ec631cc29c75de4e372ba5 802 PANTHER PTHR21499 378 799 2.9E-201 T 22-04-2016 VP2764 698533d197ec631cc29c75de4e372ba5 802 SUPERFAMILY SSF51735 448 622 8.86E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2764 698533d197ec631cc29c75de4e372ba5 802 PANTHER PTHR21499:SF29 378 799 2.9E-201 T 22-04-2016 VP2764 698533d197ec631cc29c75de4e372ba5 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2764 698533d197ec631cc29c75de4e372ba5 802 Gene3D G3DSA:3.40.50.720 448 621 3.3E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2764 698533d197ec631cc29c75de4e372ba5 802 PIRSF PIRSF000727 5 802 7.3E-288 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VP2764 698533d197ec631cc29c75de4e372ba5 802 Gene3D G3DSA:3.40.1160.10 106 291 2.3E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2764 698533d197ec631cc29c75de4e372ba5 802 Gene3D G3DSA:3.40.1160.10 2 52 2.3E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2764 698533d197ec631cc29c75de4e372ba5 802 SUPERFAMILY SSF53633 5 291 1.31E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2764 698533d197ec631cc29c75de4e372ba5 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 3.4E-14 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VP2764 698533d197ec631cc29c75de4e372ba5 802 Gene3D G3DSA:3.30.360.10 622 778 5.6E-49 T 22-04-2016 VP1635 a600773ad2f0873cf5e49962045500f9 206 Pfam PF00691 OmpA family 83 178 5.5E-19 T 22-04-2016 IPR006665 OmpA-like domain VP1635 a600773ad2f0873cf5e49962045500f9 206 Gene3D G3DSA:4.10.1080.10 39 73 8.3E-6 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VP1635 a600773ad2f0873cf5e49962045500f9 206 PANTHER PTHR30128:SF15 36 202 4.9E-60 T 22-04-2016 VP1635 a600773ad2f0873cf5e49962045500f9 206 PANTHER PTHR30128 36 202 4.9E-60 T 22-04-2016 VP1635 a600773ad2f0873cf5e49962045500f9 206 SUPERFAMILY SSF103088 56 182 2.35E-29 T 22-04-2016 IPR006665 OmpA-like domain VP1635 a600773ad2f0873cf5e49962045500f9 206 PRINTS PR01021 OMPA domain signature 84 106 1.7E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1635 a600773ad2f0873cf5e49962045500f9 206 PRINTS PR01021 OMPA domain signature 114 129 1.7E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1635 a600773ad2f0873cf5e49962045500f9 206 PRINTS PR01021 OMPA domain signature 129 145 1.7E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1635 a600773ad2f0873cf5e49962045500f9 206 Gene3D G3DSA:3.30.1330.60 76 185 1.3E-29 T 22-04-2016 IPR006665 OmpA-like domain VP1635 a600773ad2f0873cf5e49962045500f9 206 SUPERFAMILY SSF103647 23 71 1.12E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SMART SM00267 472 644 8.4E-40 T 22-04-2016 IPR000160 GGDEF domain VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 Pfam PF00990 Diguanylate cyclase, GGDEF domain 483 639 8.6E-34 T 22-04-2016 IPR000160 GGDEF domain VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 Gene3D G3DSA:3.30.70.270 485 642 4.0E-37 T 22-04-2016 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 Pfam PF13181 Tetratricopeptide repeat 298 325 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SUPERFAMILY SSF48452 195 419 2.47E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SUPERFAMILY SSF48452 92 206 2.42E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 Pfam PF13424 Tetratricopeptide repeat 218 288 7.4E-10 T 22-04-2016 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 Gene3D G3DSA:1.25.40.10 232 419 3.3E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 Pfam PF13176 Tetratricopeptide repeat 381 409 0.0068 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 PANTHER PTHR10098 185 400 6.4E-24 T 22-04-2016 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SUPERFAMILY SSF55073 488 642 3.14E-34 T 22-04-2016 IPR029787 Nucleotide cyclase VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 Gene3D G3DSA:1.25.40.10 110 231 9.8E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SMART SM00028 216 249 91.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SMART SM00028 256 289 0.0078 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SMART SM00028 296 329 6.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SMART SM00028 336 369 24.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SMART SM00028 179 212 400.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 SMART SM00028 376 409 25.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1637 c49e2af0077be39f6c59ab9728f9c21e 658 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 642 8.4E-38 T 22-04-2016 IPR000160 GGDEF domain VP2080 866192ad1c35f529ceca0a451612e3d2 321 Gene3D G3DSA:3.40.50.2300 27 155 4.3E-57 T 22-04-2016 VP2080 866192ad1c35f529ceca0a451612e3d2 321 Gene3D G3DSA:3.40.50.2300 156 287 3.6E-47 T 22-04-2016 VP2080 866192ad1c35f529ceca0a451612e3d2 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 1.2E-111 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein VP2080 866192ad1c35f529ceca0a451612e3d2 321 SUPERFAMILY SSF53822 43 279 2.94E-18 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP2080 866192ad1c35f529ceca0a451612e3d2 321 PANTHER PTHR35271 1 321 8.9E-73 T 22-04-2016 VP2373 ba4edc38986bdef3dba12cad8152f572 715 Pfam PF13538 UvrD-like helicase C-terminal domain 642 688 1.2E-14 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain VP2373 ba4edc38986bdef3dba12cad8152f572 715 Gene3D G3DSA:3.40.50.300 510 572 3.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2373 ba4edc38986bdef3dba12cad8152f572 715 Gene3D G3DSA:3.40.50.300 634 691 3.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2373 ba4edc38986bdef3dba12cad8152f572 715 Gene3D G3DSA:3.40.50.300 242 412 3.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2373 ba4edc38986bdef3dba12cad8152f572 715 Gene3D G3DSA:3.40.50.300 444 474 3.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2373 ba4edc38986bdef3dba12cad8152f572 715 SUPERFAMILY SSF52540 540 713 9.74E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2373 ba4edc38986bdef3dba12cad8152f572 715 PANTHER PTHR10887:SF351 241 415 5.8E-86 T 22-04-2016 VP2373 ba4edc38986bdef3dba12cad8152f572 715 PANTHER PTHR10887:SF351 67 94 5.8E-86 T 22-04-2016 VP2373 ba4edc38986bdef3dba12cad8152f572 715 SUPERFAMILY SSF52540 374 472 9.74E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2373 ba4edc38986bdef3dba12cad8152f572 715 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 26 713 53.082 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VP2373 ba4edc38986bdef3dba12cad8152f572 715 PANTHER PTHR10887 241 415 5.8E-86 T 22-04-2016 VP2373 ba4edc38986bdef3dba12cad8152f572 715 PANTHER PTHR10887 67 94 5.8E-86 T 22-04-2016 VP2373 ba4edc38986bdef3dba12cad8152f572 715 Pfam PF13604 AAA domain 248 409 1.9E-30 T 22-04-2016 VP2373 ba4edc38986bdef3dba12cad8152f572 715 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 18 713 1.9E-217 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VP2373 ba4edc38986bdef3dba12cad8152f572 715 SUPERFAMILY SSF52540 239 454 6.07E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2373 ba4edc38986bdef3dba12cad8152f572 715 SUPERFAMILY SSF52540 20 172 6.07E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1383 fbb8ed9565cfa51b5dec8cddc0c5c229 250 PANTHER PTHR30060:SF1 1 241 4.5E-75 T 22-04-2016 VP1383 fbb8ed9565cfa51b5dec8cddc0c5c229 250 PANTHER PTHR30060 1 241 4.5E-75 T 22-04-2016 VP1383 fbb8ed9565cfa51b5dec8cddc0c5c229 250 Pfam PF03741 Integral membrane protein TerC family 16 203 5.6E-44 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 SUPERFAMILY SSF53850 89 296 2.82E-39 T 22-04-2016 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 Pfam PF03466 LysR substrate binding domain 89 290 2.5E-43 T 22-04-2016 IPR005119 LysR, substrate-binding VP2752 12b8e7971c38b347a7fbad58d07049cd 302 SUPERFAMILY SSF46785 1 111 5.28E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2752 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:3.40.190.10 90 175 1.5E-18 T 22-04-2016 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:1.10.10.10 1 83 4.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2752 12b8e7971c38b347a7fbad58d07049cd 302 PANTHER PTHR30346:SF15 1 297 2.6E-128 T 22-04-2016 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:3.40.190.10 176 266 3.8E-31 T 22-04-2016 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 PANTHER PTHR30346 1 297 2.6E-128 T 22-04-2016 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2752 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0939 efcabeed6a1c0e099ca849bcaab3da4e 290 Pfam PF04280 Tim44-like domain 168 289 9.9E-15 T 22-04-2016 IPR007379 Tim44-like domain VP0939 efcabeed6a1c0e099ca849bcaab3da4e 290 PANTHER PTHR41542:SF1 1 290 2.6E-82 T 22-04-2016 VP0939 efcabeed6a1c0e099ca849bcaab3da4e 290 Pfam PF07466 Protein of unknown function (DUF1517) 28 125 1.3E-5 T 22-04-2016 IPR010903 Protein of unknown function DUF1517 VP0939 efcabeed6a1c0e099ca849bcaab3da4e 290 SUPERFAMILY SSF54427 169 289 1.45E-16 T 22-04-2016 IPR032710 NTF2-like domain VP0939 efcabeed6a1c0e099ca849bcaab3da4e 290 SMART SM00978 159 290 5.1E-36 T 22-04-2016 IPR007379 Tim44-like domain VP0939 efcabeed6a1c0e099ca849bcaab3da4e 290 PANTHER PTHR41542 1 290 2.6E-82 T 22-04-2016 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 SUPERFAMILY SSF68923 1 78 1.24E-31 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 116 131 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 Gene3D G3DSA:3.40.449.10 1 77 8.1E-33 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 PANTHER PTHR30031:SF0 1 331 7.1E-229 T 22-04-2016 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 Gene3D G3DSA:3.90.228.20 202 331 1.1E-101 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 Gene3D G3DSA:3.90.228.20 79 141 1.1E-101 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 PANTHER PTHR30031 1 331 7.1E-229 T 22-04-2016 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 Pfam PF01293 Phosphoenolpyruvate carboxykinase 1 331 1.0E-164 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 1 331 3.5E-197 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPA0144 fdd73628969360811c74ce4ce7953d3d 331 SUPERFAMILY SSF53795 80 331 2.88E-111 T 22-04-2016 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.8E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.8E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.8E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.8E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.10.10.10 175 238 9.9E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 PANTHER PTHR30385 5 244 6.0E-78 T 22-04-2016 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.10.601.10 16 83 1.5E-16 T 22-04-2016 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.10.10.10 91 138 9.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.854 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 1.3E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88659 92 164 5.23E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04542 Sigma-70 region 2 19 91 5.8E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 PANTHER PTHR30385:SF7 5 244 6.0E-78 T 22-04-2016 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88946 6 91 3.79E-24 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04539 Sigma-70 region 3 100 161 6.7E-12 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88659 155 239 9.53E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 PIRSF PIRSF000770 2 243 8.5E-40 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04545 Sigma-70, region 4 187 234 3.3E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2232 8f53a4f75eccb81c0e9a8d16030b91f3 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 6.3E-87 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 5.2E-56 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PANTHER PTHR11405 1 277 1.4E-206 T 22-04-2016 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PANTHER PTHR11405 297 333 1.4E-206 T 22-04-2016 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.1E-46 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PANTHER PTHR11405:SF44 1 277 1.4E-206 T 22-04-2016 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PANTHER PTHR11405:SF44 297 333 1.4E-206 T 22-04-2016 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.136 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 Gene3D G3DSA:3.40.50.1370 5 144 1.2E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.5E-132 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 Gene3D G3DSA:3.40.50.1370 145 319 1.3E-74 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2653 4589bd3f9afe32ddbffbcc6f05e549fe 334 SUPERFAMILY SSF53671 4 333 6.68E-99 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP1285 497f112c201546f96da7aac88ecd24e5 286 Pfam PF00440 Bacterial regulatory proteins, tetR family 59 105 8.9E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP1285 497f112c201546f96da7aac88ecd24e5 286 Gene3D G3DSA:1.10.357.10 48 227 7.9E-22 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VP1285 497f112c201546f96da7aac88ecd24e5 286 SUPERFAMILY SSF46689 51 110 4.72E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1285 497f112c201546f96da7aac88ecd24e5 286 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 80 103 1.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP1285 497f112c201546f96da7aac88ecd24e5 286 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 59 72 1.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP3057 d419bb34517f188f81b8267571c3f633 507 SUPERFAMILY SSF54211 2 169 1.67E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP3057 d419bb34517f188f81b8267571c3f633 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 4.8E-210 T 22-04-2016 IPR004482 Mg chelatase-related protein VP3057 d419bb34517f188f81b8267571c3f633 507 SMART SM00382 210 390 3.9E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VP3057 d419bb34517f188f81b8267571c3f633 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 2.3E-29 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain VP3057 d419bb34517f188f81b8267571c3f633 507 Gene3D G3DSA:3.30.230.10 6 153 7.4E-28 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP3057 d419bb34517f188f81b8267571c3f633 507 SUPERFAMILY SSF52540 188 501 3.54E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3057 d419bb34517f188f81b8267571c3f633 507 PANTHER PTHR32039:SF7 1 502 5.8E-263 T 22-04-2016 IPR004482 Mg chelatase-related protein VP3057 d419bb34517f188f81b8267571c3f633 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 5.3E-90 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain VP3057 d419bb34517f188f81b8267571c3f633 507 Gene3D G3DSA:3.40.50.300 189 385 6.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3057 d419bb34517f188f81b8267571c3f633 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VP3057 d419bb34517f188f81b8267571c3f633 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VP3057 d419bb34517f188f81b8267571c3f633 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VP3057 d419bb34517f188f81b8267571c3f633 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.1E-48 T 22-04-2016 VP3057 d419bb34517f188f81b8267571c3f633 507 PANTHER PTHR32039 1 502 5.8E-263 T 22-04-2016 VP1589 93e7d2dc5eb01e4333dd35fce18d5b50 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 2.0E-73 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VP1589 93e7d2dc5eb01e4333dd35fce18d5b50 149 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 1.7E-68 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VP1589 93e7d2dc5eb01e4333dd35fce18d5b50 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.935 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VP0595 d74f654e71a7ae54f0633884cb768475 168 PANTHER PTHR33221 2 152 6.4E-70 T 22-04-2016 VP0595 d74f654e71a7ae54f0633884cb768475 168 Pfam PF02082 Transcriptional regulator 1 83 9.5E-28 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type VP0595 d74f654e71a7ae54f0633884cb768475 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.2E-66 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VP0595 d74f654e71a7ae54f0633884cb768475 168 SUPERFAMILY SSF46785 2 133 1.61E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0595 d74f654e71a7ae54f0633884cb768475 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.2E-47 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type VP0595 d74f654e71a7ae54f0633884cb768475 168 PANTHER PTHR33221:SF1 2 152 6.4E-70 T 22-04-2016 VP0595 d74f654e71a7ae54f0633884cb768475 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site VP0595 d74f654e71a7ae54f0633884cb768475 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.46 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VP0595 d74f654e71a7ae54f0633884cb768475 168 Gene3D G3DSA:1.10.10.10 1 134 3.8E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2569 2b35520ca20f1e56e28f4db10d156875 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 6.7E-106 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VP2569 2b35520ca20f1e56e28f4db10d156875 243 SUPERFAMILY SSF63892 4 241 2.35E-102 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VP2569 2b35520ca20f1e56e28f4db10d156875 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 2.3E-100 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VP2569 2b35520ca20f1e56e28f4db10d156875 243 PANTHER PTHR30456 2 242 3.9E-148 T 22-04-2016 VP2569 2b35520ca20f1e56e28f4db10d156875 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.872 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VP2569 2b35520ca20f1e56e28f4db10d156875 243 Gene3D G3DSA:3.20.20.70 3 241 1.1E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2569 2b35520ca20f1e56e28f4db10d156875 243 PANTHER PTHR30456:SF0 2 242 3.9E-148 T 22-04-2016 VP0631 9bca657393ba96bf4ff9dcd0b43fc6e1 279 PANTHER PTHR37418 9 278 5.1E-25 T 22-04-2016 VP0631 9bca657393ba96bf4ff9dcd0b43fc6e1 279 Gene3D G3DSA:3.20.20.70 9 279 8.8E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0631 9bca657393ba96bf4ff9dcd0b43fc6e1 279 Pfam PF05853 beta-keto acid cleavage enzyme 11 279 1.8E-58 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 VP1237 6de72777db8f4bd311b9326ccfd6de63 548 PANTHER PTHR11999:SF5 42 193 6.0E-158 T 22-04-2016 VP1237 6de72777db8f4bd311b9326ccfd6de63 548 PANTHER PTHR11999:SF5 209 548 6.0E-158 T 22-04-2016 VP1237 6de72777db8f4bd311b9326ccfd6de63 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 5.7E-57 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VP1237 6de72777db8f4bd311b9326ccfd6de63 548 Gene3D G3DSA:3.90.1150.10 396 530 1.7E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1237 6de72777db8f4bd311b9326ccfd6de63 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.6E-301 T 22-04-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VP1237 6de72777db8f4bd311b9326ccfd6de63 548 SUPERFAMILY SSF53383 29 530 3.13E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1237 6de72777db8f4bd311b9326ccfd6de63 548 Gene3D G3DSA:3.40.640.10 116 395 2.4E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1237 6de72777db8f4bd311b9326ccfd6de63 548 PANTHER PTHR11999 42 193 6.0E-158 T 22-04-2016 VP1237 6de72777db8f4bd311b9326ccfd6de63 548 PANTHER PTHR11999 209 548 6.0E-158 T 22-04-2016 VP0292 55b3255bc5cbd7397ab87761b449ce96 302 PIRSF PIRSF002936 1 302 3.4E-156 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VP0292 55b3255bc5cbd7397ab87761b449ce96 302 PANTHER PTHR23293 245 302 6.2E-97 T 22-04-2016 VP0292 55b3255bc5cbd7397ab87761b449ce96 302 PANTHER PTHR23293 178 211 6.2E-97 T 22-04-2016 VP0292 55b3255bc5cbd7397ab87761b449ce96 302 PANTHER PTHR23293 1 158 6.2E-97 T 22-04-2016 VP0292 55b3255bc5cbd7397ab87761b449ce96 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.4E-164 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VP0292 55b3255bc5cbd7397ab87761b449ce96 302 SUPERFAMILY SSF52402 6 209 2.19E-74 T 22-04-2016 VP0292 55b3255bc5cbd7397ab87761b449ce96 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.5E-64 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VP0292 55b3255bc5cbd7397ab87761b449ce96 302 Gene3D G3DSA:3.40.50.620 244 253 5.9E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0292 55b3255bc5cbd7397ab87761b449ce96 302 Gene3D G3DSA:3.40.50.620 3 210 5.9E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0292 55b3255bc5cbd7397ab87761b449ce96 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.245 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VP2333 336cd22801a341936643ce88148778f6 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 2.9E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 PIRSF PIRSF001535 1 571 6.7E-265 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 Pfam PF03129 Anticodon binding domain 475 568 1.2E-21 T 22-04-2016 IPR004154 Anticodon-binding VP2333 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 PANTHER PTHR11451 4 244 2.4E-148 T 22-04-2016 VP2333 336cd22801a341936643ce88148778f6 571 PANTHER PTHR11451 399 571 2.4E-148 T 22-04-2016 VP2333 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.90.960.10 251 388 3.6E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.016 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF52954 463 570 3.32E-33 T 22-04-2016 IPR004154 Anticodon-binding VP2333 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF55826 218 390 6.8E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.40.50.800 472 571 1.5E-34 T 22-04-2016 IPR004154 Anticodon-binding VP2333 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF55681 407 478 1.24E-96 T 22-04-2016 VP2333 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF55681 10 237 1.24E-96 T 22-04-2016 VP2333 336cd22801a341936643ce88148778f6 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 4.8E-39 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP2333 336cd22801a341936643ce88148778f6 571 PANTHER PTHR11451:SF3 4 244 2.4E-148 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 PANTHER PTHR11451:SF3 399 571 2.4E-148 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.4E-245 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VP2333 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.30.930.10 389 471 3.1E-100 T 22-04-2016 VP2333 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.30.930.10 10 234 3.1E-100 T 22-04-2016 VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 PANTHER PTHR34388 1 332 3.5E-75 T 22-04-2016 VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 Gene3D G3DSA:1.20.272.20 223 334 1.0E-44 T 22-04-2016 VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 1.8E-102 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 SUPERFAMILY SSF48019 211 331 7.82E-31 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 Gene3D G3DSA:3.40.50.300 1 138 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 1.5E-31 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 Gene3D G3DSA:1.10.8.60 144 222 6.5E-32 T 22-04-2016 VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 1.7E-46 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VP0725 2837d776de0ae8465cbfc3fd805f75ee 339 SUPERFAMILY SSF52540 1 208 2.44E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0002 b227034422826e567de7db74e6362307 156 Pfam PF14849 YidC periplasmic domain 21 155 4.0E-37 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VPA0002 b227034422826e567de7db74e6362307 156 PRINTS PR00701 60kDa inner membrane protein signature 27 48 2.3E-16 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPA0002 b227034422826e567de7db74e6362307 156 PRINTS PR00701 60kDa inner membrane protein signature 117 137 2.3E-16 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPA0002 b227034422826e567de7db74e6362307 156 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 11 155 7.4E-42 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VP0216 fbabefe24e2d5b3c5ea12b64da0a830a 253 Pfam PF06251 Capsule biosynthesis GfcC 33 246 1.3E-19 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 VP1230 40b073b10092e21f49128e2ed0b9f880 760 Gene3D G3DSA:1.10.540.10 63 171 3.6E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VP1230 40b073b10092e21f49128e2ed0b9f880 760 PANTHER PTHR10909:SF283 32 474 4.0E-240 T 22-04-2016 VP1230 40b073b10092e21f49128e2ed0b9f880 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 1.9E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VP1230 40b073b10092e21f49128e2ed0b9f880 760 SUPERFAMILY SSF47203 301 453 1.26E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VP1230 40b073b10092e21f49128e2ed0b9f880 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.7E-8 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VP1230 40b073b10092e21f49128e2ed0b9f880 760 PANTHER PTHR10909 32 474 4.0E-240 T 22-04-2016 VP1230 40b073b10092e21f49128e2ed0b9f880 760 SUPERFAMILY SSF56645 61 296 7.07E-48 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VP1230 40b073b10092e21f49128e2ed0b9f880 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 4.2E-9 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 VP1230 40b073b10092e21f49128e2ed0b9f880 760 Gene3D G3DSA:1.20.140.10 290 448 7.2E-22 T 22-04-2016 VP1230 40b073b10092e21f49128e2ed0b9f880 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 1.3E-113 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VP1230 40b073b10092e21f49128e2ed0b9f880 760 Gene3D G3DSA:2.40.110.10 178 289 6.2E-18 T 22-04-2016 VP0907 89971eca42204765c117155b5c5fd152 934 SUPERFAMILY SSF49299 715 811 1.73E-6 T 22-04-2016 IPR000601 PKD domain VP0907 89971eca42204765c117155b5c5fd152 934 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 913 933 9.4E-5 T 22-04-2016 IPR020008 GlyGly-CTERM domain VP0907 89971eca42204765c117155b5c5fd152 934 Pfam PF05547 Immune inhibitor A peptidase M6 109 316 8.0E-15 T 22-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VP0907 89971eca42204765c117155b5c5fd152 934 ProSitePatterns PS00018 EF-hand calcium-binding domain. 187 199 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site VP0907 89971eca42204765c117155b5c5fd152 934 PIRSF PIRSF036597 1 934 0.0 T 22-04-2016 IPR012045 Peptidase M6, unassigned InhA-related VP0907 89971eca42204765c117155b5c5fd152 934 SUPERFAMILY SSF55486 232 298 1.51E-6 T 22-04-2016 VP0907 89971eca42204765c117155b5c5fd152 934 Gene3D G3DSA:3.40.390.10 228 313 2.5E-8 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VP0907 89971eca42204765c117155b5c5fd152 934 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 87 375 3.6E-74 T 22-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VP0907 89971eca42204765c117155b5c5fd152 934 SMART SM00089 719 811 5.2E-4 T 22-04-2016 IPR022409 PKD/Chitinase domain VP0512 3a8dde8798907cade291d2eb7064e39e 260 SUPERFAMILY SSF75620 2 257 3.01E-116 T 22-04-2016 VP0512 3a8dde8798907cade291d2eb7064e39e 260 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 258 3.7E-139 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VP0512 3a8dde8798907cade291d2eb7064e39e 260 Pfam PF00472 RF-1 domain 124 232 1.0E-38 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VP0512 3a8dde8798907cade291d2eb7064e39e 260 PANTHER PTHR11075:SF6 1 258 2.7E-138 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VP0512 3a8dde8798907cade291d2eb7064e39e 260 Pfam PF03462 PCRF domain 2 114 4.6E-44 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VP0512 3a8dde8798907cade291d2eb7064e39e 260 SMART SM00937 1 90 1.2E-37 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VP0512 3a8dde8798907cade291d2eb7064e39e 260 Gene3D G3DSA:3.30.160.20 123 201 5.4E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VP0512 3a8dde8798907cade291d2eb7064e39e 260 PANTHER PTHR11075 1 258 2.7E-138 T 22-04-2016 VP0512 3a8dde8798907cade291d2eb7064e39e 260 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 140 156 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VPA0149 37581de71e4be8288dd2788ce4207356 458 PANTHER PTHR30332:SF3 1 458 1.7E-195 T 22-04-2016 VPA0149 37581de71e4be8288dd2788ce4207356 458 Pfam PF00263 Bacterial type II and III secretion system protein 388 457 6.7E-14 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VPA0149 37581de71e4be8288dd2788ce4207356 458 PRINTS PR00811 Bacterial general secretion pathway protein D signature 281 291 3.3E-15 T 22-04-2016 IPR001775 GspD/PilQ family VPA0149 37581de71e4be8288dd2788ce4207356 458 PRINTS PR00811 Bacterial general secretion pathway protein D signature 419 429 3.3E-15 T 22-04-2016 IPR001775 GspD/PilQ family VPA0149 37581de71e4be8288dd2788ce4207356 458 PRINTS PR00811 Bacterial general secretion pathway protein D signature 384 408 3.3E-15 T 22-04-2016 IPR001775 GspD/PilQ family VPA0149 37581de71e4be8288dd2788ce4207356 458 Pfam PF03958 Bacterial type II/III secretion system short domain 62 123 5.4E-9 T 22-04-2016 IPR005644 NolW-like VPA0149 37581de71e4be8288dd2788ce4207356 458 Pfam PF03958 Bacterial type II/III secretion system short domain 128 195 4.5E-16 T 22-04-2016 IPR005644 NolW-like VPA0149 37581de71e4be8288dd2788ce4207356 458 Pfam PF03958 Bacterial type II/III secretion system short domain 203 281 1.2E-18 T 22-04-2016 IPR005644 NolW-like VPA0149 37581de71e4be8288dd2788ce4207356 458 PANTHER PTHR30332 1 458 1.7E-195 T 22-04-2016 VP2575 1feb011aad4605f6988e36775135e0b4 156 PANTHER PTHR35867 6 155 1.3E-28 T 22-04-2016 VP2575 1feb011aad4605f6988e36775135e0b4 156 PANTHER PTHR35867:SF1 6 155 1.3E-28 T 22-04-2016 VP2575 1feb011aad4605f6988e36775135e0b4 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 149 2.5E-32 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC VP2575 1feb011aad4605f6988e36775135e0b4 156 PIRSF PIRSF004923 1 156 1.5E-38 T 22-04-2016 IPR026268 Protein RseC VP1777 e129410e32be626966becba73909231e 369 Gene3D G3DSA:3.40.605.10 19 278 7.2E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP1777 e129410e32be626966becba73909231e 369 SUPERFAMILY SSF53720 7 363 3.4E-116 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP1777 e129410e32be626966becba73909231e 369 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VP1777 e129410e32be626966becba73909231e 369 PANTHER PTHR11699:SF210 1 363 2.7E-188 T 22-04-2016 VP1777 e129410e32be626966becba73909231e 369 PANTHER PTHR11699 1 363 2.7E-188 T 22-04-2016 VP1777 e129410e32be626966becba73909231e 369 Gene3D G3DSA:3.40.309.10 279 363 1.4E-27 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP1777 e129410e32be626966becba73909231e 369 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VP1777 e129410e32be626966becba73909231e 369 Pfam PF00171 Aldehyde dehydrogenase family 33 363 6.7E-116 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 Gene3D G3DSA:3.30.63.10 43 87 1.7E-30 T 22-04-2016 VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 PANTHER PTHR23117 1 200 7.9E-103 T 22-04-2016 VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 SMART SM00072 3 187 1.8E-77 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.177 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 PANTHER PTHR23117:SF13 1 200 7.9E-103 T 22-04-2016 VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 Pfam PF00625 Guanylate kinase 5 185 2.2E-63 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 SUPERFAMILY SSF52540 3 189 1.44E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.1E-76 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 Gene3D G3DSA:3.40.50.300 2 17 1.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 Gene3D G3DSA:3.40.50.300 88 203 1.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0161 391a8cefd8e7f026e58c2fe6686d748e 207 Gene3D G3DSA:3.40.50.300 18 42 6.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0755 61d62b14849093d2daaf92332852c3ce 883 SMART SM01081 34 195 1.4E-93 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VP0755 61d62b14849093d2daaf92332852c3ce 883 Gene3D G3DSA:3.30.379.10 207 329 6.4E-23 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VP0755 61d62b14849093d2daaf92332852c3ce 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 Gene3D G3DSA:3.20.20.80 330 832 1.9E-157 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP0755 61d62b14849093d2daaf92332852c3ce 883 SUPERFAMILY SSF81296 781 882 1.54E-36 T 22-04-2016 IPR014756 Immunoglobulin E-set VP0755 61d62b14849093d2daaf92332852c3ce 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 9.8E-109 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.6E-13 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VP0755 61d62b14849093d2daaf92332852c3ce 883 SUPERFAMILY SSF49384 26 198 9.42E-66 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 VP0755 61d62b14849093d2daaf92332852c3ce 883 PANTHER PTHR22600:SF12 567 774 5.6E-254 T 22-04-2016 VP0755 61d62b14849093d2daaf92332852c3ce 883 PANTHER PTHR22600:SF12 151 392 5.6E-254 T 22-04-2016 VP0755 61d62b14849093d2daaf92332852c3ce 883 PANTHER PTHR22600:SF12 792 882 5.6E-254 T 22-04-2016 VP0755 61d62b14849093d2daaf92332852c3ce 883 PANTHER PTHR22600:SF12 415 538 5.6E-254 T 22-04-2016 VP0755 61d62b14849093d2daaf92332852c3ce 883 Gene3D G3DSA:2.60.40.290 26 167 6.9E-62 T 22-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 VP0755 61d62b14849093d2daaf92332852c3ce 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 2.7E-62 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VP0755 61d62b14849093d2daaf92332852c3ce 883 PANTHER PTHR22600 567 774 5.6E-254 T 22-04-2016 VP0755 61d62b14849093d2daaf92332852c3ce 883 PANTHER PTHR22600 151 392 5.6E-254 T 22-04-2016 VP0755 61d62b14849093d2daaf92332852c3ce 883 PANTHER PTHR22600 792 882 5.6E-254 T 22-04-2016 VP0755 61d62b14849093d2daaf92332852c3ce 883 PANTHER PTHR22600 415 538 5.6E-254 T 22-04-2016 VP0755 61d62b14849093d2daaf92332852c3ce 883 SUPERFAMILY SSF55545 208 331 7.63E-23 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VP0755 61d62b14849093d2daaf92332852c3ce 883 Gene3D G3DSA:2.60.40.320 833 882 6.5E-27 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VP0755 61d62b14849093d2daaf92332852c3ce 883 SUPERFAMILY SSF51445 332 772 2.82E-143 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP0755 61d62b14849093d2daaf92332852c3ce 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 1.3E-27 T 22-04-2016 VP2279 f665c013110d751e0f7a9aa54b636556 116 PANTHER PTHR30041:SF4 1 116 2.4E-64 T 22-04-2016 VP2279 f665c013110d751e0f7a9aa54b636556 116 Pfam PF03960 ArsC family 6 115 4.0E-20 T 22-04-2016 IPR006660 Arsenate reductase-like VP2279 f665c013110d751e0f7a9aa54b636556 116 PANTHER PTHR30041 1 116 2.4E-64 T 22-04-2016 VP2279 f665c013110d751e0f7a9aa54b636556 116 SUPERFAMILY SSF52833 2 116 2.01E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2279 f665c013110d751e0f7a9aa54b636556 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 5.1E-48 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VP2279 f665c013110d751e0f7a9aa54b636556 116 Gene3D G3DSA:3.40.30.10 1 116 4.2E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2927 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VP2927 be626520ea85999f320d5624563e5a1f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VP2927 be626520ea85999f320d5624563e5a1f 182 SMART SM00739 127 154 3.9E-4 T 22-04-2016 IPR005824 KOW VP2927 be626520ea85999f320d5624563e5a1f 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.3E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VP2927 be626520ea85999f320d5624563e5a1f 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.2E-70 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VP2927 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain VP2927 be626520ea85999f320d5624563e5a1f 182 SMART SM00738 6 115 1.0E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VP2927 be626520ea85999f320d5624563e5a1f 182 Pfam PF00467 KOW motif 131 162 3.7E-7 T 22-04-2016 IPR005824 KOW VP2927 be626520ea85999f320d5624563e5a1f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.932 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VP2927 be626520ea85999f320d5624563e5a1f 182 PANTHER PTHR30265 3 182 1.1E-84 T 22-04-2016 VP2927 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:2.30.30.30 120 181 8.9E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VP2927 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VP2927 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VP2927 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VP2927 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:3.30.70.940 6 117 5.5E-44 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VP0291 4b851e2d81e436b3e809b0c7e1d06a1a 304 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 55 69 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VP0291 4b851e2d81e436b3e809b0c7e1d06a1a 304 Gene3D G3DSA:3.40.1010.10 49 165 5.7E-47 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VP0291 4b851e2d81e436b3e809b0c7e1d06a1a 304 PANTHER PTHR21091 1 284 1.7E-82 T 22-04-2016 VP0291 4b851e2d81e436b3e809b0c7e1d06a1a 304 SUPERFAMILY SSF53790 46 292 6.94E-80 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VP0291 4b851e2d81e436b3e809b0c7e1d06a1a 304 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 52 261 3.8E-46 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VP0291 4b851e2d81e436b3e809b0c7e1d06a1a 304 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 50 283 1.6E-93 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VP0291 4b851e2d81e436b3e809b0c7e1d06a1a 304 Gene3D G3DSA:3.30.950.10 166 298 2.6E-47 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VP0291 4b851e2d81e436b3e809b0c7e1d06a1a 304 PANTHER PTHR21091:SF16 1 284 1.7E-82 T 22-04-2016 VP2212 066fcb07b268f1fcb0ddd7527d603efd 416 SUPERFAMILY SSF56935 27 416 9.61E-90 T 22-04-2016 VP2212 066fcb07b268f1fcb0ddd7527d603efd 416 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 416 1.2E-118 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VP2212 066fcb07b268f1fcb0ddd7527d603efd 416 PANTHER PTHR35093:SF1 4 416 2.1E-231 T 22-04-2016 VP2212 066fcb07b268f1fcb0ddd7527d603efd 416 PANTHER PTHR35093 4 416 2.1E-231 T 22-04-2016 VP2212 066fcb07b268f1fcb0ddd7527d603efd 416 Gene3D G3DSA:2.40.160.60 26 416 4.8E-124 T 22-04-2016 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 SUPERFAMILY SSF56235 87 513 8.49E-153 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 SUPERFAMILY SSF69336 1301 1564 5.36E-95 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 Gene3D G3DSA:2.160.20.60 1307 1575 1.4E-107 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 Pfam PF04898 Glutamate synthase central domain 538 822 2.2E-117 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 Pfam PF00310 Glutamine amidotransferases class-II 87 509 1.3E-184 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 Gene3D G3DSA:3.60.20.10 87 519 8.7E-183 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 SUPERFAMILY SSF51395 518 1287 1.76E-268 T 22-04-2016 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 Gene3D G3DSA:3.20.20.70 520 872 3.1E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 Pfam PF01493 GXGXG motif 1333 1518 6.8E-84 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 PANTHER PTHR11938 76 1568 0.0 T 22-04-2016 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 Gene3D G3DSA:3.20.20.70 897 1289 7.8E-179 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 PANTHER PTHR11938:SF1 76 1568 0.0 T 22-04-2016 VP0484 fa1f29e7cbe1c0a684056355329c150d 1583 Pfam PF01645 Conserved region in glutamate synthase 883 1253 1.2E-150 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VP0697 0f46cd27b73988107c853cd894deea03 260 SUPERFAMILY SSF47807 165 257 2.99E-21 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VP0697 0f46cd27b73988107c853cd894deea03 260 SMART SM00475 3 254 4.9E-72 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VP0697 0f46cd27b73988107c853cd894deea03 260 Gene3D G3DSA:1.10.150.20 180 239 2.4E-20 T 22-04-2016 VP0697 0f46cd27b73988107c853cd894deea03 260 PANTHER PTHR10133 1 253 3.7E-154 T 22-04-2016 VP0697 0f46cd27b73988107c853cd894deea03 260 SMART SM00279 167 202 7.7E-10 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VP0697 0f46cd27b73988107c853cd894deea03 260 Gene3D G3DSA:3.40.50.1010 4 179 7.1E-49 T 22-04-2016 IPR029060 PIN domain-like VP0697 0f46cd27b73988107c853cd894deea03 260 SUPERFAMILY SSF88723 4 164 1.03E-39 T 22-04-2016 IPR029060 PIN domain-like VP0697 0f46cd27b73988107c853cd894deea03 260 PANTHER PTHR10133:SF39 1 253 3.7E-154 T 22-04-2016 VP0697 0f46cd27b73988107c853cd894deea03 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 3.1E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VP0697 0f46cd27b73988107c853cd894deea03 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 2.1E-31 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VP0697 0f46cd27b73988107c853cd894deea03 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.947 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 VP3079 d732107dd41fb44e867f74c1060d4dde 211 SUPERFAMILY SSF53335 8 209 3.38E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP3079 d732107dd41fb44e867f74c1060d4dde 211 PANTHER PTHR31760 1 211 2.1E-82 T 22-04-2016 VP3079 d732107dd41fb44e867f74c1060d4dde 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.3E-57 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VP3079 d732107dd41fb44e867f74c1060d4dde 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 4.4E-63 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VP3079 d732107dd41fb44e867f74c1060d4dde 211 PANTHER PTHR31760:SF0 1 211 2.1E-82 T 22-04-2016 VP3079 d732107dd41fb44e867f74c1060d4dde 211 PIRSF PIRSF003078 2 211 2.0E-58 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VP3079 d732107dd41fb44e867f74c1060d4dde 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.571 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VP3079 d732107dd41fb44e867f74c1060d4dde 211 Gene3D G3DSA:3.40.50.150 7 210 6.8E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1754 077eb571646f0d83e5be1120b3cd0e50 719 Pfam PF00563 EAL domain 458 694 1.4E-70 T 22-04-2016 IPR001633 EAL domain VP1754 077eb571646f0d83e5be1120b3cd0e50 719 SMART SM00304 219 270 0.0012 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1754 077eb571646f0d83e5be1120b3cd0e50 719 SMART SM00267 265 442 9.8E-29 T 22-04-2016 IPR000160 GGDEF domain VP1754 077eb571646f0d83e5be1120b3cd0e50 719 SMART SM00052 452 699 1.1E-105 T 22-04-2016 IPR001633 EAL domain VP1754 077eb571646f0d83e5be1120b3cd0e50 719 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 441 3.3E-28 T 22-04-2016 IPR000160 GGDEF domain VP1754 077eb571646f0d83e5be1120b3cd0e50 719 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 436 2.4E-29 T 22-04-2016 IPR000160 GGDEF domain VP1754 077eb571646f0d83e5be1120b3cd0e50 719 SUPERFAMILY SSF55073 281 444 2.04E-33 T 22-04-2016 IPR029787 Nucleotide cyclase VP1754 077eb571646f0d83e5be1120b3cd0e50 719 Pfam PF00672 HAMP domain 199 265 3.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1754 077eb571646f0d83e5be1120b3cd0e50 719 SUPERFAMILY SSF141868 466 705 1.09E-82 T 22-04-2016 IPR001633 EAL domain VP1754 077eb571646f0d83e5be1120b3cd0e50 719 Gene3D G3DSA:3.20.20.450 456 703 1.6E-88 T 22-04-2016 IPR001633 EAL domain VP1754 077eb571646f0d83e5be1120b3cd0e50 719 Gene3D G3DSA:3.30.70.270 277 448 5.5E-40 T 22-04-2016 VP1754 077eb571646f0d83e5be1120b3cd0e50 719 PANTHER PTHR33121 404 700 1.0E-67 T 22-04-2016 VP1754 077eb571646f0d83e5be1120b3cd0e50 719 PANTHER PTHR33121 125 144 1.0E-67 T 22-04-2016 VP1754 077eb571646f0d83e5be1120b3cd0e50 719 PANTHER PTHR33121:SF13 404 700 1.0E-67 T 22-04-2016 VP1754 077eb571646f0d83e5be1120b3cd0e50 719 PANTHER PTHR33121:SF13 125 144 1.0E-67 T 22-04-2016 VP0165 25b4b38bc266da9b422f96ad7903882a 175 PANTHER PTHR30625:SF0 74 175 7.6E-23 T 22-04-2016 VP0165 25b4b38bc266da9b422f96ad7903882a 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 168 2.3E-20 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VP0165 25b4b38bc266da9b422f96ad7903882a 175 PANTHER PTHR30625 74 175 7.6E-23 T 22-04-2016 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 PANTHER PTHR10937 1 610 0.0 T 22-04-2016 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 SUPERFAMILY SSF56235 2 234 2.23E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.336 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.1E-257 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.40.50.10490 245 446 1.3E-66 T 22-04-2016 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF01380 SIS domain 290 418 2.2E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF01380 SIS domain 463 592 8.7E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 PANTHER PTHR10937:SF0 1 610 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 7.1E-22 T 22-04-2016 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.40.50.10490 447 610 3.9E-65 T 22-04-2016 VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.60.20.10 2 237 2.3E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0359 5b7c430e4dee7f230732ac88d62ee3ad 610 SUPERFAMILY SSF53697 245 610 1.58E-113 T 22-04-2016 VP0838 c212fb7931d7a0dfd8680b8aad92495a 180 Gene3D G3DSA:1.10.1220.10 1 38 3.3E-26 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VP0838 c212fb7931d7a0dfd8680b8aad92495a 180 Gene3D G3DSA:1.20.1380.10 68 180 3.0E-51 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VP0838 c212fb7931d7a0dfd8680b8aad92495a 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 9.6E-47 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VP0838 c212fb7931d7a0dfd8680b8aad92495a 180 PIRSF PIRSF019401 1 180 4.5E-54 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 VP0838 c212fb7931d7a0dfd8680b8aad92495a 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 41.771 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 VP0838 c212fb7931d7a0dfd8680b8aad92495a 180 SUPERFAMILY SSF47598 1 35 4.67E-14 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VP0838 c212fb7931d7a0dfd8680b8aad92495a 180 SUPERFAMILY SSF82808 67 179 2.48E-49 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VP1476 b867bb863be71332b793d6659f213083 106 SUPERFAMILY SSF52091 6 101 7.46E-20 T 22-04-2016 IPR002645 STAS domain VP1476 b867bb863be71332b793d6659f213083 106 Pfam PF13466 STAS domain 17 95 1.4E-9 T 22-04-2016 IPR002645 STAS domain VP1476 b867bb863be71332b793d6659f213083 106 Gene3D G3DSA:3.30.750.24 6 102 5.8E-21 T 22-04-2016 IPR002645 STAS domain VP0258 2d175bb8a55ff69ba74ee7ff553af54c 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.4E-76 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VP0258 2d175bb8a55ff69ba74ee7ff553af54c 200 PANTHER PTHR10746 10 199 1.4E-92 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VP0258 2d175bb8a55ff69ba74ee7ff553af54c 200 SUPERFAMILY SSF52166 9 199 4.06E-73 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VP0258 2d175bb8a55ff69ba74ee7ff553af54c 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VP0258 2d175bb8a55ff69ba74ee7ff553af54c 200 Gene3D G3DSA:3.40.1370.10 52 200 9.8E-60 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VP0258 2d175bb8a55ff69ba74ee7ff553af54c 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.872 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VP1964 e8049b188c77d549cbbce4719eca1175 513 Gene3D G3DSA:3.30.300.30 411 508 6.5E-31 T 22-04-2016 VP1964 e8049b188c77d549cbbce4719eca1175 513 Pfam PF00501 AMP-binding enzyme 8 416 5.2E-114 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP1964 e8049b188c77d549cbbce4719eca1175 513 SUPERFAMILY SSF56801 4 509 6.28E-160 T 22-04-2016 VP1964 e8049b188c77d549cbbce4719eca1175 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 3.7E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VP1964 e8049b188c77d549cbbce4719eca1175 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 22-04-2016 IPR020845 AMP-binding, conserved site VP1964 e8049b188c77d549cbbce4719eca1175 513 Gene3D G3DSA:3.40.50.980 178 336 1.0E-48 T 22-04-2016 VP1964 e8049b188c77d549cbbce4719eca1175 513 Gene3D G3DSA:2.30.38.10 337 407 4.1E-29 T 22-04-2016 VP1964 e8049b188c77d549cbbce4719eca1175 513 PANTHER PTHR24096 2 507 3.5E-178 T 22-04-2016 VP1964 e8049b188c77d549cbbce4719eca1175 513 Gene3D G3DSA:3.40.50.980 4 177 3.2E-35 T 22-04-2016 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 Gene3D G3DSA:3.30.465.10 110 277 2.8E-40 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 4.9E-62 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 Gene3D G3DSA:3.30.43.10 3 109 6.1E-28 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 PANTHER PTHR11748 17 194 6.3E-176 T 22-04-2016 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 PANTHER PTHR11748 242 582 6.3E-176 T 22-04-2016 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 Pfam PF01565 FAD binding domain 52 191 1.4E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 SUPERFAMILY SSF55103 252 538 5.56E-53 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 PANTHER PTHR11748:SF35 17 194 6.3E-176 T 22-04-2016 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 PANTHER PTHR11748:SF35 242 582 6.3E-176 T 22-04-2016 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 Pfam PF13183 4Fe-4S dicluster domain 570 681 3.6E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1270 79844972b069ee75f42bbcf5c49194d6 1012 Gene3D G3DSA:1.10.1060.10 646 695 6.0E-14 T 22-04-2016 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 Gene3D G3DSA:1.10.1060.10 511 614 6.0E-14 T 22-04-2016 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1270 79844972b069ee75f42bbcf5c49194d6 1012 SUPERFAMILY SSF56176 235 277 9.4E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 SUPERFAMILY SSF56176 24 192 9.4E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 SUPERFAMILY SSF46548 649 685 5.1E-7 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP1270 79844972b069ee75f42bbcf5c49194d6 1012 SUPERFAMILY SSF46548 571 617 5.1E-7 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP1469 151434d896afd39fea3976444b0b9180 514 SMART SM00382 162 304 3.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1469 151434d896afd39fea3976444b0b9180 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP1469 151434d896afd39fea3976444b0b9180 514 Pfam PF00072 Response regulator receiver domain 5 114 3.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1469 151434d896afd39fea3976444b0b9180 514 SUPERFAMILY SSF52540 142 385 8.44E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1469 151434d896afd39fea3976444b0b9180 514 SUPERFAMILY SSF52172 3 186 1.18E-36 T 22-04-2016 IPR011006 CheY-like superfamily VP1469 151434d896afd39fea3976444b0b9180 514 Gene3D G3DSA:1.10.10.60 459 500 7.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1469 151434d896afd39fea3976444b0b9180 514 PANTHER PTHR32071 1 393 2.1E-174 T 22-04-2016 VP1469 151434d896afd39fea3976444b0b9180 514 PANTHER PTHR32071 426 508 2.1E-174 T 22-04-2016 VP1469 151434d896afd39fea3976444b0b9180 514 PANTHER PTHR32071:SF33 1 393 2.1E-174 T 22-04-2016 VP1469 151434d896afd39fea3976444b0b9180 514 PANTHER PTHR32071:SF33 426 508 2.1E-174 T 22-04-2016 VP1469 151434d896afd39fea3976444b0b9180 514 Gene3D G3DSA:3.40.50.2300 2 124 8.5E-30 T 22-04-2016 VP1469 151434d896afd39fea3976444b0b9180 514 SMART SM00448 3 114 9.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1469 151434d896afd39fea3976444b0b9180 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP1469 151434d896afd39fea3976444b0b9180 514 Gene3D G3DSA:3.40.50.300 139 314 2.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1469 151434d896afd39fea3976444b0b9180 514 Pfam PF00158 Sigma-54 interaction domain 143 308 1.0E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP1469 151434d896afd39fea3976444b0b9180 514 SUPERFAMILY SSF46689 457 505 4.44E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1469 151434d896afd39fea3976444b0b9180 514 Pfam PF02954 Bacterial regulatory protein, Fis family 464 500 2.8E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP1469 151434d896afd39fea3976444b0b9180 514 Gene3D G3DSA:1.10.8.60 315 393 8.5E-24 T 22-04-2016 VP1268 d4557b6e321b905dc0a84f43d0686a9a 231 PIRSF PIRSF028111 1 230 8.6E-85 T 22-04-2016 IPR016868 Bacteriophage B3, Orf5 VP1268 d4557b6e321b905dc0a84f43d0686a9a 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-12 T 22-04-2016 IPR024498 Domain of unknown function DUF2786 VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 Pfam PF00158 Sigma-54 interaction domain 1 144 1.2E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 PANTHER PTHR32071:SF15 1 250 1.0E-147 T 22-04-2016 VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 Gene3D G3DSA:3.40.50.300 1 150 1.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 PANTHER PTHR32071 1 250 1.0E-147 T 22-04-2016 VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 64 79 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 2 15 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 SUPERFAMILY SSF52540 1 221 3.27E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 Gene3D G3DSA:1.10.8.60 151 228 6.4E-23 T 22-04-2016 VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 SMART SM00382 1 152 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VPA0135 84b5daf620cfb22a02f69a325fe24a44 252 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 191 200 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 Gene3D G3DSA:3.40.50.1980 17 180 3.1E-46 T 22-04-2016 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 PANTHER PTHR30477 4 275 8.0E-72 T 22-04-2016 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 PRINTS PR00690 Adhesin family signature 179 200 5.3E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 PRINTS PR00690 Adhesin family signature 232 250 5.3E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 PRINTS PR00690 Adhesin family signature 50 63 5.3E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 PRINTS PR00690 Adhesin family signature 63 80 5.3E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 SUPERFAMILY SSF53807 12 290 1.03E-76 T 22-04-2016 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 1.1E-60 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 PANTHER PTHR30477:SF1 4 275 8.0E-72 T 22-04-2016 VP0853 c9a61152f96c49165de2ca0fba97c2b8 292 Gene3D G3DSA:3.40.50.1980 181 291 3.7E-26 T 22-04-2016 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 SUPERFAMILY SSF47323 316 459 2.09E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 PANTHER PTHR10890 1 459 2.2E-254 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 Pfam PF09190 DALR domain 341 402 6.4E-25 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 2.5E-191 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 Gene3D G3DSA:1.20.120.640 306 392 1.7E-27 T 22-04-2016 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 7.3E-141 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 Gene3D G3DSA:3.40.50.620 20 305 2.4E-112 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 SMART SM00840 341 402 1.4E-28 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.294 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VP1150 cf9e6df6dddbd8279549d4d990226ec2 460 SUPERFAMILY SSF52374 1 313 2.25E-103 T 22-04-2016 VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 37 475 3.8E-141 T 22-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 PANTHER PTHR30600:SF4 260 475 3.5E-161 T 22-04-2016 VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 PANTHER PTHR30600:SF4 39 112 3.5E-161 T 22-04-2016 VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 PANTHER PTHR30600 260 475 3.5E-161 T 22-04-2016 VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 PANTHER PTHR30600:SF4 187 235 3.5E-161 T 22-04-2016 VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 PIRSF PIRSF028099 7 475 5.4E-185 T 22-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 PANTHER PTHR30600 187 235 3.5E-161 T 22-04-2016 VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 PANTHER PTHR30600 39 112 3.5E-161 T 22-04-2016 VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 Gene3D G3DSA:1.10.760.10 338 475 3.2E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1919 c2d23f3f54ab9914abca8af46cf0e2e7 475 SUPERFAMILY SSF46626 334 475 7.8E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1310 68285fac941eb9d48aed3bbd20e19a80 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 134.808 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VP1310 68285fac941eb9d48aed3bbd20e19a80 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 7.3E-70 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VP1310 68285fac941eb9d48aed3bbd20e19a80 342 PANTHER PTHR15162 1 334 1.4E-58 T 22-04-2016 VP1310 68285fac941eb9d48aed3bbd20e19a80 342 PIRSF PIRSF017020 4 336 3.8E-127 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VP1310 68285fac941eb9d48aed3bbd20e19a80 342 SUPERFAMILY SSF53187 9 329 6.28E-77 T 22-04-2016 VP1310 68285fac941eb9d48aed3bbd20e19a80 342 Gene3D G3DSA:3.40.630.10 51 241 4.6E-9 T 22-04-2016 VP1426 a73ca2f800716d2886d75227101f0e42 401 PANTHER PTHR32195:SF17 1 397 1.2E-185 T 22-04-2016 VP1426 a73ca2f800716d2886d75227101f0e42 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 4.0E-110 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VP1426 a73ca2f800716d2886d75227101f0e42 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 383 2.9E-109 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VP1426 a73ca2f800716d2886d75227101f0e42 401 PANTHER PTHR32195 1 397 1.2E-185 T 22-04-2016 VP1426 a73ca2f800716d2886d75227101f0e42 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP1426 a73ca2f800716d2886d75227101f0e42 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.0E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VP2371 3252789cee0be81f8b14e4e0cd263587 445 PANTHER PTHR30602:SF3 1 445 6.2E-284 T 22-04-2016 VP2371 3252789cee0be81f8b14e4e0cd263587 445 PIRSF PIRSF000423 1 445 3.4E-204 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VP2371 3252789cee0be81f8b14e4e0cd263587 445 SUPERFAMILY SSF55729 300 425 1.66E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2371 3252789cee0be81f8b14e4e0cd263587 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 5.5E-201 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VP2371 3252789cee0be81f8b14e4e0cd263587 445 Gene3D G3DSA:3.40.1160.10 23 294 9.6E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2371 3252789cee0be81f8b14e4e0cd263587 445 Gene3D G3DSA:3.40.630.30 298 441 1.5E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2371 3252789cee0be81f8b14e4e0cd263587 445 PANTHER PTHR30602 1 445 6.2E-284 T 22-04-2016 VP2371 3252789cee0be81f8b14e4e0cd263587 445 Pfam PF00583 Acetyltransferase (GNAT) family 344 416 5.9E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2371 3252789cee0be81f8b14e4e0cd263587 445 Pfam PF00696 Amino acid kinase family 25 270 2.7E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2371 3252789cee0be81f8b14e4e0cd263587 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.769 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VP2371 3252789cee0be81f8b14e4e0cd263587 445 SUPERFAMILY SSF53633 4 294 1.96E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP0436 e5ee8e86042f5152c22c1f22a3cd8c59 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 52.787 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VP0436 e5ee8e86042f5152c22c1f22a3cd8c59 367 Gene3D G3DSA:3.40.50.300 15 177 3.8E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0436 e5ee8e86042f5152c22c1f22a3cd8c59 367 SUPERFAMILY SSF52540 62 200 1.16E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0436 e5ee8e86042f5152c22c1f22a3cd8c59 367 PANTHER PTHR12169 1 366 4.5E-179 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VP0436 e5ee8e86042f5152c22c1f22a3cd8c59 367 PANTHER PTHR12169:SF11 1 366 4.5E-179 T 22-04-2016 VP0436 e5ee8e86042f5152c22c1f22a3cd8c59 367 Pfam PF03969 AFG1-like ATPase 1 364 1.0E-152 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 Gene3D G3DSA:1.20.1560.10 7 319 2.9E-72 T 22-04-2016 VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 PANTHER PTHR24221 1 579 2.9E-176 T 22-04-2016 VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 SUPERFAMILY SSF52540 338 571 7.89E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 Gene3D G3DSA:3.40.50.300 343 565 1.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 Pfam PF00664 ABC transporter transmembrane region 21 291 1.8E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 Pfam PF00005 ABC transporter 353 500 6.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 SUPERFAMILY SSF90123 7 320 3.4E-74 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1432 668c910e6b62ecd6e3b6a1264dd5ba37 579 SMART SM00382 361 547 2.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2138 5e1949b540ab731992c7e9e64b494c91 339 SUPERFAMILY SSF57997 124 333 7.19E-8 T 22-04-2016 VP2138 5e1949b540ab731992c7e9e64b494c91 339 Pfam PF11740 Plasmid replication region DNA-binding N-term 12 170 6.2E-6 T 22-04-2016 IPR021104 KfrA, N-terminal DNA-binding domain VP2138 5e1949b540ab731992c7e9e64b494c91 339 Gene3D G3DSA:1.20.1170.10 147 309 4.6E-4 T 22-04-2016 VP1549 05feac70db1e189a7678254293c827ed 122 Gene3D G3DSA:1.10.260.40 19 56 9.9E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1549 05feac70db1e189a7678254293c827ed 122 Pfam PF12472 Phage related protein 63 119 2.4E-20 T 22-04-2016 IPR021096 Vibrio phage VSK, Orf152 VP2978 fc9b8cec3ee4473cf425b0cb09d127bb 204 PANTHER PTHR21392 5 204 4.6E-43 T 22-04-2016 VP2978 fc9b8cec3ee4473cf425b0cb09d127bb 204 Pfam PF03942 DTW domain 5 183 9.6E-43 T 22-04-2016 IPR005636 DTW VP2978 fc9b8cec3ee4473cf425b0cb09d127bb 204 SMART SM01144 1 192 9.4E-54 T 22-04-2016 IPR005636 DTW VP2978 fc9b8cec3ee4473cf425b0cb09d127bb 204 PANTHER PTHR21392:SF1 5 204 4.6E-43 T 22-04-2016 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 Gene3D G3DSA:3.50.50.60 469 620 7.4E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 Gene3D G3DSA:3.50.50.60 359 462 1.5E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 1.8E-82 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 Gene3D G3DSA:3.20.20.70 1 358 2.1E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 627 4.3E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 PANTHER PTHR22893 2 416 4.7E-245 T 22-04-2016 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 SUPERFAMILY SSF51971 551 622 6.47E-42 T 22-04-2016 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 SUPERFAMILY SSF51971 373 518 6.47E-42 T 22-04-2016 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 PANTHER PTHR22893:SF25 2 416 4.7E-245 T 22-04-2016 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 1.4E-9 T 22-04-2016 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 1.4E-9 T 22-04-2016 VP2151 997b378eec7a7b0ab0dd4ce89d7a27a5 667 SUPERFAMILY SSF51395 2 361 4.15E-108 T 22-04-2016 VP0361 4f76daacb533439db1b80e2f1901d211 230 PANTHER PTHR26402:SF575 1 225 1.9E-97 T 22-04-2016 VP0361 4f76daacb533439db1b80e2f1901d211 230 SUPERFAMILY SSF52172 2 117 8.11E-38 T 22-04-2016 IPR011006 CheY-like superfamily VP0361 4f76daacb533439db1b80e2f1901d211 230 SMART SM00862 149 224 8.5E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0361 4f76daacb533439db1b80e2f1901d211 230 Gene3D G3DSA:3.40.50.2300 2 119 2.0E-37 T 22-04-2016 VP0361 4f76daacb533439db1b80e2f1901d211 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 8.7E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0361 4f76daacb533439db1b80e2f1901d211 230 Pfam PF00072 Response regulator receiver domain 3 113 2.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0361 4f76daacb533439db1b80e2f1901d211 230 SMART SM00448 1 112 3.4E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0361 4f76daacb533439db1b80e2f1901d211 230 Gene3D G3DSA:1.10.10.10 127 226 4.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0361 4f76daacb533439db1b80e2f1901d211 230 PANTHER PTHR26402 1 225 1.9E-97 T 22-04-2016 VP0361 4f76daacb533439db1b80e2f1901d211 230 SUPERFAMILY SSF46894 127 225 3.97E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP0361 4f76daacb533439db1b80e2f1901d211 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 1.5E-99 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 VP2274 12a44dac49b3b54c7ffa24125afeed2c 180 Gene3D G3DSA:3.30.70.260 88 178 5.5E-38 T 22-04-2016 VP2274 12a44dac49b3b54c7ffa24125afeed2c 180 PIRSF PIRSF028103 1 178 2.4E-70 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VP2274 12a44dac49b3b54c7ffa24125afeed2c 180 SUPERFAMILY SSF55021 1 82 2.14E-18 T 22-04-2016 VP2274 12a44dac49b3b54c7ffa24125afeed2c 180 PANTHER PTHR34875:SF3 1 179 9.9E-59 T 22-04-2016 VP2274 12a44dac49b3b54c7ffa24125afeed2c 180 Gene3D G3DSA:3.30.70.260 1 83 9.6E-28 T 22-04-2016 VP2274 12a44dac49b3b54c7ffa24125afeed2c 180 Pfam PF13740 ACT domain 3 78 1.4E-23 T 22-04-2016 VP2274 12a44dac49b3b54c7ffa24125afeed2c 180 SUPERFAMILY SSF55021 90 176 1.07E-21 T 22-04-2016 VP2274 12a44dac49b3b54c7ffa24125afeed2c 180 PANTHER PTHR34875 1 179 9.9E-59 T 22-04-2016 VP2778 dda2b71b7f8372a8f92bc7c4143295fd 260 PANTHER PTHR10516 134 255 1.5E-52 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VP2778 dda2b71b7f8372a8f92bc7c4143295fd 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.3E-29 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VP2778 dda2b71b7f8372a8f92bc7c4143295fd 260 Gene3D G3DSA:3.10.50.40 147 257 4.0E-47 T 22-04-2016 VP2778 dda2b71b7f8372a8f92bc7c4143295fd 260 SUPERFAMILY SSF54534 46 253 2.95E-64 T 22-04-2016 VP2778 dda2b71b7f8372a8f92bc7c4143295fd 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 6.8E-34 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VP2778 dda2b71b7f8372a8f92bc7c4143295fd 260 Gene3D G3DSA:1.10.287.460 40 146 1.6E-37 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VP0133 54b4792bb09f740001205e334ab3ec63 675 PRINTS PR01032 Gene IV protein signature 472 495 8.2E-13 T 22-04-2016 VP0133 54b4792bb09f740001205e334ab3ec63 675 PRINTS PR01032 Gene IV protein signature 540 568 8.2E-13 T 22-04-2016 VP0133 54b4792bb09f740001205e334ab3ec63 675 PRINTS PR01032 Gene IV protein signature 593 615 8.2E-13 T 22-04-2016 VP0133 54b4792bb09f740001205e334ab3ec63 675 Pfam PF00263 Bacterial type II and III secretion system protein 451 613 6.1E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VP0133 54b4792bb09f740001205e334ab3ec63 675 PANTHER PTHR30332:SF3 25 648 3.2E-286 T 22-04-2016 VP0133 54b4792bb09f740001205e334ab3ec63 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 471 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VP0133 54b4792bb09f740001205e334ab3ec63 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VP0133 54b4792bb09f740001205e334ab3ec63 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 600 614 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VP0133 54b4792bb09f740001205e334ab3ec63 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 492 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VP0133 54b4792bb09f740001205e334ab3ec63 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 577 595 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VP0133 54b4792bb09f740001205e334ab3ec63 675 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 622 1.9E-158 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VP0133 54b4792bb09f740001205e334ab3ec63 675 PANTHER PTHR30332 25 648 3.2E-286 T 22-04-2016 VP0133 54b4792bb09f740001205e334ab3ec63 675 Pfam PF03958 Bacterial type II/III secretion system short domain 266 344 2.1E-18 T 22-04-2016 IPR005644 NolW-like VP0133 54b4792bb09f740001205e334ab3ec63 675 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 9.2E-9 T 22-04-2016 IPR005644 NolW-like VP0133 54b4792bb09f740001205e334ab3ec63 675 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 7.8E-16 T 22-04-2016 IPR005644 NolW-like VP0133 54b4792bb09f740001205e334ab3ec63 675 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 558 591 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VP2307 69a09577fda3e6707d98935ae56c2fd3 150 PANTHER PTHR30272 1 150 3.8E-82 T 22-04-2016 VP2307 69a09577fda3e6707d98935ae56c2fd3 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.564 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VP2307 69a09577fda3e6707d98935ae56c2fd3 150 SUPERFAMILY SSF54637 7 146 1.34E-48 T 22-04-2016 IPR029069 HotDog domain VP2307 69a09577fda3e6707d98935ae56c2fd3 150 Gene3D G3DSA:3.10.129.10 3 147 5.6E-58 T 22-04-2016 IPR029069 HotDog domain VP2307 69a09577fda3e6707d98935ae56c2fd3 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.5E-59 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VP2307 69a09577fda3e6707d98935ae56c2fd3 150 Pfam PF07977 FabA-like domain 17 141 1.1E-39 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 348 1.2E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 Pfam PF07724 AAA domain (Cdc48 subfamily) 624 788 8.9E-44 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 795 870 4.0E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP1392 31d56bce30981b9e6fb78331c2722e5c 890 SMART SM00382 624 783 1.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1392 31d56bce30981b9e6fb78331c2722e5c 890 SMART SM00382 213 358 3.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1392 31d56bce30981b9e6fb78331c2722e5c 890 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 SUPERFAMILY SSF52540 573 873 6.5E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1392 31d56bce30981b9e6fb78331c2722e5c 890 SMART SM01086 795 885 2.5E-10 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP1392 31d56bce30981b9e6fb78331c2722e5c 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 735 749 2.5E-33 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 702 720 2.5E-33 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 628 646 2.5E-33 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 2.5E-33 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 Gene3D G3DSA:1.10.8.60 359 443 1.2E-28 T 22-04-2016 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 Gene3D G3DSA:3.40.50.300 175 357 4.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1392 31d56bce30981b9e6fb78331c2722e5c 890 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 15 876 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 Gene3D G3DSA:1.10.1780.10 17 129 4.5E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 658 676 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 SUPERFAMILY SSF52540 175 505 1.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1392 31d56bce30981b9e6fb78331c2722e5c 890 PANTHER PTHR11638 2 864 0.0 T 22-04-2016 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 Gene3D G3DSA:3.40.50.300 577 805 1.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1392 31d56bce30981b9e6fb78331c2722e5c 890 SUPERFAMILY SSF81923 18 125 1.79E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 Gene3D G3DSA:1.10.8.60 806 883 1.1E-12 T 22-04-2016 VP1392 31d56bce30981b9e6fb78331c2722e5c 890 PANTHER PTHR11638:SF11 2 864 0.0 T 22-04-2016 VP2145 225026ef701f67f01a9ecf8b9bbad8e6 302 SUPERFAMILY SSF52768 3 282 3.17E-82 T 22-04-2016 VP2145 225026ef701f67f01a9ecf8b9bbad8e6 302 Gene3D G3DSA:3.40.800.20 3 283 1.6E-66 T 22-04-2016 IPR023801 Histone deacetylase domain VP2145 225026ef701f67f01a9ecf8b9bbad8e6 302 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 5.5E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily VP2145 225026ef701f67f01a9ecf8b9bbad8e6 302 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 5.5E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily VP2145 225026ef701f67f01a9ecf8b9bbad8e6 302 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 5.5E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily VP2145 225026ef701f67f01a9ecf8b9bbad8e6 302 PANTHER PTHR10625:SF131 1 293 8.2E-123 T 22-04-2016 VP2145 225026ef701f67f01a9ecf8b9bbad8e6 302 Pfam PF00850 Histone deacetylase domain 25 282 1.8E-50 T 22-04-2016 IPR023801 Histone deacetylase domain VP2145 225026ef701f67f01a9ecf8b9bbad8e6 302 PANTHER PTHR10625 1 293 8.2E-123 T 22-04-2016 IPR000286 Histone deacetylase superfamily VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 22-04-2016 IPR000600 ROK family VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 Gene3D G3DSA:1.10.10.10 11 80 5.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 PANTHER PTHR18964 65 402 5.5E-178 T 22-04-2016 VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 PANTHER PTHR18964:SF128 65 402 5.5E-178 T 22-04-2016 VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 Gene3D G3DSA:3.30.420.40 224 375 3.2E-53 T 22-04-2016 VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 Gene3D G3DSA:3.30.420.40 84 223 4.9E-34 T 22-04-2016 VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 SUPERFAMILY SSF53067 86 395 1.15E-54 T 22-04-2016 VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 Pfam PF00480 ROK family 88 390 3.6E-70 T 22-04-2016 IPR000600 ROK family VP2038 def3811348a1ee4a1f89ba7f82af20c6 405 SUPERFAMILY SSF46785 10 76 3.58E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 SUPERFAMILY SSF53901 14 293 1.46E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 PIRSF PIRSF000429 8 435 1.9E-118 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 3.2E-62 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 4.3E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 4.0E-267 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.118 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 PANTHER PTHR18919:SF5 9 435 2.6E-188 T 22-04-2016 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 SUPERFAMILY SSF53901 296 434 1.18E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 7.9E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 303 435 2.3E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 174 219 2.3E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 14 133 1.1E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 220 299 1.1E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2209 3c59fb7317280b84cb0f6ec3439d397f 435 PANTHER PTHR18919 9 435 2.6E-188 T 22-04-2016 VP0823 92a0c42e7f8ab279148498b91793e7f9 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VP0823 92a0c42e7f8ab279148498b91793e7f9 320 Gene3D G3DSA:3.40.50.1400 4 201 2.7E-68 T 22-04-2016 VP0823 92a0c42e7f8ab279148498b91793e7f9 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 320 1.3E-106 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VP0823 92a0c42e7f8ab279148498b91793e7f9 320 Gene3D G3DSA:3.40.50.1400 202 320 2.4E-35 T 22-04-2016 VP0823 92a0c42e7f8ab279148498b91793e7f9 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 38.719 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VP0823 92a0c42e7f8ab279148498b91793e7f9 320 PANTHER PTHR11108 4 320 1.1E-134 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VP0823 92a0c42e7f8ab279148498b91793e7f9 320 SUPERFAMILY SSF53800 4 319 5.63E-107 T 22-04-2016 VP0823 92a0c42e7f8ab279148498b91793e7f9 320 Pfam PF00762 Ferrochelatase 6 319 3.6E-111 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VP2322 114dec446cf3b1547a9db12fc3db0c8d 246 PANTHER PTHR11079 1 243 5.3E-87 T 22-04-2016 VP2322 114dec446cf3b1547a9db12fc3db0c8d 246 Pfam PF00849 RNA pseudouridylate synthase 15 174 1.1E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2322 114dec446cf3b1547a9db12fc3db0c8d 246 PANTHER PTHR11079:SF60 1 243 5.3E-87 T 22-04-2016 VP2322 114dec446cf3b1547a9db12fc3db0c8d 246 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 54 68 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2322 114dec446cf3b1547a9db12fc3db0c8d 246 SUPERFAMILY SSF55120 3 243 5.44E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2691 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 191 263 3.2E-30 T 22-04-2016 VP2691 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 22-04-2016 VP2691 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VP2691 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VP2691 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VP2691 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VP2691 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VP2691 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 9 163 5.3E-46 T 22-04-2016 VP2691 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 22-04-2016 VP2691 c1eeeb1e2108cd5162040211ced02813 347 PANTHER PTHR19375:SF117 9 336 1.3E-188 T 22-04-2016 VP2691 c1eeeb1e2108cd5162040211ced02813 347 PANTHER PTHR19375 9 336 1.3E-188 T 22-04-2016 VP2691 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VP2691 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 267 321 2.6E-35 T 22-04-2016 VP2691 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 164 190 2.6E-35 T 22-04-2016 VP2691 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VP1017 5d0a84bb75906d8dfe565ab510f58b60 233 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 37.071 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VP1017 5d0a84bb75906d8dfe565ab510f58b60 233 PANTHER PTHR21367:SF0 8 232 5.9E-67 T 22-04-2016 VP1017 5d0a84bb75906d8dfe565ab510f58b60 233 PIRSF PIRSF037208 1 233 6.3E-90 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VP1017 5d0a84bb75906d8dfe565ab510f58b60 233 SUPERFAMILY SSF55729 80 232 1.8E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1017 5d0a84bb75906d8dfe565ab510f58b60 233 PANTHER PTHR21367 8 232 5.9E-67 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase VP1017 5d0a84bb75906d8dfe565ab510f58b60 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 3.2E-31 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 VP1017 5d0a84bb75906d8dfe565ab510f58b60 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 3.9E-19 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 Pfam PF00549 CoA-ligase 151 271 3.1E-22 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 SMART SM00881 4 100 4.2E-35 T 22-04-2016 IPR003781 CoA-binding GO:0048037 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 SUPERFAMILY SSF51735 1 122 2.55E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 PANTHER PTHR11117 1 287 2.7E-197 T 22-04-2016 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 Gene3D G3DSA:3.40.50.261 120 287 2.5E-78 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 Pfam PF02629 CoA binding domain 6 99 3.6E-30 T 22-04-2016 IPR003781 CoA-binding GO:0048037 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 SUPERFAMILY SSF52210 123 285 2.09E-55 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 PIRSF PIRSF001553 1 289 3.6E-134 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 Gene3D G3DSA:3.40.50.720 2 119 9.1E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0850 5631ff8a37cbfb8eb018df07e7ad5c10 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 1.1E-145 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PANTHER PTHR11946 239 569 0.0 T 22-04-2016 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PANTHER PTHR11946 612 857 0.0 T 22-04-2016 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 SUPERFAMILY SSF52374 4 226 3.11E-147 T 22-04-2016 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 SUPERFAMILY SSF52374 415 666 3.11E-147 T 22-04-2016 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:3.40.50.620 616 645 1.5E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:3.40.50.620 424 571 1.5E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:3.40.50.620 4 222 1.5E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 2.0E-17 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 1.8E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.5E-9 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 9.8E-27 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 SUPERFAMILY SSF50677 226 414 8.79E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.473 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.8E-79 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:3.90.740.10 223 423 4.1E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PANTHER PTHR11946:SF7 239 569 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PANTHER PTHR11946:SF7 612 857 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 SUPERFAMILY SSF47323 660 856 1.12E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0727 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:1.10.730.10 646 792 3.8E-47 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1406 56fbda161bb7983d0f2e805414a15c2e 343 PANTHER PTHR35564 5 333 1.3E-80 T 22-04-2016 VP1406 56fbda161bb7983d0f2e805414a15c2e 343 PANTHER PTHR35564:SF3 5 333 1.3E-80 T 22-04-2016 VP1406 56fbda161bb7983d0f2e805414a15c2e 343 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 328 6.6E-98 T 22-04-2016 IPR010732 Type VI secretion, TssG-like VP1406 56fbda161bb7983d0f2e805414a15c2e 343 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 21 328 1.2E-83 T 22-04-2016 IPR010732 Type VI secretion, TssG-like VPA1354 1140cb9b451ca2a19a4dd6a75756f7c3 352 PANTHER PTHR10804 96 352 9.9E-101 T 22-04-2016 VPA1354 1140cb9b451ca2a19a4dd6a75756f7c3 352 SUPERFAMILY SSF55920 105 349 4.97E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPA1354 1140cb9b451ca2a19a4dd6a75756f7c3 352 PANTHER PTHR10804:SF87 96 352 9.9E-101 T 22-04-2016 VPA1354 1140cb9b451ca2a19a4dd6a75756f7c3 352 Gene3D G3DSA:3.90.230.10 102 351 1.8E-54 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPA1354 1140cb9b451ca2a19a4dd6a75756f7c3 352 Pfam PF00557 Metallopeptidase family M24 122 323 3.8E-43 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPA1354 1140cb9b451ca2a19a4dd6a75756f7c3 352 Pfam PF16189 Creatinase/Prolidase N-terminal domain 2 108 8.9E-20 T 22-04-2016 VP1385 60d053c0205a82057f73f821eeefd465 324 Gene3D G3DSA:2.70.70.10 162 297 2.1E-43 T 22-04-2016 VP1385 60d053c0205a82057f73f821eeefd465 324 SUPERFAMILY SSF51261 63 296 1.73E-55 T 22-04-2016 IPR011055 Duplicated hybrid motif VP1385 60d053c0205a82057f73f821eeefd465 324 PANTHER PTHR21666:SF207 86 291 1.2E-45 T 22-04-2016 VP1385 60d053c0205a82057f73f821eeefd465 324 Pfam PF01551 Peptidase family M23 198 291 2.1E-30 T 22-04-2016 IPR016047 Peptidase M23 VP1385 60d053c0205a82057f73f821eeefd465 324 PANTHER PTHR21666 86 291 1.2E-45 T 22-04-2016 VP1908 19c5dcee15a07e0de3523b8870c529bb 454 PANTHER PTHR24421 104 447 3.4E-73 T 22-04-2016 VP1908 19c5dcee15a07e0de3523b8870c529bb 454 Pfam PF17200 Single Cache domain 2 45 192 9.2E-41 T 22-04-2016 IPR033480 Single Cache domain 2 VP1908 19c5dcee15a07e0de3523b8870c529bb 454 SMART SM00387 353 447 9.7E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1908 19c5dcee15a07e0de3523b8870c529bb 454 SUPERFAMILY SSF55874 320 443 9.69E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1908 19c5dcee15a07e0de3523b8870c529bb 454 Gene3D G3DSA:3.30.565.10 337 445 1.9E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1908 19c5dcee15a07e0de3523b8870c529bb 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 1.0E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1908 19c5dcee15a07e0de3523b8870c529bb 454 SMART SM01049 42 133 2.0E-31 T 22-04-2016 IPR033480 Single Cache domain 2 VP1908 19c5dcee15a07e0de3523b8870c529bb 454 Pfam PF07730 Histidine kinase 250 315 5.0E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VP1908 19c5dcee15a07e0de3523b8870c529bb 454 PIRSF PIRSF037314 1 454 1.1E-191 T 22-04-2016 IPR017171 Signal transduction histidine kinase, MctS VP1908 19c5dcee15a07e0de3523b8870c529bb 454 PANTHER PTHR24421:SF1 104 447 3.4E-73 T 22-04-2016 VP1908 19c5dcee15a07e0de3523b8870c529bb 454 Gene3D G3DSA:3.30.450.20 35 184 1.2E-48 T 22-04-2016 VP2769 9926671780bf2d4cf6522b5b08e7709a 62 PANTHER PTHR37424:SF1 2 59 2.3E-17 T 22-04-2016 VP2769 9926671780bf2d4cf6522b5b08e7709a 62 PANTHER PTHR37424 2 59 2.3E-17 T 22-04-2016 VP2769 9926671780bf2d4cf6522b5b08e7709a 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.4E-13 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain VP2150 546229992439ec5c48de5fed76eeebac 182 PIRSF PIRSF000232 1 182 2.8E-62 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- VP2150 546229992439ec5c48de5fed76eeebac 182 PANTHER PTHR23026:SF107 1 175 1.3E-85 T 22-04-2016 VP2150 546229992439ec5c48de5fed76eeebac 182 PANTHER PTHR23026 1 175 1.3E-85 T 22-04-2016 VP2150 546229992439ec5c48de5fed76eeebac 182 SUPERFAMILY SSF55469 1 181 1.57E-41 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 VP2150 546229992439ec5c48de5fed76eeebac 182 Gene3D G3DSA:3.40.109.10 1 181 8.4E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 VP2150 546229992439ec5c48de5fed76eeebac 182 Pfam PF00881 Nitroreductase family 8 161 1.4E-22 T 22-04-2016 IPR029479 Nitroreductase VP0810 24e0b504d4ddc6dd179107e39e1b1dda 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 241 2.8E-72 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 VP1121 52ef78576d4b77facb305932d7d6c1c6 430 Gene3D G3DSA:3.50.50.60 200 284 2.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1121 52ef78576d4b77facb305932d7d6c1c6 430 Gene3D G3DSA:3.50.50.60 1 110 2.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1121 52ef78576d4b77facb305932d7d6c1c6 430 PANTHER PTHR10742:SF275 1 411 1.3E-227 T 22-04-2016 VP1121 52ef78576d4b77facb305932d7d6c1c6 430 SUPERFAMILY SSF51905 382 413 2.59E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1121 52ef78576d4b77facb305932d7d6c1c6 430 SUPERFAMILY SSF51905 1 299 2.59E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1121 52ef78576d4b77facb305932d7d6c1c6 430 PANTHER PTHR10742 1 411 1.3E-227 T 22-04-2016 VP1121 52ef78576d4b77facb305932d7d6c1c6 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 303 5.7E-18 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 VP2949 2fd516ac03952bc9f4d762f4ebb47ea3 183 PANTHER PTHR38683 7 183 1.0E-51 T 22-04-2016 VP2949 2fd516ac03952bc9f4d762f4ebb47ea3 183 SUPERFAMILY SSF64288 11 178 6.12E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VP2949 2fd516ac03952bc9f4d762f4ebb47ea3 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.643 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VP2949 2fd516ac03952bc9f4d762f4ebb47ea3 183 Pfam PF04345 Chorismate lyase 18 183 2.5E-57 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VP2949 2fd516ac03952bc9f4d762f4ebb47ea3 183 Gene3D G3DSA:3.40.1410.10 16 178 7.7E-51 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VP2033 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 PANTHER PTHR24322:SF337 17 149 1.4E-71 T 22-04-2016 VP2033 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 5.1E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.1E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.1E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.007 T 22-04-2016 VP2033 46d0f77535e371ff529efccf5aef8627 248 SUPERFAMILY SSF51735 9 242 2.1E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2033 46d0f77535e371ff529efccf5aef8627 248 PANTHER PTHR24322 17 149 1.4E-71 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 Gene3D G3DSA:3.40.50.720 8 243 2.4E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2033 46d0f77535e371ff529efccf5aef8627 248 PANTHER PTHR24322 165 197 1.4E-71 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 PANTHER PTHR24322:SF337 165 197 1.4E-71 T 22-04-2016 VP2033 46d0f77535e371ff529efccf5aef8627 248 Pfam PF00106 short chain dehydrogenase 13 208 1.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2033 46d0f77535e371ff529efccf5aef8627 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VP2900 8730676af83bed0f5eea6fbd2b624e60 500 Pfam PF07693 KAP family P-loop domain 37 379 5.7E-73 T 22-04-2016 IPR011646 KAP family P-loop domain VP2900 8730676af83bed0f5eea6fbd2b624e60 500 SUPERFAMILY SSF52540 37 105 7.8E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2900 8730676af83bed0f5eea6fbd2b624e60 500 SUPERFAMILY SSF52540 183 264 7.8E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2900 8730676af83bed0f5eea6fbd2b624e60 500 Gene3D G3DSA:3.40.50.300 66 131 1.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2900 8730676af83bed0f5eea6fbd2b624e60 500 Gene3D G3DSA:3.40.50.300 185 256 1.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 Pfam PF08544 GHMP kinases C terminal 280 361 5.3E-11 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 1.3E-147 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PIRSF PIRSF000530 1 385 1.4E-129 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.211 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 1.1E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 Gene3D G3DSA:3.30.230.10 4 208 2.5E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 SUPERFAMILY SSF55060 205 382 3.2E-53 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.7E-22 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 Gene3D G3DSA:3.30.70.890 209 381 3.0E-63 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PANTHER PTHR10457:SF6 3 386 2.4E-148 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 SUPERFAMILY SSF54211 2 204 6.45E-65 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PANTHER PTHR10457 3 386 2.4E-148 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2398 c1bfd9e9c2a6227419817dcac494dc01 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP1798 a29bc6fa4c6e8216a487da11f92ddc54 119 Gene3D G3DSA:3.10.180.10 7 116 2.2E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP1798 a29bc6fa4c6e8216a487da11f92ddc54 119 SUPERFAMILY SSF54593 6 117 3.44E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP1798 a29bc6fa4c6e8216a487da11f92ddc54 119 PANTHER PTHR33993:SF1 1 119 6.2E-65 T 22-04-2016 VP1798 a29bc6fa4c6e8216a487da11f92ddc54 119 PANTHER PTHR33993 1 119 6.2E-65 T 22-04-2016 VP1798 a29bc6fa4c6e8216a487da11f92ddc54 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 1.8E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VP0374 efa9ee88176ea812d7ef940dfec988c5 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 5.0E-17 T 22-04-2016 IPR007497 Protein of unknown function DUF541 VP0374 efa9ee88176ea812d7ef940dfec988c5 239 PIRSF PIRSF029033 1 239 1.1E-109 T 22-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein VP1361 b04e48acd70da212ac454c9a556a9c05 357 Pfam PF13466 STAS domain 8 83 3.5E-8 T 22-04-2016 IPR002645 STAS domain VP1361 b04e48acd70da212ac454c9a556a9c05 357 Pfam PF02405 Permease MlaE 150 355 4.2E-66 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VP1361 b04e48acd70da212ac454c9a556a9c05 357 PANTHER PTHR30188 26 355 3.5E-70 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VP1361 b04e48acd70da212ac454c9a556a9c05 357 PANTHER PTHR30188:SF3 26 355 3.5E-70 T 22-04-2016 VP1361 b04e48acd70da212ac454c9a556a9c05 357 SUPERFAMILY SSF52091 5 93 8.83E-11 T 22-04-2016 IPR002645 STAS domain VP1361 b04e48acd70da212ac454c9a556a9c05 357 Gene3D G3DSA:3.30.750.24 7 83 2.5E-8 T 22-04-2016 IPR002645 STAS domain VP1361 b04e48acd70da212ac454c9a556a9c05 357 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 130 356 2.8E-64 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VP0489 0fe142debeab5dffe86b7f604d25bc36 238 SMART SM00862 156 232 1.9E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0489 0fe142debeab5dffe86b7f604d25bc36 238 SMART SM00448 4 114 2.7E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0489 0fe142debeab5dffe86b7f604d25bc36 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 4.4E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0489 0fe142debeab5dffe86b7f604d25bc36 238 Pfam PF00072 Response regulator receiver domain 6 113 3.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0489 0fe142debeab5dffe86b7f604d25bc36 238 PANTHER PTHR26402:SF586 4 238 1.6E-149 T 22-04-2016 VP0489 0fe142debeab5dffe86b7f604d25bc36 238 SUPERFAMILY SSF46894 137 233 2.58E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP0489 0fe142debeab5dffe86b7f604d25bc36 238 PANTHER PTHR26402 4 238 1.6E-149 T 22-04-2016 VP0489 0fe142debeab5dffe86b7f604d25bc36 238 SUPERFAMILY SSF52172 2 130 2.99E-36 T 22-04-2016 IPR011006 CheY-like superfamily VP0489 0fe142debeab5dffe86b7f604d25bc36 238 Gene3D G3DSA:3.40.50.2300 2 130 3.1E-36 T 22-04-2016 VP0489 0fe142debeab5dffe86b7f604d25bc36 238 Gene3D G3DSA:1.10.10.10 134 233 1.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2916 ef4b959889a1885da279edc9582eec5e 355 PANTHER PTHR21091 1 351 5.8E-163 T 22-04-2016 VP2916 ef4b959889a1885da279edc9582eec5e 355 SUPERFAMILY SSF51726 1 354 2.79E-123 T 22-04-2016 VP2916 ef4b959889a1885da279edc9582eec5e 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.771 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP2916 ef4b959889a1885da279edc9582eec5e 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.4E-139 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP2916 ef4b959889a1885da279edc9582eec5e 355 Gene3D G3DSA:3.20.20.210 2 353 2.9E-155 T 22-04-2016 VP2916 ef4b959889a1885da279edc9582eec5e 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.2E-141 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP2916 ef4b959889a1885da279edc9582eec5e 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP2916 ef4b959889a1885da279edc9582eec5e 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VP2916 ef4b959889a1885da279edc9582eec5e 355 PANTHER PTHR21091:SF2 1 351 5.8E-163 T 22-04-2016 VP0772 55024be1b2eb19e3fb9702f6a709db3d 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.0E-41 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VP0772 55024be1b2eb19e3fb9702f6a709db3d 248 PANTHER PTHR36307 27 246 9.1E-42 T 22-04-2016 VP0772 55024be1b2eb19e3fb9702f6a709db3d 248 SMART SM00858 126 188 1.2E-9 T 22-04-2016 IPR013974 SAF domain VP0772 55024be1b2eb19e3fb9702f6a709db3d 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 52 246 4.1E-53 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 5.3E-28 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 4.2E-62 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 Gene3D G3DSA:3.40.50.150 436 705 9.8E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 Pfam PF02926 THUMP domain 30 153 3.0E-13 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 PIRSF PIRSF037618 1 707 3.3E-296 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 SUPERFAMILY SSF53335 399 707 2.94E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 PANTHER PTHR18895 405 682 6.0E-124 T 22-04-2016 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 SMART SM00981 56 154 1.7E-19 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.398 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 PANTHER PTHR18895:SF62 405 682 6.0E-124 T 22-04-2016 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 Gene3D G3DSA:3.40.50.150 255 333 1.6E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 Gene3D G3DSA:3.40.50.150 153 214 1.6E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 SUPERFAMILY SSF53335 140 217 8.32E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1597 b39bcb9060f6552f66c7f8859be0e2d6 707 SUPERFAMILY SSF53335 258 371 8.32E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0978 369569e2227ecda70230c7f47cac2adb 235 SMART SM00382 33 221 2.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0978 369569e2227ecda70230c7f47cac2adb 235 SUPERFAMILY SSF52540 4 225 1.82E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0978 369569e2227ecda70230c7f47cac2adb 235 PANTHER PTHR24220:SF111 6 222 8.0E-121 T 22-04-2016 VP0978 369569e2227ecda70230c7f47cac2adb 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0978 369569e2227ecda70230c7f47cac2adb 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 5.6E-112 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 VP0978 369569e2227ecda70230c7f47cac2adb 235 Gene3D G3DSA:3.40.50.300 3 227 4.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0978 369569e2227ecda70230c7f47cac2adb 235 Pfam PF00005 ABC transporter 24 172 2.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0978 369569e2227ecda70230c7f47cac2adb 235 PANTHER PTHR24220 6 222 8.0E-121 T 22-04-2016 VP0540 42bbb553a7f72323ecbe1513192beb2e 494 PANTHER PTHR30252:SF0 1 470 2.7E-170 T 22-04-2016 VP0540 42bbb553a7f72323ecbe1513192beb2e 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.9E-21 T 22-04-2016 IPR025299 CstA, C-terminal domain VP0540 42bbb553a7f72323ecbe1513192beb2e 494 PANTHER PTHR30252 1 470 2.7E-170 T 22-04-2016 VP0540 42bbb553a7f72323ecbe1513192beb2e 494 Pfam PF02554 Carbon starvation protein CstA 4 144 5.3E-33 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VP1355 dd578b1ed8f5d67934668c29ff343607 419 Pfam PF13265 Protein of unknown function (DUF4056) 59 326 8.6E-116 T 22-04-2016 IPR025130 Protein of unknown function DUF4056 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.269 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Gene3D G3DSA:3.40.50.720 2 160 1.1E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.9E-73 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 5.7E-30 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 SUPERFAMILY SSF48179 163 270 3.4E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 9.3E-26 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 PIRSF PIRSF000193 3 270 3.4E-75 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Gene3D G3DSA:1.10.3730.10 162 268 5.5E-30 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 PANTHER PTHR11645 1 270 4.9E-109 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 PANTHER PTHR11645:SF0 1 270 4.9E-109 T 22-04-2016 VP2617 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 SUPERFAMILY SSF51735 4 160 7.9E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0959 f2a7212c8f5946a3db0e102759479485 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 736 2.2E-85 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VP0959 f2a7212c8f5946a3db0e102759479485 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 522 6.9E-97 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 SUPERFAMILY SSF81665 706 745 5.36E-20 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 SUPERFAMILY SSF81665 363 457 5.36E-20 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 SUPERFAMILY SSF81665 215 266 5.36E-20 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 1.7E-38 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 Pfam PF00403 Heavy-metal-associated domain 77 124 1.6E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 3.2E-27 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 3.2E-27 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 3.2E-27 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 3.2E-27 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 3.2E-27 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 3.2E-27 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 SUPERFAMILY SSF56784 462 481 1.04E-50 T 22-04-2016 IPR023214 HAD-like domain VP0959 f2a7212c8f5946a3db0e102759479485 768 SUPERFAMILY SSF56784 556 757 1.04E-50 T 22-04-2016 IPR023214 HAD-like domain VP0959 f2a7212c8f5946a3db0e102759479485 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VP0959 f2a7212c8f5946a3db0e102759479485 768 PANTHER PTHR24093:SF126 72 760 3.4E-211 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 Gene3D G3DSA:3.40.1110.10 477 586 9.7E-18 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VP0959 f2a7212c8f5946a3db0e102759479485 768 PANTHER PTHR24093 72 760 3.4E-211 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 Gene3D G3DSA:2.70.150.10 215 363 1.9E-26 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VP0959 f2a7212c8f5946a3db0e102759479485 768 Gene3D G3DSA:3.40.50.1000 436 476 6.5E-42 T 22-04-2016 IPR023214 HAD-like domain VP0959 f2a7212c8f5946a3db0e102759479485 768 Gene3D G3DSA:3.40.50.1000 587 723 6.5E-42 T 22-04-2016 IPR023214 HAD-like domain VP0959 f2a7212c8f5946a3db0e102759479485 768 Gene3D G3DSA:3.30.70.100 74 138 3.1E-13 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 SUPERFAMILY SSF55008 71 139 2.88E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP0959 f2a7212c8f5946a3db0e102759479485 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 2.9E-175 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VP0959 f2a7212c8f5946a3db0e102759479485 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site VP0959 f2a7212c8f5946a3db0e102759479485 768 SUPERFAMILY SSF81653 265 362 4.97E-22 T 22-04-2016 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 6.7E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 6.7E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VP0959 f2a7212c8f5946a3db0e102759479485 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 6.7E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VP0959 f2a7212c8f5946a3db0e102759479485 768 Pfam PF00122 E1-E2 ATPase 233 454 2.7E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VP0887 091fcce6da8f6cb7fdda8b86b4275885 206 Gene3D G3DSA:2.50.20.10 27 193 1.3E-14 T 22-04-2016 VP0887 091fcce6da8f6cb7fdda8b86b4275885 206 SUPERFAMILY SSF89392 27 192 5.89E-20 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VP0887 091fcce6da8f6cb7fdda8b86b4275885 206 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 192 5.1E-11 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 Gene3D G3DSA:3.40.190.10 111 182 3.9E-12 T 22-04-2016 VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.3E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 SUPERFAMILY SSF53850 89 286 2.71E-31 T 22-04-2016 VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 Gene3D G3DSA:3.40.190.10 183 252 4.2E-4 T 22-04-2016 VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 PANTHER PTHR30537 1 285 2.3E-65 T 22-04-2016 VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 Pfam PF03466 LysR substrate binding domain 89 285 3.7E-28 T 22-04-2016 IPR005119 LysR, substrate-binding VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 SUPERFAMILY SSF46785 4 89 1.6E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 Gene3D G3DSA:1.10.10.10 4 89 7.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1988 ea6f7e8e6278d29f03e8afb9837d027d 286 PANTHER PTHR30537:SF5 1 285 2.3E-65 T 22-04-2016 VP1348 4facf86955b5947f04141ea2bf100ab2 368 SUPERFAMILY SSF53187 7 177 1.74E-57 T 22-04-2016 VP1348 4facf86955b5947f04141ea2bf100ab2 368 SUPERFAMILY SSF53187 287 367 1.74E-57 T 22-04-2016 VP1348 4facf86955b5947f04141ea2bf100ab2 368 Gene3D G3DSA:3.30.70.360 178 281 5.7E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1348 4facf86955b5947f04141ea2bf100ab2 368 Gene3D G3DSA:3.40.630.10 3 177 2.3E-66 T 22-04-2016 VP1348 4facf86955b5947f04141ea2bf100ab2 368 Gene3D G3DSA:3.40.630.10 287 366 2.3E-66 T 22-04-2016 VP1348 4facf86955b5947f04141ea2bf100ab2 368 PANTHER PTHR11014 1 362 1.9E-130 T 22-04-2016 VP1348 4facf86955b5947f04141ea2bf100ab2 368 SUPERFAMILY SSF55031 177 289 4.58E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1348 4facf86955b5947f04141ea2bf100ab2 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 3.3E-17 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VP1348 4facf86955b5947f04141ea2bf100ab2 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 3.2E-157 T 22-04-2016 IPR010162 Peptidase M20B, peptidase T VP1348 4facf86955b5947f04141ea2bf100ab2 368 Pfam PF07687 Peptidase dimerisation domain 182 273 5.1E-15 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1348 4facf86955b5947f04141ea2bf100ab2 368 PANTHER PTHR11014:SF61 1 362 1.9E-130 T 22-04-2016 VP2173 ed5cf05f12fb6ee278856a602a8d2437 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 425 34.741 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 VP2173 ed5cf05f12fb6ee278856a602a8d2437 425 PANTHER PTHR30501:SF2 1 423 1.2E-120 T 22-04-2016 VP2173 ed5cf05f12fb6ee278856a602a8d2437 425 PANTHER PTHR30501 1 423 1.2E-120 T 22-04-2016 VP2173 ed5cf05f12fb6ee278856a602a8d2437 425 PIRSF PIRSF006054 1 425 2.9E-191 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 VP2173 ed5cf05f12fb6ee278856a602a8d2437 425 Pfam PF03313 Serine dehydratase alpha chain 133 420 3.8E-50 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit VP1171 34ef7989a5223a930d556f4a67acbdbc 539 PIRSF PIRSF002741 4 538 3.6E-92 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VP1171 34ef7989a5223a930d556f4a67acbdbc 539 Gene3D G3DSA:3.90.76.10 42 222 4.4E-40 T 22-04-2016 VP1171 34ef7989a5223a930d556f4a67acbdbc 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 1.2E-85 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VP1171 34ef7989a5223a930d556f4a67acbdbc 539 PANTHER PTHR30290 1 538 2.1E-245 T 22-04-2016 VP1171 34ef7989a5223a930d556f4a67acbdbc 539 PANTHER PTHR30290:SF28 1 538 2.1E-245 T 22-04-2016 VP1171 34ef7989a5223a930d556f4a67acbdbc 539 SUPERFAMILY SSF53850 35 535 7.6E-132 T 22-04-2016 VP1171 34ef7989a5223a930d556f4a67acbdbc 539 Gene3D G3DSA:3.10.105.10 293 508 7.3E-58 T 22-04-2016 VP1959 57fd4094c342ba8318be2928d643fbb4 481 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 74 92 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VP1959 57fd4094c342ba8318be2928d643fbb4 481 Pfam PF00218 Indole-3-glycerol phosphate synthase 29 278 5.1E-98 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VP1959 57fd4094c342ba8318be2928d643fbb4 481 Gene3D G3DSA:3.20.20.70 286 474 7.9E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1959 57fd4094c342ba8318be2928d643fbb4 481 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 284 476 1.8E-60 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VP1959 57fd4094c342ba8318be2928d643fbb4 481 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 282 481 30.137 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VP1959 57fd4094c342ba8318be2928d643fbb4 481 PANTHER PTHR22854 3 309 8.4E-138 T 22-04-2016 VP1959 57fd4094c342ba8318be2928d643fbb4 481 PANTHER PTHR22854:SF2 3 309 8.4E-138 T 22-04-2016 VP1959 57fd4094c342ba8318be2928d643fbb4 481 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 27 281 35.65 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VP1959 57fd4094c342ba8318be2928d643fbb4 481 SUPERFAMILY SSF51366 25 278 3.41E-82 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VP1959 57fd4094c342ba8318be2928d643fbb4 481 SUPERFAMILY SSF51366 284 479 5.96E-54 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VP1959 57fd4094c342ba8318be2928d643fbb4 481 Gene3D G3DSA:3.20.20.70 25 285 1.9E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 Pfam PF12833 Helix-turn-helix domain 1047 1121 6.6E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 SUPERFAMILY SSF50998 58 378 6.91E-5 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VP0854 3513512dec3a1e4809fbe6cebba79926 1130 Gene3D G3DSA:1.10.10.60 1017 1076 2.2E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1106 1122 1.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1091 1106 1.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 PANTHER PTHR11019:SF112 1023 1130 4.2E-23 T 22-04-2016 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 Gene3D G3DSA:1.10.10.60 1077 1121 3.1E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1077 1118 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 SMART SM00342 1040 1122 1.6E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 SUPERFAMILY SSF63829 253 451 1.31E-12 T 22-04-2016 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 PANTHER PTHR11019 1023 1130 4.2E-23 T 22-04-2016 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 SUPERFAMILY SSF46689 1076 1122 4.48E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0854 3513512dec3a1e4809fbe6cebba79926 1130 Gene3D G3DSA:2.120.10.30 212 368 3.5E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VP0875 69bc732cb94a84ad80d16bb7c045ebbf 94 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 1.0E-36 T 22-04-2016 IPR027354 YcgL domain VP0875 69bc732cb94a84ad80d16bb7c045ebbf 94 PANTHER PTHR38109 2 94 8.4E-35 T 22-04-2016 VP0875 69bc732cb94a84ad80d16bb7c045ebbf 94 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.303 T 22-04-2016 IPR027354 YcgL domain VP0875 69bc732cb94a84ad80d16bb7c045ebbf 94 SUPERFAMILY SSF160191 1 92 1.22E-37 T 22-04-2016 VP0875 69bc732cb94a84ad80d16bb7c045ebbf 94 Pfam PF05166 YcgL domain 3 74 5.2E-32 T 22-04-2016 IPR027354 YcgL domain VP2884 bd247d5809feda34f0e4d15d66232d6e 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 10 330 49.924 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 PIRSF PIRSF006621 9 330 1.6E-101 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 Gene3D G3DSA:3.20.20.70 16 253 8.4E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 Gene3D G3DSA:1.10.1200.80 262 329 5.3E-19 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 SUPERFAMILY SSF51395 19 328 6.23E-90 T 22-04-2016 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 329 1.9E-132 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 PANTHER PTHR11082:SF25 10 329 1.0E-147 T 22-04-2016 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 Pfam PF01207 Dihydrouridine synthase (Dus) 22 315 1.3E-108 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2884 bd247d5809feda34f0e4d15d66232d6e 331 PANTHER PTHR11082 10 329 1.0E-147 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP0340 92629e8a7489c419c3b70e3485810bbb 284 SUPERFAMILY SSF46565 215 278 7.63E-17 T 22-04-2016 IPR001623 DnaJ domain VP0340 92629e8a7489c419c3b70e3485810bbb 284 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 284 40.349 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 VP0340 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 220 238 1.2E-8 T 22-04-2016 IPR001623 DnaJ domain VP0340 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 262 282 1.2E-8 T 22-04-2016 IPR001623 DnaJ domain VP0340 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 238 253 1.2E-8 T 22-04-2016 IPR001623 DnaJ domain VP0340 92629e8a7489c419c3b70e3485810bbb 284 Gene3D G3DSA:1.10.3680.10 20 222 2.3E-39 T 22-04-2016 IPR029024 TerB-like VP0340 92629e8a7489c419c3b70e3485810bbb 284 Gene3D G3DSA:1.10.287.110 223 278 4.4E-15 T 22-04-2016 IPR001623 DnaJ domain VP0340 92629e8a7489c419c3b70e3485810bbb 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 8.8E-18 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VP0340 92629e8a7489c419c3b70e3485810bbb 284 SMART SM00271 217 282 1.0E-17 T 22-04-2016 IPR001623 DnaJ domain VP0340 92629e8a7489c419c3b70e3485810bbb 284 Pfam PF00226 DnaJ domain 218 278 6.8E-12 T 22-04-2016 IPR001623 DnaJ domain VP0340 92629e8a7489c419c3b70e3485810bbb 284 SUPERFAMILY SSF158682 53 185 6.28E-32 T 22-04-2016 IPR029024 TerB-like VP0340 92629e8a7489c419c3b70e3485810bbb 284 SUPERFAMILY SSF158682 216 230 6.28E-32 T 22-04-2016 IPR029024 TerB-like VP0340 92629e8a7489c419c3b70e3485810bbb 284 SUPERFAMILY SSF158682 5 21 6.28E-32 T 22-04-2016 IPR029024 TerB-like VP0325 ef99383015c803bec86cced4a5668eac 311 PIRSF PIRSF000102 1 307 9.2E-63 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VP0325 ef99383015c803bec86cced4a5668eac 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 1.9E-50 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VP0325 ef99383015c803bec86cced4a5668eac 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.8E-47 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VP0325 ef99383015c803bec86cced4a5668eac 311 PANTHER PTHR11540:SF22 1 311 2.8E-220 T 22-04-2016 VP0325 ef99383015c803bec86cced4a5668eac 311 PANTHER PTHR11540 1 311 2.8E-220 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VP0325 ef99383015c803bec86cced4a5668eac 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.449 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VP0325 ef99383015c803bec86cced4a5668eac 311 Gene3D G3DSA:3.90.110.10 147 311 4.3E-65 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VP0325 ef99383015c803bec86cced4a5668eac 311 SUPERFAMILY SSF51735 1 145 5.57E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0325 ef99383015c803bec86cced4a5668eac 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 9.7E-130 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VP0325 ef99383015c803bec86cced4a5668eac 311 Gene3D G3DSA:3.40.50.720 1 145 3.4E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0325 ef99383015c803bec86cced4a5668eac 311 SUPERFAMILY SSF56327 147 309 5.71E-44 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VP0325 ef99383015c803bec86cced4a5668eac 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.2E-106 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 Gene3D G3DSA:3.40.50.720 285 388 4.1E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 SUPERFAMILY SSF48179 191 287 4.87E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 SMART SM00984 300 387 4.4E-14 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 SUPERFAMILY SSF52413 283 387 2.22E-28 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 Gene3D G3DSA:1.10.1040.10 198 284 1.1E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 2.2E-9 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 PIRSF PIRSF000124 1 388 4.8E-138 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 PANTHER PTHR11374:SF17 1 372 5.5E-236 T 22-04-2016 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 SUPERFAMILY SSF51735 1 194 1.14E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 PANTHER PTHR11374 1 372 5.5E-236 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 PIRSF PIRSF500134 1 343 1.4E-121 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 Gene3D G3DSA:3.40.50.720 1 197 1.5E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 2.4E-33 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 VP0236 1196f83dd50b1bd4fe519753c213e9ed 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.9E-27 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 SUPERFAMILY SSF53383 2 423 5.98E-135 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.427 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 Pfam PF00202 Aminotransferase class-III 33 397 2.3E-76 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 Gene3D G3DSA:3.40.640.10 71 316 8.1E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 Gene3D G3DSA:3.90.1150.10 319 424 2.2E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 Gene3D G3DSA:3.90.1150.10 2 69 2.2E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 PANTHER PTHR11986 1 431 5.3E-237 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.2E-194 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VP2475 13f26ba8d861b9a3aaf4d6a2d941dc90 431 PANTHER PTHR11986:SF5 1 431 5.3E-237 T 22-04-2016 VP1877 347a9fd4cb73fef98826145b5837d405 179 SUPERFAMILY SSF111126 1 176 5.75E-51 T 22-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain VP1877 347a9fd4cb73fef98826145b5837d405 179 Gene3D G3DSA:3.90.1520.10 1 177 4.6E-57 T 22-04-2016 VP1877 347a9fd4cb73fef98826145b5837d405 179 Pfam PF07700 Haem-NO-binding 2 161 1.3E-38 T 22-04-2016 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.1E-9 T 22-04-2016 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.1E-9 T 22-04-2016 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 PANTHER PTHR11632 1 584 0.0 T 22-04-2016 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 Gene3D G3DSA:3.90.700.10 234 351 4.7E-35 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.6E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 Gene3D G3DSA:3.50.50.60 353 417 7.2E-108 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 Gene3D G3DSA:3.50.50.60 4 233 7.2E-108 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 Gene3D G3DSA:4.10.80.40 543 577 5.5E-17 T 22-04-2016 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 PANTHER PTHR11632:SF50 1 584 0.0 T 22-04-2016 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 Pfam PF00890 FAD binding domain 7 397 4.1E-113 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 Gene3D G3DSA:1.20.58.100 426 537 3.7E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 22-04-2016 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 22-04-2016 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 PIRSF PIRSF000171 1 574 9.0E-46 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 2.6E-236 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 SUPERFAMILY SSF56425 227 358 3.59E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 22-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 SUPERFAMILY SSF51905 3 250 2.44E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 SUPERFAMILY SSF51905 361 441 2.44E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 SUPERFAMILY SSF46977 444 581 8.37E-44 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP2840 45e5b14ca3df1cd58f47c98141e70aad 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VP2744 3a38c38fd4bd2f0f4d121e57bb1bdd6c 366 PIRSF PIRSF001455 22 365 1.0E-106 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VP2744 3a38c38fd4bd2f0f4d121e57bb1bdd6c 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 4.1E-120 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VP2744 3a38c38fd4bd2f0f4d121e57bb1bdd6c 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 362 43.472 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VP2744 3a38c38fd4bd2f0f4d121e57bb1bdd6c 366 PANTHER PTHR21090 1 366 5.1E-205 T 22-04-2016 VP2744 3a38c38fd4bd2f0f4d121e57bb1bdd6c 366 Gene3D G3DSA:1.20.1090.10 177 360 4.6E-68 T 22-04-2016 VP2744 3a38c38fd4bd2f0f4d121e57bb1bdd6c 366 Gene3D G3DSA:3.40.50.1970 2 176 5.2E-66 T 22-04-2016 VP2744 3a38c38fd4bd2f0f4d121e57bb1bdd6c 366 Pfam PF01761 3-dehydroquinate synthase 72 329 1.2E-110 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VP2744 3a38c38fd4bd2f0f4d121e57bb1bdd6c 366 SUPERFAMILY SSF56796 4 360 1.57E-117 T 22-04-2016 VP1098 6ba214199fa6cfea4afc27ec911853f1 442 Gene3D G3DSA:3.60.10.10 178 346 6.4E-12 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP1098 6ba214199fa6cfea4afc27ec911853f1 442 PANTHER PTHR16320 172 344 4.4E-33 T 22-04-2016 VP1098 6ba214199fa6cfea4afc27ec911853f1 442 SUPERFAMILY SSF56219 175 440 1.44E-64 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP1098 6ba214199fa6cfea4afc27ec911853f1 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 433 8.2E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP1906 ea9071d9f6a7a6bbc0a7779448963a6e 158 Gene3D G3DSA:1.10.10.10 3 139 2.9E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1906 ea9071d9f6a7a6bbc0a7779448963a6e 158 PANTHER PTHR33164 1 148 1.1E-22 T 22-04-2016 VP1906 ea9071d9f6a7a6bbc0a7779448963a6e 158 SMART SM00347 24 124 1.8E-19 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1906 ea9071d9f6a7a6bbc0a7779448963a6e 158 SUPERFAMILY SSF46785 4 141 1.29E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1906 ea9071d9f6a7a6bbc0a7779448963a6e 158 Pfam PF01047 MarR family 31 89 8.7E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP2090 b35e8e61415bef43f4a31cf0e4c5589f 306 SUPERFAMILY SSF161098 88 291 1.53E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2090 b35e8e61415bef43f4a31cf0e4c5589f 306 Gene3D G3DSA:1.10.3720.10 88 301 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2090 b35e8e61415bef43f4a31cf0e4c5589f 306 PANTHER PTHR30465:SF74 1 306 5.9E-151 T 22-04-2016 VP2090 b35e8e61415bef43f4a31cf0e4c5589f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.8E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2090 b35e8e61415bef43f4a31cf0e4c5589f 306 PANTHER PTHR30465 1 306 5.9E-151 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 4.5E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1438 f761c8eb81a617bde2b0812f670e0527 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 4.5E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1438 f761c8eb81a617bde2b0812f670e0527 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 4.5E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1438 f761c8eb81a617bde2b0812f670e0527 935 PRINTS PR00301 70kDa heat shock protein signature 398 418 4.5E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1438 f761c8eb81a617bde2b0812f670e0527 935 SUPERFAMILY SSF53067 6 209 5.55E-30 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 PANTHER PTHR19375:SF226 44 69 4.6E-90 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 PANTHER PTHR19375:SF226 85 278 4.6E-90 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 PANTHER PTHR19375:SF226 6 23 4.6E-90 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 SUPERFAMILY SSF53067 223 369 1.81E-21 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 SUPERFAMILY SSF53067 403 456 1.81E-21 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 PANTHER PTHR19375 44 69 4.6E-90 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 PANTHER PTHR19375 85 278 4.6E-90 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 PANTHER PTHR19375 6 23 4.6E-90 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 Pfam PF12531 DNA-K related protein 685 932 4.9E-101 T 22-04-2016 IPR021030 Protein of unknown function DUF3731 VP1438 f761c8eb81a617bde2b0812f670e0527 935 Gene3D G3DSA:3.30.420.40 6 227 4.4E-35 T 22-04-2016 VP1438 f761c8eb81a617bde2b0812f670e0527 935 Pfam PF00012 Hsp70 protein 83 315 2.3E-16 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1438 f761c8eb81a617bde2b0812f670e0527 935 Gene3D G3DSA:3.30.420.40 228 335 2.2E-16 T 22-04-2016 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 PANTHER PTHR10978:SF4 6 130 5.7E-72 T 22-04-2016 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 Gene3D G3DSA:1.20.1300.10 6 130 5.2E-40 T 22-04-2016 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 1.4E-38 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 PIRSF PIRSF000178 2 130 1.9E-31 T 22-04-2016 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 SUPERFAMILY SSF81343 8 130 6.32E-33 T 22-04-2016 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 9.4E-28 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 PANTHER PTHR10978 6 130 5.7E-72 T 22-04-2016 VP0843 46d60cbc1e48831f4ba4f5a7e2cc89d4 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VP0696 79796135a009e20792699ad134ef5489 250 SMART SM00477 41 232 2.9E-64 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 VP0696 79796135a009e20792699ad134ef5489 250 Gene3D G3DSA:3.40.570.10 20 248 3.2E-72 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 VP0696 79796135a009e20792699ad134ef5489 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 100 108 - T 22-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 VP0696 79796135a009e20792699ad134ef5489 250 SUPERFAMILY SSF54060 33 239 1.29E-70 T 22-04-2016 VP0696 79796135a009e20792699ad134ef5489 250 PANTHER PTHR13966 23 240 2.6E-56 T 22-04-2016 VP0696 79796135a009e20792699ad134ef5489 250 SMART SM00892 40 232 7.8E-64 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VP0696 79796135a009e20792699ad134ef5489 250 Pfam PF01223 DNA/RNA non-specific endonuclease 24 231 1.1E-57 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VP0316 a547c13c52f2d8f17d0ce6df56094ab7 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 6.0E-144 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 VP0316 a547c13c52f2d8f17d0ce6df56094ab7 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 5.6E-146 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 VP0316 a547c13c52f2d8f17d0ce6df56094ab7 330 Gene3D G3DSA:3.40.190.10 22 131 1.4E-38 T 22-04-2016 VP0316 a547c13c52f2d8f17d0ce6df56094ab7 330 Gene3D G3DSA:3.40.190.10 244 288 1.4E-38 T 22-04-2016 VP0316 a547c13c52f2d8f17d0ce6df56094ab7 330 PANTHER PTHR30006:SF3 3 330 5.9E-128 T 22-04-2016 VP0316 a547c13c52f2d8f17d0ce6df56094ab7 330 SUPERFAMILY SSF53850 24 325 4.91E-69 T 22-04-2016 VP0316 a547c13c52f2d8f17d0ce6df56094ab7 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 1.8E-22 T 22-04-2016 VP0316 a547c13c52f2d8f17d0ce6df56094ab7 330 PANTHER PTHR30006 3 330 5.9E-128 T 22-04-2016 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.2E-40 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 20 82 1.1E-32 T 22-04-2016 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 PANTHER PTHR15893 1 85 2.9E-53 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0329 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 Pfam PF16330 MukB hinge domain 647 811 3.1E-73 T 22-04-2016 IPR032520 MukB, hinge domain VP1037 250cf137ebcb5eaa260198c26836d34a 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.1E-14 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 Pfam PF04310 MukB N-terminal 2 227 8.1E-122 T 22-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.922 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 Gene3D G3DSA:3.40.1140.10 1 225 1.9E-44 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937 99 529 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937 1427 1460 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937 898 939 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937 978 1117 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937 605 815 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937 554 580 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937 1213 1249 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937 848 879 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937:SF201 99 529 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937:SF201 1427 1460 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937:SF201 898 939 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937:SF201 978 1117 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937:SF201 605 815 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937:SF201 554 580 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937:SF201 1213 1249 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PANTHER PTHR18937:SF201 848 879 0.0 T 22-04-2016 VP1037 250cf137ebcb5eaa260198c26836d34a 1487 SUPERFAMILY SSF52540 26 224 1.02E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1037 250cf137ebcb5eaa260198c26836d34a 1487 PIRSF PIRSF005246 1 1487 0.0 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 PANTHER PTHR22648:SF0 1 448 3.9E-186 T 22-04-2016 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.5E-125 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.9E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.8E-22 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 SMART SM00316 133 198 9.4E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:1.10.150.20 356 420 1.5E-22 T 22-04-2016 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:1.10.150.20 429 493 6.1E-24 T 22-04-2016 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF69705 1 126 2.49E-40 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.300.20 199 277 8.4E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF54814 201 278 6.34E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.300.20 278 347 1.2E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.2E-8 T 22-04-2016 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF13184 NusA-like KH domain 230 297 4.1E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.773 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:2.40.50.140 128 197 1.1E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.1480.10 1 124 3.7E-44 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 PANTHER PTHR22648 1 448 3.9E-186 T 22-04-2016 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF47794 429 492 1.0E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF08529 NusA N-terminal domain 4 123 1.7E-35 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF47794 356 415 7.06E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VP2457 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VP0485 10893457e6665da11bae7f970cfcf3b1 319 SUPERFAMILY SSF102114 13 268 1.02E-50 T 22-04-2016 VP0485 10893457e6665da11bae7f970cfcf3b1 319 SMART SM00729 23 247 4.8E-47 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VP0485 10893457e6665da11bae7f970cfcf3b1 319 Gene3D G3DSA:3.80.30.20 22 249 6.3E-34 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VP0485 10893457e6665da11bae7f970cfcf3b1 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 7.1E-135 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 VP0485 10893457e6665da11bae7f970cfcf3b1 319 PANTHER PTHR11135:SF1 1 291 3.2E-143 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 VP0485 10893457e6665da11bae7f970cfcf3b1 319 PANTHER PTHR11135 1 291 3.2E-143 T 22-04-2016 VP0485 10893457e6665da11bae7f970cfcf3b1 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 8.9E-17 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension VP0485 10893457e6665da11bae7f970cfcf3b1 319 Pfam PF04055 Radical SAM superfamily 43 202 1.4E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP0662 3a12db4b10a602c06ff905f503f87f94 519 PANTHER PTHR30282:SF1 5 519 0.0 T 22-04-2016 VP0662 3a12db4b10a602c06ff905f503f87f94 519 PANTHER PTHR30282 5 519 0.0 T 22-04-2016 VP0662 3a12db4b10a602c06ff905f503f87f94 519 Pfam PF03806 AbgT putative transporter family 19 517 2.3E-210 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VP2664 7d59f26153b5a2694bdcecc571de25f5 267 SUPERFAMILY SSF52540 6 239 4.96E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2664 7d59f26153b5a2694bdcecc571de25f5 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2664 7d59f26153b5a2694bdcecc571de25f5 267 Gene3D G3DSA:3.40.50.300 2 240 5.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2664 7d59f26153b5a2694bdcecc571de25f5 267 Pfam PF00005 ABC transporter 23 170 2.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2664 7d59f26153b5a2694bdcecc571de25f5 267 SMART SM00382 31 228 4.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2664 7d59f26153b5a2694bdcecc571de25f5 267 PANTHER PTHR24220:SF368 8 263 2.6E-185 T 22-04-2016 VP2664 7d59f26153b5a2694bdcecc571de25f5 267 PANTHER PTHR24220 8 263 2.6E-185 T 22-04-2016 VP0273 373e78b454ba8d0fb118e3d8020ad1d1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.5E-44 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0273 373e78b454ba8d0fb118e3d8020ad1d1 117 SUPERFAMILY SSF53137 3 115 6.54E-51 T 22-04-2016 VP0273 373e78b454ba8d0fb118e3d8020ad1d1 117 PANTHER PTHR12899 1 117 1.1E-46 T 22-04-2016 VP0273 373e78b454ba8d0fb118e3d8020ad1d1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.6E-43 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0273 373e78b454ba8d0fb118e3d8020ad1d1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.541 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0273 373e78b454ba8d0fb118e3d8020ad1d1 117 Gene3D G3DSA:3.30.420.100 24 117 2.3E-35 T 22-04-2016 VP2139 20bf20d9d22d11a93ac971f28942bead 202 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 67 139 1.8E-9 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin VP0506 b11c4f4d6dc5ca6ee1aaccf6838bee84 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.408 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 VP0506 b11c4f4d6dc5ca6ee1aaccf6838bee84 239 PANTHER PTHR18895 32 229 1.4E-68 T 22-04-2016 VP0506 b11c4f4d6dc5ca6ee1aaccf6838bee84 239 SUPERFAMILY SSF53335 35 190 6.87E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0506 b11c4f4d6dc5ca6ee1aaccf6838bee84 239 PANTHER PTHR18895:SF73 32 229 1.4E-68 T 22-04-2016 VP0506 b11c4f4d6dc5ca6ee1aaccf6838bee84 239 Pfam PF05175 Methyltransferase small domain 42 129 2.2E-16 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VP0506 b11c4f4d6dc5ca6ee1aaccf6838bee84 239 Gene3D G3DSA:3.40.50.150 30 229 4.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0506 b11c4f4d6dc5ca6ee1aaccf6838bee84 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP3013 a89aec30804c734399789187326fde0f 724 Gene3D G3DSA:1.10.486.10 389 542 5.4E-50 T 22-04-2016 VP3013 a89aec30804c734399789187326fde0f 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 2.5E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VP3013 a89aec30804c734399789187326fde0f 724 PANTHER PTHR11070:SF7 7 724 2.4E-243 T 22-04-2016 VP3013 a89aec30804c734399789187326fde0f 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 5.5E-80 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VP3013 a89aec30804c734399789187326fde0f 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VP3013 a89aec30804c734399789187326fde0f 724 Gene3D G3DSA:3.40.50.300 192 286 1.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3013 a89aec30804c734399789187326fde0f 724 Gene3D G3DSA:3.40.50.300 8 111 1.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3013 a89aec30804c734399789187326fde0f 724 Gene3D G3DSA:3.40.50.300 553 643 7.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3013 a89aec30804c734399789187326fde0f 724 Gene3D G3DSA:3.40.50.300 287 388 7.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3013 a89aec30804c734399789187326fde0f 724 Gene3D G3DSA:1.10.10.160 115 191 2.1E-23 T 22-04-2016 IPR013986 DExx box DNA helicase domain VP3013 a89aec30804c734399789187326fde0f 724 SUPERFAMILY SSF52540 8 643 1.05E-180 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3013 a89aec30804c734399789187326fde0f 724 PANTHER PTHR11070 7 724 2.4E-243 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 SUPERFAMILY SSF46689 221 270 4.93E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 Gene3D G3DSA:1.10.10.60 222 270 3.5E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 PANTHER PTHR11019:SF46 143 275 1.2E-31 T 22-04-2016 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 7.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 7.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 SMART SM00342 185 267 6.1E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 Pfam PF12833 Helix-turn-helix domain 191 269 2.5E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 PANTHER PTHR11019 143 275 1.2E-31 T 22-04-2016 VP1765 e8481f144e1bf951f04d4d13a67bd9a3 275 Gene3D G3DSA:1.10.10.60 167 221 6.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2375 a630e51f90b822a42741c945eae57838 1163 PANTHER PTHR30591 1 1161 0.0 T 22-04-2016 VP2375 a630e51f90b822a42741c945eae57838 1163 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1152 13.414 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VP2375 a630e51f90b822a42741c945eae57838 1163 SUPERFAMILY SSF52540 365 815 1.7E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2375 a630e51f90b822a42741c945eae57838 1163 SUPERFAMILY SSF52980 839 1145 1.88E-75 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VP2375 a630e51f90b822a42741c945eae57838 1163 PIRSF PIRSF000980 1 1161 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VP2375 a630e51f90b822a42741c945eae57838 1163 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 22-04-2016 VP2375 a630e51f90b822a42741c945eae57838 1163 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1122 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VP2375 a630e51f90b822a42741c945eae57838 1163 SUPERFAMILY SSF52540 2 351 2.07E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2375 a630e51f90b822a42741c945eae57838 1163 PANTHER PTHR30591:SF1 1 1161 0.0 T 22-04-2016 VP2375 a630e51f90b822a42741c945eae57838 1163 Gene3D G3DSA:3.40.50.300 351 456 1.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2375 a630e51f90b822a42741c945eae57838 1163 Gene3D G3DSA:3.40.50.300 662 758 1.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2375 a630e51f90b822a42741c945eae57838 1163 Gene3D G3DSA:1.10.10.160 86 178 1.0E-35 T 22-04-2016 IPR013986 DExx box DNA helicase domain VP2749 e2041def985ba5aeb05f62e1361f8e34 192 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 9.5E-11 T 22-04-2016 IPR007813 Fimbrial assembly PilN VP2749 e2041def985ba5aeb05f62e1361f8e34 192 PANTHER PTHR40278 1 185 1.8E-37 T 22-04-2016 VP2749 e2041def985ba5aeb05f62e1361f8e34 192 PANTHER PTHR40278:SF1 1 185 1.8E-37 T 22-04-2016 VP0726 3322f517f8b26f1e1dc8f5c550fa2418 180 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.377 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VP0726 3322f517f8b26f1e1dc8f5c550fa2418 180 PANTHER PTHR38098 3 166 3.3E-50 T 22-04-2016 VP0726 3322f517f8b26f1e1dc8f5c550fa2418 180 Gene3D G3DSA:3.30.160.150 22 167 1.6E-56 T 22-04-2016 VP0726 3322f517f8b26f1e1dc8f5c550fa2418 180 PANTHER PTHR38098:SF1 3 166 3.3E-50 T 22-04-2016 VP0726 3322f517f8b26f1e1dc8f5c550fa2418 180 Pfam PF04390 Lipopolysaccharide-assembly 13 159 2.3E-21 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 93 1.9E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 PANTHER PTHR11695 17 314 5.3E-82 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 1.8E-19 T 22-04-2016 VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 Gene3D G3DSA:3.90.180.10 3 153 5.1E-42 T 22-04-2016 IPR011032 GroES-like VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 PANTHER PTHR11695:SF294 17 314 5.3E-82 T 22-04-2016 VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 SUPERFAMILY SSF51735 123 243 1.03E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 SUPERFAMILY SSF50129 4 154 1.13E-34 T 22-04-2016 IPR011032 GroES-like VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 SMART SM00829 12 312 2.3E-13 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VP2542 317e1bcec2eb74b92fbda00eea5663c8 316 Gene3D G3DSA:3.40.50.720 154 238 3.4E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 PANTHER PTHR30519:SF0 1 760 0.0 T 22-04-2016 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 Gene3D G3DSA:3.20.20.210 392 760 3.9E-129 T 22-04-2016 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 SUPERFAMILY SSF51726 396 757 4.32E-113 T 22-04-2016 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 Gene3D G3DSA:3.20.20.210 4 386 4.2E-148 T 22-04-2016 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 PIRSF PIRSF000382 2 760 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 1.2E-121 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 6.5E-149 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 PANTHER PTHR30519 1 760 0.0 T 22-04-2016 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 758 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.987 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VP1974 81addb33fd47aa4abf8200ef58b20ca9 760 SUPERFAMILY SSF51726 5 393 2.88E-109 T 22-04-2016 VP2661 d2303323f0423e1f3766caf0cf953d91 212 PIRSF PIRSF004649 1 212 1.4E-56 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VP2661 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:1.10.10.640 78 112 9.2E-10 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VP2661 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:1.10.10.640 174 203 9.2E-10 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VP2661 d2303323f0423e1f3766caf0cf953d91 212 PANTHER PTHR36573 1 212 4.6E-64 T 22-04-2016 VP2661 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:3.10.450.50 27 71 3.9E-17 T 22-04-2016 IPR032710 NTF2-like domain VP2661 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:3.10.450.50 115 173 3.9E-17 T 22-04-2016 IPR032710 NTF2-like domain VP2661 d2303323f0423e1f3766caf0cf953d91 212 Pfam PF05494 MlaC protein 33 200 7.9E-46 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54980 402 479 5.4E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SMART SM00838 598 685 3.7E-47 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 2.6E-60 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.70.870 404 478 1.9E-32 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SMART SM00889 478 596 9.9E-59 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.0E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54980 601 690 1.76E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF00679 Elongation factor G C-terminus 598 684 1.3E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.70.240 598 683 1.1E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF14492 Elongation Factor G, domain II 402 475 2.0E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 100.212 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF52540 3 279 4.29E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF50447 262 400 2.05E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.40.50.300 2 284 7.4E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115 252 280 0.0 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115 302 689 0.0 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115 3 174 0.0 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF03764 Elongation factor G, domain IV 477 595 2.5E-41 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.230.10 482 597 9.4E-43 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 690 1.7E-288 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115:SF154 252 280 0.0 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115:SF154 302 689 0.0 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115:SF154 3 174 0.0 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:2.40.30.10 305 403 1.2E-35 T 22-04-2016 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 9.9E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2428 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54211 477 596 2.38E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPA1010 22e7e9924258631b2db844b173186aa5 189 SUPERFAMILY SSF56601 7 188 8.3E-44 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPA1010 22e7e9924258631b2db844b173186aa5 189 Pfam PF00144 Beta-lactamase 2 145 2.0E-19 T 22-04-2016 IPR001466 Beta-lactamase-related VPA1010 22e7e9924258631b2db844b173186aa5 189 Gene3D G3DSA:3.40.710.10 4 172 5.9E-32 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPA1010 22e7e9924258631b2db844b173186aa5 189 PANTHER PTHR22935 7 172 4.1E-26 T 22-04-2016 VP1145 f2aa9b1199e77d53dbfbbebcd34a652d 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 22-04-2016 VP1145 f2aa9b1199e77d53dbfbbebcd34a652d 167 PANTHER PTHR33747:SF1 9 167 2.4E-31 T 22-04-2016 VP1145 f2aa9b1199e77d53dbfbbebcd34a652d 167 Pfam PF02810 SEC-C motif 4 18 1.2E-4 T 22-04-2016 IPR004027 SEC-C motif VP1145 f2aa9b1199e77d53dbfbbebcd34a652d 167 Pfam PF02810 SEC-C motif 150 167 4.2E-10 T 22-04-2016 IPR004027 SEC-C motif VP1145 f2aa9b1199e77d53dbfbbebcd34a652d 167 SUPERFAMILY SSF54427 28 128 7.36E-34 T 22-04-2016 IPR032710 NTF2-like domain VP1145 f2aa9b1199e77d53dbfbbebcd34a652d 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.259 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 VP1145 f2aa9b1199e77d53dbfbbebcd34a652d 167 PANTHER PTHR33747 9 167 2.4E-31 T 22-04-2016 VP1145 f2aa9b1199e77d53dbfbbebcd34a652d 167 Gene3D G3DSA:3.10.450.50 3 167 6.7E-56 T 22-04-2016 IPR032710 NTF2-like domain VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 SUPERFAMILY SSF50621 257 391 2.23E-39 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 Pfam PF01168 Alanine racemase, N-terminal domain 33 256 3.4E-46 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PANTHER PTHR30511 23 392 7.2E-110 T 22-04-2016 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 57 67 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 TIGRFAM TIGR00492 alr: alanine racemase 29 378 6.9E-66 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 Gene3D G3DSA:2.40.37.10 246 391 1.3E-45 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 SMART SM01005 264 392 1.6E-45 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 Gene3D G3DSA:3.20.20.10 36 245 7.2E-47 T 22-04-2016 IPR029066 PLP-binding barrel VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PANTHER PTHR30511:SF0 23 392 7.2E-110 T 22-04-2016 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 Hamap MF_01201 Alanine racemase. 26 392 24.952 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 SUPERFAMILY SSF51419 33 264 1.96E-44 T 22-04-2016 IPR029066 PLP-binding barrel VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PRINTS PR00992 Alanine racemase signature 229 256 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PRINTS PR00992 Alanine racemase signature 52 68 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PRINTS PR00992 Alanine racemase signature 297 312 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PRINTS PR00992 Alanine racemase signature 150 162 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PRINTS PR00992 Alanine racemase signature 318 335 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PRINTS PR00992 Alanine racemase signature 88 106 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 PRINTS PR00992 Alanine racemase signature 186 197 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2848 5c6a7f300c4d1f70130cf339995b9df8 392 Pfam PF00842 Alanine racemase, C-terminal domain 265 391 1.9E-27 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP1290 eb900ee23572d75484c6b86ab2cf9072 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.953 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VP1290 eb900ee23572d75484c6b86ab2cf9072 327 PANTHER PTHR11538 92 327 1.3E-113 T 22-04-2016 VP1290 eb900ee23572d75484c6b86ab2cf9072 327 SUPERFAMILY SSF55681 92 327 1.63E-82 T 22-04-2016 VP1290 eb900ee23572d75484c6b86ab2cf9072 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.4E-106 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VP1290 eb900ee23572d75484c6b86ab2cf9072 327 SUPERFAMILY SSF46589 14 99 1.57E-22 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VP1290 eb900ee23572d75484c6b86ab2cf9072 327 Gene3D G3DSA:3.30.930.10 10 327 1.5E-133 T 22-04-2016 VP1290 eb900ee23572d75484c6b86ab2cf9072 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.0E-111 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VP1290 eb900ee23572d75484c6b86ab2cf9072 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.6E-25 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 Gene3D G3DSA:1.10.1270.10 2 96 3.5E-37 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 Pfam PF01371 Trp repressor protein 9 93 4.9E-33 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 Hamap MF_00475 Trp operon repressor [trpR]. 6 103 23.815 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 88 5.7E-25 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 PANTHER PTHR38025 1 100 1.1E-34 T 22-04-2016 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 PIRSF PIRSF003196 1 100 1.8E-39 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 SUPERFAMILY SSF48295 2 94 1.1E-28 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 PANTHER PTHR38025:SF1 1 100 1.1E-34 T 22-04-2016 VP0553 c12396daaa9dd101ebdabd47d75487c2 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 2.0E-37 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VP1651 ebefb2e166dcf6034e0f8b281f12220a 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 320 1.8E-26 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 VP1651 ebefb2e166dcf6034e0f8b281f12220a 323 PANTHER PTHR30349 1 283 6.0E-102 T 22-04-2016 VP1651 ebefb2e166dcf6034e0f8b281f12220a 323 PIRSF PIRSF017082 2 323 2.2E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 VP1651 ebefb2e166dcf6034e0f8b281f12220a 323 PANTHER PTHR30349:SF25 1 283 6.0E-102 T 22-04-2016 VP1651 ebefb2e166dcf6034e0f8b281f12220a 323 Gene3D G3DSA:3.40.50.1820 108 202 5.0E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1651 ebefb2e166dcf6034e0f8b281f12220a 323 SUPERFAMILY SSF53850 105 289 5.16E-8 T 22-04-2016 VP1724 90d33376f1dcc8077c5b4551b59984ae 248 Gene3D G3DSA:3.30.420.10 51 240 2.2E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1724 90d33376f1dcc8077c5b4551b59984ae 248 PANTHER PTHR30231 22 236 2.2E-70 T 22-04-2016 VP1724 90d33376f1dcc8077c5b4551b59984ae 248 SMART SM00479 57 238 3.8E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP1724 90d33376f1dcc8077c5b4551b59984ae 248 PANTHER PTHR30231:SF11 22 236 2.2E-70 T 22-04-2016 VP1724 90d33376f1dcc8077c5b4551b59984ae 248 SUPERFAMILY SSF53098 50 238 2.8E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1724 90d33376f1dcc8077c5b4551b59984ae 248 Pfam PF00929 Exonuclease 59 229 5.1E-17 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP2262 ca318126169b7d58b8fb1ff2d120471a 300 SUPERFAMILY SSF54909 1 297 3.93E-93 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP2262 ca318126169b7d58b8fb1ff2d120471a 300 Pfam PF04261 Dyp-type peroxidase family 5 293 4.3E-88 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VP2262 ca318126169b7d58b8fb1ff2d120471a 300 PANTHER PTHR30521 23 297 3.0E-109 T 22-04-2016 VP2262 ca318126169b7d58b8fb1ff2d120471a 300 PANTHER PTHR30521:SF0 23 297 3.0E-109 T 22-04-2016 VP2262 ca318126169b7d58b8fb1ff2d120471a 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 4.4E-83 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VP1312 15d01bd757b5cf332ea0db5d70a6c38e 255 SUPERFAMILY SSF52540 16 230 7.31E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1312 15d01bd757b5cf332ea0db5d70a6c38e 255 SMART SM00382 22 217 5.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1312 15d01bd757b5cf332ea0db5d70a6c38e 255 Pfam PF00005 ABC transporter 15 168 6.5E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1312 15d01bd757b5cf332ea0db5d70a6c38e 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 2 255 48.586 T 22-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VP1312 15d01bd757b5cf332ea0db5d70a6c38e 255 PANTHER PTHR24220 1 237 2.2E-82 T 22-04-2016 VP1312 15d01bd757b5cf332ea0db5d70a6c38e 255 Gene3D G3DSA:3.40.50.300 16 240 6.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1312 15d01bd757b5cf332ea0db5d70a6c38e 255 PANTHER PTHR24220:SF547 1 237 2.2E-82 T 22-04-2016 VP2204 7fc4a36b336ad2d9db81a215acc3abe1 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.373 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 VP2204 7fc4a36b336ad2d9db81a215acc3abe1 176 PANTHER PTHR35562 1 175 1.4E-102 T 22-04-2016 VP2204 7fc4a36b336ad2d9db81a215acc3abe1 176 PANTHER PTHR35562:SF1 1 175 1.4E-102 T 22-04-2016 VP2204 7fc4a36b336ad2d9db81a215acc3abe1 176 SMART SM00463 94 172 1.5E-15 T 22-04-2016 IPR002625 Smr domain VP2204 7fc4a36b336ad2d9db81a215acc3abe1 176 SUPERFAMILY SSF160443 95 171 2.48E-11 T 22-04-2016 IPR002625 Smr domain VP2204 7fc4a36b336ad2d9db81a215acc3abe1 176 Pfam PF01713 Smr domain 97 171 2.5E-17 T 22-04-2016 IPR002625 Smr domain VP0554 998e3ce92a5783fafa54d92a9d593672 182 Gene3D G3DSA:3.90.950.10 10 177 3.9E-64 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VP0554 998e3ce92a5783fafa54d92a9d593672 182 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 13 176 2.8E-45 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase VP0554 998e3ce92a5783fafa54d92a9d593672 182 Pfam PF01931 Protein of unknown function DUF84 14 172 5.9E-58 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VP0554 998e3ce92a5783fafa54d92a9d593672 182 SUPERFAMILY SSF52972 9 178 4.36E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VP0554 998e3ce92a5783fafa54d92a9d593672 182 Hamap MF_00648 Non-canonical purine NTP phosphatase. 9 178 29.786 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase VP0554 998e3ce92a5783fafa54d92a9d593672 182 PANTHER PTHR34699:SF3 4 181 6.8E-91 T 22-04-2016 VP0554 998e3ce92a5783fafa54d92a9d593672 182 PANTHER PTHR34699 4 181 6.8E-91 T 22-04-2016 VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 SUPERFAMILY SSF53850 3 255 2.91E-69 T 22-04-2016 VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 SMART SM00062 28 254 2.6E-70 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 Gene3D G3DSA:3.40.190.10 9 137 1.2E-44 T 22-04-2016 VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 SMART SM00079 28 253 3.5E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 Gene3D G3DSA:3.40.190.10 138 211 3.5E-23 T 22-04-2016 VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 9 251 6.1E-81 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 PANTHER PTHR18966:SF152 20 251 1.3E-55 T 22-04-2016 VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 252 1.1E-61 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0999 a5c9c0541c8707f980c11730bbd5f42e 258 PANTHER PTHR18966 20 251 1.3E-55 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 786 3.6E-168 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 SUPERFAMILY SSF53955 43 256 9.0E-78 T 22-04-2016 IPR023346 Lysozyme-like domain VP2751 6ad839e2bd0100419af3d110541e0d74 856 SUPERFAMILY SSF56601 432 620 5.99E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2751 6ad839e2bd0100419af3d110541e0d74 856 SUPERFAMILY SSF56601 211 233 5.99E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2751 6ad839e2bd0100419af3d110541e0d74 856 SUPERFAMILY SSF56601 667 836 5.99E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2751 6ad839e2bd0100419af3d110541e0d74 856 SUPERFAMILY SSF56601 262 314 5.99E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2751 6ad839e2bd0100419af3d110541e0d74 856 Gene3D G3DSA:1.10.3810.10 55 231 1.3E-73 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 Gene3D G3DSA:3.40.710.10 232 314 3.9E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2751 6ad839e2bd0100419af3d110541e0d74 856 Gene3D G3DSA:3.40.710.10 668 835 3.9E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2751 6ad839e2bd0100419af3d110541e0d74 856 Gene3D G3DSA:3.40.710.10 432 621 3.9E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2751 6ad839e2bd0100419af3d110541e0d74 856 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 743 1.1E-26 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VP2751 6ad839e2bd0100419af3d110541e0d74 856 Gene3D G3DSA:2.40.50.140 348 431 1.2E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2751 6ad839e2bd0100419af3d110541e0d74 856 Pfam PF17092 Penicillin-binding protein OB-like domain 317 434 2.9E-32 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 VP2751 6ad839e2bd0100419af3d110541e0d74 856 PANTHER PTHR32282 431 622 5.7E-271 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 PANTHER PTHR32282:SF5 667 751 5.7E-271 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 PANTHER PTHR32282:SF5 768 834 5.7E-271 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 Pfam PF00912 Transglycosylase 55 229 3.6E-63 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VP2751 6ad839e2bd0100419af3d110541e0d74 856 PANTHER PTHR32282:SF5 431 622 5.7E-271 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 PANTHER PTHR32282:SF5 2 311 5.7E-271 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 PANTHER PTHR32282 667 751 5.7E-271 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 PANTHER PTHR32282 768 834 5.7E-271 T 22-04-2016 VP2751 6ad839e2bd0100419af3d110541e0d74 856 PANTHER PTHR32282 2 311 5.7E-271 T 22-04-2016 VP1980 82377624432ea6d264f8a8d63b1623a1 777 Pfam PF11842 Domain of unknown function (DUF3362) 585 723 3.2E-42 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal VP1980 82377624432ea6d264f8a8d63b1623a1 777 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 686 48.043 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 VP1980 82377624432ea6d264f8a8d63b1623a1 777 SMART SM00729 367 617 1.6E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VP1980 82377624432ea6d264f8a8d63b1623a1 777 SUPERFAMILY SSF102114 370 431 4.58E-11 T 22-04-2016 VP1980 82377624432ea6d264f8a8d63b1623a1 777 SUPERFAMILY SSF102114 461 605 4.58E-11 T 22-04-2016 VP1980 82377624432ea6d264f8a8d63b1623a1 777 Pfam PF08497 Radical SAM N-terminal 24 370 8.4E-143 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal VP1980 82377624432ea6d264f8a8d63b1623a1 777 PANTHER PTHR32331 3 716 0.0 T 22-04-2016 VP1980 82377624432ea6d264f8a8d63b1623a1 777 Pfam PF04055 Radical SAM superfamily 371 576 6.8E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP1980 82377624432ea6d264f8a8d63b1623a1 777 Gene3D G3DSA:3.80.30.20 365 614 2.8E-47 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VP1980 82377624432ea6d264f8a8d63b1623a1 777 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VP1980 82377624432ea6d264f8a8d63b1623a1 777 PANTHER PTHR32331:SF3 3 716 0.0 T 22-04-2016 VP1980 82377624432ea6d264f8a8d63b1623a1 777 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 1.5E-262 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 VP0547 6fc3712b24183d2643af58434e1429af 375 Pfam PF01817 Chorismate mutase type II 9 87 1.3E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VP0547 6fc3712b24183d2643af58434e1429af 375 Gene3D G3DSA:1.20.59.10 4 83 5.2E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VP0547 6fc3712b24183d2643af58434e1429af 375 SUPERFAMILY SSF51735 91 237 2.13E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0547 6fc3712b24183d2643af58434e1429af 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 9.6E-43 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VP0547 6fc3712b24183d2643af58434e1429af 375 SMART SM00830 9 89 3.7E-29 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VP0547 6fc3712b24183d2643af58434e1429af 375 SUPERFAMILY SSF48179 241 366 1.07E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP0547 6fc3712b24183d2643af58434e1429af 375 PANTHER PTHR21363 88 372 1.7E-73 T 22-04-2016 VP0547 6fc3712b24183d2643af58434e1429af 375 Gene3D G3DSA:3.40.50.720 84 247 1.4E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0547 6fc3712b24183d2643af58434e1429af 375 SUPERFAMILY SSF48600 4 88 4.4E-24 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VP0547 6fc3712b24183d2643af58434e1429af 375 Pfam PF02153 Prephenate dehydrogenase 132 344 1.0E-32 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VP0547 6fc3712b24183d2643af58434e1429af 375 PANTHER PTHR21363:SF0 88 372 1.7E-73 T 22-04-2016 VP0547 6fc3712b24183d2643af58434e1429af 375 PIRSF PIRSF001499 1 374 1.0E-186 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VP0547 6fc3712b24183d2643af58434e1429af 375 Gene3D G3DSA:1.10.3660.10 249 373 2.1E-55 T 22-04-2016 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 SUPERFAMILY SSF52172 183 306 9.39E-26 T 22-04-2016 IPR011006 CheY-like superfamily VP0773 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:3.40.50.2300 183 307 3.0E-27 T 22-04-2016 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 PANTHER PTHR22617:SF30 1 169 1.1E-105 T 22-04-2016 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 PANTHER PTHR22617 1 169 1.1E-105 T 22-04-2016 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:2.30.30.40 89 145 5.5E-4 T 22-04-2016 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 Pfam PF01584 CheW-like domain 21 155 5.4E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 PIRSF PIRSF002867 1 308 1.8E-103 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV VP0773 3bc9cdab10bd865c7d73590857f09d17 308 SMART SM00448 182 302 6.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 SUPERFAMILY SSF50341 16 157 1.7E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 Pfam PF00072 Response regulator receiver domain 184 302 2.5E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0773 3bc9cdab10bd865c7d73590857f09d17 308 SMART SM00260 17 153 1.3E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP0300 03d8849d66eb42b647d01ae836f1f278 419 PANTHER PTHR30489:SF2 3 204 4.7E-109 T 22-04-2016 VP0300 03d8849d66eb42b647d01ae836f1f278 419 PANTHER PTHR30489 3 204 4.7E-109 T 22-04-2016 VP0300 03d8849d66eb42b647d01ae836f1f278 419 PANTHER PTHR30489 224 418 4.7E-109 T 22-04-2016 VP0300 03d8849d66eb42b647d01ae836f1f278 419 PANTHER PTHR30489:SF2 224 418 4.7E-109 T 22-04-2016 VP0300 03d8849d66eb42b647d01ae836f1f278 419 Pfam PF02687 FtsX-like permease family 293 410 1.1E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VP0300 03d8849d66eb42b647d01ae836f1f278 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 1.6E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 PIRSF PIRSF000456 4 262 1.0E-95 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.8E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 3.4E-5 T 22-04-2016 IPR001451 Hexapeptide repeat VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 5.1E-95 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 PANTHER PTHR23416:SF8 1 254 9.9E-118 T 22-04-2016 VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Gene3D G3DSA:1.20.1180.10 209 262 1.2E-23 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.67 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Gene3D G3DSA:2.160.10.10 94 208 3.2E-24 T 22-04-2016 VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 SUPERFAMILY SSF51161 1 262 5.99E-74 T 22-04-2016 IPR011004 Trimeric LpxA-like VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 PANTHER PTHR23416 1 254 9.9E-118 T 22-04-2016 VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.7E-25 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VP2306 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Gene3D G3DSA:2.160.10.10 2 93 5.2E-22 T 22-04-2016 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 Gene3D G3DSA:3.30.830.10 743 925 3.6E-25 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 Gene3D G3DSA:3.30.830.10 46 263 2.1E-58 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 Gene3D G3DSA:3.30.830.10 517 730 1.1E-47 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 PANTHER PTHR11851:SF136 23 863 8.1E-271 T 22-04-2016 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 SUPERFAMILY SSF63411 274 464 1.4E-31 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 Gene3D G3DSA:3.30.830.10 279 458 2.1E-23 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 SUPERFAMILY SSF63411 515 717 1.29E-43 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 Pfam PF05193 Peptidase M16 inactive domain 215 390 3.9E-29 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 Pfam PF05193 Peptidase M16 inactive domain 682 853 2.4E-22 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 Pfam PF00675 Insulinase (Peptidase family M16) 65 150 1.3E-16 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 2.5E-10 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 PANTHER PTHR11851 23 863 8.1E-271 T 22-04-2016 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 SUPERFAMILY SSF63411 45 254 3.83E-55 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2540 42243f07b0942e3a6f5ddb61f3bf1994 947 SUPERFAMILY SSF63411 735 936 2.83E-42 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VP2707 7d4d99f4df1836a795e097eac6e0a5b0 481 SUPERFAMILY SSF53067 40 154 2.33E-11 T 22-04-2016 VP2707 7d4d99f4df1836a795e097eac6e0a5b0 481 PIRSF PIRSF028153 1 481 1.7E-237 T 22-04-2016 IPR016871 MSHA biogenesis protein, MshI VP2234 19d6e4cea219ab53362db6c43788694c 503 SUPERFAMILY SSF52540 286 477 1.38E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2234 19d6e4cea219ab53362db6c43788694c 503 SMART SM00382 289 442 7.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2234 19d6e4cea219ab53362db6c43788694c 503 PANTHER PTHR11564:SF3 198 480 2.2E-94 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VP2234 19d6e4cea219ab53362db6c43788694c 503 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 378 7.2E-86 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VP2234 19d6e4cea219ab53362db6c43788694c 503 PANTHER PTHR11564 198 480 2.2E-94 T 22-04-2016 VP2234 19d6e4cea219ab53362db6c43788694c 503 Pfam PF00448 SRP54-type protein, GTPase domain 292 479 2.8E-38 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VP2234 19d6e4cea219ab53362db6c43788694c 503 SMART SM00962 290 483 1.3E-63 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VP2234 19d6e4cea219ab53362db6c43788694c 503 Gene3D G3DSA:3.40.50.300 289 479 6.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0608 2a1c9cf936173486e5e299c939d694f9 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 7.6E-127 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VP0608 2a1c9cf936173486e5e299c939d694f9 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.147 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VP0608 2a1c9cf936173486e5e299c939d694f9 372 SUPERFAMILY SSF51717 15 208 7.3E-11 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VP0608 2a1c9cf936173486e5e299c939d694f9 372 PANTHER PTHR30454 1 368 6.7E-225 T 22-04-2016 VP0608 2a1c9cf936173486e5e299c939d694f9 372 Pfam PF04551 GcpE protein 14 354 2.3E-132 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VP0608 2a1c9cf936173486e5e299c939d694f9 372 SUPERFAMILY SSF56014 265 354 4.11E-11 T 22-04-2016 VP0608 2a1c9cf936173486e5e299c939d694f9 372 PIRSF PIRSF004640 1 364 1.6E-147 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VP0608 2a1c9cf936173486e5e299c939d694f9 372 Gene3D G3DSA:3.20.20.70 29 132 2.7E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0486 a462dc3e568fb9eedff4022840bc9118 581 PANTHER PTHR10799:SF728 1 113 1.0E-27 T 22-04-2016 VP0486 a462dc3e568fb9eedff4022840bc9118 581 PANTHER PTHR10799:SF728 445 573 1.0E-27 T 22-04-2016 VP0486 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00267 401 577 9.4E-65 T 22-04-2016 IPR000160 GGDEF domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55785 266 392 1.24E-18 T 22-04-2016 IPR000014 PAS domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 1.2E-49 T 22-04-2016 IPR000160 GGDEF domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF08448 PAS fold 285 395 1.4E-13 T 22-04-2016 IPR013656 PAS fold-4 VP0486 a462dc3e568fb9eedff4022840bc9118 581 PANTHER PTHR10799 1 113 1.0E-27 T 22-04-2016 VP0486 a462dc3e568fb9eedff4022840bc9118 581 PANTHER PTHR10799 445 573 1.0E-27 T 22-04-2016 VP0486 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.450.20 266 392 8.2E-19 T 22-04-2016 VP0486 a462dc3e568fb9eedff4022840bc9118 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 575 5.3E-48 T 22-04-2016 IPR000160 GGDEF domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 38 108 28.0 T 22-04-2016 IPR000014 PAS domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 158 223 22.0 T 22-04-2016 IPR000014 PAS domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 279 346 0.075 T 22-04-2016 IPR000014 PAS domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55785 150 251 9.42E-7 T 22-04-2016 IPR000014 PAS domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55073 417 577 4.39E-47 T 22-04-2016 IPR029787 Nucleotide cyclase VP0486 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.70.270 414 577 2.1E-51 T 22-04-2016 VP0486 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.450.20 212 264 5.9E-4 T 22-04-2016 VP0486 a462dc3e568fb9eedff4022840bc9118 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 2.4E-14 T 22-04-2016 IPR000014 PAS domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF13188 PAS domain 40 78 5.4E-4 T 22-04-2016 IPR000014 PAS domain VP0486 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.450.20 149 208 5.9E-5 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 SUPERFAMILY SSF51971 126 285 4.36E-39 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 SUPERFAMILY SSF51971 10 78 4.36E-39 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 SUPERFAMILY SSF51971 346 405 4.36E-39 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 Gene3D G3DSA:3.50.50.60 116 138 8.7E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1331 e9557bea06f676f72640e1862fff49e3 418 Gene3D G3DSA:3.50.50.60 361 417 8.7E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1331 e9557bea06f676f72640e1862fff49e3 418 Gene3D G3DSA:3.50.50.60 197 271 8.7E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1331 e9557bea06f676f72640e1862fff49e3 418 Gene3D G3DSA:3.50.50.60 10 66 8.7E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1331 e9557bea06f676f72640e1862fff49e3 418 PANTHER PTHR13847 115 417 1.0E-45 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 PANTHER PTHR13847 12 68 1.0E-45 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 Gene3D G3DSA:3.30.9.10 272 312 9.6E-5 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 Gene3D G3DSA:3.30.9.10 144 196 9.6E-5 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 SUPERFAMILY SSF54373 273 360 1.83E-9 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 PANTHER PTHR13847:SF216 115 417 1.0E-45 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 PANTHER PTHR13847:SF216 12 68 1.0E-45 T 22-04-2016 VP1331 e9557bea06f676f72640e1862fff49e3 418 Pfam PF01266 FAD dependent oxidoreductase 12 399 5.3E-51 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VP0454 c37b28e044031c2eb74be9454a42cca5 597 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 245 3.1E-20 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VP0454 c37b28e044031c2eb74be9454a42cca5 597 PANTHER PTHR30627 32 597 1.3E-218 T 22-04-2016 VP0454 c37b28e044031c2eb74be9454a42cca5 597 SUPERFAMILY SSF56519 86 258 5.23E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VP0454 c37b28e044031c2eb74be9454a42cca5 597 SUPERFAMILY SSF56601 260 591 1.99E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP0454 c37b28e044031c2eb74be9454a42cca5 597 Gene3D G3DSA:3.40.710.10 266 586 2.2E-88 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP0454 c37b28e044031c2eb74be9454a42cca5 597 Gene3D G3DSA:3.90.1310.10 166 265 3.6E-33 T 22-04-2016 VP0454 c37b28e044031c2eb74be9454a42cca5 597 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 580 2.1E-74 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VP0454 c37b28e044031c2eb74be9454a42cca5 597 PANTHER PTHR30627:SF1 32 597 1.3E-218 T 22-04-2016 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 PANTHER PTHR30075 1 688 0.0 T 22-04-2016 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 Pfam PF05746 DALR anticodon binding domain 580 677 3.0E-10 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.983 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 SUPERFAMILY SSF109604 350 489 4.55E-12 T 22-04-2016 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 Gene3D G3DSA:1.10.730.10 582 676 5.3E-7 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.8E-297 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0021 c8c1da41785d240d4c5962bd8eaca6f8 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 1.2E-205 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP1332 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 PANTHER PTHR30222:SF2 9 354 7.5E-92 T 22-04-2016 VP1332 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 PANTHER PTHR30222 9 354 7.5E-92 T 22-04-2016 VP1332 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 Gene3D G3DSA:3.40.190.10 140 278 1.5E-26 T 22-04-2016 VP1332 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 Pfam PF13416 Bacterial extracellular solute-binding protein 46 319 1.3E-35 T 22-04-2016 VP1332 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 Gene3D G3DSA:3.40.190.10 279 322 1.0E-17 T 22-04-2016 VP1332 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 Gene3D G3DSA:3.40.190.10 24 139 1.0E-17 T 22-04-2016 VP1332 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 SUPERFAMILY SSF53850 25 355 4.8E-60 T 22-04-2016 VP2762 4cf93ac04495568eca1b69696611cc25 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 8.3E-16 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal VP2762 4cf93ac04495568eca1b69696611cc25 179 PANTHER PTHR33169 1 176 4.2E-68 T 22-04-2016 VP2762 4cf93ac04495568eca1b69696611cc25 179 SUPERFAMILY SSF46785 3 176 1.04E-43 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2762 4cf93ac04495568eca1b69696611cc25 179 Gene3D G3DSA:1.10.10.10 1 87 8.3E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2762 4cf93ac04495568eca1b69696611cc25 179 PANTHER PTHR33169:SF4 1 176 4.2E-68 T 22-04-2016 VP2762 4cf93ac04495568eca1b69696611cc25 179 Pfam PF10400 Virulence activator alpha C-term 92 176 6.5E-15 T 22-04-2016 IPR018309 Transcription regulator PadR, C-terminal VPA1244 890d2d966e878c516fa4b806e5009294 60 PANTHER PTHR24222:SF30 1 60 1.5E-16 T 22-04-2016 VPA1244 890d2d966e878c516fa4b806e5009294 60 PANTHER PTHR24222 1 60 1.5E-16 T 22-04-2016 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:1.10.150.20 169 238 1.3E-23 T 22-04-2016 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:3.30.1490.100 241 354 4.0E-41 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 SUPERFAMILY SSF56672 4 238 4.8E-92 T 22-04-2016 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.67 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF11798 IMS family HHH motif 170 200 7.7E-6 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 PANTHER PTHR11076 1 354 2.0E-196 T 22-04-2016 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF00817 impB/mucB/samB family 11 158 1.7E-47 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:3.30.70.270 70 168 4.3E-35 T 22-04-2016 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 PANTHER PTHR11076:SF32 1 354 2.0E-196 T 22-04-2016 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 1.1E-5 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2342 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 SUPERFAMILY SSF100879 245 353 1.06E-24 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0278 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0278 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0278 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 8.8E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0278 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0278 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0278 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 22-04-2016 VP0278 756d9a7dbdd6c76983597e7873ac5986 37 PANTHER PTHR18804 1 37 3.4E-18 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2792 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VP2792 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VP2792 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VP2792 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VP2792 226ad5b10ad81930190a037fe9085522 289 SUPERFAMILY SSF52540 4 286 3.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2792 226ad5b10ad81930190a037fe9085522 289 Gene3D G3DSA:3.40.50.300 1 288 1.8E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2792 226ad5b10ad81930190a037fe9085522 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.7E-69 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VP2792 226ad5b10ad81930190a037fe9085522 289 PANTHER PTHR10285 1 284 1.2E-151 T 22-04-2016 VP2792 226ad5b10ad81930190a037fe9085522 289 PANTHER PTHR10285:SF72 1 284 1.2E-151 T 22-04-2016 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 1.2E-21 T 22-04-2016 IPR033248 Transketolase, C-terminal domain VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 SUPERFAMILY SSF52518 333 526 6.34E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 9.3E-48 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 SUPERFAMILY SSF52518 6 319 5.09E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 SMART SM00861 354 525 1.0E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 5.2E-166 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 PANTHER PTHR11624 1 309 0.0 T 22-04-2016 IPR033247 Transketolase family VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 PANTHER PTHR11624 333 663 0.0 T 22-04-2016 IPR033247 Transketolase family VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 Gene3D G3DSA:3.40.50.920 538 663 2.0E-52 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 PANTHER PTHR11624:SF85 1 309 0.0 T 22-04-2016 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 PANTHER PTHR11624:SF85 333 663 0.0 T 22-04-2016 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 Gene3D G3DSA:3.40.50.970 4 318 1.4E-132 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 SUPERFAMILY SSF52922 533 664 1.44E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VP2605 54ac1d0eaaa093bae1e5edab508c2dd4 664 Gene3D G3DSA:3.40.50.970 327 533 3.2E-81 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0449 161d43b00b4ac78eeb3f4749df762d38 603 Pfam PF04348 LppC putative lipoprotein 40 599 5.8E-162 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VP0449 161d43b00b4ac78eeb3f4749df762d38 603 Gene3D G3DSA:3.40.50.2300 256 368 6.7E-53 T 22-04-2016 VP0449 161d43b00b4ac78eeb3f4749df762d38 603 Gene3D G3DSA:3.40.50.2300 533 596 6.7E-53 T 22-04-2016 VP0449 161d43b00b4ac78eeb3f4749df762d38 603 PANTHER PTHR38038:SF1 1 599 7.6E-164 T 22-04-2016 VP0449 161d43b00b4ac78eeb3f4749df762d38 603 SUPERFAMILY SSF53822 456 599 2.4E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP0449 161d43b00b4ac78eeb3f4749df762d38 603 SUPERFAMILY SSF53822 260 428 2.4E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP0449 161d43b00b4ac78eeb3f4749df762d38 603 PANTHER PTHR38038 1 599 7.6E-164 T 22-04-2016 VP0449 161d43b00b4ac78eeb3f4749df762d38 603 Gene3D G3DSA:3.40.50.2300 369 532 7.9E-48 T 22-04-2016 VP0449 161d43b00b4ac78eeb3f4749df762d38 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 29.856 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VP1200 26bdec815973fb4dec0ec02bb833347d 327 SUPERFAMILY SSF52821 194 314 1.96E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VP1200 26bdec815973fb4dec0ec02bb833347d 327 ProSitePatterns PS00683 Rhodanese C-terminal signature. 298 308 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 VP1200 26bdec815973fb4dec0ec02bb833347d 327 Gene3D G3DSA:3.40.250.10 44 184 7.7E-24 T 22-04-2016 IPR001763 Rhodanese-like domain VP1200 26bdec815973fb4dec0ec02bb833347d 327 SMART SM00450 16 169 0.0028 T 22-04-2016 IPR001763 Rhodanese-like domain VP1200 26bdec815973fb4dec0ec02bb833347d 327 SMART SM00450 195 314 1.9E-17 T 22-04-2016 IPR001763 Rhodanese-like domain VP1200 26bdec815973fb4dec0ec02bb833347d 327 SUPERFAMILY SSF52821 45 182 4.85E-22 T 22-04-2016 IPR001763 Rhodanese-like domain VP1200 26bdec815973fb4dec0ec02bb833347d 327 Gene3D G3DSA:3.40.250.10 192 314 4.1E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VP1200 26bdec815973fb4dec0ec02bb833347d 327 PANTHER PTHR11364 108 309 1.9E-45 T 22-04-2016 VP1200 26bdec815973fb4dec0ec02bb833347d 327 Pfam PF00581 Rhodanese-like domain 201 309 8.4E-13 T 22-04-2016 IPR001763 Rhodanese-like domain VP1200 26bdec815973fb4dec0ec02bb833347d 327 Pfam PF00581 Rhodanese-like domain 81 164 1.9E-8 T 22-04-2016 IPR001763 Rhodanese-like domain VP2758 746afaaf63e0e338a2d45366a053cdb8 263 Gene3D G3DSA:3.40.1160.10 7 260 7.2E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2758 746afaaf63e0e338a2d45366a053cdb8 263 PIRSF PIRSF000728 1 263 1.5E-69 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2758 746afaaf63e0e338a2d45366a053cdb8 263 Pfam PF00696 Amino acid kinase family 9 238 2.0E-35 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2758 746afaaf63e0e338a2d45366a053cdb8 263 Hamap MF_00082_B Acetylglutamate kinase [argB]. 5 262 26.315 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2758 746afaaf63e0e338a2d45366a053cdb8 263 PANTHER PTHR23342 8 262 3.2E-83 T 22-04-2016 VP2758 746afaaf63e0e338a2d45366a053cdb8 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.0E-62 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2758 746afaaf63e0e338a2d45366a053cdb8 263 SUPERFAMILY SSF53633 9 261 2.09E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP1510 97aafb463f47f2406825a18f865ed0e6 553 PANTHER PTHR24960:SF43 88 244 3.3E-104 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 PANTHER PTHR24960:SF43 412 545 3.3E-104 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1510 97aafb463f47f2406825a18f865ed0e6 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1510 97aafb463f47f2406825a18f865ed0e6 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1510 97aafb463f47f2406825a18f865ed0e6 553 Gene3D G3DSA:3.30.70.20 224 238 1.8E-20 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 Gene3D G3DSA:3.30.70.20 417 484 1.8E-20 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 Gene3D G3DSA:3.30.70.20 170 223 2.0E-13 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 PANTHER PTHR24960 88 244 3.3E-104 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 PANTHER PTHR24960 412 545 3.3E-104 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 SUPERFAMILY SSF54862 411 504 4.42E-38 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 SUPERFAMILY SSF54862 143 238 4.42E-38 T 22-04-2016 VP1510 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1510 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 SUPERFAMILY SSF56300 411 538 3.98E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 SUPERFAMILY SSF56300 152 193 3.98E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 SUPERFAMILY SSF56300 321 340 3.98E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 Gene3D G3DSA:3.60.21.10 413 442 9.8E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 Gene3D G3DSA:3.60.21.10 291 363 9.8E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 Gene3D G3DSA:3.60.21.10 137 175 9.8E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 PANTHER PTHR37031 130 234 1.6E-95 T 22-04-2016 VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 PANTHER PTHR37031 317 611 1.6E-95 T 22-04-2016 VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 PANTHER PTHR37031:SF2 130 234 1.6E-95 T 22-04-2016 VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 Pfam PF09423 PhoD-like phosphatase 318 586 1.0E-6 T 22-04-2016 IPR018946 Alkaline phosphatase D-related VP1444 63fdfc616bd226a6ca71b9d0dd360c3b 649 PANTHER PTHR37031:SF2 317 611 1.6E-95 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 PANTHER PTHR23155 28 244 5.9E-61 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00220 205 410 9.3E-6 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VP1985 5f9eadb7166ea9af480e8344cb017402 414 Gene3D G3DSA:3.80.10.10 5 204 1.7E-36 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like VP1985 5f9eadb7166ea9af480e8344cb017402 414 SUPERFAMILY SSF56112 197 369 3.55E-25 T 22-04-2016 IPR011009 Protein kinase-like domain VP1985 5f9eadb7166ea9af480e8344cb017402 414 Pfam PF00069 Protein kinase domain 205 366 2.0E-16 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00364 128 147 160.0 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00364 151 170 200.0 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00364 105 124 11.0 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00364 37 56 90.0 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00364 60 79 2.5 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 211 238 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 VP1985 5f9eadb7166ea9af480e8344cb017402 414 Gene3D G3DSA:3.30.200.20 205 273 9.2E-11 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00369 104 128 52.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00369 151 174 11.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00369 129 150 120.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00369 39 59 32.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VP1985 5f9eadb7166ea9af480e8344cb017402 414 SMART SM00369 60 83 8.7 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VP1985 5f9eadb7166ea9af480e8344cb017402 414 PANTHER PTHR23155:SF644 28 244 5.9E-61 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 Gene3D G3DSA:1.10.510.10 274 366 6.3E-13 T 22-04-2016 VP1985 5f9eadb7166ea9af480e8344cb017402 414 Pfam PF13855 Leucine rich repeat 106 164 2.3E-8 T 22-04-2016 IPR001611 Leucine-rich repeat GO:0005515 VP1985 5f9eadb7166ea9af480e8344cb017402 414 SUPERFAMILY SSF52075 39 208 1.57E-34 T 22-04-2016 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 SUPERFAMILY SSF56322 11 453 3.66E-143 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 Pfam PF00425 chorismate binding enzyme 191 444 4.5E-98 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 154 1.0E-28 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 2.5E-121 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 Gene3D G3DSA:3.60.120.10 19 453 4.3E-154 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VP1875 ffc8b8a8eed7c45f8d79ee7ce628030d 454 PANTHER PTHR11236 28 453 4.5E-162 T 22-04-2016 VP1112 f86932fc69707ffb754049bd8156faf9 426 Gene3D G3DSA:3.90.1150.10 3 58 2.5E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1112 f86932fc69707ffb754049bd8156faf9 426 Gene3D G3DSA:3.90.1150.10 329 420 2.5E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1112 f86932fc69707ffb754049bd8156faf9 426 PIRSF PIRSF000521 20 421 1.4E-36 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1112 f86932fc69707ffb754049bd8156faf9 426 PANTHER PTHR11986 2 426 9.1E-203 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1112 f86932fc69707ffb754049bd8156faf9 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1112 f86932fc69707ffb754049bd8156faf9 426 Pfam PF00202 Aminotransferase class-III 24 418 1.5E-129 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1112 f86932fc69707ffb754049bd8156faf9 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 49.133 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VP1112 f86932fc69707ffb754049bd8156faf9 426 Gene3D G3DSA:3.40.640.10 59 326 7.3E-93 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1112 f86932fc69707ffb754049bd8156faf9 426 PANTHER PTHR11986:SF8 2 426 9.1E-203 T 22-04-2016 VP1112 f86932fc69707ffb754049bd8156faf9 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 3.9E-179 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VP1112 f86932fc69707ffb754049bd8156faf9 426 SUPERFAMILY SSF53383 4 420 9.43E-137 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1766 213624bca4e477e43095954876bddddd 213 SMART SM00863 166 208 5.3E-7 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VP1766 213624bca4e477e43095954876bddddd 213 Pfam PF01411 tRNA synthetases class II (A) 11 87 4.2E-10 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VP1766 213624bca4e477e43095954876bddddd 213 PANTHER PTHR11777 6 208 2.5E-33 T 22-04-2016 VP1766 213624bca4e477e43095954876bddddd 213 SUPERFAMILY SSF55186 84 210 1.44E-26 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VP1766 213624bca4e477e43095954876bddddd 213 SUPERFAMILY SSF50447 1 83 2.15E-16 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP1766 213624bca4e477e43095954876bddddd 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 5.1E-6 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VP0126 0f9f086e900e8a478c24c00ea8df586d 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 2.2E-49 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VP0126 0f9f086e900e8a478c24c00ea8df586d 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.545 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VP0126 0f9f086e900e8a478c24c00ea8df586d 144 PANTHER PTHR10472 2 143 4.1E-65 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VP0126 0f9f086e900e8a478c24c00ea8df586d 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 3.4E-63 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VP0126 0f9f086e900e8a478c24c00ea8df586d 144 Gene3D G3DSA:3.50.80.10 3 143 1.2E-51 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VP0126 0f9f086e900e8a478c24c00ea8df586d 144 SUPERFAMILY SSF69500 2 143 3.27E-53 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VP2078 59c50e168efa7ab46a7f06d66717206f 264 Pfam PF00005 ABC transporter 22 177 5.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2078 59c50e168efa7ab46a7f06d66717206f 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2078 59c50e168efa7ab46a7f06d66717206f 264 PANTHER PTHR24220:SF534 3 251 8.3E-131 T 22-04-2016 VP2078 59c50e168efa7ab46a7f06d66717206f 264 PANTHER PTHR24220 3 251 8.3E-131 T 22-04-2016 VP2078 59c50e168efa7ab46a7f06d66717206f 264 SUPERFAMILY SSF52540 2 231 3.62E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2078 59c50e168efa7ab46a7f06d66717206f 264 Gene3D G3DSA:3.40.50.300 1 231 9.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2078 59c50e168efa7ab46a7f06d66717206f 264 SMART SM00382 31 226 8.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2657 bc48cebb66062b31e65e1383449dbe2f 241 SUPERFAMILY SSF69593 4 235 7.32E-57 T 22-04-2016 VP2657 bc48cebb66062b31e65e1383449dbe2f 241 Gene3D G3DSA:3.40.1130.10 44 210 1.9E-17 T 22-04-2016 VP2657 bc48cebb66062b31e65e1383449dbe2f 241 PANTHER PTHR10434:SF20 1 241 1.8E-153 T 22-04-2016 VP2657 bc48cebb66062b31e65e1383449dbe2f 241 SMART SM00563 67 182 6.6E-40 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP2657 bc48cebb66062b31e65e1383449dbe2f 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.4E-44 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 VP2657 bc48cebb66062b31e65e1383449dbe2f 241 PANTHER PTHR10434 1 241 1.8E-153 T 22-04-2016 VP2657 bc48cebb66062b31e65e1383449dbe2f 241 Pfam PF01553 Acyltransferase 58 180 6.5E-32 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 PANTHER PTHR30085 259 401 4.4E-165 T 22-04-2016 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 PANTHER PTHR30085 1 180 4.4E-165 T 22-04-2016 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 SUPERFAMILY SSF161098 91 159 1.06E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 SUPERFAMILY SSF161098 264 382 1.06E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 1.4E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 242 396 2.4E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 PANTHER PTHR30085:SF1 259 401 4.4E-165 T 22-04-2016 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 PANTHER PTHR30085:SF1 1 180 4.4E-165 T 22-04-2016 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 Gene3D G3DSA:1.10.3720.10 267 396 2.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 Gene3D G3DSA:1.10.3720.10 90 159 2.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1621 71c05bbec9ae7b834ee4c4d6a87021b0 401 Gene3D G3DSA:1.10.3720.10 205 206 2.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0429 b4c8f67990dca05a632bbadc717ee534 194 Gene3D G3DSA:3.40.50.1820 4 188 6.2E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0429 b4c8f67990dca05a632bbadc717ee534 194 SUPERFAMILY SSF53474 5 192 7.9E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0429 b4c8f67990dca05a632bbadc717ee534 194 PANTHER PTHR35602 1 194 1.3E-108 T 22-04-2016 VP0429 b4c8f67990dca05a632bbadc717ee534 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 3.0E-70 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VP0429 b4c8f67990dca05a632bbadc717ee534 194 PANTHER PTHR35602:SF3 1 194 1.3E-108 T 22-04-2016 VP0869 d39d986b0aae81ff3bc0db4f698ff637 284 Gene3D G3DSA:3.40.50.1820 2 281 3.6E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0869 d39d986b0aae81ff3bc0db4f698ff637 284 Pfam PF00561 alpha/beta hydrolase fold 27 255 2.3E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0869 d39d986b0aae81ff3bc0db4f698ff637 284 PANTHER PTHR10992 1 283 1.6E-35 T 22-04-2016 VP0869 d39d986b0aae81ff3bc0db4f698ff637 284 SUPERFAMILY SSF53474 2 282 8.98E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0869 d39d986b0aae81ff3bc0db4f698ff637 284 PANTHER PTHR10992:SF699 1 283 1.6E-35 T 22-04-2016 VP2198 ad074658f3fcfd2e81690e849c769126 87 Pfam PF08891 YfcL protein 4 84 1.9E-32 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL VP0247 8192b81505dd738e7264472a801d9a90 170 PANTHER PTHR33254 1 162 5.4E-106 T 22-04-2016 VP0247 8192b81505dd738e7264472a801d9a90 170 Pfam PF03737 Demethylmenaquinone methyltransferase 6 152 2.1E-39 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VP0247 8192b81505dd738e7264472a801d9a90 170 PANTHER PTHR33254:SF7 1 162 5.4E-106 T 22-04-2016 VP0247 8192b81505dd738e7264472a801d9a90 170 Gene3D G3DSA:3.50.30.40 1 158 4.0E-49 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VP0247 8192b81505dd738e7264472a801d9a90 170 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 9.3E-83 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VP0247 8192b81505dd738e7264472a801d9a90 170 SUPERFAMILY SSF89562 2 158 2.75E-47 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VP0247 8192b81505dd738e7264472a801d9a90 170 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.793 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VP0247 8192b81505dd738e7264472a801d9a90 170 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.5E-68 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VP0522 ab6afa3288c68b3f768509d6de9af831 263 PANTHER PTHR30269 1 263 7.4E-116 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP0522 ab6afa3288c68b3f768509d6de9af831 263 PANTHER PTHR30269:SF18 1 263 7.4E-116 T 22-04-2016 VP0522 ab6afa3288c68b3f768509d6de9af831 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 9.8E-51 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 PANTHER PTHR11451 7 247 7.4E-243 T 22-04-2016 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 PANTHER PTHR11451 267 552 7.4E-243 T 22-04-2016 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Gene3D G3DSA:2.40.240.10 463 548 1.7E-34 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 SUPERFAMILY SSF50715 340 548 3.03E-80 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 SUPERFAMILY SSF52374 11 337 4.5E-104 T 22-04-2016 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Gene3D G3DSA:1.10.1160.10 263 338 6.0E-39 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 4.8E-298 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Gene3D G3DSA:3.90.800.10 101 209 3.3E-48 T 22-04-2016 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Gene3D G3DSA:2.40.240.10 348 462 6.0E-51 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 1.0E-63 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.281 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 PANTHER PTHR11451:SF29 7 247 7.4E-243 T 22-04-2016 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 PANTHER PTHR11451:SF29 267 552 7.4E-243 T 22-04-2016 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.0E-127 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Gene3D G3DSA:3.40.50.620 28 96 9.7E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0832 3cc779f9d2c9eb2884c4ac24a5487d5b 556 Gene3D G3DSA:3.40.50.620 212 262 9.7E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1115 4d2c86a04c3a7eeb43f9ca89be5901cf 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 32.528 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VP1115 4d2c86a04c3a7eeb43f9ca89be5901cf 268 Gene3D G3DSA:3.40.50.150 40 265 2.1E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1115 4d2c86a04c3a7eeb43f9ca89be5901cf 268 PANTHER PTHR10108 23 191 5.1E-41 T 22-04-2016 VP1115 4d2c86a04c3a7eeb43f9ca89be5901cf 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 266 1.8E-67 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VP1115 4d2c86a04c3a7eeb43f9ca89be5901cf 268 SUPERFAMILY SSF53335 20 207 4.26E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1115 4d2c86a04c3a7eeb43f9ca89be5901cf 268 Pfam PF08241 Methyltransferase domain 58 148 1.5E-25 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VP1115 4d2c86a04c3a7eeb43f9ca89be5901cf 268 PANTHER PTHR10108:SF855 23 191 5.1E-41 T 22-04-2016 VP0983 cf7347a5a948d0a08f519401cdf14b43 335 PANTHER PTHR30160 3 326 7.2E-99 T 22-04-2016 VP0983 cf7347a5a948d0a08f519401cdf14b43 335 Gene3D G3DSA:3.40.50.300 158 169 2.5E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0983 cf7347a5a948d0a08f519401cdf14b43 335 Gene3D G3DSA:3.40.50.300 48 123 2.5E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0983 cf7347a5a948d0a08f519401cdf14b43 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 4.8E-95 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VP0983 cf7347a5a948d0a08f519401cdf14b43 335 PANTHER PTHR30160:SF13 3 326 7.2E-99 T 22-04-2016 VP0983 cf7347a5a948d0a08f519401cdf14b43 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.013 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VP0983 cf7347a5a948d0a08f519401cdf14b43 335 SUPERFAMILY SSF52540 50 163 1.26E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0983 cf7347a5a948d0a08f519401cdf14b43 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 3.4E-111 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.286 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.1E-28 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.270.10 1060 1241 2.8E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.270.10 793 820 2.8E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1110.10 346 444 2.6E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1110.10 153 230 2.6E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 7.9E-17 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 1.8E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.50.100 715 792 3.0E-30 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856:SF20 1181 1342 0.0 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 445 591 2.4E-145 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 659 713 2.4E-145 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 20 151 2.4E-145 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.50.150 1045 1059 1.6E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.50.150 828 937 1.6E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856 1181 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856 1034 1128 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856 340 725 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 PANTHER PTHR20856 743 930 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.30.150.10 592 656 4.5E-27 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.0E-22 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.0E-156 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 SUPERFAMILY SSF64484 343 939 0.0 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 SUPERFAMILY SSF64484 11 226 0.0 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 22-04-2016 VP2922 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 2.9E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VP2662 c5b82f9d6e5fbd92b77d387134ee0b2b 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.2E-54 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VP2662 c5b82f9d6e5fbd92b77d387134ee0b2b 162 Pfam PF02470 MlaD protein 39 118 7.9E-20 T 22-04-2016 IPR003399 Mce/MlaD VP2662 c5b82f9d6e5fbd92b77d387134ee0b2b 162 PANTHER PTHR33371 1 157 1.9E-43 T 22-04-2016 VP1595 1b9cf08953838f9d598610b665a1b8c4 639 SMART SM00382 28 230 6.3E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1595 1b9cf08953838f9d598610b665a1b8c4 639 SMART SM00382 344 514 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1595 1b9cf08953838f9d598610b665a1b8c4 639 Gene3D G3DSA:3.40.50.300 2 271 1.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1595 1b9cf08953838f9d598610b665a1b8c4 639 Pfam PF16326 ABC transporter C-terminal domain 565 634 6.1E-22 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VP1595 1b9cf08953838f9d598610b665a1b8c4 639 Gene3D G3DSA:3.40.50.300 321 561 7.7E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1595 1b9cf08953838f9d598610b665a1b8c4 639 SUPERFAMILY SSF52540 310 518 9.77E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1595 1b9cf08953838f9d598610b665a1b8c4 639 Pfam PF12848 ABC transporter 224 297 7.5E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain VP1595 1b9cf08953838f9d598610b665a1b8c4 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1595 1b9cf08953838f9d598610b665a1b8c4 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1595 1b9cf08953838f9d598610b665a1b8c4 639 SUPERFAMILY SSF52540 126 236 1.66E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1595 1b9cf08953838f9d598610b665a1b8c4 639 SUPERFAMILY SSF52540 3 94 1.66E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1595 1b9cf08953838f9d598610b665a1b8c4 639 PANTHER PTHR19211:SF45 1 575 3.8E-245 T 22-04-2016 VP1595 1b9cf08953838f9d598610b665a1b8c4 639 Pfam PF00005 ABC transporter 336 469 1.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1595 1b9cf08953838f9d598610b665a1b8c4 639 Pfam PF00005 ABC transporter 19 185 2.4E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1595 1b9cf08953838f9d598610b665a1b8c4 639 PANTHER PTHR19211 1 575 3.8E-245 T 22-04-2016 VP2001 8e1b8aa0c0a80195d5dfbd415fe9be12 163 Pfam PF00583 Acetyltransferase (GNAT) family 73 144 1.0E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2001 8e1b8aa0c0a80195d5dfbd415fe9be12 163 Gene3D G3DSA:3.40.630.30 23 151 4.2E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2001 8e1b8aa0c0a80195d5dfbd415fe9be12 163 PANTHER PTHR13355 56 144 2.2E-19 T 22-04-2016 VP2001 8e1b8aa0c0a80195d5dfbd415fe9be12 163 SUPERFAMILY SSF55729 35 153 1.83E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2001 8e1b8aa0c0a80195d5dfbd415fe9be12 163 PANTHER PTHR13355:SF5 56 144 2.2E-19 T 22-04-2016 VP1960 0415ab0926ef7579cc2460d9034e30ad 396 PANTHER PTHR10314 6 393 4.2E-226 T 22-04-2016 VP1960 0415ab0926ef7579cc2460d9034e30ad 396 Gene3D G3DSA:3.40.50.1100 96 175 2.8E-22 T 22-04-2016 VP1960 0415ab0926ef7579cc2460d9034e30ad 396 Gene3D G3DSA:3.40.50.1100 176 393 1.0E-94 T 22-04-2016 VP1960 0415ab0926ef7579cc2460d9034e30ad 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 50.009 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP1960 0415ab0926ef7579cc2460d9034e30ad 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 8.4E-51 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP1960 0415ab0926ef7579cc2460d9034e30ad 396 SUPERFAMILY SSF53686 5 387 2.62E-142 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP1960 0415ab0926ef7579cc2460d9034e30ad 396 PANTHER PTHR10314:SF3 6 393 4.2E-226 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP1960 0415ab0926ef7579cc2460d9034e30ad 396 PIRSF PIRSF001413 1 395 1.3E-168 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP1960 0415ab0926ef7579cc2460d9034e30ad 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP1960 0415ab0926ef7579cc2460d9034e30ad 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 4.0E-195 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP2430 a38799109427b714e0b19e06a834a519 782 SUPERFAMILY SSF141371 466 554 9.42E-7 T 22-04-2016 VP2430 a38799109427b714e0b19e06a834a519 782 Pfam PF07238 PilZ domain 145 229 4.8E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VP2430 a38799109427b714e0b19e06a834a519 782 Pfam PF07238 PilZ domain 470 560 3.7E-14 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VP2430 a38799109427b714e0b19e06a834a519 782 Gene3D G3DSA:2.40.10.220 468 524 2.7E-4 T 22-04-2016 VP0487 efc4b851d76e96d641f943866a535083 783 SUPERFAMILY SSF55785 140 267 3.14E-25 T 22-04-2016 IPR000014 PAS domain VP0487 efc4b851d76e96d641f943866a535083 783 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0487 efc4b851d76e96d641f943866a535083 783 SUPERFAMILY SSF47384 270 347 2.94E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0487 efc4b851d76e96d641f943866a535083 783 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 1.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0487 efc4b851d76e96d641f943866a535083 783 SMART SM00073 673 779 5.7E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP0487 efc4b851d76e96d641f943866a535083 783 SMART SM00387 394 510 1.3E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0487 efc4b851d76e96d641f943866a535083 783 Gene3D G3DSA:3.30.450.20 142 267 2.1E-23 T 22-04-2016 VP0487 efc4b851d76e96d641f943866a535083 783 Pfam PF00072 Response regulator receiver domain 529 638 2.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0487 efc4b851d76e96d641f943866a535083 783 Gene3D G3DSA:1.10.287.130 274 343 9.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0487 efc4b851d76e96d641f943866a535083 783 Pfam PF08448 PAS fold 162 271 6.7E-19 T 22-04-2016 IPR013656 PAS fold-4 VP0487 efc4b851d76e96d641f943866a535083 783 SMART SM00388 282 347 2.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0487 efc4b851d76e96d641f943866a535083 783 PANTHER PTHR24423:SF476 153 684 0.0 T 22-04-2016 VP0487 efc4b851d76e96d641f943866a535083 783 PANTHER PTHR24423:SF476 20 95 0.0 T 22-04-2016 VP0487 efc4b851d76e96d641f943866a535083 783 SUPERFAMILY SSF55874 336 506 3.54E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0487 efc4b851d76e96d641f943866a535083 783 PANTHER PTHR24423 153 684 0.0 T 22-04-2016 VP0487 efc4b851d76e96d641f943866a535083 783 PANTHER PTHR24423 20 95 0.0 T 22-04-2016 VP0487 efc4b851d76e96d641f943866a535083 783 Gene3D G3DSA:1.10.287.970 1 89 3.1E-39 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain VP0487 efc4b851d76e96d641f943866a535083 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 9.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0487 efc4b851d76e96d641f943866a535083 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 9.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0487 efc4b851d76e96d641f943866a535083 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 9.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0487 efc4b851d76e96d641f943866a535083 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 9.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0487 efc4b851d76e96d641f943866a535083 783 Pfam PF01627 Hpt domain 694 765 6.3E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP0487 efc4b851d76e96d641f943866a535083 783 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 6.5E-18 T 22-04-2016 IPR000014 PAS domain VP0487 efc4b851d76e96d641f943866a535083 783 SMART SM00091 155 221 9.2E-8 T 22-04-2016 IPR000014 PAS domain VP0487 efc4b851d76e96d641f943866a535083 783 SMART SM00448 527 638 2.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0487 efc4b851d76e96d641f943866a535083 783 Gene3D G3DSA:3.40.50.2300 522 642 1.7E-28 T 22-04-2016 VP0487 efc4b851d76e96d641f943866a535083 783 SUPERFAMILY SSF52172 527 642 2.7E-25 T 22-04-2016 IPR011006 CheY-like superfamily VP0487 efc4b851d76e96d641f943866a535083 783 Gene3D G3DSA:1.20.120.160 683 781 2.0E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP0487 efc4b851d76e96d641f943866a535083 783 SUPERFAMILY SSF47226 667 781 2.88E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP0487 efc4b851d76e96d641f943866a535083 783 Gene3D G3DSA:3.30.565.10 355 506 1.0E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0487 efc4b851d76e96d641f943866a535083 783 PIRSF PIRSF003182 1 783 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VP1935 622d772e43aee1868daa373e7fd627dc 377 PANTHER PTHR23409 197 377 1.9E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VP1935 622d772e43aee1868daa373e7fd627dc 377 PANTHER PTHR23409 1 173 1.9E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VP1935 622d772e43aee1868daa373e7fd627dc 377 PANTHER PTHR23409:SF23 197 377 1.9E-270 T 22-04-2016 VP1935 622d772e43aee1868daa373e7fd627dc 377 PANTHER PTHR23409:SF23 1 173 1.9E-270 T 22-04-2016 VP1935 622d772e43aee1868daa373e7fd627dc 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 2.2E-49 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VP1935 622d772e43aee1868daa373e7fd627dc 377 SUPERFAMILY SSF47240 3 341 9.98E-112 T 22-04-2016 IPR009078 Ferritin-like superfamily VP1935 622d772e43aee1868daa373e7fd627dc 377 Gene3D G3DSA:1.10.620.20 3 341 1.7E-123 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 VP1935 622d772e43aee1868daa373e7fd627dc 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VP1193 c3ba3bf6480c775caf14a3425860ae87 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 1.7E-8 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VP1193 c3ba3bf6480c775caf14a3425860ae87 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VP0099 c63119e8188ac00bb810994644a5c8f9 132 Gene3D G3DSA:1.10.287.880 40 71 8.9E-4 T 22-04-2016 VP0099 c63119e8188ac00bb810994644a5c8f9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.6E-27 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VP0099 c63119e8188ac00bb810994644a5c8f9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.6E-27 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VP0099 c63119e8188ac00bb810994644a5c8f9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 6.6E-27 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VP0099 c63119e8188ac00bb810994644a5c8f9 132 PANTHER PTHR33162:SF4 2 121 9.0E-48 T 22-04-2016 VP0099 c63119e8188ac00bb810994644a5c8f9 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.7E-32 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VP0099 c63119e8188ac00bb810994644a5c8f9 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 18.182 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VP0099 c63119e8188ac00bb810994644a5c8f9 132 PANTHER PTHR33162 2 121 9.0E-48 T 22-04-2016 VP0099 c63119e8188ac00bb810994644a5c8f9 132 Pfam PF02416 mttA/Hcf106 family 4 49 2.3E-5 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VP2865 706aebada076399a2f4c5c5fad78cfca 613 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 222 422 5.0E-18 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VP2865 706aebada076399a2f4c5c5fad78cfca 613 Gene3D G3DSA:3.40.30.10 501 612 3.9E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2865 706aebada076399a2f4c5c5fad78cfca 613 SUPERFAMILY SSF52833 508 611 7.94E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2865 706aebada076399a2f4c5c5fad78cfca 613 Pfam PF13899 Thioredoxin-like 503 584 1.3E-13 T 22-04-2016 VP2865 706aebada076399a2f4c5c5fad78cfca 613 PANTHER PTHR32234 12 152 5.2E-225 T 22-04-2016 VP2865 706aebada076399a2f4c5c5fad78cfca 613 PANTHER PTHR32234 185 612 5.2E-225 T 22-04-2016 VP2865 706aebada076399a2f4c5c5fad78cfca 613 PANTHER PTHR32234:SF0 12 152 5.2E-225 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VP2865 706aebada076399a2f4c5c5fad78cfca 613 PANTHER PTHR32234:SF0 185 612 5.2E-225 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VP2865 706aebada076399a2f4c5c5fad78cfca 613 SUPERFAMILY SSF74863 39 153 3.4E-40 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VP2865 706aebada076399a2f4c5c5fad78cfca 613 Gene3D G3DSA:2.60.40.1250 36 154 1.9E-41 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VP2865 706aebada076399a2f4c5c5fad78cfca 613 Pfam PF11412 Disulphide bond corrector protein DsbC 41 151 7.2E-29 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VP2865 706aebada076399a2f4c5c5fad78cfca 613 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 613 38.558 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VP2865 706aebada076399a2f4c5c5fad78cfca 613 ProSitePatterns PS00194 Thioredoxin family active site. 522 540 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VP2711 81e3f33023d4c7bec2e5878c2c798bad 290 PANTHER PTHR22572 4 278 6.9E-101 T 22-04-2016 VP2711 81e3f33023d4c7bec2e5878c2c798bad 290 PANTHER PTHR22572:SF14 4 278 6.9E-101 T 22-04-2016 VP2711 81e3f33023d4c7bec2e5878c2c798bad 290 Pfam PF00483 Nucleotidyl transferase 9 265 7.1E-32 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VP2711 81e3f33023d4c7bec2e5878c2c798bad 290 SUPERFAMILY SSF53448 2 271 2.5E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP2711 81e3f33023d4c7bec2e5878c2c798bad 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.5E-125 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VP2711 81e3f33023d4c7bec2e5878c2c798bad 290 Gene3D G3DSA:3.90.550.10 3 268 1.8E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP2833 11b06b9a978d7d86af332cf61ca98735 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VP2833 11b06b9a978d7d86af332cf61ca98735 273 Gene3D G3DSA:1.10.3130.10 7 142 2.5E-46 T 22-04-2016 VP2833 11b06b9a978d7d86af332cf61ca98735 273 SUPERFAMILY SSF51161 8 258 1.74E-63 T 22-04-2016 IPR011004 Trimeric LpxA-like VP2833 11b06b9a978d7d86af332cf61ca98735 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.1E-74 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VP2833 11b06b9a978d7d86af332cf61ca98735 273 SMART SM00971 9 113 6.0E-59 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VP2833 11b06b9a978d7d86af332cf61ca98735 273 Gene3D G3DSA:2.160.10.10 143 250 9.9E-32 T 22-04-2016 VP2833 11b06b9a978d7d86af332cf61ca98735 273 PANTHER PTHR23416:SF2 5 268 2.1E-150 T 22-04-2016 VP2833 11b06b9a978d7d86af332cf61ca98735 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 4.0E-37 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VP2833 11b06b9a978d7d86af332cf61ca98735 273 PANTHER PTHR23416 5 268 2.1E-150 T 22-04-2016 VP2833 11b06b9a978d7d86af332cf61ca98735 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.5E-9 T 22-04-2016 IPR001451 Hexapeptide repeat VP2027 08b7e6378096d94bfb2cf2293988a046 391 Gene3D G3DSA:1.25.40.10 110 233 9.7E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2027 08b7e6378096d94bfb2cf2293988a046 391 Gene3D G3DSA:1.25.40.10 42 95 8.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2027 08b7e6378096d94bfb2cf2293988a046 391 Gene3D G3DSA:1.25.40.10 234 332 4.5E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2027 08b7e6378096d94bfb2cf2293988a046 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 36.806 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VP2027 08b7e6378096d94bfb2cf2293988a046 391 PANTHER PTHR23083 8 324 6.8E-37 T 22-04-2016 VP2027 08b7e6378096d94bfb2cf2293988a046 391 SMART SM00028 35 68 270.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2027 08b7e6378096d94bfb2cf2293988a046 391 SMART SM00028 216 249 4.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2027 08b7e6378096d94bfb2cf2293988a046 391 SMART SM00028 182 215 0.13 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2027 08b7e6378096d94bfb2cf2293988a046 391 SMART SM00028 69 102 81.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2027 08b7e6378096d94bfb2cf2293988a046 391 SUPERFAMILY SSF81901 39 269 1.54E-21 T 22-04-2016 VP2027 08b7e6378096d94bfb2cf2293988a046 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.027 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2027 08b7e6378096d94bfb2cf2293988a046 391 Pfam PF14559 Tetratricopeptide repeat 194 248 4.8E-6 T 22-04-2016 VP2809 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 2.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 2.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 2.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 2.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 1.9E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.9E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.9E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.9E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PANTHER PTHR22924:SF49 1 390 2.8E-123 T 22-04-2016 VP2809 82c16033f2d64af622e62cc178e86825 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 3.9E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VP2809 82c16033f2d64af622e62cc178e86825 394 SUPERFAMILY SSF52343 255 393 1.14E-37 T 22-04-2016 VP2809 82c16033f2d64af622e62cc178e86825 394 Gene3D G3DSA:1.10.490.10 2 140 2.9E-54 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VP2809 82c16033f2d64af622e62cc178e86825 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 1.0E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 SUPERFAMILY SSF63380 148 253 4.89E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP2809 82c16033f2d64af622e62cc178e86825 394 PANTHER PTHR22924 1 390 2.8E-123 T 22-04-2016 VP2809 82c16033f2d64af622e62cc178e86825 394 Pfam PF00042 Globin 7 102 1.4E-14 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 VP2809 82c16033f2d64af622e62cc178e86825 394 Gene3D G3DSA:2.40.30.10 149 254 5.0E-34 T 22-04-2016 VP2809 82c16033f2d64af622e62cc178e86825 394 SUPERFAMILY SSF46458 1 142 1.33E-36 T 22-04-2016 IPR009050 Globin-like VP2809 82c16033f2d64af622e62cc178e86825 394 Gene3D G3DSA:3.40.50.80 257 393 4.0E-37 T 22-04-2016 VP2809 82c16033f2d64af622e62cc178e86825 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.739 T 22-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 VP1447 8b4044a30110b5e716782785a03e216e 815 Gene3D G3DSA:3.40.50.740 406 649 3.7E-76 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 Gene3D G3DSA:3.40.50.740 115 200 3.7E-76 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 9 808 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 VP1447 8b4044a30110b5e716782785a03e216e 815 PANTHER PTHR11615:SF128 346 806 0.0 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 PANTHER PTHR11615:SF128 1 314 0.0 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 Pfam PF00384 Molybdopterin oxidoreductase 113 570 1.7E-98 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VP1447 8b4044a30110b5e716782785a03e216e 815 SMART SM00926 50 110 2.4E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VP1447 8b4044a30110b5e716782785a03e216e 815 Gene3D G3DSA:3.40.228.10 201 405 6.2E-69 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 SUPERFAMILY SSF53706 51 692 3.66E-175 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VP1447 8b4044a30110b5e716782785a03e216e 815 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 VP1447 8b4044a30110b5e716782785a03e216e 815 SUPERFAMILY SSF50692 636 806 6.01E-35 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VP1447 8b4044a30110b5e716782785a03e216e 815 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 110 2.6E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VP1447 8b4044a30110b5e716782785a03e216e 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VP1447 8b4044a30110b5e716782785a03e216e 815 Pfam PF01568 Molydopterin dinucleotide binding domain 690 801 1.9E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VP1447 8b4044a30110b5e716782785a03e216e 815 Gene3D G3DSA:2.20.25.90 49 114 1.3E-17 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 Gene3D G3DSA:2.40.40.20 666 808 3.3E-48 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 PANTHER PTHR11615 346 806 0.0 T 22-04-2016 VP1447 8b4044a30110b5e716782785a03e216e 815 PANTHER PTHR11615 1 314 0.0 T 22-04-2016 VP1925 a226abe8404830832755bc66998a9abe 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 620 4.4E-59 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VP1925 a226abe8404830832755bc66998a9abe 635 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 626 1.1E-171 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PANTHER PTHR30009 1 416 1.2E-170 T 22-04-2016 VP1925 a226abe8404830832755bc66998a9abe 635 PANTHER PTHR30009 456 626 1.2E-170 T 22-04-2016 VP1925 a226abe8404830832755bc66998a9abe 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PANTHER PTHR30009:SF0 1 416 1.2E-170 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 PANTHER PTHR30009:SF0 456 626 1.2E-170 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1925 a226abe8404830832755bc66998a9abe 635 Pfam PF01578 Cytochrome C assembly protein 89 294 1.0E-39 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VP1320 ac062739206986fe202f99bac2353385 238 Gene3D G3DSA:3.90.550.10 2 233 3.9E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1320 ac062739206986fe202f99bac2353385 238 PANTHER PTHR32125:SF4 3 233 2.6E-46 T 22-04-2016 VP1320 ac062739206986fe202f99bac2353385 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VP1320 ac062739206986fe202f99bac2353385 238 PANTHER PTHR32125 3 233 2.6E-46 T 22-04-2016 VP1320 ac062739206986fe202f99bac2353385 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 228 3.0E-43 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VP1320 ac062739206986fe202f99bac2353385 238 SUPERFAMILY SSF53448 2 228 2.38E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1320 ac062739206986fe202f99bac2353385 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 231 26.298 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 PANTHER PTHR23135 22 472 9.8E-230 T 22-04-2016 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 422 2.7E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 SUPERFAMILY SSF53244 331 479 8.97E-49 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 SUPERFAMILY SSF51984 28 114 6.15E-29 T 22-04-2016 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 Gene3D G3DSA:3.90.190.20 334 480 1.8E-58 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 Gene3D G3DSA:3.40.1190.10 116 333 3.0E-83 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 27 484 43.814 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 SUPERFAMILY SSF53623 113 327 1.01E-72 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 Gene3D G3DSA:3.40.50.720 30 115 8.3E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 30 478 5.5E-188 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 Pfam PF01225 Mur ligase family, catalytic domain 30 126 4.1E-28 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 Pfam PF08245 Mur ligase middle domain 132 312 2.0E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0461 ae9f45668ca66bf4a938603b928f5dc5 490 PANTHER PTHR23135:SF5 22 472 9.8E-230 T 22-04-2016 VP1257 9444ac178e83e3a2386e34738980e55f 244 Pfam PF02698 DUF218 domain 61 200 9.4E-22 T 22-04-2016 IPR003848 Domain of unknown function DUF218 VP1257 9444ac178e83e3a2386e34738980e55f 244 Gene3D G3DSA:3.40.50.620 54 181 1.4E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1257 9444ac178e83e3a2386e34738980e55f 244 PANTHER PTHR30336 16 220 2.7E-87 T 22-04-2016 VP1257 9444ac178e83e3a2386e34738980e55f 244 PANTHER PTHR30336:SF0 16 220 2.7E-87 T 22-04-2016 VP1763 ef99dc59543a6e787abd65a46563a913 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 3.2E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1763 ef99dc59543a6e787abd65a46563a913 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 3.2E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1763 ef99dc59543a6e787abd65a46563a913 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 3.2E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1763 ef99dc59543a6e787abd65a46563a913 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 3.2E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1763 ef99dc59543a6e787abd65a46563a913 160 SMART SM00347 42 145 1.0E-28 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1763 ef99dc59543a6e787abd65a46563a913 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site VP1763 ef99dc59543a6e787abd65a46563a913 160 PANTHER PTHR33164 2 160 2.5E-37 T 22-04-2016 VP1763 ef99dc59543a6e787abd65a46563a913 160 Gene3D G3DSA:1.10.10.10 8 156 5.2E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1763 ef99dc59543a6e787abd65a46563a913 160 SUPERFAMILY SSF46785 10 156 1.57E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1763 ef99dc59543a6e787abd65a46563a913 160 Pfam PF01047 MarR family 50 110 1.1E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1763 ef99dc59543a6e787abd65a46563a913 160 PANTHER PTHR33164:SF4 2 160 2.5E-37 T 22-04-2016 VP1059 0ff036b21e873a6b1aa238d11a055d34 356 Pfam PF06519 TolA C-terminal 254 352 4.4E-35 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 VP1059 0ff036b21e873a6b1aa238d11a055d34 356 TIGRFAM TIGR02794 tolA_full: protein TolA 13 353 8.9E-93 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 VP1059 0ff036b21e873a6b1aa238d11a055d34 356 SUPERFAMILY SSF74653 264 355 2.75E-15 T 22-04-2016 VP1059 0ff036b21e873a6b1aa238d11a055d34 356 Gene3D G3DSA:3.30.1150.10 253 355 2.3E-21 T 22-04-2016 VP3022 3dea5579c2de1673c322a987ced3adfe 375 Pfam PF04055 Radical SAM superfamily 81 222 7.0E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP3022 3dea5579c2de1673c322a987ced3adfe 375 Gene3D G3DSA:3.20.20.70 37 366 3.6E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP3022 3dea5579c2de1673c322a987ced3adfe 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 362 3.2E-26 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VP3022 3dea5579c2de1673c322a987ced3adfe 375 PANTHER PTHR22976 3 371 1.1E-205 T 22-04-2016 VP3022 3dea5579c2de1673c322a987ced3adfe 375 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 2 371 1.4E-183 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 VP3022 3dea5579c2de1673c322a987ced3adfe 375 PANTHER PTHR22976:SF17 3 371 1.1E-205 T 22-04-2016 VP3022 3dea5579c2de1673c322a987ced3adfe 375 SUPERFAMILY SSF102114 38 366 3.66E-55 T 22-04-2016 VP3022 3dea5579c2de1673c322a987ced3adfe 375 SMART SM00876 256 364 2.0E-35 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VP2022 4737c9116f4e3a856bab7a90724d5868 249 Pfam PF00535 Glycosyl transferase family 2 6 127 1.8E-25 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VP2022 4737c9116f4e3a856bab7a90724d5868 249 PANTHER PTHR10859 3 237 4.4E-66 T 22-04-2016 VP2022 4737c9116f4e3a856bab7a90724d5868 249 Gene3D G3DSA:3.90.550.10 3 177 2.5E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP2022 4737c9116f4e3a856bab7a90724d5868 249 SUPERFAMILY SSF53448 1 232 4.3E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP2022 4737c9116f4e3a856bab7a90724d5868 249 PANTHER PTHR10859:SF49 3 237 4.4E-66 T 22-04-2016 VP2073 b17ebe4f3b80745ef62c67a0bdb16433 178 Pfam PF02600 Disulfide bond formation protein DsbB 16 162 9.8E-43 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VP2073 b17ebe4f3b80745ef62c67a0bdb16433 178 Gene3D G3DSA:1.20.1550.10 5 175 6.5E-64 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain VP2073 b17ebe4f3b80745ef62c67a0bdb16433 178 PANTHER PTHR36570:SF2 1 178 1.5E-82 T 22-04-2016 VP2073 b17ebe4f3b80745ef62c67a0bdb16433 178 SUPERFAMILY SSF158442 17 163 2.88E-44 T 22-04-2016 VP2073 b17ebe4f3b80745ef62c67a0bdb16433 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.618 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB VP2073 b17ebe4f3b80745ef62c67a0bdb16433 178 PANTHER PTHR36570 1 178 1.5E-82 T 22-04-2016 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PIRSF PIRSF036480 1 277 9.4E-112 T 22-04-2016 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 Gene3D G3DSA:3.40.50.170 82 275 7.8E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 Gene3D G3DSA:3.30.70.260 3 70 1.9E-11 T 22-04-2016 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 SUPERFAMILY SSF53328 82 276 1.7E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PANTHER PTHR10520 6 271 1.8E-137 T 22-04-2016 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 Pfam PF01842 ACT domain 5 65 1.2E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.3E-122 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 PANTHER PTHR10520:SF7 6 271 1.8E-137 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 SUPERFAMILY SSF55021 4 55 2.33E-8 T 22-04-2016 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 Pfam PF00551 Formyl transferase 82 259 5.7E-50 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP0864 7de080ca1a016b9fb4c943c6310fb9e1 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.977 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VP2912 46944d3f60bc25eb195344475abe7389 375 PANTHER PTHR22777:SF4 1 334 4.0E-181 T 22-04-2016 VP2912 46944d3f60bc25eb195344475abe7389 375 PANTHER PTHR22777 1 334 4.0E-181 T 22-04-2016 VP2912 46944d3f60bc25eb195344475abe7389 375 Gene3D G3DSA:3.10.580.10 181 317 9.6E-18 T 22-04-2016 VP2912 46944d3f60bc25eb195344475abe7389 375 Pfam PF00571 CBS domain 262 313 7.5E-6 T 22-04-2016 IPR000644 CBS domain VP2912 46944d3f60bc25eb195344475abe7389 375 SUPERFAMILY SSF54631 181 315 1.3E-26 T 22-04-2016 VP2912 46944d3f60bc25eb195344475abe7389 375 Pfam PF01595 Domain of unknown function DUF21 9 177 3.4E-30 T 22-04-2016 IPR002550 Domain of unknown function DUF21 VP2161 f6821fa35ed2a1f9fb6b9ac5b640fb7b 315 PIRSF PIRSF020419 1 299 1.2E-78 T 22-04-2016 IPR016773 Ferric uptake regulator, CjrA, predicted VP2161 f6821fa35ed2a1f9fb6b9ac5b640fb7b 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 55 255 5.4E-61 T 22-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VP2161 f6821fa35ed2a1f9fb6b9ac5b640fb7b 315 PANTHER PTHR31620 35 271 2.2E-15 T 22-04-2016 VP2161 f6821fa35ed2a1f9fb6b9ac5b640fb7b 315 PANTHER PTHR31620:SF8 35 271 2.2E-15 T 22-04-2016 VP2161 f6821fa35ed2a1f9fb6b9ac5b640fb7b 315 SUPERFAMILY SSF159501 32 282 7.85E-75 T 22-04-2016 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 SUPERFAMILY SSF54991 703 800 3.27E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 9.4E-29 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 SUPERFAMILY SSF46955 403 475 1.19E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Pfam PF01588 Putative tRNA binding domain 45 145 8.1E-26 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 SUPERFAMILY SSF56037 196 394 6.8E-78 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Gene3D G3DSA:3.30.56.20 402 475 4.6E-26 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 SUPERFAMILY SSF55681 467 695 6.46E-49 T 22-04-2016 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 PANTHER PTHR10947 2 800 0.0 T 22-04-2016 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 PANTHER PTHR10947:SF0 2 800 0.0 T 22-04-2016 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Gene3D G3DSA:3.30.70.380 709 800 2.3E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 SMART SM00873 212 385 1.7E-100 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 SMART SM00896 707 800 6.4E-45 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 1.4E-276 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 4.3E-18 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 SMART SM00874 403 471 4.8E-29 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 SUPERFAMILY SSF50249 38 196 1.37E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Gene3D G3DSA:3.30.930.10 496 695 4.3E-63 T 22-04-2016 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Gene3D G3DSA:3.50.40.10 198 392 1.4E-86 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Gene3D G3DSA:3.30.56.10 155 184 2.6E-25 T 22-04-2016 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Gene3D G3DSA:3.30.56.10 1 38 2.6E-25 T 22-04-2016 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 46.976 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Gene3D G3DSA:2.40.50.140 42 154 1.5E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1291 18cd4e5d031ad1b7ea22647980c4aeb9 801 Pfam PF03483 B3/4 domain 212 385 1.4E-71 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VP1677 8c30b22a922dca7df086c9a3373da09f 339 PANTHER PTHR17630 35 339 2.3E-88 T 22-04-2016 VP1677 8c30b22a922dca7df086c9a3373da09f 339 Pfam PF01738 Dienelactone hydrolase family 52 169 1.0E-7 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 VP1677 8c30b22a922dca7df086c9a3373da09f 339 SUPERFAMILY SSF53474 33 176 9.67E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1677 8c30b22a922dca7df086c9a3373da09f 339 SUPERFAMILY SSF53474 227 339 9.67E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1677 8c30b22a922dca7df086c9a3373da09f 339 Gene3D G3DSA:3.40.50.1820 38 339 2.1E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1677 8c30b22a922dca7df086c9a3373da09f 339 PANTHER PTHR17630:SF49 35 339 2.3E-88 T 22-04-2016 VP2615 f8f9fdca1fafe81f487e5f1615a7f662 346 PANTHER PTHR30486 1 338 4.3E-195 T 22-04-2016 VP2615 f8f9fdca1fafe81f487e5f1615a7f662 346 SUPERFAMILY SSF52540 5 335 4.29E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2615 f8f9fdca1fafe81f487e5f1615a7f662 346 PANTHER PTHR30486:SF6 1 338 4.3E-195 T 22-04-2016 VP2615 f8f9fdca1fafe81f487e5f1615a7f662 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP2615 f8f9fdca1fafe81f487e5f1615a7f662 346 Pfam PF00437 Type II/IV secretion system protein 12 270 4.0E-47 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP2615 f8f9fdca1fafe81f487e5f1615a7f662 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 6.1E-153 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VP2615 f8f9fdca1fafe81f487e5f1615a7f662 346 Gene3D G3DSA:3.40.50.300 100 338 4.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 Gene3D G3DSA:1.20.1250.20 23 225 6.2E-52 T 22-04-2016 VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 SUPERFAMILY SSF103473 13 451 1.15E-87 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 Pfam PF07690 Major Facilitator Superfamily 34 401 1.2E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 PIRSF PIRSF002808 5 453 6.8E-170 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 PANTHER PTHR11662 1 449 5.4E-240 T 22-04-2016 VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 2.8E-150 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 4.0E-235 T 22-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 Gene3D G3DSA:1.20.1250.20 244 451 1.1E-52 T 22-04-2016 VP2382 a7e053452e580c5f6ac54f5b17fb3960 456 PANTHER PTHR11662:SF141 1 449 5.4E-240 T 22-04-2016 VP2492 53a1b436190fa28f64cfab2b9beb5461 409 SUPERFAMILY SSF111352 12 383 4.58E-105 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VP2492 53a1b436190fa28f64cfab2b9beb5461 409 Gene3D G3DSA:1.10.3430.10 27 398 8.3E-109 T 22-04-2016 IPR029020 Ammonium/urea transporter VP2492 53a1b436190fa28f64cfab2b9beb5461 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 9.8E-205 T 22-04-2016 IPR019879 Ammonium transporter, marine subtype VP2492 53a1b436190fa28f64cfab2b9beb5461 409 Pfam PF00909 Ammonium Transporter Family 18 402 5.9E-101 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VP2492 53a1b436190fa28f64cfab2b9beb5461 409 PANTHER PTHR11730:SF6 2 404 9.9E-144 T 22-04-2016 VP2492 53a1b436190fa28f64cfab2b9beb5461 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VP2492 53a1b436190fa28f64cfab2b9beb5461 409 PANTHER PTHR11730 2 404 9.9E-144 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VP0648 77c2e0d572413d0d961b2d35feb8d023 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 4.5E-17 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VP0648 77c2e0d572413d0d961b2d35feb8d023 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 5.0E-174 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VP0648 77c2e0d572413d0d961b2d35feb8d023 554 Gene3D G3DSA:3.40.50.300 366 385 1.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0648 77c2e0d572413d0d961b2d35feb8d023 554 Gene3D G3DSA:3.40.50.300 431 505 1.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0648 77c2e0d572413d0d961b2d35feb8d023 554 Gene3D G3DSA:3.40.50.300 1 205 2.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0648 77c2e0d572413d0d961b2d35feb8d023 554 PIRSF PIRSF003128 1 554 2.1E-162 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VP0648 77c2e0d572413d0d961b2d35feb8d023 554 SUPERFAMILY SSF52540 1 199 3.36E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0648 77c2e0d572413d0d961b2d35feb8d023 554 SUPERFAMILY SSF52540 287 322 3.36E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0648 77c2e0d572413d0d961b2d35feb8d023 554 SUPERFAMILY SSF52540 351 513 3.36E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0648 77c2e0d572413d0d961b2d35feb8d023 554 PANTHER PTHR11059 2 554 4.9E-182 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VP2205 8d918cd975dcd09c67618b8bda400913 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 1.3E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VP2205 8d918cd975dcd09c67618b8bda400913 154 Gene3D G3DSA:3.40.50.1240 1 152 1.0E-36 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VP2205 8d918cd975dcd09c67618b8bda400913 154 SMART SM00855 2 116 6.1E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VP2205 8d918cd975dcd09c67618b8bda400913 154 SUPERFAMILY SSF53254 1 144 2.78E-21 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VP2205 8d918cd975dcd09c67618b8bda400913 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 1.1E-35 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.911 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.7E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 3.4E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF116878 120 219 1.09E-52 T 22-04-2016 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF116878 378 453 1.09E-52 T 22-04-2016 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 PANTHER PTHR11649 7 453 1.2E-171 T 22-04-2016 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:3.40.50.300 285 375 1.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:3.30.1360.120 2 120 1.2E-42 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.8E-35 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal VP0002 3ad324ec508c391743bcc23fe8371b1e 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 5.1E-101 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:1.20.120.430 246 270 3.1E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:1.20.120.430 121 181 3.1E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:1.20.120.430 383 453 3.1E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 PANTHER PTHR11649:SF56 7 453 1.2E-171 T 22-04-2016 VP0002 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF52540 203 371 5.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0002 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF52540 70 169 5.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF12631 MnmE helical domain 122 450 2.0E-61 T 22-04-2016 IPR025867 MnmE, helical domain VP0002 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:3.40.50.300 193 245 5.7E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0280 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0280 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 7 129 1.6E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VP0280 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.753 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VP0280 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site VP0280 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 1.8E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VP0280 a7cce014599a851da5a362b0f6ba5fe0 129 PANTHER PTHR11759 11 129 5.5E-71 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VP0280 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 22-04-2016 VP0280 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VP2709 e9530ed76ca6a976f127ee9bbcaf2e41 176 PANTHER PTHR10302 1 176 1.3E-55 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VP2709 e9530ed76ca6a976f127ee9bbcaf2e41 176 Gene3D G3DSA:2.40.50.140 4 176 4.6E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2709 e9530ed76ca6a976f127ee9bbcaf2e41 176 Pfam PF00436 Single-strand binding protein family 6 106 5.1E-44 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VP2709 e9530ed76ca6a976f127ee9bbcaf2e41 176 SUPERFAMILY SSF50249 4 176 1.27E-64 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2709 e9530ed76ca6a976f127ee9bbcaf2e41 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 1.8E-63 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VP2709 e9530ed76ca6a976f127ee9bbcaf2e41 176 PIRSF PIRSF002070 2 175 5.0E-38 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VP2709 e9530ed76ca6a976f127ee9bbcaf2e41 176 PANTHER PTHR10302:SF0 1 176 1.3E-55 T 22-04-2016 VP2709 e9530ed76ca6a976f127ee9bbcaf2e41 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.834 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VP0332 3e8a43453115d0124969b21b1fe74856 161 PANTHER PTHR34390 3 161 9.5E-49 T 22-04-2016 VP0332 3e8a43453115d0124969b21b1fe74856 161 Pfam PF12821 Threonine/Serine exporter, ThrE 17 151 8.1E-37 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE VPA0855 024d0b312ffe1de3887427f787604b61 580 Pfam PF02421 Ferrous iron transport protein B 1 134 7.9E-45 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 VPA0855 024d0b312ffe1de3887427f787604b61 580 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 1 566 2.3E-159 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VPA0855 024d0b312ffe1de3887427f787604b61 580 PANTHER PTHR11649 1 122 6.9E-214 T 22-04-2016 VPA0855 024d0b312ffe1de3887427f787604b61 580 SUPERFAMILY SSF52540 2 164 1.01E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0855 024d0b312ffe1de3887427f787604b61 580 PANTHER PTHR11649 233 573 6.9E-214 T 22-04-2016 VPA0855 024d0b312ffe1de3887427f787604b61 580 Pfam PF07664 Ferrous iron transport protein B C terminus 425 477 7.0E-19 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VPA0855 024d0b312ffe1de3887427f787604b61 580 Gene3D G3DSA:3.40.50.300 2 141 7.7E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0855 024d0b312ffe1de3887427f787604b61 580 Pfam PF07670 Nucleoside recognition 322 414 1.4E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VPA0855 024d0b312ffe1de3887427f787604b61 580 Pfam PF07670 Nucleoside recognition 482 574 6.7E-23 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VPA0855 024d0b312ffe1de3887427f787604b61 580 PANTHER PTHR11649:SF37 233 573 6.9E-214 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VPA0855 024d0b312ffe1de3887427f787604b61 580 PANTHER PTHR11649:SF37 1 122 6.9E-214 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 Gene3D G3DSA:3.90.10.10 648 658 1.9E-19 T 22-04-2016 VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 Gene3D G3DSA:3.90.10.10 291 345 1.9E-19 T 22-04-2016 VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 Gene3D G3DSA:3.90.10.10 214 246 1.9E-19 T 22-04-2016 VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 Gene3D G3DSA:3.90.10.10 580 615 1.9E-19 T 22-04-2016 VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 Gene3D G3DSA:3.90.10.10 501 502 1.9E-19 T 22-04-2016 VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 52 748 2.4E-127 T 22-04-2016 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 SUPERFAMILY SSF48695 192 398 2.32E-36 T 22-04-2016 IPR011031 Multihaem cytochrome VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 SUPERFAMILY SSF48695 520 736 2.32E-36 T 22-04-2016 IPR011031 Multihaem cytochrome VP1220 ff22f517e8460e89ab0ae4d9930a1c01 754 Pfam PF14522 Cytochrome c7 and related cytochrome c 644 736 6.5E-6 T 22-04-2016 VP1030 3de17b4415c9331de5f35d1839ed939a 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.9E-43 T 22-04-2016 VP1030 3de17b4415c9331de5f35d1839ed939a 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.6E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP1030 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:3.40.50.2300 54 173 1.8E-45 T 22-04-2016 VP1030 3de17b4415c9331de5f35d1839ed939a 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.832 T 22-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 VP1030 3de17b4415c9331de5f35d1839ed939a 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP1030 3de17b4415c9331de5f35d1839ed939a 334 SMART SM00354 1 71 1.3E-38 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP1030 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:1.10.260.40 2 53 8.8E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1030 3de17b4415c9331de5f35d1839ed939a 334 PANTHER PTHR30146 1 331 7.6E-160 T 22-04-2016 VP1030 3de17b4415c9331de5f35d1839ed939a 334 PANTHER PTHR30146:SF38 1 331 7.6E-160 T 22-04-2016 VP1030 3de17b4415c9331de5f35d1839ed939a 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1030 3de17b4415c9331de5f35d1839ed939a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP1030 3de17b4415c9331de5f35d1839ed939a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP1030 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:3.40.50.2300 174 311 9.6E-55 T 22-04-2016 VP1030 3de17b4415c9331de5f35d1839ed939a 334 SUPERFAMILY SSF53822 60 331 2.94E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP1535 507b49cb02e7983f4bb83e9420277ace 315 PANTHER PTHR31964 245 313 3.6E-66 T 22-04-2016 VP1535 507b49cb02e7983f4bb83e9420277ace 315 PANTHER PTHR31964 1 90 3.6E-66 T 22-04-2016 VP1535 507b49cb02e7983f4bb83e9420277ace 315 SUPERFAMILY SSF52402 4 158 7.28E-26 T 22-04-2016 VP1535 507b49cb02e7983f4bb83e9420277ace 315 Gene3D G3DSA:3.40.50.620 4 141 1.3E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1535 507b49cb02e7983f4bb83e9420277ace 315 Pfam PF00582 Universal stress protein family 177 301 1.3E-15 T 22-04-2016 IPR006016 UspA GO:0006950 VP1535 507b49cb02e7983f4bb83e9420277ace 315 Pfam PF00582 Universal stress protein family 4 148 3.1E-14 T 22-04-2016 IPR006016 UspA GO:0006950 VP1535 507b49cb02e7983f4bb83e9420277ace 315 SUPERFAMILY SSF52402 158 308 2.76E-24 T 22-04-2016 VP1535 507b49cb02e7983f4bb83e9420277ace 315 PANTHER PTHR31964:SF41 245 313 3.6E-66 T 22-04-2016 VP1535 507b49cb02e7983f4bb83e9420277ace 315 PANTHER PTHR31964:SF41 1 90 3.6E-66 T 22-04-2016 VP1535 507b49cb02e7983f4bb83e9420277ace 315 Gene3D G3DSA:3.40.50.620 142 300 7.1E-25 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0603 303309cc901952ccd7f8f3fb413dafaa 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 66.234 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 Pfam PF12404 Peptidase 5 81 7.9E-34 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 SUPERFAMILY SSF53187 105 428 4.08E-101 T 22-04-2016 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 PANTHER PTHR11963:SF20 43 432 1.8E-245 T 22-04-2016 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 PIRSF PIRSF036388 1 432 1.4E-223 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 8.5E-100 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 Gene3D G3DSA:3.40.630.10 94 430 2.0E-117 T 22-04-2016 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP0603 303309cc901952ccd7f8f3fb413dafaa 432 PANTHER PTHR11963 43 432 1.8E-245 T 22-04-2016 VP0283 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0283 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 3.0E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0283 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 9.3E-35 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0283 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0283 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0283 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0283 7fc5641f69291cbf481ff2b64259efcd 126 PANTHER PTHR14413 1 119 3.5E-66 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 1.0E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 Gene3D G3DSA:2.40.170.20 159 652 5.4E-99 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 PANTHER PTHR32552 30 652 1.5E-176 T 22-04-2016 VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 SUPERFAMILY SSF56935 33 652 2.5E-127 T 22-04-2016 VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 Gene3D G3DSA:2.170.130.10 25 158 1.5E-41 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 Pfam PF00593 TonB dependent receptor 397 650 7.7E-40 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 22-04-2016 IPR010916 TonB box, conserved site VP2602 2a0d7c9db89daa3d00eeee1f103d8268 652 PANTHER PTHR32552:SF15 30 652 1.5E-176 T 22-04-2016 VP2944 ae442308cfe643da81431b7870545e3e 284 PANTHER PTHR13600:SF19 1 202 5.6E-48 T 22-04-2016 VP2944 ae442308cfe643da81431b7870545e3e 284 PANTHER PTHR13600 1 202 5.6E-48 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VP2944 ae442308cfe643da81431b7870545e3e 284 Pfam PF04072 Leucine carboxyl methyltransferase 84 222 2.4E-8 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VP2944 ae442308cfe643da81431b7870545e3e 284 SUPERFAMILY SSF53335 33 266 1.54E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2944 ae442308cfe643da81431b7870545e3e 284 PIRSF PIRSF028177 17 284 2.2E-70 T 22-04-2016 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00174 VP2944 ae442308cfe643da81431b7870545e3e 284 Gene3D G3DSA:3.40.50.150 33 216 1.4E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2910 0541d2ac6c281bf9ed8cbeb9d21f87ba 423 Pfam PF00589 Phage integrase family 198 332 1.0E-6 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP2910 0541d2ac6c281bf9ed8cbeb9d21f87ba 423 SUPERFAMILY SSF56349 194 336 1.85E-12 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP2910 0541d2ac6c281bf9ed8cbeb9d21f87ba 423 Gene3D G3DSA:1.10.443.10 192 332 1.2E-12 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0650 1078241dc5e82d3a5f482c987455f67e 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.571 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VP0650 1078241dc5e82d3a5f482c987455f67e 294 Pfam PF01513 ATP-NAD kinase 8 273 6.0E-72 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VP0650 1078241dc5e82d3a5f482c987455f67e 294 Gene3D G3DSA:3.40.50.10330 4 151 6.4E-41 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VP0650 1078241dc5e82d3a5f482c987455f67e 294 PANTHER PTHR20275 8 290 1.3E-116 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VP0650 1078241dc5e82d3a5f482c987455f67e 294 Gene3D G3DSA:2.60.200.30 152 262 1.3E-41 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VP0650 1078241dc5e82d3a5f482c987455f67e 294 SUPERFAMILY SSF111331 8 290 4.45E-94 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain VP2824 9a1a6ed726d41c0a00df49171d81958c 354 Gene3D G3DSA:3.40.50.300 115 276 1.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2824 9a1a6ed726d41c0a00df49171d81958c 354 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 41 341 37.349 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VP2824 9a1a6ed726d41c0a00df49171d81958c 354 PANTHER PTHR32120:SF2 4 353 4.5E-156 T 22-04-2016 VP2824 9a1a6ed726d41c0a00df49171d81958c 354 Gene3D G3DSA:1.10.40.50 277 346 2.9E-24 T 22-04-2016 VP2824 9a1a6ed726d41c0a00df49171d81958c 354 PANTHER PTHR32120 4 353 4.5E-156 T 22-04-2016 VP2824 9a1a6ed726d41c0a00df49171d81958c 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 335 2.5E-90 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VP2824 9a1a6ed726d41c0a00df49171d81958c 354 Pfam PF03193 Protein of unknown function, DUF258 100 277 3.8E-57 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 VP2824 9a1a6ed726d41c0a00df49171d81958c 354 SUPERFAMILY SSF52540 114 337 7.32E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 Gene3D G3DSA:3.30.2010.10 63 146 6.6E-18 T 22-04-2016 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 Pfam PF01435 Peptidase family M48 69 253 2.3E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 PANTHER PTHR22726 8 348 1.8E-122 T 22-04-2016 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 Pfam PF14559 Tetratricopeptide repeat 351 416 4.5E-12 T 22-04-2016 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 425 458 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 340 373 23.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 306 339 45.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 PANTHER PTHR22726:SF10 8 348 1.8E-122 T 22-04-2016 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 Gene3D G3DSA:1.25.40.10 310 455 2.6E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 480 32.501 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VP2278 37d655ce0f30ca1bf25c11a88432c3ec 483 SUPERFAMILY SSF48452 310 453 6.17E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPA0445 521470535d60935dfeb5e944a1715c42 118 PANTHER PTHR10169:SF30 1 118 3.9E-65 T 22-04-2016 VPA0445 521470535d60935dfeb5e944a1715c42 118 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 2 116 3.9E-20 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPA0445 521470535d60935dfeb5e944a1715c42 118 PANTHER PTHR10169 1 118 3.9E-65 T 22-04-2016 VPA0445 521470535d60935dfeb5e944a1715c42 118 Gene3D G3DSA:1.10.268.10 12 109 4.8E-31 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPA0445 521470535d60935dfeb5e944a1715c42 118 SUPERFAMILY SSF56719 2 118 6.15E-25 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 22 134 8.8E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PANTHER PTHR12220 1 136 6.1E-74 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 3.5E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VP0264 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VP2109 b1d84c569586ddbff5b650c541c9ef28 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VP2109 b1d84c569586ddbff5b650c541c9ef28 138 SUPERFAMILY SSF54593 3 130 3.76E-36 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP2109 b1d84c569586ddbff5b650c541c9ef28 138 PANTHER PTHR10374 1 134 4.0E-61 T 22-04-2016 VP2109 b1d84c569586ddbff5b650c541c9ef28 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 8.3E-69 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VP2109 b1d84c569586ddbff5b650c541c9ef28 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 6.3E-24 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VP2109 b1d84c569586ddbff5b650c541c9ef28 138 Gene3D G3DSA:3.10.180.10 5 131 2.1E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP2109 b1d84c569586ddbff5b650c541c9ef28 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VP2659 adf42bd5efc90662e15e501119b874df 84 PANTHER PTHR12735 1 84 1.1E-35 T 22-04-2016 VP2659 adf42bd5efc90662e15e501119b874df 84 Pfam PF01722 BolA-like protein 18 74 8.9E-15 T 22-04-2016 IPR002634 BolA protein VP2659 adf42bd5efc90662e15e501119b874df 84 Gene3D G3DSA:3.30.300.90 3 80 2.8E-27 T 22-04-2016 IPR002634 BolA protein VP2659 adf42bd5efc90662e15e501119b874df 84 PANTHER PTHR12735:SF24 1 84 1.1E-35 T 22-04-2016 VP2659 adf42bd5efc90662e15e501119b874df 84 PIRSF PIRSF003113 2 83 1.7E-22 T 22-04-2016 IPR002634 BolA protein VP2659 adf42bd5efc90662e15e501119b874df 84 SUPERFAMILY SSF82657 4 82 2.75E-28 T 22-04-2016 IPR002634 BolA protein VP2757 9d1dcc816438d816f7a4e717f23bb353 404 Pfam PF00764 Arginosuccinate synthase 10 396 2.7E-145 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.557 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:3.90.1260.10 179 403 2.5E-88 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 PANTHER PTHR11587:SF6 6 404 0.0 T 22-04-2016 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 SUPERFAMILY SSF52402 7 170 3.75E-47 T 22-04-2016 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 PANTHER PTHR11587 6 404 0.0 T 22-04-2016 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 SUPERFAMILY SSF69864 177 402 5.49E-88 T 22-04-2016 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 4.4E-135 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2757 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:3.40.50.620 7 176 1.2E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0573 0f343c436571f863e2331d640ab352bc 696 PANTHER PTHR30218:SF0 1 690 0.0 T 22-04-2016 VP0573 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.1840.10 107 300 5.4E-56 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VP0573 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.870.10 315 499 2.8E-72 T 22-04-2016 VP0573 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF140356 4 104 4.05E-32 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VP0573 0f343c436571f863e2331d640ab352bc 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 6.0E-47 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VP0573 0f343c436571f863e2331d640ab352bc 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.3E-145 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VP0573 0f343c436571f863e2331d640ab352bc 696 PIRSF PIRSF015589 1 694 1.8E-252 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VP0573 0f343c436571f863e2331d640ab352bc 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.7E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VP0573 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF56024 315 496 1.29E-53 T 22-04-2016 VP0573 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF56024 500 684 6.28E-70 T 22-04-2016 VP0573 0f343c436571f863e2331d640ab352bc 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 32.333 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VP0573 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF143724 107 313 8.24E-64 T 22-04-2016 VP0573 0f343c436571f863e2331d640ab352bc 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 9.6E-264 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VP0573 0f343c436571f863e2331d640ab352bc 696 PANTHER PTHR30218 1 690 0.0 T 22-04-2016 VP0573 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.870.10 500 684 2.6E-71 T 22-04-2016 VP1703 8f66b2e7d97d954d5983028d5d7d67d6 506 Gene3D G3DSA:3.40.605.10 16 293 2.2E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP1703 8f66b2e7d97d954d5983028d5d7d67d6 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 4.1E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP1703 8f66b2e7d97d954d5983028d5d7d67d6 506 SUPERFAMILY SSF53720 13 497 3.27E-162 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP1703 8f66b2e7d97d954d5983028d5d7d67d6 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VP1703 8f66b2e7d97d954d5983028d5d7d67d6 506 Gene3D G3DSA:3.40.309.10 294 470 3.9E-61 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP1703 8f66b2e7d97d954d5983028d5d7d67d6 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VP1703 8f66b2e7d97d954d5983028d5d7d67d6 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 VP1703 8f66b2e7d97d954d5983028d5d7d67d6 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 VP0039 dad11f8f5f777e46cbf268a8abf22bd5 368 PANTHER PTHR30469:SF11 1 364 2.3E-148 T 22-04-2016 VP0039 dad11f8f5f777e46cbf268a8abf22bd5 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 2.5E-74 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VP0039 dad11f8f5f777e46cbf268a8abf22bd5 368 SUPERFAMILY SSF111369 58 273 1.44E-42 T 22-04-2016 VP0039 dad11f8f5f777e46cbf268a8abf22bd5 368 PANTHER PTHR30469 1 364 2.3E-148 T 22-04-2016 VP0039 dad11f8f5f777e46cbf268a8abf22bd5 368 Gene3D G3DSA:2.40.50.100 168 194 9.9E-16 T 22-04-2016 VP0039 dad11f8f5f777e46cbf268a8abf22bd5 368 Gene3D G3DSA:2.40.50.100 70 102 9.9E-16 T 22-04-2016 VP0039 dad11f8f5f777e46cbf268a8abf22bd5 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 1.6E-29 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VP0039 dad11f8f5f777e46cbf268a8abf22bd5 368 Gene3D G3DSA:1.20.120.30 108 167 5.3E-4 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 VP1943 9152568fd65d5297958657e51fc8e9f4 185 PANTHER PTHR14269:SF13 2 179 7.2E-92 T 22-04-2016 VP1943 9152568fd65d5297958657e51fc8e9f4 185 PANTHER PTHR14269 2 179 7.2E-92 T 22-04-2016 VP1943 9152568fd65d5297958657e51fc8e9f4 185 PIRSF PIRSF000847 1 184 3.3E-46 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VP1943 9152568fd65d5297958657e51fc8e9f4 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.8E-18 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VP1943 9152568fd65d5297958657e51fc8e9f4 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VP1943 9152568fd65d5297958657e51fc8e9f4 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 8.6E-55 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VP1730 943f3ab69f3665ad0c41e62a5345051f 519 Pfam PF00501 AMP-binding enzyme 10 391 1.9E-59 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP1730 943f3ab69f3665ad0c41e62a5345051f 519 Gene3D G3DSA:2.30.38.10 329 381 3.9E-8 T 22-04-2016 VP1730 943f3ab69f3665ad0c41e62a5345051f 519 Gene3D G3DSA:3.40.50.980 4 164 5.5E-25 T 22-04-2016 VP1730 943f3ab69f3665ad0c41e62a5345051f 519 PANTHER PTHR24096 4 459 4.7E-71 T 22-04-2016 VP1730 943f3ab69f3665ad0c41e62a5345051f 519 SUPERFAMILY SSF56801 2 489 3.14E-86 T 22-04-2016 VP1730 943f3ab69f3665ad0c41e62a5345051f 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 22-04-2016 IPR020845 AMP-binding, conserved site VP1730 943f3ab69f3665ad0c41e62a5345051f 519 Gene3D G3DSA:3.40.50.980 165 328 8.1E-23 T 22-04-2016 VP0253 ce2a62a07e1362ff114dab5810add4cf 734 Gene3D G3DSA:3.40.50.300 460 633 1.6E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0253 ce2a62a07e1362ff114dab5810add4cf 734 SUPERFAMILY SSF52540 462 632 3.16E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0253 ce2a62a07e1362ff114dab5810add4cf 734 Pfam PF00271 Helicase conserved C-terminal domain 501 589 4.1E-8 T 22-04-2016 IPR001650 Helicase, C-terminal VP0253 ce2a62a07e1362ff114dab5810add4cf 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.392 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VP0253 ce2a62a07e1362ff114dab5810add4cf 734 SMART SM00490 493 590 4.0E-13 T 22-04-2016 IPR001650 Helicase, C-terminal VP0253 ce2a62a07e1362ff114dab5810add4cf 734 SUPERFAMILY SSF52540 71 123 3.56E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0253 ce2a62a07e1362ff114dab5810add4cf 734 SUPERFAMILY SSF52540 150 380 3.56E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0253 ce2a62a07e1362ff114dab5810add4cf 734 SMART SM00487 197 389 1.1E-17 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP0253 ce2a62a07e1362ff114dab5810add4cf 734 PANTHER PTHR30580 1 734 6.2E-284 T 22-04-2016 VP0253 ce2a62a07e1362ff114dab5810add4cf 734 Gene3D G3DSA:3.40.50.300 198 382 7.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0253 ce2a62a07e1362ff114dab5810add4cf 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 3.4E-192 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VP0253 ce2a62a07e1362ff114dab5810add4cf 734 Pfam PF00270 DEAD/DEAH box helicase 219 364 1.7E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.2E-251 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 Gene3D G3DSA:3.50.50.60 237 398 1.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 Gene3D G3DSA:3.40.50.720 399 468 9.8E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 Gene3D G3DSA:3.40.50.720 150 236 9.8E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 PANTHER PTHR11938:SF93 23 470 7.5E-298 T 22-04-2016 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 9.3E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 SUPERFAMILY SSF51971 145 399 3.24E-69 T 22-04-2016 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.2E-36 T 22-04-2016 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.2E-36 T 22-04-2016 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.2E-36 T 22-04-2016 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.2E-36 T 22-04-2016 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.2E-36 T 22-04-2016 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 PANTHER PTHR11938 23 470 7.5E-298 T 22-04-2016 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.9E-39 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 SUPERFAMILY SSF46548 6 157 1.52E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP0481 8666bcce7b00cd347cde5485f73fc2b8 470 Gene3D G3DSA:1.10.1060.10 5 149 1.3E-47 T 22-04-2016 VP2407 8c2c0a06227ba9bea8d1b725e597567d 379 PANTHER PTHR33567:SF3 1 379 9.0E-123 T 22-04-2016 VP2407 8c2c0a06227ba9bea8d1b725e597567d 379 PANTHER PTHR33567 1 379 9.0E-123 T 22-04-2016 VP2407 8c2c0a06227ba9bea8d1b725e597567d 379 Pfam PF02417 Chromate transporter 211 373 7.6E-35 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VP2407 8c2c0a06227ba9bea8d1b725e597567d 379 Pfam PF02417 Chromate transporter 3 168 3.1E-33 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VP2407 8c2c0a06227ba9bea8d1b725e597567d 379 PIRSF PIRSF004810 1 379 5.4E-115 T 22-04-2016 IPR014047 Chromate transporter, long chain VP2407 8c2c0a06227ba9bea8d1b725e597567d 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 2.0E-92 T 22-04-2016 IPR014047 Chromate transporter, long chain VP0119 1e783470a65e37159620e656a5a29351 348 SUPERFAMILY SSF55874 198 347 7.07E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0119 1e783470a65e37159620e656a5a29351 348 SMART SM00387 233 348 1.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0119 1e783470a65e37159620e656a5a29351 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 9.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0119 1e783470a65e37159620e656a5a29351 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 9.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0119 1e783470a65e37159620e656a5a29351 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 9.1E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP0119 1e783470a65e37159620e656a5a29351 348 SUPERFAMILY SSF55785 8 102 8.9E-9 T 22-04-2016 IPR000014 PAS domain VP0119 1e783470a65e37159620e656a5a29351 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.8E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0119 1e783470a65e37159620e656a5a29351 348 SMART SM00388 129 194 3.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0119 1e783470a65e37159620e656a5a29351 348 Pfam PF00989 PAS fold 7 111 2.5E-16 T 22-04-2016 IPR013767 PAS fold GO:0006355 VP0119 1e783470a65e37159620e656a5a29351 348 Gene3D G3DSA:3.30.565.10 194 348 2.2E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0119 1e783470a65e37159620e656a5a29351 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 4.1E-7 T 22-04-2016 IPR000014 PAS domain VP0119 1e783470a65e37159620e656a5a29351 348 PANTHER PTHR24423:SF488 5 266 1.0E-164 T 22-04-2016 VP0119 1e783470a65e37159620e656a5a29351 348 PANTHER PTHR24423:SF488 282 348 1.0E-164 T 22-04-2016 VP0119 1e783470a65e37159620e656a5a29351 348 Gene3D G3DSA:3.30.450.20 7 111 3.5E-28 T 22-04-2016 VP0119 1e783470a65e37159620e656a5a29351 348 PANTHER PTHR24423 5 266 1.0E-164 T 22-04-2016 VP0119 1e783470a65e37159620e656a5a29351 348 PANTHER PTHR24423 282 348 1.0E-164 T 22-04-2016 VP0119 1e783470a65e37159620e656a5a29351 348 Gene3D G3DSA:1.10.287.130 124 186 3.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0119 1e783470a65e37159620e656a5a29351 348 SUPERFAMILY SSF47384 125 190 2.16E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP0119 1e783470a65e37159620e656a5a29351 348 SMART SM00091 4 72 1.5E-7 T 22-04-2016 IPR000014 PAS domain VP0119 1e783470a65e37159620e656a5a29351 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1367 a35d32180c0f46ddca425db06762f41b 299 Gene3D G3DSA:1.10.10.10 2 80 2.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1367 a35d32180c0f46ddca425db06762f41b 299 Gene3D G3DSA:3.40.190.10 219 255 5.4E-4 T 22-04-2016 VP1367 a35d32180c0f46ddca425db06762f41b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.4E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1367 a35d32180c0f46ddca425db06762f41b 299 Pfam PF03466 LysR substrate binding domain 94 278 3.7E-12 T 22-04-2016 IPR005119 LysR, substrate-binding VP1367 a35d32180c0f46ddca425db06762f41b 299 PANTHER PTHR30126:SF29 3 243 5.5E-35 T 22-04-2016 VP1367 a35d32180c0f46ddca425db06762f41b 299 PANTHER PTHR30126 3 243 5.5E-35 T 22-04-2016 VP1367 a35d32180c0f46ddca425db06762f41b 299 Gene3D G3DSA:3.40.190.10 96 210 4.2E-6 T 22-04-2016 VP1367 a35d32180c0f46ddca425db06762f41b 299 SUPERFAMILY SSF46785 4 84 2.36E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1367 a35d32180c0f46ddca425db06762f41b 299 SUPERFAMILY SSF53850 94 295 2.53E-14 T 22-04-2016 VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PANTHER PTHR33705 1 91 5.6E-38 T 22-04-2016 VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.8E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 Gene3D G3DSA:3.30.1340.10 3 89 9.9E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 SUPERFAMILY SSF55594 4 90 7.07E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 8.7E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 8.7E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 8.7E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PANTHER PTHR33705:SF2 1 91 5.6E-38 T 22-04-2016 VP2674 8a6bad0e7acaa4524cbccb70f3ae63a1 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 1.8E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP1482 500930ec337d6a868bd7e969f183ae2e 323 SUPERFAMILY SSF52172 1 125 8.68E-30 T 22-04-2016 IPR011006 CheY-like superfamily VP1482 500930ec337d6a868bd7e969f183ae2e 323 SMART SM00448 1 113 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1482 500930ec337d6a868bd7e969f183ae2e 323 Gene3D G3DSA:3.40.1550.10 143 318 7.5E-20 T 22-04-2016 IPR028976 CheC-like domain VP1482 500930ec337d6a868bd7e969f183ae2e 323 Gene3D G3DSA:3.40.50.2300 1 116 1.2E-29 T 22-04-2016 VP1482 500930ec337d6a868bd7e969f183ae2e 323 Pfam PF00072 Response regulator receiver domain 3 110 4.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1482 500930ec337d6a868bd7e969f183ae2e 323 PANTHER PTHR26402 1 110 4.0E-31 T 22-04-2016 VP1482 500930ec337d6a868bd7e969f183ae2e 323 SUPERFAMILY SSF103039 142 321 1.31E-30 T 22-04-2016 IPR028976 CheC-like domain VP0917 a21f2e258e433a4c70f48945817472c4 200 Pfam PF00574 Clp protease 17 197 1.3E-89 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VP0917 a21f2e258e433a4c70f48945817472c4 200 PRINTS PR00127 Clp protease catalytic subunit P signature 116 135 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VP0917 a21f2e258e433a4c70f48945817472c4 200 PRINTS PR00127 Clp protease catalytic subunit P signature 64 84 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VP0917 a21f2e258e433a4c70f48945817472c4 200 PRINTS PR00127 Clp protease catalytic subunit P signature 173 192 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VP0917 a21f2e258e433a4c70f48945817472c4 200 PRINTS PR00127 Clp protease catalytic subunit P signature 95 112 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VP0917 a21f2e258e433a4c70f48945817472c4 200 PRINTS PR00127 Clp protease catalytic subunit P signature 24 39 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VP0917 a21f2e258e433a4c70f48945817472c4 200 PANTHER PTHR10381 4 198 6.2E-142 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VP0917 a21f2e258e433a4c70f48945817472c4 200 SUPERFAMILY SSF52096 15 198 7.87E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP0917 a21f2e258e433a4c70f48945817472c4 200 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 95 106 - T 22-04-2016 IPR018215 ClpP, Ser active site VP0917 a21f2e258e433a4c70f48945817472c4 200 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 8 198 44.409 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VP0917 a21f2e258e433a4c70f48945817472c4 200 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 7 197 9.9E-108 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VP0917 a21f2e258e433a4c70f48945817472c4 200 PANTHER PTHR10381:SF22 4 198 6.2E-142 T 22-04-2016 VP0917 a21f2e258e433a4c70f48945817472c4 200 Gene3D G3DSA:3.90.226.10 8 197 2.3E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP0917 a21f2e258e433a4c70f48945817472c4 200 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 117 130 - T 22-04-2016 IPR033135 ClpP, histidine active site VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 Pfam PF01546 Peptidase family M20/M25/M40 125 504 2.0E-36 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 SUPERFAMILY SSF55031 351 398 4.0E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 SUPERFAMILY SSF55031 251 297 4.0E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 Gene3D G3DSA:3.30.70.360 350 398 1.1E-18 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 Gene3D G3DSA:3.30.70.360 260 299 1.1E-18 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 Gene3D G3DSA:3.40.630.10 51 259 5.1E-51 T 22-04-2016 VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 Gene3D G3DSA:3.40.630.10 440 506 5.1E-51 T 22-04-2016 VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 Pfam PF07687 Peptidase dimerisation domain 247 398 4.5E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 PANTHER PTHR11014 42 507 1.5E-127 T 22-04-2016 VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 PANTHER PTHR11014:SF16 42 507 1.5E-127 T 22-04-2016 VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 SUPERFAMILY SSF53187 414 506 1.34E-48 T 22-04-2016 VP1365 50394a4cddf5c184bbff2dd1bfdc5597 509 SUPERFAMILY SSF53187 46 239 1.34E-48 T 22-04-2016 VP1231 546d5773555e403ac73b7365e7435bd9 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 9.9E-113 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VP1231 546d5773555e403ac73b7365e7435bd9 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.8E-31 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VP1231 546d5773555e403ac73b7365e7435bd9 400 PANTHER PTHR37480 2 400 1.8E-254 T 22-04-2016 VP1231 546d5773555e403ac73b7365e7435bd9 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VP1231 546d5773555e403ac73b7365e7435bd9 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.589 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VP1231 546d5773555e403ac73b7365e7435bd9 400 Gene3D G3DSA:3.40.50.720 184 281 8.6E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1231 546d5773555e403ac73b7365e7435bd9 400 Gene3D G3DSA:3.40.50.720 40 151 8.6E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1275 0ed2eedeb74308b6910030297107ab05 340 PANTHER PTHR11358 7 331 1.0E-132 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VP1275 0ed2eedeb74308b6910030297107ab05 340 Gene3D G3DSA:3.40.800.10 8 334 4.1E-113 T 22-04-2016 IPR023696 Ureohydrolase domain VP1275 0ed2eedeb74308b6910030297107ab05 340 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 VP1275 0ed2eedeb74308b6910030297107ab05 340 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.999 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VP1275 0ed2eedeb74308b6910030297107ab05 340 Pfam PF00491 Arginase family 46 325 3.5E-61 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VP1275 0ed2eedeb74308b6910030297107ab05 340 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 9.8E-116 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VP1275 0ed2eedeb74308b6910030297107ab05 340 SUPERFAMILY SSF52768 13 331 1.69E-84 T 22-04-2016 VP1275 0ed2eedeb74308b6910030297107ab05 340 PRINTS PR00116 Arginase signature 125 140 1.7E-5 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VP1275 0ed2eedeb74308b6910030297107ab05 340 PRINTS PR00116 Arginase signature 252 281 1.7E-5 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VP1275 0ed2eedeb74308b6910030297107ab05 340 PANTHER PTHR11358:SF35 7 331 1.0E-132 T 22-04-2016 VP1275 0ed2eedeb74308b6910030297107ab05 340 PIRSF PIRSF036979 24 333 2.1E-27 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VP2815 2d371387a4767901846a0645ed8092d3 400 PANTHER PTHR10264:SF51 7 386 1.1E-193 T 22-04-2016 IPR010201 HflK GO:0016021 VP2815 2d371387a4767901846a0645ed8092d3 400 Pfam PF01145 SPFH domain / Band 7 family 92 263 4.9E-30 T 22-04-2016 IPR001107 Band 7 domain VP2815 2d371387a4767901846a0645ed8092d3 400 SUPERFAMILY SSF117892 125 253 9.42E-22 T 22-04-2016 IPR001107 Band 7 domain VP2815 2d371387a4767901846a0645ed8092d3 400 TIGRFAM TIGR01933 hflK: HflK protein 90 350 1.5E-121 T 22-04-2016 IPR010201 HflK GO:0016021 VP2815 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 95 117 1.3E-6 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP2815 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 198 221 1.3E-6 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP2815 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 142 163 1.3E-6 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP2815 2d371387a4767901846a0645ed8092d3 400 SMART SM00244 88 248 2.1E-52 T 22-04-2016 IPR001107 Band 7 domain VP2815 2d371387a4767901846a0645ed8092d3 400 PANTHER PTHR10264 7 386 1.1E-193 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP2815 2d371387a4767901846a0645ed8092d3 400 Pfam PF12221 Bacterial membrane protein N terminal 1 58 6.0E-14 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal VP0050 eabb4de582a22f020b62a8ff97c42986 318 SUPERFAMILY SSF161098 99 300 3.66E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0050 eabb4de582a22f020b62a8ff97c42986 318 Gene3D G3DSA:1.10.3720.10 97 313 1.5E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0050 eabb4de582a22f020b62a8ff97c42986 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 1.5E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VP0050 eabb4de582a22f020b62a8ff97c42986 318 PANTHER PTHR30465:SF67 13 317 9.4E-207 T 22-04-2016 VP0050 eabb4de582a22f020b62a8ff97c42986 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 4.1E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0050 eabb4de582a22f020b62a8ff97c42986 318 PANTHER PTHR30465 13 317 9.4E-207 T 22-04-2016 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 9.3E-59 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 PANTHER PTHR24423:SF553 31 62 1.1E-152 T 22-04-2016 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 PANTHER PTHR24423:SF553 188 465 1.1E-152 T 22-04-2016 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 Gene3D G3DSA:1.10.287.130 238 306 7.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 SMART SM00388 248 310 5.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 SUPERFAMILY SSF47384 234 309 2.75E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 PANTHER PTHR24423 31 62 1.1E-152 T 22-04-2016 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 PANTHER PTHR24423 188 465 1.1E-152 T 22-04-2016 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 Pfam PF00672 HAMP domain 177 243 1.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 308 3.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 462 5.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 Gene3D G3DSA:3.30.565.10 312 463 2.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 SUPERFAMILY SSF55874 300 462 9.82E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 SMART SM00304 194 247 9.6E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP2859 794d37e0b25dd443e9f26ba40b9dde10 467 SMART SM00387 354 464 2.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0305 735f2d8ca7896ac6acce7e59e1c43eeb 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 1.9E-26 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VP0305 735f2d8ca7896ac6acce7e59e1c43eeb 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 5.0E-31 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VP0305 735f2d8ca7896ac6acce7e59e1c43eeb 66 Gene3D G3DSA:3.30.1910.10 2 65 8.0E-28 T 22-04-2016 VP1183 df71da99c5780d079d12a588b38283fc 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 484 1.1E-153 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VP1183 df71da99c5780d079d12a588b38283fc 484 SMART SM00155 219 246 4.0E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VP1183 df71da99c5780d079d12a588b38283fc 484 SMART SM00155 397 424 9.5E-7 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VP1183 df71da99c5780d079d12a588b38283fc 484 SUPERFAMILY SSF56024 66 313 3.81E-50 T 22-04-2016 VP1183 df71da99c5780d079d12a588b38283fc 484 Gene3D G3DSA:3.30.870.10 313 460 2.7E-35 T 22-04-2016 VP1183 df71da99c5780d079d12a588b38283fc 484 Gene3D G3DSA:3.30.870.10 113 312 4.0E-37 T 22-04-2016 VP1183 df71da99c5780d079d12a588b38283fc 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 1.5E-6 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal VP1183 df71da99c5780d079d12a588b38283fc 484 Pfam PF13091 PLD-like domain 134 267 1.0E-15 T 22-04-2016 IPR025202 Phospholipase D-like domain VP1183 df71da99c5780d079d12a588b38283fc 484 Pfam PF13091 PLD-like domain 327 444 5.2E-24 T 22-04-2016 IPR025202 Phospholipase D-like domain VP1183 df71da99c5780d079d12a588b38283fc 484 PANTHER PTHR21248 18 484 2.3E-255 T 22-04-2016 VP1183 df71da99c5780d079d12a588b38283fc 484 SUPERFAMILY SSF56024 273 469 1.3E-48 T 22-04-2016 VP1183 df71da99c5780d079d12a588b38283fc 484 PANTHER PTHR21248:SF9 18 484 2.3E-255 T 22-04-2016 VP1183 df71da99c5780d079d12a588b38283fc 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.874 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VP2601 fee8dc05048b902085966dc663b6ed9d 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 6.6E-190 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VP2601 fee8dc05048b902085966dc663b6ed9d 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.4E-55 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 159 3.8E-49 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 PIRSF PIRSF000149 1 342 4.8E-127 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 PANTHER PTHR10836 1 345 2.1E-235 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 SUPERFAMILY SSF55347 159 321 6.55E-59 T 22-04-2016 VP2601 fee8dc05048b902085966dc663b6ed9d 345 SMART SM00846 2 159 1.9E-73 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 SUPERFAMILY SSF51735 2 183 3.39E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2601 fee8dc05048b902085966dc663b6ed9d 345 PANTHER PTHR10836:SF47 1 345 2.1E-235 T 22-04-2016 VP2601 fee8dc05048b902085966dc663b6ed9d 345 Gene3D G3DSA:3.30.360.10 168 322 1.5E-61 T 22-04-2016 VP2601 fee8dc05048b902085966dc663b6ed9d 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.903 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VP2601 fee8dc05048b902085966dc663b6ed9d 345 Gene3D G3DSA:3.40.50.720 1 167 8.6E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2601 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2601 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VP2125 d6b6b4b1122a81bea4fcc5b28906d47c 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 5.0E-163 T 22-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VP2125 d6b6b4b1122a81bea4fcc5b28906d47c 477 PANTHER PTHR33451:SF1 1 467 0.0 T 22-04-2016 VP2125 d6b6b4b1122a81bea4fcc5b28906d47c 477 PANTHER PTHR33451 1 467 0.0 T 22-04-2016 VP2125 d6b6b4b1122a81bea4fcc5b28906d47c 477 Pfam PF03553 Na+/H+ antiporter family 161 453 2.9E-66 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VP2712 6e38795d79e320cca1e674ebb23094b2 940 PANTHER PTHR32282 1 940 0.0 T 22-04-2016 VP2712 6e38795d79e320cca1e674ebb23094b2 940 PANTHER PTHR32282:SF2 1 940 0.0 T 22-04-2016 VP2712 6e38795d79e320cca1e674ebb23094b2 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:3.40.50.300 2 51 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:3.40.50.300 477 596 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:3.40.50.300 605 671 4.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:3.40.50.300 820 938 4.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2712 6e38795d79e320cca1e674ebb23094b2 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2712 6e38795d79e320cca1e674ebb23094b2 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Pfam PF00005 ABC transporter 622 859 5.3E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:1.20.1580.10 250 283 3.0E-54 T 22-04-2016 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:1.20.1580.10 91 129 3.0E-54 T 22-04-2016 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:1.20.1580.10 406 476 3.0E-54 T 22-04-2016 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.959 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:1.10.8.280 285 405 8.8E-45 T 22-04-2016 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:3.30.1490.20 200 248 3.4E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:3.30.1490.20 130 153 3.4E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP2712 6e38795d79e320cca1e674ebb23094b2 940 Gene3D G3DSA:1.20.1580.10 693 819 6.0E-55 T 22-04-2016 VP2712 6e38795d79e320cca1e674ebb23094b2 940 SUPERFAMILY SSF52540 429 568 1.84E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2712 6e38795d79e320cca1e674ebb23094b2 940 SUPERFAMILY SSF52540 4 204 1.84E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2712 6e38795d79e320cca1e674ebb23094b2 940 SUPERFAMILY SSF52540 620 912 4.28E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1046 178e4280fc7102085f0ac519eefc4de0 289 Pfam PF01904 Protein of unknown function DUF72 24 262 1.1E-56 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VP1046 178e4280fc7102085f0ac519eefc4de0 289 SUPERFAMILY SSF117396 6 266 3.14E-72 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VP1046 178e4280fc7102085f0ac519eefc4de0 289 PANTHER PTHR30348 7 289 4.2E-82 T 22-04-2016 VP1046 178e4280fc7102085f0ac519eefc4de0 289 PANTHER PTHR30348:SF3 7 289 4.2E-82 T 22-04-2016 VP1046 178e4280fc7102085f0ac519eefc4de0 289 Gene3D G3DSA:3.20.20.410 2 275 5.6E-76 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VP2334 ae58c520445bd43c589bf3259bc1df21 222 Pfam PF04391 Protein of unknown function (DUF533) 43 221 1.0E-61 T 22-04-2016 IPR007486 Inner membrane protein YebE VP2334 ae58c520445bd43c589bf3259bc1df21 222 Gene3D G3DSA:1.10.3680.10 80 221 2.4E-29 T 22-04-2016 IPR029024 TerB-like VP2334 ae58c520445bd43c589bf3259bc1df21 222 SUPERFAMILY SSF158682 81 221 1.83E-27 T 22-04-2016 IPR029024 TerB-like VP0457 dea8a802f95fb4a76145d5351ed32d78 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.3E-157 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0457 dea8a802f95fb4a76145d5351ed32d78 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.2E-37 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0457 dea8a802f95fb4a76145d5351ed32d78 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.429 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0457 dea8a802f95fb4a76145d5351ed32d78 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0457 dea8a802f95fb4a76145d5351ed32d78 360 PANTHER PTHR22926:SF5 2 360 1.8E-190 T 22-04-2016 VP0457 dea8a802f95fb4a76145d5351ed32d78 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0457 dea8a802f95fb4a76145d5351ed32d78 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP0457 dea8a802f95fb4a76145d5351ed32d78 360 PANTHER PTHR22926 2 360 1.8E-190 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VP2230 9504d2f6034e7bea578c4ae9b3fe78cc 246 PANTHER PTHR22617 68 246 1.5E-73 T 22-04-2016 VP2230 9504d2f6034e7bea578c4ae9b3fe78cc 246 Gene3D G3DSA:1.10.287.500 58 189 2.1E-50 T 22-04-2016 VP2230 9504d2f6034e7bea578c4ae9b3fe78cc 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 2.9E-76 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VP2230 9504d2f6034e7bea578c4ae9b3fe78cc 246 PANTHER PTHR22617:SF35 68 246 1.5E-73 T 22-04-2016 VP2230 9504d2f6034e7bea578c4ae9b3fe78cc 246 SUPERFAMILY SSF75708 26 245 7.32E-65 T 22-04-2016 VP2230 9504d2f6034e7bea578c4ae9b3fe78cc 246 PIRSF PIRSF002884 13 246 3.9E-89 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VP0576 f92553bd4a3c438164a91c43a31b311a 272 PANTHER PTHR24220 27 271 5.4E-141 T 22-04-2016 VP0576 f92553bd4a3c438164a91c43a31b311a 272 PANTHER PTHR24220:SF585 27 271 5.4E-141 T 22-04-2016 VP0576 f92553bd4a3c438164a91c43a31b311a 272 SUPERFAMILY SSF52540 22 258 6.98E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0576 f92553bd4a3c438164a91c43a31b311a 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0576 f92553bd4a3c438164a91c43a31b311a 272 Pfam PF00005 ABC transporter 41 197 2.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0576 f92553bd4a3c438164a91c43a31b311a 272 Gene3D G3DSA:3.40.50.300 19 264 8.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0576 f92553bd4a3c438164a91c43a31b311a 272 SMART SM00382 50 252 1.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0576 f92553bd4a3c438164a91c43a31b311a 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 5.2E-124 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF55008 2 62 1.96E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP0758 a262469eab8b2617737a79f699df583e 911 Gene3D G3DSA:3.30.70.100 5 62 2.0E-9 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF81665 497 592 1.14E-9 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF81665 362 400 1.14E-9 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF81665 845 862 1.14E-9 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 329 905 1.2E-183 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VP0758 a262469eab8b2617737a79f699df583e 911 Pfam PF00122 E1-E2 ATPase 367 588 6.6E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VP0758 a262469eab8b2617737a79f699df583e 911 ProSitePatterns PS01047 Heavy-metal-associated domain. 177 206 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VP0758 a262469eab8b2617737a79f699df583e 911 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 310 906 2.6E-183 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 368 874 5.7E-93 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF81653 399 496 2.75E-25 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 Gene3D G3DSA:3.30.70.100 171 257 5.3E-22 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PANTHER PTHR24093 173 906 0.0 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 Gene3D G3DSA:3.40.50.1000 724 864 1.6E-54 T 22-04-2016 IPR023214 HAD-like domain VP0758 a262469eab8b2617737a79f699df583e 911 Gene3D G3DSA:3.40.50.1000 570 614 1.6E-54 T 22-04-2016 IPR023214 HAD-like domain VP0758 a262469eab8b2617737a79f699df583e 911 Pfam PF00702 haloacid dehalogenase-like hydrolase 594 810 1.5E-48 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF56784 596 616 1.6E-60 T 22-04-2016 IPR023214 HAD-like domain VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF56784 654 902 1.6E-60 T 22-04-2016 IPR023214 HAD-like domain VP0758 a262469eab8b2617737a79f699df583e 911 Pfam PF00403 Heavy-metal-associated domain 6 61 4.0E-7 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP0758 a262469eab8b2617737a79f699df583e 911 Pfam PF00403 Heavy-metal-associated domain 177 236 7.7E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP0758 a262469eab8b2617737a79f699df583e 911 Gene3D G3DSA:3.30.70.100 66 125 4.8E-7 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PANTHER PTHR24093:SF319 173 906 0.0 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00943 Copper-transporting ATPase signature 869 883 2.0E-13 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00943 Copper-transporting ATPase signature 519 533 2.0E-13 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00943 Copper-transporting ATPase signature 187 201 2.0E-13 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00943 Copper-transporting ATPase signature 386 404 2.0E-13 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00943 Copper-transporting ATPase signature 581 596 2.0E-13 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00943 Copper-transporting ATPase signature 217 237 2.0E-13 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00943 Copper-transporting ATPase signature 314 333 2.0E-13 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00943 Copper-transporting ATPase signature 773 790 2.0E-13 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF55008 65 125 8.77E-7 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP0758 a262469eab8b2617737a79f699df583e 911 Gene3D G3DSA:2.70.150.10 329 496 2.4E-30 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VP0758 a262469eab8b2617737a79f699df583e 911 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 600 606 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site VP0758 a262469eab8b2617737a79f699df583e 911 SUPERFAMILY SSF55008 167 240 1.06E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 819 831 1.3E-27 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 732 1.3E-27 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 796 815 1.3E-27 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 743 753 1.3E-27 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 612 1.3E-27 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 446 460 1.3E-27 T 22-04-2016 VP0758 a262469eab8b2617737a79f699df583e 911 Gene3D G3DSA:3.40.1110.10 618 723 2.4E-21 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PANTHER PTHR22912:SF106 2 455 1.9E-251 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 Gene3D G3DSA:3.50.50.60 6 142 8.6E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 8 455 2.6E-215 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 SUPERFAMILY SSF51905 4 369 5.61E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 Gene3D G3DSA:3.30.390.30 331 455 2.1E-41 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 8.1E-64 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 323 1.3E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 SUPERFAMILY SSF55424 341 455 4.47E-35 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PANTHER PTHR22912 2 455 1.9E-251 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PIRSF PIRSF000350 2 449 8.0E-83 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 Gene3D G3DSA:3.50.50.60 143 330 2.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 5.3E-29 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 5.3E-29 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 5.3E-29 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 5.3E-29 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 5.3E-29 T 22-04-2016 VP0068 0e2f900f7babc3c42b37322959e8aa08 455 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 454 6.7E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VP2582 9f343ef5df2f2ccfeefb8aa7a3129226 86 Gene3D G3DSA:1.10.150.250 3 83 1.7E-29 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VP2582 9f343ef5df2f2ccfeefb8aa7a3129226 86 PANTHER PTHR12469 5 62 8.2E-25 T 22-04-2016 VP2582 9f343ef5df2f2ccfeefb8aa7a3129226 86 SUPERFAMILY SSF109910 2 79 4.84E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VP2582 9f343ef5df2f2ccfeefb8aa7a3129226 86 PANTHER PTHR12469:SF3 5 62 8.2E-25 T 22-04-2016 VP2582 9f343ef5df2f2ccfeefb8aa7a3129226 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 1.3E-24 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VP2986 47b95659dc49afbc63831932d6ecf8e2 104 SUPERFAMILY SSF55387 1 103 6.63E-39 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VP2986 47b95659dc49afbc63831932d6ecf8e2 104 PANTHER PTHR16821 1 103 2.1E-36 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VP2986 47b95659dc49afbc63831932d6ecf8e2 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 22-04-2016 IPR020895 Frataxin conserved site VP2986 47b95659dc49afbc63831932d6ecf8e2 104 Gene3D G3DSA:3.30.920.10 1 103 1.7E-34 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VP2986 47b95659dc49afbc63831932d6ecf8e2 104 Pfam PF01491 Frataxin-like domain 1 100 5.6E-30 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VP2986 47b95659dc49afbc63831932d6ecf8e2 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.46 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VP2986 47b95659dc49afbc63831932d6ecf8e2 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 1.6E-42 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VP2986 47b95659dc49afbc63831932d6ecf8e2 104 SMART SM01219 1 104 4.5E-55 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 PANTHER PTHR11911:SF99 1 422 3.6E-103 T 22-04-2016 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 Gene3D G3DSA:1.10.357.20 279 451 6.0E-48 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 SMART SM00924 36 139 1.0E-36 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 Pfam PF01769 Divalent cation transporter 323 445 4.1E-22 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 Gene3D G3DSA:1.25.60.10 9 130 9.0E-29 T 22-04-2016 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 SUPERFAMILY SSF54631 138 278 7.58E-27 T 22-04-2016 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 Pfam PF03448 MgtE intracellular N domain 36 137 6.7E-27 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 SMART SM00116 212 258 0.0014 T 22-04-2016 IPR000644 CBS domain VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 Gene3D G3DSA:3.10.580.10 131 262 1.2E-15 T 22-04-2016 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 SUPERFAMILY SSF158791 12 136 3.01E-30 T 22-04-2016 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 Pfam PF00571 CBS domain 140 195 7.1E-4 T 22-04-2016 IPR000644 CBS domain VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 Pfam PF00571 CBS domain 214 257 7.3E-5 T 22-04-2016 IPR000644 CBS domain VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 2.9E-87 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 SUPERFAMILY SSF161093 280 450 3.53E-44 T 22-04-2016 VP2675 cd7fb37014549de907c3112b0ad5c7ff 451 PANTHER PTHR11911 1 422 3.6E-103 T 22-04-2016 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 PANTHER PTHR24423:SF474 8 339 1.5E-109 T 22-04-2016 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 8.41E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 8.41E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 8.41E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 8.41E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF55874 177 336 3.54E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 SMART SM00387 231 337 5.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:3.30.565.10 192 336 5.0E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF47384 111 188 2.94E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 PANTHER PTHR24423 8 339 1.5E-109 T 22-04-2016 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF13188 PAS domain 18 72 4.1E-6 T 22-04-2016 IPR000014 PAS domain VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 336 3.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:1.10.287.130 118 184 2.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:3.30.450.20 14 117 1.1E-6 T 22-04-2016 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 SMART SM00388 122 188 1.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF55785 18 85 2.62E-6 T 22-04-2016 IPR000014 PAS domain VP2252 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 1.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 Gene3D G3DSA:3.40.1280.10 1 160 2.1E-68 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 PIRSF PIRSF000386 1 246 8.9E-101 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.7E-70 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 SUPERFAMILY SSF75217 1 245 2.09E-102 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 Gene3D G3DSA:1.10.1270.20 163 244 2.9E-35 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 PANTHER PTHR32125 1 228 6.2E-120 T 22-04-2016 VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 PANTHER PTHR32125:SF1 1 228 6.2E-120 T 22-04-2016 VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.9 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VP2531 5ec8eeacaae861cc2988db23d3c7136b 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 2.3E-109 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 Gene3D G3DSA:1.20.272.10 207 319 1.5E-19 T 22-04-2016 VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 206 314 4.2E-20 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 198 1.4E-64 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 Pfam PF13177 DNA polymerase III, delta subunit 11 164 2.7E-44 T 22-04-2016 VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 SUPERFAMILY SSF52540 2 179 1.26E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 SUPERFAMILY SSF48019 208 319 7.14E-14 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 PANTHER PTHR11669:SF8 11 260 2.8E-54 T 22-04-2016 VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 PANTHER PTHR11669 11 260 2.8E-54 T 22-04-2016 VP2048 7a9d9e4b34001e0385d6402efc610c1a 320 Gene3D G3DSA:3.40.50.300 2 165 1.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0612 50f479814dde62ef9608a781a9215e8b 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 3.3E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 8.6E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 SMART SM00382 208 355 0.11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0612 50f479814dde62ef9608a781a9215e8b 498 SMART SM00382 1 174 3.5 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0612 50f479814dde62ef9608a781a9215e8b 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.7E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.215 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 PANTHER PTHR11649 1 468 1.1E-160 T 22-04-2016 VP0612 50f479814dde62ef9608a781a9215e8b 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 SUPERFAMILY SSF52540 207 471 4.78E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0612 50f479814dde62ef9608a781a9215e8b 498 SUPERFAMILY SSF52540 141 170 4.78E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0612 50f479814dde62ef9608a781a9215e8b 498 PANTHER PTHR11649:SF5 1 468 1.1E-160 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 Gene3D G3DSA:3.40.50.300 204 390 3.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0612 50f479814dde62ef9608a781a9215e8b 498 Gene3D G3DSA:3.40.50.300 3 161 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0612 50f479814dde62ef9608a781a9215e8b 498 Gene3D G3DSA:3.30.300.20 391 467 3.9E-23 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VP0612 50f479814dde62ef9608a781a9215e8b 498 PIRSF PIRSF006485 1 473 2.6E-179 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 SUPERFAMILY SSF52540 4 164 7.29E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0612 50f479814dde62ef9608a781a9215e8b 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 4.9E-178 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VP0612 50f479814dde62ef9608a781a9215e8b 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 2.3E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like VP2275 e0b93b897e1b0a8faa574a025af5c273 156 Pfam PF00578 AhpC/TSA family 7 134 1.5E-35 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VP2275 e0b93b897e1b0a8faa574a025af5c273 156 Gene3D G3DSA:3.40.30.10 2 154 3.9E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2275 e0b93b897e1b0a8faa574a025af5c273 156 PANTHER PTHR10681 1 136 3.6E-48 T 22-04-2016 VP2275 e0b93b897e1b0a8faa574a025af5c273 156 PIRSF PIRSF000239 1 147 3.3E-18 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 VP2275 e0b93b897e1b0a8faa574a025af5c273 156 SUPERFAMILY SSF52833 4 154 6.84E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 Gene3D G3DSA:1.10.357.10 3 206 1.9E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 PANTHER PTHR30055:SF73 4 174 1.3E-43 T 22-04-2016 VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 PANTHER PTHR30055 4 174 1.3E-43 T 22-04-2016 VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 SUPERFAMILY SSF46689 3 75 1.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 SUPERFAMILY SSF48498 80 207 6.23E-40 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VP1229 b2b789bbc50a684f75cd6e23e1842e50 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 5.5E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP0678 8b6e2d56a80c13dffcbefc58a0bb340e 149 PANTHER PTHR30455 2 149 3.3E-75 T 22-04-2016 VP0678 8b6e2d56a80c13dffcbefc58a0bb340e 149 Pfam PF03477 ATP cone domain 50 136 2.2E-17 T 22-04-2016 IPR005144 ATP-cone domain VP0678 8b6e2d56a80c13dffcbefc58a0bb340e 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.9E-73 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VP0678 8b6e2d56a80c13dffcbefc58a0bb340e 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.329 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VP0678 8b6e2d56a80c13dffcbefc58a0bb340e 149 PANTHER PTHR30455:SF2 2 149 3.3E-75 T 22-04-2016 VP1061 5e5d49f6725900b73d817a85124eb5b9 174 Gene3D G3DSA:3.30.1330.60 62 173 2.5E-34 T 22-04-2016 IPR006665 OmpA-like domain VP1061 5e5d49f6725900b73d817a85124eb5b9 174 Pfam PF00691 OmpA family 73 168 5.3E-23 T 22-04-2016 IPR006665 OmpA-like domain VP1061 5e5d49f6725900b73d817a85124eb5b9 174 PANTHER PTHR30128 42 174 6.2E-56 T 22-04-2016 VP1061 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 74 96 9.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1061 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 104 119 9.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1061 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 119 135 9.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1061 5e5d49f6725900b73d817a85124eb5b9 174 SUPERFAMILY SSF103088 57 173 9.03E-34 T 22-04-2016 IPR006665 OmpA-like domain VP1061 5e5d49f6725900b73d817a85124eb5b9 174 PANTHER PTHR30128:SF18 42 174 6.2E-56 T 22-04-2016 VP1061 5e5d49f6725900b73d817a85124eb5b9 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VP1061 5e5d49f6725900b73d817a85124eb5b9 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 174 2.5E-44 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 SMART SM00495 526 571 1.5 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 SMART SM00495 436 478 1.2E-17 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 PANTHER PTHR22595 34 358 2.9E-148 T 22-04-2016 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 Pfam PF00182 Chitinase class I 106 325 5.0E-30 T 22-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 PANTHER PTHR22595:SF49 34 358 2.9E-148 T 22-04-2016 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 SUPERFAMILY SSF51055 430 479 1.26E-16 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 Pfam PF02839 Carbohydrate binding domain 437 475 1.6E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 SUPERFAMILY SSF53955 87 350 2.05E-53 T 22-04-2016 IPR023346 Lysozyme-like domain VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 Gene3D G3DSA:1.10.530.10 211 349 1.2E-54 T 22-04-2016 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 Gene3D G3DSA:1.10.530.10 87 154 1.2E-54 T 22-04-2016 VP0619 3dddfc3269184fb4470bb7e0d69ec653 574 Gene3D G3DSA:2.10.10.20 433 479 2.2E-20 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 PANTHER PTHR30126:SF11 5 294 2.2E-90 T 22-04-2016 VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 Pfam PF03466 LysR substrate binding domain 90 294 9.3E-50 T 22-04-2016 IPR005119 LysR, substrate-binding VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 Gene3D G3DSA:1.10.10.10 5 86 4.5E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 SUPERFAMILY SSF46785 5 114 4.42E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 SUPERFAMILY SSF53850 92 296 6.52E-44 T 22-04-2016 VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 PANTHER PTHR30126 5 294 2.2E-90 T 22-04-2016 VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 Gene3D G3DSA:3.40.190.10 92 176 3.5E-15 T 22-04-2016 VP2378 aafff50b9405a120d5255afb0bb0e0d5 308 Gene3D G3DSA:3.40.190.10 177 261 4.7E-16 T 22-04-2016 VP0427 d5ee8f466d1dc26caef7374b3eccafbc 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.2E-38 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 VP0427 d5ee8f466d1dc26caef7374b3eccafbc 147 PANTHER PTHR38774:SF1 2 147 4.9E-52 T 22-04-2016 VP0427 d5ee8f466d1dc26caef7374b3eccafbc 147 PANTHER PTHR38774 2 147 4.9E-52 T 22-04-2016 VP0948 9c835fc9116c7496a7108d03fe06ae10 1023 Gene3D G3DSA:2.60.40.1080 84 125 4.5E-4 T 22-04-2016 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 PANTHER PTHR23429:SF0 6 496 9.6E-238 T 22-04-2016 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 PANTHER PTHR23429 6 496 9.6E-238 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 Gene3D G3DSA:3.40.50.720 6 191 1.5E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 9.0E-115 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 SUPERFAMILY SSF51735 4 195 1.71E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 SUPERFAMILY SSF55347 182 490 5.89E-113 T 22-04-2016 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 1.0E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 1.0E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 1.0E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 1.0E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 1.0E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 Gene3D G3DSA:3.30.360.10 192 487 4.4E-120 T 22-04-2016 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 PIRSF PIRSF000110 2 490 1.2E-178 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 85.185 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 1.6E-203 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP1710 be6d7fb9c30af27e7db7ea82bd76f664 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 5.3E-65 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VP3066 b9bc59c7bb2be2ab0545aeadcd5c609f 246 PANTHER PTHR30614 6 246 8.9E-82 T 22-04-2016 VP3066 b9bc59c7bb2be2ab0545aeadcd5c609f 246 PANTHER PTHR30614:SF0 6 246 8.9E-82 T 22-04-2016 VP3066 b9bc59c7bb2be2ab0545aeadcd5c609f 246 Gene3D G3DSA:1.10.3720.10 41 241 2.1E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP3066 b9bc59c7bb2be2ab0545aeadcd5c609f 246 SUPERFAMILY SSF161098 41 227 1.18E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP3066 b9bc59c7bb2be2ab0545aeadcd5c609f 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 4.1E-29 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VP3066 b9bc59c7bb2be2ab0545aeadcd5c609f 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 2.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2403 6030006d5e668046d3e4856c4451b552 1032 Gene3D G3DSA:3.20.20.80 321 599 6.5E-93 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP2403 6030006d5e668046d3e4856c4451b552 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 Gene3D G3DSA:2.60.40.320 602 701 2.4E-23 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VP2403 6030006d5e668046d3e4856c4451b552 1032 SUPERFAMILY SSF74650 716 1001 1.67E-88 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VP2403 6030006d5e668046d3e4856c4451b552 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 Pfam PF16353 Domain of unknown function(DUF4981) 616 700 1.0E-14 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 204 3.3E-48 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 5.2E-17 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VP2403 6030006d5e668046d3e4856c4451b552 1032 PANTHER PTHR10066:SF72 2 552 0.0 T 22-04-2016 VP2403 6030006d5e668046d3e4856c4451b552 1032 PANTHER PTHR10066:SF72 570 1003 0.0 T 22-04-2016 VP2403 6030006d5e668046d3e4856c4451b552 1032 Gene3D G3DSA:2.70.98.10 715 1000 6.0E-91 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VP2403 6030006d5e668046d3e4856c4451b552 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 8.1E-115 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 PANTHER PTHR10066 2 552 0.0 T 22-04-2016 VP2403 6030006d5e668046d3e4856c4451b552 1032 SUPERFAMILY SSF49785 2 206 4.82E-62 T 22-04-2016 IPR008979 Galactose-binding domain-like VP2403 6030006d5e668046d3e4856c4451b552 1032 SUPERFAMILY SSF51445 321 599 8.92E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP2403 6030006d5e668046d3e4856c4451b552 1032 SMART SM01038 728 999 3.8E-129 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2403 6030006d5e668046d3e4856c4451b552 1032 Gene3D G3DSA:2.60.40.320 196 319 3.6E-32 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VP2403 6030006d5e668046d3e4856c4451b552 1032 SUPERFAMILY SSF49303 613 706 1.8E-20 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VP2403 6030006d5e668046d3e4856c4451b552 1032 PANTHER PTHR10066 570 1003 0.0 T 22-04-2016 VP2403 6030006d5e668046d3e4856c4451b552 1032 SUPERFAMILY SSF49303 209 319 8.43E-24 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VP2403 6030006d5e668046d3e4856c4451b552 1032 Gene3D G3DSA:2.60.120.260 2 195 9.9E-73 T 22-04-2016 IPR008979 Galactose-binding domain-like VP2403 6030006d5e668046d3e4856c4451b552 1032 Pfam PF02929 Beta galactosidase small chain 730 998 1.1E-70 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 PANTHER PTHR18934 3 427 3.0E-138 T 22-04-2016 VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 Pfam PF04408 Helicase associated domain (HA2) 388 447 1.4E-8 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 SMART SM00847 387 477 2.6E-7 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 SMART SM00487 5 186 1.0E-13 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 Pfam PF00271 Helicase conserved C-terminal domain 206 326 3.5E-14 T 22-04-2016 IPR001650 Helicase, C-terminal VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 PIRSF PIRSF005496 1 820 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 Gene3D G3DSA:3.40.50.300 201 341 2.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 SUPERFAMILY SSF52540 12 466 7.34E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 8.4E-53 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 SMART SM00490 226 327 2.7E-18 T 22-04-2016 IPR001650 Helicase, C-terminal VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 Gene3D G3DSA:3.40.50.300 3 160 2.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2498 a2bc7e83cf540dc7c7b642dbed18c690 822 Pfam PF00270 DEAD/DEAH box helicase 11 163 3.0E-9 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 SUPERFAMILY SSF54211 238 493 9.86E-100 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PIRSF PIRSF002583 1 634 5.1E-213 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PANTHER PTHR11528:SF44 2 634 0.0 T 22-04-2016 VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PANTHER PTHR11528 2 634 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 Pfam PF00183 Hsp90 protein 227 632 2.8E-127 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 SMART SM00387 32 189 6.9E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 SUPERFAMILY SSF55874 10 215 5.11E-63 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.373 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 4.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 Gene3D G3DSA:3.30.565.10 10 246 3.7E-81 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0821 f9961ffdcee1212b287d7de5c3d40bfa 634 SUPERFAMILY SSF110942 520 632 7.98E-34 T 22-04-2016 VP0777 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF13861 FlgD Tudor-like domain 93 229 2.8E-15 T 22-04-2016 IPR025963 FlgD Tudor-like domain VP0777 b9450fee049d80b2fa1cc0a2db82576c 235 PANTHER PTHR30435:SF15 15 224 1.8E-59 T 22-04-2016 VP0777 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF13860 FlgD Ig-like domain 115 184 2.5E-19 T 22-04-2016 IPR025965 FlgD Ig-like domain VP0777 b9450fee049d80b2fa1cc0a2db82576c 235 PANTHER PTHR30435 15 224 1.8E-59 T 22-04-2016 VP0777 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 1.3E-21 T 22-04-2016 IPR005648 Flagellar hook capping protein VP0794 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF47831 24 143 8.37E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0794 d70006c77e22cff23918ff45172fa9b5 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.1E-246 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VP0794 d70006c77e22cff23918ff45172fa9b5 574 PIRSF PIRSF000732 1 574 3.4E-218 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VP0794 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.8E-32 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0794 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 6.9E-30 T 22-04-2016 VP0794 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 6.9E-30 T 22-04-2016 VP0794 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 6.9E-30 T 22-04-2016 VP0794 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 6.9E-30 T 22-04-2016 VP0794 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 2.3E-124 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VP0794 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF51621 249 549 3.14E-109 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0794 d70006c77e22cff23918ff45172fa9b5 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VP0794 d70006c77e22cff23918ff45172fa9b5 574 PANTHER PTHR22931 66 550 1.9E-213 T 22-04-2016 VP0794 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:1.10.274.10 23 132 2.1E-37 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0794 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF52009 125 243 1.31E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP0794 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:3.20.20.60 255 571 1.8E-113 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0794 d70006c77e22cff23918ff45172fa9b5 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VP0794 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.0E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP0794 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:3.50.30.10 133 254 2.9E-38 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP2594 a0a039387c83674ea0e1c5d861cc2d92 230 Pfam PF04402 Protein of unknown function (DUF541) 29 227 1.9E-41 T 22-04-2016 IPR007497 Protein of unknown function DUF541 VP2594 a0a039387c83674ea0e1c5d861cc2d92 230 PANTHER PTHR34387:SF1 7 230 5.2E-54 T 22-04-2016 VP2594 a0a039387c83674ea0e1c5d861cc2d92 230 PANTHER PTHR34387 7 230 5.2E-54 T 22-04-2016 VP0274 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.230.10 78 159 1.4E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0274 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.160.20 10 73 1.6E-30 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VP0274 66bf604a6395b32ef031fc55bd014857 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 5.9E-29 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP0274 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0274 66bf604a6395b32ef031fc55bd014857 167 PANTHER PTHR13718 10 163 1.0E-79 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 VP0274 66bf604a6395b32ef031fc55bd014857 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.2E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VP0274 66bf604a6395b32ef031fc55bd014857 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site VP0274 66bf604a6395b32ef031fc55bd014857 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.556 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VP0274 66bf604a6395b32ef031fc55bd014857 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.0E-69 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VP0274 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 22-04-2016 VP2943 c530aac4e4da76ad708de03542047c29 449 PANTHER PTHR11206 12 444 5.7E-129 T 22-04-2016 VP2943 c530aac4e4da76ad708de03542047c29 449 Pfam PF01554 MatE 26 186 1.8E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2943 c530aac4e4da76ad708de03542047c29 449 Pfam PF01554 MatE 252 407 1.8E-11 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2943 c530aac4e4da76ad708de03542047c29 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 420 4.8E-74 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2943 c530aac4e4da76ad708de03542047c29 449 PANTHER PTHR11206:SF94 12 444 5.7E-129 T 22-04-2016 VP2246 78c416f069d4360c702facd26e043609 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 2.3E-174 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP2246 78c416f069d4360c702facd26e043609 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 2.4E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP2246 78c416f069d4360c702facd26e043609 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 3.9E-194 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP2246 78c416f069d4360c702facd26e043609 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP2246 78c416f069d4360c702facd26e043609 439 SMART SM00382 158 342 4.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2246 78c416f069d4360c702facd26e043609 439 PANTHER PTHR15184:SF9 23 437 2.6E-227 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP2246 78c416f069d4360c702facd26e043609 439 SUPERFAMILY SSF52540 93 362 5.04E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2246 78c416f069d4360c702facd26e043609 439 Gene3D G3DSA:3.40.50.300 94 359 5.3E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2246 78c416f069d4360c702facd26e043609 439 PANTHER PTHR15184 23 437 2.6E-227 T 22-04-2016 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 PANTHER PTHR22807 5 367 5.9E-219 T 22-04-2016 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 SUPERFAMILY SSF53335 7 308 4.78E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 8.8E-102 T 22-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 PANTHER PTHR22807:SF38 5 367 5.9E-219 T 22-04-2016 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 7.0E-29 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 1.5E-49 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 473 1.1E-9 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 Gene3D G3DSA:3.40.50.150 100 308 1.5E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1612 fa4d543edbeece7616e5cbd70ed2d49a 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 65.857 T 22-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1065 3edfc7edf3ba1b0a402dd20583ff2bdb 138 PANTHER PTHR40043:SF1 4 138 9.9E-35 T 22-04-2016 VP1065 3edfc7edf3ba1b0a402dd20583ff2bdb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 4.4E-12 T 22-04-2016 IPR007140 Protein of unknown function DUF350 VP1065 3edfc7edf3ba1b0a402dd20583ff2bdb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 1.3E-13 T 22-04-2016 IPR007140 Protein of unknown function DUF350 VP1065 3edfc7edf3ba1b0a402dd20583ff2bdb 138 PANTHER PTHR40043 4 138 9.9E-35 T 22-04-2016 VP2068 56dac3a2d966a61d703c4df37c21b76f 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.608 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VP2068 56dac3a2d966a61d703c4df37c21b76f 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 2.8E-99 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VP2068 56dac3a2d966a61d703c4df37c21b76f 358 PANTHER PTHR23264:SF19 1 354 1.5E-160 T 22-04-2016 VP2068 56dac3a2d966a61d703c4df37c21b76f 358 PANTHER PTHR23264 1 354 1.5E-160 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VP2068 56dac3a2d966a61d703c4df37c21b76f 358 Gene3D G3DSA:3.40.50.300 88 337 1.8E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2068 56dac3a2d966a61d703c4df37c21b76f 358 SUPERFAMILY SSF52540 88 319 1.23E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2068 56dac3a2d966a61d703c4df37c21b76f 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 VP2790 1177ffdab21705718a4f9004423e65cb 335 PANTHER PTHR10794:SF46 1 329 4.1E-78 T 22-04-2016 VP2790 1177ffdab21705718a4f9004423e65cb 335 PIRSF PIRSF005211 1 334 4.5E-105 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- VP2790 1177ffdab21705718a4f9004423e65cb 335 Gene3D G3DSA:3.40.50.1820 36 308 3.2E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP2790 1177ffdab21705718a4f9004423e65cb 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- VP2790 1177ffdab21705718a4f9004423e65cb 335 SUPERFAMILY SSF53474 32 299 1.34E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP2790 1177ffdab21705718a4f9004423e65cb 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 4.0E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP2790 1177ffdab21705718a4f9004423e65cb 335 PANTHER PTHR10794 1 329 4.1E-78 T 22-04-2016 VP2571 2b17c497f3976e99250fe3690daf6af2 320 PANTHER PTHR11649:SF3 19 319 3.0E-124 T 22-04-2016 VP2571 2b17c497f3976e99250fe3690daf6af2 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.748 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VP2571 2b17c497f3976e99250fe3690daf6af2 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 188 9.0E-39 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2571 2b17c497f3976e99250fe3690daf6af2 320 Gene3D G3DSA:3.40.50.300 22 211 7.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2571 2b17c497f3976e99250fe3690daf6af2 320 SUPERFAMILY SSF52540 29 224 6.28E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2571 2b17c497f3976e99250fe3690daf6af2 320 PANTHER PTHR11649 19 319 3.0E-124 T 22-04-2016 VP2571 2b17c497f3976e99250fe3690daf6af2 320 Gene3D G3DSA:3.30.300.20 212 313 1.8E-39 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VP2571 2b17c497f3976e99250fe3690daf6af2 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 3.7E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP2571 2b17c497f3976e99250fe3690daf6af2 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VP2571 2b17c497f3976e99250fe3690daf6af2 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 4.8E-110 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VP2571 2b17c497f3976e99250fe3690daf6af2 320 SUPERFAMILY SSF54814 200 316 2.35E-41 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VP0492 5a1d8f288f45c860a2d9f72c5e30b43a 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.6E-69 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VP0492 5a1d8f288f45c860a2d9f72c5e30b43a 160 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 3.6E-41 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VP0492 5a1d8f288f45c860a2d9f72c5e30b43a 160 PANTHER PTHR33254:SF1 5 160 1.0E-81 T 22-04-2016 VP0492 5a1d8f288f45c860a2d9f72c5e30b43a 160 Gene3D G3DSA:3.50.30.40 5 157 3.3E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VP0492 5a1d8f288f45c860a2d9f72c5e30b43a 160 SUPERFAMILY SSF89562 1 158 1.12E-47 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VP0492 5a1d8f288f45c860a2d9f72c5e30b43a 160 PANTHER PTHR33254 5 160 1.0E-81 T 22-04-2016 VP0328 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 6.5E-40 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VP0328 f8e2fa0ab0d904fabfdeaf7445fc8729 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0328 f8e2fa0ab0d904fabfdeaf7445fc8729 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VP0328 f8e2fa0ab0d904fabfdeaf7445fc8729 103 PANTHER PTHR21349 1 101 6.0E-48 T 22-04-2016 VP0328 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.361 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0328 f8e2fa0ab0d904fabfdeaf7445fc8729 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2836 7fa0611dbdedd6c8533eec8efbe97614 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP2836 7fa0611dbdedd6c8533eec8efbe97614 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP2836 7fa0611dbdedd6c8533eec8efbe97614 211 PANTHER PTHR30055:SF30 1 194 7.8E-58 T 22-04-2016 VP2836 7fa0611dbdedd6c8533eec8efbe97614 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 1.5E-43 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR VP2836 7fa0611dbdedd6c8533eec8efbe97614 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.4E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VP2836 7fa0611dbdedd6c8533eec8efbe97614 211 PANTHER PTHR30055 1 194 7.8E-58 T 22-04-2016 VP2836 7fa0611dbdedd6c8533eec8efbe97614 211 Gene3D G3DSA:1.10.357.10 2 181 4.8E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VP2836 7fa0611dbdedd6c8533eec8efbe97614 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 SUPERFAMILY SSF53383 9 381 1.85E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 PANTHER PTHR11808:SF15 7 386 7.5E-178 T 22-04-2016 VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 6.0E-137 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 Gene3D G3DSA:3.90.1150.10 250 384 3.8E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 PIRSF PIRSF001434 1 385 1.6E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 Gene3D G3DSA:3.40.640.10 5 247 2.0E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 PANTHER PTHR11808 7 386 7.5E-178 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP2765 efaf87a5c1a9c74a5fbb194bfdf9d862 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 7.1E-202 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 VP0459 53bdb271ad4b661972b10e636b32399f 398 PANTHER PTHR30474:SF2 3 398 1.9E-178 T 22-04-2016 VP0459 53bdb271ad4b661972b10e636b32399f 398 Pfam PF01098 Cell cycle protein 26 381 1.2E-113 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VP0459 53bdb271ad4b661972b10e636b32399f 398 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 22 390 41.489 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VP0459 53bdb271ad4b661972b10e636b32399f 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 7.4E-129 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VP0459 53bdb271ad4b661972b10e636b32399f 398 PANTHER PTHR30474 3 398 1.9E-178 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VP0459 53bdb271ad4b661972b10e636b32399f 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VP1879 25bddb62c860257c1477f2e205a606ab 417 PANTHER PTHR32195:SF19 1 417 8.3E-190 T 22-04-2016 VP1879 25bddb62c860257c1477f2e205a606ab 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 383 1.5E-17 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VP1879 25bddb62c860257c1477f2e205a606ab 417 PANTHER PTHR32195 1 417 8.3E-190 T 22-04-2016 VP1678 d9e1b4f2d22a0c5f877d05206611bd62 312 SUPERFAMILY SSF53474 177 206 1.54E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1678 d9e1b4f2d22a0c5f877d05206611bd62 312 SUPERFAMILY SSF53474 3 143 1.54E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1678 d9e1b4f2d22a0c5f877d05206611bd62 312 SUPERFAMILY SSF53474 233 312 1.54E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1678 d9e1b4f2d22a0c5f877d05206611bd62 312 Gene3D G3DSA:3.40.50.1820 4 312 9.4E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1678 d9e1b4f2d22a0c5f877d05206611bd62 312 PANTHER PTHR17630 1 312 3.0E-46 T 22-04-2016 VP1678 d9e1b4f2d22a0c5f877d05206611bd62 312 PANTHER PTHR17630:SF49 1 312 3.0E-46 T 22-04-2016 VP1678 d9e1b4f2d22a0c5f877d05206611bd62 312 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 151 1.7E-7 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 VP1248 0df68d36ff968d2603f084a59560eb5b 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 269.393 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VP1248 0df68d36ff968d2603f084a59560eb5b 443 SUPERFAMILY SSF53686 74 430 1.92E-56 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP1248 0df68d36ff968d2603f084a59560eb5b 443 PANTHER PTHR10314 155 441 6.7E-203 T 22-04-2016 VP1248 0df68d36ff968d2603f084a59560eb5b 443 PANTHER PTHR10314 44 131 6.7E-203 T 22-04-2016 VP1248 0df68d36ff968d2603f084a59560eb5b 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VP1248 0df68d36ff968d2603f084a59560eb5b 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 436 2.5E-217 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VP1248 0df68d36ff968d2603f084a59560eb5b 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 77 402 1.2E-55 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP1248 0df68d36ff968d2603f084a59560eb5b 443 Gene3D G3DSA:3.40.50.1100 180 432 7.4E-45 T 22-04-2016 VP1248 0df68d36ff968d2603f084a59560eb5b 443 PANTHER PTHR10314:SF9 155 441 6.7E-203 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VP1248 0df68d36ff968d2603f084a59560eb5b 443 PANTHER PTHR10314:SF9 44 131 6.7E-203 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VP1756 79a845a11230ad37cfbd7a2ca9c5a80e 159 SUPERFAMILY SSF53850 41 155 1.41E-5 T 22-04-2016 VP0094 cb30657b7047c56ddb4e3d363daf2b9e 514 Pfam PF02646 RmuC family 181 477 7.5E-107 T 22-04-2016 IPR003798 DNA recombination RmuC VP0094 cb30657b7047c56ddb4e3d363daf2b9e 514 PANTHER PTHR30563 1 511 1.5E-134 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF100934 534 607 3.84E-6 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VP0653 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.30.30 53 106 1.2E-28 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 PANTHER PTHR19375:SF173 2 636 0.0 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF53067 186 381 1.23E-65 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.238 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VP0653 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:2.60.34.10 389 530 1.3E-70 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VP0653 7a8cffd2c9328466202187db658b4df9 637 PANTHER PTHR19375 2 636 0.0 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VP0653 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF53067 1 182 1.17E-64 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.5E-285 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VP0653 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 195 228 5.9E-32 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 318 359 5.9E-32 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 118 194 1.4E-63 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 4 52 1.4E-63 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VP0653 7a8cffd2c9328466202187db658b4df9 637 Pfam PF00012 Hsp70 protein 4 601 1.4E-261 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VP0653 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.90.640.10 229 314 9.5E-32 T 22-04-2016 VP0653 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VP0653 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:1.20.1270.10 531 600 7.8E-26 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VP0653 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF100920 383 539 3.79E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 Gene3D G3DSA:1.10.1660.10 58 132 3.8E-25 T 22-04-2016 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.4E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 SMART SM00422 2 71 4.1E-30 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 7.3E-70 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 Gene3D G3DSA:1.10.1660.10 1 57 1.8E-27 T 22-04-2016 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 PANTHER PTHR30204:SF18 1 132 1.9E-53 T 22-04-2016 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 PANTHER PTHR30204 1 132 1.9E-53 T 22-04-2016 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VP2894 8e11ba72fe295aeeb4fe400453b4c464 132 SUPERFAMILY SSF46955 2 121 4.76E-34 T 22-04-2016 IPR009061 Putative DNA-binding domain VP0744 781d93368cfed43780c331c23765988f 285 PANTHER PTHR18895:SF64 8 280 1.1E-111 T 22-04-2016 VP0744 781d93368cfed43780c331c23765988f 285 Gene3D G3DSA:3.40.50.150 92 280 4.5E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0744 781d93368cfed43780c331c23765988f 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 9.1E-94 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VP0744 781d93368cfed43780c331c23765988f 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 283 4.3E-81 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VP0744 781d93368cfed43780c331c23765988f 285 Pfam PF13847 Methyltransferase domain 117 247 1.1E-18 T 22-04-2016 IPR025714 Methyltransferase domain VP0744 781d93368cfed43780c331c23765988f 285 Gene3D G3DSA:1.10.8.10 6 90 1.6E-32 T 22-04-2016 VP0744 781d93368cfed43780c331c23765988f 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 46.179 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VP0744 781d93368cfed43780c331c23765988f 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP0744 781d93368cfed43780c331c23765988f 285 SUPERFAMILY SSF53335 7 279 7.63E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0744 781d93368cfed43780c331c23765988f 285 PANTHER PTHR18895 8 280 1.1E-111 T 22-04-2016 VP1123 a2cf5f612a263605054ea8d90a1d179f 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 6.1E-80 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1123 a2cf5f612a263605054ea8d90a1d179f 418 PIRSF PIRSF003085 24 418 1.6E-121 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VP1123 a2cf5f612a263605054ea8d90a1d179f 418 PANTHER PTHR10108 73 331 2.9E-113 T 22-04-2016 VP1123 a2cf5f612a263605054ea8d90a1d179f 418 PANTHER PTHR10108 349 418 2.9E-113 T 22-04-2016 VP1123 a2cf5f612a263605054ea8d90a1d179f 418 Gene3D G3DSA:3.40.50.150 139 417 2.5E-97 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1123 a2cf5f612a263605054ea8d90a1d179f 418 SUPERFAMILY SSF53335 21 371 2.87E-90 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1123 a2cf5f612a263605054ea8d90a1d179f 418 PANTHER PTHR10108:SF795 73 331 2.9E-113 T 22-04-2016 VP1123 a2cf5f612a263605054ea8d90a1d179f 418 PANTHER PTHR10108:SF795 349 418 2.9E-113 T 22-04-2016 VP3010 4cdb968cf5d87351230815381278b44a 219 PANTHER PTHR30086:SF13 2 218 2.1E-89 T 22-04-2016 VP3010 4cdb968cf5d87351230815381278b44a 219 PIRSF PIRSF006324 1 214 7.2E-49 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP3010 4cdb968cf5d87351230815381278b44a 219 PANTHER PTHR30086 2 218 2.1E-89 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP3010 4cdb968cf5d87351230815381278b44a 219 Pfam PF01810 LysE type translocator 16 212 6.3E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP0341 c275694ccb3f6cb2fc49eaa80d5c5cc5 260 PANTHER PTHR23054:SF21 74 240 3.9E-30 T 22-04-2016 VP0341 c275694ccb3f6cb2fc49eaa80d5c5cc5 260 Pfam PF04784 Protein of unknown function, DUF547 89 198 2.5E-26 T 22-04-2016 IPR006869 Domain of unknown function DUF547 VP0341 c275694ccb3f6cb2fc49eaa80d5c5cc5 260 PANTHER PTHR23054 74 240 3.9E-30 T 22-04-2016 VP2218 83aa079d1cec788f24f79ef398e9008a 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 4.0E-257 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PANTHER PTHR30009:SF0 1 418 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PANTHER PTHR30009:SF0 470 657 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 Pfam PF01578 Cytochrome C assembly protein 89 297 4.0E-54 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PANTHER PTHR30009 1 418 0.0 T 22-04-2016 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PANTHER PTHR30009 470 657 0.0 T 22-04-2016 VP2218 83aa079d1cec788f24f79ef398e9008a 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 6.0E-127 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2218 83aa079d1cec788f24f79ef398e9008a 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1533 c12f2f12aaf44d6a730f9b0be444291c 297 Gene3D G3DSA:3.40.50.620 21 205 1.2E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1533 c12f2f12aaf44d6a730f9b0be444291c 297 PANTHER PTHR11807 7 280 4.8E-109 T 22-04-2016 VP1533 c12f2f12aaf44d6a730f9b0be444291c 297 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 8 269 56.371 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VP1533 c12f2f12aaf44d6a730f9b0be444291c 297 SUPERFAMILY SSF52402 15 233 7.68E-54 T 22-04-2016 VP1533 c12f2f12aaf44d6a730f9b0be444291c 297 PANTHER PTHR11807:SF16 7 280 4.8E-109 T 22-04-2016 VP1533 c12f2f12aaf44d6a730f9b0be444291c 297 PIRSF PIRSF004976 2 282 2.9E-70 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VP1533 c12f2f12aaf44d6a730f9b0be444291c 297 Pfam PF01171 PP-loop family 41 203 4.3E-16 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VP2049 af7c8f4da6158a4a3bce4dc9faef85a7 210 SUPERFAMILY SSF52540 2 209 2.28E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2049 af7c8f4da6158a4a3bce4dc9faef85a7 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VP2049 af7c8f4da6158a4a3bce4dc9faef85a7 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.828 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VP2049 af7c8f4da6158a4a3bce4dc9faef85a7 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 6.9E-63 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VP2049 af7c8f4da6158a4a3bce4dc9faef85a7 210 PANTHER PTHR10344 1 209 3.1E-69 T 22-04-2016 VP2049 af7c8f4da6158a4a3bce4dc9faef85a7 210 Pfam PF02223 Thymidylate kinase 9 199 1.6E-58 T 22-04-2016 VP2049 af7c8f4da6158a4a3bce4dc9faef85a7 210 Gene3D G3DSA:3.40.50.300 6 208 5.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0462 ba836bb858ddff8bcf7baba18e76deb8 260 PANTHER PTHR35851 4 260 1.2E-64 T 22-04-2016 VP0462 ba836bb858ddff8bcf7baba18e76deb8 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.495 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 VP0462 ba836bb858ddff8bcf7baba18e76deb8 260 Pfam PF03799 Cell division protein FtsQ 127 239 2.3E-24 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB VP0462 ba836bb858ddff8bcf7baba18e76deb8 260 Pfam PF08478 POTRA domain, FtsQ-type 54 123 3.1E-17 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type VP0462 ba836bb858ddff8bcf7baba18e76deb8 260 PANTHER PTHR35851:SF1 4 260 1.2E-64 T 22-04-2016 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 SUPERFAMILY SSF46689 354 444 8.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 Gene3D G3DSA:1.10.10.60 399 443 8.7E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 SUPERFAMILY SSF52540 142 379 1.36E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0080 8bd9aca101b1cdaebd39175716814eb2 447 PANTHER PTHR32071 28 444 6.8E-135 T 22-04-2016 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.2E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 Pfam PF00158 Sigma-54 interaction domain 142 308 2.4E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 SUPERFAMILY SSF52172 37 185 3.47E-10 T 22-04-2016 IPR011006 CheY-like superfamily VP0080 8bd9aca101b1cdaebd39175716814eb2 447 Gene3D G3DSA:3.40.50.2300 12 126 6.7E-4 T 22-04-2016 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP0080 8bd9aca101b1cdaebd39175716814eb2 447 SMART SM00382 162 305 3.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0080 8bd9aca101b1cdaebd39175716814eb2 447 Gene3D G3DSA:3.40.50.300 139 314 1.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0080 8bd9aca101b1cdaebd39175716814eb2 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.5E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.5E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0080 8bd9aca101b1cdaebd39175716814eb2 447 Gene3D G3DSA:1.10.8.60 315 382 2.0E-18 T 22-04-2016 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 Gene3D G3DSA:2.60.40.1080 97 179 4.8E-9 T 22-04-2016 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 Gene3D G3DSA:2.60.40.1080 273 351 4.1E-4 T 22-04-2016 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 Gene3D G3DSA:2.60.40.1080 442 523 4.0E-7 T 22-04-2016 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 SMART SM00635 355 435 1.2E-9 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 SMART SM00635 183 264 1.2 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 SMART SM00635 97 178 6.7E-8 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 SMART SM00635 270 349 0.025 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 SMART SM00635 441 522 1.0E-6 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 SUPERFAMILY SSF49373 97 179 1.41E-6 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 444 518 3.9E-5 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 357 427 9.2E-7 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VP1767 67b6e2f3e06a05a6456c531a06cc80f8 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 98 164 1.8E-5 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VP2532 73a97641593688f93041ce8f04c04469 182 Gene3D G3DSA:2.30.30.240 106 182 3.2E-29 T 22-04-2016 VP2532 73a97641593688f93041ce8f04c04469 182 SUPERFAMILY SSF50346 106 182 1.02E-19 T 22-04-2016 IPR011033 PRC-barrel-like VP2532 73a97641593688f93041ce8f04c04469 182 PANTHER PTHR33692:SF1 9 180 9.0E-60 T 22-04-2016 VP2532 73a97641593688f93041ce8f04c04469 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 7.3E-55 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VP2532 73a97641593688f93041ce8f04c04469 182 Pfam PF01782 RimM N-terminal domain 15 95 8.4E-25 T 22-04-2016 IPR002676 RimM protein GO:0006364 VP2532 73a97641593688f93041ce8f04c04469 182 SUPERFAMILY SSF50447 13 100 9.18E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2532 73a97641593688f93041ce8f04c04469 182 PANTHER PTHR33692 9 180 9.0E-60 T 22-04-2016 VP2532 73a97641593688f93041ce8f04c04469 182 Gene3D G3DSA:2.40.30.60 7 100 7.9E-33 T 22-04-2016 IPR002676 RimM protein GO:0006364 VP2532 73a97641593688f93041ce8f04c04469 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.604 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VP2532 73a97641593688f93041ce8f04c04469 182 Pfam PF05239 PRC-barrel domain 103 168 5.9E-11 T 22-04-2016 IPR027275 PRC-barrel domain VP3077 9bdc5b1c370c96c2b7181daf008e9df4 293 PANTHER PTHR33375 1 291 3.0E-90 T 22-04-2016 VP3077 9bdc5b1c370c96c2b7181daf008e9df4 293 SUPERFAMILY SSF109709 122 229 4.71E-33 T 22-04-2016 VP3077 9bdc5b1c370c96c2b7181daf008e9df4 293 Gene3D G3DSA:3.90.1530.10 34 136 4.4E-39 T 22-04-2016 VP3077 9bdc5b1c370c96c2b7181daf008e9df4 293 SUPERFAMILY SSF110849 40 132 6.54E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VP3077 9bdc5b1c370c96c2b7181daf008e9df4 293 Pfam PF02195 ParB-like nuclease domain 40 130 1.9E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VP3077 9bdc5b1c370c96c2b7181daf008e9df4 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 213 2.8E-57 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VP3077 9bdc5b1c370c96c2b7181daf008e9df4 293 SMART SM00470 40 130 2.3E-35 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VP1876 5e1f372c48238bd34f470b9a0f36059f 566 Gene3D G3DSA:3.30.565.10 274 430 8.6E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1876 5e1f372c48238bd34f470b9a0f36059f 566 SUPERFAMILY SSF47384 193 269 2.35E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 Gene3D G3DSA:3.40.50.2300 446 565 5.0E-37 T 22-04-2016 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 SUPERFAMILY SSF55874 258 425 3.67E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1876 5e1f372c48238bd34f470b9a0f36059f 566 SMART SM00448 449 560 5.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 SMART SM00387 316 427 6.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1876 5e1f372c48238bd34f470b9a0f36059f 566 Pfam PF00072 Response regulator receiver domain 451 558 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 Gene3D G3DSA:1.10.287.130 196 265 2.6E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 1.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1876 5e1f372c48238bd34f470b9a0f36059f 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 PANTHER PTHR24423 188 566 4.5E-125 T 22-04-2016 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 SMART SM00388 204 269 3.5E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1876 5e1f372c48238bd34f470b9a0f36059f 566 SUPERFAMILY SSF52172 448 565 8.82E-34 T 22-04-2016 IPR011006 CheY-like superfamily VP1876 5e1f372c48238bd34f470b9a0f36059f 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 4.4E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2424 5915746e2e4ce715afe83fbb235d212e 251 Gene3D G3DSA:1.10.10.60 202 250 6.7E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2424 5915746e2e4ce715afe83fbb235d212e 251 SUPERFAMILY SSF46689 201 250 2.96E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2424 5915746e2e4ce715afe83fbb235d212e 251 PANTHER PTHR11019 148 251 6.8E-29 T 22-04-2016 VP2424 5915746e2e4ce715afe83fbb235d212e 251 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 201 244 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VP2424 5915746e2e4ce715afe83fbb235d212e 251 Pfam PF12833 Helix-turn-helix domain 171 250 4.6E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP2424 5915746e2e4ce715afe83fbb235d212e 251 Gene3D G3DSA:1.10.10.60 150 201 7.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2424 5915746e2e4ce715afe83fbb235d212e 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 248 4.9E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP2424 5915746e2e4ce715afe83fbb235d212e 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 232 4.9E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP2424 5915746e2e4ce715afe83fbb235d212e 251 PANTHER PTHR11019:SF11 148 251 6.8E-29 T 22-04-2016 VP2424 5915746e2e4ce715afe83fbb235d212e 251 SUPERFAMILY SSF46689 152 197 1.79E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP2424 5915746e2e4ce715afe83fbb235d212e 251 SMART SM00342 164 248 6.9E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP2084 9a23b130c901c4c2c46b2b744b35698a 424 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 7.1E-65 T 22-04-2016 IPR025105 Domain of unknown function DUF4010 VP2084 9a23b130c901c4c2c46b2b744b35698a 424 Pfam PF02308 MgtC family 16 141 6.3E-19 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VP2084 9a23b130c901c4c2c46b2b744b35698a 424 PANTHER PTHR39084 12 424 5.1E-63 T 22-04-2016 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.5E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 Gene3D G3DSA:1.10.10.10 9 87 2.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 Pfam PF03466 LysR substrate binding domain 96 292 3.1E-20 T 22-04-2016 IPR005119 LysR, substrate-binding VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 Gene3D G3DSA:3.40.190.10 179 260 1.8E-21 T 22-04-2016 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 PANTHER PTHR30537:SF26 5 292 2.7E-63 T 22-04-2016 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 SUPERFAMILY SSF46785 4 117 1.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 Gene3D G3DSA:3.40.190.10 99 178 4.0E-19 T 22-04-2016 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 PANTHER PTHR30537 5 292 2.7E-63 T 22-04-2016 VP0635 14eb6d6cba9f1c8e3fd724d219094fe9 296 SUPERFAMILY SSF53850 96 293 2.17E-24 T 22-04-2016 VP2945 970f31dc1953091b171244b1201e7f08 206 PANTHER PTHR33516:SF2 1 206 5.7E-103 T 22-04-2016 VP2945 970f31dc1953091b171244b1201e7f08 206 Pfam PF00717 Peptidase S24-like 118 183 2.2E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B VP2945 970f31dc1953091b171244b1201e7f08 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.634 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VP2945 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VP2945 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VP2945 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VP2945 970f31dc1953091b171244b1201e7f08 206 SUPERFAMILY SSF51306 79 202 3.49E-36 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VP2945 970f31dc1953091b171244b1201e7f08 206 Pfam PF01726 LexA DNA binding domain 1 65 4.3E-29 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VP2945 970f31dc1953091b171244b1201e7f08 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 5.6E-81 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VP2945 970f31dc1953091b171244b1201e7f08 206 PANTHER PTHR33516 1 206 5.7E-103 T 22-04-2016 VP2945 970f31dc1953091b171244b1201e7f08 206 Gene3D G3DSA:2.10.109.10 80 203 8.1E-45 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VP2945 970f31dc1953091b171244b1201e7f08 206 Gene3D G3DSA:1.10.10.10 1 69 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2945 970f31dc1953091b171244b1201e7f08 206 SUPERFAMILY SSF46785 3 69 3.14E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 PANTHER PTHR11751 3 338 6.6E-96 T 22-04-2016 VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 Pfam PF00155 Aminotransferase class I and II 42 337 1.1E-55 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 8.5E-118 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 PANTHER PTHR11751:SF398 3 338 6.6E-96 T 22-04-2016 VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 SUPERFAMILY SSF53383 10 343 3.58E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 52.938 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 Gene3D G3DSA:3.90.1150.10 251 344 1.3E-10 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VP1139 a3260b1ba2ed15c72dfe94cc7efeed8c 346 Gene3D G3DSA:3.40.640.10 40 250 8.0E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP2561 b91cc1658d562689e07dda0346698ee9 433 Hamap MF_00318 Enolase [eno]. 2 417 44.504 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 Gene3D G3DSA:3.30.390.10 3 127 1.1E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VP2561 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 165 178 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 107 123 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 369 386 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 317 328 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 37 51 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 340 354 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.2E-207 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 Gene3D G3DSA:3.20.20.120 128 429 2.1E-135 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VP2561 b91cc1658d562689e07dda0346698ee9 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 Pfam PF03952 Enolase, N-terminal domain 4 134 3.9E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 SUPERFAMILY SSF54826 3 138 4.52E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VP2561 b91cc1658d562689e07dda0346698ee9 433 PIRSF PIRSF001400 1 431 4.2E-192 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 PANTHER PTHR11902 1 428 6.6E-273 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 SUPERFAMILY SSF51604 143 428 8.06E-127 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VP2561 b91cc1658d562689e07dda0346698ee9 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.2E-137 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 SMART SM01192 143 431 6.4E-214 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2561 b91cc1658d562689e07dda0346698ee9 433 SMART SM01193 4 134 1.6E-92 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP0224 5fd040d8b69cb920cb16c2d959b82488 290 PANTHER PTHR10491:SF4 1 286 1.3E-46 T 22-04-2016 VP0224 5fd040d8b69cb920cb16c2d959b82488 290 SUPERFAMILY SSF51735 1 286 1.57E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0224 5fd040d8b69cb920cb16c2d959b82488 290 Gene3D G3DSA:3.90.25.10 231 275 4.8E-4 T 22-04-2016 VP0224 5fd040d8b69cb920cb16c2d959b82488 290 Gene3D G3DSA:3.40.50.720 1 230 1.7E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0224 5fd040d8b69cb920cb16c2d959b82488 290 Pfam PF04321 RmlD substrate binding domain 3 287 5.9E-36 T 22-04-2016 IPR029903 RmlD-like substrate binding domain VP0224 5fd040d8b69cb920cb16c2d959b82488 290 PANTHER PTHR10491 1 286 1.3E-46 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family VP0093 9d6a88ff047f5ef3b5fa6df98b6e26da 302 SUPERFAMILY SSF103481 189 289 4.32E-10 T 22-04-2016 VP0093 9d6a88ff047f5ef3b5fa6df98b6e26da 302 PANTHER PTHR22911:SF58 1 288 2.1E-161 T 22-04-2016 VP0093 9d6a88ff047f5ef3b5fa6df98b6e26da 302 Pfam PF00892 EamA-like transporter family 9 141 4.2E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VP0093 9d6a88ff047f5ef3b5fa6df98b6e26da 302 Pfam PF00892 EamA-like transporter family 155 286 5.9E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VP0093 9d6a88ff047f5ef3b5fa6df98b6e26da 302 PANTHER PTHR22911 1 288 2.1E-161 T 22-04-2016 VP0093 9d6a88ff047f5ef3b5fa6df98b6e26da 302 SUPERFAMILY SSF103481 65 144 1.12E-11 T 22-04-2016 VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 PANTHER PTHR30445:SF4 3 559 0.0 T 22-04-2016 VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.141 T 22-04-2016 IPR023017 Transport protein YbjL, putative VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 PANTHER PTHR30445 3 559 0.0 T 22-04-2016 VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 Gene3D G3DSA:3.30.70.1450 232 286 5.3E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 SUPERFAMILY SSF116726 231 285 2.75E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 7.3E-28 T 22-04-2016 IPR006512 YidE/YbjL duplication VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 1.7E-37 T 22-04-2016 IPR006512 YidE/YbjL duplication VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.5E-36 T 22-04-2016 IPR006512 YidE/YbjL duplication VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 7.4E-43 T 22-04-2016 IPR006512 YidE/YbjL duplication VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP1232 a732d9fde2d3435ded1e3dcf5f279ed0 560 Gene3D G3DSA:3.30.70.1450 308 377 7.6E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0409 3ac79018c666354bfc04b2233def2be4 271 Pfam PF00561 alpha/beta hydrolase fold 23 254 8.0E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0409 3ac79018c666354bfc04b2233def2be4 271 Gene3D G3DSA:3.40.50.1820 1 267 3.0E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0409 3ac79018c666354bfc04b2233def2be4 271 SUPERFAMILY SSF53474 1 268 1.84E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0409 3ac79018c666354bfc04b2233def2be4 271 PANTHER PTHR10992:SF885 6 268 9.3E-103 T 22-04-2016 VP0409 3ac79018c666354bfc04b2233def2be4 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 5.7E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP0409 3ac79018c666354bfc04b2233def2be4 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 5.7E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP0409 3ac79018c666354bfc04b2233def2be4 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 5.7E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP0409 3ac79018c666354bfc04b2233def2be4 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 1.2E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0409 3ac79018c666354bfc04b2233def2be4 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.2E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0409 3ac79018c666354bfc04b2233def2be4 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.2E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0409 3ac79018c666354bfc04b2233def2be4 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 1.2E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0409 3ac79018c666354bfc04b2233def2be4 271 PANTHER PTHR10992 6 268 9.3E-103 T 22-04-2016 VP2243 d322587f86365bd32cf0bffb1f54e0e2 167 PANTHER PTHR35091:SF1 1 167 6.6E-61 T 22-04-2016 VP2243 d322587f86365bd32cf0bffb1f54e0e2 167 PANTHER PTHR35091 1 167 6.6E-61 T 22-04-2016 VP2243 d322587f86365bd32cf0bffb1f54e0e2 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 2.3E-19 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 Pfam PF12833 Helix-turn-helix domain 223 302 1.5E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 SUPERFAMILY SSF46689 253 303 6.72E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 PANTHER PTHR11019:SF68 71 304 5.0E-52 T 22-04-2016 VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 Pfam PF01965 DJ-1/PfpI family 69 162 6.5E-10 T 22-04-2016 IPR002818 DJ-1/PfpI VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 Gene3D G3DSA:3.40.50.880 53 206 3.1E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 SUPERFAMILY SSF52317 6 180 4.85E-26 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 SUPERFAMILY SSF46689 203 251 3.67E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 Gene3D G3DSA:1.10.10.60 207 253 1.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 Gene3D G3DSA:1.10.10.60 254 302 1.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 SMART SM00342 217 300 4.9E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP1993 4b189d2f660b0986a9c10dcf757c7d0e 304 PANTHER PTHR11019 71 304 5.0E-52 T 22-04-2016 VP2128 56c32bb2bb05a42029aa24a357715e54 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.645 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VP2128 56c32bb2bb05a42029aa24a357715e54 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 6.1E-100 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VP2128 56c32bb2bb05a42029aa24a357715e54 332 PANTHER PTHR38772 2 331 2.1E-167 T 22-04-2016 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 PANTHER PTHR11361 3 853 0.0 T 22-04-2016 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 SMART SM00534 606 793 3.5E-118 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Pfam PF05190 MutS family domain IV 427 517 9.8E-31 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 SUPERFAMILY SSF52540 566 797 2.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Gene3D G3DSA:3.30.420.110 127 255 9.7E-42 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Gene3D G3DSA:1.10.1420.10 264 467 4.5E-57 T 22-04-2016 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Gene3D G3DSA:3.40.1170.10 3 120 3.8E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.237 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 SUPERFAMILY SSF55271 4 113 7.85E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Pfam PF01624 MutS domain I 8 119 2.6E-41 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Gene3D G3DSA:3.40.50.300 566 797 4.4E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 PANTHER PTHR11361:SF86 3 853 0.0 T 22-04-2016 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Pfam PF05192 MutS domain III 269 558 2.5E-39 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Pfam PF05188 MutS domain II 128 253 1.2E-30 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 SMART SM00533 283 590 2.1E-109 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 SUPERFAMILY SSF53150 114 266 2.35E-41 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 SUPERFAMILY SSF48334 267 564 7.46E-93 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VP2552 62bd78c9c7428c4ba3d755f88264ad55 853 Pfam PF00488 MutS domain V 609 796 1.2E-86 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VP0992 151427944effd2c345b9a706a87e26bf 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 8.2E-21 T 22-04-2016 VP0992 151427944effd2c345b9a706a87e26bf 246 SUPERFAMILY SSF102114 23 220 4.32E-30 T 22-04-2016 VP0992 151427944effd2c345b9a706a87e26bf 246 PANTHER PTHR30352 1 246 4.9E-142 T 22-04-2016 VP0992 151427944effd2c345b9a706a87e26bf 246 PANTHER PTHR30352:SF9 1 246 4.9E-142 T 22-04-2016 VP0992 151427944effd2c345b9a706a87e26bf 246 Gene3D G3DSA:3.80.30.10 69 245 3.4E-72 T 22-04-2016 VP0992 151427944effd2c345b9a706a87e26bf 246 Pfam PF04055 Radical SAM superfamily 24 178 5.4E-33 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP0992 151427944effd2c345b9a706a87e26bf 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.3E-108 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 VP0992 151427944effd2c345b9a706a87e26bf 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VP3015 4532f52cd687dd2e1d1d4b93a7181253 288 SUPERFAMILY SSF51658 30 256 1.24E-11 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VP3015 4532f52cd687dd2e1d1d4b93a7181253 288 Gene3D G3DSA:3.20.20.150 9 277 5.0E-99 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VP3015 4532f52cd687dd2e1d1d4b93a7181253 288 Hamap MF_00697 UPF0276 protein . 10 282 43.98 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 VP3015 4532f52cd687dd2e1d1d4b93a7181253 288 PANTHER PTHR42194 4 268 7.7E-60 T 22-04-2016 VP3015 4532f52cd687dd2e1d1d4b93a7181253 288 Pfam PF05114 Protein of unknown function (DUF692) 10 272 4.1E-105 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 VP3015 4532f52cd687dd2e1d1d4b93a7181253 288 PANTHER PTHR42194:SF1 4 268 7.7E-60 T 22-04-2016 VP0904 e9068d930eafb0bc4d116cba9b2ad277 220 Pfam PF02080 TrkA-C domain 154 214 1.2E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0904 e9068d930eafb0bc4d116cba9b2ad277 220 PANTHER PTHR16254 5 162 3.9E-41 T 22-04-2016 VP0904 e9068d930eafb0bc4d116cba9b2ad277 220 Pfam PF02254 TrkA-N domain 8 123 5.8E-28 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VP0904 e9068d930eafb0bc4d116cba9b2ad277 220 SUPERFAMILY SSF116726 134 215 3.01E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0904 e9068d930eafb0bc4d116cba9b2ad277 220 Gene3D G3DSA:3.30.70.1450 149 215 1.9E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0904 e9068d930eafb0bc4d116cba9b2ad277 220 SUPERFAMILY SSF51735 6 136 2.37E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0904 e9068d930eafb0bc4d116cba9b2ad277 220 Gene3D G3DSA:3.40.50.720 5 141 5.8E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VPA0428 623f01e26eeb684ac1ca9fb171cba84c 171 Pfam PF01928 CYTH domain 1 147 2.4E-17 T 22-04-2016 IPR023577 CYTH domain VPA0428 623f01e26eeb684ac1ca9fb171cba84c 171 SMART SM01118 1 153 1.0E-13 T 22-04-2016 IPR023577 CYTH domain VPA0428 623f01e26eeb684ac1ca9fb171cba84c 171 Gene3D G3DSA:2.40.320.10 1 161 3.7E-23 T 22-04-2016 IPR023577 CYTH domain VPA0428 623f01e26eeb684ac1ca9fb171cba84c 171 PANTHER PTHR39569 1 171 7.8E-59 T 22-04-2016 VPA0428 623f01e26eeb684ac1ca9fb171cba84c 171 SUPERFAMILY SSF55154 1 164 1.6E-34 T 22-04-2016 IPR033469 CYTH-like domain VPA0428 623f01e26eeb684ac1ca9fb171cba84c 171 PANTHER PTHR39569:SF1 1 171 7.8E-59 T 22-04-2016 VP1529 05c0b1848381138747f13830cefe2e5c 377 Pfam PF08402 TOBE domain 292 371 2.6E-12 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VP1529 05c0b1848381138747f13830cefe2e5c 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 3.7E-156 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VP1529 05c0b1848381138747f13830cefe2e5c 377 PANTHER PTHR24220 19 318 1.3E-162 T 22-04-2016 VP1529 05c0b1848381138747f13830cefe2e5c 377 Pfam PF00005 ABC transporter 35 174 3.2E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1529 05c0b1848381138747f13830cefe2e5c 377 PANTHER PTHR24220:SF150 19 318 1.3E-162 T 22-04-2016 VP1529 05c0b1848381138747f13830cefe2e5c 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1529 05c0b1848381138747f13830cefe2e5c 377 SMART SM00382 42 225 4.6E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1529 05c0b1848381138747f13830cefe2e5c 377 SUPERFAMILY SSF52540 18 257 5.32E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1529 05c0b1848381138747f13830cefe2e5c 377 Gene3D G3DSA:3.40.50.300 14 250 6.0E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1529 05c0b1848381138747f13830cefe2e5c 377 SUPERFAMILY SSF50331 250 372 6.23E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VP0125 5d900ee438e6030ac98f1f7c86e8eb1c 314 PANTHER PTHR30213 1 288 8.3E-104 T 22-04-2016 VP0125 5d900ee438e6030ac98f1f7c86e8eb1c 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 8 296 23.777 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial VP0125 5d900ee438e6030ac98f1f7c86e8eb1c 314 PANTHER PTHR30213:SF0 1 288 8.3E-104 T 22-04-2016 VP0125 5d900ee438e6030ac98f1f7c86e8eb1c 314 PIRSF PIRSF035875 9 296 1.3E-53 T 22-04-2016 IPR017039 Virulence factor BrkB VP0125 5d900ee438e6030ac98f1f7c86e8eb1c 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 4.9E-81 T 22-04-2016 IPR017039 Virulence factor BrkB VP0125 5d900ee438e6030ac98f1f7c86e8eb1c 314 Pfam PF03631 Virulence factor BrkB 33 279 2.3E-58 T 22-04-2016 IPR017039 Virulence factor BrkB VP2667 df9a2bc7d621f9afe0f7022d369a0ed6 187 PANTHER PTHR37481 1 183 1.2E-44 T 22-04-2016 VP2667 df9a2bc7d621f9afe0f7022d369a0ed6 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.1E-47 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VP2667 df9a2bc7d621f9afe0f7022d369a0ed6 187 PIRSF PIRSF028513 2 185 2.6E-28 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VP2667 df9a2bc7d621f9afe0f7022d369a0ed6 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.4E-45 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related VP2667 df9a2bc7d621f9afe0f7022d369a0ed6 187 PANTHER PTHR37481:SF1 1 183 1.2E-44 T 22-04-2016 VP2667 df9a2bc7d621f9afe0f7022d369a0ed6 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.495 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VP2285 944f706234ddec63b812e43ec5f9a102 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 2.5E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP2285 944f706234ddec63b812e43ec5f9a102 346 Gene3D G3DSA:3.90.650.10 173 343 2.0E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP2285 944f706234ddec63b812e43ec5f9a102 346 Gene3D G3DSA:3.30.1330.10 23 171 8.8E-65 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VP2285 944f706234ddec63b812e43ec5f9a102 346 SUPERFAMILY SSF55326 8 171 2.99E-54 T 22-04-2016 VP2285 944f706234ddec63b812e43ec5f9a102 346 PANTHER PTHR10520 8 346 7.2E-227 T 22-04-2016 VP2285 944f706234ddec63b812e43ec5f9a102 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.865 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2285 944f706234ddec63b812e43ec5f9a102 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 1.0E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VP2285 944f706234ddec63b812e43ec5f9a102 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.5E-151 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2285 944f706234ddec63b812e43ec5f9a102 346 SUPERFAMILY SSF56042 172 341 2.99E-62 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPA1046 e55e881d8e7eab6800d83f63d386d8ad 113 PANTHER PTHR31793 1 108 8.6E-34 T 22-04-2016 VPA1046 e55e881d8e7eab6800d83f63d386d8ad 113 Gene3D G3DSA:3.10.129.10 1 105 3.2E-35 T 22-04-2016 IPR029069 HotDog domain VPA1046 e55e881d8e7eab6800d83f63d386d8ad 113 PIRSF PIRSF003230 1 112 2.6E-34 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VPA1046 e55e881d8e7eab6800d83f63d386d8ad 113 SUPERFAMILY SSF54637 1 107 2.33E-30 T 22-04-2016 IPR029069 HotDog domain VPA1046 e55e881d8e7eab6800d83f63d386d8ad 113 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 1 101 2.8E-28 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VPA1046 e55e881d8e7eab6800d83f63d386d8ad 113 Pfam PF03061 Thioesterase superfamily 1 80 7.3E-15 T 22-04-2016 IPR006683 Thioesterase domain VPA1046 e55e881d8e7eab6800d83f63d386d8ad 113 PANTHER PTHR31793:SF9 1 108 8.6E-34 T 22-04-2016 VP0518 82d50b12ac772c89605543f7f8a61278 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 146.684 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VP0518 82d50b12ac772c89605543f7f8a61278 226 Gene3D G3DSA:3.40.600.10 3 221 4.8E-80 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VP0518 82d50b12ac772c89605543f7f8a61278 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.5E-34 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VP0518 82d50b12ac772c89605543f7f8a61278 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 2.1E-100 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VP0518 82d50b12ac772c89605543f7f8a61278 226 SMART SM00927 53 151 5.7E-65 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VP0518 82d50b12ac772c89605543f7f8a61278 226 SUPERFAMILY SSF52980 2 220 1.39E-80 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPA0355 100cb5b403a950909355112b5f4a63cc 242 SUPERFAMILY SSF56801 29 210 1.57E-46 T 22-04-2016 VPA0355 100cb5b403a950909355112b5f4a63cc 242 PANTHER PTHR24096 15 242 5.5E-92 T 22-04-2016 VPA0355 100cb5b403a950909355112b5f4a63cc 242 PANTHER PTHR24096:SF193 15 242 5.5E-92 T 22-04-2016 VPA0355 100cb5b403a950909355112b5f4a63cc 242 Pfam PF00501 AMP-binding enzyme 20 161 4.7E-37 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPA0355 100cb5b403a950909355112b5f4a63cc 242 Gene3D G3DSA:3.40.50.980 23 82 3.1E-6 T 22-04-2016 VPA0355 100cb5b403a950909355112b5f4a63cc 242 Gene3D G3DSA:2.30.38.10 96 155 1.7E-20 T 22-04-2016 VP2074 9d1f645d8a573a9ab0afcef7107648c9 202 Gene3D G3DSA:3.10.450.50 171 202 4.0E-11 T 22-04-2016 IPR032710 NTF2-like domain VP2074 9d1f645d8a573a9ab0afcef7107648c9 202 SUPERFAMILY SSF103642 182 201 2.13E-7 T 22-04-2016 VP2074 9d1f645d8a573a9ab0afcef7107648c9 202 PANTHER PTHR33747 56 202 2.7E-18 T 22-04-2016 VP2074 9d1f645d8a573a9ab0afcef7107648c9 202 Pfam PF02810 SEC-C motif 184 202 1.5E-9 T 22-04-2016 IPR004027 SEC-C motif VP2074 9d1f645d8a573a9ab0afcef7107648c9 202 PANTHER PTHR33747:SF1 56 202 2.7E-18 T 22-04-2016 VP2074 9d1f645d8a573a9ab0afcef7107648c9 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 19 157 2.2E-8 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VP2466 a7c4393a94f6925c83ea841d93342960 157 SUPERFAMILY SSF54534 81 156 1.83E-24 T 22-04-2016 VP2466 a7c4393a94f6925c83ea841d93342960 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 8.8E-54 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VP2466 a7c4393a94f6925c83ea841d93342960 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VP2466 a7c4393a94f6925c83ea841d93342960 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VP2466 a7c4393a94f6925c83ea841d93342960 157 Gene3D G3DSA:3.10.50.30 78 156 2.1E-32 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VP2466 a7c4393a94f6925c83ea841d93342960 157 PIRSF PIRSF006092 1 157 2.8E-47 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VP2466 a7c4393a94f6925c83ea841d93342960 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 7.5E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VP2466 a7c4393a94f6925c83ea841d93342960 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.018 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VP2466 a7c4393a94f6925c83ea841d93342960 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.3E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VP2466 a7c4393a94f6925c83ea841d93342960 157 Gene3D G3DSA:1.10.287.180 1 74 5.1E-28 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VP2466 a7c4393a94f6925c83ea841d93342960 157 SUPERFAMILY SSF46557 2 75 1.02E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VP2466 a7c4393a94f6925c83ea841d93342960 157 PANTHER PTHR30437 1 156 2.9E-63 T 22-04-2016 VP2015 c812d47968b3ef4836955e0e3891a437 203 Gene3D G3DSA:1.10.760.10 121 201 4.4E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2015 c812d47968b3ef4836955e0e3891a437 203 Pfam PF00034 Cytochrome c 133 201 3.5E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2015 c812d47968b3ef4836955e0e3891a437 203 PIRSF PIRSF000005 1 203 4.9E-62 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VP2015 c812d47968b3ef4836955e0e3891a437 203 Gene3D G3DSA:1.10.760.10 27 98 2.3E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2015 c812d47968b3ef4836955e0e3891a437 203 PANTHER PTHR33751 27 202 5.3E-46 T 22-04-2016 VP2015 c812d47968b3ef4836955e0e3891a437 203 SUPERFAMILY SSF46626 120 201 3.49E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2015 c812d47968b3ef4836955e0e3891a437 203 PANTHER PTHR33751:SF3 27 202 5.3E-46 T 22-04-2016 VP2015 c812d47968b3ef4836955e0e3891a437 203 SUPERFAMILY SSF46626 27 96 3.26E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 SUPERFAMILY SSF46609 4 88 1.28E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 PANTHER PTHR11404 6 199 7.5E-111 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 PRINTS PR01703 Manganese superoxide dismutase signature 11 22 1.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 1.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 PRINTS PR01703 Manganese superoxide dismutase signature 70 83 1.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 PRINTS PR01703 Manganese superoxide dismutase signature 32 45 1.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 8 87 4.9E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 195 6.3E-39 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 Gene3D G3DSA:1.10.287.990 25 87 1.7E-23 T 22-04-2016 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 PANTHER PTHR11404:SF8 6 199 7.5E-111 T 22-04-2016 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 SUPERFAMILY SSF54719 89 198 1.44E-43 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2118 b1d22fb80aec3306bf181d20bbfe1e05 199 PIRSF PIRSF000349 1 199 3.1E-85 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP0685 72796aa1705f7b489a17453603e03990 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 7.5E-54 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VP0685 72796aa1705f7b489a17453603e03990 168 Gene3D G3DSA:1.10.3760.10 113 156 1.4E-4 T 22-04-2016 IPR027416 YutG-like domain VP0685 72796aa1705f7b489a17453603e03990 168 SUPERFAMILY SSF101307 9 161 7.19E-50 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VP0685 72796aa1705f7b489a17453603e03990 168 PIRSF PIRSF006162 6 167 3.6E-55 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VP0685 72796aa1705f7b489a17453603e03990 168 PANTHER PTHR36305 1 166 3.6E-70 T 22-04-2016 VP1808 4f26bbdf92e982cf58f5596f63bf5168 226 SMART SM00028 73 107 0.073 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1808 4f26bbdf92e982cf58f5596f63bf5168 226 SMART SM00028 26 72 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1808 4f26bbdf92e982cf58f5596f63bf5168 226 Gene3D G3DSA:1.25.40.10 21 189 3.4E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1808 4f26bbdf92e982cf58f5596f63bf5168 226 PANTHER PTHR23083 12 177 2.6E-12 T 22-04-2016 VP1808 4f26bbdf92e982cf58f5596f63bf5168 226 Pfam PF13414 TPR repeat 53 87 2.6E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1808 4f26bbdf92e982cf58f5596f63bf5168 226 SUPERFAMILY SSF48452 51 124 8.35E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1808 4f26bbdf92e982cf58f5596f63bf5168 226 SUPERFAMILY SSF48452 162 196 8.35E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0504 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.941 T 22-04-2016 IPR005583 Peroxide stress protein YaaA VP0504 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 Pfam PF03883 Protein of unknown function (DUF328) 1 243 3.6E-95 T 22-04-2016 IPR005583 Peroxide stress protein YaaA VP0504 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 PANTHER PTHR30283:SF3 2 255 2.5E-121 T 22-04-2016 VP0504 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 PANTHER PTHR30283 2 255 2.5E-121 T 22-04-2016 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 Pfam PF01872 RibD C-terminal domain 158 361 6.1E-47 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 PIRSF PIRSF006769 11 372 1.3E-118 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 PANTHER PTHR11079:SF10 13 222 2.4E-67 T 22-04-2016 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 15 110 2.9E-20 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 3.6E-56 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 Gene3D G3DSA:3.40.430.10 140 372 1.2E-61 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 PANTHER PTHR11079 13 222 2.4E-67 T 22-04-2016 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 SUPERFAMILY SSF53927 14 156 2.84E-48 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 Gene3D G3DSA:3.40.140.10 14 139 1.6E-35 T 22-04-2016 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 8.4E-125 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VP0679 91f4cfa78cf860953dc2ba68a25396f4 374 SUPERFAMILY SSF53597 155 366 6.04E-52 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VP0212 35da22cbb1b7fcc5465cf82b08e74fc6 352 SUPERFAMILY SSF53756 2 344 8.63E-97 T 22-04-2016 VP0212 35da22cbb1b7fcc5465cf82b08e74fc6 352 Gene3D G3DSA:3.40.50.2000 2 140 1.6E-51 T 22-04-2016 VP0212 35da22cbb1b7fcc5465cf82b08e74fc6 352 PANTHER PTHR30160:SF7 1 344 1.3E-98 T 22-04-2016 VP0212 35da22cbb1b7fcc5465cf82b08e74fc6 352 PANTHER PTHR30160 1 344 1.3E-98 T 22-04-2016 VP0212 35da22cbb1b7fcc5465cf82b08e74fc6 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 345 2.0E-148 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 VP0212 35da22cbb1b7fcc5465cf82b08e74fc6 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 1.1E-70 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VP0212 35da22cbb1b7fcc5465cf82b08e74fc6 352 Gene3D G3DSA:3.40.50.2000 167 344 1.1E-57 T 22-04-2016 VP1939 87112fcc5241bb583a45b0bac0957cda 170 PANTHER PTHR34875 1 169 5.5E-27 T 22-04-2016 VP1939 87112fcc5241bb583a45b0bac0957cda 170 Gene3D G3DSA:3.30.70.260 4 67 2.4E-6 T 22-04-2016 VP1939 87112fcc5241bb583a45b0bac0957cda 170 Gene3D G3DSA:3.30.70.260 84 168 4.7E-16 T 22-04-2016 VP1939 87112fcc5241bb583a45b0bac0957cda 170 Pfam PF13740 ACT domain 5 67 1.9E-10 T 22-04-2016 VP1939 87112fcc5241bb583a45b0bac0957cda 170 PIRSF PIRSF028103 1 169 5.3E-43 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VP1939 87112fcc5241bb583a45b0bac0957cda 170 SUPERFAMILY SSF55021 90 167 1.25E-9 T 22-04-2016 VP2439 e197a301064636548ff9574a9eec0a6e 257 Gene3D G3DSA:3.20.20.140 1 255 2.7E-78 T 22-04-2016 VP2439 e197a301064636548ff9574a9eec0a6e 257 PIRSF PIRSF005902 1 257 6.5E-65 T 22-04-2016 IPR001130 TatD family GO:0016788 VP2439 e197a301064636548ff9574a9eec0a6e 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VP2439 e197a301064636548ff9574a9eec0a6e 257 PANTHER PTHR10060 1 257 2.4E-87 T 22-04-2016 IPR001130 TatD family GO:0016788 VP2439 e197a301064636548ff9574a9eec0a6e 257 SUPERFAMILY SSF51556 1 255 1.31E-76 T 22-04-2016 IPR032466 Metal-dependent hydrolase VP2439 e197a301064636548ff9574a9eec0a6e 257 Pfam PF01026 TatD related DNase 4 253 4.0E-64 T 22-04-2016 IPR001130 TatD family GO:0016788 VP2439 e197a301064636548ff9574a9eec0a6e 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VP2010 75b45d632049e420891ecd7d9cd855ad 577 Gene3D G3DSA:1.10.287.130 355 416 8.5E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2010 75b45d632049e420891ecd7d9cd855ad 577 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 28 261 3.9E-38 T 22-04-2016 VP2010 75b45d632049e420891ecd7d9cd855ad 577 Gene3D G3DSA:3.30.565.10 422 576 1.2E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2010 75b45d632049e420891ecd7d9cd855ad 577 SUPERFAMILY SSF55874 411 575 5.63E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2010 75b45d632049e420891ecd7d9cd855ad 577 SUPERFAMILY SSF53850 30 258 2.17E-17 T 22-04-2016 VP2010 75b45d632049e420891ecd7d9cd855ad 577 PANTHER PTHR24423 351 574 1.4E-41 T 22-04-2016 VP2010 75b45d632049e420891ecd7d9cd855ad 577 PANTHER PTHR24423 2 14 1.4E-41 T 22-04-2016 VP2010 75b45d632049e420891ecd7d9cd855ad 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 4.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2010 75b45d632049e420891ecd7d9cd855ad 577 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 555 4.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2010 75b45d632049e420891ecd7d9cd855ad 577 SMART SM00387 464 577 1.0E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2010 75b45d632049e420891ecd7d9cd855ad 577 PANTHER PTHR24423:SF485 351 574 1.4E-41 T 22-04-2016 VP2010 75b45d632049e420891ecd7d9cd855ad 577 PANTHER PTHR24423:SF485 2 14 1.4E-41 T 22-04-2016 VP2010 75b45d632049e420891ecd7d9cd855ad 577 SMART SM00388 353 422 2.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2010 75b45d632049e420891ecd7d9cd855ad 577 Gene3D G3DSA:3.40.190.10 105 211 7.4E-9 T 22-04-2016 VP2010 75b45d632049e420891ecd7d9cd855ad 577 Pfam PF00512 His Kinase A (phospho-acceptor) domain 359 418 3.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2010 75b45d632049e420891ecd7d9cd855ad 577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 575 2.0E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2010 75b45d632049e420891ecd7d9cd855ad 577 SUPERFAMILY SSF47384 346 418 4.12E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1099 9b9d50910c73a9db6b430662ac97c3d0 256 SUPERFAMILY SSF47240 11 61 1.4E-74 T 22-04-2016 IPR009078 Ferritin-like superfamily VP1099 9b9d50910c73a9db6b430662ac97c3d0 256 SUPERFAMILY SSF47240 109 255 1.4E-74 T 22-04-2016 IPR009078 Ferritin-like superfamily VP1099 9b9d50910c73a9db6b430662ac97c3d0 256 PANTHER PTHR42637 1 256 8.2E-107 T 22-04-2016 VP1099 9b9d50910c73a9db6b430662ac97c3d0 256 PANTHER PTHR42637:SF1 1 256 8.2E-107 T 22-04-2016 VP1099 9b9d50910c73a9db6b430662ac97c3d0 256 PIRSF PIRSF020736 2 256 7.2E-93 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VP1099 9b9d50910c73a9db6b430662ac97c3d0 256 Gene3D G3DSA:1.20.1260.10 8 61 1.3E-89 T 22-04-2016 IPR012347 Ferritin-related VP1099 9b9d50910c73a9db6b430662ac97c3d0 256 Gene3D G3DSA:1.20.1260.10 109 255 1.3E-89 T 22-04-2016 IPR012347 Ferritin-related VP1099 9b9d50910c73a9db6b430662ac97c3d0 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 5.0E-121 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 Gene3D G3DSA:1.10.287.130 192 250 2.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 PANTHER PTHR24423 3 12 3.8E-40 T 22-04-2016 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 SMART SM00388 200 265 1.3E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 PANTHER PTHR24423:SF491 151 330 3.8E-40 T 22-04-2016 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 PANTHER PTHR24423:SF491 3 12 3.8E-40 T 22-04-2016 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 SUPERFAMILY SSF55874 254 330 9.97E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPA1557 8c7732702e7d04808b3676a40bcb7781 330 PANTHER PTHR24423 151 330 3.8E-40 T 22-04-2016 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 SUPERFAMILY SSF47384 185 266 7.26E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 265 1.2E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPA1557 8c7732702e7d04808b3676a40bcb7781 330 Gene3D G3DSA:3.30.565.10 251 330 4.5E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.57 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 PANTHER PTHR21256 13 211 7.5E-114 T 22-04-2016 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 PANTHER PTHR21256:SF16 13 211 7.5E-114 T 22-04-2016 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 SUPERFAMILY SSF141734 14 124 9.81E-46 T 22-04-2016 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 4.0E-24 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 8.9E-32 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 7.8E-18 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.835 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 SUPERFAMILY SSF101386 123 210 2.43E-25 T 22-04-2016 VP1144 928882980f5ab1e88ba07e4124eb3a5b 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.7E-31 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VP2818 aa8ff488f427d933e68c21b3d746bb67 310 Pfam PF01715 IPP transferase 42 287 1.7E-86 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VP2818 aa8ff488f427d933e68c21b3d746bb67 310 SUPERFAMILY SSF52540 10 153 1.33E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2818 aa8ff488f427d933e68c21b3d746bb67 310 Gene3D G3DSA:3.40.50.300 8 174 3.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2818 aa8ff488f427d933e68c21b3d746bb67 310 Gene3D G3DSA:1.10.287.890 203 285 2.5E-34 T 22-04-2016 VP2818 aa8ff488f427d933e68c21b3d746bb67 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 294 3.6E-116 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VP2818 aa8ff488f427d933e68c21b3d746bb67 310 PANTHER PTHR11088 6 294 2.4E-119 T 22-04-2016 VP2818 aa8ff488f427d933e68c21b3d746bb67 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.263 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VP1023 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VP1023 9226399360a3f1083f524f77c665b772 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.475 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VP1023 9226399360a3f1083f524f77c665b772 405 Gene3D G3DSA:3.90.550.10 324 367 4.5E-74 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1023 9226399360a3f1083f524f77c665b772 405 Gene3D G3DSA:3.90.550.10 6 282 4.5E-74 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1023 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF53448 4 275 2.58E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1023 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF53448 341 358 2.58E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1023 9226399360a3f1083f524f77c665b772 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 3.0E-154 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VP1023 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VP1023 9226399360a3f1083f524f77c665b772 405 PANTHER PTHR22572 5 377 2.9E-154 T 22-04-2016 VP1023 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VP1023 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF51161 292 403 3.68E-15 T 22-04-2016 IPR011004 Trimeric LpxA-like VP1023 9226399360a3f1083f524f77c665b772 405 PANTHER PTHR22572:SF10 5 377 2.9E-154 T 22-04-2016 VP1023 9226399360a3f1083f524f77c665b772 405 Pfam PF00483 Nucleotidyl transferase 6 273 2.8E-63 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VP1737 eab3d20e3192ac91405327211febc366 121 Gene3D G3DSA:3.10.180.10 2 118 5.4E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP1737 eab3d20e3192ac91405327211febc366 121 PIRSF PIRSF039020 1 121 1.4E-43 T 22-04-2016 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase VP1737 eab3d20e3192ac91405327211febc366 121 SUPERFAMILY SSF54593 4 118 5.92E-16 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP0372 eb27fa4b9dc848c25e1a5db56c8dcee7 582 SUPERFAMILY SSF69593 49 248 1.96E-8 T 22-04-2016 VP0372 eb27fa4b9dc848c25e1a5db56c8dcee7 582 Gene3D G3DSA:3.40.630.30 320 453 4.7E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0372 eb27fa4b9dc848c25e1a5db56c8dcee7 582 PANTHER PTHR37323 1 580 9.6E-118 T 22-04-2016 VP0372 eb27fa4b9dc848c25e1a5db56c8dcee7 582 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 6.5E-23 T 22-04-2016 VP0372 eb27fa4b9dc848c25e1a5db56c8dcee7 582 SMART SM00563 75 199 3.3E-4 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP0372 eb27fa4b9dc848c25e1a5db56c8dcee7 582 SUPERFAMILY SSF55729 313 459 4.18E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0372 eb27fa4b9dc848c25e1a5db56c8dcee7 582 PANTHER PTHR37323:SF1 1 580 9.6E-118 T 22-04-2016 VP1662 c4f18916baf178a030bde50020647bab 708 PIRSF PIRSF005419 3 708 8.3E-264 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP1662 c4f18916baf178a030bde50020647bab 708 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 17 706 2.9E-300 T 22-04-2016 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 VP1662 c4f18916baf178a030bde50020647bab 708 PANTHER PTHR30161:SF2 1 708 0.0 T 22-04-2016 VP1662 c4f18916baf178a030bde50020647bab 708 PANTHER PTHR30161 1 708 0.0 T 22-04-2016 VP1662 c4f18916baf178a030bde50020647bab 708 Pfam PF00771 FHIPEP family 29 698 7.0E-238 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP1662 c4f18916baf178a030bde50020647bab 708 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 140 163 - T 22-04-2016 IPR025505 FHIPEP conserved site VP1662 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 135 151 5.0E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP1662 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 154 172 5.0E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP1662 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 235 249 5.0E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP1662 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 73 92 5.0E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP1662 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 36 49 5.0E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP1662 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 184 201 5.0E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VP0902 e6084ad6624dc370710d3c92bb81cd24 450 Pfam PF01595 Domain of unknown function DUF21 16 206 2.6E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 VP0902 e6084ad6624dc370710d3c92bb81cd24 450 SUPERFAMILY SSF54631 209 342 8.78E-23 T 22-04-2016 VP0902 e6084ad6624dc370710d3c92bb81cd24 450 SUPERFAMILY SSF56176 354 433 7.63E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VP0902 e6084ad6624dc370710d3c92bb81cd24 450 Gene3D G3DSA:3.30.465.10 332 433 1.3E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VP0902 e6084ad6624dc370710d3c92bb81cd24 450 PANTHER PTHR22777:SF8 11 447 1.2E-149 T 22-04-2016 VP0902 e6084ad6624dc370710d3c92bb81cd24 450 Gene3D G3DSA:3.10.580.10 209 331 4.9E-12 T 22-04-2016 VP0902 e6084ad6624dc370710d3c92bb81cd24 450 PANTHER PTHR22777 11 447 1.2E-149 T 22-04-2016 VP0902 e6084ad6624dc370710d3c92bb81cd24 450 SMART SM01091 353 435 4.9E-25 T 22-04-2016 IPR005170 Transporter-associated domain VP0902 e6084ad6624dc370710d3c92bb81cd24 450 Pfam PF03471 Transporter associated domain 354 434 5.9E-20 T 22-04-2016 IPR005170 Transporter-associated domain VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 PANTHER PTHR19139 1 232 3.9E-76 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 Gene3D G3DSA:1.20.1080.10 1 228 2.7E-66 T 22-04-2016 IPR023271 Aquaporin-like VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 Pfam PF00230 Major intrinsic protein 2 222 2.1E-48 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 SUPERFAMILY SSF81338 2 227 3.79E-68 T 22-04-2016 IPR023271 Aquaporin-like VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 1.8E-59 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 PANTHER PTHR19139:SF103 1 232 3.9E-76 T 22-04-2016 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 VP2176 a5bf9a3709ab779fb667e4cdaa80ef32 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.001 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 253 535 1.9E-98 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 SUPERFAMILY SSF51621 253 536 9.95E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 Gene3D G3DSA:3.20.20.60 255 536 3.2E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 Gene3D G3DSA:1.10.274.10 34 130 2.4E-25 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 441 459 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 10 536 2.1E-140 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 SUPERFAMILY SSF52009 123 243 6.02E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 PANTHER PTHR22931:SF15 46 536 4.0E-158 T 22-04-2016 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 PIRSF PIRSF000732 5 538 7.2E-177 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 Pfam PF00391 PEP-utilising enzyme, mobile domain 149 222 5.6E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 SUPERFAMILY SSF47831 35 141 2.35E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 290 309 2.4E-24 T 22-04-2016 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 494 506 2.4E-24 T 22-04-2016 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 458 473 2.4E-24 T 22-04-2016 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 441 456 2.4E-24 T 22-04-2016 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 Pfam PF05524 PEP-utilising enzyme, N-terminal 12 124 5.1E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 Gene3D G3DSA:3.50.30.10 131 248 2.3E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 PANTHER PTHR22931 46 536 4.0E-158 T 22-04-2016 VP0366 b38feb9017a0409bef097d02c0c04ce1 538 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 181 192 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VP2750 128a3a8e759969a177a2dd1bc05c4bb6 338 PIRSF PIRSF019169 1 328 1.1E-93 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VP2750 128a3a8e759969a177a2dd1bc05c4bb6 338 SUPERFAMILY SSF53067 6 165 1.59E-6 T 22-04-2016 VP2750 128a3a8e759969a177a2dd1bc05c4bb6 338 PANTHER PTHR32432:SF3 6 330 1.5E-46 T 22-04-2016 VP2750 128a3a8e759969a177a2dd1bc05c4bb6 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 3.3E-73 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VP2750 128a3a8e759969a177a2dd1bc05c4bb6 338 Gene3D G3DSA:3.30.420.40 3 99 2.4E-9 T 22-04-2016 VP2750 128a3a8e759969a177a2dd1bc05c4bb6 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 216 1.5E-39 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VP2750 128a3a8e759969a177a2dd1bc05c4bb6 338 Pfam PF11104 Type IV pilus assembly protein PilM; 237 326 1.8E-11 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VP2750 128a3a8e759969a177a2dd1bc05c4bb6 338 PANTHER PTHR32432 6 330 1.5E-46 T 22-04-2016 VP0072 7021a1536f1878f2818cad533f217940 154 SMART SM00344 8 115 5.0E-40 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VP0072 7021a1536f1878f2818cad533f217940 154 Gene3D G3DSA:3.30.70.920 71 145 4.4E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VP0072 7021a1536f1878f2818cad533f217940 154 PANTHER PTHR30154:SF2 1 154 8.3E-62 T 22-04-2016 VP0072 7021a1536f1878f2818cad533f217940 154 SUPERFAMILY SSF46785 7 68 2.03E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0072 7021a1536f1878f2818cad533f217940 154 Gene3D G3DSA:1.10.10.10 5 59 9.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0072 7021a1536f1878f2818cad533f217940 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 7.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP0072 7021a1536f1878f2818cad533f217940 154 PANTHER PTHR30154 1 154 8.3E-62 T 22-04-2016 VP0072 7021a1536f1878f2818cad533f217940 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VP0072 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.3E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP0072 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.3E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP0072 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.3E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP0072 7021a1536f1878f2818cad533f217940 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP1151 d1bb1ed794116010dcac496547b60561 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.748 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VP1151 d1bb1ed794116010dcac496547b60561 192 Pfam PF00265 Thymidine kinase 2 186 3.2E-59 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VP1151 d1bb1ed794116010dcac496547b60561 192 PANTHER PTHR11441 1 190 2.5E-80 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VP1151 d1bb1ed794116010dcac496547b60561 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VP1151 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF57716 142 190 1.57E-16 T 22-04-2016 VP1151 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF52540 2 141 5.57E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1151 d1bb1ed794116010dcac496547b60561 192 PIRSF PIRSF035805 1 192 9.2E-57 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VP1151 d1bb1ed794116010dcac496547b60561 192 Gene3D G3DSA:3.30.60.20 142 189 4.0E-19 T 22-04-2016 VP2292 73611874a22ed276c12643357325f7e2 240 PANTHER PTHR30231:SF0 10 238 9.9E-118 T 22-04-2016 VP2292 73611874a22ed276c12643357325f7e2 240 Gene3D G3DSA:3.30.420.10 7 191 8.9E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2292 73611874a22ed276c12643357325f7e2 240 PANTHER PTHR30231 10 238 9.9E-118 T 22-04-2016 VP2292 73611874a22ed276c12643357325f7e2 240 SUPERFAMILY SSF53098 9 190 3.17E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2292 73611874a22ed276c12643357325f7e2 240 Pfam PF00929 Exonuclease 13 180 5.5E-38 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP2292 73611874a22ed276c12643357325f7e2 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 5.1E-82 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2292 73611874a22ed276c12643357325f7e2 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 239 1.4E-97 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2292 73611874a22ed276c12643357325f7e2 240 SMART SM00479 11 189 4.4E-53 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP0750 03732c02c73637085556ccf71a3909d8 371 SUPERFAMILY SSF55120 66 227 2.88E-38 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP0750 03732c02c73637085556ccf71a3909d8 371 SMART SM00363 7 65 8.8E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0750 03732c02c73637085556ccf71a3909d8 371 PANTHER PTHR21600 1 300 3.8E-149 T 22-04-2016 VP0750 03732c02c73637085556ccf71a3909d8 371 PANTHER PTHR21600:SF24 1 300 3.8E-149 T 22-04-2016 VP0750 03732c02c73637085556ccf71a3909d8 371 SUPERFAMILY SSF55174 8 60 3.36E-14 T 22-04-2016 VP0750 03732c02c73637085556ccf71a3909d8 371 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VP0750 03732c02c73637085556ccf71a3909d8 371 Gene3D G3DSA:3.10.290.10 8 67 1.7E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0750 03732c02c73637085556ccf71a3909d8 371 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 1.8E-48 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VP0750 03732c02c73637085556ccf71a3909d8 371 Pfam PF00849 RNA pseudouridylate synthase 67 193 9.1E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP0750 03732c02c73637085556ccf71a3909d8 371 Pfam PF01479 S4 domain 8 52 4.6E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP2405 45b81c8a4916863f5a6df79a6e1d65e8 356 Pfam PF13520 Amino acid permease 3 322 3.8E-19 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP2405 45b81c8a4916863f5a6df79a6e1d65e8 356 PANTHER PTHR11785:SF342 2 335 1.9E-55 T 22-04-2016 VP2405 45b81c8a4916863f5a6df79a6e1d65e8 356 PANTHER PTHR11785 2 335 1.9E-55 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP2405 45b81c8a4916863f5a6df79a6e1d65e8 356 PIRSF PIRSF006060 1 355 1.4E-37 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 SUPERFAMILY SSF54631 274 392 2.49E-15 T 22-04-2016 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 PANTHER PTHR24220 6 16 1.3E-155 T 22-04-2016 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 PANTHER PTHR24220 41 274 1.3E-155 T 22-04-2016 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 Gene3D G3DSA:3.10.580.10 273 394 2.2E-19 T 22-04-2016 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 SUPERFAMILY SSF52540 43 271 2.49E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1726 3b30922178028d21a3304c9c6b8dd24a 395 PANTHER PTHR24220:SF374 6 16 1.3E-155 T 22-04-2016 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 PANTHER PTHR24220:SF374 41 274 1.3E-155 T 22-04-2016 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 3.7E-150 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 Pfam PF00571 CBS domain 348 393 3.6E-5 T 22-04-2016 IPR000644 CBS domain VP1726 3b30922178028d21a3304c9c6b8dd24a 395 Pfam PF00005 ABC transporter 45 192 2.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1726 3b30922178028d21a3304c9c6b8dd24a 395 SMART SM00382 53 242 6.3E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1726 3b30922178028d21a3304c9c6b8dd24a 395 Gene3D G3DSA:3.40.50.300 2 264 2.2E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0324 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:3.30.1360.40 80 154 4.5E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VP0324 077711d03c0050bada1b5a44f0618de8 156 PANTHER PTHR34471 2 156 1.3E-64 T 22-04-2016 VP0324 077711d03c0050bada1b5a44f0618de8 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 2.0E-20 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 7.8E-22 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF46785 3 77 3.36E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0324 077711d03c0050bada1b5a44f0618de8 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 8.4E-24 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.7E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.7E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.7E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.7E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 5.4E-44 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:1.10.10.10 2 77 9.7E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0324 077711d03c0050bada1b5a44f0618de8 156 PANTHER PTHR34471:SF1 2 156 1.3E-64 T 22-04-2016 VP0324 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VP0324 077711d03c0050bada1b5a44f0618de8 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.828 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VP2671 ca892d7100e074bdc15d0186497f0e86 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 8.0E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VP2671 ca892d7100e074bdc15d0186497f0e86 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.6E-34 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VP2671 ca892d7100e074bdc15d0186497f0e86 95 SUPERFAMILY SSF69754 1 95 4.05E-35 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VP2671 ca892d7100e074bdc15d0186497f0e86 95 PANTHER PTHR33231 1 95 7.6E-42 T 22-04-2016 VP2671 ca892d7100e074bdc15d0186497f0e86 95 Gene3D G3DSA:3.30.160.100 1 95 2.5E-38 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPA0491 0932f4682fb043f8e9c0f4a071ba2b76 543 PANTHER PTHR11938 1 543 1.5E-296 T 22-04-2016 VPA0491 0932f4682fb043f8e9c0f4a071ba2b76 543 SUPERFAMILY SSF51395 306 543 8.91E-83 T 22-04-2016 VPA0491 0932f4682fb043f8e9c0f4a071ba2b76 543 Pfam PF04898 Glutamate synthase central domain 326 543 1.2E-88 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VPA0491 0932f4682fb043f8e9c0f4a071ba2b76 543 Gene3D G3DSA:3.60.20.10 2 307 3.2E-135 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPA0491 0932f4682fb043f8e9c0f4a071ba2b76 543 PANTHER PTHR11938:SF1 1 543 1.5E-296 T 22-04-2016 VPA0491 0932f4682fb043f8e9c0f4a071ba2b76 543 Gene3D G3DSA:3.20.20.70 308 543 3.7E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPA0491 0932f4682fb043f8e9c0f4a071ba2b76 543 SUPERFAMILY SSF56235 2 301 1.25E-110 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPA0491 0932f4682fb043f8e9c0f4a071ba2b76 543 Pfam PF00310 Glutamine amidotransferases class-II 2 297 2.8E-135 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VP0142 f0c94560bfdfc54a9e558bc13ba51a0d 164 Gene3D G3DSA:3.30.1360.100 86 164 1.1E-33 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VP0142 f0c94560bfdfc54a9e558bc13ba51a0d 164 Pfam PF04612 Type II secretion system (T2SS), protein M 7 163 7.9E-56 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VP0142 f0c94560bfdfc54a9e558bc13ba51a0d 164 SUPERFAMILY SSF103054 86 163 2.88E-25 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VP0142 f0c94560bfdfc54a9e558bc13ba51a0d 164 PIRSF PIRSF006291 3 163 4.1E-40 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.1E-22 T 22-04-2016 VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.6E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 PANTHER PTHR30154 4 162 7.4E-106 T 22-04-2016 VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 SMART SM00344 12 121 3.2E-55 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:3.30.70.920 65 161 3.0E-32 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF54909 74 157 1.02E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:1.10.10.10 13 64 6.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1104 326bb5dbc8f43917cd6ffffb39abc121 164 PANTHER PTHR30154:SF0 4 162 7.4E-106 T 22-04-2016 VP0121 b097d272efc3934bae82ae4aace570f5 469 Gene3D G3DSA:3.10.20.70 3 105 1.3E-39 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 8.8E-31 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 PANTHER PTHR20852:SF15 161 469 2.0E-272 T 22-04-2016 VP0121 b097d272efc3934bae82ae4aace570f5 469 PANTHER PTHR20852:SF15 1 138 2.0E-272 T 22-04-2016 VP0121 b097d272efc3934bae82ae4aace570f5 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.5E-212 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 SMART SM01230 102 379 1.9E-152 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 6.1E-139 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 Gene3D G3DSA:3.30.590.10 106 455 1.1E-139 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 VP0121 b097d272efc3934bae82ae4aace570f5 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 PANTHER PTHR20852 161 469 2.0E-272 T 22-04-2016 VP0121 b097d272efc3934bae82ae4aace570f5 469 PANTHER PTHR20852 1 138 2.0E-272 T 22-04-2016 VP0121 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP0121 b097d272efc3934bae82ae4aace570f5 469 SUPERFAMILY SSF55931 102 468 3.92E-137 T 22-04-2016 VP1458 471cc774a4eb618a517ab26226ab30d7 212 Pfam PF02397 Bacterial sugar transferase 14 207 4.4E-51 T 22-04-2016 IPR003362 Bacterial sugar transferase VP1458 471cc774a4eb618a517ab26226ab30d7 212 PANTHER PTHR30576 11 211 6.3E-76 T 22-04-2016 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 2.5E-72 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 2.9E-54 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 2.6E-38 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 PANTHER PTHR30046:SF0 29 580 4.6E-186 T 22-04-2016 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 PANTHER PTHR30046 29 580 4.6E-186 T 22-04-2016 VP2249 9b99d02f9a20b9badc0e11f6b6e705df 580 PIRSF PIRSF004862 27 580 1.2E-162 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VP1308 9aed2ec0ebd749dfde5b0ef07677c7da 599 SUPERFAMILY SSF55486 4 576 2.08E-95 T 22-04-2016 VP1308 9aed2ec0ebd749dfde5b0ef07677c7da 599 PANTHER PTHR11804:SF46 1 593 5.3E-88 T 22-04-2016 VP1308 9aed2ec0ebd749dfde5b0ef07677c7da 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 1.0E-201 T 22-04-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VP1308 9aed2ec0ebd749dfde5b0ef07677c7da 599 PANTHER PTHR11804 1 593 5.3E-88 T 22-04-2016 VP1308 9aed2ec0ebd749dfde5b0ef07677c7da 599 Pfam PF08439 Oligopeptidase F 106 174 1.9E-12 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain VP1308 9aed2ec0ebd749dfde5b0ef07677c7da 599 Gene3D G3DSA:3.40.390.10 379 421 8.1E-4 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VP1308 9aed2ec0ebd749dfde5b0ef07677c7da 599 Pfam PF01432 Peptidase family M3 337 580 7.7E-22 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VP0237 a426bd9979ebb6436ec7728bed315d24 292 Pfam PF00483 Nucleotidyl transferase 9 265 5.6E-31 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VP0237 a426bd9979ebb6436ec7728bed315d24 292 PANTHER PTHR22572 4 280 1.0E-99 T 22-04-2016 VP0237 a426bd9979ebb6436ec7728bed315d24 292 Gene3D G3DSA:3.90.550.10 3 271 1.0E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0237 a426bd9979ebb6436ec7728bed315d24 292 SUPERFAMILY SSF53448 2 269 6.68E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0237 a426bd9979ebb6436ec7728bed315d24 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 1.8E-123 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VP0237 a426bd9979ebb6436ec7728bed315d24 292 PANTHER PTHR22572:SF14 4 280 1.0E-99 T 22-04-2016 VP1168 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.7E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP1168 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Gene3D G3DSA:3.40.50.300 2 260 2.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1168 66b0d84e4f2a23df0429cbf3ce5e3c90 331 PANTHER PTHR24220 5 328 6.3E-204 T 22-04-2016 VP1168 66b0d84e4f2a23df0429cbf3ce5e3c90 331 SUPERFAMILY SSF52540 4 268 2.41E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1168 66b0d84e4f2a23df0429cbf3ce5e3c90 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.9E-21 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP1168 66b0d84e4f2a23df0429cbf3ce5e3c90 331 SMART SM00382 32 237 2.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1168 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Pfam PF00005 ABC transporter 24 187 7.8E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1168 66b0d84e4f2a23df0429cbf3ce5e3c90 331 PANTHER PTHR24220:SF514 5 328 6.3E-204 T 22-04-2016 VP1613 64ce2784ad07c75b6d9f4277eb69d1e6 277 Pfam PF13509 S1 domain 4 63 1.0E-23 T 22-04-2016 VP1613 64ce2784ad07c75b6d9f4277eb69d1e6 277 PANTHER PTHR37296 1 277 4.2E-112 T 22-04-2016 VP1613 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 3 64 14.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP1613 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 69 132 6.4 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP1613 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 145 207 0.14 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP1613 64ce2784ad07c75b6d9f4277eb69d1e6 277 PIRSF PIRSF012524 1 277 1.6E-98 T 22-04-2016 IPR014464 Conserved virulence factor B VP2633 d4233941f3a89487cd5d58826824bcd0 251 Gene3D G3DSA:3.20.20.370 1 242 3.9E-73 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VP2633 d4233941f3a89487cd5d58826824bcd0 251 PANTHER PTHR31609 1 251 1.2E-65 T 22-04-2016 VP2633 d4233941f3a89487cd5d58826824bcd0 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 40.275 T 22-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VP2633 d4233941f3a89487cd5d58826824bcd0 251 Pfam PF04794 YdjC-like protein 2 230 2.3E-53 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like VP2633 d4233941f3a89487cd5d58826824bcd0 251 SUPERFAMILY SSF88713 1 242 2.07E-68 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VP1779 8ee21bf5be296db6da85bd012d94036e 248 Gene3D G3DSA:3.40.50.880 5 247 6.6E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1779 8ee21bf5be296db6da85bd012d94036e 248 Pfam PF07722 Peptidase C26 7 226 4.9E-70 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 VP1779 8ee21bf5be296db6da85bd012d94036e 248 PANTHER PTHR11922:SF18 28 248 5.9E-49 T 22-04-2016 VP1779 8ee21bf5be296db6da85bd012d94036e 248 SUPERFAMILY SSF52317 5 246 1.1E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1779 8ee21bf5be296db6da85bd012d94036e 248 PANTHER PTHR11922 28 248 5.9E-49 T 22-04-2016 VP2286 0e015b9f7c5099528c2625638f4d3785 215 PANTHER PTHR10520 1 194 3.0E-100 T 22-04-2016 VP2286 0e015b9f7c5099528c2625638f4d3785 215 Pfam PF00551 Formyl transferase 2 181 8.2E-62 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP2286 0e015b9f7c5099528c2625638f4d3785 215 Gene3D G3DSA:3.40.50.170 2 199 5.1E-69 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP2286 0e015b9f7c5099528c2625638f4d3785 215 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP2286 0e015b9f7c5099528c2625638f4d3785 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.597 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VP2286 0e015b9f7c5099528c2625638f4d3785 215 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 7.3E-77 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VP2286 0e015b9f7c5099528c2625638f4d3785 215 SUPERFAMILY SSF53328 2 202 7.72E-66 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP0546 8c6c48901df6ffdd023c720624e3d36e 357 SUPERFAMILY SSF51569 8 345 3.57E-138 T 22-04-2016 VP0546 8c6c48901df6ffdd023c720624e3d36e 357 PANTHER PTHR21225 1 348 5.5E-222 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VP0546 8c6c48901df6ffdd023c720624e3d36e 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 346 2.1E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VP0546 8c6c48901df6ffdd023c720624e3d36e 357 Gene3D G3DSA:3.20.20.70 11 349 6.5E-156 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0546 8c6c48901df6ffdd023c720624e3d36e 357 Pfam PF00793 DAHP synthetase I family 41 340 7.9E-105 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VP0546 8c6c48901df6ffdd023c720624e3d36e 357 PIRSF PIRSF001361 1 354 7.1E-164 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 Pfam PF00501 AMP-binding enzyme 14 466 2.9E-100 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 SUPERFAMILY SSF56801 7 285 1.57E-115 T 22-04-2016 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 SUPERFAMILY SSF56801 336 596 1.57E-115 T 22-04-2016 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 Gene3D G3DSA:3.40.50.980 8 188 2.9E-31 T 22-04-2016 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 PANTHER PTHR24096:SF193 8 600 3.2E-226 T 22-04-2016 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site VP0351 6e06c51f155672d4654df58b9b1cb05d 602 Gene3D G3DSA:3.40.50.980 189 280 2.6E-31 T 22-04-2016 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 Gene3D G3DSA:3.40.50.980 333 388 2.6E-31 T 22-04-2016 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 Gene3D G3DSA:2.30.38.10 401 460 7.5E-20 T 22-04-2016 VP0351 6e06c51f155672d4654df58b9b1cb05d 602 PANTHER PTHR24096 8 600 3.2E-226 T 22-04-2016 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 Pfam PF01039 Carboxyl transferase domain 100 240 5.2E-14 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 PANTHER PTHR22855:SF17 1 303 1.7E-179 T 22-04-2016 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 PANTHER PTHR22855 1 303 1.7E-179 T 22-04-2016 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 SUPERFAMILY SSF52096 25 282 2.27E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.517 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.4E-140 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2189 416a49d3cbb0d29977e4e7dd90b86a2d 308 Gene3D G3DSA:3.90.226.10 18 282 7.2E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP0587 341f7b2d28a54f21b28b480543bc76d1 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.018 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0587 341f7b2d28a54f21b28b480543bc76d1 350 Gene3D G3DSA:2.40.10.240 64 143 7.1E-19 T 22-04-2016 VP0587 341f7b2d28a54f21b28b480543bc76d1 350 SUPERFAMILY SSF111337 1 345 3.27E-138 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0587 341f7b2d28a54f21b28b480543bc76d1 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.1E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0587 341f7b2d28a54f21b28b480543bc76d1 350 PANTHER PTHR30307 2 345 6.6E-182 T 22-04-2016 VP0587 341f7b2d28a54f21b28b480543bc76d1 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 5.9E-160 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VP0587 341f7b2d28a54f21b28b480543bc76d1 350 Gene3D G3DSA:3.40.1780.10 1 62 5.5E-101 T 22-04-2016 VP0587 341f7b2d28a54f21b28b480543bc76d1 350 Gene3D G3DSA:3.40.1780.10 179 345 5.5E-101 T 22-04-2016 VP0587 341f7b2d28a54f21b28b480543bc76d1 350 PANTHER PTHR30307:SF0 2 345 6.6E-182 T 22-04-2016 VP2528 8ef38c4701eb4f9dfdc0533d134c2c93 246 SUPERFAMILY SSF160950 1 245 3.27E-94 T 22-04-2016 VP2528 8ef38c4701eb4f9dfdc0533d134c2c93 246 PANTHER PTHR39455:SF1 1 246 1.7E-109 T 22-04-2016 VP2528 8ef38c4701eb4f9dfdc0533d134c2c93 246 Gene3D G3DSA:2.60.440.10 173 245 3.1E-34 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain VP2528 8ef38c4701eb4f9dfdc0533d134c2c93 246 Pfam PF07072 Protein of unknown function (DUF1342) 18 224 4.6E-76 T 22-04-2016 IPR009777 Cell division protein ZapD VP2528 8ef38c4701eb4f9dfdc0533d134c2c93 246 PANTHER PTHR39455 1 246 1.7E-109 T 22-04-2016 VP2528 8ef38c4701eb4f9dfdc0533d134c2c93 246 Gene3D G3DSA:1.10.3900.10 12 172 1.9E-63 T 22-04-2016 VP2528 8ef38c4701eb4f9dfdc0533d134c2c93 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.881 T 22-04-2016 IPR009777 Cell division protein ZapD VP0746 9b95c481413a7ae4eb609efd6c885514 269 Pfam PF13371 Tetratricopeptide repeat 187 259 1.9E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0746 9b95c481413a7ae4eb609efd6c885514 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 3.7E-44 T 22-04-2016 IPR032698 Protein SirB1, N-terminal VP0746 9b95c481413a7ae4eb609efd6c885514 269 PANTHER PTHR31350 10 265 3.8E-48 T 22-04-2016 VP0746 9b95c481413a7ae4eb609efd6c885514 269 SUPERFAMILY SSF48452 191 255 2.76E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0746 9b95c481413a7ae4eb609efd6c885514 269 Gene3D G3DSA:1.25.40.10 183 250 1.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0746 9b95c481413a7ae4eb609efd6c885514 269 Gene3D G3DSA:1.25.40.10 32 48 1.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0327 aca169dde826229a57ac143cbe572581 333 Pfam PF00348 Polyprenyl synthetase 42 282 3.4E-71 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VP0327 aca169dde826229a57ac143cbe572581 333 PANTHER PTHR12001 5 333 6.8E-124 T 22-04-2016 IPR017446 Polyprenyl synthetase-related VP0327 aca169dde826229a57ac143cbe572581 333 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VP0327 aca169dde826229a57ac143cbe572581 333 SUPERFAMILY SSF48576 12 332 6.84E-99 T 22-04-2016 IPR008949 Isoprenoid synthase domain VP0327 aca169dde826229a57ac143cbe572581 333 PANTHER PTHR12001:SF47 5 333 6.8E-124 T 22-04-2016 VP0327 aca169dde826229a57ac143cbe572581 333 Gene3D G3DSA:1.10.600.10 12 332 4.3E-100 T 22-04-2016 IPR008949 Isoprenoid synthase domain VP0327 aca169dde826229a57ac143cbe572581 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 Gene3D G3DSA:3.90.1150.10 287 421 3.9E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 PANTHER PTHR11808:SF12 4 234 4.2E-241 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 PANTHER PTHR11808:SF12 264 422 4.2E-241 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 Gene3D G3DSA:3.40.640.10 2 285 1.1E-118 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 SUPERFAMILY SSF53383 1 421 6.65E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0629 b6f20daf5b1d680f4808ee078e72b197 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 1.2E-142 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 PIRSF PIRSF001434 1 422 2.5E-129 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 PANTHER PTHR11808 4 234 4.2E-241 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 PANTHER PTHR11808 264 422 4.2E-241 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VP0629 b6f20daf5b1d680f4808ee078e72b197 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 1.6E-200 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 VP1256 e71df806b050678167996e4108ccb53b 456 PANTHER PTHR10283 7 456 5.1E-129 T 22-04-2016 VP1256 e71df806b050678167996e4108ccb53b 456 PANTHER PTHR10283:SF82 7 456 5.1E-129 T 22-04-2016 VP1256 e71df806b050678167996e4108ccb53b 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 8.6E-109 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1256 e71df806b050678167996e4108ccb53b 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 37 456 3.7E-56 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP1256 e71df806b050678167996e4108ccb53b 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site VP2121 bbf96b81fc3521e656f2baa37947ec99 900 PIRSF PIRSF000111 1 865 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.605.10 2 225 9.5E-24 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 SUPERFAMILY SSF56796 452 863 2.49E-114 T 22-04-2016 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 PANTHER PTHR11496 361 866 0.0 T 22-04-2016 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 1.9E-25 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.50.1970 451 642 3.7E-59 T 22-04-2016 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.309.10 226 273 2.7E-27 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.309.10 309 405 2.7E-27 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 PANTHER PTHR11496:SF79 361 866 0.0 T 22-04-2016 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:1.20.1090.10 643 863 1.1E-67 T 22-04-2016 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 SUPERFAMILY SSF53720 5 454 1.7E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP2121 bbf96b81fc3521e656f2baa37947ec99 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 2.0E-111 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.5E-266 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 SUPERFAMILY SSF50249 1 105 2.48E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 PANTHER PTHR22594:SF5 370 571 3.6E-250 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 PANTHER PTHR22594:SF5 1 296 3.6E-250 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 Gene3D G3DSA:2.40.50.140 1 106 4.5E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.0E-104 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 7.2E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 SUPERFAMILY SSF55261 288 419 7.36E-47 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 Pfam PF02938 GAD domain 307 406 2.0E-30 T 22-04-2016 IPR029351 GAD domain VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 Gene3D G3DSA:3.30.1360.30 276 413 1.5E-46 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 Gene3D G3DSA:3.30.930.10 131 275 6.6E-110 T 22-04-2016 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 Gene3D G3DSA:3.30.930.10 414 584 6.6E-110 T 22-04-2016 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.794 T 22-04-2016 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 SUPERFAMILY SSF55681 420 583 2.49E-100 T 22-04-2016 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 SUPERFAMILY SSF55681 108 287 2.49E-100 T 22-04-2016 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 PANTHER PTHR22594 370 571 3.6E-250 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP1047 4f892c3ff025d67e3c4cac1ab4102f17 592 PANTHER PTHR22594 1 296 3.6E-250 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0285 608027e46e31b314321f241d1e5040aa 206 PANTHER PTHR10516 86 205 3.8E-63 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VP0285 608027e46e31b314321f241d1e5040aa 206 PANTHER PTHR10516 19 44 3.8E-63 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VP0285 608027e46e31b314321f241d1e5040aa 206 Gene3D G3DSA:1.10.287.460 3 92 5.1E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VP0285 608027e46e31b314321f241d1e5040aa 206 Gene3D G3DSA:3.10.50.40 93 205 8.4E-44 T 22-04-2016 VP0285 608027e46e31b314321f241d1e5040aa 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 2.1E-26 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VP0285 608027e46e31b314321f241d1e5040aa 206 PANTHER PTHR10516:SF320 86 205 3.8E-63 T 22-04-2016 VP0285 608027e46e31b314321f241d1e5040aa 206 PANTHER PTHR10516:SF320 19 44 3.8E-63 T 22-04-2016 VP0285 608027e46e31b314321f241d1e5040aa 206 SUPERFAMILY SSF54534 7 205 8.45E-54 T 22-04-2016 VP0285 608027e46e31b314321f241d1e5040aa 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 7.4E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VP1622 54612b39506a7782c6739d5f6ec874dd 368 Gene3D G3DSA:1.10.3720.10 155 363 4.4E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1622 54612b39506a7782c6739d5f6ec874dd 368 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 360 3.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1622 54612b39506a7782c6739d5f6ec874dd 368 SUPERFAMILY SSF161098 155 349 1.31E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1622 54612b39506a7782c6739d5f6ec874dd 368 PANTHER PTHR30085 63 368 1.2E-179 T 22-04-2016 VP1622 54612b39506a7782c6739d5f6ec874dd 368 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 254 6.3E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VP1622 54612b39506a7782c6739d5f6ec874dd 368 PANTHER PTHR30085:SF3 63 368 1.2E-179 T 22-04-2016 VP0597 a2db7c719c92a21cc79a780a133f6094 127 SUPERFAMILY SSF82649 1 125 4.97E-48 T 22-04-2016 VP0597 a2db7c719c92a21cc79a780a133f6094 127 PANTHER PTHR10093:SF3 1 127 2.6E-101 T 22-04-2016 VP0597 a2db7c719c92a21cc79a780a133f6094 127 Gene3D G3DSA:3.90.1010.10 2 126 2.1E-56 T 22-04-2016 VP0597 a2db7c719c92a21cc79a780a133f6094 127 Pfam PF01592 NifU-like N terminal domain 2 126 2.2E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 VP0597 a2db7c719c92a21cc79a780a133f6094 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.1E-69 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 VP0597 a2db7c719c92a21cc79a780a133f6094 127 PANTHER PTHR10093 1 127 2.6E-101 T 22-04-2016 VP2622 876aec4ae982d38ccdd48681c1726b0a 392 PANTHER PTHR13932 5 392 2.3E-221 T 22-04-2016 VP2622 876aec4ae982d38ccdd48681c1726b0a 392 PANTHER PTHR13932:SF7 5 392 2.3E-221 T 22-04-2016 VP2622 876aec4ae982d38ccdd48681c1726b0a 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.0E-136 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- VP2622 876aec4ae982d38ccdd48681c1726b0a 392 Gene3D G3DSA:3.80.30.20 7 242 3.1E-29 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VP2622 876aec4ae982d38ccdd48681c1726b0a 392 Pfam PF04055 Radical SAM superfamily 11 181 2.2E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP2622 876aec4ae982d38ccdd48681c1726b0a 392 SMART SM00729 6 227 2.0E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VP2622 876aec4ae982d38ccdd48681c1726b0a 392 SUPERFAMILY SSF102114 4 386 1.57E-111 T 22-04-2016 VP2622 876aec4ae982d38ccdd48681c1726b0a 392 Pfam PF06969 HemN C-terminal domain 314 374 1.0E-8 T 22-04-2016 IPR010723 HemN, C-terminal VP1094 e3f446281aacfc3dbdb076b9549f6629 329 PANTHER PTHR31752:SF13 109 325 7.1E-84 T 22-04-2016 VP1094 e3f446281aacfc3dbdb076b9549f6629 329 Pfam PF03547 Membrane transport protein 175 318 5.0E-14 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VP1094 e3f446281aacfc3dbdb076b9549f6629 329 PANTHER PTHR31752 109 325 7.1E-84 T 22-04-2016 VP1040 b64c9da87d887cfb722038c13faa78a1 322 Gene3D G3DSA:3.30.470.20 40 102 2.1E-6 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP1040 b64c9da87d887cfb722038c13faa78a1 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 21 294 1.3E-115 T 22-04-2016 VP1040 b64c9da87d887cfb722038c13faa78a1 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 320 3.3E-180 T 22-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein VP1040 b64c9da87d887cfb722038c13faa78a1 322 SUPERFAMILY SSF56059 36 186 7.69E-20 T 22-04-2016 VP1040 b64c9da87d887cfb722038c13faa78a1 322 SUPERFAMILY SSF56059 220 277 7.69E-20 T 22-04-2016 VP1040 b64c9da87d887cfb722038c13faa78a1 322 Gene3D G3DSA:3.30.470.20 162 202 3.5E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP1040 b64c9da87d887cfb722038c13faa78a1 322 Gene3D G3DSA:3.30.470.20 228 285 8.0E-6 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP2037 705982dda192e51a056d986c9438b480 317 Gene3D G3DSA:3.40.50.2300 183 311 1.7E-23 T 22-04-2016 VP2037 705982dda192e51a056d986c9438b480 317 Gene3D G3DSA:2.40.50.180 60 107 3.6E-6 T 22-04-2016 VP2037 705982dda192e51a056d986c9438b480 317 PANTHER PTHR22617 1 174 6.8E-85 T 22-04-2016 VP2037 705982dda192e51a056d986c9438b480 317 SMART SM00260 17 158 9.8E-26 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2037 705982dda192e51a056d986c9438b480 317 Pfam PF00072 Response regulator receiver domain 186 303 5.7E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2037 705982dda192e51a056d986c9438b480 317 Pfam PF01584 CheW-like domain 21 160 1.6E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2037 705982dda192e51a056d986c9438b480 317 SUPERFAMILY SSF50341 16 163 6.8E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2037 705982dda192e51a056d986c9438b480 317 PIRSF PIRSF002867 1 313 1.4E-106 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV VP2037 705982dda192e51a056d986c9438b480 317 SUPERFAMILY SSF52172 183 311 3.84E-21 T 22-04-2016 IPR011006 CheY-like superfamily VP2037 705982dda192e51a056d986c9438b480 317 SMART SM00448 184 305 1.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2037 705982dda192e51a056d986c9438b480 317 PANTHER PTHR22617:SF37 1 174 6.8E-85 T 22-04-2016 VP2535 6c8392dd3201ac22e233d59fdc5620cf 264 Pfam PF01578 Cytochrome C assembly protein 39 262 1.2E-45 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VP2535 6c8392dd3201ac22e233d59fdc5620cf 264 PANTHER PTHR38034 3 264 6.8E-98 T 22-04-2016 VP0441 1e27d5550c8736079953e2adabe004c7 196 Gene3D G3DSA:2.102.10.10 9 191 3.8E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VP0441 1e27d5550c8736079953e2adabe004c7 196 PANTHER PTHR10134:SF8 1 194 1.2E-114 T 22-04-2016 VP0441 1e27d5550c8736079953e2adabe004c7 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 2.4E-74 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VP0441 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VP0441 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VP0441 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VP0441 1e27d5550c8736079953e2adabe004c7 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 40 1.8E-14 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VP0441 1e27d5550c8736079953e2adabe004c7 196 SUPERFAMILY SSF50022 30 189 7.26E-43 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VP0441 1e27d5550c8736079953e2adabe004c7 196 PANTHER PTHR10134 1 194 1.2E-114 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 VP0441 1e27d5550c8736079953e2adabe004c7 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 2.6E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VP1344 5f449b4bbb51dc37cca9466984126ec3 368 SMART SM00382 71 269 3.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1344 5f449b4bbb51dc37cca9466984126ec3 368 PANTHER PTHR24220:SF535 44 361 1.1E-146 T 22-04-2016 VP1344 5f449b4bbb51dc37cca9466984126ec3 368 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 271 335 1.9E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP1344 5f449b4bbb51dc37cca9466984126ec3 368 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 271 354 3.6E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP1344 5f449b4bbb51dc37cca9466984126ec3 368 SUPERFAMILY SSF52540 42 290 3.06E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1344 5f449b4bbb51dc37cca9466984126ec3 368 ProSitePatterns PS00211 ABC transporters family signature. 192 206 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1344 5f449b4bbb51dc37cca9466984126ec3 368 PANTHER PTHR24220 44 361 1.1E-146 T 22-04-2016 VP1344 5f449b4bbb51dc37cca9466984126ec3 368 Gene3D G3DSA:3.40.50.300 41 293 6.0E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1344 5f449b4bbb51dc37cca9466984126ec3 368 Pfam PF00005 ABC transporter 63 219 1.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PANTHER PTHR24322 10 134 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PANTHER PTHR24322 150 181 1.3E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 Gene3D G3DSA:3.40.50.720 1 243 4.8E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 SUPERFAMILY SSF51735 1 260 9.09E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 5.5E-5 T 22-04-2016 VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PANTHER PTHR24322:SF513 10 134 1.3E-35 T 22-04-2016 VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 PANTHER PTHR24322:SF513 150 181 1.3E-35 T 22-04-2016 VP1732 1f8ef9d196cb2739210a94bebb4a65e4 264 Pfam PF00106 short chain dehydrogenase 7 193 3.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1286 99f0aa8b774988fe8df943f88fcc9821 793 PANTHER PTHR33406:SF2 121 771 5.5E-59 T 22-04-2016 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 SUPERFAMILY SSF82866 617 769 1.28E-33 T 22-04-2016 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 PANTHER PTHR33406 5 104 5.5E-59 T 22-04-2016 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 PANTHER PTHR33406:SF2 5 104 5.5E-59 T 22-04-2016 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 PANTHER PTHR33406 121 771 5.5E-59 T 22-04-2016 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 Gene3D G3DSA:1.20.1640.10 184 384 3.0E-30 T 22-04-2016 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 Gene3D G3DSA:1.20.1640.10 574 777 2.9E-33 T 22-04-2016 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 Pfam PF03176 MMPL family 63 385 1.8E-21 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 Pfam PF03176 MMPL family 589 770 2.4E-14 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VP1286 99f0aa8b774988fe8df943f88fcc9821 793 SUPERFAMILY SSF82866 160 383 4.58E-30 T 22-04-2016 VP2474 b5449d876a7c84697062bb6ffc8407b9 113 Gene3D G3DSA:2.60.300.12 5 99 7.4E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis VP2474 b5449d876a7c84697062bb6ffc8407b9 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.1E-36 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VP2474 b5449d876a7c84697062bb6ffc8407b9 113 SUPERFAMILY SSF89360 8 102 1.16E-29 T 22-04-2016 IPR000361 FeS cluster biogenesis VP2474 b5449d876a7c84697062bb6ffc8407b9 113 PANTHER PTHR10072 8 113 1.1E-45 T 22-04-2016 VP2474 b5449d876a7c84697062bb6ffc8407b9 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.7E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis VP2474 b5449d876a7c84697062bb6ffc8407b9 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VP2474 b5449d876a7c84697062bb6ffc8407b9 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.874 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 VP1452 68a461ff2259c42a166c87dc91282894 194 PANTHER PTHR10204:SF16 1 194 1.1E-88 T 22-04-2016 VP1452 68a461ff2259c42a166c87dc91282894 194 SUPERFAMILY SSF52218 1 192 1.53E-50 T 22-04-2016 IPR029039 Flavoprotein-like domain VP1452 68a461ff2259c42a166c87dc91282894 194 PANTHER PTHR10204 1 194 1.1E-88 T 22-04-2016 VP1452 68a461ff2259c42a166c87dc91282894 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.722 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VP1452 68a461ff2259c42a166c87dc91282894 194 Pfam PF02525 Flavodoxin-like fold 3 190 2.9E-43 T 22-04-2016 IPR003680 Flavodoxin-like fold VP1452 68a461ff2259c42a166c87dc91282894 194 Gene3D G3DSA:3.40.50.360 1 193 8.9E-64 T 22-04-2016 IPR029039 Flavoprotein-like domain VP0444 35f1214898f8f23a3376a9da8f6b471a 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0444 35f1214898f8f23a3376a9da8f6b471a 211 SUPERFAMILY SSF47616 82 208 1.34E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VP0444 35f1214898f8f23a3376a9da8f6b471a 211 Gene3D G3DSA:1.20.1050.10 101 208 6.9E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VP0444 35f1214898f8f23a3376a9da8f6b471a 211 PANTHER PTHR11260 9 210 4.8E-120 T 22-04-2016 VP0444 35f1214898f8f23a3376a9da8f6b471a 211 PANTHER PTHR11260:SF44 9 210 4.8E-120 T 22-04-2016 VP0444 35f1214898f8f23a3376a9da8f6b471a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VP0444 35f1214898f8f23a3376a9da8f6b471a 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.1E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal VP0444 35f1214898f8f23a3376a9da8f6b471a 211 Gene3D G3DSA:3.40.30.10 7 100 6.4E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0334 624b0007dcc448b1d7971d744ef53f04 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 7.3E-118 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VP0334 624b0007dcc448b1d7971d744ef53f04 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 143 2.8E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VP0334 624b0007dcc448b1d7971d744ef53f04 268 Gene3D G3DSA:3.60.21.10 167 265 5.3E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0334 624b0007dcc448b1d7971d744ef53f04 268 Gene3D G3DSA:3.60.21.10 3 130 5.3E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0334 624b0007dcc448b1d7971d744ef53f04 268 SUPERFAMILY SSF56300 3 252 2.28E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0334 624b0007dcc448b1d7971d744ef53f04 268 PANTHER PTHR24032 2 264 3.5E-139 T 22-04-2016 VP0334 624b0007dcc448b1d7971d744ef53f04 268 PIRSF PIRSF000903 1 268 1.4E-121 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VP0334 624b0007dcc448b1d7971d744ef53f04 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 46.832 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VP0334 624b0007dcc448b1d7971d744ef53f04 268 PANTHER PTHR24032:SF27 2 264 3.5E-139 T 22-04-2016 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.297 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 9.1E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 SUPERFAMILY SSF50104 2 115 1.81E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 PANTHER PTHR15680 1 117 2.2E-56 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 Pfam PF01245 Ribosomal protein L19 3 113 4.2E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 PIRSF PIRSF002191 1 117 3.8E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.7E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.7E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2530 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.7E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2455 b56faf693d6bb4214387811b73ef11eb 131 Gene3D G3DSA:3.30.300.20 4 119 6.2E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VP2455 b56faf693d6bb4214387811b73ef11eb 131 SUPERFAMILY SSF89919 2 105 4.32E-32 T 22-04-2016 IPR023799 Ribosome-binding factor A domain VP2455 b56faf693d6bb4214387811b73ef11eb 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 21.297 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VP2455 b56faf693d6bb4214387811b73ef11eb 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 1.8E-35 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VP2455 b56faf693d6bb4214387811b73ef11eb 131 PANTHER PTHR33515 1 131 1.8E-47 T 22-04-2016 VP2455 b56faf693d6bb4214387811b73ef11eb 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 2.0E-47 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VP2455 b56faf693d6bb4214387811b73ef11eb 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VP2455 b56faf693d6bb4214387811b73ef11eb 131 Pfam PF02033 Ribosome-binding factor A 7 110 3.7E-30 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 Pfam PF00245 Alkaline phosphatase 26 503 4.8E-83 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 Gene3D G3DSA:3.40.720.10 466 523 4.7E-141 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 Gene3D G3DSA:3.40.720.10 413 414 4.7E-141 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 Gene3D G3DSA:3.40.720.10 8 373 4.7E-141 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PANTHER PTHR11596 424 439 2.5E-106 T 22-04-2016 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PANTHER PTHR11596 13 389 2.5E-106 T 22-04-2016 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PANTHER PTHR11596 475 502 2.5E-106 T 22-04-2016 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 SMART SM00098 27 437 3.3E-53 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PANTHER PTHR11596:SF5 424 439 2.5E-106 T 22-04-2016 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PANTHER PTHR11596:SF5 13 389 2.5E-106 T 22-04-2016 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PANTHER PTHR11596:SF5 475 502 2.5E-106 T 22-04-2016 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 SUPERFAMILY SSF53649 9 401 4.04E-113 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 SUPERFAMILY SSF53649 466 505 4.04E-113 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VP2163 9ff86031ccd2eb4c692790fe44ef7d4e 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 129 401 3.0E-115 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 PANTHER PTHR11564 96 405 1.8E-151 T 22-04-2016 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 375 388 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 129 402 65.155 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 Gene3D G3DSA:3.40.50.300 198 402 8.0E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 Gene3D G3DSA:1.20.120.140 92 182 6.9E-34 T 22-04-2016 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 SUPERFAMILY SSF47364 101 180 1.57E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 SMART SM00962 201 402 2.9E-123 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 SMART SM00382 200 392 7.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 PANTHER PTHR11564:SF16 96 405 1.8E-151 T 22-04-2016 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 Pfam PF02881 SRP54-type protein, helical bundle domain 121 182 1.6E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 Pfam PF00448 SRP54-type protein, GTPase domain 202 401 2.8E-77 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 SMART SM00963 106 186 2.7E-27 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VP2956 6b8ddbdf7f950803bb9eefb921be3f12 405 SUPERFAMILY SSF52540 199 402 8.13E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1962 a739941ae76ce02849f97326448dfae8 230 SMART SM00419 170 218 5.4E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP1962 a739941ae76ce02849f97326448dfae8 230 Gene3D G3DSA:1.10.10.10 149 219 1.5E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1962 a739941ae76ce02849f97326448dfae8 230 SUPERFAMILY SSF46785 149 225 5.97E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1962 a739941ae76ce02849f97326448dfae8 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 2.4E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP1962 a739941ae76ce02849f97326448dfae8 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 2.4E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP1962 a739941ae76ce02849f97326448dfae8 230 PANTHER PTHR24567 1 225 2.5E-38 T 22-04-2016 VP1962 a739941ae76ce02849f97326448dfae8 230 Pfam PF00027 Cyclic nucleotide-binding domain 32 119 2.4E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1962 a739941ae76ce02849f97326448dfae8 230 Pfam PF13545 Crp-like helix-turn-helix domain 151 225 3.2E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VP1962 a739941ae76ce02849f97326448dfae8 230 SMART SM00100 13 131 2.5E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1962 a739941ae76ce02849f97326448dfae8 230 Gene3D G3DSA:2.60.120.10 10 143 5.9E-25 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1962 a739941ae76ce02849f97326448dfae8 230 SUPERFAMILY SSF51206 1 142 1.26E-26 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP2194 b877593ce5c9f069bb1f371b15bc6378 403 SUPERFAMILY SSF53901 1 251 4.32E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2194 b877593ce5c9f069bb1f371b15bc6378 403 SUPERFAMILY SSF53901 213 401 1.38E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2194 b877593ce5c9f069bb1f371b15bc6378 403 Gene3D G3DSA:3.40.47.10 261 402 9.0E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2194 b877593ce5c9f069bb1f371b15bc6378 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.0E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VP2194 b877593ce5c9f069bb1f371b15bc6378 403 PANTHER PTHR11712 1 401 6.6E-176 T 22-04-2016 VP2194 b877593ce5c9f069bb1f371b15bc6378 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 1.3E-27 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VP2194 b877593ce5c9f069bb1f371b15bc6378 403 Gene3D G3DSA:3.40.47.10 6 257 8.6E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2194 b877593ce5c9f069bb1f371b15bc6378 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VP2194 b877593ce5c9f069bb1f371b15bc6378 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.2E-46 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VP0183 015abced309de547cffedd5ca6aafc26 557 PANTHER PTHR32089:SF55 66 557 7.7E-197 T 22-04-2016 VP0183 015abced309de547cffedd5ca6aafc26 557 SMART SM01049 44 133 9.5E-32 T 22-04-2016 IPR033480 Single Cache domain 2 VP0183 015abced309de547cffedd5ca6aafc26 557 Gene3D G3DSA:1.10.287.950 313 527 5.6E-56 T 22-04-2016 VP0183 015abced309de547cffedd5ca6aafc26 557 SMART SM00304 226 280 1.8E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0183 015abced309de547cffedd5ca6aafc26 557 Pfam PF00672 HAMP domain 207 276 5.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0183 015abced309de547cffedd5ca6aafc26 557 Gene3D G3DSA:3.30.450.20 42 185 2.7E-47 T 22-04-2016 VP0183 015abced309de547cffedd5ca6aafc26 557 SUPERFAMILY SSF58104 248 557 7.32E-74 T 22-04-2016 VP0183 015abced309de547cffedd5ca6aafc26 557 Pfam PF17200 Single Cache domain 2 47 189 1.8E-38 T 22-04-2016 IPR033480 Single Cache domain 2 VP0183 015abced309de547cffedd5ca6aafc26 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 555 4.3E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP0183 015abced309de547cffedd5ca6aafc26 557 PANTHER PTHR32089 66 557 7.7E-197 T 22-04-2016 VP0183 015abced309de547cffedd5ca6aafc26 557 SMART SM00283 295 556 4.1E-59 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1473 5b910221ec5a4f6acfff8b3de8784182 228 PANTHER PTHR32309:SF13 12 187 1.2E-13 T 22-04-2016 VP1473 5b910221ec5a4f6acfff8b3de8784182 228 SUPERFAMILY SSF52540 23 198 1.09E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1473 5b910221ec5a4f6acfff8b3de8784182 228 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 210 2.1E-9 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VP1473 5b910221ec5a4f6acfff8b3de8784182 228 PANTHER PTHR32309 12 187 1.2E-13 T 22-04-2016 VP1473 5b910221ec5a4f6acfff8b3de8784182 228 Gene3D G3DSA:3.40.50.300 24 202 4.0E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 PANTHER PTHR11956:SF1 1 577 8.2E-263 T 22-04-2016 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF47323 455 577 2.68E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.5E-162 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.2E-20 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 SMART SM01016 5 87 2.0E-28 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:1.10.730.10 455 577 3.4E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 SMART SM00836 461 577 7.9E-43 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF55190 2 96 3.66E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:3.40.50.620 110 454 3.8E-112 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 6.8E-200 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF52374 110 454 4.3E-94 T 22-04-2016 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 PANTHER PTHR11956 1 577 8.2E-263 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF05746 DALR anticodon binding domain 461 577 4.0E-37 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:3.30.1360.70 2 105 5.7E-34 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP0861 c18cbc177800c78aff74d8d9e46f4e0f 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.167 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VP2201 77888cfd9b143a6371a43b3c8130f0a5 207 PANTHER PTHR30506 1 207 1.2E-120 T 22-04-2016 VP2201 77888cfd9b143a6371a43b3c8130f0a5 207 PANTHER PTHR30506:SF2 1 207 1.2E-120 T 22-04-2016 VP2201 77888cfd9b143a6371a43b3c8130f0a5 207 Pfam PF03458 UPF0126 domain 5 76 5.2E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VP2201 77888cfd9b143a6371a43b3c8130f0a5 207 Pfam PF03458 UPF0126 domain 92 163 2.0E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VP1672 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 PANTHER PTHR30587 4 216 1.4E-133 T 22-04-2016 VP1672 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 Pfam PF00813 FliP family 14 211 2.3E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VP1672 92aec7af3383600929b50355a563740c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 8.3E-92 T 22-04-2016 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 VP1672 92aec7af3383600929b50355a563740c 216 PANTHER PTHR30587:SF2 4 216 1.4E-133 T 22-04-2016 VP3046 95f947c1cc032d553bb1d0878d8d71a4 481 PIRSF PIRSF006247 1 481 5.3E-166 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VP3046 95f947c1cc032d553bb1d0878d8d71a4 481 PANTHER PTHR32024 1 481 3.1E-303 T 22-04-2016 VP3046 95f947c1cc032d553bb1d0878d8d71a4 481 PANTHER PTHR32024:SF3 1 481 3.1E-303 T 22-04-2016 VP3046 95f947c1cc032d553bb1d0878d8d71a4 481 Pfam PF02386 Cation transport protein 51 475 2.5E-49 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VP3046 95f947c1cc032d553bb1d0878d8d71a4 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.0E-114 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VP2623 3a846422e96727413e6a62ceb80c1de5 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.6E-130 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VP2623 3a846422e96727413e6a62ceb80c1de5 306 Pfam PF04960 Glutaminase 22 306 1.0E-113 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VP2623 3a846422e96727413e6a62ceb80c1de5 306 Gene3D G3DSA:3.40.710.10 2 306 5.6E-125 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2623 3a846422e96727413e6a62ceb80c1de5 306 PANTHER PTHR12544 6 306 6.7E-158 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VP2623 3a846422e96727413e6a62ceb80c1de5 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.208 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VP2623 3a846422e96727413e6a62ceb80c1de5 306 SUPERFAMILY SSF56601 4 306 4.07E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2105 2f9039b184410f78be2b864bf6c17e21 348 PANTHER PTHR30578:SF0 1 348 7.2E-146 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VP2105 2f9039b184410f78be2b864bf6c17e21 348 PANTHER PTHR30578 1 348 7.2E-146 T 22-04-2016 VP2105 2f9039b184410f78be2b864bf6c17e21 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.2E-138 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VP2105 2f9039b184410f78be2b864bf6c17e21 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.2E-106 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VP2105 2f9039b184410f78be2b864bf6c17e21 348 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 348 27.4 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 Gene3D G3DSA:1.10.8.60 167 242 2.8E-31 T 22-04-2016 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 492 568 7.1E-23 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.5E-132 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 Gene3D G3DSA:3.40.50.300 15 166 9.9E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 SMART SM00382 37 179 1.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 SUPERFAMILY SSF52540 32 222 3.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 Pfam PF13177 DNA polymerase III, delta subunit 20 178 7.1E-44 T 22-04-2016 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 PANTHER PTHR11669:SF0 1 439 3.2E-178 T 22-04-2016 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 Gene3D G3DSA:1.20.272.10 243 360 1.9E-44 T 22-04-2016 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 6.0E-32 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 570 708 1.7E-50 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 PANTHER PTHR11669 1 439 3.2E-178 T 22-04-2016 VP2179 67a3712d4c35d0e36e9537a0634bd1fb 711 SUPERFAMILY SSF48019 243 360 2.55E-32 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 SUPERFAMILY SSF52317 1042 1300 9.36E-100 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 Gene3D G3DSA:3.40.50.880 1047 1270 9.9E-14 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1302 21.301 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 SUPERFAMILY SSF56042 432 615 2.99E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 SUPERFAMILY SSF55326 221 428 7.32E-66 T 22-04-2016 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1046 1299 1.1E-106 T 22-04-2016 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 SUPERFAMILY SSF55326 619 816 2.62E-68 T 22-04-2016 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 SUPERFAMILY SSF82697 1 150 1.73E-49 T 22-04-2016 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 PANTHER PTHR10099 1 1302 0.0 T 22-04-2016 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 SUPERFAMILY SSF56042 830 1040 1.08E-55 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1300 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 Gene3D G3DSA:3.30.1330.10 645 810 3.5E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 Gene3D G3DSA:3.30.1330.10 211 422 1.7E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 SUPERFAMILY SSF109736 155 220 1.2E-21 T 22-04-2016 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 Pfam PF02769 AIR synthase related protein, C-terminal domain 840 971 3.1E-14 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 3.3E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 SMART SM01211 1046 1301 8.8E-159 T 22-04-2016 VP0666 bf59bffa23ec5d9c2768896eee536c2a 1302 PANTHER PTHR10099:SF5 1 1302 0.0 T 22-04-2016 VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 SMART SM00100 17 134 2.2E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 1.0E-48 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 SUPERFAMILY SSF51206 7 135 8.25E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 SMART SM00116 159 215 9.1E-5 T 22-04-2016 IPR000644 CBS domain VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 SMART SM00116 232 279 1.6E-4 T 22-04-2016 IPR000644 CBS domain VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 SUPERFAMILY SSF54631 146 278 2.15E-29 T 22-04-2016 VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 Gene3D G3DSA:3.10.580.10 151 280 1.4E-31 T 22-04-2016 VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 2.6E-44 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 PANTHER PTHR11911 134 453 1.6E-40 T 22-04-2016 VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.0E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 Pfam PF00571 CBS domain 153 211 6.9E-10 T 22-04-2016 IPR000644 CBS domain VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 Pfam PF00571 CBS domain 225 277 4.1E-11 T 22-04-2016 IPR000644 CBS domain VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 Gene3D G3DSA:2.60.120.10 7 134 1.1E-22 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1725 fe8b661361c27bb9f51156b0a83fcb1d 626 PANTHER PTHR11911:SF110 134 453 1.6E-40 T 22-04-2016 VP0336 5b85aac706a389ac7ecb564daf975a52 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VP0336 5b85aac706a389ac7ecb564daf975a52 269 SMART SM00650 25 197 4.9E-89 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VP0336 5b85aac706a389ac7ecb564daf975a52 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 3.0E-77 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VP0336 5b85aac706a389ac7ecb564daf975a52 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.427 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VP0336 5b85aac706a389ac7ecb564daf975a52 269 SUPERFAMILY SSF53335 8 267 8.92E-80 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0336 5b85aac706a389ac7ecb564daf975a52 269 Gene3D G3DSA:1.10.8.100 201 265 3.5E-24 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like VP0336 5b85aac706a389ac7ecb564daf975a52 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 5.4E-88 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VP0336 5b85aac706a389ac7ecb564daf975a52 269 Gene3D G3DSA:3.40.50.150 8 197 1.2E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0336 5b85aac706a389ac7ecb564daf975a52 269 PANTHER PTHR11727 8 269 2.2E-100 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VP2187 08b1c43924d79b6de00f8928319edbd5 202 Pfam PF05036 Sporulation related domain 126 194 7.5E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP2187 08b1c43924d79b6de00f8928319edbd5 202 Gene3D G3DSA:3.30.70.1070 120 199 5.5E-22 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP2187 08b1c43924d79b6de00f8928319edbd5 202 SUPERFAMILY SSF110997 125 198 2.62E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP2187 08b1c43924d79b6de00f8928319edbd5 202 PANTHER PTHR38687 2 202 2.8E-46 T 22-04-2016 VP2187 08b1c43924d79b6de00f8928319edbd5 202 PANTHER PTHR38687:SF1 2 202 2.8E-46 T 22-04-2016 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF55681 3 254 1.34E-108 T 22-04-2016 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF50447 454 551 1.38E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.1E-224 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 2.9E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 PANTHER PTHR11777:SF9 1 860 0.0 T 22-04-2016 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 SMART SM00863 652 695 1.4E-22 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF55186 551 710 7.19E-54 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF02272 DHHA1 domain 786 852 2.7E-17 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.855 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 PANTHER PTHR11777 1 860 0.0 T 22-04-2016 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 Gene3D G3DSA:3.30.930.10 3 251 6.0E-124 T 22-04-2016 VP2548 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF101353 255 460 4.45E-60 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VP0148 5e7575ab23a86f6e0f4694f54cb5dc03 261 SUPERFAMILY SSF53474 9 258 3.48E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0148 5e7575ab23a86f6e0f4694f54cb5dc03 261 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 260 44.913 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VP0148 5e7575ab23a86f6e0f4694f54cb5dc03 261 PANTHER PTHR10992 3 261 5.7E-107 T 22-04-2016 VP0148 5e7575ab23a86f6e0f4694f54cb5dc03 261 PANTHER PTHR10992:SF812 3 261 5.7E-107 T 22-04-2016 VP0148 5e7575ab23a86f6e0f4694f54cb5dc03 261 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 259 4.3E-102 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VP0148 5e7575ab23a86f6e0f4694f54cb5dc03 261 Pfam PF00561 alpha/beta hydrolase fold 22 247 5.7E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0148 5e7575ab23a86f6e0f4694f54cb5dc03 261 Gene3D G3DSA:3.40.50.1820 9 260 1.2E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1301 3c169d7d3a8a7a9d3c7a5d3b91494982 473 SMART SM00479 8 201 0.0046 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP1301 3c169d7d3a8a7a9d3c7a5d3b91494982 473 SUPERFAMILY SSF53098 7 471 4.69E-138 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1301 3c169d7d3a8a7a9d3c7a5d3b91494982 473 PANTHER PTHR11046 3 472 6.6E-275 T 22-04-2016 VP1301 3c169d7d3a8a7a9d3c7a5d3b91494982 473 PIRSF PIRSF000977 1 473 2.7E-196 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VP1301 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Gene3D G3DSA:3.30.420.10 2 197 6.0E-83 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1301 3c169d7d3a8a7a9d3c7a5d3b91494982 473 PANTHER PTHR11046:SF2 3 472 6.6E-275 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VP1301 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Pfam PF08411 Exonuclease C-terminal 210 469 1.1E-103 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 VP1301 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Pfam PF00929 Exonuclease 11 190 3.1E-23 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:1.10.486.10 383 516 2.4E-41 T 22-04-2016 VP0041 caf78b231f249f54d5a0e1a69d983eed 671 SUPERFAMILY SSF52540 1 640 3.87E-163 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.995 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.6E-73 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 8.6E-78 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 182 279 5.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 2 104 5.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:1.10.10.160 108 181 3.4E-26 T 22-04-2016 IPR013986 DExx box DNA helicase domain VP0041 caf78b231f249f54d5a0e1a69d983eed 671 PANTHER PTHR11070:SF19 1 669 0.0 T 22-04-2016 VP0041 caf78b231f249f54d5a0e1a69d983eed 671 PANTHER PTHR11070 1 669 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 280 382 2.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0041 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 552 641 2.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0041 caf78b231f249f54d5a0e1a69d983eed 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VP0699 76121ce04650abf35193cf51872cc915 521 SMART SM00267 351 521 8.6E-34 T 22-04-2016 IPR000160 GGDEF domain VP0699 76121ce04650abf35193cf51872cc915 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 1.1E-34 T 22-04-2016 IPR000160 GGDEF domain VP0699 76121ce04650abf35193cf51872cc915 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 519 1.8E-35 T 22-04-2016 IPR000160 GGDEF domain VP0699 76121ce04650abf35193cf51872cc915 521 SUPERFAMILY SSF55073 366 518 2.35E-34 T 22-04-2016 IPR029787 Nucleotide cyclase VP0699 76121ce04650abf35193cf51872cc915 521 Gene3D G3DSA:3.30.70.270 364 519 6.7E-39 T 22-04-2016 VP2351 5050c4a5cc99484cb90466ca72db3c25 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 2.4E-205 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VP2351 5050c4a5cc99484cb90466ca72db3c25 446 PANTHER PTHR37839 1 446 5.7E-221 T 22-04-2016 VP2351 5050c4a5cc99484cb90466ca72db3c25 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.523 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VP2351 5050c4a5cc99484cb90466ca72db3c25 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 2.2E-113 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VP2351 5050c4a5cc99484cb90466ca72db3c25 446 PANTHER PTHR37839:SF1 1 446 5.7E-221 T 22-04-2016 VP2351 5050c4a5cc99484cb90466ca72db3c25 446 Pfam PF11973 NQRA C-terminal domain 261 310 1.7E-21 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VP2798 aebb3db6967e296622035483a0402c8b 195 PANTHER PTHR11922:SF7 1 195 4.7E-94 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 SUPERFAMILY SSF52317 1 191 1.65E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.8E-85 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP2798 aebb3db6967e296622035483a0402c8b 195 Gene3D G3DSA:3.40.50.880 2 191 7.5E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PANTHER PTHR11922 1 195 4.7E-94 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.4E-5 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.4E-5 T 22-04-2016 VP2798 aebb3db6967e296622035483a0402c8b 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 5.2E-54 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VP0730 64b5a714d0d24aa0c35845b8358230f4 299 PANTHER PTHR22777 28 291 9.7E-115 T 22-04-2016 VP0730 64b5a714d0d24aa0c35845b8358230f4 299 SUPERFAMILY SSF56176 209 291 3.27E-23 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VP0730 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM01091 211 289 2.4E-30 T 22-04-2016 IPR005170 Transporter-associated domain VP0730 64b5a714d0d24aa0c35845b8358230f4 299 Gene3D G3DSA:3.30.465.10 204 290 8.0E-30 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VP0730 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF00571 CBS domain 75 132 1.6E-8 T 22-04-2016 IPR000644 CBS domain VP0730 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF00571 CBS domain 145 195 1.5E-6 T 22-04-2016 IPR000644 CBS domain VP0730 64b5a714d0d24aa0c35845b8358230f4 299 PANTHER PTHR22777:SF17 28 291 9.7E-115 T 22-04-2016 VP0730 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM00116 147 195 0.028 T 22-04-2016 IPR000644 CBS domain VP0730 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM00116 84 133 0.0024 T 22-04-2016 IPR000644 CBS domain VP0730 64b5a714d0d24aa0c35845b8358230f4 299 Gene3D G3DSA:3.10.580.10 61 203 3.2E-25 T 22-04-2016 VP0730 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF03471 Transporter associated domain 212 287 3.1E-22 T 22-04-2016 IPR005170 Transporter-associated domain VP0730 64b5a714d0d24aa0c35845b8358230f4 299 SUPERFAMILY SSF54631 65 206 9.1E-34 T 22-04-2016 VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 SUPERFAMILY SSF141868 600 846 2.09E-80 T 22-04-2016 IPR001633 EAL domain VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 Pfam PF00563 EAL domain 600 834 1.6E-68 T 22-04-2016 IPR001633 EAL domain VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 Pfam PF02743 Cache domain 47 260 7.0E-24 T 22-04-2016 IPR033479 Double Cache domain 1 VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 Gene3D G3DSA:3.20.20.450 595 844 3.9E-85 T 22-04-2016 IPR001633 EAL domain VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 SUPERFAMILY SSF55073 432 584 1.96E-32 T 22-04-2016 IPR029787 Nucleotide cyclase VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 Pfam PF00672 HAMP domain 349 417 1.7E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 SMART SM00304 368 421 1.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 573 3.7E-24 T 22-04-2016 IPR000160 GGDEF domain VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 Gene3D G3DSA:3.30.450.20 84 219 1.9E-21 T 22-04-2016 VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 574 1.2E-28 T 22-04-2016 IPR000160 GGDEF domain VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 PANTHER PTHR33121 479 848 2.6E-81 T 22-04-2016 VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 SMART SM00267 416 582 1.6E-30 T 22-04-2016 IPR000160 GGDEF domain VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 SUPERFAMILY SSF158472 369 418 2.48E-8 T 22-04-2016 VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 Gene3D G3DSA:3.30.70.270 429 587 1.4E-33 T 22-04-2016 VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 SMART SM00052 592 839 5.9E-98 T 22-04-2016 IPR001633 EAL domain VP0117 47d33d0cb1dbd3d1e7c88fb76b537db6 848 PANTHER PTHR33121:SF13 479 848 2.6E-81 T 22-04-2016 VP1551 3602c58cfb4859bb9d858b8428deafbd 402 Pfam PF02486 Replication initiation factor 203 380 4.3E-30 T 22-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 VP1933 0978cbfc48bd1de3fdabefababc8c190 235 Gene3D G3DSA:3.40.50.150 23 218 1.6E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1933 0978cbfc48bd1de3fdabefababc8c190 235 PANTHER PTHR10108 4 233 4.8E-152 T 22-04-2016 VP1933 0978cbfc48bd1de3fdabefababc8c190 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 1.9E-87 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VP1933 0978cbfc48bd1de3fdabefababc8c190 235 Pfam PF13489 Methyltransferase domain 52 201 1.0E-26 T 22-04-2016 VP1933 0978cbfc48bd1de3fdabefababc8c190 235 PANTHER PTHR10108:SF910 4 233 4.8E-152 T 22-04-2016 VP1933 0978cbfc48bd1de3fdabefababc8c190 235 SUPERFAMILY SSF53335 15 232 1.16E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1933 0978cbfc48bd1de3fdabefababc8c190 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.595 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 Pfam PF00437 Type II/IV secretion system protein 188 455 8.0E-85 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 PANTHER PTHR30258:SF1 2 561 2.2E-248 T 22-04-2016 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 SUPERFAMILY SSF160246 2 140 2.2E-32 T 22-04-2016 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 143 8.0E-17 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 Gene3D G3DSA:3.40.50.300 294 559 8.4E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2524 5eccafe4e40e6d36c63748b8560679a1 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 1.8E-238 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 Gene3D G3DSA:3.30.450.90 170 288 1.2E-49 T 22-04-2016 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 PANTHER PTHR30258 2 561 2.2E-248 T 22-04-2016 VP2524 5eccafe4e40e6d36c63748b8560679a1 561 SUPERFAMILY SSF52540 173 558 8.38E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 5.0E-39 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 PANTHER PTHR13779:SF25 1 333 9.7E-189 T 22-04-2016 VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:1.10.8.60 188 260 1.3E-33 T 22-04-2016 VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:1.10.10.10 262 333 2.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SMART SM00382 56 183 4.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 PANTHER PTHR13779 1 333 9.7E-189 T 22-04-2016 VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SUPERFAMILY SSF52540 25 256 7.04E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.4E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 9.1E-117 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.6E-147 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SUPERFAMILY SSF46785 262 332 1.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.514 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VP1052 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:3.40.50.300 25 182 1.7E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0184 b0d310375d97d952c03f985618f366c8 224 PANTHER PTHR30471 1 224 2.9E-143 T 22-04-2016 VP0184 b0d310375d97d952c03f985618f366c8 224 Pfam PF04002 RadC-like JAB domain 103 222 5.1E-45 T 22-04-2016 IPR025657 RadC-like JAB domain VP0184 b0d310375d97d952c03f985618f366c8 224 Gene3D G3DSA:3.40.140.10 101 224 4.7E-51 T 22-04-2016 VP0184 b0d310375d97d952c03f985618f366c8 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VP0184 b0d310375d97d952c03f985618f366c8 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.2E-77 T 22-04-2016 IPR001405 RadC protein VP0184 b0d310375d97d952c03f985618f366c8 224 SUPERFAMILY SSF102712 134 190 8.24E-5 T 22-04-2016 VP0184 b0d310375d97d952c03f985618f366c8 224 SUPERFAMILY SSF47781 17 91 2.51E-11 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VP0184 b0d310375d97d952c03f985618f366c8 224 PANTHER PTHR30471:SF5 1 224 2.9E-143 T 22-04-2016 VP0596 0001af578537a285348cee7fd91ec29c 404 PIRSF PIRSF005572 2 384 3.1E-138 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VP0596 0001af578537a285348cee7fd91ec29c 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.686 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VP0596 0001af578537a285348cee7fd91ec29c 404 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-89 T 22-04-2016 IPR000192 Aminotransferase class V domain VP0596 0001af578537a285348cee7fd91ec29c 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VP0596 0001af578537a285348cee7fd91ec29c 404 PANTHER PTHR11601:SF45 4 404 7.7E-238 T 22-04-2016 VP0596 0001af578537a285348cee7fd91ec29c 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.6E-230 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VP0596 0001af578537a285348cee7fd91ec29c 404 SUPERFAMILY SSF53383 5 391 3.86E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0596 0001af578537a285348cee7fd91ec29c 404 PANTHER PTHR11601 4 404 7.7E-238 T 22-04-2016 VP0596 0001af578537a285348cee7fd91ec29c 404 Gene3D G3DSA:3.40.640.10 17 254 5.5E-100 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0596 0001af578537a285348cee7fd91ec29c 404 Gene3D G3DSA:3.90.1150.10 255 374 1.7E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 Pfam PF07729 FCD domain 92 217 2.2E-26 T 22-04-2016 IPR011711 GntR, C-terminal VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 SUPERFAMILY SSF46785 16 111 3.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 SMART SM00345 24 82 1.1E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 SUPERFAMILY SSF48008 89 224 1.8E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 5.0E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 PANTHER PTHR11751 20 108 3.9E-53 T 22-04-2016 VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 7.6E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 7.6E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 PANTHER PTHR11751:SF426 20 108 3.9E-53 T 22-04-2016 VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 Gene3D G3DSA:1.10.10.10 12 83 2.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 Gene3D G3DSA:1.20.120.530 86 227 7.4E-31 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP1649 eb4dc4056fc54c3408252e23e3f9c719 237 SMART SM00895 92 219 7.0E-24 T 22-04-2016 IPR011711 GntR, C-terminal VP0380 ceed3e41ae8d80edb8e6e8a38332e98a 455 Gene3D G3DSA:1.10.443.10 230 403 8.8E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0380 ceed3e41ae8d80edb8e6e8a38332e98a 455 PANTHER PTHR30629 1 424 4.9E-61 T 22-04-2016 VP0380 ceed3e41ae8d80edb8e6e8a38332e98a 455 SUPERFAMILY SSF56349 113 406 1.51E-45 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP0380 ceed3e41ae8d80edb8e6e8a38332e98a 455 Gene3D G3DSA:1.10.150.130 113 220 1.7E-8 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VP0380 ceed3e41ae8d80edb8e6e8a38332e98a 455 Pfam PF13356 Domain of unknown function (DUF4102) 2 95 8.1E-9 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 VP0380 ceed3e41ae8d80edb8e6e8a38332e98a 455 Pfam PF00589 Phage integrase family 231 382 1.5E-14 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0380 ceed3e41ae8d80edb8e6e8a38332e98a 455 PANTHER PTHR30629:SF2 1 424 4.9E-61 T 22-04-2016 VPA1740 771ff1d0ff249ca2235d97956667ba6c 236 PANTHER PTHR11785 1 234 1.6E-52 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPA1740 771ff1d0ff249ca2235d97956667ba6c 236 Pfam PF13520 Amino acid permease 3 236 2.8E-31 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPA1740 771ff1d0ff249ca2235d97956667ba6c 236 PANTHER PTHR11785:SF216 1 234 1.6E-52 T 22-04-2016 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.4E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 8 74 5.2E-33 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 PANTHER PTHR13479 2 74 2.1E-35 T 22-04-2016 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2738 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP1318 2058fd3bb92e521faeedddc015204ab3 496 PANTHER PTHR30250 1 496 3.8E-41 T 22-04-2016 VP1318 2058fd3bb92e521faeedddc015204ab3 496 PANTHER PTHR30250:SF7 1 496 3.8E-41 T 22-04-2016 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 43 59 0.0025 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 0.0036 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 29 40 27.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 26 1.7 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 0.41 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.028 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 Gene3D G3DSA:2.150.10.10 9 199 1.6E-31 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VP1952 684006686aef5ff2805f7e7fdeca51a0 236 PRINTS PR00313 NodO calcium binding signature 106 114 2.4E-12 T 22-04-2016 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 PRINTS PR00313 NodO calcium binding signature 88 96 2.4E-12 T 22-04-2016 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.4E-12 T 22-04-2016 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 PRINTS PR00313 NodO calcium binding signature 76 87 2.4E-12 T 22-04-2016 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 PANTHER PTHR38340 7 190 4.4E-12 T 22-04-2016 VP1952 684006686aef5ff2805f7e7fdeca51a0 236 SUPERFAMILY SSF51120 9 203 4.45E-28 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VP1952 684006686aef5ff2805f7e7fdeca51a0 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 48 66 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VP1952 684006686aef5ff2805f7e7fdeca51a0 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VP1952 684006686aef5ff2805f7e7fdeca51a0 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VP1952 684006686aef5ff2805f7e7fdeca51a0 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VP1745 8f76fcc991a5c562ed0140f76d036269 319 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 3.1E-86 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP1745 8f76fcc991a5c562ed0140f76d036269 319 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 46.658 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VP1745 8f76fcc991a5c562ed0140f76d036269 319 PIRSF PIRSF026649 4 307 3.1E-89 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP1745 8f76fcc991a5c562ed0140f76d036269 319 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 307 9.2E-141 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VP1745 8f76fcc991a5c562ed0140f76d036269 319 PANTHER PTHR30606:SF5 4 310 1.0E-136 T 22-04-2016 VP1745 8f76fcc991a5c562ed0140f76d036269 319 PANTHER PTHR30606 4 310 1.0E-136 T 22-04-2016 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 PANTHER PTHR11655 1 176 1.3E-88 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 Pfam PF00347 Ribosomal protein L6 91 164 1.0E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 Pfam PF00347 Ribosomal protein L6 11 82 2.7E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.3E-74 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 Gene3D G3DSA:3.90.930.12 2 82 4.8E-30 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 SUPERFAMILY SSF56053 83 177 9.68E-36 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.665 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 PIRSF PIRSF002162 1 177 1.2E-45 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 Gene3D G3DSA:3.90.930.12 83 177 1.7E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 SUPERFAMILY SSF56053 1 82 5.23E-25 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP0272 51526b9d4525cb8bb0791f4296c2a808 177 PANTHER PTHR11655:SF14 1 176 1.3E-88 T 22-04-2016 VP3059 54e9d68dc2194d6b05c0ca53be3280b5 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 1.0E-4 T 22-04-2016 VP3059 54e9d68dc2194d6b05c0ca53be3280b5 94 Gene3D G3DSA:3.30.70.260 1 76 1.4E-12 T 22-04-2016 VP3059 54e9d68dc2194d6b05c0ca53be3280b5 94 Pfam PF13710 ACT domain 12 73 2.9E-21 T 22-04-2016 VP3059 54e9d68dc2194d6b05c0ca53be3280b5 94 SUPERFAMILY SSF55021 3 76 1.21E-11 T 22-04-2016 VP0257 f63f291b9325042f371bc646bf08f846 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.124 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0257 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:2.40.30.10 3 32 1.0E-10 T 22-04-2016 VP0257 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:2.40.30.10 158 207 1.0E-10 T 22-04-2016 VP0257 f63f291b9325042f371bc646bf08f846 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 6.7E-95 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0257 f63f291b9325042f371bc646bf08f846 209 PANTHER PTHR11229 1 208 1.8E-125 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0257 f63f291b9325042f371bc646bf08f846 209 SUPERFAMILY SSF50447 1 208 3.62E-84 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP0257 f63f291b9325042f371bc646bf08f846 209 Pfam PF00297 Ribosomal protein L3 93 182 1.5E-16 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0257 f63f291b9325042f371bc646bf08f846 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site VP0257 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:4.10.960.10 77 157 1.0E-38 T 22-04-2016 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 SUPERFAMILY SSF46785 4 117 1.09E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0581 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:3.40.190.10 200 275 1.5E-18 T 22-04-2016 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 SUPERFAMILY SSF53850 95 300 1.01E-34 T 22-04-2016 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 PANTHER PTHR30346 3 301 3.8E-202 T 22-04-2016 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 7.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 PANTHER PTHR30346:SF10 3 301 3.8E-202 T 22-04-2016 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 Pfam PF03466 LysR substrate binding domain 96 299 5.7E-37 T 22-04-2016 IPR005119 LysR, substrate-binding VP0581 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:3.40.190.10 96 199 4.1E-24 T 22-04-2016 VP0581 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:1.10.10.10 6 84 1.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2025 7d12cd3faadebf839aa10dbe047aa6ee 666 Gene3D G3DSA:3.90.76.10 143 219 7.6E-21 T 22-04-2016 VP2025 7d12cd3faadebf839aa10dbe047aa6ee 666 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 147 544 1.8E-60 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VP2025 7d12cd3faadebf839aa10dbe047aa6ee 666 PANTHER PTHR30290 102 640 1.8E-64 T 22-04-2016 VP2025 7d12cd3faadebf839aa10dbe047aa6ee 666 PANTHER PTHR30290 22 68 1.8E-64 T 22-04-2016 VP2025 7d12cd3faadebf839aa10dbe047aa6ee 666 SUPERFAMILY SSF53850 99 620 1.72E-93 T 22-04-2016 VP2025 7d12cd3faadebf839aa10dbe047aa6ee 666 Gene3D G3DSA:3.40.190.10 220 391 2.7E-16 T 22-04-2016 VP2025 7d12cd3faadebf839aa10dbe047aa6ee 666 Gene3D G3DSA:3.10.105.10 392 598 4.8E-42 T 22-04-2016 VP2025 7d12cd3faadebf839aa10dbe047aa6ee 666 PIRSF PIRSF002741 53 627 2.7E-66 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VP1954 df234be8761e36b0271ec6e4a505d100 285 Pfam PF02811 PHP domain 4 181 1.7E-10 T 22-04-2016 IPR004013 PHP domain GO:0003824 VP1954 df234be8761e36b0271ec6e4a505d100 285 Gene3D G3DSA:3.20.20.140 1 88 6.5E-48 T 22-04-2016 VP1954 df234be8761e36b0271ec6e4a505d100 285 Gene3D G3DSA:3.20.20.140 157 261 6.5E-48 T 22-04-2016 VP1954 df234be8761e36b0271ec6e4a505d100 285 SUPERFAMILY SSF89550 165 275 8.63E-55 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VP1954 df234be8761e36b0271ec6e4a505d100 285 SUPERFAMILY SSF89550 1 83 8.63E-55 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VP1954 df234be8761e36b0271ec6e4a505d100 285 PANTHER PTHR30007:SF4 1 275 6.8E-102 T 22-04-2016 VP1954 df234be8761e36b0271ec6e4a505d100 285 SMART SM00481 3 70 2.5E-18 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VP1954 df234be8761e36b0271ec6e4a505d100 285 PANTHER PTHR30007 1 275 6.8E-102 T 22-04-2016 VP1241 234261d568ae564bcb737702e22ba9e3 195 SUPERFAMILY SSF159894 3 103 1.94E-26 T 22-04-2016 VP1241 234261d568ae564bcb737702e22ba9e3 195 PIRSF PIRSF028788 6 195 2.4E-35 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VP1241 234261d568ae564bcb737702e22ba9e3 195 Pfam PF04993 TfoX N-terminal domain 11 101 6.4E-23 T 22-04-2016 IPR007076 TfoX, N-terminal VP1241 234261d568ae564bcb737702e22ba9e3 195 PANTHER PTHR36121:SF1 1 195 1.4E-43 T 22-04-2016 VP1241 234261d568ae564bcb737702e22ba9e3 195 Gene3D G3DSA:1.10.150.20 114 194 4.9E-27 T 22-04-2016 VP1241 234261d568ae564bcb737702e22ba9e3 195 Gene3D G3DSA:3.30.1460.30 2 102 1.6E-26 T 22-04-2016 IPR007076 TfoX, N-terminal VP1241 234261d568ae564bcb737702e22ba9e3 195 Pfam PF04994 TfoX C-terminal domain 114 192 7.6E-28 T 22-04-2016 IPR007077 TfoX, C-terminal VP1241 234261d568ae564bcb737702e22ba9e3 195 PANTHER PTHR36121 1 195 1.4E-43 T 22-04-2016 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 PANTHER PTHR10996 1 370 1.3E-242 T 22-04-2016 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF55021 338 409 6.49E-18 T 22-04-2016 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF51735 108 295 7.81E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 9.4E-53 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.40.50.720 8 119 1.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF52283 7 136 1.4E-49 T 22-04-2016 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.30.70.260 324 409 1.2E-30 T 22-04-2016 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 PANTHER PTHR10996:SF18 1 370 1.3E-242 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.2E-38 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VP2593 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.40.50.720 120 297 1.5E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 SMART SM00535 20 148 6.3E-56 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 Gene3D G3DSA:1.10.1520.10 5 144 1.4E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 4.3E-75 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 SUPERFAMILY SSF54768 108 222 5.19E-29 T 22-04-2016 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 Pfam PF14622 Ribonuclease-III-like 20 140 3.3E-33 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 PANTHER PTHR11207 1 222 2.8E-101 T 22-04-2016 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.029 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 Gene3D G3DSA:3.30.160.20 152 223 5.7E-28 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.1E-16 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 SUPERFAMILY SSF69065 5 158 6.98E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VP2572 c3b7a982cf4ba04917f422397c2b71a5 225 SMART SM00358 155 223 1.4E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VP0652 9bfbac61d9f318683cba008c8c180dca 424 PANTHER PTHR11958 1 418 7.5E-127 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 1.5E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 Gene3D G3DSA:1.10.3860.10 3 408 2.9E-109 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 SUPERFAMILY SSF118215 5 406 2.62E-105 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PANTHER PTHR11958:SF44 1 418 7.5E-127 T 22-04-2016 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP0652 9bfbac61d9f318683cba008c8c180dca 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1262 9d8190560625aec610f5a2b0c6941e06 557 Pfam PF09423 PhoD-like phosphatase 136 528 5.8E-117 T 22-04-2016 IPR018946 Alkaline phosphatase D-related VP1262 9d8190560625aec610f5a2b0c6941e06 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 38 125 4.4E-28 T 22-04-2016 IPR032093 Phospholipase D, N-terminal VP1262 9d8190560625aec610f5a2b0c6941e06 557 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 0.0012 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VP1262 9d8190560625aec610f5a2b0c6941e06 557 PANTHER PTHR22953:SF28 338 554 1.2E-95 T 22-04-2016 VP1262 9d8190560625aec610f5a2b0c6941e06 557 PANTHER PTHR22953:SF28 201 308 1.2E-95 T 22-04-2016 VP1262 9d8190560625aec610f5a2b0c6941e06 557 PANTHER PTHR22953:SF28 28 177 1.2E-95 T 22-04-2016 VP1262 9d8190560625aec610f5a2b0c6941e06 557 SUPERFAMILY SSF56300 136 308 1.67E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1262 9d8190560625aec610f5a2b0c6941e06 557 SUPERFAMILY SSF56300 340 368 1.67E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1262 9d8190560625aec610f5a2b0c6941e06 557 SUPERFAMILY SSF56300 416 532 1.67E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1262 9d8190560625aec610f5a2b0c6941e06 557 PANTHER PTHR22953 338 554 1.2E-95 T 22-04-2016 VP1262 9d8190560625aec610f5a2b0c6941e06 557 PANTHER PTHR22953 201 308 1.2E-95 T 22-04-2016 VP1262 9d8190560625aec610f5a2b0c6941e06 557 PANTHER PTHR22953 28 177 1.2E-95 T 22-04-2016 VP1262 9d8190560625aec610f5a2b0c6941e06 557 Gene3D G3DSA:3.60.21.10 147 358 7.4E-11 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0006 9bdc294ff2a48eff440602f646deb821 245 PANTHER PTHR24220 3 242 7.5E-129 T 22-04-2016 VP0006 9bdc294ff2a48eff440602f646deb821 245 SUPERFAMILY SSF52540 1 238 2.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0006 9bdc294ff2a48eff440602f646deb821 245 Pfam PF00005 ABC transporter 17 168 9.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0006 9bdc294ff2a48eff440602f646deb821 245 Gene3D G3DSA:3.40.50.300 1 240 1.8E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0006 9bdc294ff2a48eff440602f646deb821 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0006 9bdc294ff2a48eff440602f646deb821 245 PANTHER PTHR24220:SF327 3 242 7.5E-129 T 22-04-2016 VP0006 9bdc294ff2a48eff440602f646deb821 245 PIRSF PIRSF039085 1 244 8.7E-106 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VP0006 9bdc294ff2a48eff440602f646deb821 245 SMART SM00382 26 216 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0330 dec8d8780046449d053d2daa4f49e6f3 390 PANTHER PTHR11702:SF3 1 378 5.5E-182 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 SUPERFAMILY SSF82051 2 157 3.4E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 6.5E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 Gene3D G3DSA:3.40.50.300 160 342 2.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0330 dec8d8780046449d053d2daa4f49e6f3 390 Gene3D G3DSA:2.70.210.12 2 156 1.5E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.4E-143 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 PIRSF PIRSF002401 1 375 4.7E-137 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.059 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 PANTHER PTHR11702 1 378 5.5E-182 T 22-04-2016 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 Pfam PF01018 GTP1/OBG 3 156 1.8E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 VP0330 dec8d8780046449d053d2daa4f49e6f3 390 SUPERFAMILY SSF52540 151 340 1.13E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1653 d4d283de2557f4259fea848f1dfc339c 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 6.7E-141 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane VP1653 d4d283de2557f4259fea848f1dfc339c 508 PANTHER PTHR35342 1 498 5.8E-290 T 22-04-2016 VP1653 d4d283de2557f4259fea848f1dfc339c 508 PANTHER PTHR35342:SF2 1 498 5.8E-290 T 22-04-2016 VP2399 35879202904005bdf4c8988013761a59 350 Gene3D G3DSA:3.30.428.10 178 349 1.5E-76 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP2399 35879202904005bdf4c8988013761a59 350 PANTHER PTHR11943:SF2 1 349 7.5E-214 T 22-04-2016 VP2399 35879202904005bdf4c8988013761a59 350 Gene3D G3DSA:3.30.428.10 46 177 2.6E-56 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP2399 35879202904005bdf4c8988013761a59 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.3E-66 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2399 35879202904005bdf4c8988013761a59 350 PANTHER PTHR11943 1 349 7.5E-214 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2399 35879202904005bdf4c8988013761a59 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2399 35879202904005bdf4c8988013761a59 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 1.2E-65 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2399 35879202904005bdf4c8988013761a59 350 SUPERFAMILY SSF54197 6 179 1.34E-72 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP2399 35879202904005bdf4c8988013761a59 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 6.8E-186 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2399 35879202904005bdf4c8988013761a59 350 PIRSF PIRSF000808 2 345 2.2E-125 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VP2399 35879202904005bdf4c8988013761a59 350 SUPERFAMILY SSF54197 181 348 3.91E-56 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP1264 ffaffea2858b3d7c1ae4c27b2564856f 130 SUPERFAMILY SSF52540 22 97 3.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1264 ffaffea2858b3d7c1ae4c27b2564856f 130 Gene3D G3DSA:3.40.50.300 19 121 8.3E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1264 ffaffea2858b3d7c1ae4c27b2564856f 130 Pfam PF03846 Cell division inhibitor SulA 17 96 4.5E-7 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 VP0743 471e198c9cd90aef1b3d4136b3025412 362 Pfam PF00472 RF-1 domain 218 323 1.3E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VP0743 471e198c9cd90aef1b3d4136b3025412 362 Gene3D G3DSA:1.20.58.410 7 94 8.5E-26 T 22-04-2016 VP0743 471e198c9cd90aef1b3d4136b3025412 362 Gene3D G3DSA:3.30.160.20 217 291 1.2E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VP0743 471e198c9cd90aef1b3d4136b3025412 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.775 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VP0743 471e198c9cd90aef1b3d4136b3025412 362 SMART SM00937 67 180 6.8E-68 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VP0743 471e198c9cd90aef1b3d4136b3025412 362 Pfam PF03462 PCRF domain 13 205 1.4E-77 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VP0743 471e198c9cd90aef1b3d4136b3025412 362 PANTHER PTHR11075:SF9 1 358 9.6E-181 T 22-04-2016 VP0743 471e198c9cd90aef1b3d4136b3025412 362 SUPERFAMILY SSF75620 12 355 9.68E-138 T 22-04-2016 VP0743 471e198c9cd90aef1b3d4136b3025412 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VP0743 471e198c9cd90aef1b3d4136b3025412 362 PANTHER PTHR11075 1 358 9.6E-181 T 22-04-2016 VP0743 471e198c9cd90aef1b3d4136b3025412 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 3.7E-171 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VP2063 00b9d7ecc17cdf39e9d32781943013a8 519 PANTHER PTHR11814 4 503 7.3E-175 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VP2063 00b9d7ecc17cdf39e9d32781943013a8 519 SUPERFAMILY SSF52091 416 498 2.35E-11 T 22-04-2016 IPR002645 STAS domain VP2063 00b9d7ecc17cdf39e9d32781943013a8 519 PANTHER PTHR11814:SF71 4 503 7.3E-175 T 22-04-2016 VP2063 00b9d7ecc17cdf39e9d32781943013a8 519 Gene3D G3DSA:3.30.750.24 417 506 3.3E-9 T 22-04-2016 IPR002645 STAS domain VP2063 00b9d7ecc17cdf39e9d32781943013a8 519 Pfam PF00916 Sulfate permease family 13 374 1.3E-57 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VP2063 00b9d7ecc17cdf39e9d32781943013a8 519 Pfam PF01740 STAS domain 417 503 2.5E-6 T 22-04-2016 IPR002645 STAS domain VP2495 65310129544b095333ed460814792d41 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VP2495 65310129544b095333ed460814792d41 865 SUPERFAMILY SSF52016 162 372 2.2E-72 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VP2495 65310129544b095333ed460814792d41 865 Gene3D G3DSA:3.30.499.10 402 519 9.0E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2495 65310129544b095333ed460814792d41 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 7.9E-67 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VP2495 65310129544b095333ed460814792d41 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.9E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2495 65310129544b095333ed460814792d41 865 SUPERFAMILY SSF53732 379 861 8.89E-148 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2495 65310129544b095333ed460814792d41 865 Gene3D G3DSA:3.30.499.10 684 859 1.8E-54 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2495 65310129544b095333ed460814792d41 865 Gene3D G3DSA:3.20.19.10 162 361 3.6E-96 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VP2495 65310129544b095333ed460814792d41 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.4E-100 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VP2495 65310129544b095333ed460814792d41 865 Gene3D G3DSA:3.40.1060.10 520 682 8.0E-85 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2495 65310129544b095333ed460814792d41 865 SUPERFAMILY SSF74778 2 160 2.22E-68 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VP2495 65310129544b095333ed460814792d41 865 PANTHER PTHR11670 305 863 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2495 65310129544b095333ed460814792d41 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2495 65310129544b095333ed460814792d41 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VP2495 65310129544b095333ed460814792d41 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2495 65310129544b095333ed460814792d41 865 PANTHER PTHR11670:SF39 305 863 0.0 T 22-04-2016 VP0899 371ed3e598e17bf4bc858fe7f2803bc0 361 Gene3D G3DSA:3.40.50.150 107 346 7.6E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0899 371ed3e598e17bf4bc858fe7f2803bc0 361 SUPERFAMILY SSF53335 107 347 7.07E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0899 371ed3e598e17bf4bc858fe7f2803bc0 361 PIRSF PIRSF005739 8 353 2.0E-5 T 22-04-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 VP0899 371ed3e598e17bf4bc858fe7f2803bc0 361 Pfam PF00891 O-methyltransferase 181 344 5.1E-12 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 VP0899 371ed3e598e17bf4bc858fe7f2803bc0 361 SUPERFAMILY SSF46785 25 105 8.85E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0899 371ed3e598e17bf4bc858fe7f2803bc0 361 PANTHER PTHR11746 1 281 1.1E-17 T 22-04-2016 VP0131 7ad16bedf9ae74d4ab0faf37c4388474 128 SUPERFAMILY SSF55174 8 105 4.84E-31 T 22-04-2016 VP0131 7ad16bedf9ae74d4ab0faf37c4388474 128 PANTHER PTHR11079 1 75 2.7E-29 T 22-04-2016 VP0131 7ad16bedf9ae74d4ab0faf37c4388474 128 Gene3D G3DSA:3.10.290.10 7 103 1.7E-38 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0131 7ad16bedf9ae74d4ab0faf37c4388474 128 PIRSF PIRSF016821 5 128 2.0E-42 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VP0131 7ad16bedf9ae74d4ab0faf37c4388474 128 PANTHER PTHR11079:SF70 1 75 2.7E-29 T 22-04-2016 VP0131 7ad16bedf9ae74d4ab0faf37c4388474 128 SMART SM00363 8 71 1.4E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0131 7ad16bedf9ae74d4ab0faf37c4388474 128 Pfam PF01479 S4 domain 8 54 3.9E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP0452 27127fcdd94d49d4920e644610f7118e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.128 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0452 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF81799 113 216 3.53E-31 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0452 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:3.40.50.150 7 110 3.2E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0452 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:3.40.50.150 220 316 3.2E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0452 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF53335 7 113 6.94E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0452 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF53335 217 316 6.94E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0452 27127fcdd94d49d4920e644610f7118e 316 PANTHER PTHR11265 1 316 8.7E-145 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0452 27127fcdd94d49d4920e644610f7118e 316 PIRSF PIRSF004486 1 316 1.4E-101 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0452 27127fcdd94d49d4920e644610f7118e 316 Pfam PF01795 MraW methylase family 5 315 4.5E-110 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0452 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:1.10.150.170 112 219 1.1E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0452 27127fcdd94d49d4920e644610f7118e 316 PANTHER PTHR11265:SF0 1 316 8.7E-145 T 22-04-2016 VP0452 27127fcdd94d49d4920e644610f7118e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 4.3E-119 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0760 faea831d5754b9be3d973d1250af1753 373 Pfam PF13609 Gram-negative porin 10 342 2.9E-35 T 22-04-2016 VP0760 faea831d5754b9be3d973d1250af1753 373 Gene3D G3DSA:2.40.160.10 43 373 5.0E-41 T 22-04-2016 IPR023614 Porin domain VP0760 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 177 188 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VP0760 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 73 84 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VP0760 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 365 373 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VP0760 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 117 127 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VP0760 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 278 290 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VP0760 faea831d5754b9be3d973d1250af1753 373 SUPERFAMILY SSF56935 44 373 6.11E-41 T 22-04-2016 VP2102 f2ec17442c762b2f51622e73c67ca2b6 192 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.24 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VP2102 f2ec17442c762b2f51622e73c67ca2b6 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.6E-61 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VP2102 f2ec17442c762b2f51622e73c67ca2b6 192 PANTHER PTHR30335 2 192 1.6E-131 T 22-04-2016 VP2102 f2ec17442c762b2f51622e73c67ca2b6 192 PIRSF PIRSF006102 1 192 4.5E-64 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VP2102 f2ec17442c762b2f51622e73c67ca2b6 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VP2102 f2ec17442c762b2f51622e73c67ca2b6 192 PANTHER PTHR30335:SF0 2 192 1.6E-131 T 22-04-2016 VP1504 bf513090673affc2414c3f7f24b7b823 530 Pfam PF12848 ABC transporter 224 309 9.0E-22 T 22-04-2016 IPR032781 ABC-transporter extension domain VP1504 bf513090673affc2414c3f7f24b7b823 530 PANTHER PTHR19211 1 525 0.0 T 22-04-2016 VP1504 bf513090673affc2414c3f7f24b7b823 530 SUPERFAMILY SSF52540 333 516 1.62E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1504 bf513090673affc2414c3f7f24b7b823 530 PANTHER PTHR19211:SF38 1 525 0.0 T 22-04-2016 VP1504 bf513090673affc2414c3f7f24b7b823 530 Gene3D G3DSA:3.40.50.300 319 527 2.9E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1504 bf513090673affc2414c3f7f24b7b823 530 SMART SM00382 26 238 3.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1504 bf513090673affc2414c3f7f24b7b823 530 SMART SM00382 343 511 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1504 bf513090673affc2414c3f7f24b7b823 530 Pfam PF00005 ABC transporter 337 466 5.9E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1504 bf513090673affc2414c3f7f24b7b823 530 Pfam PF00005 ABC transporter 18 184 1.0E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1504 bf513090673affc2414c3f7f24b7b823 530 SUPERFAMILY SSF52540 7 237 8.08E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1504 bf513090673affc2414c3f7f24b7b823 530 Gene3D G3DSA:3.40.50.300 132 281 4.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1504 bf513090673affc2414c3f7f24b7b823 530 Gene3D G3DSA:3.40.50.300 4 100 4.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0551 e6da70235a3409749058182b52d7e2bf 555 PANTHER PTHR19211:SF7 1 555 0.0 T 22-04-2016 VP0551 e6da70235a3409749058182b52d7e2bf 555 SUPERFAMILY SSF52540 9 242 3.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0551 e6da70235a3409749058182b52d7e2bf 555 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 VP0551 e6da70235a3409749058182b52d7e2bf 555 Gene3D G3DSA:3.40.50.300 322 532 4.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0551 e6da70235a3409749058182b52d7e2bf 555 Gene3D G3DSA:3.40.50.300 8 279 3.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0551 e6da70235a3409749058182b52d7e2bf 555 Pfam PF00005 ABC transporter 22 191 2.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0551 e6da70235a3409749058182b52d7e2bf 555 Pfam PF00005 ABC transporter 340 473 1.2E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0551 e6da70235a3409749058182b52d7e2bf 555 Pfam PF12848 ABC transporter 230 306 2.3E-13 T 22-04-2016 IPR032781 ABC-transporter extension domain VP0551 e6da70235a3409749058182b52d7e2bf 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0551 e6da70235a3409749058182b52d7e2bf 555 SUPERFAMILY SSF52540 302 525 1.58E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0551 e6da70235a3409749058182b52d7e2bf 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 9.0E-293 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD VP0551 e6da70235a3409749058182b52d7e2bf 555 SMART SM00382 348 518 1.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0551 e6da70235a3409749058182b52d7e2bf 555 SMART SM00382 31 236 5.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0516 a9ce5a98c8a28637d292cd40920fc535 352 Gene3D G3DSA:3.20.20.100 9 350 4.3E-106 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VP0516 a9ce5a98c8a28637d292cd40920fc535 352 SUPERFAMILY SSF51430 9 351 4.71E-107 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VP0516 a9ce5a98c8a28637d292cd40920fc535 352 PANTHER PTHR11732 9 145 3.4E-200 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VP0516 a9ce5a98c8a28637d292cd40920fc535 352 PANTHER PTHR11732 163 352 3.4E-200 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VP0516 a9ce5a98c8a28637d292cd40920fc535 352 Pfam PF00248 Aldo/keto reductase family 23 343 7.6E-75 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VP0516 a9ce5a98c8a28637d292cd40920fc535 352 PANTHER PTHR11732:SF112 9 145 3.4E-200 T 22-04-2016 VP0516 a9ce5a98c8a28637d292cd40920fc535 352 PANTHER PTHR11732:SF112 163 352 3.4E-200 T 22-04-2016 VP2554 05fd66ca045f300a387e3c8686a56332 307 PANTHER PTHR21666:SF222 189 307 6.1E-55 T 22-04-2016 VP2554 05fd66ca045f300a387e3c8686a56332 307 SUPERFAMILY SSF51261 48 306 2.82E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif VP2554 05fd66ca045f300a387e3c8686a56332 307 Gene3D G3DSA:2.70.70.10 170 306 5.1E-41 T 22-04-2016 VP2554 05fd66ca045f300a387e3c8686a56332 307 Pfam PF01476 LysM domain 49 91 2.0E-10 T 22-04-2016 IPR018392 LysM domain VP2554 05fd66ca045f300a387e3c8686a56332 307 Pfam PF01551 Peptidase family M23 208 302 5.6E-31 T 22-04-2016 IPR016047 Peptidase M23 VP2554 05fd66ca045f300a387e3c8686a56332 307 SMART SM00257 48 92 1.5E-11 T 22-04-2016 IPR018392 LysM domain VP2554 05fd66ca045f300a387e3c8686a56332 307 Gene3D G3DSA:3.10.350.10 47 92 1.2E-13 T 22-04-2016 IPR018392 LysM domain VP2554 05fd66ca045f300a387e3c8686a56332 307 PANTHER PTHR21666 189 307 6.1E-55 T 22-04-2016 VP1946 eb8d232009745e01766cdb35740f33f6 787 SMART SM00486 153 558 7.8E-68 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1946 eb8d232009745e01766cdb35740f33f6 787 Gene3D G3DSA:3.30.420.10 153 366 2.7E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1946 eb8d232009745e01766cdb35740f33f6 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1946 eb8d232009745e01766cdb35740f33f6 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1946 eb8d232009745e01766cdb35740f33f6 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1946 eb8d232009745e01766cdb35740f33f6 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 75 296 1.7E-19 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1946 eb8d232009745e01766cdb35740f33f6 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1946 eb8d232009745e01766cdb35740f33f6 787 PANTHER PTHR10322 105 787 2.1E-178 T 22-04-2016 VP1946 eb8d232009745e01766cdb35740f33f6 787 SUPERFAMILY SSF53098 4 389 2.22E-85 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1946 eb8d232009745e01766cdb35740f33f6 787 Pfam PF00136 DNA polymerase family B 377 742 2.7E-42 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1946 eb8d232009745e01766cdb35740f33f6 787 SUPERFAMILY SSF56672 385 780 1.61E-118 T 22-04-2016 VP1946 eb8d232009745e01766cdb35740f33f6 787 Gene3D G3DSA:3.90.1600.10 401 431 5.1E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1946 eb8d232009745e01766cdb35740f33f6 787 Gene3D G3DSA:3.90.1600.10 515 639 5.1E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 Pfam PF03466 LysR substrate binding domain 116 316 4.3E-23 T 22-04-2016 IPR005119 LysR, substrate-binding VP0027 f2c12fe9819625b9864c796f4fb25a54 330 PANTHER PTHR30118:SF8 17 325 5.0E-77 T 22-04-2016 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 SUPERFAMILY SSF46785 24 105 2.42E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0027 f2c12fe9819625b9864c796f4fb25a54 330 Gene3D G3DSA:3.40.190.10 192 286 6.1E-21 T 22-04-2016 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 PANTHER PTHR30118 17 325 5.0E-77 T 22-04-2016 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 86 2.8E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 Gene3D G3DSA:1.10.10.10 22 107 1.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0027 f2c12fe9819625b9864c796f4fb25a54 330 SUPERFAMILY SSF53850 109 315 1.81E-41 T 22-04-2016 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 64 75 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 64 1.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 Gene3D G3DSA:3.40.190.10 291 319 2.7E-25 T 22-04-2016 VP0027 f2c12fe9819625b9864c796f4fb25a54 330 Gene3D G3DSA:3.40.190.10 109 191 2.7E-25 T 22-04-2016 VP1475 2aa22a90727cda83c2942fc945fa8eb1 300 Pfam PF00691 OmpA family 167 261 6.9E-20 T 22-04-2016 IPR006665 OmpA-like domain VP1475 2aa22a90727cda83c2942fc945fa8eb1 300 PANTHER PTHR30128 95 277 2.3E-24 T 22-04-2016 VP1475 2aa22a90727cda83c2942fc945fa8eb1 300 SUPERFAMILY SSF103088 156 267 4.71E-29 T 22-04-2016 IPR006665 OmpA-like domain VP1475 2aa22a90727cda83c2942fc945fa8eb1 300 PRINTS PR01021 OMPA domain signature 212 228 5.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1475 2aa22a90727cda83c2942fc945fa8eb1 300 PRINTS PR01021 OMPA domain signature 167 189 5.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1475 2aa22a90727cda83c2942fc945fa8eb1 300 PRINTS PR01021 OMPA domain signature 197 212 5.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1475 2aa22a90727cda83c2942fc945fa8eb1 300 Gene3D G3DSA:3.30.1330.60 163 269 2.6E-27 T 22-04-2016 IPR006665 OmpA-like domain VP0844 305b259e68a77dd8f95f064831f4ab21 114 PANTHER PTHR38689 2 114 3.3E-56 T 22-04-2016 VP0844 305b259e68a77dd8f95f064831f4ab21 114 PANTHER PTHR38689:SF1 2 114 3.3E-56 T 22-04-2016 VP0844 305b259e68a77dd8f95f064831f4ab21 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 101 2.6E-6 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 VP0844 305b259e68a77dd8f95f064831f4ab21 114 PIRSF PIRSF000169 1 114 9.2E-38 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VP0844 305b259e68a77dd8f95f064831f4ab21 114 SUPERFAMILY SSF81343 4 113 9.16E-26 T 22-04-2016 VP0844 305b259e68a77dd8f95f064831f4ab21 114 Gene3D G3DSA:1.20.1300.10 1 113 1.4E-35 T 22-04-2016 VP0844 305b259e68a77dd8f95f064831f4ab21 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 5.2E-35 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VP0412 67870558515bdfaa143ae67cd5568012 160 SUPERFAMILY SSF55083 1 148 9.94E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP0412 67870558515bdfaa143ae67cd5568012 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 2.0E-28 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP0412 67870558515bdfaa143ae67cd5568012 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 1.9E-24 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP0412 67870558515bdfaa143ae67cd5568012 160 PANTHER PTHR20941 1 158 9.7E-55 T 22-04-2016 VP0412 67870558515bdfaa143ae67cd5568012 160 PANTHER PTHR20941:SF12 1 158 9.7E-55 T 22-04-2016 VP0412 67870558515bdfaa143ae67cd5568012 160 Gene3D G3DSA:3.30.70.560 3 149 5.4E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP1827 763a2960fb938dfad5290fce7a102b97 182 SUPERFAMILY SSF55729 12 177 2.92E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1827 763a2960fb938dfad5290fce7a102b97 182 Gene3D G3DSA:3.40.630.30 13 176 5.7E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1827 763a2960fb938dfad5290fce7a102b97 182 Pfam PF00583 Acetyltransferase (GNAT) family 78 156 6.1E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP0984 90eb6efb7fa4db75801c052684d58e16 251 PANTHER PTHR21485 1 246 2.0E-126 T 22-04-2016 VP0984 90eb6efb7fa4db75801c052684d58e16 251 PANTHER PTHR21485:SF4 1 246 2.0E-126 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VP0984 90eb6efb7fa4db75801c052684d58e16 251 SUPERFAMILY SSF53448 3 246 1.82E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0984 90eb6efb7fa4db75801c052684d58e16 251 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.983 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VP0984 90eb6efb7fa4db75801c052684d58e16 251 Gene3D G3DSA:3.90.550.10 1 249 5.7E-87 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0984 90eb6efb7fa4db75801c052684d58e16 251 Pfam PF02348 Cytidylyltransferase 5 221 4.9E-66 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VP0984 90eb6efb7fa4db75801c052684d58e16 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 8.5E-118 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VP0688 abba093184d331d85d5afdb98ef55f7b 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.2E-18 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VP0688 abba093184d331d85d5afdb98ef55f7b 80 SUPERFAMILY SSF116842 2 72 9.15E-21 T 22-04-2016 VP0688 abba093184d331d85d5afdb98ef55f7b 80 PANTHER PTHR34137 1 80 4.8E-26 T 22-04-2016 VP0688 abba093184d331d85d5afdb98ef55f7b 80 PIRSF PIRSF006488 1 80 7.1E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VP0688 abba093184d331d85d5afdb98ef55f7b 80 Gene3D G3DSA:1.10.287.1040 5 78 6.0E-27 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VP0688 abba093184d331d85d5afdb98ef55f7b 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VP0688 abba093184d331d85d5afdb98ef55f7b 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VP0688 abba093184d331d85d5afdb98ef55f7b 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 7.0E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 SUPERFAMILY SSF47757 3 75 2.48E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VP0774 5205aeb81f32ee592b36e66e7574a29e 275 PANTHER PTHR24422 1 275 1.3E-121 T 22-04-2016 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 PANTHER PTHR24422:SF9 1 275 1.3E-121 T 22-04-2016 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 SUPERFAMILY SSF53335 76 269 2.55E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0774 5205aeb81f32ee592b36e66e7574a29e 275 SMART SM00138 8 272 4.7E-132 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 Gene3D G3DSA:3.40.50.150 75 270 1.1E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0774 5205aeb81f32ee592b36e66e7574a29e 275 Gene3D G3DSA:1.10.155.10 3 74 4.9E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VP0774 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VP0774 5205aeb81f32ee592b36e66e7574a29e 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 9.7E-69 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VP0774 5205aeb81f32ee592b36e66e7574a29e 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 55 7.1E-10 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VP1776 ad57337492f298e1028fdbc539551fec 137 Pfam PF00171 Aldehyde dehydrogenase family 8 130 2.9E-50 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP1776 ad57337492f298e1028fdbc539551fec 137 Gene3D G3DSA:3.40.309.10 8 111 1.6E-39 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP1776 ad57337492f298e1028fdbc539551fec 137 SUPERFAMILY SSF53720 3 135 2.09E-46 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP1776 ad57337492f298e1028fdbc539551fec 137 PANTHER PTHR11699 10 135 8.6E-73 T 22-04-2016 VP1776 ad57337492f298e1028fdbc539551fec 137 PANTHER PTHR11699:SF210 10 135 8.6E-73 T 22-04-2016 VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 SUPERFAMILY SSF51230 522 594 4.58E-20 T 22-04-2016 IPR011053 Single hybrid motif VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 SUPERFAMILY SSF51569 1 300 1.08E-90 T 22-04-2016 VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 Pfam PF00682 HMGL-like 6 270 2.4E-60 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 22-04-2016 IPR001882 Biotin-binding site VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 Pfam PF00364 Biotin-requiring enzyme 529 593 2.9E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 Gene3D G3DSA:3.20.20.70 2 282 3.8E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 SUPERFAMILY SSF89000 297 462 3.92E-51 T 22-04-2016 VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 PANTHER PTHR18866 7 588 2.0E-224 T 22-04-2016 VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 Pfam PF02436 Conserved carboxylase domain 292 494 1.3E-58 T 22-04-2016 IPR003379 Carboxylase, conserved domain VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 PANTHER PTHR18866:SF109 7 588 2.0E-224 T 22-04-2016 VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 589 5.1E-267 T 22-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VP2544 5cbdf9573de79dac8e4ca1b8896bdde9 595 Gene3D G3DSA:2.40.50.100 524 594 2.7E-24 T 22-04-2016 VP2482 41cc4911190d72caf2e4873376efebe3 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.9E-22 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP2482 41cc4911190d72caf2e4873376efebe3 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2482 41cc4911190d72caf2e4873376efebe3 327 Pfam PF00005 ABC transporter 26 181 8.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2482 41cc4911190d72caf2e4873376efebe3 327 SMART SM00382 34 231 1.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2482 41cc4911190d72caf2e4873376efebe3 327 Gene3D G3DSA:3.40.50.300 4 253 5.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2482 41cc4911190d72caf2e4873376efebe3 327 PANTHER PTHR24220 7 318 1.5E-135 T 22-04-2016 VP2482 41cc4911190d72caf2e4873376efebe3 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.1E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP2482 41cc4911190d72caf2e4873376efebe3 327 PANTHER PTHR24220:SF535 7 318 1.5E-135 T 22-04-2016 VP2482 41cc4911190d72caf2e4873376efebe3 327 SUPERFAMILY SSF52540 5 252 1.15E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1773 14e5831f2a3bf4dde06fdd1d93b0f93f 360 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 4.5E-118 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VP1773 14e5831f2a3bf4dde06fdd1d93b0f93f 360 PANTHER PTHR31377:SF0 1 360 3.8E-155 T 22-04-2016 VP1773 14e5831f2a3bf4dde06fdd1d93b0f93f 360 Gene3D G3DSA:3.75.10.10 3 360 7.3E-141 T 22-04-2016 VP1773 14e5831f2a3bf4dde06fdd1d93b0f93f 360 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 360 7.1E-172 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VP1773 14e5831f2a3bf4dde06fdd1d93b0f93f 360 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.923 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VP1773 14e5831f2a3bf4dde06fdd1d93b0f93f 360 PANTHER PTHR31377 1 360 3.8E-155 T 22-04-2016 VP1773 14e5831f2a3bf4dde06fdd1d93b0f93f 360 SUPERFAMILY SSF55909 3 360 9.1E-137 T 22-04-2016 VPA0426 6b4afab0e80599b0dff4febe9fcb3696 247 PANTHER PTHR11101 1 247 3.6E-142 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VPA0426 6b4afab0e80599b0dff4febe9fcb3696 247 PANTHER PTHR11101:SF63 1 247 3.6E-142 T 22-04-2016 VPA0426 6b4afab0e80599b0dff4febe9fcb3696 247 Pfam PF01384 Phosphate transporter family 1 247 8.2E-61 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VP2971 cb5353e69ac428cd10f0058d593a1267 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 22-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 VP2971 cb5353e69ac428cd10f0058d593a1267 111 PANTHER PTHR33154 7 96 3.9E-21 T 22-04-2016 VP2971 cb5353e69ac428cd10f0058d593a1267 111 SMART SM00418 5 83 6.5E-24 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP2971 cb5353e69ac428cd10f0058d593a1267 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 7.4E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP2971 cb5353e69ac428cd10f0058d593a1267 111 PANTHER PTHR33154:SF4 7 96 3.9E-21 T 22-04-2016 VP2971 cb5353e69ac428cd10f0058d593a1267 111 Gene3D G3DSA:1.10.10.10 5 86 9.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2971 cb5353e69ac428cd10f0058d593a1267 111 SUPERFAMILY SSF46785 5 85 1.47E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2971 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.2E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP2971 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.2E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP2971 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 5.2E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP2971 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 5.2E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.9E-19 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PANTHER PTHR11649:SF37 260 605 2.0E-251 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PANTHER PTHR11649:SF37 4 149 2.0E-251 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PANTHER PTHR11649:SF37 658 725 2.0E-251 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 6.2E-180 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 Pfam PF07670 Nucleoside recognition 509 690 2.8E-37 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 Pfam PF07670 Nucleoside recognition 349 440 2.0E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.4E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 SUPERFAMILY SSF52540 4 191 2.9E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0858 e1ef2a0b81548e10be459ec96f32d458 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 2.6E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 Pfam PF02421 Ferrous iron transport protein B 4 161 6.8E-59 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PANTHER PTHR11649 260 605 2.0E-251 T 22-04-2016 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PANTHER PTHR11649 4 149 2.0E-251 T 22-04-2016 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 PANTHER PTHR11649 658 725 2.0E-251 T 22-04-2016 VP0858 e1ef2a0b81548e10be459ec96f32d458 758 Gene3D G3DSA:3.40.50.300 4 168 1.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 SUPERFAMILY SSF88697 2 70 1.79E-17 T 22-04-2016 IPR015947 PUA-like domain VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 PANTHER PTHR30027 1 243 3.3E-100 T 22-04-2016 VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 4.9E-86 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 Gene3D G3DSA:2.40.240.20 1 71 2.2E-26 T 22-04-2016 VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 Gene3D G3DSA:3.40.1280.10 75 242 1.1E-60 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 PANTHER PTHR30027:SF3 1 243 3.3E-100 T 22-04-2016 VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 PIRSF PIRSF015601 2 242 6.8E-57 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 Pfam PF04452 RNA methyltransferase 19 236 2.5E-75 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP2610 6ed424dcb3af51a40da5a3c5d4cd0059 243 SUPERFAMILY SSF75217 75 242 3.79E-53 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VP1400 547c1a4fe291746a20ab258e58772a83 686 Gene3D G3DSA:1.10.510.10 175 260 3.0E-20 T 22-04-2016 VP1400 547c1a4fe291746a20ab258e58772a83 686 SUPERFAMILY SSF56112 80 266 8.09E-36 T 22-04-2016 IPR011009 Protein kinase-like domain VP1400 547c1a4fe291746a20ab258e58772a83 686 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 186 198 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VP1400 547c1a4fe291746a20ab258e58772a83 686 PANTHER PTHR24362 674 685 1.3E-20 T 22-04-2016 VP1400 547c1a4fe291746a20ab258e58772a83 686 PANTHER PTHR24362 112 258 1.3E-20 T 22-04-2016 VP1400 547c1a4fe291746a20ab258e58772a83 686 PANTHER PTHR24362:SF282 674 685 1.3E-20 T 22-04-2016 VP1400 547c1a4fe291746a20ab258e58772a83 686 PANTHER PTHR24362:SF282 112 258 1.3E-20 T 22-04-2016 VP1400 547c1a4fe291746a20ab258e58772a83 686 Pfam PF00069 Protein kinase domain 82 263 4.0E-29 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VP1400 547c1a4fe291746a20ab258e58772a83 686 SMART SM00220 65 324 1.0E-11 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VP1400 547c1a4fe291746a20ab258e58772a83 686 Gene3D G3DSA:3.30.200.20 59 174 8.6E-12 T 22-04-2016 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 SMART SM00028 71 104 1.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 SMART SM00028 288 321 41.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 SMART SM00028 148 181 1.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 Gene3D G3DSA:1.25.40.10 43 308 1.2E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 PANTHER PTHR23083:SF195 1 176 8.2E-17 T 22-04-2016 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 PANTHER PTHR23083:SF195 285 383 8.2E-17 T 22-04-2016 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 PANTHER PTHR23083:SF195 212 247 8.2E-17 T 22-04-2016 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 Pfam PF13181 Tetratricopeptide repeat 148 179 0.0029 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 SUPERFAMILY SSF48452 71 246 5.99E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 PANTHER PTHR23083 1 176 8.2E-17 T 22-04-2016 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 PANTHER PTHR23083 285 383 8.2E-17 T 22-04-2016 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 PANTHER PTHR23083 212 247 8.2E-17 T 22-04-2016 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 Gene3D G3DSA:1.25.40.10 309 384 1.0E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0162 29aa3c811beaab45a5f5ba916985eedf 404 SUPERFAMILY SSF48452 212 384 4.14E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0158 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 PANTHER PTHR12029:SF45 4 188 3.3E-65 T 22-04-2016 VP0158 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 PANTHER PTHR12029 4 188 3.3E-65 T 22-04-2016 VP0158 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 SUPERFAMILY SSF75217 4 173 5.76E-46 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VP0158 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Gene3D G3DSA:3.40.1280.10 2 175 3.1E-46 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VP0158 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 5.6E-25 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VP0158 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 7.9E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VP1838 36bf6a5bd7ccaad756e8e7ac27a4c74d 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 6.5E-14 T 22-04-2016 IPR021681 Protein of unknown function DUF3265 VP2648 827104ec0b495b826e925258148f0d6a 172 PANTHER PTHR13947 11 172 5.7E-56 T 22-04-2016 VP2648 827104ec0b495b826e925258148f0d6a 172 PANTHER PTHR13947:SF7 11 172 5.7E-56 T 22-04-2016 VP2648 827104ec0b495b826e925258148f0d6a 172 SUPERFAMILY SSF55729 15 172 2.4E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2648 827104ec0b495b826e925258148f0d6a 172 Pfam PF00583 Acetyltransferase (GNAT) family 72 150 1.0E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2648 827104ec0b495b826e925258148f0d6a 172 Gene3D G3DSA:3.40.630.30 13 172 2.1E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2756 74be6b7c61ed4059941f65d6242b1682 624 SUPERFAMILY SSF55729 466 584 7.85E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2756 74be6b7c61ed4059941f65d6242b1682 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.612 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2756 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.20.200.10 108 374 5.2E-103 T 22-04-2016 VP2756 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF00206 Lyase 6 301 4.4E-88 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VP2756 74be6b7c61ed4059941f65d6242b1682 624 SUPERFAMILY SSF48557 3 456 4.71E-142 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.25E-68 T 22-04-2016 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.25E-68 T 22-04-2016 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.25E-68 T 22-04-2016 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.25E-68 T 22-04-2016 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.25E-68 T 22-04-2016 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.25E-68 T 22-04-2016 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family VP2756 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family VP2756 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.10.40.30 375 432 9.6E-31 T 22-04-2016 VP2756 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:3.40.630.30 462 601 1.1E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2756 74be6b7c61ed4059941f65d6242b1682 624 PIRSF PIRSF036456 1 624 0.0 T 22-04-2016 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PANTHER PTHR11444 3 456 1.2E-238 T 22-04-2016 IPR000362 Fumarate lyase family VP2756 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF00583 Acetyltransferase (GNAT) family 508 571 2.2E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2756 74be6b7c61ed4059941f65d6242b1682 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 8.1E-204 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2756 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.4E-24 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2756 74be6b7c61ed4059941f65d6242b1682 624 PANTHER PTHR11444:SF3 3 456 1.2E-238 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VP2756 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.10.275.10 1 107 8.1E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VP2756 74be6b7c61ed4059941f65d6242b1682 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VP1363 8229eb3527dc04a264d04caa28afb9c1 268 SUPERFAMILY SSF52540 15 251 4.51E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1363 8229eb3527dc04a264d04caa28afb9c1 268 SMART SM00382 38 227 8.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1363 8229eb3527dc04a264d04caa28afb9c1 268 PANTHER PTHR24220:SF483 15 253 4.5E-75 T 22-04-2016 VP1363 8229eb3527dc04a264d04caa28afb9c1 268 Pfam PF00005 ABC transporter 29 178 2.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1363 8229eb3527dc04a264d04caa28afb9c1 268 Gene3D G3DSA:3.40.50.300 11 251 4.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1363 8229eb3527dc04a264d04caa28afb9c1 268 PANTHER PTHR24220 15 253 4.5E-75 T 22-04-2016 VP1363 8229eb3527dc04a264d04caa28afb9c1 268 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557 194 637 0.0 T 22-04-2016 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557 136 166 0.0 T 22-04-2016 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557 4 102 0.0 T 22-04-2016 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 597 56.307 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 Pfam PF01964 Radical SAM ThiC family 144 592 3.1E-199 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 Pfam PF13667 ThiC-associated domain 22 104 1.6E-34 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557:SF1 194 637 0.0 T 22-04-2016 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557:SF1 136 166 0.0 T 22-04-2016 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557:SF1 4 102 0.0 T 22-04-2016 VP3027 cb69184ce69a6d396514d66c0dd5d3f3 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 3.4E-219 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF02080 TrkA-C domain 293 349 2.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF02080 TrkA-C domain 209 276 5.7E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 SUPERFAMILY SSF116726 206 283 2.88E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF03600 Citrate transporter 32 518 4.9E-24 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283 1 31 2.3E-67 T 22-04-2016 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283 51 216 2.3E-67 T 22-04-2016 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283 284 364 2.3E-67 T 22-04-2016 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283 412 572 2.3E-67 T 22-04-2016 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 SUPERFAMILY SSF116726 290 349 5.1E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 Gene3D G3DSA:3.30.70.1450 208 286 1.2E-17 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 Gene3D G3DSA:3.30.70.1450 290 349 1.5E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283:SF79 1 31 2.3E-67 T 22-04-2016 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283:SF79 51 216 2.3E-67 T 22-04-2016 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283:SF79 284 364 2.3E-67 T 22-04-2016 VP0295 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283:SF79 412 572 2.3E-67 T 22-04-2016 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 625 1.0E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF02743 Cache domain 40 258 6.5E-34 T 22-04-2016 IPR033479 Double Cache domain 1 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 PANTHER PTHR32089 1 627 6.4E-285 T 22-04-2016 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF00672 HAMP domain 278 346 6.1E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00304 296 350 3.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00304 353 403 4.3 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 SUPERFAMILY SSF58104 318 627 9.02E-77 T 22-04-2016 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 Gene3D G3DSA:3.30.450.20 63 168 1.3E-30 T 22-04-2016 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 PANTHER PTHR32089:SF59 1 627 6.4E-285 T 22-04-2016 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 Gene3D G3DSA:1.10.287.950 380 597 3.8E-57 T 22-04-2016 VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 SUPERFAMILY SSF103190 89 175 2.62E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VP1904 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00283 365 626 7.1E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP0737 38e2821c7b045494d37c7172ade9b96a 363 PIRSF PIRSF006641 1 363 2.5E-157 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VP0737 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.10.20.30 268 363 1.5E-49 T 22-04-2016 IPR012675 Beta-grasp domain VP0737 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.40.50.300 201 267 8.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0737 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.40.50.300 4 131 8.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0737 38e2821c7b045494d37c7172ade9b96a 363 SUPERFAMILY SSF52540 3 301 1.59E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0737 38e2821c7b045494d37c7172ade9b96a 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.8E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0737 38e2821c7b045494d37c7172ade9b96a 363 SUPERFAMILY SSF81271 279 363 2.09E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VP0737 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:1.10.150.300 132 200 5.1E-26 T 22-04-2016 IPR023192 TGS-like domain VP0737 38e2821c7b045494d37c7172ade9b96a 363 PANTHER PTHR23305 1 363 2.8E-211 T 22-04-2016 VP0737 38e2821c7b045494d37c7172ade9b96a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.085 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VP0737 38e2821c7b045494d37c7172ade9b96a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.3E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 VP0737 38e2821c7b045494d37c7172ade9b96a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.6E-168 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VP0737 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.37E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0737 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.37E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0737 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.37E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0737 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.37E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 SUPERFAMILY SSF50494 43 265 5.06E-62 T 22-04-2016 IPR009003 Peptidase S1, PA clan VP0432 04ae05ff14e3b85d23d2f460fc023209 354 SMART SM00228 256 338 4.9E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 Pfam PF13365 Trypsin-like peptidase domain 82 215 4.8E-33 T 22-04-2016 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.30.42.10 258 352 1.8E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 PANTHER PTHR22939 1 351 4.1E-155 T 22-04-2016 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 Pfam PF13180 PDZ domain 257 346 4.0E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.40.10.10 146 257 4.3E-38 T 22-04-2016 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 SUPERFAMILY SSF50156 239 346 6.05E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.40.10.10 39 145 4.4E-35 T 22-04-2016 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 PANTHER PTHR22939:SF93 1 351 4.1E-155 T 22-04-2016 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VP0432 04ae05ff14e3b85d23d2f460fc023209 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 1.2E-166 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VP1217 16b7f7b55a10745569ee73be7a695d82 245 Pfam PF11140 Protein of unknown function (DUF2913) 29 240 3.3E-84 T 22-04-2016 IPR021316 Protein of unknown function DUF2913 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 SUPERFAMILY SSF51569 7 335 2.2E-145 T 22-04-2016 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 7.1E-142 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PIRSF PIRSF001415 2 336 1.8E-152 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 SMART SM01004 9 333 9.1E-246 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 Gene3D G3DSA:3.20.20.70 8 336 5.6E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0104 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PANTHER PTHR11458 9 342 3.3E-190 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VP0732 af62eb3992ed6f65058ecd3c58724ad2 365 Pfam PF02562 PhoH-like protein 120 323 4.6E-94 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 VP0732 af62eb3992ed6f65058ecd3c58724ad2 365 PANTHER PTHR30473 2 346 4.9E-205 T 22-04-2016 VP0732 af62eb3992ed6f65058ecd3c58724ad2 365 SUPERFAMILY SSF52540 119 320 9.27E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0732 af62eb3992ed6f65058ecd3c58724ad2 365 Gene3D G3DSA:3.40.50.300 120 323 3.5E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0732 af62eb3992ed6f65058ecd3c58724ad2 365 PANTHER PTHR30473:SF1 2 346 4.9E-205 T 22-04-2016 VP2959 fe34e575a141c30514ee20e46659e7da 194 PANTHER PTHR33508:SF4 1 193 1.3E-83 T 22-04-2016 VP2959 fe34e575a141c30514ee20e46659e7da 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 8.2E-30 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VP2959 fe34e575a141c30514ee20e46659e7da 194 PANTHER PTHR33508 1 193 1.3E-83 T 22-04-2016 VP2959 fe34e575a141c30514ee20e46659e7da 194 Pfam PF01914 MarC family integral membrane protein 3 192 1.8E-54 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 PANTHER PTHR11252 2 711 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF55666 146 236 1.33E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:1.10.10.400 227 314 5.5E-27 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 SMART SM00322 553 618 3.6E-11 T 22-04-2016 IPR004087 K Homology domain GO:0003676 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF00575 S1 RNA binding domain 620 691 1.9E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54791 555 640 5.06E-22 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF50249 621 704 2.4E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF00013 KH domain 558 615 1.9E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54211 293 489 1.16E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.230.70 315 543 1.3E-87 T 22-04-2016 IPR027408 PNPase/RNase PH domain VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.230.70 3 225 1.7E-80 T 22-04-2016 IPR027408 PNPase/RNase PH domain VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 PIRSF PIRSF005499 2 711 1.1E-296 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 SMART SM00316 621 691 3.3E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:2.40.50.140 619 694 1.3E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.8E-24 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.9E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.1370.10 553 618 5.1E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.135 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 PANTHER PTHR11252:SF0 2 711 0.0 T 22-04-2016 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF55666 451 549 3.23E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54211 5 145 5.57E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 3.8E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VP2452 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 4.3E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VP2660 93be22db89a161c43efe39f92aff81ea 106 Pfam PF13466 STAS domain 15 93 1.1E-19 T 22-04-2016 IPR002645 STAS domain VP2660 93be22db89a161c43efe39f92aff81ea 106 SUPERFAMILY SSF52091 14 97 8.83E-15 T 22-04-2016 IPR002645 STAS domain VP2660 93be22db89a161c43efe39f92aff81ea 106 Gene3D G3DSA:3.30.750.24 14 97 2.2E-12 T 22-04-2016 IPR002645 STAS domain VP2660 93be22db89a161c43efe39f92aff81ea 106 PANTHER PTHR35849 1 101 4.8E-33 T 22-04-2016 VP2660 93be22db89a161c43efe39f92aff81ea 106 PANTHER PTHR35849:SF1 1 101 4.8E-33 T 22-04-2016 VP1937 6c70e57ed1249907f225e201c2a1268d 410 PANTHER PTHR13939 1 289 6.1E-139 T 22-04-2016 VP1937 6c70e57ed1249907f225e201c2a1268d 410 Gene3D G3DSA:3.40.980.10 2 201 1.1E-25 T 22-04-2016 IPR001453 MoaB/Mog domain VP1937 6c70e57ed1249907f225e201c2a1268d 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 103.772 T 22-04-2016 IPR008135 Competence-induced protein CinA VP1937 6c70e57ed1249907f225e201c2a1268d 410 SUPERFAMILY SSF142433 252 386 2.09E-8 T 22-04-2016 IPR008136 CinA, C-terminal VP1937 6c70e57ed1249907f225e201c2a1268d 410 PIRSF PIRSF006728 1 391 5.6E-118 T 22-04-2016 IPR008135 Competence-induced protein CinA VP1937 6c70e57ed1249907f225e201c2a1268d 410 SMART SM00852 4 171 6.3E-30 T 22-04-2016 IPR001453 MoaB/Mog domain VP1937 6c70e57ed1249907f225e201c2a1268d 410 Pfam PF00994 Probable molybdopterin binding domain 4 169 2.1E-28 T 22-04-2016 IPR001453 MoaB/Mog domain VP1937 6c70e57ed1249907f225e201c2a1268d 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 403 2.9E-75 T 22-04-2016 IPR008135 Competence-induced protein CinA VP1937 6c70e57ed1249907f225e201c2a1268d 410 PANTHER PTHR13939:SF3 1 289 6.1E-139 T 22-04-2016 VP1937 6c70e57ed1249907f225e201c2a1268d 410 SUPERFAMILY SSF53218 2 204 3.8E-34 T 22-04-2016 IPR001453 MoaB/Mog domain VP2227 a546850871970878d725d96a1cc52695 259 Gene3D G3DSA:3.40.50.300 3 248 1.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2227 a546850871970878d725d96a1cc52695 259 PANTHER PTHR13696:SF69 1 251 1.7E-145 T 22-04-2016 VP2227 a546850871970878d725d96a1cc52695 259 PANTHER PTHR13696 1 251 1.7E-145 T 22-04-2016 VP2227 a546850871970878d725d96a1cc52695 259 SUPERFAMILY SSF52540 1 252 5.77E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2227 a546850871970878d725d96a1cc52695 259 Pfam PF13614 AAA domain 4 174 2.3E-50 T 22-04-2016 IPR025669 AAA domain VP0860 4f11093afd9f2c08a28c17e9bdd4fd6c 148 PANTHER PTHR23089:SF13 40 135 1.4E-17 T 22-04-2016 VP0860 4f11093afd9f2c08a28c17e9bdd4fd6c 148 PANTHER PTHR23089 40 135 1.4E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP0860 4f11093afd9f2c08a28c17e9bdd4fd6c 148 Pfam PF01230 HIT domain 17 105 3.4E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VP0860 4f11093afd9f2c08a28c17e9bdd4fd6c 148 SUPERFAMILY SSF54197 8 139 1.23E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP0860 4f11093afd9f2c08a28c17e9bdd4fd6c 148 PIRSF PIRSF000714 8 146 1.1E-53 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type VP0860 4f11093afd9f2c08a28c17e9bdd4fd6c 148 Gene3D G3DSA:3.30.428.10 5 139 1.3E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 1.3E-27 T 22-04-2016 IPR018076 Type II secretion system F domain VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 2.4E-33 T 22-04-2016 IPR018076 Type II secretion system F domain VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-18 T 22-04-2016 IPR003004 GspF/PilC family VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-18 T 22-04-2016 IPR003004 GspF/PilC family VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 1.0E-18 T 22-04-2016 IPR003004 GspF/PilC family VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 1.0E-18 T 22-04-2016 IPR003004 GspF/PilC family VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 PANTHER PTHR30012:SF0 9 407 2.2E-154 T 22-04-2016 VP2525 fcebae1e373418a946c1cb7c4f23ba32 407 PANTHER PTHR30012 9 407 2.2E-154 T 22-04-2016 VP0438 b4367cbfde6eb74c78cfd6a73a0327d8 142 SUPERFAMILY SSF52161 1 140 1.24E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VP0438 b4367cbfde6eb74c78cfd6a73a0327d8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.9E-66 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 VP0438 b4367cbfde6eb74c78cfd6a73a0327d8 142 PANTHER PTHR11545 1 142 1.0E-79 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VP0438 b4367cbfde6eb74c78cfd6a73a0327d8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VP0438 b4367cbfde6eb74c78cfd6a73a0327d8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VP0438 b4367cbfde6eb74c78cfd6a73a0327d8 142 PIRSF PIRSF002181 1 142 3.5E-53 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VP0438 b4367cbfde6eb74c78cfd6a73a0327d8 142 Pfam PF00572 Ribosomal protein L13 15 138 2.8E-57 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VP0438 b4367cbfde6eb74c78cfd6a73a0327d8 142 Gene3D G3DSA:3.90.1180.10 3 141 1.1E-65 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 291 8.9E-36 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 293 1.2E-78 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 PANTHER PTHR21708:SF24 1 297 5.3E-73 T 22-04-2016 VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 SUPERFAMILY SSF48179 168 291 4.42E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 Gene3D G3DSA:3.40.50.720 3 174 7.0E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 SUPERFAMILY SSF51735 3 166 4.45E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 PANTHER PTHR21708 1 297 5.3E-73 T 22-04-2016 VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 Gene3D G3DSA:1.10.1040.10 175 292 3.5E-43 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP2363 f21ce4541cdd825fdbbe6f119fd0803c 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 5.3E-30 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VP1019 8a599c097f24d68e9ce7db5313778df9 159 Pfam PF05433 Glycine zipper 2TM domain 64 101 5.1E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 VP1019 8a599c097f24d68e9ce7db5313778df9 159 PANTHER PTHR35603 28 159 4.1E-25 T 22-04-2016 VP0675 a402bedbbe33268b8daff57fd8670edb 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 31.562 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VP0675 a402bedbbe33268b8daff57fd8670edb 129 Pfam PF07417 Transcriptional regulator Crl 6 123 4.7E-49 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.4E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 Gene3D G3DSA:1.10.1740.10 313 399 3.6E-28 T 22-04-2016 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 SUPERFAMILY SSF55347 126 274 2.78E-62 T 22-04-2016 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 395 5.9E-161 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 PANTHER PTHR30525 1 401 1.6E-214 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 PIRSF PIRSF006205 1 401 3.9E-150 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.8E-45 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 Gene3D G3DSA:3.40.50.720 1 150 1.9E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2312 2f76ca964dbc02c8498839a2532a7a80 401 SUPERFAMILY SSF51735 2 150 4.26E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2312 2f76ca964dbc02c8498839a2532a7a80 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.1E-38 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.533 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VP2312 2f76ca964dbc02c8498839a2532a7a80 401 SUPERFAMILY SSF69055 302 399 1.14E-29 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VP0271 45105391f0f72787dbeb5ba6b8ee3184 130 SUPERFAMILY SSF56047 2 129 3.01E-44 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VP0271 45105391f0f72787dbeb5ba6b8ee3184 130 Gene3D G3DSA:3.30.1490.10 74 129 7.4E-29 T 22-04-2016 VP0271 45105391f0f72787dbeb5ba6b8ee3184 130 PANTHER PTHR11758 1 130 3.1E-58 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VP0271 45105391f0f72787dbeb5ba6b8ee3184 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.213 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VP0271 45105391f0f72787dbeb5ba6b8ee3184 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VP0271 45105391f0f72787dbeb5ba6b8ee3184 130 Gene3D G3DSA:3.30.1370.30 2 71 8.7E-25 T 22-04-2016 VP0271 45105391f0f72787dbeb5ba6b8ee3184 130 Pfam PF00410 Ribosomal protein S8 5 129 3.5E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VP2420 48e54ccb3c849bd554a11b3b5bb03630 251 SMART SM00858 44 106 1.1E-8 T 22-04-2016 IPR013974 SAF domain VP2420 48e54ccb3c849bd554a11b3b5bb03630 251 Pfam PF08666 SAF domain 45 105 4.5E-9 T 22-04-2016 IPR013974 SAF domain VP2420 48e54ccb3c849bd554a11b3b5bb03630 251 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 245 1.3E-73 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB VP2420 48e54ccb3c849bd554a11b3b5bb03630 251 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 216 5.4E-30 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VP2706 3a38f4d76abdcb6f91973b6813bafc44 216 Gene3D G3DSA:3.30.70.60 118 202 3.8E-6 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VP2706 3a38f4d76abdcb6f91973b6813bafc44 216 Pfam PF04612 Type II secretion system (T2SS), protein M 7 75 4.5E-8 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VP2348 85a3bd980ff96eea1e3fa3cbb8f797e1 210 PANTHER PTHR30586 2 210 3.7E-142 T 22-04-2016 VP2348 85a3bd980ff96eea1e3fa3cbb8f797e1 210 PANTHER PTHR30586:SF1 2 210 3.7E-142 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VP2348 85a3bd980ff96eea1e3fa3cbb8f797e1 210 PIRSF PIRSF006102 3 210 4.4E-73 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VP2348 85a3bd980ff96eea1e3fa3cbb8f797e1 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.5E-109 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VP2348 85a3bd980ff96eea1e3fa3cbb8f797e1 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.3E-62 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VP2348 85a3bd980ff96eea1e3fa3cbb8f797e1 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.857 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VP2030 ce423144d286918801206531909589aa 556 SMART SM00316 103 171 1.2E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2030 ce423144d286918801206531909589aa 556 SMART SM00316 190 260 6.0E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2030 ce423144d286918801206531909589aa 556 SMART SM00316 449 520 1.5E-19 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2030 ce423144d286918801206531909589aa 556 SMART SM00316 275 347 1.8E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2030 ce423144d286918801206531909589aa 556 SMART SM00316 362 434 1.9E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2030 ce423144d286918801206531909589aa 556 SMART SM00316 19 87 0.0012 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2030 ce423144d286918801206531909589aa 556 PANTHER PTHR10724:SF6 1 514 1.1E-275 T 22-04-2016 VP2030 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 357 439 2.8E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 347 438 6.34E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2030 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 189 260 1.6E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2030 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 449 520 8.7E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2030 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2030 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 103 171 5.8E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2030 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 362 434 1.1E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2030 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 429 540 2.61E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 PIRSF PIRSF002111 1 534 4.3E-218 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 255 360 2.29E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 8.3E-231 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP2030 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 102 172 1.2E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 PANTHER PTHR10724 1 514 1.1E-275 T 22-04-2016 VP2030 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 445 531 2.5E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 279 356 4.5E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 192 278 9.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 21 101 1.4E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2030 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1439 cd87b38b1ca26e3f75279246fed3e224 647 Pfam PF00012 Hsp70 protein 21 345 5.8E-16 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1439 cd87b38b1ca26e3f75279246fed3e224 647 SUPERFAMILY SSF53067 429 488 8.64E-27 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 SUPERFAMILY SSF53067 226 376 8.64E-27 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 PRINTS PR00301 70kDa heat shock protein signature 170 190 5.0E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1439 cd87b38b1ca26e3f75279246fed3e224 647 PRINTS PR00301 70kDa heat shock protein signature 19 32 5.0E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1439 cd87b38b1ca26e3f75279246fed3e224 647 PRINTS PR00301 70kDa heat shock protein signature 237 247 5.0E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family VP1439 cd87b38b1ca26e3f75279246fed3e224 647 PANTHER PTHR19375:SF176 18 74 8.5E-51 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 PANTHER PTHR19375:SF176 90 345 8.5E-51 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 231 244 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VP1439 cd87b38b1ca26e3f75279246fed3e224 647 Gene3D G3DSA:3.30.420.40 238 330 4.1E-19 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 SUPERFAMILY SSF53067 19 212 7.42E-27 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 PANTHER PTHR19375 18 74 8.5E-51 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 PANTHER PTHR19375 90 345 8.5E-51 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 23 30 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VP1439 cd87b38b1ca26e3f75279246fed3e224 647 Gene3D G3DSA:3.30.420.40 20 109 3.6E-31 T 22-04-2016 VP1439 cd87b38b1ca26e3f75279246fed3e224 647 Gene3D G3DSA:3.30.420.40 148 237 3.6E-31 T 22-04-2016 VP0244 b40083edfbbdbd2b8f79806cecff04ec 335 PANTHER PTHR30447 1 335 1.5E-177 T 22-04-2016 VP0244 b40083edfbbdbd2b8f79806cecff04ec 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 9.9E-166 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VP0244 b40083edfbbdbd2b8f79806cecff04ec 335 PANTHER PTHR30447:SF0 1 335 1.5E-177 T 22-04-2016 VP0244 b40083edfbbdbd2b8f79806cecff04ec 335 SUPERFAMILY SSF56655 1 324 2.5E-106 T 22-04-2016 VP0244 b40083edfbbdbd2b8f79806cecff04ec 335 Gene3D G3DSA:3.30.540.10 171 328 4.8E-45 T 22-04-2016 VP0244 b40083edfbbdbd2b8f79806cecff04ec 335 Gene3D G3DSA:3.30.540.10 1 170 1.8E-66 T 22-04-2016 VP0244 b40083edfbbdbd2b8f79806cecff04ec 335 PIRSF PIRSF004532 1 331 3.0E-134 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VP0244 b40083edfbbdbd2b8f79806cecff04ec 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 6.0E-128 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VP2269 6c57328b2f7ec621aafba6733169d766 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.22 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VP2269 6c57328b2f7ec621aafba6733169d766 378 PANTHER PTHR11014:SF106 1 376 4.7E-93 T 22-04-2016 VP2269 6c57328b2f7ec621aafba6733169d766 378 SUPERFAMILY SSF55031 181 291 2.69E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP2269 6c57328b2f7ec621aafba6733169d766 378 PANTHER PTHR11014 1 376 4.7E-93 T 22-04-2016 VP2269 6c57328b2f7ec621aafba6733169d766 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 2.2E-46 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VP2269 6c57328b2f7ec621aafba6733169d766 378 Gene3D G3DSA:3.40.630.10 318 376 9.4E-76 T 22-04-2016 VP2269 6c57328b2f7ec621aafba6733169d766 378 Gene3D G3DSA:3.40.630.10 4 189 9.4E-76 T 22-04-2016 VP2269 6c57328b2f7ec621aafba6733169d766 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VP2269 6c57328b2f7ec621aafba6733169d766 378 Pfam PF07687 Peptidase dimerisation domain 177 284 3.8E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP2269 6c57328b2f7ec621aafba6733169d766 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 5.8E-179 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VP2269 6c57328b2f7ec621aafba6733169d766 378 SUPERFAMILY SSF53187 6 180 5.74E-68 T 22-04-2016 VP2269 6c57328b2f7ec621aafba6733169d766 378 SUPERFAMILY SSF53187 294 376 5.74E-68 T 22-04-2016 VP2269 6c57328b2f7ec621aafba6733169d766 378 Gene3D G3DSA:3.30.70.360 190 290 1.5E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP1119 17a3c31d35d8d7deb14190d2ff874d97 139 Pfam PF12680 SnoaL-like domain 8 108 9.5E-13 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain VP1119 17a3c31d35d8d7deb14190d2ff874d97 139 SUPERFAMILY SSF54427 5 129 2.7E-23 T 22-04-2016 IPR032710 NTF2-like domain VP1119 17a3c31d35d8d7deb14190d2ff874d97 139 Gene3D G3DSA:3.10.450.50 4 134 2.7E-21 T 22-04-2016 IPR032710 NTF2-like domain VP3063 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:1.10.10.10 6 87 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP3063 629f83048d8fae13f24ef83182c5e9d3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.9E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP3063 629f83048d8fae13f24ef83182c5e9d3 300 Pfam PF03466 LysR substrate binding domain 90 287 3.6E-19 T 22-04-2016 IPR005119 LysR, substrate-binding VP3063 629f83048d8fae13f24ef83182c5e9d3 300 SUPERFAMILY SSF53850 90 291 9.77E-24 T 22-04-2016 VP3063 629f83048d8fae13f24ef83182c5e9d3 300 PANTHER PTHR30126 1 299 2.1E-153 T 22-04-2016 VP3063 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:3.40.190.10 90 172 3.9E-7 T 22-04-2016 VP3063 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:3.40.190.10 173 255 8.4E-7 T 22-04-2016 VP3063 629f83048d8fae13f24ef83182c5e9d3 300 SUPERFAMILY SSF46785 6 87 3.21E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP3063 629f83048d8fae13f24ef83182c5e9d3 300 PANTHER PTHR30126:SF18 1 299 2.1E-153 T 22-04-2016 VP0348 9e689f43d066ee384132aa5e7d6d7669 182 Pfam PF01569 PAP2 superfamily 73 180 2.1E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VP0348 9e689f43d066ee384132aa5e7d6d7669 182 PANTHER PTHR14969 23 179 2.1E-29 T 22-04-2016 VP0348 9e689f43d066ee384132aa5e7d6d7669 182 Gene3D G3DSA:1.20.144.10 7 178 2.2E-41 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VP0348 9e689f43d066ee384132aa5e7d6d7669 182 SMART SM00014 71 177 3.2E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VP0348 9e689f43d066ee384132aa5e7d6d7669 182 SUPERFAMILY SSF48317 12 179 3.79E-38 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VP0819 0b301bffa2d8fb5aba2d0e2a910a3f01 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 6.0E-95 T 22-04-2016 VP2076 7766204bb5ffb2109a2c17efa61a4c2c 486 SUPERFAMILY SSF55073 337 486 5.1E-37 T 22-04-2016 IPR029787 Nucleotide cyclase VP2076 7766204bb5ffb2109a2c17efa61a4c2c 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 2.2E-37 T 22-04-2016 IPR000160 GGDEF domain VP2076 7766204bb5ffb2109a2c17efa61a4c2c 486 PANTHER PTHR10799 207 484 2.6E-25 T 22-04-2016 VP2076 7766204bb5ffb2109a2c17efa61a4c2c 486 PANTHER PTHR10799:SF750 207 484 2.6E-25 T 22-04-2016 VP2076 7766204bb5ffb2109a2c17efa61a4c2c 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 484 2.4E-42 T 22-04-2016 IPR000160 GGDEF domain VP2076 7766204bb5ffb2109a2c17efa61a4c2c 486 SMART SM00267 321 486 8.5E-40 T 22-04-2016 IPR000160 GGDEF domain VP2076 7766204bb5ffb2109a2c17efa61a4c2c 486 Gene3D G3DSA:3.30.70.270 334 485 1.0E-41 T 22-04-2016 VPA1472 6ae90f4c134815aef404b5006de8f395 270 Pfam PF13439 Glycosyltransferase Family 4 10 127 6.4E-15 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VPA1472 6ae90f4c134815aef404b5006de8f395 270 Pfam PF00534 Glycosyl transferases group 1 133 267 2.3E-34 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPA1472 6ae90f4c134815aef404b5006de8f395 270 Gene3D G3DSA:3.40.50.2000 116 258 2.7E-29 T 22-04-2016 VPA1472 6ae90f4c134815aef404b5006de8f395 270 PANTHER PTHR12526 32 257 2.5E-39 T 22-04-2016 VPA1472 6ae90f4c134815aef404b5006de8f395 270 SUPERFAMILY SSF53756 22 265 1.99E-60 T 22-04-2016 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.079 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 PIRSF PIRSF004749 1 172 4.1E-57 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 PANTHER PTHR10458:SF10 1 168 1.0E-106 T 22-04-2016 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 SUPERFAMILY SSF56420 3 165 4.19E-63 T 22-04-2016 IPR023635 Peptide deformylase VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 3.5E-62 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 Pfam PF01327 Polypeptide deformylase 4 152 9.7E-51 T 22-04-2016 IPR023635 Peptide deformylase VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 120 149 7.5E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 89 100 7.5E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 101 119 7.5E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 33 62 7.5E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 PANTHER PTHR10458 1 168 1.0E-106 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VP3042 55ca7751ba0e80ffaa089a3b44850af4 172 Gene3D G3DSA:3.90.45.10 5 169 2.3E-64 T 22-04-2016 IPR023635 Peptide deformylase VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PANTHER PTHR11556 4 338 1.3E-187 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 Gene3D G3DSA:3.40.190.80 199 331 2.6E-60 T 22-04-2016 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PIRSF PIRSF500210 1 336 3.4E-129 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.9E-75 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 Gene3D G3DSA:3.30.540.10 5 198 1.8E-80 T 22-04-2016 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.15 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 PIRSF PIRSF000904 1 337 2.2E-126 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 VP0313 75a1b68650bb38d6b3b73a23761e88a3 338 SUPERFAMILY SSF56655 3 331 7.89E-115 T 22-04-2016 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 Pfam PF10502 Signal peptidase, peptidase S26 220 269 9.7E-8 T 22-04-2016 IPR019533 Peptidase S26 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 Pfam PF00717 Peptidase S24-like 86 161 5.6E-22 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 Gene3D G3DSA:2.170.230.10 154 231 1.3E-19 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 SUPERFAMILY SSF51306 78 298 5.23E-70 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 PANTHER PTHR12383:SF27 214 276 2.3E-103 T 22-04-2016 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 PANTHER PTHR12383:SF27 3 191 2.3E-103 T 22-04-2016 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 PANTHER PTHR12383 214 276 2.3E-103 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 PANTHER PTHR12383 3 191 2.3E-103 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 9.1E-48 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 Gene3D G3DSA:2.10.109.10 232 275 1.3E-55 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 Gene3D G3DSA:2.10.109.10 76 153 1.3E-55 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.4E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 4.4E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VP2573 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.4E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VP2766 163b5565b48decf16ad5bf5e0c3457d2 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VP2766 163b5565b48decf16ad5bf5e0c3457d2 106 SUPERFAMILY SSF47598 3 104 8.67E-57 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VP2766 163b5565b48decf16ad5bf5e0c3457d2 106 Hamap MF_00744 Met repressor [metJ]. 1 105 34.758 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VP2766 163b5565b48decf16ad5bf5e0c3457d2 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.5E-59 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VP2766 163b5565b48decf16ad5bf5e0c3457d2 106 Gene3D G3DSA:1.10.140.10 2 104 7.0E-63 T 22-04-2016 IPR023453 Methionine repressor MetJ domain VP1527 4cc30ebc8d52d8531b656c84478db7b2 256 PANTHER PTHR30222:SF6 1 256 1.5E-163 T 22-04-2016 VP1527 4cc30ebc8d52d8531b656c84478db7b2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1527 4cc30ebc8d52d8531b656c84478db7b2 256 Gene3D G3DSA:1.10.3720.10 3 254 1.3E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1527 4cc30ebc8d52d8531b656c84478db7b2 256 PANTHER PTHR30222 1 256 1.5E-163 T 22-04-2016 VP1527 4cc30ebc8d52d8531b656c84478db7b2 256 SUPERFAMILY SSF161098 4 254 4.67E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0474 9fd793e9916f6e6d9971af5242d69daa 259 PANTHER PTHR30269 3 255 6.8E-102 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP0474 9fd793e9916f6e6d9971af5242d69daa 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 3.2E-42 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP0474 9fd793e9916f6e6d9971af5242d69daa 259 PANTHER PTHR30269:SF0 3 255 6.8E-102 T 22-04-2016 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 SUPERFAMILY SSF47060 3 89 6.47E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 PANTHER PTHR23321 1 89 6.4E-46 T 22-04-2016 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 Gene3D G3DSA:1.10.287.10 3 89 5.2E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.2E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-36 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.754 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 SMART SM01387 8 88 7.7E-53 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2453 b089093ee1dd8ac912ad623eda7dd280 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-30 T 22-04-2016 VPA0489 f87fe8291092dac4e12fd205977560fb 308 SUPERFAMILY SSF51395 1 119 7.69E-37 T 22-04-2016 VPA0489 f87fe8291092dac4e12fd205977560fb 308 SUPERFAMILY SSF69336 130 308 5.1E-70 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPA0489 f87fe8291092dac4e12fd205977560fb 308 PANTHER PTHR11938 1 308 3.4E-174 T 22-04-2016 VPA0489 f87fe8291092dac4e12fd205977560fb 308 Gene3D G3DSA:2.160.20.60 136 308 9.5E-75 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPA0489 f87fe8291092dac4e12fd205977560fb 308 Gene3D G3DSA:3.20.20.70 1 118 2.2E-47 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPA0489 f87fe8291092dac4e12fd205977560fb 308 Pfam PF01645 Conserved region in glutamate synthase 1 82 1.4E-27 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VPA0489 f87fe8291092dac4e12fd205977560fb 308 Pfam PF01493 GXGXG motif 162 308 1.3E-67 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPA0489 f87fe8291092dac4e12fd205977560fb 308 PANTHER PTHR11938:SF1 1 308 3.4E-174 T 22-04-2016 VP1296 2e1c80d8e53918e2f4deb4727fba14a8 216 SUPERFAMILY SSF53335 3 214 2.13E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1296 2e1c80d8e53918e2f4deb4727fba14a8 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.992 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VP1296 2e1c80d8e53918e2f4deb4727fba14a8 216 Gene3D G3DSA:3.40.50.150 17 214 1.2E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1296 2e1c80d8e53918e2f4deb4727fba14a8 216 PANTHER PTHR10259 1 214 2.5E-96 T 22-04-2016 VP1296 2e1c80d8e53918e2f4deb4727fba14a8 216 PIRSF PIRSF023956 1 216 1.2E-73 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VP1296 2e1c80d8e53918e2f4deb4727fba14a8 216 PANTHER PTHR10259:SF16 1 214 2.5E-96 T 22-04-2016 VP1296 2e1c80d8e53918e2f4deb4727fba14a8 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.3E-79 T 22-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VP1296 2e1c80d8e53918e2f4deb4727fba14a8 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 1.6E-74 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 VP0642 135666c250e4967ca061bee867786ae3 165 PANTHER PTHR10642 18 162 3.5E-34 T 22-04-2016 VP0642 135666c250e4967ca061bee867786ae3 165 Pfam PF00075 RNase H 18 162 5.0E-31 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VP0642 135666c250e4967ca061bee867786ae3 165 SUPERFAMILY SSF53098 18 162 3.54E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0642 135666c250e4967ca061bee867786ae3 165 Gene3D G3DSA:3.30.420.10 15 162 7.0E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0475 e626f05074474469d3cce52f107eaa4b 286 Gene3D G3DSA:1.10.10.10 3 76 2.0E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0475 e626f05074474469d3cce52f107eaa4b 286 PANTHER PTHR30126:SF11 1 281 3.5E-45 T 22-04-2016 VP0475 e626f05074474469d3cce52f107eaa4b 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 6.9E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0475 e626f05074474469d3cce52f107eaa4b 286 SUPERFAMILY SSF53850 90 280 2.53E-17 T 22-04-2016 VP0475 e626f05074474469d3cce52f107eaa4b 286 SUPERFAMILY SSF46785 4 83 4.22E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0475 e626f05074474469d3cce52f107eaa4b 286 PANTHER PTHR30126 1 281 3.5E-45 T 22-04-2016 VP0475 e626f05074474469d3cce52f107eaa4b 286 Gene3D G3DSA:3.40.190.10 93 173 6.8E-5 T 22-04-2016 VP0475 e626f05074474469d3cce52f107eaa4b 286 Pfam PF03466 LysR substrate binding domain 91 276 1.5E-15 T 22-04-2016 IPR005119 LysR, substrate-binding VP2177 f90faade2ac3d8a11b3323ef1d296025 199 Pfam PF13662 Toprim domain 82 172 4.7E-23 T 22-04-2016 IPR006171 Toprim domain VP2177 f90faade2ac3d8a11b3323ef1d296025 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 4.1E-78 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VP2177 f90faade2ac3d8a11b3323ef1d296025 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.386 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VP2177 f90faade2ac3d8a11b3323ef1d296025 199 PANTHER PTHR30446:SF0 1 199 4.3E-115 T 22-04-2016 VP2177 f90faade2ac3d8a11b3323ef1d296025 199 SMART SM00493 81 166 1.3E-16 T 22-04-2016 IPR006171 Toprim domain VP2177 f90faade2ac3d8a11b3323ef1d296025 199 Pfam PF02132 RecR protein 40 77 2.3E-14 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger VP2177 f90faade2ac3d8a11b3323ef1d296025 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VP2177 f90faade2ac3d8a11b3323ef1d296025 199 PANTHER PTHR30446 1 199 4.3E-115 T 22-04-2016 VP2177 f90faade2ac3d8a11b3323ef1d296025 199 SUPERFAMILY SSF111304 2 199 2.35E-71 T 22-04-2016 IPR023627 Recombination protein RecR VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 SUPERFAMILY SSF55021 633 703 8.74E-7 T 22-04-2016 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 Gene3D G3DSA:3.30.460.10 178 324 1.9E-46 T 22-04-2016 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 2.2E-270 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 SMART SM00471 41 153 4.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 SMART SM00954 235 345 6.9E-59 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 Pfam PF13328 HD domain 28 175 5.7E-54 T 22-04-2016 IPR003607 HD/PDEase domain VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 22-04-2016 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 SUPERFAMILY SSF81301 180 393 2.13E-59 T 22-04-2016 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 Pfam PF02824 TGS domain 389 447 3.2E-19 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 PANTHER PTHR21262 3 706 0.0 T 22-04-2016 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 8.1E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 Pfam PF13291 ACT domain 627 703 8.7E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 PANTHER PTHR21262:SF0 3 706 0.0 T 22-04-2016 VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 Gene3D G3DSA:3.10.20.30 388 448 7.5E-20 T 22-04-2016 IPR012675 Beta-grasp domain VP0159 a76d2401eced19e8d3ad5371a89cdf37 706 Gene3D G3DSA:3.30.70.260 631 697 3.1E-8 T 22-04-2016 VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 SUPERFAMILY SSF52833 3 107 1.66E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 Pfam PF00085 Thioredoxin 5 106 7.5E-33 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 Gene3D G3DSA:3.40.30.10 2 107 8.6E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.5E-37 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 PIRSF PIRSF000077 2 108 8.5E-43 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 22-04-2016 VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 22-04-2016 VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 22-04-2016 VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 PANTHER PTHR10438 3 108 1.6E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VP3001 0816a04e2fe117c94c7c89d29cd801f4 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VP2710 5e981d14d8182fb301e85248212718d9 214 PANTHER PTHR26402:SF151 107 211 2.7E-18 T 22-04-2016 VP2710 5e981d14d8182fb301e85248212718d9 214 Gene3D G3DSA:1.10.10.10 129 210 2.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2710 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2710 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2710 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2710 5e981d14d8182fb301e85248212718d9 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 3.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2710 5e981d14d8182fb301e85248212718d9 214 PANTHER PTHR26402 107 211 2.7E-18 T 22-04-2016 VP2710 5e981d14d8182fb301e85248212718d9 214 SMART SM00421 151 208 2.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP2710 5e981d14d8182fb301e85248212718d9 214 SUPERFAMILY SSF46894 141 210 1.94E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP1994 34dd39b25755b0034087e27335e4c25e 174 PANTHER PTHR11080:SF37 1 163 8.5E-40 T 22-04-2016 VP1994 34dd39b25755b0034087e27335e4c25e 174 SUPERFAMILY SSF52499 2 169 8.37E-49 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VP1994 34dd39b25755b0034087e27335e4c25e 174 PANTHER PTHR11080 1 163 8.5E-40 T 22-04-2016 VP1994 34dd39b25755b0034087e27335e4c25e 174 Gene3D G3DSA:3.40.50.850 1 163 7.0E-46 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VP1994 34dd39b25755b0034087e27335e4c25e 174 Pfam PF00857 Isochorismatase family 4 159 9.4E-35 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SUPERFAMILY SSF52172 667 784 1.24E-35 T 22-04-2016 IPR011006 CheY-like superfamily VP2567 05cf9771c8bae7b14f55b443c014277e 932 SUPERFAMILY SSF47226 764 777 2.75E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SUPERFAMILY SSF47226 819 919 2.75E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2567 05cf9771c8bae7b14f55b443c014277e 932 Gene3D G3DSA:3.30.565.10 356 521 2.7E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2567 05cf9771c8bae7b14f55b443c014277e 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SUPERFAMILY SSF55874 344 516 1.1E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2567 05cf9771c8bae7b14f55b443c014277e 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 7.5E-53 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal VP2567 05cf9771c8bae7b14f55b443c014277e 932 SMART SM00304 198 250 3.1E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2567 05cf9771c8bae7b14f55b443c014277e 932 Pfam PF00672 HAMP domain 179 246 1.4E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SMART SM00388 290 355 2.9E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2567 05cf9771c8bae7b14f55b443c014277e 932 Gene3D G3DSA:1.20.120.160 831 931 1.3E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2567 05cf9771c8bae7b14f55b443c014277e 932 Pfam PF01627 Hpt domain 840 919 6.1E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PANTHER PTHR24423:SF540 192 230 3.8E-182 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PANTHER PTHR24423:SF540 269 571 3.8E-182 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PANTHER PTHR24423:SF540 6 20 3.8E-182 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PANTHER PTHR24423:SF540 667 833 3.8E-182 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.4E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2567 05cf9771c8bae7b14f55b443c014277e 932 Gene3D G3DSA:1.10.287.130 282 351 1.8E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SMART SM00387 402 518 3.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2567 05cf9771c8bae7b14f55b443c014277e 932 Gene3D G3DSA:3.40.50.2300 533 643 6.0E-5 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SMART SM00073 829 927 1.3E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.9E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP2567 05cf9771c8bae7b14f55b443c014277e 932 SMART SM00448 668 781 7.7E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PANTHER PTHR24423 192 230 3.8E-182 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PANTHER PTHR24423 269 571 3.8E-182 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PANTHER PTHR24423 6 20 3.8E-182 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 PANTHER PTHR24423 667 833 3.8E-182 T 22-04-2016 VP2567 05cf9771c8bae7b14f55b443c014277e 932 Pfam PF00072 Response regulator receiver domain 670 780 9.7E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2567 05cf9771c8bae7b14f55b443c014277e 932 SUPERFAMILY SSF52172 533 644 2.64E-8 T 22-04-2016 IPR011006 CheY-like superfamily VP2567 05cf9771c8bae7b14f55b443c014277e 932 Gene3D G3DSA:3.40.50.2300 667 784 1.6E-39 T 22-04-2016 VP2222 f7332c65e93f804812213a53266fc30b 222 PANTHER PTHR30070:SF1 2 222 9.2E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2222 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2222 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2222 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2222 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2222 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2222 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2222 f7332c65e93f804812213a53266fc30b 222 PIRSF PIRSF002764 1 222 4.5E-83 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VP2222 f7332c65e93f804812213a53266fc30b 222 PANTHER PTHR30070 2 222 9.2E-72 T 22-04-2016 VP2222 f7332c65e93f804812213a53266fc30b 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 8.0E-92 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VP2222 f7332c65e93f804812213a53266fc30b 222 Pfam PF03379 CcmB protein 5 219 7.8E-90 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1608 41782f3b01746912c0158f59a62c7dc6 157 SUPERFAMILY SSF55781 4 145 3.89E-39 T 22-04-2016 IPR029016 GAF domain-like VP1608 41782f3b01746912c0158f59a62c7dc6 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 22-04-2016 IPR000614 Free Met sulfoxide reductase conserved site VP1608 41782f3b01746912c0158f59a62c7dc6 157 Gene3D G3DSA:3.30.450.40 4 151 7.8E-49 T 22-04-2016 IPR029016 GAF domain-like VP1608 41782f3b01746912c0158f59a62c7dc6 157 PANTHER PTHR21021 3 140 1.5E-53 T 22-04-2016 VP1608 41782f3b01746912c0158f59a62c7dc6 157 Pfam PF13185 GAF domain 31 145 1.5E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 VP0377 37eecc9f00b4e080792aa77f9f0185c5 241 SMART SM00342 146 228 2.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP0377 37eecc9f00b4e080792aa77f9f0185c5 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 182 224 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VP0377 37eecc9f00b4e080792aa77f9f0185c5 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 2.5E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP0377 37eecc9f00b4e080792aa77f9f0185c5 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 2.5E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP0377 37eecc9f00b4e080792aa77f9f0185c5 241 PANTHER PTHR11019 87 236 6.2E-25 T 22-04-2016 VP0377 37eecc9f00b4e080792aa77f9f0185c5 241 Gene3D G3DSA:1.10.10.60 181 229 1.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0377 37eecc9f00b4e080792aa77f9f0185c5 241 Pfam PF12833 Helix-turn-helix domain 153 229 8.0E-14 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP0377 37eecc9f00b4e080792aa77f9f0185c5 241 SUPERFAMILY SSF46689 182 229 4.93E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1688 5f53a683ff49db84408e146433053352 212 PANTHER PTHR34982:SF2 1 209 2.4E-58 T 22-04-2016 VP1688 5f53a683ff49db84408e146433053352 212 PANTHER PTHR34982 1 209 2.4E-58 T 22-04-2016 VP1688 5f53a683ff49db84408e146433053352 212 Pfam PF02108 Flagellar assembly protein FliH 75 194 4.9E-17 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VP1688 5f53a683ff49db84408e146433053352 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 1.3E-41 T 22-04-2016 IPR012842 Type III secretion system HrpE/YscL VP0693 ccddb1d622b9078e79e90c2e187c79ae 207 Pfam PF12697 Alpha/beta hydrolase family 15 126 3.9E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP0693 ccddb1d622b9078e79e90c2e187c79ae 207 SUPERFAMILY SSF53474 6 202 7.44E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0693 ccddb1d622b9078e79e90c2e187c79ae 207 PANTHER PTHR13136 17 200 2.0E-51 T 22-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein VP0693 ccddb1d622b9078e79e90c2e187c79ae 207 PANTHER PTHR13136:SF4 17 200 2.0E-51 T 22-04-2016 VP0693 ccddb1d622b9078e79e90c2e187c79ae 207 Gene3D G3DSA:3.40.50.1820 11 179 1.0E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP2568 c579599d33014dcd05fec6235efcf87e 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 7.5E-22 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VP2568 c579599d33014dcd05fec6235efcf87e 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 3.0E-33 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VP2568 c579599d33014dcd05fec6235efcf87e 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 5.8E-44 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VP2568 c579599d33014dcd05fec6235efcf87e 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 2.0E-40 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VP2568 c579599d33014dcd05fec6235efcf87e 126 SUPERFAMILY SSF56214 3 125 1.7E-31 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VP2568 c579599d33014dcd05fec6235efcf87e 126 Gene3D G3DSA:3.90.470.20 1 125 1.8E-42 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VP2568 c579599d33014dcd05fec6235efcf87e 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.723 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VP2597 ae53f97e3dee1b9a691fa9df57789b77 163 Pfam PF04073 Aminoacyl-tRNA editing domain 42 149 2.3E-16 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2597 ae53f97e3dee1b9a691fa9df57789b77 163 SUPERFAMILY SSF55826 12 154 1.44E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2597 ae53f97e3dee1b9a691fa9df57789b77 163 Gene3D G3DSA:3.90.960.10 4 154 2.8E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP2261 96d4af3679fe05287783f86324ef631b 377 SUPERFAMILY SSF64518 5 376 1.44E-96 T 22-04-2016 VP2261 96d4af3679fe05287783f86324ef631b 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.3E-44 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2261 96d4af3679fe05287783f86324ef631b 377 Gene3D G3DSA:1.20.1330.10 279 332 9.7E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2261 96d4af3679fe05287783f86324ef631b 377 Gene3D G3DSA:1.20.1330.10 54 171 9.7E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2261 96d4af3679fe05287783f86324ef631b 377 Pfam PF07196 Flagellin hook IN motif 200 246 1.6E-10 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VP2261 96d4af3679fe05287783f86324ef631b 377 PANTHER PTHR30244 2 376 1.1E-157 T 22-04-2016 VP2261 96d4af3679fe05287783f86324ef631b 377 PANTHER PTHR30244:SF1 2 376 1.1E-157 T 22-04-2016 VP2261 96d4af3679fe05287783f86324ef631b 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 9.6E-24 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2261 96d4af3679fe05287783f86324ef631b 377 PRINTS PR00207 Flagellin signature 37 54 1.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP2261 96d4af3679fe05287783f86324ef631b 377 PRINTS PR00207 Flagellin signature 111 134 1.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP2261 96d4af3679fe05287783f86324ef631b 377 PRINTS PR00207 Flagellin signature 76 95 1.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP1211 338735817500a3f6cdf40c543f6aa039 449 SMART SM00387 342 448 1.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1211 338735817500a3f6cdf40c543f6aa039 449 Gene3D G3DSA:1.10.287.130 236 285 6.5E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1211 338735817500a3f6cdf40c543f6aa039 449 PANTHER PTHR24423 1 6 2.3E-48 T 22-04-2016 VP1211 338735817500a3f6cdf40c543f6aa039 449 PANTHER PTHR24423 185 437 2.3E-48 T 22-04-2016 VP1211 338735817500a3f6cdf40c543f6aa039 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 3.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1211 338735817500a3f6cdf40c543f6aa039 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1211 338735817500a3f6cdf40c543f6aa039 449 SUPERFAMILY SSF55874 308 444 6.02E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1211 338735817500a3f6cdf40c543f6aa039 449 PANTHER PTHR24423:SF496 1 6 2.3E-48 T 22-04-2016 VP1211 338735817500a3f6cdf40c543f6aa039 449 PANTHER PTHR24423:SF496 185 437 2.3E-48 T 22-04-2016 VP1211 338735817500a3f6cdf40c543f6aa039 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 445 1.2E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1211 338735817500a3f6cdf40c543f6aa039 449 Gene3D G3DSA:3.30.565.10 308 444 3.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1211 338735817500a3f6cdf40c543f6aa039 449 SUPERFAMILY SSF47384 224 289 1.14E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1179 b006caffd536aa44202389d070c74baa 188 Gene3D G3DSA:1.10.340.30 5 184 2.9E-77 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VP1179 b006caffd536aa44202389d070c74baa 188 Pfam PF03352 Methyladenine glycosylase 9 184 3.3E-72 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VP1179 b006caffd536aa44202389d070c74baa 188 PANTHER PTHR30037 7 183 1.4E-98 T 22-04-2016 VP1179 b006caffd536aa44202389d070c74baa 188 SUPERFAMILY SSF48150 5 186 5.81E-73 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VP1179 b006caffd536aa44202389d070c74baa 188 PANTHER PTHR30037:SF4 7 183 1.4E-98 T 22-04-2016 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 PANTHER PTHR13789 1 392 1.0E-167 T 22-04-2016 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 Pfam PF01494 FAD binding domain 4 337 2.0E-23 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 9.5E-146 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.6E-10 T 22-04-2016 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.6E-10 T 22-04-2016 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.6E-10 T 22-04-2016 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.6E-10 T 22-04-2016 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 SUPERFAMILY SSF51905 268 382 2.3E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 SUPERFAMILY SSF51905 3 178 2.3E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 Gene3D G3DSA:3.50.50.60 1 181 9.0E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 Gene3D G3DSA:3.50.50.60 279 318 9.0E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 1.3E-121 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VP2587 8448ff9ac9eee2f7ac96993ebafd2e77 392 PANTHER PTHR13789:SF214 1 392 1.0E-167 T 22-04-2016 VP1758 addfbf22cdfaa946f7c3ce9a7600f628 129 PANTHER PTHR23416:SF58 1 113 4.9E-47 T 22-04-2016 VP1758 addfbf22cdfaa946f7c3ce9a7600f628 129 Gene3D G3DSA:2.160.10.10 1 109 1.4E-43 T 22-04-2016 VP1758 addfbf22cdfaa946f7c3ce9a7600f628 129 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 50 85 5.4E-14 T 22-04-2016 IPR001451 Hexapeptide repeat VP1758 addfbf22cdfaa946f7c3ce9a7600f628 129 SUPERFAMILY SSF51161 1 116 2.91E-40 T 22-04-2016 IPR011004 Trimeric LpxA-like VP1758 addfbf22cdfaa946f7c3ce9a7600f628 129 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 59 87 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VP1758 addfbf22cdfaa946f7c3ce9a7600f628 129 PANTHER PTHR23416 1 113 4.9E-47 T 22-04-2016 VP0544 bf480d4ad4349d402e7661ae337aed91 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.665 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VP0544 bf480d4ad4349d402e7661ae337aed91 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 6 368 1.8E-166 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VP0544 bf480d4ad4349d402e7661ae337aed91 370 PANTHER PTHR30605 1 370 3.5E-200 T 22-04-2016 VP0544 bf480d4ad4349d402e7661ae337aed91 370 PANTHER PTHR30605:SF2 1 370 3.5E-200 T 22-04-2016 VP0544 bf480d4ad4349d402e7661ae337aed91 370 Gene3D G3DSA:3.30.420.40 6 197 2.9E-72 T 22-04-2016 VP0544 bf480d4ad4349d402e7661ae337aed91 370 SUPERFAMILY SSF53067 6 40 1.05E-28 T 22-04-2016 VP0544 bf480d4ad4349d402e7661ae337aed91 370 SUPERFAMILY SSF53067 67 112 1.05E-28 T 22-04-2016 VP0544 bf480d4ad4349d402e7661ae337aed91 370 SUPERFAMILY SSF53067 144 343 1.05E-28 T 22-04-2016 VP0799 13eeed9282291b052222b9a7740afc27 316 SUPERFAMILY SSF64383 180 312 1.96E-48 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VP0799 13eeed9282291b052222b9a7740afc27 316 PANTHER PTHR38685:SF1 1 316 4.1E-64 T 22-04-2016 VP0799 13eeed9282291b052222b9a7740afc27 316 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 308 3.9E-87 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VP0799 13eeed9282291b052222b9a7740afc27 316 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 180 307 1.5E-45 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VP0799 13eeed9282291b052222b9a7740afc27 316 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 310 24.639 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VP0799 13eeed9282291b052222b9a7740afc27 316 Gene3D G3DSA:3.30.1400.10 179 313 4.8E-57 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VP0799 13eeed9282291b052222b9a7740afc27 316 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 182 316 1.0E-76 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VP0799 13eeed9282291b052222b9a7740afc27 316 PANTHER PTHR38685 1 316 4.1E-64 T 22-04-2016 VP0799 13eeed9282291b052222b9a7740afc27 316 SMART SM00771 178 308 5.1E-72 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VP0931 48aefd042fd0cf276d3551f7e685df01 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 22-04-2016 IPR014748 Crontonase, C-terminal VP0931 48aefd042fd0cf276d3551f7e685df01 288 Gene3D G3DSA:3.90.226.10 25 225 1.5E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP0931 48aefd042fd0cf276d3551f7e685df01 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VP0931 48aefd042fd0cf276d3551f7e685df01 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 3.6E-78 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VP0931 48aefd042fd0cf276d3551f7e685df01 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.404 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0931 48aefd042fd0cf276d3551f7e685df01 288 SUPERFAMILY SSF52096 22 284 2.28E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP0931 48aefd042fd0cf276d3551f7e685df01 288 PANTHER PTHR11941:SF20 12 281 1.2E-194 T 22-04-2016 VP0931 48aefd042fd0cf276d3551f7e685df01 288 PANTHER PTHR11941 12 281 1.2E-194 T 22-04-2016 VP0931 48aefd042fd0cf276d3551f7e685df01 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 6.2E-145 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Pfam PF00575 S1 RNA binding domain 649 720 7.2E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Gene3D G3DSA:2.40.50.140 633 720 2.3E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Gene3D G3DSA:1.10.3500.10 110 322 2.9E-101 T 22-04-2016 IPR023323 Tex-like domain VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Gene3D G3DSA:1.10.3500.10 451 498 2.9E-101 T 22-04-2016 IPR023323 Tex-like domain VP0150 d7cb5c6950cb031aafa24afe227a8346 773 PANTHER PTHR10724 1 747 0.0 T 22-04-2016 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Gene3D G3DSA:3.30.420.140 327 450 1.2E-52 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 8.7E-56 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Gene3D G3DSA:1.10.10.650 1 109 1.7E-48 T 22-04-2016 IPR023319 Tex-like protein, HTH domain VP0150 d7cb5c6950cb031aafa24afe227a8346 773 SMART SM00316 649 720 1.2E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Gene3D G3DSA:1.10.150.310 499 630 2.3E-45 T 22-04-2016 IPR023097 Tex RuvX-like domain VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Pfam PF09371 Tex-like protein N-terminal domain 9 192 3.0E-72 T 22-04-2016 IPR018974 Tex-like protein, N-terminal VP0150 d7cb5c6950cb031aafa24afe227a8346 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 3.0E-27 T 22-04-2016 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 SUPERFAMILY SSF158832 3 321 2.62E-121 T 22-04-2016 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 SUPERFAMILY SSF47781 560 632 4.45E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 SUPERFAMILY SSF47781 470 557 1.33E-26 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 SUPERFAMILY SSF50249 638 723 4.1E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0150 d7cb5c6950cb031aafa24afe227a8346 773 SUPERFAMILY SSF53098 322 469 5.92E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 SMART SM00732 326 424 2.5E-38 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VP0150 d7cb5c6950cb031aafa24afe227a8346 773 PANTHER PTHR10724:SF1 1 747 0.0 T 22-04-2016 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 209 7.5E-39 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 SUPERFAMILY SSF51735 315 496 1.62E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Gene3D G3DSA:3.90.226.10 4 201 2.2E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Gene3D G3DSA:3.90.226.10 235 296 2.2E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 PANTHER PTHR23309 8 719 0.0 T 22-04-2016 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 SUPERFAMILY SSF52096 2 304 7.27E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 PANTHER PTHR23309:SF18 8 719 0.0 T 22-04-2016 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Gene3D G3DSA:1.10.1040.10 633 715 2.8E-19 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 SUPERFAMILY SSF48179 496 605 4.51E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.107 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 2.7E-26 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 710 8.6E-6 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Gene3D G3DSA:1.10.1040.10 499 593 5.7E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Gene3D G3DSA:3.40.50.720 305 498 3.0E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.4E-57 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP0030 4f04a02feb1dc0d2e98a4064ace23120 723 SUPERFAMILY SSF48179 625 715 1.02E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP3056 2447aa33935c050b39d74d5f2aca9e2b 318 SUPERFAMILY SSF56935 41 318 5.86E-5 T 22-04-2016 VP3056 2447aa33935c050b39d74d5f2aca9e2b 318 PIRSF PIRSF028696 1 318 4.6E-131 T 22-04-2016 IPR016896 Protein of unknown function DUF2860 VP3056 2447aa33935c050b39d74d5f2aca9e2b 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 317 9.6E-116 T 22-04-2016 IPR016896 Protein of unknown function DUF2860 VP0248 6950a5837dae6fc055af7b2698601bfc 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.75 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VP0248 6950a5837dae6fc055af7b2698601bfc 305 PANTHER PTHR13929:SF0 3 295 6.8E-83 T 22-04-2016 VP0248 6950a5837dae6fc055af7b2698601bfc 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 1.3E-98 T 22-04-2016 VP0248 6950a5837dae6fc055af7b2698601bfc 305 PIRSF PIRSF005355 1 303 6.5E-85 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 VP0248 6950a5837dae6fc055af7b2698601bfc 305 PANTHER PTHR13929 3 295 6.8E-83 T 22-04-2016 VP0248 6950a5837dae6fc055af7b2698601bfc 305 Pfam PF01040 UbiA prenyltransferase family 21 271 2.0E-39 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VP0198 474976988833c357f56e1f0010d9bc02 387 Gene3D G3DSA:3.40.640.10 23 279 1.6E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0198 474976988833c357f56e1f0010d9bc02 387 PANTHER PTHR30244:SF16 15 380 4.4E-118 T 22-04-2016 VP0198 474976988833c357f56e1f0010d9bc02 387 SUPERFAMILY SSF53383 23 382 5.98E-90 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0198 474976988833c357f56e1f0010d9bc02 387 PIRSF PIRSF000390 19 386 1.0E-86 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VP0198 474976988833c357f56e1f0010d9bc02 387 PANTHER PTHR30244 15 380 4.4E-118 T 22-04-2016 VP0198 474976988833c357f56e1f0010d9bc02 387 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 34 382 2.2E-80 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VP0198 474976988833c357f56e1f0010d9bc02 387 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 24 380 5.0E-163 T 22-04-2016 IPR026385 Aminotransferase, LLPSF_NHT_00031 family VP0198 474976988833c357f56e1f0010d9bc02 387 Gene3D G3DSA:3.90.1150.10 282 382 4.3E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 PANTHER PTHR30146:SF4 3 338 2.4E-92 T 22-04-2016 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 PANTHER PTHR30146 3 338 2.4E-92 T 22-04-2016 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 Pfam PF13377 Periplasmic binding protein-like domain 172 333 7.0E-34 T 22-04-2016 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 SUPERFAMILY SSF47413 3 60 1.27E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 SMART SM00354 4 74 7.4E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 SUPERFAMILY SSF53822 65 334 3.73E-60 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.2E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 Gene3D G3DSA:3.40.50.2300 63 172 1.0E-9 T 22-04-2016 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 Gene3D G3DSA:3.40.50.2300 173 334 7.1E-52 T 22-04-2016 VP2396 18608fc814582edb0bd01e0eeb9ad04b 341 Gene3D G3DSA:1.10.260.40 3 59 1.4E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1113 8593db38d4aa007087f08b5ebff46352 350 Pfam PF04055 Radical SAM superfamily 50 199 3.1E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP1113 8593db38d4aa007087f08b5ebff46352 350 PANTHER PTHR22976 4 350 1.5E-176 T 22-04-2016 VP1113 8593db38d4aa007087f08b5ebff46352 350 SMART SM00729 43 255 2.1E-40 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VP1113 8593db38d4aa007087f08b5ebff46352 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 3.5E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VP1113 8593db38d4aa007087f08b5ebff46352 350 SUPERFAMILY SSF102114 5 310 6.41E-90 T 22-04-2016 VP1113 8593db38d4aa007087f08b5ebff46352 350 Gene3D G3DSA:3.20.20.70 5 312 6.4E-103 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1113 8593db38d4aa007087f08b5ebff46352 350 PANTHER PTHR22976:SF1 4 350 1.5E-176 T 22-04-2016 VP1113 8593db38d4aa007087f08b5ebff46352 350 SMART SM00876 220 312 6.0E-46 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VP1113 8593db38d4aa007087f08b5ebff46352 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 5.8E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VP1113 8593db38d4aa007087f08b5ebff46352 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.777 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VP1113 8593db38d4aa007087f08b5ebff46352 350 PIRSF PIRSF001619 1 319 3.2E-138 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VP2040 6d314096f52f7623c2e617cac9fab1e7 383 SUPERFAMILY SSF52151 25 304 2.88E-35 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VP2040 6d314096f52f7623c2e617cac9fab1e7 383 PANTHER PTHR14226 13 221 1.7E-59 T 22-04-2016 VP2040 6d314096f52f7623c2e617cac9fab1e7 383 PANTHER PTHR14226 267 363 1.7E-59 T 22-04-2016 VP2040 6d314096f52f7623c2e617cac9fab1e7 383 Pfam PF01734 Patatin-like phospholipase 30 199 1.9E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VP2040 6d314096f52f7623c2e617cac9fab1e7 383 PANTHER PTHR14226:SF25 13 221 1.7E-59 T 22-04-2016 VP2040 6d314096f52f7623c2e617cac9fab1e7 383 PANTHER PTHR14226:SF25 267 363 1.7E-59 T 22-04-2016 VP2844 1d472f1b6aea74c8413316cce4404341 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 3.1E-38 T 22-04-2016 IPR001107 Band 7 domain VP2877 123250996b453b72c55eae2a92e9c053 209 PANTHER PTHR30231:SF7 1 204 1.1E-107 T 22-04-2016 VP2877 123250996b453b72c55eae2a92e9c053 209 PANTHER PTHR30231 1 204 1.1E-107 T 22-04-2016 VP2877 123250996b453b72c55eae2a92e9c053 209 Gene3D G3DSA:3.30.420.10 27 199 4.4E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2877 123250996b453b72c55eae2a92e9c053 209 SUPERFAMILY SSF53098 26 198 3.32E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2877 123250996b453b72c55eae2a92e9c053 209 SMART SM00479 29 202 5.1E-27 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP2877 123250996b453b72c55eae2a92e9c053 209 Pfam PF00929 Exonuclease 31 193 1.1E-18 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP0751 c71cbf1a01dfb4b57b3994eccca25122 193 PANTHER PTHR35562 4 185 1.3E-75 T 22-04-2016 VP0751 c71cbf1a01dfb4b57b3994eccca25122 193 PANTHER PTHR35562:SF2 4 185 1.3E-75 T 22-04-2016 VP0751 c71cbf1a01dfb4b57b3994eccca25122 193 Pfam PF01713 Smr domain 95 175 2.2E-21 T 22-04-2016 IPR002625 Smr domain VP0751 c71cbf1a01dfb4b57b3994eccca25122 193 SUPERFAMILY SSF160443 93 175 3.27E-14 T 22-04-2016 IPR002625 Smr domain VP0751 c71cbf1a01dfb4b57b3994eccca25122 193 SMART SM00463 92 175 1.6E-15 T 22-04-2016 IPR002625 Smr domain VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.907 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 Pfam PF01632 Ribosomal protein L35 2 61 2.9E-21 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 6.2E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.2E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 6.2E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.9E-27 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 PANTHER PTHR33343 1 64 4.2E-26 T 22-04-2016 VP1281 8b4ab027368fa78b8b2a5d859c90803e 64 SUPERFAMILY SSF143034 2 63 1.96E-20 T 22-04-2016 VP2018 e1a6ec9cf5fb291ead2821b9bd385370 548 PANTHER PTHR30462:SF2 1 548 9.5E-261 T 22-04-2016 VP2018 e1a6ec9cf5fb291ead2821b9bd385370 548 Pfam PF02470 MlaD protein 43 134 1.3E-9 T 22-04-2016 IPR003399 Mce/MlaD VP2018 e1a6ec9cf5fb291ead2821b9bd385370 548 Pfam PF02470 MlaD protein 287 391 1.1E-12 T 22-04-2016 IPR003399 Mce/MlaD VP2018 e1a6ec9cf5fb291ead2821b9bd385370 548 Pfam PF02470 MlaD protein 159 219 1.1E-7 T 22-04-2016 IPR003399 Mce/MlaD VP2018 e1a6ec9cf5fb291ead2821b9bd385370 548 PANTHER PTHR30462 1 548 9.5E-261 T 22-04-2016 VP0287 4c1d80c0e97bc8220a3828ea050db395 153 PANTHER PTHR23091:SF275 9 153 8.0E-45 T 22-04-2016 VP0287 4c1d80c0e97bc8220a3828ea050db395 153 SUPERFAMILY SSF55729 1 150 3.37E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0287 4c1d80c0e97bc8220a3828ea050db395 153 Pfam PF13673 Acetyltransferase (GNAT) domain 47 149 1.7E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP0287 4c1d80c0e97bc8220a3828ea050db395 153 Gene3D G3DSA:3.40.630.30 3 148 3.7E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0287 4c1d80c0e97bc8220a3828ea050db395 153 PANTHER PTHR23091 9 153 8.0E-45 T 22-04-2016 VP1468 5e25983ec67c119f751446286fd3cbb0 356 Gene3D G3DSA:3.40.50.2000 187 331 3.0E-20 T 22-04-2016 VP1468 5e25983ec67c119f751446286fd3cbb0 356 Pfam PF13439 Glycosyltransferase Family 4 25 168 1.2E-14 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VP1468 5e25983ec67c119f751446286fd3cbb0 356 Pfam PF00534 Glycosyl transferases group 1 189 331 2.1E-24 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VP1468 5e25983ec67c119f751446286fd3cbb0 356 SUPERFAMILY SSF53756 19 350 2.11E-56 T 22-04-2016 VP1468 5e25983ec67c119f751446286fd3cbb0 356 PANTHER PTHR12526:SF374 16 343 1.2E-37 T 22-04-2016 VP1468 5e25983ec67c119f751446286fd3cbb0 356 PANTHER PTHR12526 16 343 1.2E-37 T 22-04-2016 VP2926 01b3498404570ece5f10b2e26c0999d1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.525 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VP2926 01b3498404570ece5f10b2e26c0999d1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 9.0E-15 T 22-04-2016 VP2926 01b3498404570ece5f10b2e26c0999d1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.4E-64 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 VP2926 01b3498404570ece5f10b2e26c0999d1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.4E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VP2926 01b3498404570ece5f10b2e26c0999d1 142 PANTHER PTHR11661 1 142 8.3E-72 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VP2926 01b3498404570ece5f10b2e26c0999d1 142 Gene3D G3DSA:3.30.1550.10 2 72 2.4E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VP2926 01b3498404570ece5f10b2e26c0999d1 142 Gene3D G3DSA:1.10.10.250 73 141 1.0E-29 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VP2926 01b3498404570ece5f10b2e26c0999d1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.7E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VP2926 01b3498404570ece5f10b2e26c0999d1 142 SUPERFAMILY SSF54747 3 73 1.06E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VP2926 01b3498404570ece5f10b2e26c0999d1 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VP2926 01b3498404570ece5f10b2e26c0999d1 142 SMART SM00649 9 141 2.1E-81 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VP2926 01b3498404570ece5f10b2e26c0999d1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 VPA0770 e373a1d7e1cd035dfc50aadad165dfb9 156 PANTHER PTHR11451 2 153 1.9E-42 T 22-04-2016 VPA0770 e373a1d7e1cd035dfc50aadad165dfb9 156 Gene3D G3DSA:3.40.50.620 7 73 1.1E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPA0770 e373a1d7e1cd035dfc50aadad165dfb9 156 SUPERFAMILY SSF52374 1 141 1.66E-51 T 22-04-2016 VPA0770 e373a1d7e1cd035dfc50aadad165dfb9 156 Gene3D G3DSA:1.10.1160.10 76 156 1.1E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VPA0770 e373a1d7e1cd035dfc50aadad165dfb9 156 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 1 148 4.0E-51 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VP1700 799108d414bd1205d308454aaca197f1 138 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 129 6.1E-15 T 22-04-2016 VP1700 799108d414bd1205d308454aaca197f1 138 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 8 138 6.2E-55 T 22-04-2016 IPR013400 Type III secretion system chaperone, YscW VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.8E-29 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 PANTHER PTHR10520 1 426 1.2E-292 T 22-04-2016 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF51246 329 424 3.4E-33 T 22-04-2016 IPR011054 Rudiment single hybrid motif VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF52440 1 103 7.91E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.35 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.8E-35 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.4E-186 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 SMART SM01209 103 296 1.5E-142 T 22-04-2016 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.2E-83 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 SMART SM01210 330 423 2.7E-55 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF56059 104 322 3.18E-68 T 22-04-2016 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.40.50.20 2 95 1.3E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.30.1490.20 121 190 4.7E-34 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.30.470.20 191 328 6.2E-66 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP2898 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.90.600.10 330 423 3.8E-36 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VP3019 4abb12192e19df1d624f72b2d79c12b1 386 Gene3D G3DSA:1.20.1250.20 200 372 2.3E-6 T 22-04-2016 VP3019 4abb12192e19df1d624f72b2d79c12b1 386 Gene3D G3DSA:1.20.1250.20 2 184 2.3E-33 T 22-04-2016 VP3019 4abb12192e19df1d624f72b2d79c12b1 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 370 2.8E-69 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VP3019 4abb12192e19df1d624f72b2d79c12b1 386 PANTHER PTHR23502 1 371 5.9E-109 T 22-04-2016 VP3019 4abb12192e19df1d624f72b2d79c12b1 386 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VP3019 4abb12192e19df1d624f72b2d79c12b1 386 PANTHER PTHR23502:SF19 1 371 5.9E-109 T 22-04-2016 VP3019 4abb12192e19df1d624f72b2d79c12b1 386 Pfam PF07690 Major Facilitator Superfamily 5 341 1.3E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP3019 4abb12192e19df1d624f72b2d79c12b1 386 SUPERFAMILY SSF103473 2 372 4.05E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP1957 72c54b0548484403706500fb75c8d001 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.7E-46 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VP1957 72c54b0548484403706500fb75c8d001 196 PANTHER PTHR11922:SF25 1 189 1.3E-85 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.9E-34 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.9E-34 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.9E-34 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.9E-34 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.9E-34 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.9E-34 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 Gene3D G3DSA:3.40.50.880 3 190 3.1E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.1E-13 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.1E-13 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.1E-13 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.2E-5 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.2E-5 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 PANTHER PTHR11922 1 189 1.3E-85 T 22-04-2016 VP1957 72c54b0548484403706500fb75c8d001 196 SUPERFAMILY SSF52317 3 192 2.21E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1957 72c54b0548484403706500fb75c8d001 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 1.3E-54 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 SUPERFAMILY SSF53671 4 307 1.26E-102 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 1.2E-33 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.4E-118 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 5.4E-43 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 Gene3D G3DSA:3.40.50.1370 147 292 8.0E-57 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PANTHER PTHR11405 1 305 6.8E-145 T 22-04-2016 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.3E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.3E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.3E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.3E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 PANTHER PTHR11405:SF16 1 305 6.8E-145 T 22-04-2016 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 Gene3D G3DSA:3.40.50.1370 8 146 4.8E-51 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VP2654 a50caf1f05a04da02b1130b8b50b1cd3 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.972 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPA0719 c750a0372b900298a9a9d6a3558c7e46 94 SUPERFAMILY SSF53383 1 93 8.14E-36 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPA0719 c750a0372b900298a9a9d6a3558c7e46 94 PANTHER PTHR11680:SF9 2 94 1.3E-64 T 22-04-2016 VPA0719 c750a0372b900298a9a9d6a3558c7e46 94 Gene3D G3DSA:3.90.1150.10 1 93 7.1E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPA0719 c750a0372b900298a9a9d6a3558c7e46 94 PANTHER PTHR11680 2 94 1.3E-64 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VPA0719 c750a0372b900298a9a9d6a3558c7e46 94 Pfam PF00464 Serine hydroxymethyltransferase 2 93 1.2E-38 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VP2032 752aaf1f7f04a232f253bb02678e69c3 353 Gene3D G3DSA:3.90.226.10 275 311 7.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2032 752aaf1f7f04a232f253bb02678e69c3 353 Gene3D G3DSA:3.90.226.10 102 209 7.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2032 752aaf1f7f04a232f253bb02678e69c3 353 PANTHER PTHR33209:SF2 1 353 5.5E-197 T 22-04-2016 VP2032 752aaf1f7f04a232f253bb02678e69c3 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 1.0E-56 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VP2032 752aaf1f7f04a232f253bb02678e69c3 353 Pfam PF01343 Peptidase family S49 166 314 2.1E-47 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VP2032 752aaf1f7f04a232f253bb02678e69c3 353 SUPERFAMILY SSF52096 103 213 8.0E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2032 752aaf1f7f04a232f253bb02678e69c3 353 SUPERFAMILY SSF52096 244 303 8.0E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2032 752aaf1f7f04a232f253bb02678e69c3 353 PANTHER PTHR33209 1 353 5.5E-197 T 22-04-2016 VP0388 19100402c411f7ff292d2946ca48ce8d 496 PANTHER PTHR30195:SF2 123 453 7.4E-44 T 22-04-2016 VP0388 19100402c411f7ff292d2946ca48ce8d 496 PANTHER PTHR30195 123 453 7.4E-44 T 22-04-2016 VP0388 19100402c411f7ff292d2946ca48ce8d 496 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 320 2.2E-19 T 22-04-2016 VP0388 19100402c411f7ff292d2946ca48ce8d 496 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 267 279 2.2E-19 T 22-04-2016 VP0388 19100402c411f7ff292d2946ca48ce8d 496 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 162 178 2.2E-19 T 22-04-2016 VP0388 19100402c411f7ff292d2946ca48ce8d 496 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 200 2.2E-19 T 22-04-2016 VP0388 19100402c411f7ff292d2946ca48ce8d 496 Pfam PF12161 HsdM N-terminal domain 4 130 1.3E-15 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VP0388 19100402c411f7ff292d2946ca48ce8d 496 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 270 276 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP0388 19100402c411f7ff292d2946ca48ce8d 496 Pfam PF02384 N-6 DNA Methylase 140 452 1.4E-93 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VP0388 19100402c411f7ff292d2946ca48ce8d 496 SUPERFAMILY SSF53335 3 480 6.44E-123 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0388 19100402c411f7ff292d2946ca48ce8d 496 Gene3D G3DSA:3.40.50.150 164 397 3.2E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2365 f37ca78107b510c44b0739f78b911777 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VP2365 f37ca78107b510c44b0739f78b911777 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 9.4E-157 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VP2365 f37ca78107b510c44b0739f78b911777 403 Gene3D G3DSA:3.40.640.10 35 282 2.2E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP2365 f37ca78107b510c44b0739f78b911777 403 Pfam PF00266 Aminotransferase class-V 24 392 8.8E-151 T 22-04-2016 IPR000192 Aminotransferase class V domain VP2365 f37ca78107b510c44b0739f78b911777 403 PANTHER PTHR11601:SF17 5 403 2.3E-182 T 22-04-2016 VP2365 f37ca78107b510c44b0739f78b911777 403 PANTHER PTHR11601 5 403 2.3E-182 T 22-04-2016 VP2365 f37ca78107b510c44b0739f78b911777 403 SUPERFAMILY SSF53383 2 400 7.13E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP2365 f37ca78107b510c44b0739f78b911777 403 PIRSF PIRSF005572 21 403 2.0E-52 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VP2365 f37ca78107b510c44b0739f78b911777 403 Gene3D G3DSA:3.90.1150.10 283 398 2.6E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2365 f37ca78107b510c44b0739f78b911777 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 7.6E-168 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 PANTHER PTHR11731:SF123 180 448 1.3E-121 T 22-04-2016 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 PANTHER PTHR11731:SF123 1 122 1.3E-121 T 22-04-2016 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 291 1.2E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 3.9E-14 T 22-04-2016 IPR011659 WD40-like Beta Propeller VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 2.8E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 Pfam PF04052 TolB amino-terminal domain 24 126 6.8E-36 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 447 1.9E-168 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 Gene3D G3DSA:2.130.10.10 173 448 2.2E-78 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 PANTHER PTHR11731 1 122 1.3E-121 T 22-04-2016 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 SUPERFAMILY SSF69304 176 448 1.44E-57 T 22-04-2016 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 PANTHER PTHR11731 180 448 1.3E-121 T 22-04-2016 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 SUPERFAMILY SSF52964 29 181 9.42E-42 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 Hamap MF_00671 Protein TolB [tolB]. 5 446 35.845 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VP1060 260d4a5cc907dea8faa94ce1aa2b9790 450 Gene3D G3DSA:3.40.50.10070 24 172 1.7E-52 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 SMART SM00922 116 213 7.8E-6 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 PANTHER PTHR13794 6 316 1.0E-84 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 SUPERFAMILY SSF51604 106 321 9.43E-47 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 Gene3D G3DSA:3.30.390.10 1 123 8.0E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 323 22.79 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 SUPERFAMILY SSF54826 1 100 1.77E-25 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 Pfam PF13378 Enolase C-terminal domain-like 125 279 6.6E-13 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 2.7E-109 T 22-04-2016 VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 Gene3D G3DSA:3.20.20.120 124 303 3.8E-44 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VP0932 cc0f7b017db152e4aa5fcc4af7afdfe9 329 PANTHER PTHR13794:SF8 6 316 1.0E-84 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VP0979 0989e0ddb261ec594319387e00d325e7 414 Pfam PF12704 MacB-like periplasmic core domain 30 235 3.0E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VP0979 0989e0ddb261ec594319387e00d325e7 414 PANTHER PTHR30489 1 414 4.4E-81 T 22-04-2016 VP0979 0989e0ddb261ec594319387e00d325e7 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 5.7E-215 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 VP0979 0989e0ddb261ec594319387e00d325e7 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 2.5E-157 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VP0979 0989e0ddb261ec594319387e00d325e7 414 PANTHER PTHR30489:SF0 1 414 4.4E-81 T 22-04-2016 VP0979 0989e0ddb261ec594319387e00d325e7 414 Pfam PF02687 FtsX-like permease family 274 407 8.5E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VP2688 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 PANTHER PTHR11746 122 186 3.0E-15 T 22-04-2016 VP2688 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Gene3D G3DSA:3.90.950.10 5 188 1.1E-69 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VP2688 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.755 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VP2688 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 5.9E-55 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VP2688 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Pfam PF02545 Maf-like protein 7 187 1.5E-60 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VP2688 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 SUPERFAMILY SSF52972 5 187 5.3E-63 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VP2688 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 PIRSF PIRSF006305 2 189 3.4E-57 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPA1541 d84376f571a61ea865e66d77e9838e8d 123 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 78 119 1.1E-10 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VPA1541 d84376f571a61ea865e66d77e9838e8d 123 PANTHER PTHR40572 2 122 3.1E-30 T 22-04-2016 VP0829 78b3d2a78de4db31ad703d8104929be8 378 Pfam PF01979 Amidohydrolase family 51 374 1.5E-37 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VP0829 78b3d2a78de4db31ad703d8104929be8 378 PANTHER PTHR11113 1 374 6.7E-168 T 22-04-2016 VP0829 78b3d2a78de4db31ad703d8104929be8 378 PIRSF PIRSF038994 1 378 1.3E-121 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VP0829 78b3d2a78de4db31ad703d8104929be8 378 Gene3D G3DSA:3.20.20.140 55 346 2.3E-100 T 22-04-2016 VP0829 78b3d2a78de4db31ad703d8104929be8 378 SUPERFAMILY SSF51338 1 53 1.5E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP0829 78b3d2a78de4db31ad703d8104929be8 378 PANTHER PTHR11113:SF7 1 374 6.7E-168 T 22-04-2016 VP0829 78b3d2a78de4db31ad703d8104929be8 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 7.9E-155 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VP0829 78b3d2a78de4db31ad703d8104929be8 378 Gene3D G3DSA:2.30.40.10 347 363 1.5E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP0829 78b3d2a78de4db31ad703d8104929be8 378 Gene3D G3DSA:2.30.40.10 2 54 1.5E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP0829 78b3d2a78de4db31ad703d8104929be8 378 SUPERFAMILY SSF51556 54 347 1.13E-101 T 22-04-2016 IPR032466 Metal-dependent hydrolase VP0535 884918cd09a5c50c8f522f3e641f2062 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 8.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VP0535 884918cd09a5c50c8f522f3e641f2062 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 8.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VP0535 884918cd09a5c50c8f522f3e641f2062 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 8.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VP0535 884918cd09a5c50c8f522f3e641f2062 169 PANTHER PTHR33695:SF1 12 169 2.1E-54 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VP0535 884918cd09a5c50c8f522f3e641f2062 169 Pfam PF01252 Signal peptidase (SPase) II 19 161 4.7E-37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VP0535 884918cd09a5c50c8f522f3e641f2062 169 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VP0535 884918cd09a5c50c8f522f3e641f2062 169 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 3.3E-49 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VP0535 884918cd09a5c50c8f522f3e641f2062 169 PANTHER PTHR33695 12 169 2.1E-54 T 22-04-2016 VP0535 884918cd09a5c50c8f522f3e641f2062 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.676 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VP1181 4616c0f8f2fbe1826809ffe840792121 309 Pfam PF00561 alpha/beta hydrolase fold 33 186 2.7E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP1181 4616c0f8f2fbe1826809ffe840792121 309 SUPERFAMILY SSF53474 28 305 1.01E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1181 4616c0f8f2fbe1826809ffe840792121 309 PANTHER PTHR11440 27 142 1.6E-16 T 22-04-2016 VP1181 4616c0f8f2fbe1826809ffe840792121 309 Gene3D G3DSA:3.40.50.1820 26 308 1.9E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1892 0c0f9998b42a03df46164b7035ce6e29 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 531 5.7E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1892 0c0f9998b42a03df46164b7035ce6e29 541 SMART SM00304 203 256 1.4E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1892 0c0f9998b42a03df46164b7035ce6e29 541 PANTHER PTHR32089:SF58 149 535 6.7E-152 T 22-04-2016 VP1892 0c0f9998b42a03df46164b7035ce6e29 541 SMART SM00283 271 532 6.9E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1892 0c0f9998b42a03df46164b7035ce6e29 541 PANTHER PTHR32089 149 535 6.7E-152 T 22-04-2016 VP1892 0c0f9998b42a03df46164b7035ce6e29 541 Gene3D G3DSA:1.10.287.950 286 501 1.7E-48 T 22-04-2016 VP1892 0c0f9998b42a03df46164b7035ce6e29 541 Pfam PF00672 HAMP domain 184 251 1.5E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1892 0c0f9998b42a03df46164b7035ce6e29 541 SUPERFAMILY SSF58104 224 533 4.32E-61 T 22-04-2016 VP0622 d266071fa3f7231e9335522055c41e83 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 1.0E-134 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PANTHER PTHR30330 345 494 7.5E-297 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PANTHER PTHR30330 1 329 7.5E-297 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 Pfam PF01235 Sodium:alanine symporter family 51 472 6.4E-149 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0622 d266071fa3f7231e9335522055c41e83 515 PANTHER PTHR30330:SF7 345 494 7.5E-297 T 22-04-2016 VP0622 d266071fa3f7231e9335522055c41e83 515 PANTHER PTHR30330:SF7 1 329 7.5E-297 T 22-04-2016 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 Gene3D G3DSA:2.40.10.10 49 145 6.4E-19 T 22-04-2016 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 Gene3D G3DSA:2.40.10.10 146 320 1.6E-25 T 22-04-2016 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 2.5E-15 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 2.5E-15 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 2.5E-15 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 364 384 1.7E-4 T 22-04-2016 IPR020008 GlyGly-CTERM domain VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 Pfam PF00089 Trypsin 48 315 1.8E-26 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 SMART SM00020 24 315 4.3E-25 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 PANTHER PTHR24260 50 369 8.0E-31 T 22-04-2016 VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 SUPERFAMILY SSF50494 48 320 3.32E-41 T 22-04-2016 IPR009003 Peptidase S1, PA clan VP0586 84b63f0cddb3face1fac3be11aefc2dd 386 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 PANTHER PTHR30093:SF9 4 146 7.1E-73 T 22-04-2016 VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 28 5.2E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 PANTHER PTHR30093 4 146 7.1E-73 T 22-04-2016 VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 SUPERFAMILY SSF54523 36 142 3.19E-38 T 22-04-2016 VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 8.2E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.1E-42 T 22-04-2016 IPR013545 Type II secretion system protein G VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 Gene3D G3DSA:3.30.700.10 11 75 9.2E-9 T 22-04-2016 VP0136 c4bc8d99aaa3b679036114ba89e51a3f 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.7E-57 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VP2499 5a9a5fcdbc9d5f266a984c7590dbd50f 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 229 3.5E-77 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VP2499 5a9a5fcdbc9d5f266a984c7590dbd50f 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.554 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VP2499 5a9a5fcdbc9d5f266a984c7590dbd50f 238 PANTHER PTHR30545:SF2 1 228 8.2E-85 T 22-04-2016 VP2499 5a9a5fcdbc9d5f266a984c7590dbd50f 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 1.2E-75 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VP2499 5a9a5fcdbc9d5f266a984c7590dbd50f 238 PANTHER PTHR30545 1 228 8.2E-85 T 22-04-2016 VP1461 5c52c6a1ff8beebabd2c66dc0d38ccae 357 Gene3D G3DSA:3.40.50.2000 158 324 1.3E-30 T 22-04-2016 VP1461 5c52c6a1ff8beebabd2c66dc0d38ccae 357 PANTHER PTHR12526 1 38 5.0E-46 T 22-04-2016 VP1461 5c52c6a1ff8beebabd2c66dc0d38ccae 357 PANTHER PTHR12526 55 350 5.0E-46 T 22-04-2016 VP1461 5c52c6a1ff8beebabd2c66dc0d38ccae 357 SUPERFAMILY SSF53756 2 350 3.14E-70 T 22-04-2016 VP1461 5c52c6a1ff8beebabd2c66dc0d38ccae 357 Pfam PF13439 Glycosyltransferase Family 4 11 169 2.0E-19 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VP1461 5c52c6a1ff8beebabd2c66dc0d38ccae 357 Pfam PF00534 Glycosyl transferases group 1 175 326 3.3E-36 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VP1825 da487097cc87993d9e9c4e9b740ad561 256 SUPERFAMILY SSF54631 123 252 1.12E-10 T 22-04-2016 VP1825 da487097cc87993d9e9c4e9b740ad561 256 Pfam PF00571 CBS domain 120 168 0.0012 T 22-04-2016 IPR000644 CBS domain VP1825 da487097cc87993d9e9c4e9b740ad561 256 Gene3D G3DSA:3.10.580.10 120 252 2.5E-9 T 22-04-2016 VP1263 b69f0d93431f5059a889d3647fddc35a 367 PANTHER PTHR11609:SF1 39 367 8.6E-72 T 22-04-2016 VP1263 b69f0d93431f5059a889d3647fddc35a 367 PANTHER PTHR11609 39 367 8.6E-72 T 22-04-2016 VP1263 b69f0d93431f5059a889d3647fddc35a 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 3.3E-215 T 22-04-2016 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VP1263 b69f0d93431f5059a889d3647fddc35a 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.476 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VP1263 b69f0d93431f5059a889d3647fddc35a 367 Pfam PF01259 SAICAR synthetase 22 294 1.4E-49 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VP1263 b69f0d93431f5059a889d3647fddc35a 367 Gene3D G3DSA:3.30.470.20 136 282 1.0E-41 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP1263 b69f0d93431f5059a889d3647fddc35a 367 Gene3D G3DSA:3.30.200.20 13 135 1.0E-33 T 22-04-2016 VP1263 b69f0d93431f5059a889d3647fddc35a 367 SUPERFAMILY SSF56104 14 344 1.41E-67 T 22-04-2016 VP1263 b69f0d93431f5059a889d3647fddc35a 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VP0809 24222f319dc39f18878aa78e463824b0 305 PANTHER PTHR11092 1 305 7.6E-139 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 VP0809 24222f319dc39f18878aa78e463824b0 305 PANTHER PTHR11092:SF0 1 305 7.6E-139 T 22-04-2016 VP0809 24222f319dc39f18878aa78e463824b0 305 SUPERFAMILY SSF51735 1 300 8.55E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0809 24222f319dc39f18878aa78e463824b0 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.7E-103 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 VP0809 24222f319dc39f18878aa78e463824b0 305 Gene3D G3DSA:3.90.25.10 202 289 7.9E-9 T 22-04-2016 VP0809 24222f319dc39f18878aa78e463824b0 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 2.9E-23 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VP0809 24222f319dc39f18878aa78e463824b0 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.2E-15 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 VP0809 24222f319dc39f18878aa78e463824b0 305 Gene3D G3DSA:3.40.50.720 1 201 7.2E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2316 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.005 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VP2316 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Pfam PF00696 Amino acid kinase family 11 219 6.1E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2316 ebbd96ee4e09ea22ef717643c4e1ef4b 243 SUPERFAMILY SSF53633 7 239 6.55E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2316 ebbd96ee4e09ea22ef717643c4e1ef4b 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.4E-102 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VP2316 ebbd96ee4e09ea22ef717643c4e1ef4b 243 PIRSF PIRSF005650 4 243 5.6E-89 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VP2316 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Gene3D G3DSA:3.40.1160.10 2 240 2.0E-87 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2316 ebbd96ee4e09ea22ef717643c4e1ef4b 243 PANTHER PTHR21499:SF23 4 239 1.0E-112 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VP2316 ebbd96ee4e09ea22ef717643c4e1ef4b 243 PANTHER PTHR21499 4 239 1.0E-112 T 22-04-2016 VP3020 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 184 280 2.8E-32 T 22-04-2016 VP3020 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:1.10.10.10 4 89 2.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP3020 287a445322cb18ba3ce0a637662362e6 313 PANTHER PTHR30118:SF9 1 313 2.6E-181 T 22-04-2016 VP3020 287a445322cb18ba3ce0a637662362e6 313 PANTHER PTHR30118 1 313 2.6E-181 T 22-04-2016 VP3020 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP3020 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP3020 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP3020 287a445322cb18ba3ce0a637662362e6 313 SUPERFAMILY SSF46785 7 86 2.01E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP3020 287a445322cb18ba3ce0a637662362e6 313 SUPERFAMILY SSF53850 92 306 1.0E-49 T 22-04-2016 VP3020 287a445322cb18ba3ce0a637662362e6 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.4E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP3020 287a445322cb18ba3ce0a637662362e6 313 Pfam PF03466 LysR substrate binding domain 97 308 3.2E-30 T 22-04-2016 IPR005119 LysR, substrate-binding VP3020 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 92 183 1.8E-21 T 22-04-2016 VP3020 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 284 307 1.8E-21 T 22-04-2016 VP2789 f8501f3b395171da03d3d40e8d176649 162 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 3.8E-28 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VP2789 f8501f3b395171da03d3d40e8d176649 162 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 6.2E-35 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VP0566 e83f80bf7eb0e0d62336ed8f693e6f96 84 Gene3D G3DSA:3.30.70.20 4 73 5.4E-17 T 22-04-2016 VP0566 e83f80bf7eb0e0d62336ed8f693e6f96 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP0566 e83f80bf7eb0e0d62336ed8f693e6f96 84 SUPERFAMILY SSF54862 4 72 5.59E-17 T 22-04-2016 VP0566 e83f80bf7eb0e0d62336ed8f693e6f96 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.5E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP0566 e83f80bf7eb0e0d62336ed8f693e6f96 84 PANTHER PTHR24960:SF38 1 81 3.5E-27 T 22-04-2016 VP0566 e83f80bf7eb0e0d62336ed8f693e6f96 84 PANTHER PTHR24960 1 81 3.5E-27 T 22-04-2016 VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 Gene3D G3DSA:4.10.1080.10 41 83 7.3E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 SUPERFAMILY SSF103088 64 193 2.22E-30 T 22-04-2016 IPR006665 OmpA-like domain VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 Pfam PF00691 OmpA family 93 188 1.6E-19 T 22-04-2016 IPR006665 OmpA-like domain VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 Gene3D G3DSA:3.30.1330.60 88 196 6.2E-31 T 22-04-2016 IPR006665 OmpA-like domain VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 PANTHER PTHR30128 39 212 1.9E-61 T 22-04-2016 VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 PANTHER PTHR30128:SF15 39 212 1.9E-61 T 22-04-2016 VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 PRINTS PR01021 OMPA domain signature 94 116 8.1E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 PRINTS PR01021 OMPA domain signature 124 139 8.1E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1632 8460398c8f94f5eea9e2769ab7d6d60a 214 PRINTS PR01021 OMPA domain signature 139 155 8.1E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP0476 314fc721af5109515e83594631336930 206 PANTHER PTHR30506 1 206 3.1E-94 T 22-04-2016 VP0476 314fc721af5109515e83594631336930 206 Pfam PF03458 UPF0126 domain 95 166 5.3E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VP0476 314fc721af5109515e83594631336930 206 Pfam PF03458 UPF0126 domain 8 81 4.6E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VP0476 314fc721af5109515e83594631336930 206 PANTHER PTHR30506:SF3 1 206 3.1E-94 T 22-04-2016 VP1329 ccc6eef183297d6b5774f84a2bfb65be 508 Pfam PF00171 Aldehyde dehydrogenase family 7 452 2.1E-48 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP1329 ccc6eef183297d6b5774f84a2bfb65be 508 Gene3D G3DSA:3.40.309.10 257 440 8.0E-51 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP1329 ccc6eef183297d6b5774f84a2bfb65be 508 Gene3D G3DSA:3.40.605.10 4 255 7.6E-47 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP1329 ccc6eef183297d6b5774f84a2bfb65be 508 SUPERFAMILY SSF53720 6 502 5.24E-102 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP1329 ccc6eef183297d6b5774f84a2bfb65be 508 PANTHER PTHR11699:SF10 8 505 3.1E-124 T 22-04-2016 VP1329 ccc6eef183297d6b5774f84a2bfb65be 508 PANTHER PTHR11699 8 505 3.1E-124 T 22-04-2016 VP2065 a8fc74d3c4f4f9cc10162f43925313dd 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 3.4E-68 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VP2065 a8fc74d3c4f4f9cc10162f43925313dd 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 7.7E-58 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VP2065 a8fc74d3c4f4f9cc10162f43925313dd 201 SUPERFAMILY SSF52540 12 201 4.56E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2065 a8fc74d3c4f4f9cc10162f43925313dd 201 Gene3D G3DSA:3.40.50.300 7 201 7.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2065 a8fc74d3c4f4f9cc10162f43925313dd 201 PIRSF PIRSF015617 6 201 2.5E-65 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VP2065 a8fc74d3c4f4f9cc10162f43925313dd 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.3E-7 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VP2065 a8fc74d3c4f4f9cc10162f43925313dd 201 PANTHER PTHR30069 1 201 3.4E-65 T 22-04-2016 VP2825 7861820a1f1f96bef96feb654283c501 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 284 8.7E-88 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VP2825 7861820a1f1f96bef96feb654283c501 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 50.387 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VP2825 7861820a1f1f96bef96feb654283c501 285 PANTHER PTHR10067 4 280 4.3E-120 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VP2825 7861820a1f1f96bef96feb654283c501 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 7.5E-63 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VP1896 537d57f2da7c215e80763f2355938d6b 463 SUPERFAMILY SSF46785 1 68 8.66E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1896 537d57f2da7c215e80763f2355938d6b 463 SUPERFAMILY SSF53383 91 462 3.81E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1896 537d57f2da7c215e80763f2355938d6b 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.7E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1896 537d57f2da7c215e80763f2355938d6b 463 Gene3D G3DSA:3.40.640.10 142 343 6.3E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1896 537d57f2da7c215e80763f2355938d6b 463 Pfam PF00155 Aminotransferase class I and II 143 458 6.9E-38 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VP1896 537d57f2da7c215e80763f2355938d6b 463 Gene3D G3DSA:1.10.10.10 2 67 1.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1896 537d57f2da7c215e80763f2355938d6b 463 Gene3D G3DSA:3.90.1150.10 344 462 9.4E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1896 537d57f2da7c215e80763f2355938d6b 463 PANTHER PTHR11751 82 461 1.3E-151 T 22-04-2016 VP1896 537d57f2da7c215e80763f2355938d6b 463 SMART SM00345 7 66 5.3E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP1896 537d57f2da7c215e80763f2355938d6b 463 PANTHER PTHR11751:SF314 82 461 1.3E-151 T 22-04-2016 VP1300 dc7832f57375d4cd38aaadc4bfa679f4 124 Pfam PF03788 LrgA family 25 115 1.9E-24 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 VP1300 dc7832f57375d4cd38aaadc4bfa679f4 124 PANTHER PTHR33931 1 123 5.7E-31 T 22-04-2016 VP1300 dc7832f57375d4cd38aaadc4bfa679f4 124 PANTHER PTHR33931:SF2 1 123 5.7E-31 T 22-04-2016 VP1300 dc7832f57375d4cd38aaadc4bfa679f4 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.866 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 VP2919 3b1324b1cf5517fa2cdc0baa74c09617 260 Gene3D G3DSA:3.90.79.10 98 251 1.4E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP2919 3b1324b1cf5517fa2cdc0baa74c09617 260 PANTHER PTHR22769 90 237 5.4E-58 T 22-04-2016 VP2919 3b1324b1cf5517fa2cdc0baa74c09617 260 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VP2919 3b1324b1cf5517fa2cdc0baa74c09617 260 PANTHER PTHR22769:SF7 90 237 5.4E-58 T 22-04-2016 VP2919 3b1324b1cf5517fa2cdc0baa74c09617 260 SUPERFAMILY SSF55811 63 248 1.7E-43 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP2919 3b1324b1cf5517fa2cdc0baa74c09617 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 260 41.723 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VP2919 3b1324b1cf5517fa2cdc0baa74c09617 260 Pfam PF00293 NUDIX domain 137 236 1.0E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VP2919 3b1324b1cf5517fa2cdc0baa74c09617 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 5.9E-9 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VP3023 a265cbde775b13b7012575ca3fa80043 255 PANTHER PTHR34266 1 253 5.2E-158 T 22-04-2016 VP3023 a265cbde775b13b7012575ca3fa80043 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.129 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VP3023 a265cbde775b13b7012575ca3fa80043 255 Gene3D G3DSA:3.20.20.70 1 252 4.3E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP3023 a265cbde775b13b7012575ca3fa80043 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 1.7E-110 T 22-04-2016 VP3023 a265cbde775b13b7012575ca3fa80043 255 SUPERFAMILY SSF110399 1 236 1.31E-86 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VP0968 4d683f8201f897a8ff44025130f80cb5 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 1.2E-106 T 22-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 VP0968 4d683f8201f897a8ff44025130f80cb5 293 Pfam PF01633 Choline/ethanolamine kinase 66 215 4.0E-12 T 22-04-2016 VP0968 4d683f8201f897a8ff44025130f80cb5 293 Gene3D G3DSA:3.90.1200.10 82 277 1.8E-18 T 22-04-2016 VP0968 4d683f8201f897a8ff44025130f80cb5 293 SUPERFAMILY SSF56112 25 273 2.48E-42 T 22-04-2016 IPR011009 Protein kinase-like domain VP0023 29e5144c676220cfc79e820602524b47 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 1.5E-20 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VP0023 29e5144c676220cfc79e820602524b47 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.4E-20 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VP0023 29e5144c676220cfc79e820602524b47 184 PANTHER PTHR12608 1 184 4.8E-41 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VP1307 36d3c3e6291444bfae82363534e40629 204 PANTHER PTHR23029 3 184 5.3E-29 T 22-04-2016 VP1307 36d3c3e6291444bfae82363534e40629 204 SUPERFAMILY SSF53254 1 189 3.64E-38 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VP1307 36d3c3e6291444bfae82363534e40629 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 186 3.5E-40 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VP1307 36d3c3e6291444bfae82363534e40629 204 Gene3D G3DSA:3.40.50.1240 5 186 1.5E-37 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VP1307 36d3c3e6291444bfae82363534e40629 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 182 1.5E-54 T 22-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VP1307 36d3c3e6291444bfae82363534e40629 204 SMART SM00855 5 154 4.3E-10 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VP1307 36d3c3e6291444bfae82363534e40629 204 PANTHER PTHR23029:SF1 3 184 5.3E-29 T 22-04-2016 VP0232 14db190714784e377c8c43d3a44c6f60 321 Gene3D G3DSA:3.30.470.20 188 304 2.4E-22 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP0232 14db190714784e377c8c43d3a44c6f60 321 Gene3D G3DSA:3.40.50.20 2 117 4.7E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP0232 14db190714784e377c8c43d3a44c6f60 321 Gene3D G3DSA:3.30.1490.20 118 183 5.0E-8 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP0232 14db190714784e377c8c43d3a44c6f60 321 SUPERFAMILY SSF56059 102 278 1.34E-16 T 22-04-2016 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 PANTHER PTHR11014:SF75 6 377 1.1E-201 T 22-04-2016 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 9.4E-128 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 Gene3D G3DSA:3.40.630.10 319 377 2.5E-60 T 22-04-2016 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 Gene3D G3DSA:3.40.630.10 5 185 2.5E-60 T 22-04-2016 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 Pfam PF07687 Peptidase dimerisation domain 174 285 9.4E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 PANTHER PTHR11014 6 377 1.1E-201 T 22-04-2016 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 SUPERFAMILY SSF55031 177 290 1.21E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 SUPERFAMILY SSF53187 3 176 1.49E-56 T 22-04-2016 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 SUPERFAMILY SSF53187 301 377 1.49E-56 T 22-04-2016 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 66.203 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 4.4E-32 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VP2760 8dc45d9a0c86e54ea31426253dc3440f 378 Gene3D G3DSA:3.30.70.360 186 287 1.7E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VP0817 770c99463c11d8f5abae93a0553e0221 92 PANTHER PTHR36417:SF1 1 90 2.2E-55 T 22-04-2016 VP0817 770c99463c11d8f5abae93a0553e0221 92 SUPERFAMILY SSF52833 5 87 2.46E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0817 770c99463c11d8f5abae93a0553e0221 92 PANTHER PTHR36417 1 90 2.2E-55 T 22-04-2016 VP0817 770c99463c11d8f5abae93a0553e0221 92 Pfam PF10262 Rdx family 6 78 1.4E-31 T 22-04-2016 IPR011893 Selenoprotein, Rdx type VP0817 770c99463c11d8f5abae93a0553e0221 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.0E-24 T 22-04-2016 IPR011893 Selenoprotein, Rdx type VP0817 770c99463c11d8f5abae93a0553e0221 92 Gene3D G3DSA:3.40.30.10 3 91 1.1E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2057 5882315ef4a9debd925eff32abe7b35d 341 Gene3D G3DSA:3.40.718.10 3 335 1.5E-127 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VP2057 5882315ef4a9debd925eff32abe7b35d 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.1E-101 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 VP2057 5882315ef4a9debd925eff32abe7b35d 341 PANTHER PTHR30100:SF1 2 341 9.0E-133 T 22-04-2016 VP2057 5882315ef4a9debd925eff32abe7b35d 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 137.986 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VP2057 5882315ef4a9debd925eff32abe7b35d 341 PANTHER PTHR30100 2 341 9.0E-133 T 22-04-2016 VP2057 5882315ef4a9debd925eff32abe7b35d 341 PIRSF PIRSF002465 2 339 1.3E-124 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VP2057 5882315ef4a9debd925eff32abe7b35d 341 SUPERFAMILY SSF53659 4 336 1.07E-102 T 22-04-2016 VP2057 5882315ef4a9debd925eff32abe7b35d 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 7.9E-107 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VP2505 2d0b0fac0a6b5275c6a7c23411ee9129 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP2505 2d0b0fac0a6b5275c6a7c23411ee9129 161 SUPERFAMILY SSF55083 1 159 1.12E-55 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP2505 2d0b0fac0a6b5275c6a7c23411ee9129 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 4.4E-47 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP2505 2d0b0fac0a6b5275c6a7c23411ee9129 161 PANTHER PTHR20941 1 159 8.0E-78 T 22-04-2016 VP2505 2d0b0fac0a6b5275c6a7c23411ee9129 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.3E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP2505 2d0b0fac0a6b5275c6a7c23411ee9129 161 Gene3D G3DSA:3.30.70.560 3 155 5.9E-60 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VP2967 f876b81d9e57ef6136eaf63e754d8aba 126 SUPERFAMILY SSF54403 43 115 1.02E-16 T 22-04-2016 VP2967 f876b81d9e57ef6136eaf63e754d8aba 126 Pfam PF00031 Cystatin domain 45 100 6.3E-9 T 22-04-2016 IPR000010 Cystatin domain GO:0004869 VP2967 f876b81d9e57ef6136eaf63e754d8aba 126 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 81 94 - T 22-04-2016 IPR018073 Proteinase inhibitor I25, cystatin, conserved site VP2967 f876b81d9e57ef6136eaf63e754d8aba 126 Gene3D G3DSA:3.10.450.10 43 115 7.5E-15 T 22-04-2016 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 Pfam PF00313 'Cold-shock' DNA-binding domain 10 73 3.6E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 PANTHER PTHR11544:SF52 6 78 3.0E-42 T 22-04-2016 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 PIRSF PIRSF002599 5 79 2.6E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 8 75 3.9E-41 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 SUPERFAMILY SSF50249 6 74 2.06E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1012 fe8880e798c77e50f5ab447b09336d5e 79 PRINTS PR00050 Cold shock protein signature 11 26 9.6E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 PRINTS PR00050 Cold shock protein signature 47 65 9.6E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 PRINTS PR00050 Cold shock protein signature 32 41 9.6E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 ProSitePatterns PS00352 'Cold-shock' domain signature. 22 41 - T 22-04-2016 IPR019844 Cold-shock conserved site VP1012 fe8880e798c77e50f5ab447b09336d5e 79 PANTHER PTHR11544 6 78 3.0E-42 T 22-04-2016 VP1012 fe8880e798c77e50f5ab447b09336d5e 79 Gene3D G3DSA:2.40.50.140 8 72 1.5E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1012 fe8880e798c77e50f5ab447b09336d5e 79 SMART SM00357 10 74 7.8E-25 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VP2607 461c66d24af026d1942db38c3445ba7a 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 1.4E-27 T 22-04-2016 IPR018692 Predicted integral membrane protein DUF2189 VP2857 51a89d94e0a81ca42110a43c0e8e24e2 170 Pfam PF07813 LTXXQ motif family protein 39 149 1.4E-25 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VP2857 51a89d94e0a81ca42110a43c0e8e24e2 170 PANTHER PTHR38102 2 170 1.8E-36 T 22-04-2016 VP2857 51a89d94e0a81ca42110a43c0e8e24e2 170 PANTHER PTHR38102:SF1 2 170 1.8E-36 T 22-04-2016 VP2857 51a89d94e0a81ca42110a43c0e8e24e2 170 PIRSF PIRSF034445 2 163 5.1E-21 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VP1070 b3a366f6d684ab2c7458edae6ad0dbd2 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-69 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VP1070 b3a366f6d684ab2c7458edae6ad0dbd2 149 Pfam PF06610 L-alanine exporter 8 142 1.4E-69 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VP1070 b3a366f6d684ab2c7458edae6ad0dbd2 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.974 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VP0868 52c8dd83b42870efa8efc7b921b9764f 185 PIRSF PIRSF004982 2 185 2.0E-62 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VP0868 52c8dd83b42870efa8efc7b921b9764f 185 PANTHER PTHR37530 1 158 6.7E-45 T 22-04-2016 VP0868 52c8dd83b42870efa8efc7b921b9764f 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 155 2.8E-35 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VP0868 52c8dd83b42870efa8efc7b921b9764f 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 163 1.0E-44 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VP2379 221d58badd8fd220e4f8d703d1e2d751 98 Pfam PF07130 YebG protein 1 71 2.1E-31 T 22-04-2016 IPR009813 Uncharacterised protein family YebG VP2379 221d58badd8fd220e4f8d703d1e2d751 98 Gene3D G3DSA:1.10.10.710 20 85 7.9E-24 T 22-04-2016 IPR009813 Uncharacterised protein family YebG VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 SUPERFAMILY SSF55816 366 542 1.96E-52 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 1.7E-23 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 4.5E-34 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 PANTHER PTHR11575 1 553 6.5E-234 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 PRINTS PR01607 Apyrase family signature 36 54 6.5E-52 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 PRINTS PR01607 Apyrase family signature 420 443 6.5E-52 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 PRINTS PR01607 Apyrase family signature 487 506 6.5E-52 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 PRINTS PR01607 Apyrase family signature 287 307 6.5E-52 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 PRINTS PR01607 Apyrase family signature 242 265 6.5E-52 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 PRINTS PR01607 Apyrase family signature 211 228 6.5E-52 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 Gene3D G3DSA:3.60.21.10 32 364 2.2E-98 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 SUPERFAMILY SSF56300 32 364 7.39E-95 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 Gene3D G3DSA:3.90.780.10 367 542 8.2E-53 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP0748 1cdd37a62b1414e2ab01b6d41e3a5d43 560 PANTHER PTHR11575:SF27 1 553 6.5E-234 T 22-04-2016 VP3080 f056626ffb1830769b322439cbd08873 631 SUPERFAMILY SSF51905 97 261 2.32E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP3080 f056626ffb1830769b322439cbd08873 631 SUPERFAMILY SSF51905 6 66 2.32E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP3080 f056626ffb1830769b322439cbd08873 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.6E-294 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VP3080 f056626ffb1830769b322439cbd08873 631 SMART SM01228 546 617 2.5E-42 T 22-04-2016 VP3080 f056626ffb1830769b322439cbd08873 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site VP3080 f056626ffb1830769b322439cbd08873 631 Gene3D G3DSA:3.50.50.60 7 234 5.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP3080 f056626ffb1830769b322439cbd08873 631 Pfam PF13932 GidA associated domain 403 616 1.1E-71 T 22-04-2016 IPR026904 GidA associated domain 3 VP3080 f056626ffb1830769b322439cbd08873 631 Pfam PF01134 Glucose inhibited division protein A 8 399 6.1E-170 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 VP3080 f056626ffb1830769b322439cbd08873 631 PANTHER PTHR11806:SF0 1 631 0.0 T 22-04-2016 VP3080 f056626ffb1830769b322439cbd08873 631 PANTHER PTHR11806 1 631 0.0 T 22-04-2016 VP3080 f056626ffb1830769b322439cbd08873 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site VP3080 f056626ffb1830769b322439cbd08873 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.732 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VP0297 1e9295c067c8827c9b1392b839de8ffc 194 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 1 182 3.0E-82 T 22-04-2016 IPR021254 Protein of unknown function DUF2806 VP0297 1e9295c067c8827c9b1392b839de8ffc 194 Pfam PF10987 Protein of unknown function (DUF2806) 1 172 1.5E-64 T 22-04-2016 IPR021254 Protein of unknown function DUF2806 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 PIRSF PIRSF006621 1 323 4.2E-76 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 3.8E-162 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 PANTHER PTHR11082:SF29 6 324 9.2E-164 T 22-04-2016 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.676 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 PANTHER PTHR11082 6 324 9.2E-164 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 Gene3D G3DSA:3.20.20.70 5 248 1.4E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 315 9.7E-96 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2727 4e6325121aa3716c2bab4f9ec5b8618e 326 SUPERFAMILY SSF51395 6 319 1.99E-75 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PANTHER PTHR22912:SF93 1 461 3.7E-279 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 SUPERFAMILY SSF51905 5 319 4.94E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 2.0E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 Gene3D G3DSA:3.50.50.60 271 339 1.2E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 Gene3D G3DSA:3.50.50.60 6 141 1.2E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PANTHER PTHR22912 1 461 3.7E-279 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.724 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.6E-52 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 SUPERFAMILY SSF55424 345 463 1.89E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 4.9E-28 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 4.9E-28 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 4.9E-28 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.9E-28 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 4.9E-28 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 PIRSF PIRSF000350 2 463 1.0E-69 T 22-04-2016 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 Gene3D G3DSA:3.50.50.60 142 270 4.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 Gene3D G3DSA:3.30.390.30 344 460 1.4E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VP2942 1ef09be69e9a62ebb7aa93af2fd409a4 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 2.5E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2237 56621eec9c20725334f08bef98541dc3 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 1.2E-55 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP2237 56621eec9c20725334f08bef98541dc3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 7.9E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP2237 56621eec9c20725334f08bef98541dc3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 7.9E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP2237 56621eec9c20725334f08bef98541dc3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 7.9E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP2237 56621eec9c20725334f08bef98541dc3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 7.9E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP2237 56621eec9c20725334f08bef98541dc3 260 PANTHER PTHR30065 1 257 7.7E-87 T 22-04-2016 VP2237 56621eec9c20725334f08bef98541dc3 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 4.3E-74 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VP2237 56621eec9c20725334f08bef98541dc3 260 PANTHER PTHR30065:SF1 1 257 7.7E-87 T 22-04-2016 VP1020 96ff865d191acccea8f09a54bfb750ef 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VP1020 96ff865d191acccea8f09a54bfb750ef 426 Gene3D G3DSA:3.65.10.10 22 238 1.1E-69 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VP1020 96ff865d191acccea8f09a54bfb750ef 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 2.3E-142 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VP1020 96ff865d191acccea8f09a54bfb750ef 426 PIRSF PIRSF000505 1 426 4.2E-154 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VP1020 96ff865d191acccea8f09a54bfb750ef 426 SUPERFAMILY SSF55205 1 424 3.14E-144 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VP1020 96ff865d191acccea8f09a54bfb750ef 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VP1020 96ff865d191acccea8f09a54bfb750ef 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.387 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VP1020 96ff865d191acccea8f09a54bfb750ef 426 PANTHER PTHR21090 1 425 2.0E-212 T 22-04-2016 VP1020 96ff865d191acccea8f09a54bfb750ef 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 6.3E-156 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VP1020 96ff865d191acccea8f09a54bfb750ef 426 Gene3D G3DSA:3.65.10.10 239 424 3.7E-74 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VP1989 01420862e32dcbde2375ddff08850e0c 354 SUPERFAMILY SSF111369 178 253 1.1E-5 T 22-04-2016 VP1989 01420862e32dcbde2375ddff08850e0c 354 Pfam PF13533 Biotin-lipoyl like 44 88 8.7E-17 T 22-04-2016 VP1989 01420862e32dcbde2375ddff08850e0c 354 Pfam PF13437 HlyD family secretion protein 200 268 2.5E-6 T 22-04-2016 VP1989 01420862e32dcbde2375ddff08850e0c 354 PANTHER PTHR30367 1 354 8.6E-71 T 22-04-2016 VP1989 01420862e32dcbde2375ddff08850e0c 354 PANTHER PTHR30367:SF6 1 354 8.6E-71 T 22-04-2016 VP1989 01420862e32dcbde2375ddff08850e0c 354 Gene3D G3DSA:2.40.50.100 44 77 1.5E-19 T 22-04-2016 VP1989 01420862e32dcbde2375ddff08850e0c 354 Gene3D G3DSA:2.40.50.100 197 231 1.5E-19 T 22-04-2016 VP1989 01420862e32dcbde2375ddff08850e0c 354 SUPERFAMILY SSF111369 38 96 1.06E-9 T 22-04-2016 VP1989 01420862e32dcbde2375ddff08850e0c 354 SUPERFAMILY SSF111369 109 166 4.45E-6 T 22-04-2016 VP0134 ed8c26015f893956c3f8e624bd8137e7 500 Gene3D G3DSA:3.40.50.300 228 498 9.6E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0134 ed8c26015f893956c3f8e624bd8137e7 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 1.7E-226 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VP0134 ed8c26015f893956c3f8e624bd8137e7 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP0134 ed8c26015f893956c3f8e624bd8137e7 500 SUPERFAMILY SSF160246 12 78 2.88E-17 T 22-04-2016 VP0134 ed8c26015f893956c3f8e624bd8137e7 500 SUPERFAMILY SSF52540 107 497 1.05E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0134 ed8c26015f893956c3f8e624bd8137e7 500 PANTHER PTHR30258 3 499 0.0 T 22-04-2016 VP0134 ed8c26015f893956c3f8e624bd8137e7 500 SMART SM00382 253 376 5.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0134 ed8c26015f893956c3f8e624bd8137e7 500 PANTHER PTHR30258:SF9 3 499 0.0 T 22-04-2016 VP0134 ed8c26015f893956c3f8e624bd8137e7 500 Gene3D G3DSA:3.30.450.90 92 225 8.3E-56 T 22-04-2016 VP0134 ed8c26015f893956c3f8e624bd8137e7 500 Pfam PF00437 Type II/IV secretion system protein 127 392 4.9E-88 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 SUPERFAMILY SSF63418 1 96 2.09E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 Gene3D G3DSA:3.90.190.20 316 452 1.4E-39 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 SUPERFAMILY SSF53244 316 450 9.46E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 SUPERFAMILY SSF53623 100 313 1.96E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 PANTHER PTHR23135 12 452 7.5E-151 T 22-04-2016 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.635 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 7.6E-141 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 2.4E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 Pfam PF08245 Mur ligase middle domain 105 295 6.8E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 Gene3D G3DSA:3.40.1190.10 82 311 2.0E-69 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 Gene3D G3DSA:3.40.1390.10 1 80 3.9E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 Pfam PF01225 Mur ligase family, catalytic domain 24 91 1.0E-7 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VP0456 269f85b48baa3f9887be0d99f9a5bf33 454 PANTHER PTHR23135:SF3 12 452 7.5E-151 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2035 55bbfa092984d3432a892e8038870f73 467 Pfam PF00817 impB/mucB/samB family 23 146 2.0E-9 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2035 55bbfa092984d3432a892e8038870f73 467 PANTHER PTHR35369:SF2 1 467 3.2E-56 T 22-04-2016 VP2035 55bbfa092984d3432a892e8038870f73 467 SUPERFAMILY SSF56672 11 225 3.67E-32 T 22-04-2016 VP2035 55bbfa092984d3432a892e8038870f73 467 PANTHER PTHR35369 1 467 3.2E-56 T 22-04-2016 VP0545 8f669c319db709ac01ccad2d4e6286fb 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VP0545 8f669c319db709ac01ccad2d4e6286fb 327 PANTHER PTHR30480 4 287 2.3E-121 T 22-04-2016 VP0545 8f669c319db709ac01ccad2d4e6286fb 327 PANTHER PTHR30480:SF7 4 287 2.3E-121 T 22-04-2016 VP0545 8f669c319db709ac01ccad2d4e6286fb 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 286 3.6E-84 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VP0545 8f669c319db709ac01ccad2d4e6286fb 327 SUPERFAMILY SSF51445 2 286 8.53E-86 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP0545 8f669c319db709ac01ccad2d4e6286fb 327 Gene3D G3DSA:3.20.20.300 3 284 1.2E-90 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VP0545 8f669c319db709ac01ccad2d4e6286fb 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 44.748 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 VP1180 8851305ac7e84c9263adb3718f6ea36f 283 SUPERFAMILY SSF158855 30 280 5.1E-61 T 22-04-2016 VP1180 8851305ac7e84c9263adb3718f6ea36f 283 Pfam PF03280 Proteobacterial lipase chaperone protein 85 269 2.8E-40 T 22-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VP1883 a174ff08d1f860abd8f82ea3367899d7 137 Gene3D G3DSA:3.30.479.10 21 137 8.2E-41 T 22-04-2016 VP1883 a174ff08d1f860abd8f82ea3367899d7 137 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 21 137 9.1E-36 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VP1883 a174ff08d1f860abd8f82ea3367899d7 137 SUPERFAMILY SSF55620 20 135 1.0E-40 T 22-04-2016 VP1883 a174ff08d1f860abd8f82ea3367899d7 137 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 21 113 6.0E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VP1883 a174ff08d1f860abd8f82ea3367899d7 137 PANTHER PTHR12589 10 137 1.3E-52 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VP1883 a174ff08d1f860abd8f82ea3367899d7 137 PIRSF PIRSF006113 17 137 4.8E-53 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 PANTHER PTHR30118 14 319 1.8E-152 T 22-04-2016 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 189 281 1.1E-15 T 22-04-2016 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 SUPERFAMILY SSF53850 106 309 2.53E-39 T 22-04-2016 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 Pfam PF03466 LysR substrate binding domain 121 307 2.3E-23 T 22-04-2016 IPR005119 LysR, substrate-binding VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 PANTHER PTHR30118:SF6 14 319 1.8E-152 T 22-04-2016 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 287 315 6.9E-25 T 22-04-2016 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 106 188 6.9E-25 T 22-04-2016 VP0350 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:1.10.10.10 17 101 4.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPA1156 4a228828dd3c7b90c3cdd81825ae738e 250 Pfam PF02065 Melibiase 5 157 6.8E-16 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VPA1156 4a228828dd3c7b90c3cdd81825ae738e 250 SUPERFAMILY SSF51445 1 249 7.19E-67 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPA1156 4a228828dd3c7b90c3cdd81825ae738e 250 PANTHER PTHR22762 2 156 3.0E-17 T 22-04-2016 VPA1156 4a228828dd3c7b90c3cdd81825ae738e 250 Gene3D G3DSA:3.20.20.70 1 247 1.6E-43 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2829 03581bd37b1030b49d7bc02cef145938 510 PIRSF PIRSF001492 1 510 9.5E-202 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2829 03581bd37b1030b49d7bc02cef145938 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.393 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2829 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.1450.10 79 308 2.7E-94 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2829 03581bd37b1030b49d7bc02cef145938 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.4E-80 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2829 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF64158 78 308 1.44E-80 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2829 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF53649 313 509 8.64E-76 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP2829 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF53649 4 78 8.64E-76 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP2829 03581bd37b1030b49d7bc02cef145938 510 PANTHER PTHR31637:SF0 4 510 6.2E-282 T 22-04-2016 VP2829 03581bd37b1030b49d7bc02cef145938 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.3E-227 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VP2829 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.720.10 4 78 9.7E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP2829 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.720.10 313 509 9.7E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP2829 03581bd37b1030b49d7bc02cef145938 510 PANTHER PTHR31637 4 510 6.2E-282 T 22-04-2016 VP2829 03581bd37b1030b49d7bc02cef145938 510 Pfam PF01676 Metalloenzyme superfamily 5 498 8.6E-81 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VP1853 1ab97e74cd4736ed1da18e4d7db1be97 275 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 140 261 1.9E-40 T 22-04-2016 IPR012654 Conserved hypothetical protein CHP02391 VP1853 1ab97e74cd4736ed1da18e4d7db1be97 275 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 142 266 2.2E-42 T 22-04-2016 IPR012654 Conserved hypothetical protein CHP02391 VP1736 25fa0a6496412f9a0bbbc0b8c516db1c 649 Gene3D G3DSA:3.40.720.10 285 571 1.7E-45 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP1736 25fa0a6496412f9a0bbbc0b8c516db1c 649 PIRSF PIRSF005091 13 648 5.0E-100 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 VP1736 25fa0a6496412f9a0bbbc0b8c516db1c 649 PANTHER PTHR10342:SF236 258 585 4.5E-88 T 22-04-2016 VP1736 25fa0a6496412f9a0bbbc0b8c516db1c 649 PANTHER PTHR10342 258 585 4.5E-88 T 22-04-2016 VP1736 25fa0a6496412f9a0bbbc0b8c516db1c 649 Pfam PF00884 Sulfatase 285 555 5.6E-51 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VP1736 25fa0a6496412f9a0bbbc0b8c516db1c 649 SUPERFAMILY SSF53649 283 595 4.71E-70 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 Gene3D G3DSA:3.40.50.1220 229 299 3.6E-4 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 396 1.9E-38 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 PIRSF PIRSF004983 3 571 1.0E-189 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 SUPERFAMILY SSF52467 221 359 1.13E-6 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 32.292 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 4.0E-131 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 Gene3D G3DSA:3.40.50.970 11 180 1.0E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 PANTHER PTHR18968:SF114 4 563 5.3E-176 T 22-04-2016 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 Gene3D G3DSA:3.40.50.970 378 559 7.3E-21 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 SUPERFAMILY SSF52518 392 562 6.7E-25 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 141 6.3E-31 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 PANTHER PTHR18968 4 563 5.3E-176 T 22-04-2016 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 422 549 4.5E-7 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VP0929 a90639cd570b8e7eb23fb545d21a7e29 571 SUPERFAMILY SSF52518 9 175 2.78E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2019 fd1e3c0db584348a46c7167ebc0273d1 192 Gene3D G3DSA:3.40.50.10610 16 190 4.2E-19 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component VP2019 fd1e3c0db584348a46c7167ebc0273d1 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 189 2.1E-38 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component VP2019 fd1e3c0db584348a46c7167ebc0273d1 192 SUPERFAMILY SSF159594 29 192 5.75E-29 T 22-04-2016 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 PANTHER PTHR11735:SF6 1 334 1.1E-167 T 22-04-2016 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.3E-133 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 SUPERFAMILY SSF53067 101 309 3.89E-43 T 22-04-2016 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 SUPERFAMILY SSF53067 3 123 6.04E-31 T 22-04-2016 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 PANTHER PTHR11735 1 334 1.1E-167 T 22-04-2016 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 Pfam PF00814 Glycoprotease family 24 307 3.5E-103 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 Gene3D G3DSA:3.30.420.40 1 159 2.4E-47 T 22-04-2016 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 2.5E-123 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.396 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0408 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP2536 a518815ee07b586a806be0127c771a50 426 Pfam PF00571 CBS domain 278 325 2.5E-5 T 22-04-2016 IPR000644 CBS domain VP2536 a518815ee07b586a806be0127c771a50 426 PANTHER PTHR22777 2 418 3.8E-151 T 22-04-2016 VP2536 a518815ee07b586a806be0127c771a50 426 Pfam PF01595 Domain of unknown function DUF21 13 181 3.1E-49 T 22-04-2016 IPR002550 Domain of unknown function DUF21 VP2536 a518815ee07b586a806be0127c771a50 426 Gene3D G3DSA:3.10.580.10 192 318 3.4E-13 T 22-04-2016 VP2536 a518815ee07b586a806be0127c771a50 426 PANTHER PTHR22777:SF3 2 418 3.8E-151 T 22-04-2016 VP2536 a518815ee07b586a806be0127c771a50 426 Gene3D G3DSA:3.30.465.10 319 418 6.7E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VP2536 a518815ee07b586a806be0127c771a50 426 Pfam PF03471 Transporter associated domain 344 418 1.5E-17 T 22-04-2016 IPR005170 Transporter-associated domain VP2536 a518815ee07b586a806be0127c771a50 426 SMART SM01091 342 420 2.2E-24 T 22-04-2016 IPR005170 Transporter-associated domain VP2536 a518815ee07b586a806be0127c771a50 426 SUPERFAMILY SSF56176 340 423 1.83E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VP2536 a518815ee07b586a806be0127c771a50 426 SUPERFAMILY SSF54631 192 329 3.92E-24 T 22-04-2016 VP2219 4e264910174ce4a4f796911571b627c4 161 Gene3D G3DSA:2.40.50.140 26 130 3.2E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2219 4e264910174ce4a4f796911571b627c4 161 PANTHER PTHR34128:SF1 1 161 6.4E-77 T 22-04-2016 VP2219 4e264910174ce4a4f796911571b627c4 161 PANTHER PTHR34128 1 161 6.4E-77 T 22-04-2016 VP2219 4e264910174ce4a4f796911571b627c4 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.123 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VP2219 4e264910174ce4a4f796911571b627c4 161 Pfam PF03100 CcmE 4 136 2.5E-44 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VP2219 4e264910174ce4a4f796911571b627c4 161 SUPERFAMILY SSF82093 30 142 4.32E-38 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VP0193 cdc24422911aab84e35de36cda504013 255 SUPERFAMILY SSF53448 3 144 4.82E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0193 cdc24422911aab84e35de36cda504013 255 PANTHER PTHR10859 2 108 6.0E-28 T 22-04-2016 VP0193 cdc24422911aab84e35de36cda504013 255 Gene3D G3DSA:3.90.550.10 3 124 2.8E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0193 cdc24422911aab84e35de36cda504013 255 Pfam PF00535 Glycosyl transferase family 2 8 114 1.2E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VP2867 aa9a48bf2b6295e89404d5a601a96779 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 51.298 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 SUPERFAMILY SSF56176 499 570 1.83E-7 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 Gene3D G3DSA:3.30.70.1450 420 483 2.2E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 SMART SM01091 493 572 3.2E-8 T 22-04-2016 IPR005170 Transporter-associated domain VP2867 aa9a48bf2b6295e89404d5a601a96779 581 PANTHER PTHR32507:SF7 1 575 2.9E-286 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 4.2E-57 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 PANTHER PTHR32507 1 575 2.9E-286 T 22-04-2016 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 SUPERFAMILY SSF116726 413 481 6.54E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 Gene3D G3DSA:3.30.465.10 500 569 7.2E-8 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 Pfam PF02080 TrkA-C domain 417 484 4.1E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VP2867 aa9a48bf2b6295e89404d5a601a96779 581 Pfam PF03471 Transporter associated domain 497 570 1.3E-6 T 22-04-2016 IPR005170 Transporter-associated domain VP0073 95917eb055128cce173d5758fdea8f2f 259 SUPERFAMILY SSF53335 4 255 2.11E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0073 95917eb055128cce173d5758fdea8f2f 259 PANTHER PTHR36112 16 259 3.2E-137 T 22-04-2016 VP0073 95917eb055128cce173d5758fdea8f2f 259 PANTHER PTHR36112:SF1 16 259 3.2E-137 T 22-04-2016 VP0073 95917eb055128cce173d5758fdea8f2f 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 5.6E-107 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VP0073 95917eb055128cce173d5758fdea8f2f 259 Gene3D G3DSA:3.40.1630.10 2 56 4.6E-27 T 22-04-2016 VP0073 95917eb055128cce173d5758fdea8f2f 259 Gene3D G3DSA:3.40.50.150 57 256 8.2E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0073 95917eb055128cce173d5758fdea8f2f 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 39.009 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VP0802 bd2b34b2179936c8f3c9409331d4d0a5 469 Gene3D G3DSA:2.40.160.10 70 468 4.4E-43 T 22-04-2016 IPR023614 Porin domain VP0826 0adfbbc9350e01b608059402d0169c86 554 Gene3D G3DSA:3.40.50.620 196 510 2.7E-115 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0826 0adfbbc9350e01b608059402d0169c86 554 Gene3D G3DSA:3.60.20.10 2 188 3.1E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0826 0adfbbc9350e01b608059402d0169c86 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 1.2E-115 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 VP0826 0adfbbc9350e01b608059402d0169c86 554 PANTHER PTHR11772 2 538 5.8E-294 T 22-04-2016 VP0826 0adfbbc9350e01b608059402d0169c86 554 Pfam PF00733 Asparagine synthase 211 366 4.7E-55 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VP0826 0adfbbc9350e01b608059402d0169c86 554 Pfam PF00733 Asparagine synthase 367 511 5.5E-41 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VP0826 0adfbbc9350e01b608059402d0169c86 554 PANTHER PTHR11772:SF11 2 538 5.8E-294 T 22-04-2016 VP0826 0adfbbc9350e01b608059402d0169c86 554 SUPERFAMILY SSF52402 208 483 1.86E-74 T 22-04-2016 VP0826 0adfbbc9350e01b608059402d0169c86 554 SUPERFAMILY SSF56235 1 196 1.8E-56 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0826 0adfbbc9350e01b608059402d0169c86 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 6.7E-40 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VP2244 f453a6c64a21a22d1610450a0e352c7c 643 PANTHER PTHR37533:SF2 202 643 3.1E-39 T 22-04-2016 VP2244 f453a6c64a21a22d1610450a0e352c7c 643 Pfam PF02120 Flagellar hook-length control protein FliK 513 596 5.3E-25 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal VP2244 f453a6c64a21a22d1610450a0e352c7c 643 PANTHER PTHR37533 202 643 3.1E-39 T 22-04-2016 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:3.40.50.2300 58 167 2.8E-34 T 22-04-2016 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:3.40.50.2300 168 330 1.7E-63 T 22-04-2016 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:1.10.260.40 1 57 3.8E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 PANTHER PTHR30146 1 335 5.6E-148 T 22-04-2016 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 PANTHER PTHR30146:SF4 1 335 5.6E-148 T 22-04-2016 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.2E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.0E-40 T 22-04-2016 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 SMART SM00354 1 71 2.4E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 SUPERFAMILY SSF53822 60 332 4.71E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP0252 b6c4100ac8e9f651a3d01dd11455db2d 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0035 d318d36fde22e074af5a5555cec8155a 494 Gene3D G3DSA:3.40.50.720 1 201 4.1E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0035 d318d36fde22e074af5a5555cec8155a 494 SUPERFAMILY SSF51735 31 209 1.82E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0035 d318d36fde22e074af5a5555cec8155a 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.8E-125 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0035 d318d36fde22e074af5a5555cec8155a 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.3E-59 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0035 d318d36fde22e074af5a5555cec8155a 494 SUPERFAMILY SSF48179 210 341 5.95E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP0035 d318d36fde22e074af5a5555cec8155a 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.7E-26 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0035 d318d36fde22e074af5a5555cec8155a 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.2E-16 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0035 d318d36fde22e074af5a5555cec8155a 494 SUPERFAMILY SSF48179 348 487 1.87E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP0035 d318d36fde22e074af5a5555cec8155a 494 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 488 36.888 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0035 d318d36fde22e074af5a5555cec8155a 494 PANTHER PTHR21371 1 492 1.9E-202 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0035 d318d36fde22e074af5a5555cec8155a 494 Gene3D G3DSA:1.10.1040.10 332 484 2.4E-14 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP0033 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 PANTHER PTHR38030:SF2 1 175 1.7E-86 T 22-04-2016 VP0033 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 Pfam PF12724 Flavodoxin domain 5 153 1.4E-51 T 22-04-2016 IPR026816 Flavodoxin domain VP0033 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 PANTHER PTHR38030 1 175 1.7E-86 T 22-04-2016 VP0033 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 SUPERFAMILY SSF52218 3 158 4.03E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain VP0033 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 Gene3D G3DSA:3.40.50.360 3 72 1.2E-22 T 22-04-2016 IPR029039 Flavoprotein-like domain VP0033 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 Gene3D G3DSA:3.40.50.360 106 175 1.2E-22 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2202 999e71a16902dc886db2a004656314bd 361 Pfam PF01264 Chorismate synthase 10 345 9.8E-145 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 Gene3D G3DSA:3.60.150.10 9 352 1.7E-163 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 SUPERFAMILY SSF103263 4 354 2.09E-150 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.3E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 PANTHER PTHR21085 2 352 8.4E-224 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 PIRSF PIRSF001456 3 360 7.8E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP2202 999e71a16902dc886db2a004656314bd 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.782 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VP0089 21755237612729cdb7d3b1e3f341b635 170 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 45 154 1.2E-8 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III VPA0520 667bddceaef01efc0568299a86ee0d7a 397 PANTHER PTHR30255 2 397 7.4E-152 T 22-04-2016 VPA0520 667bddceaef01efc0568299a86ee0d7a 397 PANTHER PTHR30255:SF2 2 397 7.4E-152 T 22-04-2016 VPA0520 667bddceaef01efc0568299a86ee0d7a 397 Pfam PF02272 DHHA1 domain 229 298 1.1E-16 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VPA0520 667bddceaef01efc0568299a86ee0d7a 397 SUPERFAMILY SSF64182 1 313 8.02E-83 T 22-04-2016 VP2214 9fe431183de97427fed95caecf16a72a 258 PRINTS PR01805 VacJ lipoprotein signature 61 77 4.4E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VP2214 9fe431183de97427fed95caecf16a72a 258 PRINTS PR01805 VacJ lipoprotein signature 112 129 4.4E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VP2214 9fe431183de97427fed95caecf16a72a 258 PRINTS PR01805 VacJ lipoprotein signature 43 56 4.4E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VP2214 9fe431183de97427fed95caecf16a72a 258 PRINTS PR01805 VacJ lipoprotein signature 149 166 4.4E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VP2214 9fe431183de97427fed95caecf16a72a 258 PANTHER PTHR30035 22 257 1.1E-96 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VP2214 9fe431183de97427fed95caecf16a72a 258 Pfam PF04333 MlaA lipoprotein 42 233 1.3E-62 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VP2214 9fe431183de97427fed95caecf16a72a 258 PANTHER PTHR30035:SF3 22 257 1.1E-96 T 22-04-2016 VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 Pfam PF00557 Metallopeptidase family M24 309 523 6.2E-43 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 2.2E-23 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 133 2.8E-19 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 PANTHER PTHR10804:SF105 8 180 1.1E-234 T 22-04-2016 VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 PANTHER PTHR10804:SF105 282 591 1.1E-234 T 22-04-2016 VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 Gene3D G3DSA:3.40.350.10 7 129 9.0E-22 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 Gene3D G3DSA:3.90.230.10 301 559 3.3E-59 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 SUPERFAMILY SSF53092 7 130 3.49E-20 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 SUPERFAMILY SSF55920 303 559 5.5E-56 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 6.6E-35 T 22-04-2016 VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 PANTHER PTHR10804 8 180 1.1E-234 T 22-04-2016 VP3021 c36b56f4f25a693f1de4ce4d7193567f 596 PANTHER PTHR10804 282 591 1.1E-234 T 22-04-2016 VP1709 d103efde148e275930bfd6453fd44a5e 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 1.4E-61 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VP1709 d103efde148e275930bfd6453fd44a5e 238 Gene3D G3DSA:3.40.50.1360 3 237 6.3E-72 T 22-04-2016 VP1709 d103efde148e275930bfd6453fd44a5e 238 PANTHER PTHR11054 5 237 3.4E-73 T 22-04-2016 VP1709 d103efde148e275930bfd6453fd44a5e 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 6.3E-53 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 VP1709 d103efde148e275930bfd6453fd44a5e 238 SUPERFAMILY SSF100950 3 237 1.57E-60 T 22-04-2016 VP1587 d1fdb7f19e61b1b08237e4d088df4dfd 124 Gene3D G3DSA:3.30.1150.10 36 102 5.6E-6 T 22-04-2016 VP1464 223e6cb14b57149a4244f454efd9fa6c 432 Pfam PF04932 O-Antigen ligase 217 355 1.8E-19 T 22-04-2016 IPR007016 O-antigen ligase-related VP0191 c3010deb6fc5a3ba846e6c0e5ab3d494 311 PANTHER PTHR12203 116 305 3.5E-27 T 22-04-2016 VP0191 c3010deb6fc5a3ba846e6c0e5ab3d494 311 Pfam PF05686 Glycosyl transferase family 90 140 286 2.6E-14 T 22-04-2016 IPR006598 Lipopolysaccharide-modifying protein VP0191 c3010deb6fc5a3ba846e6c0e5ab3d494 311 SMART SM00672 93 302 1.9E-4 T 22-04-2016 IPR006598 Lipopolysaccharide-modifying protein VP2951 c4f73f3ff1340df866c6f85c28d867cf 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 3.3E-116 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VP2951 c4f73f3ff1340df866c6f85c28d867cf 280 PANTHER PTHR22936 1 271 1.0E-83 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VP2951 c4f73f3ff1340df866c6f85c28d867cf 280 Pfam PF01694 Rhomboid family 134 270 6.4E-31 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VP2951 c4f73f3ff1340df866c6f85c28d867cf 280 PANTHER PTHR22936:SF30 1 271 1.0E-83 T 22-04-2016 VP2951 c4f73f3ff1340df866c6f85c28d867cf 280 SUPERFAMILY SSF144091 96 271 4.45E-40 T 22-04-2016 VP2951 c4f73f3ff1340df866c6f85c28d867cf 280 Gene3D G3DSA:1.20.1540.10 97 268 7.1E-31 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VP2951 c4f73f3ff1340df866c6f85c28d867cf 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 1.8E-34 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VP1018 bc76f931ef6b5e084c2cd8adb075bed3 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 216 3.4E-75 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VP1018 bc76f931ef6b5e084c2cd8adb075bed3 236 PANTHER PTHR30098 1 236 1.5E-77 T 22-04-2016 VP1018 bc76f931ef6b5e084c2cd8adb075bed3 236 SUPERFAMILY SSF55729 5 229 2.28E-87 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1018 bc76f931ef6b5e084c2cd8adb075bed3 236 PANTHER PTHR30098:SF2 1 236 1.5E-77 T 22-04-2016 VP1018 bc76f931ef6b5e084c2cd8adb075bed3 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 204 4.7E-69 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VP1018 bc76f931ef6b5e084c2cd8adb075bed3 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 91.703 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VP0306 471cf6880ade7921b90b7d3607a4207b 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 2.8E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VP0306 471cf6880ade7921b90b7d3607a4207b 212 Gene3D G3DSA:3.30.1060.10 4 197 1.2E-81 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VP0306 471cf6880ade7921b90b7d3607a4207b 212 PANTHER PTHR10173:SF36 1 201 1.5E-99 T 22-04-2016 VP0306 471cf6880ade7921b90b7d3607a4207b 212 PANTHER PTHR10173 1 201 1.5E-99 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VP0306 471cf6880ade7921b90b7d3607a4207b 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 5.9E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VP0306 471cf6880ade7921b90b7d3607a4207b 212 SUPERFAMILY SSF55068 3 207 3.4E-80 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VP0306 471cf6880ade7921b90b7d3607a4207b 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.266 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 PANTHER PTHR21299:SF1 1 294 8.8E-134 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 Gene3D G3DSA:3.40.50.620 1 176 3.1E-78 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.2E-99 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 63 8.9E-9 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 SUPERFAMILY SSF52374 1 280 5.91E-106 T 22-04-2016 VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.977 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 Gene3D G3DSA:3.30.1300.10 177 288 1.1E-26 T 22-04-2016 VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 4.2E-102 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VP2507 f2ae5af34d0be2bd1497b53ad57aadfa 301 PANTHER PTHR21299 1 294 8.8E-134 T 22-04-2016 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 SUPERFAMILY SSF51366 1 266 3.48E-92 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 PANTHER PTHR10314:SF4 1 51 1.3E-27 T 22-04-2016 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 PANTHER PTHR10314:SF4 74 154 1.3E-27 T 22-04-2016 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.312 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 Gene3D G3DSA:3.20.20.70 1 267 2.7E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.3E-103 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 PANTHER PTHR10314 1 51 1.3E-27 T 22-04-2016 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 PANTHER PTHR10314 74 154 1.3E-27 T 22-04-2016 VP1961 d3c546ff44bd8521898c9a664f1b5f43 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 9.9E-102 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VP2213 853ebb831ce1c61195b2f56bba5d8572 439 PANTHER PTHR35093 3 439 1.8E-149 T 22-04-2016 VP2213 853ebb831ce1c61195b2f56bba5d8572 439 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 439 1.2E-129 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VP2213 853ebb831ce1c61195b2f56bba5d8572 439 Gene3D G3DSA:2.40.160.60 26 439 4.4E-128 T 22-04-2016 VP2213 853ebb831ce1c61195b2f56bba5d8572 439 SUPERFAMILY SSF56935 26 439 6.1E-101 T 22-04-2016 VP2213 853ebb831ce1c61195b2f56bba5d8572 439 PANTHER PTHR35093:SF2 3 439 1.8E-149 T 22-04-2016 VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 418 4.6E-176 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 Pfam PF00202 Aminotransferase class-III 24 419 1.5E-128 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 Gene3D G3DSA:3.90.1150.10 2 58 2.8E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 Gene3D G3DSA:3.90.1150.10 319 420 2.8E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 PANTHER PTHR11986 4 423 1.4E-183 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 SUPERFAMILY SSF53383 16 419 1.73E-131 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 PANTHER PTHR11986:SF17 4 423 1.4E-183 T 22-04-2016 VP1771 8c5b816f2981611ddd2bda9d74700ef3 423 Gene3D G3DSA:3.40.640.10 59 317 5.3E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP3032 290ba65205f5630f582d603ebc1910f9 87 SUPERFAMILY SSF160272 1 86 1.7E-29 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VP3032 290ba65205f5630f582d603ebc1910f9 87 Gene3D G3DSA:3.30.160.140 1 86 3.7E-35 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VP3032 290ba65205f5630f582d603ebc1910f9 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 86 4.9E-27 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VP1343 05b2118714c98031a3dc3600fea00008 326 Pfam PF00005 ABC transporter 35 186 8.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1343 05b2118714c98031a3dc3600fea00008 326 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1343 05b2118714c98031a3dc3600fea00008 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.9E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP1343 05b2118714c98031a3dc3600fea00008 326 SMART SM00382 43 236 5.4E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1343 05b2118714c98031a3dc3600fea00008 326 SUPERFAMILY SSF52540 8 258 8.84E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1343 05b2118714c98031a3dc3600fea00008 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 1.2E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP1343 05b2118714c98031a3dc3600fea00008 326 Gene3D G3DSA:3.40.50.300 3 262 5.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1343 05b2118714c98031a3dc3600fea00008 326 PANTHER PTHR24220 9 322 1.3E-156 T 22-04-2016 VP1343 05b2118714c98031a3dc3600fea00008 326 PANTHER PTHR24220:SF544 9 322 1.3E-156 T 22-04-2016 VP0095 6f893c82d99df8de1eb984497c1bac53 259 PANTHER PTHR10108:SF864 13 259 3.2E-183 T 22-04-2016 VP0095 6f893c82d99df8de1eb984497c1bac53 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 258 3.3E-103 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VP0095 6f893c82d99df8de1eb984497c1bac53 259 SUPERFAMILY SSF53335 27 257 4.18E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0095 6f893c82d99df8de1eb984497c1bac53 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 7.7E-83 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VP0095 6f893c82d99df8de1eb984497c1bac53 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VP0095 6f893c82d99df8de1eb984497c1bac53 259 Gene3D G3DSA:3.40.50.150 32 255 4.4E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0095 6f893c82d99df8de1eb984497c1bac53 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.455 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VP0095 6f893c82d99df8de1eb984497c1bac53 259 PANTHER PTHR10108 13 259 3.2E-183 T 22-04-2016 VP0095 6f893c82d99df8de1eb984497c1bac53 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VP2541 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 PANTHER PTHR30353 20 152 3.2E-45 T 22-04-2016 IPR032818 DedA family VP2541 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 PANTHER PTHR30353:SF12 20 152 3.2E-45 T 22-04-2016 VP2541 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 136 0.007 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 VP2541 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 Pfam PF09335 SNARE associated Golgi protein 56 146 1.2E-9 T 22-04-2016 IPR032816 SNARE associated Golgi protein VP2881 64d6a6560ad16545fbd439dca3be873d 447 PANTHER PTHR18866 1 442 9.9E-304 T 22-04-2016 VP2881 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain VP2881 64d6a6560ad16545fbd439dca3be873d 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP2881 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.40.50.20 1 129 9.9E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP2881 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF52440 1 113 4.6E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP2881 64d6a6560ad16545fbd439dca3be873d 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP2881 64d6a6560ad16545fbd439dca3be873d 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.6E-243 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VP2881 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 5.9E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal VP2881 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF51246 331 444 1.36E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif VP2881 64d6a6560ad16545fbd439dca3be873d 447 SMART SM00878 336 441 1.3E-64 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal VP2881 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF56059 83 346 2.12E-69 T 22-04-2016 VP2881 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.4E-83 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VP2881 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.30.1490.20 130 203 2.3E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP2881 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.30.470.20 204 444 5.5E-102 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP1000 d926059c87db92af22a1db4ab582fe68 246 PANTHER PTHR30133:SF3 3 246 1.1E-164 T 22-04-2016 VP1000 d926059c87db92af22a1db4ab582fe68 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 241 4.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1000 d926059c87db92af22a1db4ab582fe68 246 Gene3D G3DSA:1.10.3720.10 110 241 5.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1000 d926059c87db92af22a1db4ab582fe68 246 Gene3D G3DSA:1.10.3720.10 8 78 5.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1000 d926059c87db92af22a1db4ab582fe68 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.6E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VP1000 d926059c87db92af22a1db4ab582fe68 246 SUPERFAMILY SSF161098 110 233 4.06E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1000 d926059c87db92af22a1db4ab582fe68 246 SUPERFAMILY SSF161098 11 78 4.06E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1000 d926059c87db92af22a1db4ab582fe68 246 PANTHER PTHR30133 3 246 1.1E-164 T 22-04-2016 VP2913 614920a95c3bed3315f8ddaa978eaa81 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 4.3E-78 T 22-04-2016 IPR007338 Protein of unknown function DUF416 VP2913 614920a95c3bed3315f8ddaa978eaa81 195 Gene3D G3DSA:1.20.1590.10 1 195 6.7E-86 T 22-04-2016 IPR023381 YP001051499.1-like domain VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.1E-45 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 Gene3D G3DSA:1.20.120.220 94 267 4.9E-60 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 PANTHER PTHR11410:SF7 32 119 6.4E-102 T 22-04-2016 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 PANTHER PTHR11410:SF7 135 270 6.4E-102 T 22-04-2016 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 PANTHER PTHR11410 32 119 6.4E-102 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 PANTHER PTHR11410 135 270 6.4E-102 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 Pfam PF00119 ATP synthase A chain 44 262 3.3E-58 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP3075 db2470a72f9ae4c0f613fc2abc1c8de6 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.223 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 9.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 9.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 9.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.6E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 PANTHER PTHR33705:SF1 1 84 4.3E-36 T 22-04-2016 VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 6.9E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 SUPERFAMILY SSF55594 1 82 1.96E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 Gene3D G3DSA:3.30.1340.10 1 83 1.5E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VP0795 0f1dc1b3fb5c270b4595c424437b7b6b 85 PANTHER PTHR33705 1 84 4.3E-36 T 22-04-2016 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.2E-275 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 SMART SM00955 267 595 1.6E-186 T 22-04-2016 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 SMART SM00357 90 152 3.6E-14 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 4.9E-257 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 PANTHER PTHR23355:SF9 5 815 0.0 T 22-04-2016 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 SUPERFAMILY SSF50249 71 154 1.46E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2807 bc47fed6637ead824a5e1af81e8bd806 835 SUPERFAMILY SSF50249 145 244 2.1E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2807 bc47fed6637ead824a5e1af81e8bd806 835 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 6.7E-12 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain VP2807 bc47fed6637ead824a5e1af81e8bd806 835 Pfam PF08206 Ribonuclease B OB domain 91 151 5.2E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain VP2807 bc47fed6637ead824a5e1af81e8bd806 835 Pfam PF00575 S1 RNA binding domain 650 731 1.3E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 Gene3D G3DSA:2.40.50.140 652 736 2.3E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2807 bc47fed6637ead824a5e1af81e8bd806 835 PANTHER PTHR23355 5 815 0.0 T 22-04-2016 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 Pfam PF00773 RNB domain 267 594 8.6E-109 T 22-04-2016 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 SMART SM00316 650 733 6.9E-15 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site VP2807 bc47fed6637ead824a5e1af81e8bd806 835 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.39 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VP2807 bc47fed6637ead824a5e1af81e8bd806 835 SUPERFAMILY SSF50249 651 742 2.31E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2807 bc47fed6637ead824a5e1af81e8bd806 835 SUPERFAMILY SSF50249 227 650 3.08E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0610 84f5edd39db94c9da79a1cc0c31fb4b8 204 PIRSF PIRSF006170 1 204 1.3E-53 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 VP0610 84f5edd39db94c9da79a1cc0c31fb4b8 204 Gene3D G3DSA:1.25.40.10 52 188 2.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0610 84f5edd39db94c9da79a1cc0c31fb4b8 204 SUPERFAMILY SSF48452 89 188 3.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0610 84f5edd39db94c9da79a1cc0c31fb4b8 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.7E-55 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain VP0610 84f5edd39db94c9da79a1cc0c31fb4b8 204 PANTHER PTHR38035 2 204 8.6E-74 T 22-04-2016 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 PANTHER PTHR11964 1 376 1.5E-281 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.0E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.186 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 133 233 5.8E-43 T 22-04-2016 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 2.2E-197 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 PIRSF PIRSF000497 1 381 8.0E-175 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 233 382 5.89E-71 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 111 232 1.49E-51 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 5.5E-69 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 244 381 3.1E-70 T 22-04-2016 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 11 132 8.6E-50 T 22-04-2016 VP2606 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.7E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPA0456 d902a02bb15cc9e4042308fb88bb71d6 296 Gene3D G3DSA:3.40.50.2300 230 293 9.9E-38 T 22-04-2016 VPA0456 d902a02bb15cc9e4042308fb88bb71d6 296 Gene3D G3DSA:3.40.50.2300 3 65 9.9E-38 T 22-04-2016 VPA0456 d902a02bb15cc9e4042308fb88bb71d6 296 Pfam PF04348 LppC putative lipoprotein 2 296 1.8E-87 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VPA0456 d902a02bb15cc9e4042308fb88bb71d6 296 PANTHER PTHR38038:SF1 2 296 3.1E-92 T 22-04-2016 VPA0456 d902a02bb15cc9e4042308fb88bb71d6 296 Gene3D G3DSA:3.40.50.2300 66 229 1.5E-48 T 22-04-2016 VPA0456 d902a02bb15cc9e4042308fb88bb71d6 296 SUPERFAMILY SSF53822 153 296 3.53E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPA0456 d902a02bb15cc9e4042308fb88bb71d6 296 SUPERFAMILY SSF53822 6 125 3.53E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPA0456 d902a02bb15cc9e4042308fb88bb71d6 296 PANTHER PTHR38038 2 296 3.1E-92 T 22-04-2016 VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 Gene3D G3DSA:3.40.47.10 2 260 1.0E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 SMART SM00825 Beta-ketoacyl synthase 6 416 3.5E-16 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.2E-64 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 SUPERFAMILY SSF53901 3 252 7.68E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 8.8E-193 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 5.9E-36 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 PIRSF PIRSF000447 1 416 1.5E-203 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 SUPERFAMILY SSF53901 215 414 5.76E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 Gene3D G3DSA:3.40.47.10 263 414 3.4E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2052 72d960ee038a1e4aa66dd3e714ce6ba0 416 PANTHER PTHR11712 3 414 5.7E-208 T 22-04-2016 VP2280 a52efa215b8e67ed09775c5dbe6423cc 190 Gene3D G3DSA:3.40.50.360 3 188 3.9E-66 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2280 a52efa215b8e67ed09775c5dbe6423cc 190 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VP2280 a52efa215b8e67ed09775c5dbe6423cc 190 Pfam PF03358 NADPH-dependent FMN reductase 12 135 4.1E-12 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VP2280 a52efa215b8e67ed09775c5dbe6423cc 190 SUPERFAMILY SSF52218 4 187 1.31E-55 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2280 a52efa215b8e67ed09775c5dbe6423cc 190 PANTHER PTHR30546 1 188 2.6E-69 T 22-04-2016 VP1225 e17fd3cea2daff38256cdd8940a3fed0 223 PANTHER PTHR24220 3 217 5.0E-102 T 22-04-2016 VP1225 e17fd3cea2daff38256cdd8940a3fed0 223 SUPERFAMILY SSF52540 1 217 2.23E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1225 e17fd3cea2daff38256cdd8940a3fed0 223 Pfam PF00005 ABC transporter 21 167 6.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1225 e17fd3cea2daff38256cdd8940a3fed0 223 SMART SM00382 30 218 5.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1225 e17fd3cea2daff38256cdd8940a3fed0 223 Gene3D G3DSA:3.40.50.300 1 217 7.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1225 e17fd3cea2daff38256cdd8940a3fed0 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1225 e17fd3cea2daff38256cdd8940a3fed0 223 PANTHER PTHR24220:SF430 3 217 5.0E-102 T 22-04-2016 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 2.9E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 Gene3D G3DSA:3.40.50.720 1 225 2.0E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 SUPERFAMILY SSF51735 1 335 1.4E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 PANTHER PTHR10366 2 234 1.5E-162 T 22-04-2016 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 PANTHER PTHR10366 253 336 1.5E-162 T 22-04-2016 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 Gene3D G3DSA:3.90.25.10 261 332 3.1E-19 T 22-04-2016 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 3.39E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 3.39E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 3.39E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.39E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 PANTHER PTHR10366:SF77 2 234 1.5E-162 T 22-04-2016 VP2023 f965ba77af2796a35e1c18b8dbd01ffc 336 PANTHER PTHR10366:SF77 253 336 1.5E-162 T 22-04-2016 VP2817 8771d4fba3dfdc5339ee9fa8f4d9097a 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 22-04-2016 IPR010920 LSM domain VP2817 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VP2817 8771d4fba3dfdc5339ee9fa8f4d9097a 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VP2817 8771d4fba3dfdc5339ee9fa8f4d9097a 87 PANTHER PTHR34772 1 87 1.2E-41 T 22-04-2016 VP2817 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Gene3D G3DSA:2.30.30.100 1 71 3.3E-38 T 22-04-2016 VP2817 8771d4fba3dfdc5339ee9fa8f4d9097a 87 PANTHER PTHR34772:SF1 1 87 1.2E-41 T 22-04-2016 VP1216 089d5a1c028ce473885c8c4a273b9285 400 PANTHER PTHR23502 15 391 4.4E-184 T 22-04-2016 VP1216 089d5a1c028ce473885c8c4a273b9285 400 SUPERFAMILY SSF103473 8 398 4.71E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP1216 089d5a1c028ce473885c8c4a273b9285 400 PANTHER PTHR23502:SF39 15 391 4.4E-184 T 22-04-2016 VP1216 089d5a1c028ce473885c8c4a273b9285 400 Gene3D G3DSA:1.20.1250.20 223 397 5.0E-8 T 22-04-2016 VP1216 089d5a1c028ce473885c8c4a273b9285 400 Gene3D G3DSA:1.20.1250.20 19 201 5.6E-32 T 22-04-2016 VP1216 089d5a1c028ce473885c8c4a273b9285 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 4.1E-120 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VP1216 089d5a1c028ce473885c8c4a273b9285 400 Pfam PF07690 Major Facilitator Superfamily 24 364 5.6E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP0051 3b7129bb243af3b84024c51c6c5a2090 334 Pfam PF05036 Sporulation related domain 73 142 1.7E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP2130 13bca30c9e2d2a16cd89259053c80a73 602 PANTHER PTHR10342 571 580 5.4E-91 T 22-04-2016 VP2130 13bca30c9e2d2a16cd89259053c80a73 602 PANTHER PTHR10342 230 550 5.4E-91 T 22-04-2016 VP2130 13bca30c9e2d2a16cd89259053c80a73 602 PIRSF PIRSF004950 6 600 5.1E-255 T 22-04-2016 IPR012159 Inner membrane protein YejM VP2130 13bca30c9e2d2a16cd89259053c80a73 602 Pfam PF00884 Sulfatase 267 515 6.3E-21 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VP2130 13bca30c9e2d2a16cd89259053c80a73 602 PANTHER PTHR10342:SF215 571 580 5.4E-91 T 22-04-2016 VP2130 13bca30c9e2d2a16cd89259053c80a73 602 PANTHER PTHR10342:SF215 230 550 5.4E-91 T 22-04-2016 VP2130 13bca30c9e2d2a16cd89259053c80a73 602 SUPERFAMILY SSF53649 257 584 1.05E-51 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP2130 13bca30c9e2d2a16cd89259053c80a73 602 Gene3D G3DSA:3.40.720.10 259 534 3.3E-34 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP2130 13bca30c9e2d2a16cd89259053c80a73 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 4.8E-99 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VP2412 991bea8fa108915eaf7985dad874c357 483 Pfam PF00437 Type II/IV secretion system protein 132 409 4.5E-86 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP2412 991bea8fa108915eaf7985dad874c357 483 PANTHER PTHR30258 15 480 7.7E-132 T 22-04-2016 VP2412 991bea8fa108915eaf7985dad874c357 483 Gene3D G3DSA:3.30.450.90 129 226 4.6E-37 T 22-04-2016 VP2412 991bea8fa108915eaf7985dad874c357 483 PANTHER PTHR30258:SF3 15 480 7.7E-132 T 22-04-2016 VP2412 991bea8fa108915eaf7985dad874c357 483 SUPERFAMILY SSF52540 112 453 2.25E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2412 991bea8fa108915eaf7985dad874c357 483 Gene3D G3DSA:3.40.50.300 231 445 2.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2317 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF54713 56 138 1.9E-18 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 3.7E-104 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF54713 142 278 1.22E-45 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 PANTHER PTHR11741 1 281 3.9E-125 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 76.638 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:1.10.286.20 181 225 1.5E-20 T 22-04-2016 VP2317 0071870ce5928c693a0a946932941d2e 281 Pfam PF00889 Elongation factor TS 71 261 6.9E-63 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 22-04-2016 IPR009060 UBA-like GO:0005515 VP2317 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:3.30.479.20 226 264 6.5E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:3.30.479.20 57 93 6.5E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:3.30.479.20 165 180 6.5E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VP2317 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:1.10.8.10 3 55 4.7E-26 T 22-04-2016 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 PANTHER PTHR21109 1 71 1.3E-26 T 22-04-2016 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 3.6E-23 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VP0407 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VP1517 f00541113d6786341bc64ead6aa8287f 1381 PANTHER PTHR32305:SF6 587 1130 9.9E-72 T 22-04-2016 VP1517 f00541113d6786341bc64ead6aa8287f 1381 PANTHER PTHR32305:SF6 312 372 9.9E-72 T 22-04-2016 VP1517 f00541113d6786341bc64ead6aa8287f 1381 PANTHER PTHR32305:SF6 415 567 9.9E-72 T 22-04-2016 VP1517 f00541113d6786341bc64ead6aa8287f 1381 Pfam PF03527 RHS protein 1029 1063 5.0E-13 T 22-04-2016 IPR001826 RHS protein VP1517 f00541113d6786341bc64ead6aa8287f 1381 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 421 461 4.0E-5 T 22-04-2016 IPR006530 YD repeat VP1517 f00541113d6786341bc64ead6aa8287f 1381 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 505 546 0.0027 T 22-04-2016 IPR006530 YD repeat VP1517 f00541113d6786341bc64ead6aa8287f 1381 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 463 500 5.4E-6 T 22-04-2016 IPR006530 YD repeat VP1517 f00541113d6786341bc64ead6aa8287f 1381 Pfam PF05593 RHS Repeat 422 447 2.8E-5 T 22-04-2016 IPR031325 RHS repeat VP1517 f00541113d6786341bc64ead6aa8287f 1381 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1057 1130 3.9E-27 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 VP1517 f00541113d6786341bc64ead6aa8287f 1381 PANTHER PTHR32305 587 1130 9.9E-72 T 22-04-2016 VP1517 f00541113d6786341bc64ead6aa8287f 1381 PANTHER PTHR32305 312 372 9.9E-72 T 22-04-2016 VP1517 f00541113d6786341bc64ead6aa8287f 1381 PANTHER PTHR32305 415 567 9.9E-72 T 22-04-2016 VP1517 f00541113d6786341bc64ead6aa8287f 1381 Pfam PF14414 A nuclease of the HNH/ENDO VII superfamily with conserved WHH 1324 1363 7.7E-12 T 22-04-2016 IPR032869 WHH domain-containing protein VP1517 f00541113d6786341bc64ead6aa8287f 1381 PRINTS PR00394 RHS protein signature 1076 1096 8.3E-12 T 22-04-2016 IPR001826 RHS protein VP1517 f00541113d6786341bc64ead6aa8287f 1381 PRINTS PR00394 RHS protein signature 1023 1043 8.3E-12 T 22-04-2016 IPR001826 RHS protein VP1517 f00541113d6786341bc64ead6aa8287f 1381 PRINTS PR00394 RHS protein signature 1099 1118 8.3E-12 T 22-04-2016 IPR001826 RHS protein VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 22-04-2016 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 SUPERFAMILY SSF53187 179 496 5.34E-125 T 22-04-2016 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 Gene3D G3DSA:3.40.220.10 1 161 5.4E-67 T 22-04-2016 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 PANTHER PTHR11963:SF13 7 502 4.0E-262 T 22-04-2016 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 9.3E-119 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.2E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 Gene3D G3DSA:3.40.630.10 171 499 3.0E-139 T 22-04-2016 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 PANTHER PTHR11963 7 502 4.0E-262 T 22-04-2016 VP2644 59d7b9f21bc93df80b6b9c5185e389ab 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.914 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VP0814 ba6e34bbaaec981eb6fbe6c2baff1a09 135 Pfam PF00571 CBS domain 78 125 2.1E-10 T 22-04-2016 IPR000644 CBS domain VP0814 ba6e34bbaaec981eb6fbe6c2baff1a09 135 SMART SM00116 83 130 1.9E-5 T 22-04-2016 IPR000644 CBS domain VP0814 ba6e34bbaaec981eb6fbe6c2baff1a09 135 SMART SM00116 16 65 11.0 T 22-04-2016 IPR000644 CBS domain VP0814 ba6e34bbaaec981eb6fbe6c2baff1a09 135 Gene3D G3DSA:3.10.580.10 8 126 2.0E-23 T 22-04-2016 VP0814 ba6e34bbaaec981eb6fbe6c2baff1a09 135 SUPERFAMILY SSF54631 7 126 3.16E-24 T 22-04-2016 VP0814 ba6e34bbaaec981eb6fbe6c2baff1a09 135 PANTHER PTHR11911 7 126 4.7E-12 T 22-04-2016 VP0814 ba6e34bbaaec981eb6fbe6c2baff1a09 135 PANTHER PTHR11911:SF68 7 126 4.7E-12 T 22-04-2016 VP2624 747159d89e49f49ce1aa59bcfef567c7 342 Gene3D G3DSA:3.40.50.150 112 192 9.1E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2624 747159d89e49f49ce1aa59bcfef567c7 342 Gene3D G3DSA:3.40.50.150 223 317 3.2E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2624 747159d89e49f49ce1aa59bcfef567c7 342 SUPERFAMILY SSF53335 106 316 1.14E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2624 747159d89e49f49ce1aa59bcfef567c7 342 Pfam PF01170 Putative RNA methylase family UPF0020 134 295 3.2E-13 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1414 2c990ee505d7f5a55fb1c7e12244cc34 268 Pfam PF09850 Type VI secretion system protein DotU 52 251 8.7E-50 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU VP1414 2c990ee505d7f5a55fb1c7e12244cc34 268 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 258 2.1E-61 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU VP1414 2c990ee505d7f5a55fb1c7e12244cc34 268 PANTHER PTHR38033:SF1 20 264 2.1E-32 T 22-04-2016 VP1414 2c990ee505d7f5a55fb1c7e12244cc34 268 PANTHER PTHR38033 20 264 2.1E-32 T 22-04-2016 VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 PANTHER PTHR30435 315 437 2.6E-88 T 22-04-2016 VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 PANTHER PTHR30435 1 126 2.6E-88 T 22-04-2016 VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 PANTHER PTHR30435:SF1 315 437 2.6E-88 T 22-04-2016 VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 PANTHER PTHR30435:SF1 1 126 2.6E-88 T 22-04-2016 VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 4.6E-96 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF00460 Flagella basal body rod protein 3 32 7.1E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 1.0E-15 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 SUPERFAMILY SSF117143 78 398 1.02E-68 T 22-04-2016 VP0778 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 1.4E-21 T 22-04-2016 IPR011491 Flagellar hook protein FlgE VP0160 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0160 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0160 aa5786e3bf1f603ececde4a6f8a5238f 90 PANTHER PTHR34476 2 90 2.4E-29 T 22-04-2016 VP0160 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0160 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 8.8E-18 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0160 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 77 4.2E-17 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP0160 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VP2431 103c71fe0c0b0f81fc98c47559bfc05d 326 Gene3D G3DSA:1.10.150.210 117 168 3.4E-28 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 VP2431 103c71fe0c0b0f81fc98c47559bfc05d 326 Gene3D G3DSA:3.40.50.1000 169 297 2.9E-36 T 22-04-2016 IPR023214 HAD-like domain VP2431 103c71fe0c0b0f81fc98c47559bfc05d 326 PANTHER PTHR10000 60 316 5.8E-110 T 22-04-2016 VP2431 103c71fe0c0b0f81fc98c47559bfc05d 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 5.3E-15 T 22-04-2016 VP2431 103c71fe0c0b0f81fc98c47559bfc05d 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 9.8E-29 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 VP2431 103c71fe0c0b0f81fc98c47559bfc05d 326 SUPERFAMILY SSF56784 107 310 6.75E-50 T 22-04-2016 IPR023214 HAD-like domain VP2431 103c71fe0c0b0f81fc98c47559bfc05d 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 310 6.0E-83 T 22-04-2016 VP2431 103c71fe0c0b0f81fc98c47559bfc05d 326 PANTHER PTHR10000:SF7 60 316 5.8E-110 T 22-04-2016 VP2578 256cfb603883b574ea1b27d41244163b 192 Pfam PF08281 Sigma-70, region 4 134 181 4.1E-18 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2578 256cfb603883b574ea1b27d41244163b 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 6.7E-103 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2578 256cfb603883b574ea1b27d41244163b 192 PANTHER PTHR30173 1 187 2.4E-56 T 22-04-2016 VP2578 256cfb603883b574ea1b27d41244163b 192 Pfam PF04542 Sigma-70 region 2 25 92 3.0E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2578 256cfb603883b574ea1b27d41244163b 192 SUPERFAMILY SSF88659 124 185 1.35E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2578 256cfb603883b574ea1b27d41244163b 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.6E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2578 256cfb603883b574ea1b27d41244163b 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2578 256cfb603883b574ea1b27d41244163b 192 Gene3D G3DSA:1.10.1740.10 2 111 2.2E-38 T 22-04-2016 VP2578 256cfb603883b574ea1b27d41244163b 192 SUPERFAMILY SSF88946 2 107 1.51E-32 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP2578 256cfb603883b574ea1b27d41244163b 192 PANTHER PTHR30173:SF1 1 187 2.4E-56 T 22-04-2016 VP2578 256cfb603883b574ea1b27d41244163b 192 Gene3D G3DSA:1.10.10.10 124 188 4.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1977 ca55ab22b11abeab9da959c0d417ef37 80 Pfam PF14056 Domain of unknown function (DUF4250) 24 75 2.4E-18 T 22-04-2016 IPR025346 Protein of unknown function DUF4250 VP2293 317d76137e900f81f0a93763b2d47c3c 154 Gene3D G3DSA:3.30.420.10 2 149 1.2E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2293 317d76137e900f81f0a93763b2d47c3c 154 Pfam PF00075 RNase H 3 141 6.6E-53 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VP2293 317d76137e900f81f0a93763b2d47c3c 154 PANTHER PTHR10642 1 152 6.9E-62 T 22-04-2016 VP2293 317d76137e900f81f0a93763b2d47c3c 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.438 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 VP2293 317d76137e900f81f0a93763b2d47c3c 154 SUPERFAMILY SSF53098 3 143 3.54E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2938 5a807f8ec7dd84f70923538d9abc2671 624 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 607 624 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site VP2938 5a807f8ec7dd84f70923538d9abc2671 624 SUPERFAMILY SSF56935 29 624 3.05E-102 T 22-04-2016 VP2938 5a807f8ec7dd84f70923538d9abc2671 624 Gene3D G3DSA:2.40.170.20 153 624 1.0E-71 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VP2938 5a807f8ec7dd84f70923538d9abc2671 624 Pfam PF00593 TonB dependent receptor 408 623 1.3E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VP2938 5a807f8ec7dd84f70923538d9abc2671 624 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 22-04-2016 IPR010916 TonB box, conserved site VP2938 5a807f8ec7dd84f70923538d9abc2671 624 PANTHER PTHR30069 7 587 8.0E-119 T 22-04-2016 VP2938 5a807f8ec7dd84f70923538d9abc2671 624 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 148 7.4E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VP2938 5a807f8ec7dd84f70923538d9abc2671 624 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 624 34.219 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 VP2938 5a807f8ec7dd84f70923538d9abc2671 624 Gene3D G3DSA:2.170.130.10 31 152 2.5E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VP2938 5a807f8ec7dd84f70923538d9abc2671 624 PANTHER PTHR30069:SF10 7 587 8.0E-119 T 22-04-2016 VP2909 a42a76adbcc4f3166941c43fd729ad58 534 SUPERFAMILY SSF56349 176 264 1.8E-12 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP2909 a42a76adbcc4f3166941c43fd729ad58 534 SUPERFAMILY SSF56349 312 402 1.8E-12 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP2909 a42a76adbcc4f3166941c43fd729ad58 534 Gene3D G3DSA:1.10.443.10 328 402 2.3E-14 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP2909 a42a76adbcc4f3166941c43fd729ad58 534 Gene3D G3DSA:1.10.443.10 176 291 2.3E-14 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP2909 a42a76adbcc4f3166941c43fd729ad58 534 Pfam PF00589 Phage integrase family 178 397 3.1E-5 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 SUPERFAMILY SSF54631 7 57 8.83E-8 T 22-04-2016 VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 Pfam PF00571 CBS domain 64 109 0.0011 T 22-04-2016 IPR000644 CBS domain VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 Pfam PF00571 CBS domain 9 53 9.5E-8 T 22-04-2016 IPR000644 CBS domain VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 Gene3D G3DSA:3.10.580.10 6 113 1.3E-23 T 22-04-2016 VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 Gene3D G3DSA:3.90.550.10 123 346 6.3E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 Pfam PF00483 Nucleotidyl transferase 124 345 7.4E-39 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 PANTHER PTHR22572:SF114 121 349 1.4E-127 T 22-04-2016 VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 SUPERFAMILY SSF53448 48 346 4.46E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 PANTHER PTHR22572 121 349 1.4E-127 T 22-04-2016 VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 SMART SM00116 70 117 3.6 T 22-04-2016 IPR000644 CBS domain VP0202 ab4aa982bc92b78d84db02ab6280f5cb 351 SMART SM00116 6 54 2.1 T 22-04-2016 IPR000644 CBS domain VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 SUPERFAMILY SSF54523 49 212 1.49E-58 T 22-04-2016 VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 PANTHER PTHR39583 8 226 9.5E-59 T 22-04-2016 VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 Gene3D G3DSA:2.10.70.20 162 210 1.1E-22 T 22-04-2016 VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 Pfam PF11612 Type II secretion system (T2SS), protein J 68 204 6.9E-41 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 Gene3D G3DSA:3.10.610.10 47 160 1.2E-47 T 22-04-2016 VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 Pfam PF13633 Prokaryotic N-terminal methylation site 16 41 4.0E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 17 207 1.8E-80 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 PANTHER PTHR39583:SF1 8 226 9.5E-59 T 22-04-2016 VP0139 6c6d00dd8b2275aa5bced1931f5eacb2 227 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 2.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP2479 5edda75e1d2ef7cc165886609aa8f9f4 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 9.6E-76 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VP2479 5edda75e1d2ef7cc165886609aa8f9f4 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site VP2479 5edda75e1d2ef7cc165886609aa8f9f4 560 PANTHER PTHR30290:SF31 45 543 1.5E-158 T 22-04-2016 VP2479 5edda75e1d2ef7cc165886609aa8f9f4 560 PIRSF PIRSF002741 5 542 3.2E-68 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VP2479 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.90.76.10 46 196 4.4E-40 T 22-04-2016 VP2479 5edda75e1d2ef7cc165886609aa8f9f4 560 SUPERFAMILY SSF53850 42 544 2.95E-107 T 22-04-2016 VP2479 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.10.105.10 273 513 3.1E-51 T 22-04-2016 VP2479 5edda75e1d2ef7cc165886609aa8f9f4 560 PANTHER PTHR30290 45 543 1.5E-158 T 22-04-2016 VP1218 7eae625d20522ca931e68df2c9c31b32 660 SUPERFAMILY SSF56935 426 634 3.66E-9 T 22-04-2016 VP1218 7eae625d20522ca931e68df2c9c31b32 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 59 660 1.0E-162 T 22-04-2016 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VP1218 7eae625d20522ca931e68df2c9c31b32 660 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 49 660 3.1E-206 T 22-04-2016 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VP1218 7eae625d20522ca931e68df2c9c31b32 660 Gene3D G3DSA:2.40.170.20 427 630 8.9E-11 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VP1692 6936804a9dd97fee2692cc3d3851db61 208 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 81 207 7.0E-53 T 22-04-2016 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 VP1692 6936804a9dd97fee2692cc3d3851db61 208 SUPERFAMILY SSF140591 88 188 3.53E-8 T 22-04-2016 VP1692 6936804a9dd97fee2692cc3d3851db61 208 Pfam PF09025 YopR, type III needle-polymerisation regulator 68 208 3.3E-66 T 22-04-2016 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.7E-132 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 Gene3D G3DSA:3.10.180.10 5 146 6.7E-44 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 PANTHER PTHR11959 1 355 8.6E-141 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 Gene3D G3DSA:3.10.180.10 159 354 3.5E-73 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 SUPERFAMILY SSF54593 5 341 7.92E-79 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 274 8.7E-14 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 PANTHER PTHR11959:SF1 1 355 8.6E-141 T 22-04-2016 VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 PIRSF PIRSF009283 1 355 2.8E-126 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VP1349 64bb29f762d204656f5ceb18e9f0a81d 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 1.7E-56 T 22-04-2016 VP2193 55384443644be1bef0ec1d18c4f9aa03 377 SUPERFAMILY SSF51735 93 258 9.87E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2193 55384443644be1bef0ec1d18c4f9aa03 377 Gene3D G3DSA:3.40.50.720 116 259 7.7E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2193 55384443644be1bef0ec1d18c4f9aa03 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.195 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VP2193 55384443644be1bef0ec1d18c4f9aa03 377 Gene3D G3DSA:3.40.50.720 1 115 8.1E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2193 55384443644be1bef0ec1d18c4f9aa03 377 PANTHER PTHR10996 1 331 5.6E-163 T 22-04-2016 VP2193 55384443644be1bef0ec1d18c4f9aa03 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 285 1.2E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VP2193 55384443644be1bef0ec1d18c4f9aa03 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 1.7E-33 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VP2193 55384443644be1bef0ec1d18c4f9aa03 377 PANTHER PTHR10996:SF111 1 331 5.6E-163 T 22-04-2016 VP2193 55384443644be1bef0ec1d18c4f9aa03 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 3.6E-27 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VP2193 55384443644be1bef0ec1d18c4f9aa03 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VP2193 55384443644be1bef0ec1d18c4f9aa03 377 SUPERFAMILY SSF52283 1 109 1.51E-23 T 22-04-2016 VP2236 25104c3e138f429defc630319c24c804 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.0E-134 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VP2236 25104c3e138f429defc630319c24c804 376 SUPERFAMILY SSF160544 250 355 6.54E-40 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VP2236 25104c3e138f429defc630319c24c804 376 Gene3D G3DSA:3.40.1690.10 218 357 1.2E-62 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VP2236 25104c3e138f429defc630319c24c804 376 PANTHER PTHR30531 1 361 3.3E-238 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP2236 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP2236 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP2236 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP2236 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP2236 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP2236 25104c3e138f429defc630319c24c804 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 7.5E-122 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VP2236 25104c3e138f429defc630319c24c804 376 PANTHER PTHR30531:SF4 1 361 3.3E-238 T 22-04-2016 VP1607 da6397e2363e546efc4d4fdeacdc8ef3 209 SMART SM00945 3 117 8.3E-66 T 22-04-2016 IPR016103 ProQ/FinO domain VP1607 da6397e2363e546efc4d4fdeacdc8ef3 209 SUPERFAMILY SSF48657 4 117 9.55E-41 T 22-04-2016 IPR016103 ProQ/FinO domain VP1607 da6397e2363e546efc4d4fdeacdc8ef3 209 Pfam PF04352 ProQ/FINO family 6 113 2.2E-43 T 22-04-2016 IPR016103 ProQ/FinO domain VP1607 da6397e2363e546efc4d4fdeacdc8ef3 209 PANTHER PTHR38106 1 209 1.5E-79 T 22-04-2016 VP1607 da6397e2363e546efc4d4fdeacdc8ef3 209 Gene3D G3DSA:1.10.1710.10 1 116 7.7E-38 T 22-04-2016 IPR016103 ProQ/FinO domain VP1607 da6397e2363e546efc4d4fdeacdc8ef3 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 209 30.424 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VP1607 da6397e2363e546efc4d4fdeacdc8ef3 209 PANTHER PTHR38106:SF1 1 209 1.5E-79 T 22-04-2016 VP2689 2876cdfb1001051c471230199773e91e 162 Pfam PF04093 rod shape-determining protein MreD 9 154 8.3E-40 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VP2689 2876cdfb1001051c471230199773e91e 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.5E-36 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VP2689 2876cdfb1001051c471230199773e91e 162 PANTHER PTHR37484 1 162 4.9E-65 T 22-04-2016 VP2689 2876cdfb1001051c471230199773e91e 162 PIRSF PIRSF018472 1 162 7.7E-42 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type VP1831 37c30e8133be3db4f4d53edaa437cb54 94 SUPERFAMILY SSF101386 1 93 9.16E-19 T 22-04-2016 VP1831 37c30e8133be3db4f4d53edaa437cb54 94 Gene3D G3DSA:1.10.287.1080 1 82 6.3E-18 T 22-04-2016 VP1831 37c30e8133be3db4f4d53edaa437cb54 94 PANTHER PTHR14552 1 94 1.3E-12 T 22-04-2016 VP1831 37c30e8133be3db4f4d53edaa437cb54 94 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 23 80 6.1E-9 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VPA1142 d5f96b7d617d49343092b224b8966aaf 118 PANTHER PTHR34990:SF1 1 118 6.7E-43 T 22-04-2016 VPA1142 d5f96b7d617d49343092b224b8966aaf 118 Gene3D G3DSA:3.60.21.10 5 34 5.7E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPA1142 d5f96b7d617d49343092b224b8966aaf 118 Gene3D G3DSA:3.60.21.10 82 111 5.7E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPA1142 d5f96b7d617d49343092b224b8966aaf 118 PANTHER PTHR34990 1 118 6.7E-43 T 22-04-2016 VPA1142 d5f96b7d617d49343092b224b8966aaf 118 SUPERFAMILY SSF56300 5 117 6.2E-8 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1543 2c68392cbaa27e8e44488a90b37d919d 206 Gene3D G3DSA:1.10.760.10 21 202 6.9E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1543 2c68392cbaa27e8e44488a90b37d919d 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 6.0E-82 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VP1543 2c68392cbaa27e8e44488a90b37d919d 206 PANTHER PTHR10422 30 165 5.1E-87 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VP1543 2c68392cbaa27e8e44488a90b37d919d 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 1.4E-80 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VP1543 2c68392cbaa27e8e44488a90b37d919d 206 PANTHER PTHR10422:SF23 30 165 5.1E-87 T 22-04-2016 VP1543 2c68392cbaa27e8e44488a90b37d919d 206 SUPERFAMILY SSF46626 21 202 3.32E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP1403 d88e0f74a4077c9b3b345bbb47a407ce 491 PANTHER PTHR35565:SF1 1 491 1.3E-300 T 22-04-2016 VP1403 d88e0f74a4077c9b3b345bbb47a407ce 491 PANTHER PTHR35565 1 491 1.3E-300 T 22-04-2016 VP1403 d88e0f74a4077c9b3b345bbb47a407ce 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 1.4E-179 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VP1403 d88e0f74a4077c9b3b345bbb47a407ce 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 4.9E-218 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath VP2968 19d60085ee58fa3aef40011e8d5c5e99 405 Pfam PF07690 Major Facilitator Superfamily 18 339 4.0E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP2968 19d60085ee58fa3aef40011e8d5c5e99 405 Gene3D G3DSA:1.20.1250.20 218 399 5.6E-8 T 22-04-2016 VP2968 19d60085ee58fa3aef40011e8d5c5e99 405 Gene3D G3DSA:1.20.1250.20 11 201 1.1E-15 T 22-04-2016 VP2968 19d60085ee58fa3aef40011e8d5c5e99 405 PANTHER PTHR23547 1 398 8.3E-181 T 22-04-2016 VP2968 19d60085ee58fa3aef40011e8d5c5e99 405 PANTHER PTHR23547:SF1 1 398 8.3E-181 T 22-04-2016 VP2968 19d60085ee58fa3aef40011e8d5c5e99 405 SUPERFAMILY SSF103473 9 399 9.94E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP1638 6a8b250acfc5ec8401baf999061129bb 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 4.7E-84 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VP1638 6a8b250acfc5ec8401baf999061129bb 232 PIRSF PIRSF006293 1 225 3.2E-84 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VP1638 6a8b250acfc5ec8401baf999061129bb 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.643 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VP1638 6a8b250acfc5ec8401baf999061129bb 232 SUPERFAMILY SSF52402 1 212 1.74E-67 T 22-04-2016 VP1638 6a8b250acfc5ec8401baf999061129bb 232 Gene3D G3DSA:3.40.50.620 1 212 4.4E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1638 6a8b250acfc5ec8401baf999061129bb 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.0E-85 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VP1638 6a8b250acfc5ec8401baf999061129bb 232 PANTHER PTHR11587 1 212 2.3E-103 T 22-04-2016 VP1638 6a8b250acfc5ec8401baf999061129bb 232 PANTHER PTHR11587:SF3 1 212 2.3E-103 T 22-04-2016 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 SMART SM00474 108 234 0.0017 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 SUPERFAMILY SSF53098 111 234 2.88E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 PANTHER PTHR10133:SF27 94 234 2.2E-57 T 22-04-2016 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 PANTHER PTHR10133:SF27 2 64 2.2E-57 T 22-04-2016 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 SUPERFAMILY SSF47807 6 67 7.53E-8 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 PANTHER PTHR10133 2 64 2.2E-57 T 22-04-2016 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 PANTHER PTHR10133 94 234 2.2E-57 T 22-04-2016 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 Pfam PF01612 3'-5' exonuclease 108 227 1.8E-26 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VPA0121 3c9defe19724e574a77b5efb412c2cac 234 Gene3D G3DSA:3.30.420.10 107 234 1.8E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 Gene3D G3DSA:1.10.1060.10 105 234 1.0E-45 T 22-04-2016 VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 PANTHER PTHR11921:SF29 4 234 7.3E-127 T 22-04-2016 VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 SUPERFAMILY SSF54292 1 104 3.07E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 2.7E-10 T 22-04-2016 VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 Gene3D G3DSA:3.10.20.30 1 104 1.7E-36 T 22-04-2016 IPR012675 Beta-grasp domain VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 PANTHER PTHR11921 4 234 7.3E-127 T 22-04-2016 VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 8.2E-30 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP0846 c8c9e7215234c235a9c4811a2c2bca47 236 SUPERFAMILY SSF46548 105 233 5.76E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP0342 0c5ee8d11940e679f307ab4fe746dd3d 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.348 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0342 0c5ee8d11940e679f307ab4fe746dd3d 200 Gene3D G3DSA:3.20.19.10 1 194 2.3E-49 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VP0342 0c5ee8d11940e679f307ab4fe746dd3d 200 PANTHER PTHR11670 1 200 7.3E-119 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0342 0c5ee8d11940e679f307ab4fe746dd3d 200 Pfam PF00694 Aconitase C-terminal domain 1 125 6.0E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP0342 0c5ee8d11940e679f307ab4fe746dd3d 200 SUPERFAMILY SSF52016 1 196 1.39E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VP0342 0c5ee8d11940e679f307ab4fe746dd3d 200 PANTHER PTHR11670:SF27 1 200 7.3E-119 T 22-04-2016 VP0342 0c5ee8d11940e679f307ab4fe746dd3d 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 7.2E-99 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP2404 9777d1a753e9748ca6be06e81ae0d38b 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 3.8E-25 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family VP2404 9777d1a753e9748ca6be06e81ae0d38b 150 Gene3D G3DSA:2.60.120.370 4 142 1.1E-14 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family VP2404 9777d1a753e9748ca6be06e81ae0d38b 150 SUPERFAMILY SSF51197 1 143 8.24E-24 T 22-04-2016 VP2075 07a516a1bae52713f3b5955e40101879 322 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 53.029 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VP2075 07a516a1bae52713f3b5955e40101879 322 PANTHER PTHR11082:SF26 1 317 4.7E-185 T 22-04-2016 VP2075 07a516a1bae52713f3b5955e40101879 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2075 07a516a1bae52713f3b5955e40101879 322 PANTHER PTHR11082 1 317 4.7E-185 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2075 07a516a1bae52713f3b5955e40101879 322 Gene3D G3DSA:3.20.20.70 2 240 4.1E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2075 07a516a1bae52713f3b5955e40101879 322 Pfam PF01207 Dihydrouridine synthase (Dus) 5 296 3.7E-78 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2075 07a516a1bae52713f3b5955e40101879 322 PIRSF PIRSF006621 1 322 7.3E-76 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VP2075 07a516a1bae52713f3b5955e40101879 322 SUPERFAMILY SSF51395 1 313 2.01E-73 T 22-04-2016 VP1366 0d1be7bd57261bfc11a7ec2b4e42d007 283 SUPERFAMILY SSF53613 4 275 1.21E-33 T 22-04-2016 IPR029056 Ribokinase-like VP1366 0d1be7bd57261bfc11a7ec2b4e42d007 283 PANTHER PTHR10534:SF0 1 282 9.5E-30 T 22-04-2016 VP1366 0d1be7bd57261bfc11a7ec2b4e42d007 283 Gene3D G3DSA:3.40.1190.20 4 275 1.8E-38 T 22-04-2016 IPR029056 Ribokinase-like VP1366 0d1be7bd57261bfc11a7ec2b4e42d007 283 PANTHER PTHR10534 1 282 9.5E-30 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 VP1366 0d1be7bd57261bfc11a7ec2b4e42d007 283 Pfam PF08543 Phosphomethylpyrimidine kinase 115 251 5.6E-8 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 VP1366 0d1be7bd57261bfc11a7ec2b4e42d007 283 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 276 3.1E-46 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PANTHER PTHR30295:SF9 1 153 3.1E-53 T 22-04-2016 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 Gene3D G3DSA:1.20.1260.10 1 155 2.4E-66 T 22-04-2016 IPR012347 Ferritin-related VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 Pfam PF00210 Ferritin-like domain 8 143 8.4E-41 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PIRSF PIRSF002560 1 157 4.1E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.3E-82 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.1E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.1E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.1E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.1E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.1E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.1E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.1E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 SUPERFAMILY SSF47240 1 153 1.52E-55 T 22-04-2016 IPR009078 Ferritin-like superfamily VP2768 445e4e1a7cd80b4ad7b41193e24e498d 158 PANTHER PTHR30295 1 153 3.1E-53 T 22-04-2016 VP0509 3852088f74f04c27daae4fdfffab1796 305 Pfam PF00589 Phage integrase family 120 291 2.8E-53 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0509 3852088f74f04c27daae4fdfffab1796 305 SUPERFAMILY SSF47823 11 107 1.1E-33 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal VP0509 3852088f74f04c27daae4fdfffab1796 305 PANTHER PTHR30349 14 305 1.8E-119 T 22-04-2016 VP0509 3852088f74f04c27daae4fdfffab1796 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.739 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VP0509 3852088f74f04c27daae4fdfffab1796 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 2.3E-19 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VP0509 3852088f74f04c27daae4fdfffab1796 305 SUPERFAMILY SSF56349 113 303 2.12E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP0509 3852088f74f04c27daae4fdfffab1796 305 PANTHER PTHR30349:SF5 14 305 1.8E-119 T 22-04-2016 VP0509 3852088f74f04c27daae4fdfffab1796 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 3.2E-115 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VP0509 3852088f74f04c27daae4fdfffab1796 305 Gene3D G3DSA:1.10.150.130 14 106 3.1E-27 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VP0509 3852088f74f04c27daae4fdfffab1796 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 11 305 30.274 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VP0509 3852088f74f04c27daae4fdfffab1796 305 Gene3D G3DSA:1.10.443.10 120 297 1.9E-59 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 676 5.4E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 SUPERFAMILY SSF56281 494 741 5.28E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 PANTHER PTHR30619:SF2 1 748 2.8E-160 T 22-04-2016 VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 Gene3D G3DSA:3.60.15.10 491 715 5.7E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 137 718 3.9E-119 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 PANTHER PTHR30619 1 748 2.8E-160 T 22-04-2016 VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 1.9E-28 T 22-04-2016 IPR004477 ComEC/Rec2-related protein VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 SMART SM00849 506 689 5.6E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP0981 ea3dd9bb61b6592fc5bb852425aa91c9 752 Pfam PF03772 Competence protein 208 465 1.8E-51 T 22-04-2016 IPR004477 ComEC/Rec2-related protein VP2296 f843861f316eeed9c2c30e2966f867c3 528 SMART SM00257 476 520 1.8E-9 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 SMART SM00257 345 388 4.3E-14 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 SMART SM00257 419 463 8.2E-13 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 PANTHER PTHR21666 65 502 6.5E-192 T 22-04-2016 VP2296 f843861f316eeed9c2c30e2966f867c3 528 SUPERFAMILY SSF54106 345 388 7.59E-11 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 SUPERFAMILY SSF54106 419 463 9.29E-11 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 Gene3D G3DSA:3.10.350.10 419 464 1.4E-16 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 Gene3D G3DSA:3.10.350.10 474 520 8.0E-16 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 Gene3D G3DSA:3.10.350.10 344 389 2.7E-16 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 PANTHER PTHR21666:SF203 65 502 6.5E-192 T 22-04-2016 VP2296 f843861f316eeed9c2c30e2966f867c3 528 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VP2296 f843861f316eeed9c2c30e2966f867c3 528 Pfam PF01464 Transglycosylase SLT domain 127 228 8.3E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VP2296 f843861f316eeed9c2c30e2966f867c3 528 Pfam PF01476 LysM domain 477 518 4.2E-10 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 Pfam PF01476 LysM domain 346 388 3.7E-12 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 Pfam PF01476 LysM domain 420 462 2.0E-10 T 22-04-2016 IPR018392 LysM domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 SUPERFAMILY SSF53955 114 271 8.72E-42 T 22-04-2016 IPR023346 Lysozyme-like domain VP2296 f843861f316eeed9c2c30e2966f867c3 528 Gene3D G3DSA:1.10.530.10 110 273 3.4E-45 T 22-04-2016 VP2296 f843861f316eeed9c2c30e2966f867c3 528 SUPERFAMILY SSF54106 474 521 7.72E-10 T 22-04-2016 IPR018392 LysM domain VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 3.3E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 SUPERFAMILY SSF52540 1 192 1.81E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 Gene3D G3DSA:3.40.50.300 1 213 1.4E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 Pfam PF00406 Adenylate kinase 5 185 8.3E-60 T 22-04-2016 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 PANTHER PTHR23359 1 213 8.9E-112 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.623 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 8.2E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP0822 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VP1689 e710d54c9caf81f069bf259391018d5a 237 Pfam PF06578 YOP proteins translocation protein K (YscK) 26 237 2.3E-88 T 22-04-2016 IPR009510 Type III secretion system, secretion protein K GO:0009405 VP1689 e710d54c9caf81f069bf259391018d5a 237 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 30 236 3.0E-119 T 22-04-2016 IPR009510 Type III secretion system, secretion protein K GO:0009405 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 6.2E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 6.2E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 6.2E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 Pfam PF00672 HAMP domain 347 417 8.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 SUPERFAMILY SSF58104 388 697 3.79E-71 T 22-04-2016 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 506 695 2.5E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 SMART SM00304 366 420 2.7E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 SMART SM00283 435 696 7.7E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 Gene3D G3DSA:3.30.450.20 190 330 9.4E-12 T 22-04-2016 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 Gene3D G3DSA:1.10.287.950 450 666 6.5E-53 T 22-04-2016 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 PANTHER PTHR32089 177 698 1.9E-129 T 22-04-2016 VP1981 de1f16d288987a6b34c9a176a8982fa4 698 PANTHER PTHR32089:SF34 177 698 1.9E-129 T 22-04-2016 VP0132 bb8d16d25b8a64e1f83505759b710d84 307 Pfam PF11356 Type II secretion system protein C 37 177 3.3E-43 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal VP0132 bb8d16d25b8a64e1f83505759b710d84 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 9.4E-74 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VP0132 bb8d16d25b8a64e1f83505759b710d84 307 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 245 271 - T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VP0132 bb8d16d25b8a64e1f83505759b710d84 307 Gene3D G3DSA:2.30.42.10 242 304 1.7E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP0132 bb8d16d25b8a64e1f83505759b710d84 307 SUPERFAMILY SSF50156 211 307 5.46E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP1239 5d7834085e5ecdeec767586fbc87a75e 301 PANTHER PTHR35804:SF1 2 301 1.2E-86 T 22-04-2016 VP1239 5d7834085e5ecdeec767586fbc87a75e 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 4.0E-80 T 22-04-2016 IPR005642 Lysine exporter LysO VP1239 5d7834085e5ecdeec767586fbc87a75e 301 PANTHER PTHR35804 2 301 1.2E-86 T 22-04-2016 VP1239 5d7834085e5ecdeec767586fbc87a75e 301 Pfam PF03956 Membrane protein of unknown function (DUF340) 112 297 2.1E-52 T 22-04-2016 IPR005642 Lysine exporter LysO VP0319 203a297866f120b24689c80a6161208b 145 PIRSF PIRSF006276 1 145 1.6E-18 T 22-04-2016 IPR006015 Universal stress protein A VP0319 203a297866f120b24689c80a6161208b 145 PANTHER PTHR31964 1 144 3.0E-28 T 22-04-2016 VP0319 203a297866f120b24689c80a6161208b 145 Gene3D G3DSA:3.40.50.620 1 144 1.6E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0319 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 120 142 2.3E-11 T 22-04-2016 IPR006015 Universal stress protein A VP0319 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 2 20 2.3E-11 T 22-04-2016 IPR006015 Universal stress protein A VP0319 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 102 114 2.3E-11 T 22-04-2016 IPR006015 Universal stress protein A VP0319 203a297866f120b24689c80a6161208b 145 PANTHER PTHR31964:SF42 1 144 3.0E-28 T 22-04-2016 VP0319 203a297866f120b24689c80a6161208b 145 SUPERFAMILY SSF52402 2 143 1.93E-34 T 22-04-2016 VP0319 203a297866f120b24689c80a6161208b 145 Pfam PF00582 Universal stress protein family 1 142 1.5E-32 T 22-04-2016 IPR006016 UspA GO:0006950 VP1867 27dfe1959b5ddea1dffca69cadb0b606 195 Pfam PF13023 HD domain 15 173 5.3E-52 T 22-04-2016 IPR006674 HD domain VP1867 27dfe1959b5ddea1dffca69cadb0b606 195 Gene3D G3DSA:1.10.3210.10 3 187 3.4E-37 T 22-04-2016 IPR006674 HD domain VP1867 27dfe1959b5ddea1dffca69cadb0b606 195 PANTHER PTHR11845 7 142 1.8E-23 T 22-04-2016 VP1867 27dfe1959b5ddea1dffca69cadb0b606 195 SUPERFAMILY SSF109604 4 182 2.24E-42 T 22-04-2016 VP1338 582d383c8979b20447441b0dcb05a9c6 282 SUPERFAMILY SSF161098 10 279 2.99E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1338 582d383c8979b20447441b0dcb05a9c6 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 2.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1338 582d383c8979b20447441b0dcb05a9c6 282 PANTHER PTHR30193 10 282 1.9E-76 T 22-04-2016 VP1338 582d383c8979b20447441b0dcb05a9c6 282 PANTHER PTHR30193:SF20 10 282 1.9E-76 T 22-04-2016 VP1338 582d383c8979b20447441b0dcb05a9c6 282 Gene3D G3DSA:1.10.3720.10 20 274 2.2E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1313 3076024723039e745f44502b81c828fb 191 Gene3D G3DSA:1.10.3420.10 12 127 3.7E-17 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VP1313 3076024723039e745f44502b81c828fb 191 Gene3D G3DSA:1.10.3420.10 166 189 3.7E-17 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VP1313 3076024723039e745f44502b81c828fb 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 3.6E-7 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VP2519 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.920 707 886 3.0E-74 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VP2519 65519854fa476793c27d9cfa107f2d21 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 6.3E-10 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 480 535 0.0 T 22-04-2016 IPR033247 Transketolase family VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 787 869 0.0 T 22-04-2016 IPR033247 Transketolase family VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 553 768 0.0 T 22-04-2016 IPR033247 Transketolase family VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 361 450 0.0 T 22-04-2016 IPR033247 Transketolase family VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 73 292 0.0 T 22-04-2016 IPR033247 Transketolase family VP2519 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52922 702 886 1.6E-58 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 480 535 0.0 T 22-04-2016 VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 787 869 0.0 T 22-04-2016 VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 553 768 0.0 T 22-04-2016 VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 361 450 0.0 T 22-04-2016 VP2519 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 73 292 0.0 T 22-04-2016 VP2519 65519854fa476793c27d9cfa107f2d21 887 PIRSF PIRSF000156 1 887 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VP2519 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.970 473 705 2.2E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2519 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52518 56 469 1.45E-140 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2519 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52518 474 701 1.3E-98 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2519 65519854fa476793c27d9cfa107f2d21 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VP2519 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.970 55 469 1.2E-153 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP2088 e4ae44582212fbd4eb069bd7e393747a 324 SMART SM00382 33 239 1.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2088 e4ae44582212fbd4eb069bd7e393747a 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2088 e4ae44582212fbd4eb069bd7e393747a 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 9.7E-24 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP2088 e4ae44582212fbd4eb069bd7e393747a 324 PANTHER PTHR24220 6 316 1.1E-160 T 22-04-2016 VP2088 e4ae44582212fbd4eb069bd7e393747a 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 5.5E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP2088 e4ae44582212fbd4eb069bd7e393747a 324 Gene3D G3DSA:3.40.50.300 3 255 3.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2088 e4ae44582212fbd4eb069bd7e393747a 324 PANTHER PTHR24220:SF535 6 316 1.1E-160 T 22-04-2016 VP2088 e4ae44582212fbd4eb069bd7e393747a 324 SUPERFAMILY SSF52540 32 302 1.78E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2088 e4ae44582212fbd4eb069bd7e393747a 324 Pfam PF00005 ABC transporter 25 181 1.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2806 cb691f6b50ab1abad2529a56a2109299 247 SUPERFAMILY SSF75217 69 245 4.64E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VP2806 cb691f6b50ab1abad2529a56a2109299 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 5.5E-86 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 VP2806 cb691f6b50ab1abad2529a56a2109299 247 Gene3D G3DSA:3.40.1280.10 91 245 4.3E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VP2806 cb691f6b50ab1abad2529a56a2109299 247 SMART SM00967 5 81 5.8E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VP2806 cb691f6b50ab1abad2529a56a2109299 247 SUPERFAMILY SSF55315 3 76 6.24E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VP2806 cb691f6b50ab1abad2529a56a2109299 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 76 3.2E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VP2806 cb691f6b50ab1abad2529a56a2109299 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.305 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VP2806 cb691f6b50ab1abad2529a56a2109299 247 Gene3D G3DSA:3.30.1330.30 2 76 4.7E-25 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VP2806 cb691f6b50ab1abad2529a56a2109299 247 PANTHER PTHR12029 4 246 4.2E-78 T 22-04-2016 VP2806 cb691f6b50ab1abad2529a56a2109299 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.1E-39 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VP0747 3d563b8f5dae794025d1e6989cfc2357 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 6.2E-116 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VP0747 3d563b8f5dae794025d1e6989cfc2357 283 Pfam PF00793 DAHP synthetase I family 10 275 9.8E-70 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VP0747 3d563b8f5dae794025d1e6989cfc2357 283 PANTHER PTHR21057 1 283 6.3E-223 T 22-04-2016 VP0747 3d563b8f5dae794025d1e6989cfc2357 283 PANTHER PTHR21057:SF6 1 283 6.3E-223 T 22-04-2016 VP0747 3d563b8f5dae794025d1e6989cfc2357 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.166 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VP0747 3d563b8f5dae794025d1e6989cfc2357 283 Gene3D G3DSA:3.20.20.70 16 279 6.3E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0747 3d563b8f5dae794025d1e6989cfc2357 283 SUPERFAMILY SSF51569 2 278 3.57E-104 T 22-04-2016 VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 Pfam PF06580 Histidine kinase 366 444 1.0E-26 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 Gene3D G3DSA:3.30.450.40 255 352 9.2E-5 T 22-04-2016 IPR029016 GAF domain-like VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 PANTHER PTHR34220:SF3 1 553 2.7E-269 T 22-04-2016 VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 SUPERFAMILY SSF55874 428 524 1.92E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 Gene3D G3DSA:3.30.565.10 414 553 1.1E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 Pfam PF13492 GAF domain 241 351 6.5E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 SUPERFAMILY SSF55781 227 351 4.49E-7 T 22-04-2016 IPR029016 GAF domain-like VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 PANTHER PTHR34220 1 553 2.7E-269 T 22-04-2016 VP0539 6fd80f18d3eded2fbc2aafad0268838f 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 2.7E-59 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VP2226 fab83fdb56c8e16bd168bbddb3b88eec 370 SUPERFAMILY SSF50341 224 360 9.55E-15 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2226 fab83fdb56c8e16bd168bbddb3b88eec 370 SMART SM00260 223 357 3.4E-4 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2226 fab83fdb56c8e16bd168bbddb3b88eec 370 Pfam PF01584 CheW-like domain 227 359 9.6E-15 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VP2226 fab83fdb56c8e16bd168bbddb3b88eec 370 PIRSF PIRSF020479 5 370 9.0E-152 T 22-04-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VP2002 d45aad8071826afa2863f331b13a410c 234 SUPERFAMILY SSF53335 15 229 5.48E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2002 d45aad8071826afa2863f331b13a410c 234 PANTHER PTHR10108 20 174 2.3E-20 T 22-04-2016 VP2002 d45aad8071826afa2863f331b13a410c 234 PANTHER PTHR10108 209 227 2.3E-20 T 22-04-2016 VP2002 d45aad8071826afa2863f331b13a410c 234 Pfam PF13649 Methyltransferase domain 42 136 9.2E-18 T 22-04-2016 VP2002 d45aad8071826afa2863f331b13a410c 234 Gene3D G3DSA:3.40.50.150 14 231 1.5E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1134 e089ee2272b4fc5d07daf1c8bee8317d 533 Pfam PF03553 Na+/H+ antiporter family 165 497 8.4E-109 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VP1134 e089ee2272b4fc5d07daf1c8bee8317d 533 PANTHER PTHR33451:SF7 1 531 2.5E-218 T 22-04-2016 VP1134 e089ee2272b4fc5d07daf1c8bee8317d 533 PANTHER PTHR33451 1 531 2.5E-218 T 22-04-2016 VP0425 7c96c909a5b006eae85f71c876fb4658 442 Gene3D G3DSA:1.20.1600.10 23 430 2.2E-81 T 22-04-2016 VP0425 7c96c909a5b006eae85f71c876fb4658 442 SUPERFAMILY SSF56954 1 430 3.27E-90 T 22-04-2016 VP0425 7c96c909a5b006eae85f71c876fb4658 442 PANTHER PTHR30026:SF3 1 441 6.2E-140 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VP0425 7c96c909a5b006eae85f71c876fb4658 442 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 437 4.4E-106 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VP0425 7c96c909a5b006eae85f71c876fb4658 442 PANTHER PTHR30026 1 441 6.2E-140 T 22-04-2016 VP0425 7c96c909a5b006eae85f71c876fb4658 442 Pfam PF02321 Outer membrane efflux protein 240 424 4.3E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP0425 7c96c909a5b006eae85f71c876fb4658 442 Pfam PF02321 Outer membrane efflux protein 25 216 3.3E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP0163 8d2f280c32722a22f86f05aa8bc74d27 210 PRINTS PR01374 Gram-negative bacterial tonB protein signature 147 165 8.2E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VP0163 8d2f280c32722a22f86f05aa8bc74d27 210 PRINTS PR01374 Gram-negative bacterial tonB protein signature 59 69 8.2E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VP0163 8d2f280c32722a22f86f05aa8bc74d27 210 PANTHER PTHR33446 125 210 3.9E-15 T 22-04-2016 VP0163 8d2f280c32722a22f86f05aa8bc74d27 210 PANTHER PTHR33446:SF1 125 210 3.9E-15 T 22-04-2016 VP0163 8d2f280c32722a22f86f05aa8bc74d27 210 SUPERFAMILY SSF74653 122 207 1.44E-17 T 22-04-2016 VP0163 8d2f280c32722a22f86f05aa8bc74d27 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 133 209 8.3E-13 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 VP0163 8d2f280c32722a22f86f05aa8bc74d27 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 1.3E-15 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 VP0163 8d2f280c32722a22f86f05aa8bc74d27 210 Gene3D G3DSA:3.30.1150.10 131 208 4.8E-8 T 22-04-2016 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 Pfam PF12833 Helix-turn-helix domain 195 267 1.2E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 SUPERFAMILY SSF51215 26 136 1.18E-17 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 Gene3D G3DSA:2.60.120.280 20 137 8.8E-13 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 Gene3D G3DSA:1.10.10.60 223 266 1.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 PANTHER PTHR11019 4 266 7.1E-97 T 22-04-2016 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 Pfam PF02311 AraC-like ligand binding domain 18 136 6.1E-20 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 SUPERFAMILY SSF46689 170 218 9.86E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 1.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 1.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 SUPERFAMILY SSF46689 221 266 1.16E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 SMART SM00342 185 267 2.4E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 PANTHER PTHR11019:SF94 4 266 7.1E-97 T 22-04-2016 VP3009 73e21e69a377bd34f0d2e4019c3f6c9e 268 Gene3D G3DSA:1.10.10.60 168 222 2.2E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0881 be411bc2bca2a7e9c618de0951e117b0 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 3.1E-27 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VP0881 be411bc2bca2a7e9c618de0951e117b0 407 Gene3D G3DSA:3.40.47.10 1 260 3.2E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0881 be411bc2bca2a7e9c618de0951e117b0 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VP0881 be411bc2bca2a7e9c618de0951e117b0 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 9.5E-40 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VP0881 be411bc2bca2a7e9c618de0951e117b0 407 SUPERFAMILY SSF53901 2 252 3.57E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0881 be411bc2bca2a7e9c618de0951e117b0 407 Gene3D G3DSA:3.40.47.10 264 406 2.6E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0881 be411bc2bca2a7e9c618de0951e117b0 407 SUPERFAMILY SSF53901 216 406 5.77E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP0881 be411bc2bca2a7e9c618de0951e117b0 407 PANTHER PTHR11712 2 406 1.6E-110 T 22-04-2016 VP0881 be411bc2bca2a7e9c618de0951e117b0 407 SMART SM00825 Beta-ketoacyl synthase 5 377 5.2E-11 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VP2058 d1a29f63b69484c7b27289e3e045f618 56 PANTHER PTHR35534 1 56 1.3E-27 T 22-04-2016 VP2058 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VP2058 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VP2058 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VP2058 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VPA1737 fcd054544cec75c9ee2df9f371593538 197 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 15 174 1.8E-41 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPA1737 fcd054544cec75c9ee2df9f371593538 197 PANTHER PTHR34217 1 186 1.4E-91 T 22-04-2016 VPA1737 fcd054544cec75c9ee2df9f371593538 197 PANTHER PTHR34217:SF1 1 186 1.4E-91 T 22-04-2016 VPA1737 fcd054544cec75c9ee2df9f371593538 197 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 154 170 1.1E-25 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPA1737 fcd054544cec75c9ee2df9f371593538 197 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 127 146 1.1E-25 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPA1737 fcd054544cec75c9ee2df9f371593538 197 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 11 31 1.1E-25 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPA1737 fcd054544cec75c9ee2df9f371593538 197 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 107 126 1.1E-25 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPA1737 fcd054544cec75c9ee2df9f371593538 197 SUPERFAMILY SSF55486 5 181 1.14E-39 T 22-04-2016 VP1276 8b89860027d82af0407da7a79fa664d6 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.238 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1276 8b89860027d82af0407da7a79fa664d6 416 SUPERFAMILY SSF51338 373 412 2.65E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP1276 8b89860027d82af0407da7a79fa664d6 416 SUPERFAMILY SSF51338 1 72 2.65E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP1276 8b89860027d82af0407da7a79fa664d6 416 PANTHER PTHR22642:SF1 54 411 9.3E-138 T 22-04-2016 VP1276 8b89860027d82af0407da7a79fa664d6 416 PANTHER PTHR22642 54 411 9.3E-138 T 22-04-2016 VP1276 8b89860027d82af0407da7a79fa664d6 416 Gene3D G3DSA:2.30.40.10 357 395 4.2E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP1276 8b89860027d82af0407da7a79fa664d6 416 Gene3D G3DSA:2.30.40.10 1 82 1.8E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VP1276 8b89860027d82af0407da7a79fa664d6 416 SUPERFAMILY SSF51556 72 371 1.7E-81 T 22-04-2016 IPR032466 Metal-dependent hydrolase VP1276 8b89860027d82af0407da7a79fa664d6 416 Gene3D G3DSA:3.20.20.140 83 356 4.3E-37 T 22-04-2016 VP1276 8b89860027d82af0407da7a79fa664d6 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 409 3.4E-148 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VP1276 8b89860027d82af0407da7a79fa664d6 416 Pfam PF01979 Amidohydrolase family 70 408 1.4E-13 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VP0511 8ebcf93393b33600772720c5fba1d4e8 579 SUPERFAMILY SSF64182 45 464 4.84E-119 T 22-04-2016 VP0511 8ebcf93393b33600772720c5fba1d4e8 579 Pfam PF01368 DHH family 71 205 3.1E-11 T 22-04-2016 IPR001667 DDH domain VP0511 8ebcf93393b33600772720c5fba1d4e8 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 3.5E-158 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VP0511 8ebcf93393b33600772720c5fba1d4e8 579 PANTHER PTHR30255 1 578 4.5E-225 T 22-04-2016 VP0511 8ebcf93393b33600772720c5fba1d4e8 579 Pfam PF02272 DHHA1 domain 380 449 2.0E-16 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VP0511 8ebcf93393b33600772720c5fba1d4e8 579 PANTHER PTHR30255:SF2 1 578 4.5E-225 T 22-04-2016 VP0178 7a2afd9b0ec68ac6bf714e32329129ae 213 PANTHER PTHR19278:SF36 1 213 9.8E-144 T 22-04-2016 VP0178 7a2afd9b0ec68ac6bf714e32329129ae 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 6.3E-69 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 VP0178 7a2afd9b0ec68ac6bf714e32329129ae 213 PANTHER PTHR19278 1 213 9.8E-144 T 22-04-2016 VP0178 7a2afd9b0ec68ac6bf714e32329129ae 213 SUPERFAMILY SSF53271 2 211 1.02E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP0178 7a2afd9b0ec68ac6bf714e32329129ae 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.971 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 VP0178 7a2afd9b0ec68ac6bf714e32329129ae 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 9.7E-13 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VP0178 7a2afd9b0ec68ac6bf714e32329129ae 213 Gene3D G3DSA:3.40.50.2020 7 212 5.7E-85 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 Gene3D G3DSA:3.40.50.300 3 204 1.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 PANTHER PTHR10285 1 211 1.0E-94 T 22-04-2016 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.464 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 SUPERFAMILY SSF52540 6 204 1.31E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 6.2E-90 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VP2067 2a4e989354cda5a2f53c15715bc70d3f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.3E-41 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VP2777 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF13309 HTH domain 174 231 1.6E-18 T 22-04-2016 VP2777 6ce09169e4cd3489b16b3d6c64b12207 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 22-04-2016 IPR013559 YheO-like VP2777 6ce09169e4cd3489b16b3d6c64b12207 238 PANTHER PTHR35568 14 238 6.8E-167 T 22-04-2016 VP2777 6ce09169e4cd3489b16b3d6c64b12207 238 PANTHER PTHR35568:SF3 14 238 6.8E-167 T 22-04-2016 VP2777 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF08348 YheO-like PAS domain 31 139 5.6E-35 T 22-04-2016 IPR013559 YheO-like VP0262 f4391e6104c2106448fbc151e389915d 110 Gene3D G3DSA:3.90.470.10 1 109 4.3E-45 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VP0262 f4391e6104c2106448fbc151e389915d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.699 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VP0262 f4391e6104c2106448fbc151e389915d 110 SUPERFAMILY SSF54843 1 109 9.42E-45 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VP0262 f4391e6104c2106448fbc151e389915d 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 9.1E-36 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VP0262 f4391e6104c2106448fbc151e389915d 110 PANTHER PTHR13501 1 109 2.6E-55 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VP0262 f4391e6104c2106448fbc151e389915d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-50 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VP0262 f4391e6104c2106448fbc151e389915d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2377 868c9f133794b6045181ce4060365783 324 PANTHER PTHR37955:SF1 1 319 9.0E-96 T 22-04-2016 VP2377 868c9f133794b6045181ce4060365783 324 PANTHER PTHR37955 1 319 9.0E-96 T 22-04-2016 VP2377 868c9f133794b6045181ce4060365783 324 Pfam PF03595 Voltage-dependent anion channel 19 306 2.0E-31 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VP1410 ebd1d59205c54053b99e61b274846bea 203 SUPERFAMILY SSF56925 58 164 8.63E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP1410 ebd1d59205c54053b99e61b274846bea 203 Gene3D G3DSA:2.40.160.20 69 148 1.7E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP1295 a98de050763c840ae79404b3c8127f45 257 Gene3D G3DSA:3.30.460.10 104 189 3.8E-5 T 22-04-2016 VP1295 a98de050763c840ae79404b3c8127f45 257 SUPERFAMILY SSF81301 63 215 9.16E-16 T 22-04-2016 VP1972 8d1219cc7bcf0bfefea182cb03561265 98 Gene3D G3DSA:3.30.70.1060 1 98 1.3E-37 T 22-04-2016 VP1972 8d1219cc7bcf0bfefea182cb03561265 98 Pfam PF03795 YCII-related domain 1 95 2.2E-29 T 22-04-2016 IPR005545 YCII-related VP1972 8d1219cc7bcf0bfefea182cb03561265 98 PANTHER PTHR33606 1 98 7.4E-34 T 22-04-2016 VP1972 8d1219cc7bcf0bfefea182cb03561265 98 SUPERFAMILY SSF54909 1 98 2.5E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP2891 949299f4909427106130255e379ea98e 447 PANTHER PTHR11785 1 441 1.1E-284 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP2891 949299f4909427106130255e379ea98e 447 PANTHER PTHR11785:SF332 1 441 1.1E-284 T 22-04-2016 VP2891 949299f4909427106130255e379ea98e 447 PIRSF PIRSF006060 1 446 5.7E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP2891 949299f4909427106130255e379ea98e 447 Pfam PF13520 Amino acid permease 8 421 1.3E-36 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VP0468 3ab4e0a97829270769d5d2ec48000d47 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 6.0E-10 T 22-04-2016 IPR020476 NUDIX hydrolase VP0468 3ab4e0a97829270769d5d2ec48000d47 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 6.0E-10 T 22-04-2016 IPR020476 NUDIX hydrolase VP0468 3ab4e0a97829270769d5d2ec48000d47 132 Pfam PF00293 NUDIX domain 7 125 6.8E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VP0468 3ab4e0a97829270769d5d2ec48000d47 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 1.1E-43 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VP0468 3ab4e0a97829270769d5d2ec48000d47 132 PANTHER PTHR22769:SF36 1 130 1.7E-39 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VP0468 3ab4e0a97829270769d5d2ec48000d47 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VP0468 3ab4e0a97829270769d5d2ec48000d47 132 Gene3D G3DSA:3.90.79.10 3 129 3.1E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP0468 3ab4e0a97829270769d5d2ec48000d47 132 PANTHER PTHR22769 1 130 1.7E-39 T 22-04-2016 VP0468 3ab4e0a97829270769d5d2ec48000d47 132 SUPERFAMILY SSF55811 1 127 1.22E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP0170 887d509487a9266f6585abbf5b0ab4eb 341 PANTHER PTHR30465 1 339 3.6E-122 T 22-04-2016 VP0170 887d509487a9266f6585abbf5b0ab4eb 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 2.4E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0170 887d509487a9266f6585abbf5b0ab4eb 341 PANTHER PTHR30465:SF66 1 339 3.6E-122 T 22-04-2016 VP0170 887d509487a9266f6585abbf5b0ab4eb 341 SUPERFAMILY SSF161098 107 321 3.01E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0170 887d509487a9266f6585abbf5b0ab4eb 341 Gene3D G3DSA:1.10.3720.10 107 328 6.3E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 SUPERFAMILY SSF46785 960 1025 4.15E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 SUPERFAMILY SSF52540 617 929 3.32E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 Pfam PF01580 FtsK/SpoIIIE family 643 856 2.6E-70 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 Pfam PF09397 Ftsk gamma domain 962 1022 7.2E-26 T 22-04-2016 IPR018541 FtsK gamma domain VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 Gene3D G3DSA:3.40.50.300 617 923 4.3E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 PANTHER PTHR22683:SF41 29 1023 0.0 T 22-04-2016 VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 PANTHER PTHR22683 29 1023 0.0 T 22-04-2016 VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 3.3E-41 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region VP1105 c1295a0e0aa9b299d5efb8e14a54170a 1028 SMART SM00843 960 1025 6.8E-38 T 22-04-2016 IPR018541 FtsK gamma domain VP1330 0c27d6334ca4d71f606dd26d4d72136e 333 Gene3D G3DSA:3.10.310.10 154 320 6.2E-67 T 22-04-2016 VP1330 0c27d6334ca4d71f606dd26d4d72136e 333 Gene3D G3DSA:3.10.310.10 3 153 9.7E-67 T 22-04-2016 VP1330 0c27d6334ca4d71f606dd26d4d72136e 333 PIRSF PIRSF029792 1 333 1.9E-139 T 22-04-2016 IPR008794 Proline racemase family VP1330 0c27d6334ca4d71f606dd26d4d72136e 333 PANTHER PTHR33442:SF2 1 333 4.0E-126 T 22-04-2016 VP1330 0c27d6334ca4d71f606dd26d4d72136e 333 SUPERFAMILY SSF54506 3 330 4.26E-119 T 22-04-2016 VP1330 0c27d6334ca4d71f606dd26d4d72136e 333 PANTHER PTHR33442 1 333 4.0E-126 T 22-04-2016 VP1330 0c27d6334ca4d71f606dd26d4d72136e 333 Pfam PF05544 Proline racemase 8 330 8.2E-129 T 22-04-2016 IPR008794 Proline racemase family VP1620 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 130 228 1.1E-13 T 22-04-2016 VP1620 172e9b387d592147d91dc7b91bf389e5 342 SMART SM00062 38 267 2.7E-53 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP1620 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 229 257 4.3E-18 T 22-04-2016 VP1620 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 35 129 4.3E-18 T 22-04-2016 VP1620 172e9b387d592147d91dc7b91bf389e5 342 SUPERFAMILY SSF53850 29 259 1.09E-49 T 22-04-2016 VP1620 172e9b387d592147d91dc7b91bf389e5 342 PANTHER PTHR30085 8 311 6.1E-187 T 22-04-2016 VP1620 172e9b387d592147d91dc7b91bf389e5 342 PANTHER PTHR30085:SF5 8 311 6.1E-187 T 22-04-2016 VP1620 172e9b387d592147d91dc7b91bf389e5 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 8.8E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 Gene3D G3DSA:1.10.3210.10 8 250 6.0E-68 T 22-04-2016 IPR006674 HD domain VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 PANTHER PTHR11373 8 191 2.0E-48 T 22-04-2016 VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 Pfam PF01966 HD domain 62 147 1.1E-7 T 22-04-2016 IPR006674 HD domain VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 Gene3D G3DSA:1.10.3410.10 251 354 5.1E-27 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 1.7E-25 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 SUPERFAMILY SSF109604 19 167 3.52E-79 T 22-04-2016 VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 SUPERFAMILY SSF109604 232 437 3.52E-79 T 22-04-2016 VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 SMART SM00471 58 264 4.0E-8 T 22-04-2016 IPR003607 HD/PDEase domain VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.827 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 Gene3D G3DSA:1.10.3550.10 355 432 4.5E-4 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain VP0925 d3f56744b4c02d806cffa49f1073c7e9 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 1.2E-128 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 VP1138 a21e425e7019f69fad1556f35eb965a5 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.546 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 6.9E-168 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 Gene3D G3DSA:3.40.50.620 236 306 1.8E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1138 a21e425e7019f69fad1556f35eb965a5 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PIRSF PIRSF000099 1 427 2.4E-171 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 Pfam PF00815 Histidinol dehydrogenase 27 424 3.4E-172 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 SUPERFAMILY SSF53720 4 424 2.55E-92 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PANTHER PTHR21256:SF14 1 430 3.6E-292 T 22-04-2016 VP1138 a21e425e7019f69fad1556f35eb965a5 431 Gene3D G3DSA:3.40.50.1980 28 235 7.0E-83 T 22-04-2016 VP1138 a21e425e7019f69fad1556f35eb965a5 431 PANTHER PTHR21256 1 430 3.6E-292 T 22-04-2016 VP2684 90fa95386eb8fdf655aae80988bfa40f 481 SUPERFAMILY SSF111283 18 480 4.05E-128 T 22-04-2016 VP2684 90fa95386eb8fdf655aae80988bfa40f 481 PIRSF PIRSF004919 14 481 9.6E-143 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP2684 90fa95386eb8fdf655aae80988bfa40f 481 PANTHER PTHR30624:SF4 14 481 3.2E-247 T 22-04-2016 VP2684 90fa95386eb8fdf655aae80988bfa40f 481 PANTHER PTHR30624 14 481 3.2E-247 T 22-04-2016 VP2684 90fa95386eb8fdf655aae80988bfa40f 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 5.1E-62 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP0790 d6a45a5c758c9addc834acf104499245 378 SUPERFAMILY SSF64518 1 377 1.31E-95 T 22-04-2016 VP0790 d6a45a5c758c9addc834acf104499245 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.1E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0790 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0790 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0790 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP0790 d6a45a5c758c9addc834acf104499245 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 8.1E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0790 d6a45a5c758c9addc834acf104499245 378 Pfam PF07196 Flagellin hook IN motif 195 249 5.8E-11 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VP0790 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 280 333 1.0E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0790 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 55 171 1.0E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP0790 d6a45a5c758c9addc834acf104499245 378 PANTHER PTHR30244 2 377 4.6E-167 T 22-04-2016 VP0790 d6a45a5c758c9addc834acf104499245 378 PANTHER PTHR30244:SF1 2 377 4.6E-167 T 22-04-2016 VP2259 d6a45a5c758c9addc834acf104499245 378 SUPERFAMILY SSF64518 1 377 1.31E-95 T 22-04-2016 VP2259 d6a45a5c758c9addc834acf104499245 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.1E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2259 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP2259 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP2259 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VP2259 d6a45a5c758c9addc834acf104499245 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 8.1E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2259 d6a45a5c758c9addc834acf104499245 378 Pfam PF07196 Flagellin hook IN motif 195 249 5.8E-11 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VP2259 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 280 333 1.0E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2259 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 55 171 1.0E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VP2259 d6a45a5c758c9addc834acf104499245 378 PANTHER PTHR30244 2 377 4.6E-167 T 22-04-2016 VP2259 d6a45a5c758c9addc834acf104499245 378 PANTHER PTHR30244:SF1 2 377 4.6E-167 T 22-04-2016 VP0008 c213a935e2b26713aaa1a12315ca3f63 248 Gene3D G3DSA:3.40.190.10 101 201 3.0E-29 T 22-04-2016 VP0008 c213a935e2b26713aaa1a12315ca3f63 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 5.0E-56 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0008 c213a935e2b26713aaa1a12315ca3f63 248 SMART SM00062 24 245 6.1E-74 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0008 c213a935e2b26713aaa1a12315ca3f63 248 SUPERFAMILY SSF53850 1 246 3.93E-58 T 22-04-2016 VP0008 c213a935e2b26713aaa1a12315ca3f63 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VP0008 c213a935e2b26713aaa1a12315ca3f63 248 Gene3D G3DSA:3.40.190.10 22 100 3.5E-34 T 22-04-2016 VP0008 c213a935e2b26713aaa1a12315ca3f63 248 Gene3D G3DSA:3.40.190.10 204 247 3.5E-34 T 22-04-2016 VP0008 c213a935e2b26713aaa1a12315ca3f63 248 PANTHER PTHR18966 24 246 1.4E-114 T 22-04-2016 VP0008 c213a935e2b26713aaa1a12315ca3f63 248 PANTHER PTHR18966:SF205 24 246 1.4E-114 T 22-04-2016 VP2924 2e3822f8edb8a3fb7c93648ac256d428 162 SUPERFAMILY SSF160369 4 159 1.12E-44 T 22-04-2016 VP2924 2e3822f8edb8a3fb7c93648ac256d428 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.068 T 22-04-2016 IPR022973 Ribosomal protein L10 VP2924 2e3822f8edb8a3fb7c93648ac256d428 162 PANTHER PTHR11560 1 162 7.2E-55 T 22-04-2016 VP2924 2e3822f8edb8a3fb7c93648ac256d428 162 Pfam PF00466 Ribosomal protein L10 5 101 1.1E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VP1953 0e2f94a738e8fc938397ab1dd7570ab3 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 7.2E-71 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VP1953 0e2f94a738e8fc938397ab1dd7570ab3 206 Gene3D G3DSA:3.90.870.10 2 203 2.8E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VP1953 0e2f94a738e8fc938397ab1dd7570ab3 206 PANTHER PTHR17490:SF7 1 205 7.9E-100 T 22-04-2016 VP1953 0e2f94a738e8fc938397ab1dd7570ab3 206 SUPERFAMILY SSF55821 1 204 7.32E-65 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VP1953 0e2f94a738e8fc938397ab1dd7570ab3 206 PANTHER PTHR17490 1 205 7.9E-100 T 22-04-2016 VP1953 0e2f94a738e8fc938397ab1dd7570ab3 206 Pfam PF01300 Telomere recombination 23 198 8.6E-47 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VP2506 67f846bf3734d4c80489bb4cf3c4e59d 264 Gene3D G3DSA:3.20.20.60 1 262 1.7E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP2506 67f846bf3734d4c80489bb4cf3c4e59d 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 4.2E-114 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VP2506 67f846bf3734d4c80489bb4cf3c4e59d 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 3.8E-108 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VP2506 67f846bf3734d4c80489bb4cf3c4e59d 264 PANTHER PTHR20881:SF3 1 262 9.0E-188 T 22-04-2016 VP2506 67f846bf3734d4c80489bb4cf3c4e59d 264 PANTHER PTHR20881 1 262 9.0E-188 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VP2506 67f846bf3734d4c80489bb4cf3c4e59d 264 SUPERFAMILY SSF51621 3 262 1.26E-105 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP2506 67f846bf3734d4c80489bb4cf3c4e59d 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.345 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VP2506 67f846bf3734d4c80489bb4cf3c4e59d 264 PIRSF PIRSF000388 1 264 1.0E-100 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 3.4E-75 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 PANTHER PTHR10010:SF14 1 225 3.2E-90 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 PANTHER PTHR10010 1 225 3.2E-90 T 22-04-2016 VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 128 210 2.3E-16 T 22-04-2016 IPR026022 PhoU domain VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 23 108 2.9E-23 T 22-04-2016 IPR026022 PhoU domain VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 SUPERFAMILY SSF109755 10 225 1.05E-69 T 22-04-2016 VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 PIRSF PIRSF003107 4 223 6.1E-70 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 124 226 2.9E-30 T 22-04-2016 VP0577 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 6 113 4.8E-38 T 22-04-2016 VP0702 d934821bbfb91a1ecd91c93a3af29b26 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 2.6E-69 T 22-04-2016 IPR009948 Syd GO:0009898 VP0702 d934821bbfb91a1ecd91c93a3af29b26 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.194 T 22-04-2016 IPR009948 Syd GO:0009898 VP2039 31a06dcf68714340bcba44761683ca31 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 7.0E-169 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 Gene3D G3DSA:2.40.33.10 77 170 2.3E-30 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 Gene3D G3DSA:3.20.20.60 6 76 4.2E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP2039 31a06dcf68714340bcba44761683ca31 480 Gene3D G3DSA:3.20.20.60 172 331 4.2E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP2039 31a06dcf68714340bcba44761683ca31 480 SUPERFAMILY SSF52935 329 480 3.27E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 Gene3D G3DSA:3.40.1380.20 332 480 2.1E-38 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 SUPERFAMILY SSF51621 171 344 2.23E-86 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP2039 31a06dcf68714340bcba44761683ca31 480 SUPERFAMILY SSF51621 4 79 2.23E-86 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP2039 31a06dcf68714340bcba44761683ca31 480 PANTHER PTHR11817:SF17 5 480 0.0 T 22-04-2016 VP2039 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 PANTHER PTHR11817 5 480 0.0 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 SUPERFAMILY SSF50800 74 169 2.09E-27 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain VP2039 31a06dcf68714340bcba44761683ca31 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 2.9E-131 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2039 31a06dcf68714340bcba44761683ca31 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 8.5E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VP2256 dded0d14ebb6bc42c9d2252fdd4e4833 670 PANTHER PTHR30288:SF0 1 386 3.9E-95 T 22-04-2016 VP2256 dded0d14ebb6bc42c9d2252fdd4e4833 670 PANTHER PTHR30288:SF0 428 669 3.9E-95 T 22-04-2016 VP2256 dded0d14ebb6bc42c9d2252fdd4e4833 670 PANTHER PTHR30288 1 386 3.9E-95 T 22-04-2016 VP2256 dded0d14ebb6bc42c9d2252fdd4e4833 670 PANTHER PTHR30288 428 669 3.9E-95 T 22-04-2016 VP2256 dded0d14ebb6bc42c9d2252fdd4e4833 670 Pfam PF07196 Flagellin hook IN motif 125 177 3.3E-6 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VP2256 dded0d14ebb6bc42c9d2252fdd4e4833 670 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 7.8E-21 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VP2256 dded0d14ebb6bc42c9d2252fdd4e4833 670 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 435 659 1.0E-57 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 VP1026 c5e3330e54eae203f5010d5194d54799 106 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 22-04-2016 IPR001876 Zinc finger, RanBP2-type GO:0008270 VP1026 c5e3330e54eae203f5010d5194d54799 106 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 4.8E-6 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 VP1055 9e7de9234b8edf03f2690dd794aacc6f 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 3.9E-30 T 22-04-2016 IPR011846 Cyd operon protein YbgE VP1055 9e7de9234b8edf03f2690dd794aacc6f 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 100 2.0E-41 T 22-04-2016 IPR011846 Cyd operon protein YbgE VP3040 fdd1014b4d9e13bc837e21c1fbe466ee 370 PANTHER PTHR32039:SF8 65 369 1.9E-114 T 22-04-2016 VP3040 fdd1014b4d9e13bc837e21c1fbe466ee 370 PANTHER PTHR32039 65 369 1.9E-114 T 22-04-2016 VP3040 fdd1014b4d9e13bc837e21c1fbe466ee 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 289 2.1E-79 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VP3040 fdd1014b4d9e13bc837e21c1fbe466ee 370 Pfam PF02481 DNA recombination-mediator protein A 77 281 6.3E-78 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VP3040 fdd1014b4d9e13bc837e21c1fbe466ee 370 SUPERFAMILY SSF102405 84 291 1.98E-43 T 22-04-2016 VP3040 fdd1014b4d9e13bc837e21c1fbe466ee 370 Gene3D G3DSA:3.40.50.450 116 260 1.4E-12 T 22-04-2016 VP0270 e0ef5f4d50981bb362db9bc1c5633f3f 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 VP0270 e0ef5f4d50981bb362db9bc1c5633f3f 101 SUPERFAMILY SSF57716 2 101 7.06E-37 T 22-04-2016 VP0270 e0ef5f4d50981bb362db9bc1c5633f3f 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.2E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0270 e0ef5f4d50981bb362db9bc1c5633f3f 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid VP0270 e0ef5f4d50981bb362db9bc1c5633f3f 101 PANTHER PTHR19836 1 101 2.4E-59 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0270 e0ef5f4d50981bb362db9bc1c5633f3f 101 Gene3D G3DSA:4.10.830.10 41 101 1.1E-29 T 22-04-2016 VP2016 23160806d3b1a6cb33b19a0467db653f 350 PANTHER PTHR35008:SF4 23 342 2.7E-90 T 22-04-2016 VP2016 23160806d3b1a6cb33b19a0467db653f 350 Gene3D G3DSA:1.10.760.10 49 160 1.6E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2016 23160806d3b1a6cb33b19a0467db653f 350 SUPERFAMILY SSF46626 208 313 2.47E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2016 23160806d3b1a6cb33b19a0467db653f 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 301 8.2E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2016 23160806d3b1a6cb33b19a0467db653f 350 SUPERFAMILY SSF46626 54 164 1.01E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP2016 23160806d3b1a6cb33b19a0467db653f 350 PANTHER PTHR35008 23 342 2.7E-90 T 22-04-2016 VP2016 23160806d3b1a6cb33b19a0467db653f 350 Gene3D G3DSA:1.10.760.10 213 306 1.3E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0831 378e01daad181bacd619d4ad61df577e 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VP0831 378e01daad181bacd619d4ad61df577e 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 2.6E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VP0831 378e01daad181bacd619d4ad61df577e 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 3.9E-207 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VP0831 378e01daad181bacd619d4ad61df577e 523 SUPERFAMILY SSF55604 438 510 2.62E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP0831 378e01daad181bacd619d4ad61df577e 523 PANTHER PTHR30009 265 523 2.8E-238 T 22-04-2016 VP0831 378e01daad181bacd619d4ad61df577e 523 PANTHER PTHR30009 4 249 2.8E-238 T 22-04-2016 VP0831 378e01daad181bacd619d4ad61df577e 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 1.1E-66 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VP0831 378e01daad181bacd619d4ad61df577e 523 Gene3D G3DSA:3.30.1360.60 436 511 5.3E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP0831 378e01daad181bacd619d4ad61df577e 523 PANTHER PTHR30009:SF4 265 523 2.8E-238 T 22-04-2016 VP0831 378e01daad181bacd619d4ad61df577e 523 PANTHER PTHR30009:SF4 4 249 2.8E-238 T 22-04-2016 VP0831 378e01daad181bacd619d4ad61df577e 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 6.6E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP1156 7a0d3ab09183ed77cea07d26122effb0 78 Pfam PF06146 Phosphate-starvation-inducible E 8 68 9.5E-11 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VP1156 7a0d3ab09183ed77cea07d26122effb0 78 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.2E-42 T 22-04-2016 IPR013468 Conserved hypothetical protein CHP02647 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 Pfam PF00664 ABC transporter transmembrane region 25 312 5.2E-30 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 Gene3D G3DSA:3.40.50.300 361 592 3.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1609 e04b03962b2846d183cccb2f2886f9d9 598 Gene3D G3DSA:1.20.1560.10 12 342 7.5E-55 T 22-04-2016 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 SUPERFAMILY SSF52540 356 591 9.4E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1609 e04b03962b2846d183cccb2f2886f9d9 598 PANTHER PTHR24221:SF233 4 60 0.0 T 22-04-2016 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 PANTHER PTHR24221:SF233 78 592 0.0 T 22-04-2016 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 PANTHER PTHR24221 4 60 0.0 T 22-04-2016 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 PANTHER PTHR24221 78 592 0.0 T 22-04-2016 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 SUPERFAMILY SSF90123 12 343 1.7E-57 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 Pfam PF00005 ABC transporter 376 524 2.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1609 e04b03962b2846d183cccb2f2886f9d9 598 SMART SM00382 385 572 3.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2616 404700682873d0032171c14c49a7f42a 237 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 7.8E-38 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2616 404700682873d0032171c14c49a7f42a 237 Gene3D G3DSA:3.20.20.10 1 234 1.7E-94 T 22-04-2016 IPR029066 PLP-binding barrel VP2616 404700682873d0032171c14c49a7f42a 237 PIRSF PIRSF004848 1 236 7.8E-80 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VP2616 404700682873d0032171c14c49a7f42a 237 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VP2616 404700682873d0032171c14c49a7f42a 237 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 2.3E-91 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VP2616 404700682873d0032171c14c49a7f42a 237 PANTHER PTHR10146 1 235 8.1E-112 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VP2616 404700682873d0032171c14c49a7f42a 237 SUPERFAMILY SSF51419 1 228 5.5E-83 T 22-04-2016 IPR029066 PLP-binding barrel VP2677 6b3a7a95985b3c88d9b168f4d18e970f 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 23.06 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VP2677 6b3a7a95985b3c88d9b168f4d18e970f 175 PANTHER PTHR38101 1 174 2.9E-75 T 22-04-2016 VP2677 6b3a7a95985b3c88d9b168f4d18e970f 175 Gene3D G3DSA:1.10.60.30 28 102 4.5E-33 T 22-04-2016 IPR023153 PSPTO4464-like domain VP2677 6b3a7a95985b3c88d9b168f4d18e970f 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 3.7E-56 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VP2677 6b3a7a95985b3c88d9b168f4d18e970f 175 PANTHER PTHR38101:SF1 1 174 2.9E-75 T 22-04-2016 VP2677 6b3a7a95985b3c88d9b168f4d18e970f 175 SUPERFAMILY SSF158710 28 170 1.31E-51 T 22-04-2016 VP2677 6b3a7a95985b3c88d9b168f4d18e970f 175 PIRSF PIRSF016183 1 174 2.0E-72 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VP2677 6b3a7a95985b3c88d9b168f4d18e970f 175 Gene3D G3DSA:1.10.60.30 103 173 1.3E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 SUPERFAMILY SSF51905 272 383 3.78E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 SUPERFAMILY SSF51905 3 175 3.78E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 Pfam PF01494 FAD binding domain 4 340 9.1E-24 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 PANTHER PTHR13789:SF233 3 391 3.2E-204 T 22-04-2016 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 2.6E-108 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 Gene3D G3DSA:3.50.50.60 273 356 8.2E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 Gene3D G3DSA:3.50.50.60 3 180 8.2E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.0E-17 T 22-04-2016 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.0E-17 T 22-04-2016 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 3.0E-17 T 22-04-2016 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 3.0E-17 T 22-04-2016 VP0735 051f3a605a4a1f81b4ac28b24f804e6a 391 PANTHER PTHR13789 3 391 3.2E-204 T 22-04-2016 VP0776 156b2f6369c2564ee5df6ad55360620c 137 PANTHER PTHR30435 1 137 8.9E-65 T 22-04-2016 VP0776 156b2f6369c2564ee5df6ad55360620c 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VP0776 156b2f6369c2564ee5df6ad55360620c 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 2.9E-51 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VP0776 156b2f6369c2564ee5df6ad55360620c 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VP0776 156b2f6369c2564ee5df6ad55360620c 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 135 3.0E-12 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VP0776 156b2f6369c2564ee5df6ad55360620c 137 PANTHER PTHR30435:SF2 1 137 8.9E-65 T 22-04-2016 VP0557 4adbacf0446961f7cea73a59ce36a815 495 SMART SM00062 45 282 1.2E-18 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0557 4adbacf0446961f7cea73a59ce36a815 495 PANTHER PTHR21666 283 452 6.7E-36 T 22-04-2016 VP0557 4adbacf0446961f7cea73a59ce36a815 495 Gene3D G3DSA:1.10.530.10 264 454 1.2E-44 T 22-04-2016 VP0557 4adbacf0446961f7cea73a59ce36a815 495 SUPERFAMILY SSF53850 40 278 8.69E-37 T 22-04-2016 VP0557 4adbacf0446961f7cea73a59ce36a815 495 SUPERFAMILY SSF53955 299 459 2.75E-37 T 22-04-2016 IPR023346 Lysozyme-like domain VP0557 4adbacf0446961f7cea73a59ce36a815 495 Pfam PF01464 Transglycosylase SLT domain 304 417 8.3E-22 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VP0557 4adbacf0446961f7cea73a59ce36a815 495 Gene3D G3DSA:3.40.190.10 124 226 1.0E-9 T 22-04-2016 VP0557 4adbacf0446961f7cea73a59ce36a815 495 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 268 4.0E-27 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VP0557 4adbacf0446961f7cea73a59ce36a815 495 Gene3D G3DSA:3.40.190.10 40 123 8.6E-22 T 22-04-2016 VP0557 4adbacf0446961f7cea73a59ce36a815 495 Gene3D G3DSA:3.40.190.10 236 263 8.6E-22 T 22-04-2016 VP2574 4d62b3354bb86849b80bcb1965781176 597 Pfam PF00679 Elongation factor G C-terminus 399 482 1.0E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2574 4d62b3354bb86849b80bcb1965781176 597 SUPERFAMILY SSF54980 399 493 2.3E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2574 4d62b3354bb86849b80bcb1965781176 597 SUPERFAMILY SSF52540 2 205 2.31E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2574 4d62b3354bb86849b80bcb1965781176 597 PANTHER PTHR23115 397 595 1.6E-276 T 22-04-2016 VP2574 4d62b3354bb86849b80bcb1965781176 597 PANTHER PTHR23115 2 373 1.6E-276 T 22-04-2016 VP2574 4d62b3354bb86849b80bcb1965781176 597 Gene3D G3DSA:3.30.70.870 291 369 8.4E-26 T 22-04-2016 VP2574 4d62b3354bb86849b80bcb1965781176 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VP2574 4d62b3354bb86849b80bcb1965781176 597 Gene3D G3DSA:2.40.30.10 193 289 1.4E-23 T 22-04-2016 VP2574 4d62b3354bb86849b80bcb1965781176 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.453 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 PANTHER PTHR23115:SF175 397 595 1.6E-276 T 22-04-2016 VP2574 4d62b3354bb86849b80bcb1965781176 597 PANTHER PTHR23115:SF175 2 373 1.6E-276 T 22-04-2016 VP2574 4d62b3354bb86849b80bcb1965781176 597 SMART SM00838 398 486 0.0051 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2574 4d62b3354bb86849b80bcb1965781176 597 Gene3D G3DSA:3.40.50.300 2 192 2.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2574 4d62b3354bb86849b80bcb1965781176 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.1E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.3E-300 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.1E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VP2574 4d62b3354bb86849b80bcb1965781176 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 4.0E-52 T 22-04-2016 VP2574 4d62b3354bb86849b80bcb1965781176 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VP2574 4d62b3354bb86849b80bcb1965781176 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 4.5E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal VP2574 4d62b3354bb86849b80bcb1965781176 597 Gene3D G3DSA:3.30.70.240 401 489 3.1E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VP2574 4d62b3354bb86849b80bcb1965781176 597 SUPERFAMILY SSF50447 165 288 1.48E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VP2245 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 PANTHER PTHR38786 1 147 1.7E-37 T 22-04-2016 VP2245 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 Pfam PF02050 Flagellar FliJ protein 17 140 2.8E-30 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VP2245 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.0E-39 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VP2736 063f2a64976f1cdb0f17bf118c512081 254 Gene3D G3DSA:2.40.160.10 39 135 8.4E-4 T 22-04-2016 IPR023614 Porin domain VP2736 063f2a64976f1cdb0f17bf118c512081 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 4.3E-53 T 22-04-2016 IPR007433 Protein of unknown function DUF481 VP2736 063f2a64976f1cdb0f17bf118c512081 254 SUPERFAMILY SSF56935 36 208 6.92E-5 T 22-04-2016 VP0410 6fbb8bf7901dd24093636a555ac906d0 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 1.1E-49 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VP0410 6fbb8bf7901dd24093636a555ac906d0 203 SMART SM01207 10 185 1.5E-82 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VP0410 6fbb8bf7901dd24093636a555ac906d0 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.834 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VP0410 6fbb8bf7901dd24093636a555ac906d0 203 PANTHER PTHR30309:SF0 1 202 1.2E-90 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VP0410 6fbb8bf7901dd24093636a555ac906d0 203 PANTHER PTHR30309 1 202 1.2E-90 T 22-04-2016 VP0410 6fbb8bf7901dd24093636a555ac906d0 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 3.8E-73 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VP1907 0f95ee8992198958ee0e434027c8c28d 212 SUPERFAMILY SSF46894 141 211 2.01E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP1907 0f95ee8992198958ee0e434027c8c28d 212 SMART SM00448 5 118 1.7E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1907 0f95ee8992198958ee0e434027c8c28d 212 SMART SM00421 148 205 4.0E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1907 0f95ee8992198958ee0e434027c8c28d 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 2.2E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1907 0f95ee8992198958ee0e434027c8c28d 212 PANTHER PTHR26402:SF151 5 210 4.6E-78 T 22-04-2016 VP1907 0f95ee8992198958ee0e434027c8c28d 212 Pfam PF00072 Response regulator receiver domain 7 119 4.4E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1907 0f95ee8992198958ee0e434027c8c28d 212 Gene3D G3DSA:3.40.50.2300 2 124 7.9E-36 T 22-04-2016 VP1907 0f95ee8992198958ee0e434027c8c28d 212 PANTHER PTHR26402 5 210 4.6E-78 T 22-04-2016 VP1907 0f95ee8992198958ee0e434027c8c28d 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1907 0f95ee8992198958ee0e434027c8c28d 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1907 0f95ee8992198958ee0e434027c8c28d 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1907 0f95ee8992198958ee0e434027c8c28d 212 Gene3D G3DSA:1.10.10.10 125 211 6.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1907 0f95ee8992198958ee0e434027c8c28d 212 SUPERFAMILY SSF52172 4 135 8.54E-35 T 22-04-2016 IPR011006 CheY-like superfamily VP1907 0f95ee8992198958ee0e434027c8c28d 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VP1832 69879f0989ec2410f5468a52a496df1f 158 SUPERFAMILY SSF55729 2 148 6.05E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1832 69879f0989ec2410f5468a52a496df1f 158 Gene3D G3DSA:3.40.630.30 2 149 2.0E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1832 69879f0989ec2410f5468a52a496df1f 158 PANTHER PTHR13256 1 148 3.5E-32 T 22-04-2016 VP1832 69879f0989ec2410f5468a52a496df1f 158 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 1.0E-28 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2283 9d53c7e34289cbe9ae306640d701d50d 417 PANTHER PTHR11119:SF49 1 414 1.2E-172 T 22-04-2016 VP2283 9d53c7e34289cbe9ae306640d701d50d 417 Pfam PF00860 Permease family 3 371 3.0E-91 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP2283 9d53c7e34289cbe9ae306640d701d50d 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 1.1E-110 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VP2283 9d53c7e34289cbe9ae306640d701d50d 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VP2283 9d53c7e34289cbe9ae306640d701d50d 417 PANTHER PTHR11119 1 414 1.2E-172 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP2647 7d6e8bff9f733b204568ca538be46ccd 134 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 2.4E-20 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VP2647 7d6e8bff9f733b204568ca538be46ccd 134 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.7E-20 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VP2732 356c74df6dfe2892c277d78f6252cb72 139 PIRSF PIRSF004681 1 139 3.5E-45 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VP2732 356c74df6dfe2892c277d78f6252cb72 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 2.7E-44 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VP2732 356c74df6dfe2892c277d78f6252cb72 139 Gene3D G3DSA:2.60.120.460 1 139 3.2E-58 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VP2732 356c74df6dfe2892c277d78f6252cb72 139 PANTHER PTHR30615 1 139 2.8E-78 T 22-04-2016 VP2732 356c74df6dfe2892c277d78f6252cb72 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 8.1E-39 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VP2732 356c74df6dfe2892c277d78f6252cb72 139 PANTHER PTHR30615:SF5 1 139 2.8E-78 T 22-04-2016 VP2732 356c74df6dfe2892c277d78f6252cb72 139 SUPERFAMILY SSF111038 1 139 1.29E-48 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VP2732 356c74df6dfe2892c277d78f6252cb72 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VP0059 3b751134119be0803749f4b17bea8ed6 311 Pfam PF03466 LysR substrate binding domain 95 255 4.8E-11 T 22-04-2016 IPR005119 LysR, substrate-binding VP0059 3b751134119be0803749f4b17bea8ed6 311 SUPERFAMILY SSF46785 7 88 4.69E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0059 3b751134119be0803749f4b17bea8ed6 311 PANTHER PTHR30118 1 266 8.1E-36 T 22-04-2016 VP0059 3b751134119be0803749f4b17bea8ed6 311 Gene3D G3DSA:1.10.10.10 3 88 1.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0059 3b751134119be0803749f4b17bea8ed6 311 Gene3D G3DSA:3.40.190.10 92 210 2.4E-10 T 22-04-2016 VP0059 3b751134119be0803749f4b17bea8ed6 311 SUPERFAMILY SSF53850 92 300 3.26E-18 T 22-04-2016 VP0059 3b751134119be0803749f4b17bea8ed6 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1209 ad327bc8b4fabe66da4fe4f96d17940a 171 SUPERFAMILY SSF55729 1 152 5.15E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1209 ad327bc8b4fabe66da4fe4f96d17940a 171 PANTHER PTHR23091:SF274 1 151 4.4E-19 T 22-04-2016 VP1209 ad327bc8b4fabe66da4fe4f96d17940a 171 Gene3D G3DSA:3.40.630.30 1 160 6.0E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1209 ad327bc8b4fabe66da4fe4f96d17940a 171 Pfam PF00583 Acetyltransferase (GNAT) family 64 143 7.3E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP1209 ad327bc8b4fabe66da4fe4f96d17940a 171 PANTHER PTHR23091 1 151 4.4E-19 T 22-04-2016 VP0888 cef7cb2b0d6fe3c51f210930f77da530 148 PANTHER PTHR31793 19 140 1.6E-26 T 22-04-2016 VP0888 cef7cb2b0d6fe3c51f210930f77da530 148 Pfam PF13279 Thioesterase-like superfamily 19 124 4.6E-12 T 22-04-2016 VP0888 cef7cb2b0d6fe3c51f210930f77da530 148 SUPERFAMILY SSF54637 10 143 2.37E-30 T 22-04-2016 IPR029069 HotDog domain VP0888 cef7cb2b0d6fe3c51f210930f77da530 148 PANTHER PTHR31793:SF9 19 140 1.6E-26 T 22-04-2016 VP0888 cef7cb2b0d6fe3c51f210930f77da530 148 Gene3D G3DSA:3.10.129.10 13 137 4.9E-34 T 22-04-2016 IPR029069 HotDog domain VP2935 3bb12651b423c8f51990b5723f7c4c2c 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 1.9E-17 T 22-04-2016 IPR000504 RNA recognition motif domain GO:0003676 VP2935 3bb12651b423c8f51990b5723f7c4c2c 151 Gene3D G3DSA:3.30.70.330 47 141 2.6E-27 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VP2935 3bb12651b423c8f51990b5723f7c4c2c 151 SUPERFAMILY SSF54928 47 141 2.42E-27 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VP2935 3bb12651b423c8f51990b5723f7c4c2c 151 SMART SM00360 63 135 2.1E-20 T 22-04-2016 IPR000504 RNA recognition motif domain GO:0003676 VP2935 3bb12651b423c8f51990b5723f7c4c2c 151 PANTHER PTHR24012 53 140 1.2E-22 T 22-04-2016 VP2231 d0d6e1636940bd3208d754fba2c0513d 126 SMART SM00448 5 119 1.6E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2231 d0d6e1636940bd3208d754fba2c0513d 126 Pfam PF00072 Response regulator receiver domain 7 119 2.0E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP2231 d0d6e1636940bd3208d754fba2c0513d 126 PANTHER PTHR26402 5 125 2.8E-43 T 22-04-2016 VP2231 d0d6e1636940bd3208d754fba2c0513d 126 Gene3D G3DSA:3.40.50.2300 3 125 4.4E-40 T 22-04-2016 VP2231 d0d6e1636940bd3208d754fba2c0513d 126 SUPERFAMILY SSF52172 3 125 1.99E-38 T 22-04-2016 IPR011006 CheY-like superfamily VP1920 18a306282d1e39ae24c6849734dd6527 429 Pfam PF09375 Imelysin 49 406 4.0E-98 T 22-04-2016 VP3006 cf46bfa7935d354c12224b30a5e2393e 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 1.3E-38 T 22-04-2016 IPR022080 Protein of unknown function DUF3630 VP0376 204316c19243cb009d08afd7d6556868 250 Pfam PF00563 EAL domain 22 232 3.7E-22 T 22-04-2016 IPR001633 EAL domain VP0376 204316c19243cb009d08afd7d6556868 250 Gene3D G3DSA:3.20.20.450 22 234 1.7E-17 T 22-04-2016 IPR001633 EAL domain VP0376 204316c19243cb009d08afd7d6556868 250 SUPERFAMILY SSF141868 23 235 1.27E-25 T 22-04-2016 IPR001633 EAL domain VP0376 204316c19243cb009d08afd7d6556868 250 SMART SM00052 10 237 4.3E-6 T 22-04-2016 IPR001633 EAL domain VP1359 8af2bf22163f603099c6a082811f24d2 287 Gene3D G3DSA:2.40.50.100 151 184 4.4E-21 T 22-04-2016 VP1359 8af2bf22163f603099c6a082811f24d2 287 Gene3D G3DSA:2.40.50.100 42 74 4.4E-21 T 22-04-2016 VP1359 8af2bf22163f603099c6a082811f24d2 287 PANTHER PTHR30367 4 284 2.1E-79 T 22-04-2016 VP1359 8af2bf22163f603099c6a082811f24d2 287 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 227 3.1E-38 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VP1359 8af2bf22163f603099c6a082811f24d2 287 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 228 1.6E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VP1359 8af2bf22163f603099c6a082811f24d2 287 SUPERFAMILY SSF111369 37 237 1.83E-27 T 22-04-2016 VP1359 8af2bf22163f603099c6a082811f24d2 287 PANTHER PTHR30367:SF5 4 284 2.1E-79 T 22-04-2016 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 Pfam PF13432 Tetratricopeptide repeat 189 247 0.0019 T 22-04-2016 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 Gene3D G3DSA:1.25.40.10 44 325 2.9E-40 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 SUPERFAMILY SSF48452 46 323 8.22E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 SMART SM00028 278 311 9.3E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 SMART SM00028 85 118 2.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 SMART SM00028 214 247 0.014 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 SMART SM00028 180 213 6.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 SMART SM00028 119 152 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 Pfam PF13181 Tetratricopeptide repeat 87 118 0.12 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 Pfam PF07719 Tetratricopeptide repeat 278 310 2.8E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 PANTHER PTHR23083 175 313 9.2E-33 T 22-04-2016 VP2409 b97edc7a18a923b27a64031a3b1f0f60 338 PANTHER PTHR23083 55 147 9.2E-33 T 22-04-2016 VP1141 4d998f35ac8e67bf25053d417e864caa 204 PANTHER PTHR21235:SF1 6 203 3.1E-82 T 22-04-2016 VP1141 4d998f35ac8e67bf25053d417e864caa 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.635 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VP1141 4d998f35ac8e67bf25053d417e864caa 204 PIRSF PIRSF000495 4 204 1.5E-64 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VP1141 4d998f35ac8e67bf25053d417e864caa 204 SUPERFAMILY SSF52317 5 203 6.42E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1141 4d998f35ac8e67bf25053d417e864caa 204 PANTHER PTHR21235 6 203 3.1E-82 T 22-04-2016 VP1141 4d998f35ac8e67bf25053d417e864caa 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 8.8E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VP1141 4d998f35ac8e67bf25053d417e864caa 204 Gene3D G3DSA:3.40.50.880 3 204 8.4E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1141 4d998f35ac8e67bf25053d417e864caa 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 1.1E-68 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 9.3E-11 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 Gene3D G3DSA:2.40.50.140 988 1076 3.0E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2303 d1575a0712496ad757ba1c9317f7a651 1159 SMART SM00481 7 74 3.4E-25 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 8.0E-26 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 PANTHER PTHR32294 2 1159 0.0 T 22-04-2016 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 Pfam PF02811 PHP domain 8 172 5.6E-43 T 22-04-2016 IPR004013 PHP domain GO:0003824 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 Gene3D G3DSA:3.20.20.140 5 256 1.5E-19 T 22-04-2016 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 SUPERFAMILY SSF89550 5 263 1.22E-12 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.4E-174 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 Gene3D G3DSA:1.10.150.280 824 882 1.9E-6 T 22-04-2016 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 PANTHER PTHR32294:SF0 2 1159 0.0 T 22-04-2016 VP2303 d1575a0712496ad757ba1c9317f7a651 1159 SUPERFAMILY SSF50249 976 1064 2.4E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1786 2248f4828265fd522925a456eeaedf9d 90 SUPERFAMILY SSF54593 2 85 2.91E-7 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP1786 2248f4828265fd522925a456eeaedf9d 90 Gene3D G3DSA:3.10.180.10 2 87 5.4E-10 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP0916 f26a12b38c3490a805c2e33a45c921d0 434 PIRSF PIRSF003095 1 434 7.4E-130 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.3E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 PANTHER PTHR30560 1 430 3.8E-141 T 22-04-2016 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF102735 1 130 3.01E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.3E-42 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:3.30.70.1050 1 118 1.6E-40 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF54534 90 241 7.46E-37 T 22-04-2016 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 9.0E-41 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF109998 248 429 1.08E-49 T 22-04-2016 IPR027304 Trigger factor/SurA domain VP0916 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:3.10.50.40 155 215 4.1E-9 T 22-04-2016 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 2.0E-143 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 PANTHER PTHR30560:SF3 1 430 3.8E-141 T 22-04-2016 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:1.10.3120.10 216 388 1.0E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VP0916 f26a12b38c3490a805c2e33a45c921d0 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.954 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PANTHER PTHR30012:SF6 2 404 5.9E-247 T 22-04-2016 VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 7.3E-37 T 22-04-2016 IPR003004 GspF/PilC family VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 7.3E-37 T 22-04-2016 IPR003004 GspF/PilC family VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 7.3E-37 T 22-04-2016 IPR003004 GspF/PilC family VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 7.3E-37 T 22-04-2016 IPR003004 GspF/PilC family VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PANTHER PTHR30012 2 404 5.9E-247 T 22-04-2016 VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 1.5E-153 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.1E-34 T 22-04-2016 IPR018076 Type II secretion system F domain VP0135 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.7E-24 T 22-04-2016 IPR018076 Type II secretion system F domain VPA1279 1fecd856de4b0e8fe3ff5517b9b04e3c 118 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 1 91 9.2E-25 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPA1279 1fecd856de4b0e8fe3ff5517b9b04e3c 118 Gene3D G3DSA:3.30.930.10 1 118 1.4E-47 T 22-04-2016 VPA1279 1fecd856de4b0e8fe3ff5517b9b04e3c 118 PANTHER PTHR11451:SF31 1 118 2.3E-65 T 22-04-2016 VPA1279 1fecd856de4b0e8fe3ff5517b9b04e3c 118 PANTHER PTHR11451 1 118 2.3E-65 T 22-04-2016 VPA1279 1fecd856de4b0e8fe3ff5517b9b04e3c 118 SUPERFAMILY SSF55681 1 117 2.26E-37 T 22-04-2016 VP0265 d5416c7f0eac08b463d8687425d13580 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0265 d5416c7f0eac08b463d8687425d13580 63 Gene3D G3DSA:1.10.287.310 1 60 1.2E-29 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0265 d5416c7f0eac08b463d8687425d13580 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0265 d5416c7f0eac08b463d8687425d13580 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.4E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0265 d5416c7f0eac08b463d8687425d13580 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.3E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0265 d5416c7f0eac08b463d8687425d13580 63 SUPERFAMILY SSF46561 1 61 2.22E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0265 d5416c7f0eac08b463d8687425d13580 63 PANTHER PTHR10916 1 63 4.1E-31 T 22-04-2016 VP0614 f6f5f9c30adf03e1bd85e7665dcb68f9 74 Pfam PF07191 zinc-ribbons 5 68 6.2E-27 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 VP0614 f6f5f9c30adf03e1bd85e7665dcb68f9 74 SUPERFAMILY SSF161187 3 70 1.31E-26 T 22-04-2016 IPR029037 YfgJ-like VP0614 f6f5f9c30adf03e1bd85e7665dcb68f9 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 2.0E-31 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 VP0614 f6f5f9c30adf03e1bd85e7665dcb68f9 74 Gene3D G3DSA:2.10.290.10 3 71 8.1E-29 T 22-04-2016 IPR029037 YfgJ-like VP2786 c7e0146ae2c109d4fedcc04e331b56ba 197 SUPERFAMILY SSF52218 10 184 1.37E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2786 c7e0146ae2c109d4fedcc04e331b56ba 197 Gene3D G3DSA:3.40.50.360 10 186 4.5E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2786 c7e0146ae2c109d4fedcc04e331b56ba 197 PANTHER PTHR10204 9 189 3.7E-73 T 22-04-2016 VP2786 c7e0146ae2c109d4fedcc04e331b56ba 197 PANTHER PTHR10204:SF42 9 189 3.7E-73 T 22-04-2016 VP2786 c7e0146ae2c109d4fedcc04e331b56ba 197 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 191 49.725 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VP2786 c7e0146ae2c109d4fedcc04e331b56ba 197 Pfam PF02525 Flavodoxin-like fold 10 176 9.9E-42 T 22-04-2016 IPR003680 Flavodoxin-like fold VP0718 66e1d0bf8c501313dd8b653cc1aa075d 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.375 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 VP0718 66e1d0bf8c501313dd8b653cc1aa075d 92 Gene3D G3DSA:3.30.70.1460 8 92 3.2E-36 T 22-04-2016 IPR027471 YbeD-like domain VP0718 66e1d0bf8c501313dd8b653cc1aa075d 92 SUPERFAMILY SSF117991 7 92 3.66E-31 T 22-04-2016 IPR027471 YbeD-like domain VP0718 66e1d0bf8c501313dd8b653cc1aa075d 92 PANTHER PTHR38036 4 92 1.5E-42 T 22-04-2016 VP0718 66e1d0bf8c501313dd8b653cc1aa075d 92 PANTHER PTHR38036:SF1 4 92 1.5E-42 T 22-04-2016 VP0718 66e1d0bf8c501313dd8b653cc1aa075d 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 1.8E-29 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 VP1271 2202541f5ccf074bf9f0ca64782a5a08 153 PANTHER PTHR12714 8 153 1.3E-16 T 22-04-2016 VP1271 2202541f5ccf074bf9f0ca64782a5a08 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 2.0E-20 T 22-04-2016 VP1271 2202541f5ccf074bf9f0ca64782a5a08 153 PANTHER PTHR12714:SF7 8 153 1.3E-16 T 22-04-2016 VP1271 2202541f5ccf074bf9f0ca64782a5a08 153 Pfam PF04191 Phospholipid methyltransferase 40 142 1.2E-12 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 VP2914 030e3229d46e64489a7c28e2580f498c 307 SUPERFAMILY SSF52283 25 120 2.32E-7 T 22-04-2016 VP2914 030e3229d46e64489a7c28e2580f498c 307 PANTHER PTHR10996 1 304 7.1E-119 T 22-04-2016 VP2914 030e3229d46e64489a7c28e2580f498c 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 3.5E-49 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VP2914 030e3229d46e64489a7c28e2580f498c 307 SUPERFAMILY SSF51735 93 273 5.71E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2914 030e3229d46e64489a7c28e2580f498c 307 Gene3D G3DSA:3.40.50.720 91 272 7.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2914 030e3229d46e64489a7c28e2580f498c 307 PANTHER PTHR10996:SF148 1 304 7.1E-119 T 22-04-2016 VP2394 35b523f559c52b441d9c6f61661ec3fb 462 PANTHER PTHR11328:SF35 1 446 1.4E-217 T 22-04-2016 VP2394 35b523f559c52b441d9c6f61661ec3fb 462 PANTHER PTHR11328 1 446 1.4E-217 T 22-04-2016 VP2394 35b523f559c52b441d9c6f61661ec3fb 462 Gene3D G3DSA:1.20.1250.20 228 428 4.5E-11 T 22-04-2016 VP2394 35b523f559c52b441d9c6f61661ec3fb 462 Gene3D G3DSA:1.20.1250.20 10 199 6.6E-8 T 22-04-2016 VP2394 35b523f559c52b441d9c6f61661ec3fb 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 442 4.0E-107 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 VP2394 35b523f559c52b441d9c6f61661ec3fb 462 SUPERFAMILY SSF103473 10 425 6.19E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP2394 35b523f559c52b441d9c6f61661ec3fb 462 Pfam PF13347 MFS/sugar transport protein 19 430 2.1E-80 T 22-04-2016 VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 SMART SM00382 43 241 7.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.1E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 Pfam PF00005 ABC transporter 35 192 5.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 PANTHER PTHR24220 11 328 2.7E-115 T 22-04-2016 VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 SUPERFAMILY SSF52540 10 262 6.14E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 PANTHER PTHR24220:SF81 11 328 2.7E-115 T 22-04-2016 VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 Gene3D G3DSA:3.40.50.300 9 265 4.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2483 400bf75ecd3a947143e9902b6b3b4e4d 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.1E-22 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP2191 2667e1ee3bd75e654dac248c1bb7a41d 1380 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 142 4.3E-25 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal VP2191 2667e1ee3bd75e654dac248c1bb7a41d 1380 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1335 1376 3.9E-14 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal VP0303 5df74fec23ba084e9d7c6c78e597d233 99 Pfam PF10795 Protein of unknown function (DUF2607) 3 97 8.4E-37 T 22-04-2016 IPR019731 Protein of unknown function DUF2607 VP0994 e43e551ddd233f7ae97620a55caf641f 758 SUPERFAMILY SSF51998 4 757 3.89E-290 T 22-04-2016 VP0994 e43e551ddd233f7ae97620a55caf641f 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 VP0994 e43e551ddd233f7ae97620a55caf641f 758 PIRSF PIRSF000379 5 758 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 VP0994 e43e551ddd233f7ae97620a55caf641f 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VP0994 e43e551ddd233f7ae97620a55caf641f 758 PANTHER PTHR30191 1 758 0.0 T 22-04-2016 VP0994 e43e551ddd233f7ae97620a55caf641f 758 Gene3D G3DSA:3.20.70.20 3 757 0.0 T 22-04-2016 VP0994 e43e551ddd233f7ae97620a55caf641f 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 9.1E-207 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 VP0994 e43e551ddd233f7ae97620a55caf641f 758 PANTHER PTHR30191:SF0 1 758 0.0 T 22-04-2016 VP0994 e43e551ddd233f7ae97620a55caf641f 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VP2282 a84054898722fd1e7bdc76dc9e127aa9 400 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 1.2E-68 T 22-04-2016 IPR018642 Protein of unknown function DUF2066 VP1415 de8e452b8ac09029b485560171a0be75 734 Pfam PF13665 Domain of unknown function (DUF4150) 38 143 3.2E-34 T 22-04-2016 IPR025425 Domain of unknown function DUF4150 VP1415 de8e452b8ac09029b485560171a0be75 734 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 546 666 9.1E-20 T 22-04-2016 IPR032871 AHH domain-containing protein VP2785 171883e0384a378f48ce6f75abded800 598 Gene3D G3DSA:3.40.50.720 397 530 1.7E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2785 171883e0384a378f48ce6f75abded800 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 8.4E-67 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VP2785 171883e0384a378f48ce6f75abded800 598 PANTHER PTHR16254 1 556 9.8E-242 T 22-04-2016 VP2785 171883e0384a378f48ce6f75abded800 598 PANTHER PTHR16254:SF6 1 556 9.8E-242 T 22-04-2016 VP2785 171883e0384a378f48ce6f75abded800 598 SUPERFAMILY SSF51735 401 528 7.8E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2785 171883e0384a378f48ce6f75abded800 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 2.6E-81 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VP2785 171883e0384a378f48ce6f75abded800 598 Pfam PF02254 TrkA-N domain 402 512 2.6E-22 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VP2785 171883e0384a378f48ce6f75abded800 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.567 T 22-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VP2785 171883e0384a378f48ce6f75abded800 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.2E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP2785 171883e0384a378f48ce6f75abded800 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.2E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP2785 171883e0384a378f48ce6f75abded800 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.2E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP2785 171883e0384a378f48ce6f75abded800 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.2E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VP2031 e293a118f0e9e48c17e1f0e944fb48d6 226 PANTHER PTHR21299 6 225 3.5E-80 T 22-04-2016 VP2031 e293a118f0e9e48c17e1f0e944fb48d6 226 Pfam PF02224 Cytidylate kinase 8 221 3.8E-78 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VP2031 e293a118f0e9e48c17e1f0e944fb48d6 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.458 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VP2031 e293a118f0e9e48c17e1f0e944fb48d6 226 Gene3D G3DSA:3.40.50.300 5 221 2.0E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2031 e293a118f0e9e48c17e1f0e944fb48d6 226 SUPERFAMILY SSF52540 6 223 1.86E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2031 e293a118f0e9e48c17e1f0e944fb48d6 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 3.5E-85 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VP2718 269220959bf36ebeac4a24423f97314c 444 PANTHER PTHR10110 8 443 1.7E-99 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 VP2718 269220959bf36ebeac4a24423f97314c 444 PANTHER PTHR10110:SF86 8 443 1.7E-99 T 22-04-2016 VP2718 269220959bf36ebeac4a24423f97314c 444 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 1.5E-54 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VP0585 2861b4b0dae83798aa59fa43cf4193cc 152 Pfam PF00571 CBS domain 4 58 2.1E-12 T 22-04-2016 IPR000644 CBS domain VP0585 2861b4b0dae83798aa59fa43cf4193cc 152 Pfam PF00571 CBS domain 79 127 3.2E-8 T 22-04-2016 IPR000644 CBS domain VP0585 2861b4b0dae83798aa59fa43cf4193cc 152 PANTHER PTHR11911:SF90 1 139 6.1E-39 T 22-04-2016 VP0585 2861b4b0dae83798aa59fa43cf4193cc 152 Gene3D G3DSA:3.20.20.70 3 130 2.6E-29 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP0585 2861b4b0dae83798aa59fa43cf4193cc 152 PANTHER PTHR11911 1 139 6.1E-39 T 22-04-2016 VP0585 2861b4b0dae83798aa59fa43cf4193cc 152 SMART SM00116 84 131 1.3E-5 T 22-04-2016 IPR000644 CBS domain VP0585 2861b4b0dae83798aa59fa43cf4193cc 152 SMART SM00116 11 59 7.4E-9 T 22-04-2016 IPR000644 CBS domain VP0585 2861b4b0dae83798aa59fa43cf4193cc 152 SUPERFAMILY SSF54631 1 132 1.07E-31 T 22-04-2016 VP0993 0831d5f71c7cffa61d37720793442bef 328 Gene3D G3DSA:2.40.128.140 12 325 3.0E-97 T 22-04-2016 VP0993 0831d5f71c7cffa61d37720793442bef 328 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 31 325 3.9E-83 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 VP1129 3ae67c425a3ec3d5b97aa73ad881039b 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 7.0E-107 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VP1129 3ae67c425a3ec3d5b97aa73ad881039b 205 Gene3D G3DSA:1.10.3890.10 2 205 7.8E-88 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VP1129 3ae67c425a3ec3d5b97aa73ad881039b 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.6E-76 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VP1129 3ae67c425a3ec3d5b97aa73ad881039b 205 PANTHER PTHR38100 2 205 3.7E-95 T 22-04-2016 VP1129 3ae67c425a3ec3d5b97aa73ad881039b 205 PANTHER PTHR38100:SF1 2 205 3.7E-95 T 22-04-2016 VP1129 3ae67c425a3ec3d5b97aa73ad881039b 205 SUPERFAMILY SSF101322 2 204 6.54E-80 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VP1129 3ae67c425a3ec3d5b97aa73ad881039b 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.816 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VP0636 d05574544bb945e73ce56d63d055bf75 187 Gene3D G3DSA:2.40.160.20 17 187 1.7E-36 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0636 d05574544bb945e73ce56d63d055bf75 187 SUPERFAMILY SSF56925 28 187 4.19E-31 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0636 d05574544bb945e73ce56d63d055bf75 187 Pfam PF13505 Outer membrane protein beta-barrel domain 11 187 3.0E-25 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VP2720 155943c2e62ade5f908424f332711afb 259 PANTHER PTHR23293 22 256 1.1E-93 T 22-04-2016 VP2720 155943c2e62ade5f908424f332711afb 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 6.4E-50 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VP2720 155943c2e62ade5f908424f332711afb 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 7.1E-87 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VP2720 155943c2e62ade5f908424f332711afb 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 4.1E-91 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VP2720 155943c2e62ade5f908424f332711afb 259 SUPERFAMILY SSF52402 26 213 4.06E-56 T 22-04-2016 VP2720 155943c2e62ade5f908424f332711afb 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.677 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VP2720 155943c2e62ade5f908424f332711afb 259 PANTHER PTHR23293:SF5 22 256 1.1E-93 T 22-04-2016 VP2720 155943c2e62ade5f908424f332711afb 259 PIRSF PIRSF000857 6 253 4.6E-56 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VP2720 155943c2e62ade5f908424f332711afb 259 Gene3D G3DSA:3.40.50.620 15 221 4.0E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0706 f03726e36f905d5ccae9c791685d04ca 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.1E-198 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VP0706 f03726e36f905d5ccae9c791685d04ca 344 SMART SM00382 30 235 7.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0706 f03726e36f905d5ccae9c791685d04ca 344 PANTHER PTHR24220:SF455 3 332 1.6E-177 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 VP0706 f03726e36f905d5ccae9c791685d04ca 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0706 f03726e36f905d5ccae9c791685d04ca 344 SUPERFAMILY SSF52540 1 239 3.38E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0706 f03726e36f905d5ccae9c791685d04ca 344 Gene3D G3DSA:3.40.50.300 1 236 4.9E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0706 f03726e36f905d5ccae9c791685d04ca 344 SUPERFAMILY SSF55021 248 343 1.26E-25 T 22-04-2016 VP0706 f03726e36f905d5ccae9c791685d04ca 344 SMART SM00930 265 340 9.3E-27 T 22-04-2016 IPR018449 NIL domain VP0706 f03726e36f905d5ccae9c791685d04ca 344 PANTHER PTHR24220 3 332 1.6E-177 T 22-04-2016 VP0706 f03726e36f905d5ccae9c791685d04ca 344 Pfam PF09383 NIL domain 268 339 2.2E-20 T 22-04-2016 IPR018449 NIL domain VP0706 f03726e36f905d5ccae9c791685d04ca 344 Gene3D G3DSA:3.30.70.260 237 343 5.5E-32 T 22-04-2016 VP0706 f03726e36f905d5ccae9c791685d04ca 344 Pfam PF00005 ABC transporter 21 169 1.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 Gene3D G3DSA:3.40.50.970 359 558 3.3E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 Gene3D G3DSA:3.40.50.1220 192 358 3.7E-66 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 SUPERFAMILY SSF52518 372 567 3.99E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 PANTHER PTHR18968 4 574 0.0 T 22-04-2016 VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 6.0E-47 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 Gene3D G3DSA:3.40.50.970 4 179 4.4E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 6.4E-273 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 SUPERFAMILY SSF52467 191 364 8.66E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 1.8E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.9E-50 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 SUPERFAMILY SSF52518 2 181 8.84E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VP0352 f5be17f24b83545ccb7b12f1a776b4ee 574 PANTHER PTHR18968:SF116 4 574 0.0 T 22-04-2016 VP0145 5206b0fd408fb81a93c42fe911e01a7d 189 Gene3D G3DSA:3.90.79.10 8 183 8.5E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP0145 5206b0fd408fb81a93c42fe911e01a7d 189 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VP0145 5206b0fd408fb81a93c42fe911e01a7d 189 PANTHER PTHR11839:SF12 1 176 1.0E-93 T 22-04-2016 VP0145 5206b0fd408fb81a93c42fe911e01a7d 189 PANTHER PTHR11839 1 176 1.0E-93 T 22-04-2016 VP0145 5206b0fd408fb81a93c42fe911e01a7d 189 SUPERFAMILY SSF55811 4 181 1.03E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP0145 5206b0fd408fb81a93c42fe911e01a7d 189 Pfam PF00293 NUDIX domain 46 154 1.1E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VP1483 f47406e902a83c8ed02469fdad7eb20a 320 PANTHER PTHR10799 1 69 5.6E-30 T 22-04-2016 VP1483 f47406e902a83c8ed02469fdad7eb20a 320 PANTHER PTHR10799 189 312 5.6E-30 T 22-04-2016 VP1483 f47406e902a83c8ed02469fdad7eb20a 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 316 1.6E-53 T 22-04-2016 IPR000160 GGDEF domain VP1483 f47406e902a83c8ed02469fdad7eb20a 320 SUPERFAMILY SSF55073 161 317 7.53E-50 T 22-04-2016 IPR029787 Nucleotide cyclase VP1483 f47406e902a83c8ed02469fdad7eb20a 320 Gene3D G3DSA:3.30.450.20 15 129 4.2E-10 T 22-04-2016 VP1483 f47406e902a83c8ed02469fdad7eb20a 320 SUPERFAMILY SSF55785 13 93 5.58E-8 T 22-04-2016 IPR000014 PAS domain VP1483 f47406e902a83c8ed02469fdad7eb20a 320 PANTHER PTHR10799:SF750 1 69 5.6E-30 T 22-04-2016 VP1483 f47406e902a83c8ed02469fdad7eb20a 320 PANTHER PTHR10799:SF750 189 312 5.6E-30 T 22-04-2016 VP1483 f47406e902a83c8ed02469fdad7eb20a 320 SMART SM00267 145 317 1.8E-57 T 22-04-2016 IPR000160 GGDEF domain VP1483 f47406e902a83c8ed02469fdad7eb20a 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 3.3E-43 T 22-04-2016 IPR000160 GGDEF domain VP1483 f47406e902a83c8ed02469fdad7eb20a 320 Gene3D G3DSA:3.30.70.270 158 317 5.3E-52 T 22-04-2016 VP2703 6e97393ec6b725ef58c95060dbb5a482 281 PANTHER PTHR35894 2 281 4.7E-94 T 22-04-2016 VP2703 6e97393ec6b725ef58c95060dbb5a482 281 Pfam PF13401 AAA domain 42 168 4.0E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2703 6e97393ec6b725ef58c95060dbb5a482 281 PANTHER PTHR35894:SF1 2 281 4.7E-94 T 22-04-2016 VP2703 6e97393ec6b725ef58c95060dbb5a482 281 SUPERFAMILY SSF52540 12 260 6.26E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2703 6e97393ec6b725ef58c95060dbb5a482 281 Gene3D G3DSA:3.40.50.300 30 180 5.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 SUPERFAMILY SSF46785 2 109 2.13E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 PANTHER PTHR30419 1 289 2.7E-106 T 22-04-2016 VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 Gene3D G3DSA:1.10.10.10 1 85 7.0E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 Pfam PF03466 LysR substrate binding domain 89 287 5.8E-45 T 22-04-2016 IPR005119 LysR, substrate-binding VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 Gene3D G3DSA:3.40.190.10 90 175 2.3E-20 T 22-04-2016 VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 Gene3D G3DSA:3.40.190.10 176 260 5.4E-18 T 22-04-2016 VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 SUPERFAMILY SSF53850 90 288 2.84E-42 T 22-04-2016 VP1316 bbd67a778e9eed6bf1170d4c22a12198 289 PANTHER PTHR30419:SF4 1 289 2.7E-106 T 22-04-2016 VP0703 7dde9f978f318783341febf8e1dce873 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 2.6E-115 T 22-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VP0703 7dde9f978f318783341febf8e1dce873 258 PIRSF PIRSF029037 1 258 5.1E-116 T 22-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VP2755 14ba8549736d3022e38f7f744d2c0812 90 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 2.8E-37 T 22-04-2016 IPR022072 Protein of unknown function DUF3624 VP1054 48a583f1af061715b758f91bc274b979 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 4.9E-172 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VP1054 48a583f1af061715b758f91bc274b979 378 PIRSF PIRSF000267 2 377 1.8E-123 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VP1054 48a583f1af061715b758f91bc274b979 378 PANTHER PTHR30365:SF6 1 378 4.5E-192 T 22-04-2016 VP1054 48a583f1af061715b758f91bc274b979 378 PANTHER PTHR30365 1 378 4.5E-192 T 22-04-2016 VP1054 48a583f1af061715b758f91bc274b979 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.0E-108 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 PANTHER PTHR11938:SF96 144 182 1.5E-104 T 22-04-2016 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 PANTHER PTHR11938:SF96 1 125 1.5E-104 T 22-04-2016 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 4.8E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1514 2485c1bbf382c8b9b990caf532ce4351 202 SUPERFAMILY SSF54862 1 183 6.38E-48 T 22-04-2016 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 65 120 5.3E-22 T 22-04-2016 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 PANTHER PTHR11938 144 182 1.5E-104 T 22-04-2016 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 PANTHER PTHR11938 1 125 1.5E-104 T 22-04-2016 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 3 64 7.9E-21 T 22-04-2016 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 121 181 7.9E-21 T 22-04-2016 VP1514 2485c1bbf382c8b9b990caf532ce4351 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP0531 83151c744029396f73fa497014920730 86 Gene3D G3DSA:1.20.58.110 1 86 1.0E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0531 83151c744029396f73fa497014920730 86 SUPERFAMILY SSF46992 3 86 1.1E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0531 83151c744029396f73fa497014920730 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.696 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0531 83151c744029396f73fa497014920730 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.9E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0531 83151c744029396f73fa497014920730 86 PANTHER PTHR33398 2 86 1.2E-39 T 22-04-2016 VP0531 83151c744029396f73fa497014920730 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0531 83151c744029396f73fa497014920730 86 Pfam PF01649 Ribosomal protein S20 2 84 6.2E-29 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP3033 2de000dda5f0c6db49148806b5bcb073 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.0E-21 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VP3033 2de000dda5f0c6db49148806b5bcb073 277 PANTHER PTHR21089 1 275 6.8E-149 T 22-04-2016 VP3033 2de000dda5f0c6db49148806b5bcb073 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 5.2E-15 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VP3033 2de000dda5f0c6db49148806b5bcb073 277 SUPERFAMILY SSF53223 6 105 1.38E-30 T 22-04-2016 VP3033 2de000dda5f0c6db49148806b5bcb073 277 SUPERFAMILY SSF51735 106 273 8.47E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain VP3033 2de000dda5f0c6db49148806b5bcb073 277 PANTHER PTHR21089:SF2 1 275 6.8E-149 T 22-04-2016 VP3033 2de000dda5f0c6db49148806b5bcb073 277 Gene3D G3DSA:3.40.192.10 3 111 2.0E-35 T 22-04-2016 VP3033 2de000dda5f0c6db49148806b5bcb073 277 Gene3D G3DSA:3.40.50.720 112 248 2.8E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VP3033 2de000dda5f0c6db49148806b5bcb073 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 3.2E-86 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VP3033 2de000dda5f0c6db49148806b5bcb073 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.337 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 SUPERFAMILY SSF46689 461 512 1.02E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 Gene3D G3DSA:3.40.50.300 202 376 4.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 Gene3D G3DSA:3.30.70.260 1 68 1.8E-6 T 22-04-2016 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 SUPERFAMILY SSF52540 205 445 6.01E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 SUPERFAMILY SSF55785 81 171 7.8E-10 T 22-04-2016 IPR000014 PAS domain VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 SMART SM00091 80 146 7.8E-7 T 22-04-2016 IPR000014 PAS domain VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 SMART SM00382 225 368 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 Pfam PF00989 PAS fold 83 130 4.4E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.0E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 PANTHER PTHR32071 3 514 6.2E-176 T 22-04-2016 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 PANTHER PTHR32071:SF3 3 514 6.2E-176 T 22-04-2016 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 Pfam PF00158 Sigma-54 interaction domain 206 370 4.4E-57 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 Gene3D G3DSA:1.10.8.60 377 449 1.0E-16 T 22-04-2016 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 Gene3D G3DSA:3.30.450.20 79 173 2.0E-8 T 22-04-2016 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 Gene3D G3DSA:1.10.10.60 461 513 5.3E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1869 37d1bda1bb549b26c1caf5edf4b1807f 514 SUPERFAMILY SSF55021 1 68 1.02E-6 T 22-04-2016 VP1194 17aef62b50e09a7d4166aa9c86c9a470 215 Gene3D G3DSA:3.40.50.300 4 200 2.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1194 17aef62b50e09a7d4166aa9c86c9a470 215 SMART SM00382 28 214 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1194 17aef62b50e09a7d4166aa9c86c9a470 215 PANTHER PTHR24220:SF485 4 204 4.0E-101 T 22-04-2016 VP1194 17aef62b50e09a7d4166aa9c86c9a470 215 Pfam PF00005 ABC transporter 22 163 2.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1194 17aef62b50e09a7d4166aa9c86c9a470 215 SUPERFAMILY SSF52540 11 199 2.59E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1194 17aef62b50e09a7d4166aa9c86c9a470 215 PANTHER PTHR24220 4 204 4.0E-101 T 22-04-2016 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 SUPERFAMILY SSF118215 29 417 9.02E-110 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PANTHER PTHR11958:SF54 1 421 7.5E-289 T 22-04-2016 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 Pfam PF00375 Sodium:dicarboxylate symporter family 29 417 1.6E-119 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 244 263 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 161 183 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 21 41 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 346 365 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 209 228 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 372 392 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 62 82 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 311 337 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 9.6E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PANTHER PTHR11958 1 421 7.5E-289 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1966 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 Gene3D G3DSA:1.10.3860.10 20 422 1.8E-113 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 Gene3D G3DSA:3.40.50.150 108 297 3.2E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 1.1E-96 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 PANTHER PTHR18895 4 298 6.0E-181 T 22-04-2016 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.02 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 Gene3D G3DSA:1.10.8.10 15 106 1.2E-5 T 22-04-2016 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 Pfam PF05175 Methyltransferase small domain 134 223 2.3E-18 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 6.7E-139 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 PANTHER PTHR18895:SF66 4 298 6.0E-181 T 22-04-2016 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 PIRSF PIRSF037167 2 307 5.8E-150 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VP2203 a0d4975cf3a84541c4e3dd71f266ee4d 310 SUPERFAMILY SSF53335 16 295 5.23E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2642 25c3242acc03122b0688a67d575a2e5e 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.2E-132 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VP2642 25c3242acc03122b0688a67d575a2e5e 356 PANTHER PTHR33529 1 355 7.2E-150 T 22-04-2016 VP2642 25c3242acc03122b0688a67d575a2e5e 356 PANTHER PTHR33529:SF1 1 355 7.2E-150 T 22-04-2016 VP2642 25c3242acc03122b0688a67d575a2e5e 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 3.8E-70 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VP0082 5abf2ff5858f75a5b2e5b860c658680c 58 PIRSF PIRSF036466 1 55 3.3E-20 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 VP0082 5abf2ff5858f75a5b2e5b860c658680c 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 56 16.217 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 VP0082 5abf2ff5858f75a5b2e5b860c658680c 58 Pfam PF07043 Protein of unknown function (DUF1328) 7 44 7.5E-11 T 22-04-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 VP2144 9fe77cb4040879f101ab0ce740ac598b 84 Gene3D G3DSA:1.10.260.40 7 66 5.2E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP2144 9fe77cb4040879f101ab0ce740ac598b 84 SMART SM00530 12 67 0.0016 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP2144 9fe77cb4040879f101ab0ce740ac598b 84 Pfam PF01381 Helix-turn-helix 13 64 4.2E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP2144 9fe77cb4040879f101ab0ce740ac598b 84 SUPERFAMILY SSF47413 5 69 1.31E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1173 c876ee75fd892a0aef41b1172d2fd6fc 223 PANTHER PTHR31088 2 222 8.0E-109 T 22-04-2016 VP1173 c876ee75fd892a0aef41b1172d2fd6fc 223 Pfam PF04012 PspA/IM30 family 2 217 8.0E-61 T 22-04-2016 IPR007157 PspA/IM30 VP1173 c876ee75fd892a0aef41b1172d2fd6fc 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 3.0E-94 T 22-04-2016 IPR014319 Phage shock protein, PspA VP1173 c876ee75fd892a0aef41b1172d2fd6fc 223 PANTHER PTHR31088:SF7 2 222 8.0E-109 T 22-04-2016 VP2533 19aaa7b972ebbb60be8854dfb6662233 82 Pfam PF00886 Ribosomal protein S16 8 68 5.6E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2533 19aaa7b972ebbb60be8854dfb6662233 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain VP2533 19aaa7b972ebbb60be8854dfb6662233 82 Gene3D G3DSA:3.30.1320.10 1 79 9.5E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain VP2533 19aaa7b972ebbb60be8854dfb6662233 82 PANTHER PTHR12919 1 78 2.1E-38 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2533 19aaa7b972ebbb60be8854dfb6662233 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2533 19aaa7b972ebbb60be8854dfb6662233 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.03 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2533 19aaa7b972ebbb60be8854dfb6662233 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.8E-27 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0695 a828b4af58c5b4af3f44f5002bda0af5 363 PANTHER PTHR37524 2 362 2.2E-193 T 22-04-2016 VP0695 a828b4af58c5b4af3f44f5002bda0af5 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.364 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VP0695 a828b4af58c5b4af3f44f5002bda0af5 363 Gene3D G3DSA:3.40.50.150 186 281 4.4E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0695 a828b4af58c5b4af3f44f5002bda0af5 363 PIRSF PIRSF028774 1 362 2.0E-193 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VP0695 a828b4af58c5b4af3f44f5002bda0af5 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.7E-5 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VP0695 a828b4af58c5b4af3f44f5002bda0af5 363 SUPERFAMILY SSF53335 186 298 1.31E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0695 a828b4af58c5b4af3f44f5002bda0af5 363 PANTHER PTHR37524:SF2 2 362 2.2E-193 T 22-04-2016 VP2496 af4c0e04600154197c6d9feb77298cc7 771 Pfam PF01734 Patatin-like phospholipase 45 235 3.6E-28 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VP2496 af4c0e04600154197c6d9feb77298cc7 771 PANTHER PTHR14226:SF37 146 467 3.7E-96 T 22-04-2016 VP2496 af4c0e04600154197c6d9feb77298cc7 771 PANTHER PTHR14226:SF37 30 130 3.7E-96 T 22-04-2016 VP2496 af4c0e04600154197c6d9feb77298cc7 771 SUPERFAMILY SSF52151 141 324 3.4E-57 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VP2496 af4c0e04600154197c6d9feb77298cc7 771 SUPERFAMILY SSF52151 39 111 3.4E-57 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VP2496 af4c0e04600154197c6d9feb77298cc7 771 Pfam PF07244 Surface antigen variable number repeat 355 425 5.3E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VP2496 af4c0e04600154197c6d9feb77298cc7 771 PANTHER PTHR14226 146 467 3.7E-96 T 22-04-2016 VP2496 af4c0e04600154197c6d9feb77298cc7 771 PANTHER PTHR14226 30 130 3.7E-96 T 22-04-2016 VP2496 af4c0e04600154197c6d9feb77298cc7 771 Gene3D G3DSA:3.40.1090.10 38 237 1.5E-13 T 22-04-2016 VP1031 8e78ce5ed45d07de8e17fbf294051c2a 215 Pfam PF02613 Nitrate reductase delta subunit 50 183 1.6E-36 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1031 8e78ce5ed45d07de8e17fbf294051c2a 215 PANTHER PTHR34227 1 212 6.0E-73 T 22-04-2016 VP1031 8e78ce5ed45d07de8e17fbf294051c2a 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.695 T 22-04-2016 IPR023069 Chaperone TorD VP1031 8e78ce5ed45d07de8e17fbf294051c2a 215 SUPERFAMILY SSF89155 8 212 1.83E-51 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1031 8e78ce5ed45d07de8e17fbf294051c2a 215 Gene3D G3DSA:1.10.3480.10 2 212 2.4E-48 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1031 8e78ce5ed45d07de8e17fbf294051c2a 215 PANTHER PTHR34227:SF1 1 212 6.0E-73 T 22-04-2016 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 PANTHER PTHR30537 1 298 3.7E-107 T 22-04-2016 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 Gene3D G3DSA:3.40.190.10 184 269 2.3E-14 T 22-04-2016 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 Gene3D G3DSA:1.10.10.10 9 90 1.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 SUPERFAMILY SSF53850 93 303 5.07E-35 T 22-04-2016 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 Pfam PF03466 LysR substrate binding domain 93 301 1.1E-29 T 22-04-2016 IPR005119 LysR, substrate-binding VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 PANTHER PTHR30537:SF1 1 298 3.7E-107 T 22-04-2016 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 Gene3D G3DSA:3.40.190.10 97 183 2.7E-19 T 22-04-2016 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1676 b4b7008b2cded5c8613afb908e8dbb18 305 SUPERFAMILY SSF46785 10 116 1.43E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1674 997043b5955f4719925c13598e103b9c 261 PANTHER PTHR30065 1 241 7.6E-102 T 22-04-2016 VP1674 997043b5955f4719925c13598e103b9c 261 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 5 242 2.3E-78 T 22-04-2016 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 VP1674 997043b5955f4719925c13598e103b9c 261 Pfam PF01311 Bacterial export proteins, family 1 11 246 1.7E-55 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP1674 997043b5955f4719925c13598e103b9c 261 PANTHER PTHR30065:SF2 1 241 7.6E-102 T 22-04-2016 VP1674 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 5.2E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP1674 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 5.2E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP1674 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 5.2E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP1674 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 5.2E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VP0338 5228095df815efba4f1775dc9573701e 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 9.8E-21 T 22-04-2016 VP0338 5228095df815efba4f1775dc9573701e 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 1.2E-23 T 22-04-2016 VP0338 5228095df815efba4f1775dc9573701e 427 Gene3D G3DSA:3.10.50.40 168 271 6.9E-27 T 22-04-2016 VP0338 5228095df815efba4f1775dc9573701e 427 Gene3D G3DSA:3.10.50.40 278 401 9.8E-34 T 22-04-2016 VP0338 5228095df815efba4f1775dc9573701e 427 PANTHER PTHR10657 7 422 2.0E-130 T 22-04-2016 VP0338 5228095df815efba4f1775dc9573701e 427 PANTHER PTHR10657:SF15 7 422 2.0E-130 T 22-04-2016 VP0338 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF109998 24 196 1.7E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain VP0338 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF54534 278 380 2.42E-29 T 22-04-2016 VP0338 5228095df815efba4f1775dc9573701e 427 Pfam PF09312 SurA N-terminal domain 24 141 3.7E-43 T 22-04-2016 IPR015391 SurA N-terminal VP0338 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF54534 172 270 1.96E-24 T 22-04-2016 VP0338 5228095df815efba4f1775dc9573701e 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.976 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 VP1492 5ad68bde9a3ed81258ab1f5d0bad5348 275 PANTHER PTHR11863:SF2 53 268 2.2E-32 T 22-04-2016 VP1492 5ad68bde9a3ed81258ab1f5d0bad5348 275 Pfam PF04116 Fatty acid hydroxylase superfamily 92 229 3.7E-25 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 VP1492 5ad68bde9a3ed81258ab1f5d0bad5348 275 PANTHER PTHR11863 53 268 2.2E-32 T 22-04-2016 VP2842 2e77446d68474e830ab1e9975649be88 127 PIRSF PIRSF000180 1 127 1.7E-57 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VP2842 2e77446d68474e830ab1e9975649be88 127 SUPERFAMILY SSF81343 1 127 1.02E-52 T 22-04-2016 VP2842 2e77446d68474e830ab1e9975649be88 127 Gene3D G3DSA:1.20.1300.10 1 127 5.2E-54 T 22-04-2016 VP2842 2e77446d68474e830ab1e9975649be88 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.979 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VP2842 2e77446d68474e830ab1e9975649be88 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.7E-49 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VP2842 2e77446d68474e830ab1e9975649be88 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 5.0E-52 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VP2120 dc063dc0c965ad27f57d43834be4ea3d 227 Gene3D G3DSA:3.40.50.720 2 190 6.3E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2120 dc063dc0c965ad27f57d43834be4ea3d 227 SUPERFAMILY SSF51735 1 209 2.55E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2120 dc063dc0c965ad27f57d43834be4ea3d 227 Pfam PF00106 short chain dehydrogenase 7 191 3.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2805 3baaaa9444529a56f6482a0e19871ff8 228 PANTHER PTHR18901:SF14 1 224 1.3E-71 T 22-04-2016 VP2805 3baaaa9444529a56f6482a0e19871ff8 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 89 193 4.0E-14 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VP2805 3baaaa9444529a56f6482a0e19871ff8 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 5.3E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VP2805 3baaaa9444529a56f6482a0e19871ff8 228 SUPERFAMILY SSF56784 5 224 1.81E-61 T 22-04-2016 IPR023214 HAD-like domain VP2805 3baaaa9444529a56f6482a0e19871ff8 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 1.0E-60 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VP2805 3baaaa9444529a56f6482a0e19871ff8 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 194 4.2E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VP2805 3baaaa9444529a56f6482a0e19871ff8 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 1.6E-39 T 22-04-2016 IPR023214 HAD-like domain VP2805 3baaaa9444529a56f6482a0e19871ff8 228 Gene3D G3DSA:3.40.50.1000 96 224 4.6E-46 T 22-04-2016 IPR023214 HAD-like domain VP2805 3baaaa9444529a56f6482a0e19871ff8 228 Gene3D G3DSA:3.40.50.1000 3 33 4.6E-46 T 22-04-2016 IPR023214 HAD-like domain VP2805 3baaaa9444529a56f6482a0e19871ff8 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.554 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VP2805 3baaaa9444529a56f6482a0e19871ff8 228 Gene3D G3DSA:1.10.150.240 34 89 2.9E-23 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 VP2805 3baaaa9444529a56f6482a0e19871ff8 228 PANTHER PTHR18901 1 224 1.3E-71 T 22-04-2016 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 Gene3D G3DSA:3.40.47.10 1 160 1.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 4.7E-146 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 SUPERFAMILY SSF53901 3 315 7.49E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 PANTHER PTHR18919 26 316 2.0E-131 T 22-04-2016 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 8.5E-32 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 PANTHER PTHR18919:SF109 26 316 2.0E-131 T 22-04-2016 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 9.5E-35 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 Gene3D G3DSA:3.40.47.10 161 315 1.0E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VP2056 2093ebdc4c0232c24a2b4eae1fd352af 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.093 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VP3049 48d0290788769ce3f2911231932886b5 270 PANTHER PTHR40053 3 270 1.6E-85 T 22-04-2016 VP3049 48d0290788769ce3f2911231932886b5 270 Pfam PF07070 SpoOM protein 6 221 4.7E-77 T 22-04-2016 IPR009776 Sporulation stage 0, protein M VP1454 7d0fcae2e007f655f1f6221b9484e577 159 Gene3D G3DSA:2.40.160.20 6 158 4.1E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP1454 7d0fcae2e007f655f1f6221b9484e577 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 1.1E-17 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VP1454 7d0fcae2e007f655f1f6221b9484e577 159 SUPERFAMILY SSF56925 17 158 8.89E-21 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP1283 e3322d0d61802b779f3d622f8cad0f30 105 Pfam PF01906 Putative heavy-metal-binding 1 103 1.1E-39 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 VP1283 e3322d0d61802b779f3d622f8cad0f30 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 26.224 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 VP1283 e3322d0d61802b779f3d622f8cad0f30 105 PANTHER PTHR34068:SF3 1 103 6.6E-44 T 22-04-2016 VP1283 e3322d0d61802b779f3d622f8cad0f30 105 Gene3D G3DSA:3.30.110.70 1 103 2.8E-38 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 VP1283 e3322d0d61802b779f3d622f8cad0f30 105 PANTHER PTHR34068 1 103 6.6E-44 T 22-04-2016 VP1283 e3322d0d61802b779f3d622f8cad0f30 105 SUPERFAMILY SSF117782 1 103 4.97E-38 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 VP2609 72106b62abbfb673ccbb4febd212c60d 231 PANTHER PTHR33607 23 230 2.8E-54 T 22-04-2016 VP2609 72106b62abbfb673ccbb4febd212c60d 231 Pfam PF04231 Endonuclease I 33 227 1.1E-46 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 VP2609 72106b62abbfb673ccbb4febd212c60d 231 SUPERFAMILY SSF54060 20 228 1.09E-93 T 22-04-2016 VP0057 63c4c5752dc8c2a01e15bdd026fe5f87 450 SUPERFAMILY SSF56112 73 281 7.28E-52 T 22-04-2016 IPR011009 Protein kinase-like domain VP0057 63c4c5752dc8c2a01e15bdd026fe5f87 450 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 110 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 VP0057 63c4c5752dc8c2a01e15bdd026fe5f87 450 PANTHER PTHR24362 15 312 5.0E-49 T 22-04-2016 VP0057 63c4c5752dc8c2a01e15bdd026fe5f87 450 Gene3D G3DSA:1.10.510.10 189 274 2.3E-23 T 22-04-2016 VP0057 63c4c5752dc8c2a01e15bdd026fe5f87 450 SMART SM00220 79 325 4.1E-28 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VP0057 63c4c5752dc8c2a01e15bdd026fe5f87 450 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 198 210 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VP0057 63c4c5752dc8c2a01e15bdd026fe5f87 450 Gene3D G3DSA:3.30.200.20 65 188 2.0E-28 T 22-04-2016 VP0057 63c4c5752dc8c2a01e15bdd026fe5f87 450 Pfam PF00069 Protein kinase domain 79 280 2.8E-38 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 SUPERFAMILY SSF56801 9 644 1.7E-182 T 22-04-2016 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.325 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 Gene3D G3DSA:3.40.50.980 80 266 1.1E-43 T 22-04-2016 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 Gene3D G3DSA:3.30.300.30 519 639 1.1E-27 T 22-04-2016 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-20 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 5.8E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 Gene3D G3DSA:3.40.50.980 267 427 1.4E-26 T 22-04-2016 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 Pfam PF00501 AMP-binding enzyme 84 523 1.5E-88 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 PANTHER PTHR24095 6 648 0.0 T 22-04-2016 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 PANTHER PTHR24095:SF178 6 648 0.0 T 22-04-2016 VP2878 8e41c32b20de4dfe1bdd65a46357fd00 650 Gene3D G3DSA:2.30.38.10 439 516 6.1E-7 T 22-04-2016 VP2310 85e58b992783507e4fa07b9a236dcab2 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 6.4E-278 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VP2310 85e58b992783507e4fa07b9a236dcab2 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.849 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VP2310 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF01103 Surface antigen 448 804 3.2E-91 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VP2310 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 176 263 8.4E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VP2310 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 266 344 2.9E-10 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VP2310 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.3E-17 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VP2310 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 92 172 1.2E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VP2310 85e58b992783507e4fa07b9a236dcab2 804 PIRSF PIRSF006076 1 804 3.9E-245 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VP2310 85e58b992783507e4fa07b9a236dcab2 804 PANTHER PTHR12815 5 675 8.2E-290 T 22-04-2016 VP2310 85e58b992783507e4fa07b9a236dcab2 804 PANTHER PTHR12815 691 804 8.2E-290 T 22-04-2016 VP2310 85e58b992783507e4fa07b9a236dcab2 804 PANTHER PTHR12815:SF11 5 675 8.2E-290 T 22-04-2016 VP2310 85e58b992783507e4fa07b9a236dcab2 804 PANTHER PTHR12815:SF11 691 804 8.2E-290 T 22-04-2016 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PANTHER PTHR11616 1 474 6.0E-181 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 2.0E-39 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 462 1.2E-76 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 SUPERFAMILY SSF161070 3 475 4.97E-148 T 22-04-2016 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2043 1d8c6f1eab984689b90c82099e36a25c 488 PANTHER PTHR11616:SF11 1 474 6.0E-181 T 22-04-2016 VP0307 5522c0a24705c39243194d5294ebe3bd 570 Gene3D G3DSA:2.40.160.50 419 567 1.1E-21 T 22-04-2016 VP0307 5522c0a24705c39243194d5294ebe3bd 570 Gene3D G3DSA:2.40.160.50 294 367 1.1E-21 T 22-04-2016 VP0307 5522c0a24705c39243194d5294ebe3bd 570 Pfam PF01103 Surface antigen 274 567 2.4E-28 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VP0307 5522c0a24705c39243194d5294ebe3bd 570 Pfam PF07244 Surface antigen variable number repeat 102 179 2.2E-6 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VP0307 5522c0a24705c39243194d5294ebe3bd 570 PANTHER PTHR12815:SF12 8 570 5.5E-210 T 22-04-2016 VP0307 5522c0a24705c39243194d5294ebe3bd 570 PANTHER PTHR12815 8 570 5.5E-210 T 22-04-2016 VP2426 043d625e33977edb9408b0c8a0fc9627 69 Pfam PF06568 Domain of unknown function (DUF1127) 24 59 5.5E-11 T 22-04-2016 IPR009506 Protein of unknown function DUF1127 VP0709 80e115698fe83399e4edd05faa49d099 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0709 80e115698fe83399e4edd05faa49d099 315 Gene3D G3DSA:3.40.50.2300 57 174 1.3E-24 T 22-04-2016 VP0709 80e115698fe83399e4edd05faa49d099 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0709 80e115698fe83399e4edd05faa49d099 315 PANTHER PTHR30146:SF42 4 304 4.0E-165 T 22-04-2016 VP0709 80e115698fe83399e4edd05faa49d099 315 Gene3D G3DSA:3.40.50.2300 175 278 1.0E-36 T 22-04-2016 VP0709 80e115698fe83399e4edd05faa49d099 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 7.2E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0709 80e115698fe83399e4edd05faa49d099 315 Pfam PF13377 Periplasmic binding protein-like domain 168 307 2.4E-16 T 22-04-2016 VP0709 80e115698fe83399e4edd05faa49d099 315 Gene3D G3DSA:1.10.260.40 6 56 7.3E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0709 80e115698fe83399e4edd05faa49d099 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 3.2E-139 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VP0709 80e115698fe83399e4edd05faa49d099 315 SMART SM00354 4 74 2.1E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VP0709 80e115698fe83399e4edd05faa49d099 315 SUPERFAMILY SSF53822 63 307 7.07E-59 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VP0709 80e115698fe83399e4edd05faa49d099 315 PANTHER PTHR30146 4 304 4.0E-165 T 22-04-2016 VP2551 6d09b6f3f105ce0e4231157308d5431c 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 158 2.2E-50 T 22-04-2016 IPR008136 CinA, C-terminal VP2551 6d09b6f3f105ce0e4231157308d5431c 160 PANTHER PTHR13939 2 159 5.1E-70 T 22-04-2016 VP2551 6d09b6f3f105ce0e4231157308d5431c 160 Pfam PF02464 Competence-damaged protein 6 158 4.7E-56 T 22-04-2016 IPR008136 CinA, C-terminal VP2551 6d09b6f3f105ce0e4231157308d5431c 160 SUPERFAMILY SSF142433 4 159 5.1E-56 T 22-04-2016 IPR008136 CinA, C-terminal VP2551 6d09b6f3f105ce0e4231157308d5431c 160 Gene3D G3DSA:3.90.950.20 2 159 1.5E-56 T 22-04-2016 IPR008136 CinA, C-terminal VP0267 c9b332bb286f20030c1364bc18190d37 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.739 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VP0267 c9b332bb286f20030c1364bc18190d37 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.9E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VP0267 c9b332bb286f20030c1364bc18190d37 123 SUPERFAMILY SSF50193 2 122 9.03E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VP0267 c9b332bb286f20030c1364bc18190d37 123 PANTHER PTHR11761 1 123 6.4E-77 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VP0267 c9b332bb286f20030c1364bc18190d37 123 SMART SM01374 1 123 3.3E-85 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VP0267 c9b332bb286f20030c1364bc18190d37 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site VP0267 c9b332bb286f20030c1364bc18190d37 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 2.8E-58 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VP0267 c9b332bb286f20030c1364bc18190d37 123 Gene3D G3DSA:2.40.150.20 1 123 3.2E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VP0988 48c188bf134c8d1e161ff16915f08dab 644 SUPERFAMILY SSF52540 73 145 7.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0988 48c188bf134c8d1e161ff16915f08dab 644 SUPERFAMILY SSF52540 236 368 7.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0988 48c188bf134c8d1e161ff16915f08dab 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.2E-73 T 22-04-2016 IPR010650 PrkA C-terminal domain VP0988 48c188bf134c8d1e161ff16915f08dab 644 SMART SM00763 19 380 1.6E-220 T 22-04-2016 IPR013153 PrkA AAA domain VP0988 48c188bf134c8d1e161ff16915f08dab 644 PANTHER PTHR30267 1 644 3.0E-300 T 22-04-2016 VP0988 48c188bf134c8d1e161ff16915f08dab 644 PIRSF PIRSF000549 1 644 7.0E-290 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 VP0988 48c188bf134c8d1e161ff16915f08dab 644 PANTHER PTHR30267:SF2 1 644 3.0E-300 T 22-04-2016 VP0988 48c188bf134c8d1e161ff16915f08dab 644 Gene3D G3DSA:3.40.50.300 243 329 4.5E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0988 48c188bf134c8d1e161ff16915f08dab 644 Gene3D G3DSA:3.40.50.300 74 158 4.5E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0988 48c188bf134c8d1e161ff16915f08dab 644 Pfam PF08298 PrkA AAA domain 19 380 1.5E-176 T 22-04-2016 IPR013153 PrkA AAA domain VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 Pfam PF13522 Glutamine amidotransferase domain 63 207 2.4E-17 T 22-04-2016 VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 Gene3D G3DSA:3.40.50.2020 270 443 6.0E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.0E-165 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 SUPERFAMILY SSF53271 249 482 8.92E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 Pfam PF00156 Phosphoribosyl transferase domain 278 389 7.3E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 PIRSF PIRSF000485 1 479 6.7E-169 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 Gene3D G3DSA:3.60.20.10 2 257 2.1E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 PANTHER PTHR11907:SF0 1 477 1.2E-256 T 22-04-2016 VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 SUPERFAMILY SSF56235 2 256 5.49E-71 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 PANTHER PTHR11907 1 477 1.2E-256 T 22-04-2016 VP2185 7882a2633a7db09a9d23e5cbc0563f61 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.813 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VP2131 c1bcd12453f5e1c2775638a78988312f 445 PANTHER PTHR30349 187 437 3.8E-25 T 22-04-2016 VP2131 c1bcd12453f5e1c2775638a78988312f 445 Gene3D G3DSA:1.10.150.130 139 228 2.5E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VP2131 c1bcd12453f5e1c2775638a78988312f 445 Gene3D G3DSA:1.10.443.10 244 424 7.9E-22 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP2131 c1bcd12453f5e1c2775638a78988312f 445 Pfam PF00589 Phage integrase family 249 423 2.4E-14 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP2131 c1bcd12453f5e1c2775638a78988312f 445 PANTHER PTHR30349:SF20 187 437 3.8E-25 T 22-04-2016 VP2131 c1bcd12453f5e1c2775638a78988312f 445 SUPERFAMILY SSF56349 142 426 5.89E-37 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP0231 4ddfac44681c3992fff33d9e385a9f1e 200 PANTHER PTHR30576 2 185 6.0E-108 T 22-04-2016 VP0231 4ddfac44681c3992fff33d9e385a9f1e 200 Pfam PF02397 Bacterial sugar transferase 3 177 1.9E-57 T 22-04-2016 IPR003362 Bacterial sugar transferase VP0231 4ddfac44681c3992fff33d9e385a9f1e 200 PANTHER PTHR30576:SF8 2 185 6.0E-108 T 22-04-2016 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 PANTHER PTHR33910 2 126 5.3E-30 T 22-04-2016 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.517 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.93E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.93E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.93E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.93E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 Gene3D G3DSA:1.20.5.1030 65 121 1.3E-24 T 22-04-2016 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 4.6E-21 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 9.6E-18 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VP2928 96118cd06073aeecf8d5ce715d47f0b7 126 PANTHER PTHR33910:SF1 2 126 5.3E-30 T 22-04-2016 VP2814 16001a182864b63beba7f81d5107d9d2 326 PANTHER PTHR10264 1 144 2.7E-105 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP2814 16001a182864b63beba7f81d5107d9d2 326 PANTHER PTHR10264 174 322 2.7E-105 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VP2814 16001a182864b63beba7f81d5107d9d2 326 SMART SM00244 18 218 5.4E-49 T 22-04-2016 IPR001107 Band 7 domain VP2814 16001a182864b63beba7f81d5107d9d2 326 SUPERFAMILY SSF117892 56 142 2.88E-21 T 22-04-2016 IPR001107 Band 7 domain VP2814 16001a182864b63beba7f81d5107d9d2 326 SUPERFAMILY SSF117892 173 223 2.88E-21 T 22-04-2016 IPR001107 Band 7 domain VP2814 16001a182864b63beba7f81d5107d9d2 326 PANTHER PTHR10264:SF80 1 144 2.7E-105 T 22-04-2016 VP2814 16001a182864b63beba7f81d5107d9d2 326 PANTHER PTHR10264:SF80 174 322 2.7E-105 T 22-04-2016 VP2814 16001a182864b63beba7f81d5107d9d2 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 1.1E-136 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VP2814 16001a182864b63beba7f81d5107d9d2 326 Pfam PF01145 SPFH domain / Band 7 family 22 236 8.3E-30 T 22-04-2016 IPR001107 Band 7 domain VP2814 16001a182864b63beba7f81d5107d9d2 326 PIRSF PIRSF005651 1 326 4.5E-96 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VP2026 bf275f830b0c60dae189457dc7624c1a 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 1.4E-54 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2026 bf275f830b0c60dae189457dc7624c1a 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.486 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2026 bf275f830b0c60dae189457dc7624c1a 233 PANTHER PTHR32119:SF2 1 230 3.0E-120 T 22-04-2016 VP2026 bf275f830b0c60dae189457dc7624c1a 233 Gene3D G3DSA:3.20.20.70 3 229 3.0E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2026 bf275f830b0c60dae189457dc7624c1a 233 SMART SM00934 5 226 3.3E-102 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2026 bf275f830b0c60dae189457dc7624c1a 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2026 bf275f830b0c60dae189457dc7624c1a 233 SUPERFAMILY SSF51366 1 228 6.6E-78 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VP2026 bf275f830b0c60dae189457dc7624c1a 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 2.2E-58 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VP2026 bf275f830b0c60dae189457dc7624c1a 233 PANTHER PTHR32119 1 230 3.0E-120 T 22-04-2016 VP0962 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:3.40.1350.10 241 382 3.1E-59 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VP0962 867396251366f03a7121fe87122e28d1 386 SUPERFAMILY SSF52980 1 382 2.86E-120 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VP0962 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:1.10.10.680 163 240 6.1E-53 T 22-04-2016 VP0962 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:3.40.50.10770 1 140 3.8E-62 T 22-04-2016 VP0962 867396251366f03a7121fe87122e28d1 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.4E-163 T 22-04-2016 IPR015093 Protein of unknown function DUF1887 VP2129 beded363512931529777b905dc94eef2 75 SUPERFAMILY SSF158651 1 75 7.59E-29 T 22-04-2016 VP2129 beded363512931529777b905dc94eef2 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 7.0E-33 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VP2129 beded363512931529777b905dc94eef2 75 Gene3D G3DSA:1.10.3390.10 1 75 5.6E-33 T 22-04-2016 IPR023202 YejL-like domain VP2129 beded363512931529777b905dc94eef2 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.22 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VP2129 beded363512931529777b905dc94eef2 75 PIRSF PIRSF006188 1 72 7.5E-37 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VP2129 beded363512931529777b905dc94eef2 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 8.7E-19 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VP1073 32cf27d149df35bb905c0a87f1f3f5fd 80 SUPERFAMILY SSF47413 2 72 9.57E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1073 32cf27d149df35bb905c0a87f1f3f5fd 80 Pfam PF01381 Helix-turn-helix 11 68 8.7E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP1073 32cf27d149df35bb905c0a87f1f3f5fd 80 Gene3D G3DSA:1.10.260.40 5 74 1.7E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1073 32cf27d149df35bb905c0a87f1f3f5fd 80 SMART SM00530 10 70 1.3E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP1593 b33b14eb037e0466fc1302ffdec75f9c 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.537 T 22-04-2016 IPR007040 Ribosome modulation factor VP1593 b33b14eb037e0466fc1302ffdec75f9c 57 Pfam PF04957 Ribosome modulation factor 1 54 3.1E-28 T 22-04-2016 IPR007040 Ribosome modulation factor VP1593 b33b14eb037e0466fc1302ffdec75f9c 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 7.0E-23 T 22-04-2016 IPR007040 Ribosome modulation factor VP1593 b33b14eb037e0466fc1302ffdec75f9c 57 Gene3D G3DSA:1.10.10.620 1 57 3.4E-28 T 22-04-2016 IPR023200 Ribosome modulation factor-like domain VP0549 27cfc473481ae335d3497e23b99fe1a3 122 Gene3D G3DSA:2.40.10.220 1 121 6.9E-38 T 22-04-2016 VP0549 27cfc473481ae335d3497e23b99fe1a3 122 Pfam PF07238 PilZ domain 3 100 1.2E-13 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VP0549 27cfc473481ae335d3497e23b99fe1a3 122 PIRSF PIRSF028141 1 120 4.3E-35 T 22-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type VP0549 27cfc473481ae335d3497e23b99fe1a3 122 SUPERFAMILY SSF141371 1 120 4.51E-29 T 22-04-2016 VP1743 0f855fbb69be44c7b81ea43c3432cb73 211 PANTHER PTHR30086 1 210 5.7E-93 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP1743 0f855fbb69be44c7b81ea43c3432cb73 211 PANTHER PTHR30086:SF2 1 210 5.7E-93 T 22-04-2016 VP1743 0f855fbb69be44c7b81ea43c3432cb73 211 PIRSF PIRSF006324 1 209 1.2E-56 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP1743 0f855fbb69be44c7b81ea43c3432cb73 211 Pfam PF01810 LysE type translocator 15 208 2.6E-33 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP1752 c545708bb87aca226b1482cc04739d0c 241 SUPERFAMILY SSF81901 34 200 7.59E-21 T 22-04-2016 VP1752 c545708bb87aca226b1482cc04739d0c 241 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 239 5.3E-80 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW VP1752 c545708bb87aca226b1482cc04739d0c 241 Gene3D G3DSA:1.25.40.10 39 236 5.9E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1752 c545708bb87aca226b1482cc04739d0c 241 Pfam PF13431 Tetratricopeptide repeat 95 127 1.7E-6 T 22-04-2016 VP1752 c545708bb87aca226b1482cc04739d0c 241 Pfam PF14559 Tetratricopeptide repeat 153 197 1.0E-5 T 22-04-2016 VP1752 c545708bb87aca226b1482cc04739d0c 241 PANTHER PTHR23083 38 206 5.1E-18 T 22-04-2016 VP1752 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 39 72 42.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1752 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 73 106 6.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1752 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 107 140 46.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1752 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 143 176 0.66 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 SUPERFAMILY SSF51011 527 607 3.96E-12 T 22-04-2016 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 PANTHER PTHR10357:SF144 34 136 1.2E-178 T 22-04-2016 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 PANTHER PTHR10357:SF144 171 571 1.2E-178 T 22-04-2016 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 SUPERFAMILY SSF81296 1 109 8.75E-18 T 22-04-2016 IPR014756 Immunoglobulin E-set VP2077 a1f1a98e389d53150e41ebf660234bcd 608 SMART SM00642 126 518 5.8E-83 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 Pfam PF16657 Maltogenic Amylase, C-terminal domain 527 585 2.9E-6 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal VP2077 a1f1a98e389d53150e41ebf660234bcd 608 PANTHER PTHR10357 34 136 1.2E-178 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 PANTHER PTHR10357 171 571 1.2E-178 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 3.1E-77 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 SUPERFAMILY SSF51445 113 527 4.23E-95 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP2077 a1f1a98e389d53150e41ebf660234bcd 608 PIRSF PIRSF036918 1 608 2.0E-264 T 22-04-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 Gene3D G3DSA:2.60.40.1180 522 605 7.0E-18 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta VP2077 a1f1a98e389d53150e41ebf660234bcd 608 Gene3D G3DSA:3.20.20.80 118 520 1.1E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 8 104 1.8E-5 T 22-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 VP2077 a1f1a98e389d53150e41ebf660234bcd 608 Gene3D G3DSA:2.60.40.10 16 117 1.0E-8 T 22-04-2016 IPR013783 Immunoglobulin-like fold VP2570 3dcbaf5bf07851aa97cfb74f891db788 243 Pfam PF11967 Recombination protein O N terminal 11 81 2.4E-24 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal VP2570 3dcbaf5bf07851aa97cfb74f891db788 243 SUPERFAMILY SSF50249 10 80 5.82E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2570 3dcbaf5bf07851aa97cfb74f891db788 243 SUPERFAMILY SSF57863 91 169 6.28E-12 T 22-04-2016 VP2570 3dcbaf5bf07851aa97cfb74f891db788 243 Gene3D G3DSA:2.40.50.140 12 80 2.6E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2570 3dcbaf5bf07851aa97cfb74f891db788 243 Pfam PF02565 Recombination protein O C terminal 90 230 1.0E-23 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VP2570 3dcbaf5bf07851aa97cfb74f891db788 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 4.8E-41 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VP2570 3dcbaf5bf07851aa97cfb74f891db788 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.918 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VP2570 3dcbaf5bf07851aa97cfb74f891db788 243 PANTHER PTHR33991 6 239 1.7E-65 T 22-04-2016 VP0505 5daae2d69a391b3b4e308b8bc4644751 407 Gene3D G3DSA:3.40.50.300 214 375 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0505 5daae2d69a391b3b4e308b8bc4644751 407 Pfam PF00271 Helicase conserved C-terminal domain 235 341 8.2E-31 T 22-04-2016 IPR001650 Helicase, C-terminal VP0505 5daae2d69a391b3b4e308b8bc4644751 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VP0505 5daae2d69a391b3b4e308b8bc4644751 407 SUPERFAMILY SSF52540 76 358 1.12E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0505 5daae2d69a391b3b4e308b8bc4644751 407 PANTHER PTHR24031:SF334 2 407 3.3E-200 T 22-04-2016 VP0505 5daae2d69a391b3b4e308b8bc4644751 407 Gene3D G3DSA:3.40.50.300 2 213 2.1E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0505 5daae2d69a391b3b4e308b8bc4644751 407 SMART SM00487 22 222 3.4E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP0505 5daae2d69a391b3b4e308b8bc4644751 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 3.2E-45 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VP0505 5daae2d69a391b3b4e308b8bc4644751 407 SMART SM00490 260 341 1.3E-31 T 22-04-2016 IPR001650 Helicase, C-terminal VP0505 5daae2d69a391b3b4e308b8bc4644751 407 PANTHER PTHR24031 2 407 3.3E-200 T 22-04-2016 VP0505 5daae2d69a391b3b4e308b8bc4644751 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.707 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VP0866 b44171a607729a6b94add48871355b0e 233 PANTHER PTHR11735:SF11 1 139 2.0E-61 T 22-04-2016 VP0866 b44171a607729a6b94add48871355b0e 233 SUPERFAMILY SSF53067 4 107 4.27E-32 T 22-04-2016 VP0866 b44171a607729a6b94add48871355b0e 233 PANTHER PTHR11735 1 139 2.0E-61 T 22-04-2016 VP0866 b44171a607729a6b94add48871355b0e 233 Gene3D G3DSA:3.30.420.40 4 133 1.8E-47 T 22-04-2016 VP0866 b44171a607729a6b94add48871355b0e 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 8.8E-70 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 VP0866 b44171a607729a6b94add48871355b0e 233 Pfam PF00814 Glycoprotease family 30 175 1.6E-32 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VP0866 b44171a607729a6b94add48871355b0e 233 SUPERFAMILY SSF53067 111 219 2.85E-28 T 22-04-2016 VP0497 585a6e7b730b25048f5e0ba0972f6488 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VP0497 585a6e7b730b25048f5e0ba0972f6488 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.409 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VP0497 585a6e7b730b25048f5e0ba0972f6488 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.5E-68 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VP0497 585a6e7b730b25048f5e0ba0972f6488 125 SUPERFAMILY SSF51998 64 124 1.01E-23 T 22-04-2016 VP0497 585a6e7b730b25048f5e0ba0972f6488 125 Pfam PF01228 Glycine radical 15 106 3.2E-23 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VP0497 585a6e7b730b25048f5e0ba0972f6488 125 PANTHER PTHR30191:SF5 1 125 4.0E-93 T 22-04-2016 VP0497 585a6e7b730b25048f5e0ba0972f6488 125 Gene3D G3DSA:3.20.70.20 38 124 1.2E-33 T 22-04-2016 VP0497 585a6e7b730b25048f5e0ba0972f6488 125 PANTHER PTHR30191 1 125 4.0E-93 T 22-04-2016 VP0497 585a6e7b730b25048f5e0ba0972f6488 125 PIRSF PIRSF000378 2 125 3.3E-54 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VP2940 b5caa2d21ac759436554b7e43b0b9f47 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 115 7.4E-50 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 VP2940 b5caa2d21ac759436554b7e43b0b9f47 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 6.0E-59 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 PANTHER PTHR22931:SF23 181 715 5.1E-283 T 22-04-2016 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 SUPERFAMILY SSF51621 423 714 1.1E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 SMART SM00065 17 163 1.4E-21 T 22-04-2016 IPR003018 GAF domain GO:0005515 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 SUPERFAMILY SSF55781 2 158 2.18E-31 T 22-04-2016 IPR029016 GAF domain-like VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 Pfam PF01590 GAF domain 17 153 9.6E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.8E-15 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 1.2E-21 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 22-04-2016 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 22-04-2016 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 22-04-2016 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 22-04-2016 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 Gene3D G3DSA:3.50.30.10 302 414 2.9E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 SUPERFAMILY SSF47831 204 311 6.28E-27 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 1.1E-95 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 SUPERFAMILY SSF52009 293 412 7.19E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 Gene3D G3DSA:3.20.20.60 424 733 1.4E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 PANTHER PTHR22931 181 715 5.1E-283 T 22-04-2016 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 1.0E-136 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 Gene3D G3DSA:1.10.274.10 201 301 1.5E-30 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VP0521 b2afa08e97224dcbe2eef2b32cd3a6fe 748 Gene3D G3DSA:3.30.450.40 1 160 1.2E-42 T 22-04-2016 IPR029016 GAF domain-like VP2509 53c25e176d2838f496c4c9665a6e218d 309 PIRSF PIRSF026649 5 306 3.3E-72 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP2509 53c25e176d2838f496c4c9665a6e218d 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 308 6.4E-136 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VP2509 53c25e176d2838f496c4c9665a6e218d 309 PANTHER PTHR30606 4 308 7.5E-121 T 22-04-2016 VP2509 53c25e176d2838f496c4c9665a6e218d 309 PANTHER PTHR30606:SF5 4 308 7.5E-121 T 22-04-2016 VP2509 53c25e176d2838f496c4c9665a6e218d 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 43.372 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VP2509 53c25e176d2838f496c4c9665a6e218d 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 299 1.8E-69 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP1485 7cd39e118d005a50254a576cc5e14dbb 159 Pfam PF00877 NlpC/P60 family 52 156 5.6E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP1485 7cd39e118d005a50254a576cc5e14dbb 159 PANTHER PTHR21666:SF210 1 157 2.6E-38 T 22-04-2016 VP1485 7cd39e118d005a50254a576cc5e14dbb 159 Gene3D G3DSA:3.90.1720.10 42 157 2.1E-41 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP1485 7cd39e118d005a50254a576cc5e14dbb 159 PANTHER PTHR21666 1 157 2.6E-38 T 22-04-2016 VP1485 7cd39e118d005a50254a576cc5e14dbb 159 SUPERFAMILY SSF54001 41 157 6.13E-40 T 22-04-2016 VP2046 a2c77030d9baaaa1054171768da35a5e 476 PANTHER PTHR30009 6 475 3.6E-236 T 22-04-2016 VP2046 a2c77030d9baaaa1054171768da35a5e 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 4.2E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP2046 a2c77030d9baaaa1054171768da35a5e 476 PANTHER PTHR30009:SF2 6 475 3.6E-236 T 22-04-2016 VP2046 a2c77030d9baaaa1054171768da35a5e 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VP2046 a2c77030d9baaaa1054171768da35a5e 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.5E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VP2046 a2c77030d9baaaa1054171768da35a5e 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.4E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VP2046 a2c77030d9baaaa1054171768da35a5e 476 Gene3D G3DSA:3.30.1360.60 397 472 8.3E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP2046 a2c77030d9baaaa1054171768da35a5e 476 SUPERFAMILY SSF55604 399 472 9.68E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VP2046 a2c77030d9baaaa1054171768da35a5e 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.8E-198 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP1116 bdc62fa6c142b051445e0fb84d6414ad 235 PIRSF PIRSF006755 8 233 1.1E-79 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VP1116 bdc62fa6c142b051445e0fb84d6414ad 235 Gene3D G3DSA:3.40.50.300 11 228 5.1E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1116 bdc62fa6c142b051445e0fb84d6414ad 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 9 219 29.933 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VP1116 bdc62fa6c142b051445e0fb84d6414ad 235 SUPERFAMILY SSF52540 8 222 3.76E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1116 bdc62fa6c142b051445e0fb84d6414ad 235 PANTHER PTHR21343:SF13 7 232 5.9E-121 T 22-04-2016 VP1116 bdc62fa6c142b051445e0fb84d6414ad 235 Pfam PF13500 AAA domain 11 218 1.3E-39 T 22-04-2016 VP1116 bdc62fa6c142b051445e0fb84d6414ad 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 13 183 6.8E-55 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VP1116 bdc62fa6c142b051445e0fb84d6414ad 235 PANTHER PTHR21343 7 232 5.9E-121 T 22-04-2016 VP2996 8fd64bffe73b355ab1b22e408368a148 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 78 7.2E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP2996 8fd64bffe73b355ab1b22e408368a148 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VP2996 8fd64bffe73b355ab1b22e408368a148 89 SUPERFAMILY SSF54292 2 87 8.39E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP2996 8fd64bffe73b355ab1b22e408368a148 89 Gene3D G3DSA:3.10.20.30 2 86 6.6E-25 T 22-04-2016 IPR012675 Beta-grasp domain VPA0578 77e83efcee14699580c8b5247540412b 31 PANTHER PTHR11638 1 31 7.9E-18 T 22-04-2016 VPA0578 77e83efcee14699580c8b5247540412b 31 PANTHER PTHR11638:SF18 1 31 7.9E-18 T 22-04-2016 VP2666 e64b217215058ea437565771e73905a0 323 Gene3D G3DSA:3.40.50.10490 11 191 1.3E-54 T 22-04-2016 VP2666 e64b217215058ea437565771e73905a0 323 Pfam PF00571 CBS domain 211 258 1.2E-4 T 22-04-2016 IPR000644 CBS domain VP2666 e64b217215058ea437565771e73905a0 323 Pfam PF00571 CBS domain 268 320 1.2E-6 T 22-04-2016 IPR000644 CBS domain VP2666 e64b217215058ea437565771e73905a0 323 Gene3D G3DSA:3.10.580.10 192 320 1.4E-37 T 22-04-2016 VP2666 e64b217215058ea437565771e73905a0 323 PANTHER PTHR38418:SF1 9 205 1.2E-40 T 22-04-2016 VP2666 e64b217215058ea437565771e73905a0 323 PANTHER PTHR38418 9 205 1.2E-40 T 22-04-2016 VP2666 e64b217215058ea437565771e73905a0 323 SUPERFAMILY SSF53697 9 282 3.78E-69 T 22-04-2016 VP2666 e64b217215058ea437565771e73905a0 323 SMART SM00116 275 322 4.4 T 22-04-2016 IPR000644 CBS domain VP2666 e64b217215058ea437565771e73905a0 323 SMART SM00116 210 258 0.72 T 22-04-2016 IPR000644 CBS domain VP2666 e64b217215058ea437565771e73905a0 323 PIRSF PIRSF004692 1 323 6.5E-132 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VP2666 e64b217215058ea437565771e73905a0 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.5E-112 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VP2666 e64b217215058ea437565771e73905a0 323 SUPERFAMILY SSF54631 262 320 5.65E-8 T 22-04-2016 VP2666 e64b217215058ea437565771e73905a0 323 Pfam PF01380 SIS domain 41 172 5.1E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 SUPERFAMILY SSF161098 37 63 2.86E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 SUPERFAMILY SSF161098 170 416 2.86E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 PANTHER PTHR30193:SF8 185 425 8.8E-129 T 22-04-2016 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 PANTHER PTHR30193:SF8 13 81 8.8E-129 T 22-04-2016 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 412 7.6E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 PANTHER PTHR30193 185 425 8.8E-129 T 22-04-2016 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 PANTHER PTHR30193 13 81 8.8E-129 T 22-04-2016 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 Gene3D G3DSA:1.10.3720.10 172 415 4.9E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1337 a8d75e4858bb4e6f798acc35faf71740 426 Gene3D G3DSA:1.10.3720.10 31 81 4.9E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1722 3601af1386e7ce47f6c6f02e9d8ea94b 181 PANTHER PTHR23091 13 146 7.3E-12 T 22-04-2016 VP1722 3601af1386e7ce47f6c6f02e9d8ea94b 181 SUPERFAMILY SSF55729 27 146 1.15E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1722 3601af1386e7ce47f6c6f02e9d8ea94b 181 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 27 180 2.4E-69 T 22-04-2016 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178|UniPathway: UPA00067 VP1722 3601af1386e7ce47f6c6f02e9d8ea94b 181 Gene3D G3DSA:3.40.630.30 25 179 2.7E-66 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1722 3601af1386e7ce47f6c6f02e9d8ea94b 181 Pfam PF00583 Acetyltransferase (GNAT) family 71 146 5.4E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP1186 a273842bc1d4dbc1e3ad3c0aef0f0b78 230 SUPERFAMILY SSF55120 2 198 1.6E-47 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1186 a273842bc1d4dbc1e3ad3c0aef0f0b78 230 PANTHER PTHR11079:SF62 3 218 1.7E-114 T 22-04-2016 VP1186 a273842bc1d4dbc1e3ad3c0aef0f0b78 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.2E-108 T 22-04-2016 IPR006508 Pseudouridine synthase, RluA-like KEGG: 00627+5.4.99.- VP1186 a273842bc1d4dbc1e3ad3c0aef0f0b78 230 PANTHER PTHR11079 3 218 1.7E-114 T 22-04-2016 VP1186 a273842bc1d4dbc1e3ad3c0aef0f0b78 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1186 a273842bc1d4dbc1e3ad3c0aef0f0b78 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 4.5E-27 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1159 464b4fa0a28b5d33be2540ad99940bf6 270 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 9.1E-71 T 22-04-2016 IPR005226 UPF0014 family VP1159 464b4fa0a28b5d33be2540ad99940bf6 270 PANTHER PTHR30028 1 242 1.7E-57 T 22-04-2016 VP1159 464b4fa0a28b5d33be2540ad99940bf6 270 PANTHER PTHR30028:SF0 1 242 1.7E-57 T 22-04-2016 IPR005226 UPF0014 family VP0103 cedb2bcfa575e614d6620a16b7d14aaa 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.2E-70 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VP0103 cedb2bcfa575e614d6620a16b7d14aaa 253 Pfam PF01026 TatD related DNase 2 252 1.6E-64 T 22-04-2016 IPR001130 TatD family GO:0016788 VP0103 cedb2bcfa575e614d6620a16b7d14aaa 253 PANTHER PTHR10060:SF21 1 252 2.0E-147 T 22-04-2016 VP0103 cedb2bcfa575e614d6620a16b7d14aaa 253 PANTHER PTHR10060 1 252 2.0E-147 T 22-04-2016 IPR001130 TatD family GO:0016788 VP0103 cedb2bcfa575e614d6620a16b7d14aaa 253 Gene3D G3DSA:3.20.20.140 1 253 3.8E-78 T 22-04-2016 VP0103 cedb2bcfa575e614d6620a16b7d14aaa 253 PIRSF PIRSF005902 1 253 1.7E-70 T 22-04-2016 IPR001130 TatD family GO:0016788 VP0103 cedb2bcfa575e614d6620a16b7d14aaa 253 SUPERFAMILY SSF51556 1 253 2.1E-80 T 22-04-2016 IPR032466 Metal-dependent hydrolase VP3060 5d751ce869ddb5e95d53b23260670d67 312 Gene3D G3DSA:3.20.10.10 134 295 3.3E-59 T 22-04-2016 VP3060 5d751ce869ddb5e95d53b23260670d67 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VP3060 5d751ce869ddb5e95d53b23260670d67 312 Gene3D G3DSA:3.30.470.10 7 130 7.1E-42 T 22-04-2016 VP3060 5d751ce869ddb5e95d53b23260670d67 312 PANTHER PTHR11825 1 306 1.4E-126 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VP3060 5d751ce869ddb5e95d53b23260670d67 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 4.2E-142 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 VP3060 5d751ce869ddb5e95d53b23260670d67 312 SUPERFAMILY SSF56752 7 307 1.7E-102 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VP3060 5d751ce869ddb5e95d53b23260670d67 312 PANTHER PTHR11825:SF7 1 306 1.4E-126 T 22-04-2016 VP3060 5d751ce869ddb5e95d53b23260670d67 312 Pfam PF01063 Amino-transferase class IV 36 268 2.3E-44 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VP2311 09f130a58c83c473fd97e1ed487df524 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 8.8E-136 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VP2311 09f130a58c83c473fd97e1ed487df524 452 Gene3D G3DSA:2.30.42.10 202 291 3.1E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP2311 09f130a58c83c473fd97e1ed487df524 452 Gene3D G3DSA:2.30.42.10 95 187 8.6E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP2311 09f130a58c83c473fd97e1ed487df524 452 PANTHER PTHR22939 130 452 5.5E-95 T 22-04-2016 VP2311 09f130a58c83c473fd97e1ed487df524 452 SMART SM00228 115 186 0.43 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP2311 09f130a58c83c473fd97e1ed487df524 452 SMART SM00228 212 281 3.2E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP2311 09f130a58c83c473fd97e1ed487df524 452 SUPERFAMILY SSF50156 210 294 1.71E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP2311 09f130a58c83c473fd97e1ed487df524 452 SUPERFAMILY SSF50156 89 185 4.47E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP2311 09f130a58c83c473fd97e1ed487df524 452 PANTHER PTHR22939:SF78 130 452 5.5E-95 T 22-04-2016 VP2311 09f130a58c83c473fd97e1ed487df524 452 Pfam PF02163 Peptidase family M50 11 440 2.9E-87 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 VP2311 09f130a58c83c473fd97e1ed487df524 452 Pfam PF13180 PDZ domain 226 288 3.3E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP3025 aba0f211f0af460f196e54bc73e18e2a 260 SUPERFAMILY SSF69572 2 251 6.8E-75 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VP3025 aba0f211f0af460f196e54bc73e18e2a 260 PANTHER PTHR10953:SF158 2 251 1.1E-97 T 22-04-2016 VP3025 aba0f211f0af460f196e54bc73e18e2a 260 Pfam PF00899 ThiF family 10 247 2.2E-58 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VP3025 aba0f211f0af460f196e54bc73e18e2a 260 Gene3D G3DSA:3.40.50.720 3 251 7.9E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain VP3025 aba0f211f0af460f196e54bc73e18e2a 260 PANTHER PTHR10953 2 251 1.1E-97 T 22-04-2016 VP3025 aba0f211f0af460f196e54bc73e18e2a 260 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 9 214 4.3E-89 T 22-04-2016 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 PANTHER PTHR33308:SF3 11 301 2.2E-38 T 22-04-2016 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 SMART SM00047 146 307 6.2E-49 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 Pfam PF10135 Rod binding protein 53 102 3.3E-15 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal VP0784 1f4e8a9ab739f5f3492005286b86436d 308 PANTHER PTHR33308 11 301 2.2E-38 T 22-04-2016 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 Gene3D G3DSA:1.10.530.10 148 206 9.0E-5 T 22-04-2016 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 169 305 2.7E-21 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 305 4.7E-129 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- VP0784 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.8E-28 T 22-04-2016 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 182 200 1.8E-28 T 22-04-2016 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.8E-28 T 22-04-2016 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 245 266 1.8E-28 T 22-04-2016 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 288 306 1.8E-28 T 22-04-2016 VP0784 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 223 244 1.8E-28 T 22-04-2016 VP2442 ea269a332cc9a366450637672eb827f4 132 Pfam PF03603 DNA polymerase III psi subunit 4 130 2.7E-40 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2442 ea269a332cc9a366450637672eb827f4 132 PIRSF PIRSF029225 2 132 8.7E-49 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2442 ea269a332cc9a366450637672eb827f4 132 Gene3D G3DSA:3.40.50.10220 31 131 1.1E-39 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2442 ea269a332cc9a366450637672eb827f4 132 SUPERFAMILY SSF102220 30 131 4.71E-33 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP2442 ea269a332cc9a366450637672eb827f4 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 128 3.0E-6 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VP1603 47fa2b0d38d0fdbeb622de4b9fa40e5d 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 2.5E-28 T 22-04-2016 IPR021363 Protein of unknown function DUF2835 VP0113 d36beefbd362787cb90560d197bc8fa6 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 1.8E-45 T 22-04-2016 IPR007336 Der GTPase activator VP0113 d36beefbd362787cb90560d197bc8fa6 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.885 T 22-04-2016 IPR007336 Der GTPase activator VP1493 f569a6453782c6287d6f396836f655ff 249 PANTHER PTHR21392:SF1 1 244 3.4E-96 T 22-04-2016 VP1493 f569a6453782c6287d6f396836f655ff 249 SMART SM01144 27 227 2.1E-59 T 22-04-2016 IPR005636 DTW VP1493 f569a6453782c6287d6f396836f655ff 249 PANTHER PTHR21392 1 244 3.4E-96 T 22-04-2016 VP1493 f569a6453782c6287d6f396836f655ff 249 Pfam PF03942 DTW domain 29 221 5.2E-39 T 22-04-2016 IPR005636 DTW VP0527 3dc0476756d33b1c6e22dc315deab4f3 296 Gene3D G3DSA:1.10.10.10 3 81 2.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0527 3dc0476756d33b1c6e22dc315deab4f3 296 Pfam PF03466 LysR substrate binding domain 96 288 6.2E-13 T 22-04-2016 IPR005119 LysR, substrate-binding VP0527 3dc0476756d33b1c6e22dc315deab4f3 296 SUPERFAMILY SSF46785 2 85 1.03E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0527 3dc0476756d33b1c6e22dc315deab4f3 296 PANTHER PTHR30293 2 296 5.3E-193 T 22-04-2016 VP0527 3dc0476756d33b1c6e22dc315deab4f3 296 SUPERFAMILY SSF53850 90 288 7.19E-26 T 22-04-2016 VP0527 3dc0476756d33b1c6e22dc315deab4f3 296 PANTHER PTHR30293:SF2 2 296 5.3E-193 T 22-04-2016 VP0527 3dc0476756d33b1c6e22dc315deab4f3 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP0527 3dc0476756d33b1c6e22dc315deab4f3 296 Gene3D G3DSA:3.40.190.10 97 228 2.5E-8 T 22-04-2016 VP2729 a62113938c9df315730818a1c9f30bd3 154 Pfam PF01475 Ferric uptake regulator family 19 138 1.4E-19 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VP2729 a62113938c9df315730818a1c9f30bd3 154 SUPERFAMILY SSF46785 11 144 2.2E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2729 a62113938c9df315730818a1c9f30bd3 154 PANTHER PTHR33202:SF6 8 149 5.1E-65 T 22-04-2016 VP2729 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:1.10.10.10 11 83 3.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2729 a62113938c9df315730818a1c9f30bd3 154 PANTHER PTHR33202 8 149 5.1E-65 T 22-04-2016 VP1998 5d79da89d4277a01e413f8dc5f17a75f 423 SUPERFAMILY SSF56954 6 412 1.11E-77 T 22-04-2016 VP1998 5d79da89d4277a01e413f8dc5f17a75f 423 PANTHER PTHR30026 9 419 4.4E-55 T 22-04-2016 VP1998 5d79da89d4277a01e413f8dc5f17a75f 423 Pfam PF02321 Outer membrane efflux protein 228 407 4.3E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP1998 5d79da89d4277a01e413f8dc5f17a75f 423 Pfam PF02321 Outer membrane efflux protein 28 204 1.9E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP1998 5d79da89d4277a01e413f8dc5f17a75f 423 Gene3D G3DSA:1.20.1600.10 23 411 2.5E-64 T 22-04-2016 VP1998 5d79da89d4277a01e413f8dc5f17a75f 423 PANTHER PTHR30026:SF7 9 419 4.4E-55 T 22-04-2016 VP2875 6bc0dd200524ccd2dda92ef092d18a7a 396 PIRSF PIRSF004925 1 386 2.7E-104 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter VP2875 6bc0dd200524ccd2dda92ef092d18a7a 396 Pfam PF12832 MFS_1 like family 13 361 6.9E-39 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain VP2875 6bc0dd200524ccd2dda92ef092d18a7a 396 PANTHER PTHR23522:SF3 1 396 9.8E-138 T 22-04-2016 VP2875 6bc0dd200524ccd2dda92ef092d18a7a 396 SUPERFAMILY SSF103473 8 373 2.09E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP2875 6bc0dd200524ccd2dda92ef092d18a7a 396 PANTHER PTHR23522 1 396 9.8E-138 T 22-04-2016 VP2875 6bc0dd200524ccd2dda92ef092d18a7a 396 Gene3D G3DSA:1.20.1250.20 13 184 5.2E-15 T 22-04-2016 VP2875 6bc0dd200524ccd2dda92ef092d18a7a 396 Gene3D G3DSA:1.20.1250.20 199 375 3.1E-19 T 22-04-2016 VP1540 ef560a6ea607a463d9fa859b4c35eb82 158 Pfam PF05751 FixH 7 147 3.0E-40 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH VP0250 454424b040fe1c8e797851b5a3d15c65 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.6E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VP0250 454424b040fe1c8e797851b5a3d15c65 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.13 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VP0250 454424b040fe1c8e797851b5a3d15c65 183 SUPERFAMILY SSF56235 2 172 6.92E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0250 454424b040fe1c8e797851b5a3d15c65 183 PIRSF PIRSF039093 1 175 1.2E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VP0250 454424b040fe1c8e797851b5a3d15c65 183 Gene3D G3DSA:3.60.20.10 2 173 1.1E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP0250 454424b040fe1c8e797851b5a3d15c65 183 PANTHER PTHR32194 2 173 4.5E-127 T 22-04-2016 VP0250 454424b040fe1c8e797851b5a3d15c65 183 Pfam PF00227 Proteasome subunit 2 169 8.0E-24 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 VP0991 6fe9e7213358bf838a8156fccf88260d 222 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 205 1.1E-7 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 VP1282 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 22-04-2016 VP1282 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 7.8E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VP1282 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VP1282 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VP1282 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VP1282 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VP1282 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VP1282 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 55 117 1.1E-30 T 22-04-2016 VP1282 070ac683e597a207494e9cfb26acddbf 117 PANTHER PTHR10986 2 117 9.2E-67 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VP1282 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 22-04-2016 VP1282 070ac683e597a207494e9cfb26acddbf 117 PANTHER PTHR10986:SF12 2 117 9.2E-67 T 22-04-2016 VP1282 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VP0900 ce76eccf9a8505cca8c7006ee4f4186f 414 PANTHER PTHR10617:SF113 7 410 1.4E-122 T 22-04-2016 VP0900 ce76eccf9a8505cca8c7006ee4f4186f 414 PANTHER PTHR10617 7 410 1.4E-122 T 22-04-2016 VP0900 ce76eccf9a8505cca8c7006ee4f4186f 414 Pfam PF01494 FAD binding domain 7 164 1.5E-15 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VP0900 ce76eccf9a8505cca8c7006ee4f4186f 414 Gene3D G3DSA:3.50.50.60 281 324 1.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0900 ce76eccf9a8505cca8c7006ee4f4186f 414 Gene3D G3DSA:3.50.50.60 2 180 1.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0900 ce76eccf9a8505cca8c7006ee4f4186f 414 SUPERFAMILY SSF51905 285 388 2.59E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0900 ce76eccf9a8505cca8c7006ee4f4186f 414 SUPERFAMILY SSF51905 4 175 2.59E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0781 80e68b11842c5dc18288dd8d11b271f7 262 SUPERFAMILY SSF117143 93 223 6.67E-35 T 22-04-2016 VP0781 80e68b11842c5dc18288dd8d11b271f7 262 PANTHER PTHR30435:SF19 1 262 1.4E-134 T 22-04-2016 VP0781 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.5E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VP0781 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 8.0E-118 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VP0781 80e68b11842c5dc18288dd8d11b271f7 262 PANTHER PTHR30435 1 262 1.4E-134 T 22-04-2016 VP0781 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 8.9E-24 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VP0781 80e68b11842c5dc18288dd8d11b271f7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VP0781 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.6E-30 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VP0781 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.4E-41 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VP1617 4df935779c69a7777ec99474ad9074a0 160 PANTHER PTHR30476 1 160 2.3E-89 T 22-04-2016 VP1617 4df935779c69a7777ec99474ad9074a0 160 SUPERFAMILY SSF89963 88 160 7.32E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VP1617 4df935779c69a7777ec99474ad9074a0 160 Gene3D G3DSA:3.30.70.860 95 160 2.1E-34 T 22-04-2016 VP1617 4df935779c69a7777ec99474ad9074a0 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 8.1E-65 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VP1617 4df935779c69a7777ec99474ad9074a0 160 SUPERFAMILY SSF89963 2 86 7.59E-31 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VP1617 4df935779c69a7777ec99474ad9074a0 160 PANTHER PTHR30476:SF0 1 160 2.3E-89 T 22-04-2016 VP1617 4df935779c69a7777ec99474ad9074a0 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.761 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VP1617 4df935779c69a7777ec99474ad9074a0 160 Gene3D G3DSA:3.30.70.990 9 94 2.0E-31 T 22-04-2016 VP1913 8170d4628cc02ecb3015a29bd82a9530 221 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 1.7E-61 T 22-04-2016 IPR021367 Protein of unknown function DUF2982 VPA0130 bc3d62df1aef5e6978e6cd5f43746510 204 SUPERFAMILY SSF51556 3 202 1.13E-55 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPA0130 bc3d62df1aef5e6978e6cd5f43746510 204 Pfam PF00962 Adenosine/AMP deaminase 2 202 4.1E-58 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 VPA0130 bc3d62df1aef5e6978e6cd5f43746510 204 Gene3D G3DSA:3.20.20.140 2 203 6.1E-66 T 22-04-2016 VPA0130 bc3d62df1aef5e6978e6cd5f43746510 204 PANTHER PTHR11409 1 204 5.6E-67 T 22-04-2016 VPA0130 bc3d62df1aef5e6978e6cd5f43746510 204 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 2 202 1.6E-80 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 VP1215 1679da02845d44c73caeebf6a56380e7 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 8.8E-48 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VP1215 1679da02845d44c73caeebf6a56380e7 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VP1215 1679da02845d44c73caeebf6a56380e7 233 Gene3D G3DSA:3.10.290.10 1 63 2.1E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP1215 1679da02845d44c73caeebf6a56380e7 233 SUPERFAMILY SSF55174 1 85 1.05E-14 T 22-04-2016 VP1215 1679da02845d44c73caeebf6a56380e7 233 PANTHER PTHR21600 1 233 1.3E-70 T 22-04-2016 VP1215 1679da02845d44c73caeebf6a56380e7 233 SUPERFAMILY SSF55120 60 228 4.0E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1215 1679da02845d44c73caeebf6a56380e7 233 Pfam PF01479 S4 domain 1 46 1.0E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP1215 1679da02845d44c73caeebf6a56380e7 233 PANTHER PTHR21600:SF19 1 233 1.3E-70 T 22-04-2016 VP1215 1679da02845d44c73caeebf6a56380e7 233 SMART SM00363 1 59 2.7E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VP1215 1679da02845d44c73caeebf6a56380e7 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 2.1E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 Gene3D G3DSA:3.40.50.1100 104 192 5.4E-13 T 22-04-2016 VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 366 5.9E-24 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 PANTHER PTHR10314:SF1 25 426 2.0E-136 T 22-04-2016 VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 Gene3D G3DSA:3.90.1380.10 1 82 3.3E-17 T 22-04-2016 IPR029144 Threonine synthase, N-terminal VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 PANTHER PTHR10314 25 426 2.0E-136 T 22-04-2016 VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 SUPERFAMILY SSF53686 1 424 3.14E-132 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 Gene3D G3DSA:3.40.50.1100 193 315 2.3E-53 T 22-04-2016 VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 Gene3D G3DSA:3.40.50.1100 322 399 1.1E-15 T 22-04-2016 VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 Pfam PF14821 Threonine synthase N terminus 8 78 3.6E-8 T 22-04-2016 IPR029144 Threonine synthase, N-terminal VP0496 dc14537d5ecd6cbeb35ce69150f036ac 426 TIGRFAM TIGR00260 thrC: threonine synthase 51 388 1.1E-114 T 22-04-2016 IPR004450 Threonine synthase-like VP0219 1281aebac5aa4a8286d6db672d3488de 188 Gene3D G3DSA:2.40.160.20 27 188 1.7E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0219 1281aebac5aa4a8286d6db672d3488de 188 SUPERFAMILY SSF56925 41 188 1.41E-18 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0219 1281aebac5aa4a8286d6db672d3488de 188 Pfam PF13505 Outer membrane protein beta-barrel domain 28 188 6.0E-16 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VPA0220 537e95908aa159a57b4f722952b2fe70 183 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 1 56 2.2E-12 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 VPA0220 537e95908aa159a57b4f722952b2fe70 183 PANTHER PTHR23417:SF2 34 182 9.3E-44 T 22-04-2016 VPA0220 537e95908aa159a57b4f722952b2fe70 183 SUPERFAMILY SSF53756 20 140 1.65E-6 T 22-04-2016 VPA0220 537e95908aa159a57b4f722952b2fe70 183 PANTHER PTHR23417 34 182 9.3E-44 T 22-04-2016 VP1626 66362b991488fac257a7cc095e1fa296 109 PIRSF PIRSF006223 2 109 3.0E-40 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VP1626 66362b991488fac257a7cc095e1fa296 109 SUPERFAMILY SSF69721 2 109 6.67E-41 T 22-04-2016 IPR025526 DsrC-like domain VP1626 66362b991488fac257a7cc095e1fa296 109 PANTHER PTHR37010:SF1 1 109 5.2E-57 T 22-04-2016 VP1626 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:1.10.10.370 40 109 6.4E-36 T 22-04-2016 VP1626 66362b991488fac257a7cc095e1fa296 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.6E-49 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VP1626 66362b991488fac257a7cc095e1fa296 109 PANTHER PTHR37010 1 109 5.2E-57 T 22-04-2016 VP1626 66362b991488fac257a7cc095e1fa296 109 Pfam PF04358 DsrC like protein 4 109 1.1E-43 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VP1626 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:3.30.1420.10 3 39 2.9E-12 T 22-04-2016 VP1340 4022dce1ac5414ea88179074ff93ee8b 814 SMART SM00089 611 693 2.7E-23 T 22-04-2016 IPR022409 PKD/Chitinase domain VP1340 4022dce1ac5414ea88179074ff93ee8b 814 Pfam PF00801 PKD domain 622 681 1.2E-12 T 22-04-2016 IPR000601 PKD domain VP1340 4022dce1ac5414ea88179074ff93ee8b 814 Pfam PF08453 Peptidase family M9 N-terminal 78 258 6.3E-56 T 22-04-2016 IPR013661 Peptidase M9, collagenase, N-terminal domain VP1340 4022dce1ac5414ea88179074ff93ee8b 814 Pfam PF01752 Collagenase 317 600 1.3E-108 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VP1340 4022dce1ac5414ea88179074ff93ee8b 814 PANTHER PTHR13062 64 606 4.1E-13 T 22-04-2016 VP1340 4022dce1ac5414ea88179074ff93ee8b 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VP1340 4022dce1ac5414ea88179074ff93ee8b 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 476 494 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VP1340 4022dce1ac5414ea88179074ff93ee8b 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 449 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VP1340 4022dce1ac5414ea88179074ff93ee8b 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 415 429 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VP1340 4022dce1ac5414ea88179074ff93ee8b 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 498 513 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VP1340 4022dce1ac5414ea88179074ff93ee8b 814 SUPERFAMILY SSF49299 609 691 1.7E-21 T 22-04-2016 IPR000601 PKD domain VP1340 4022dce1ac5414ea88179074ff93ee8b 814 Gene3D G3DSA:2.60.40.670 609 692 2.2E-21 T 22-04-2016 IPR000601 PKD domain VPA1111 d63e3be02d545d3b1811127d950f5571 312 Gene3D G3DSA:3.90.1150.10 1 50 1.2E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPA1111 d63e3be02d545d3b1811127d950f5571 312 SUPERFAMILY SSF53383 1 311 3.6E-109 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPA1111 d63e3be02d545d3b1811127d950f5571 312 Gene3D G3DSA:3.40.640.10 51 311 1.0E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPA1111 d63e3be02d545d3b1811127d950f5571 312 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 2 312 4.2E-147 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VPA1111 d63e3be02d545d3b1811127d950f5571 312 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 231 268 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPA1111 d63e3be02d545d3b1811127d950f5571 312 PANTHER PTHR11986:SF8 1 312 3.1E-161 T 22-04-2016 VPA1111 d63e3be02d545d3b1811127d950f5571 312 PANTHER PTHR11986 1 312 3.1E-161 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPA1111 d63e3be02d545d3b1811127d950f5571 312 Pfam PF00202 Aminotransferase class-III 16 311 1.4E-104 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VP1991 716179165891451ecd240d68882b8418 342 SUPERFAMILY SSF51726 3 338 3.01E-70 T 22-04-2016 VP1991 716179165891451ecd240d68882b8418 342 PIRSF PIRSF005632 1 342 8.4E-196 T 22-04-2016 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VP1991 716179165891451ecd240d68882b8418 342 Gene3D G3DSA:3.20.20.210 2 341 1.1E-91 T 22-04-2016 VP1991 716179165891451ecd240d68882b8418 342 PANTHER PTHR30519 235 342 9.9E-104 T 22-04-2016 VP1991 716179165891451ecd240d68882b8418 342 PANTHER PTHR30519 4 216 9.9E-104 T 22-04-2016 VP1991 716179165891451ecd240d68882b8418 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 2.5E-37 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VP1035 263522781bc68efe58322db0cdb0f950 445 PIRSF PIRSF018282 1 445 1.3E-247 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VP1035 263522781bc68efe58322db0cdb0f950 445 Pfam PF03882 MukF winged-helix domain 10 122 2.9E-53 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain VP1035 263522781bc68efe58322db0cdb0f950 445 Gene3D G3DSA:1.10.10.10 29 123 1.4E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1035 263522781bc68efe58322db0cdb0f950 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.428 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VP1035 263522781bc68efe58322db0cdb0f950 445 SUPERFAMILY SSF46785 13 123 2.24E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1035 263522781bc68efe58322db0cdb0f950 445 Pfam PF17193 MukF C-terminal domain 288 445 1.1E-77 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain VP1035 263522781bc68efe58322db0cdb0f950 445 Pfam PF17192 MukF middle domain 126 286 2.1E-78 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VP1035 263522781bc68efe58322db0cdb0f950 445 SUPERFAMILY SSF140570 124 286 3.79E-76 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VP0886 bb411fe7371e4d3977de234740501def 780 SUPERFAMILY SSF82866 228 408 6.02E-21 T 22-04-2016 VP0886 bb411fe7371e4d3977de234740501def 780 Gene3D G3DSA:1.20.1640.10 240 408 9.6E-17 T 22-04-2016 VP0886 bb411fe7371e4d3977de234740501def 780 Gene3D G3DSA:1.20.1640.10 635 769 5.4E-10 T 22-04-2016 VP0886 bb411fe7371e4d3977de234740501def 780 Pfam PF03176 MMPL family 72 414 8.2E-12 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VP0886 bb411fe7371e4d3977de234740501def 780 SUPERFAMILY SSF82866 601 771 1.15E-20 T 22-04-2016 VP1931 1d04de1925fb95911cd0af44f0f4604d 235 Gene3D G3DSA:1.25.40.10 103 146 6.8E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1931 1d04de1925fb95911cd0af44f0f4604d 235 Gene3D G3DSA:1.25.40.10 147 234 8.7E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1931 1d04de1925fb95911cd0af44f0f4604d 235 SUPERFAMILY SSF48452 102 208 6.07E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1487 b13080d9859a15fdc6add23e29d8e7cb 139 Pfam PF00293 NUDIX domain 6 128 1.4E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VP1487 b13080d9859a15fdc6add23e29d8e7cb 139 PANTHER PTHR22769:SF33 7 127 5.9E-13 T 22-04-2016 VP1487 b13080d9859a15fdc6add23e29d8e7cb 139 SUPERFAMILY SSF55811 7 126 7.18E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP1487 b13080d9859a15fdc6add23e29d8e7cb 139 PANTHER PTHR22769 7 127 5.9E-13 T 22-04-2016 VP1487 b13080d9859a15fdc6add23e29d8e7cb 139 Gene3D G3DSA:3.90.79.10 5 126 4.6E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP1487 b13080d9859a15fdc6add23e29d8e7cb 139 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.9E-5 T 22-04-2016 IPR020476 NUDIX hydrolase VP1487 b13080d9859a15fdc6add23e29d8e7cb 139 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.9E-5 T 22-04-2016 IPR020476 NUDIX hydrolase VP0243 5ba475130f53838003ba504de2d0db6b 204 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 5.5E-6 T 22-04-2016 VP0243 5ba475130f53838003ba504de2d0db6b 204 PANTHER PTHR30363:SF9 1 204 6.8E-97 T 22-04-2016 VP0243 5ba475130f53838003ba504de2d0db6b 204 Gene3D G3DSA:1.10.10.10 6 99 1.4E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0243 5ba475130f53838003ba504de2d0db6b 204 PANTHER PTHR30363 1 204 6.8E-97 T 22-04-2016 VP0243 5ba475130f53838003ba504de2d0db6b 204 SUPERFAMILY SSF46785 5 183 2.15E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0780 164f874138b3d929c22221d2ccb24cd4 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.4E-33 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VP0780 164f874138b3d929c22221d2ccb24cd4 249 SUPERFAMILY SSF117143 77 207 9.42E-16 T 22-04-2016 VP0780 164f874138b3d929c22221d2ccb24cd4 249 PANTHER PTHR30435:SF18 1 249 2.0E-104 T 22-04-2016 VP0780 164f874138b3d929c22221d2ccb24cd4 249 Pfam PF00460 Flagella basal body rod protein 8 35 1.9E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VP0780 164f874138b3d929c22221d2ccb24cd4 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 6.5E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VP0780 164f874138b3d929c22221d2ccb24cd4 249 PANTHER PTHR30435 1 249 2.0E-104 T 22-04-2016 VP0417 4362ed51527e47f5fa2de35a106f4bc8 203 PIRSF PIRSF006158 1 203 7.3E-71 T 22-04-2016 IPR016476 SH3 domain protein VP0417 4362ed51527e47f5fa2de35a106f4bc8 203 SMART SM00287 20 86 9.7E-11 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type VP0417 4362ed51527e47f5fa2de35a106f4bc8 203 Pfam PF08239 Bacterial SH3 domain 33 82 1.4E-9 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type VP0417 4362ed51527e47f5fa2de35a106f4bc8 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 1.7E-53 T 22-04-2016 IPR016476 SH3 domain protein VP1368 0dae734b8bdbe7865bf2063cf7330a14 215 Pfam PF13847 Methyltransferase domain 51 173 2.2E-16 T 22-04-2016 IPR025714 Methyltransferase domain VP1368 0dae734b8bdbe7865bf2063cf7330a14 215 SUPERFAMILY SSF53335 3 198 3.47E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1368 0dae734b8bdbe7865bf2063cf7330a14 215 PANTHER PTHR10108:SF877 3 191 2.9E-18 T 22-04-2016 VP1368 0dae734b8bdbe7865bf2063cf7330a14 215 PANTHER PTHR10108 3 191 2.9E-18 T 22-04-2016 VP1368 0dae734b8bdbe7865bf2063cf7330a14 215 Gene3D G3DSA:3.40.50.150 40 200 4.1E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 Pfam PF01019 Gamma-glutamyltranspeptidase 66 581 3.4E-163 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 52 578 2.6E-139 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 298 317 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 268 284 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 166 185 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 489 506 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 166 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 465 480 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 73 98 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 447 3.9E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PANTHER PTHR11686:SF27 31 585 1.7E-275 T 22-04-2016 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 PANTHER PTHR11686 31 585 1.7E-275 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VP3011 23f6a43bdb0af4048ee955e9f40b3b7a 586 SUPERFAMILY SSF56235 43 585 1.54E-176 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VP1830 26f5f2d0286114e83ff3da508d7faf2f 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 7.8E-16 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VP1830 26f5f2d0286114e83ff3da508d7faf2f 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 1.0E-13 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VP1830 26f5f2d0286114e83ff3da508d7faf2f 92 PANTHER PTHR33755 1 91 6.5E-37 T 22-04-2016 VP1830 26f5f2d0286114e83ff3da508d7faf2f 92 PANTHER PTHR33755:SF6 1 91 6.5E-37 T 22-04-2016 VP0729 0217602cd15a3b1fed2a6c754340c736 505 PANTHER PTHR38686 1 505 2.9E-118 T 22-04-2016 VP0729 0217602cd15a3b1fed2a6c754340c736 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 7.4E-99 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 VP0729 0217602cd15a3b1fed2a6c754340c736 505 SUPERFAMILY SSF56317 213 486 7.85E-41 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0729 0217602cd15a3b1fed2a6c754340c736 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.633 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 VP0729 0217602cd15a3b1fed2a6c754340c736 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 6.8E-37 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0729 0217602cd15a3b1fed2a6c754340c736 505 Gene3D G3DSA:3.60.110.10 215 483 1.4E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0213 be1df04805ed0c51adb1c89e380a1508 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 6.7E-109 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VP0213 be1df04805ed0c51adb1c89e380a1508 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 48.641 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VP0213 be1df04805ed0c51adb1c89e380a1508 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 4.5E-77 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP0213 be1df04805ed0c51adb1c89e380a1508 329 PIRSF PIRSF026649 12 313 2.4E-80 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP0213 be1df04805ed0c51adb1c89e380a1508 329 PANTHER PTHR30606 12 311 2.9E-130 T 22-04-2016 VP0213 be1df04805ed0c51adb1c89e380a1508 329 PANTHER PTHR30606:SF4 12 311 2.9E-130 T 22-04-2016 VP1639 e731a81e0c5d50f0e722483821ebab05 222 Gene3D G3DSA:3.20.20.70 28 121 1.2E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1639 e731a81e0c5d50f0e722483821ebab05 222 Pfam PF13394 4Fe-4S single cluster domain 23 130 1.9E-11 T 22-04-2016 VP1639 e731a81e0c5d50f0e722483821ebab05 222 SUPERFAMILY SSF102114 27 121 1.14E-6 T 22-04-2016 VP1639 e731a81e0c5d50f0e722483821ebab05 222 PANTHER PTHR11228:SF6 1 52 9.0E-49 T 22-04-2016 VP1639 e731a81e0c5d50f0e722483821ebab05 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 7.9E-112 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VP1639 e731a81e0c5d50f0e722483821ebab05 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 34.495 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VP1639 e731a81e0c5d50f0e722483821ebab05 222 PIRSF PIRSF000370 1 222 1.1E-71 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VP1639 e731a81e0c5d50f0e722483821ebab05 222 PANTHER PTHR11228:SF6 69 221 9.0E-49 T 22-04-2016 VP1639 e731a81e0c5d50f0e722483821ebab05 222 PANTHER PTHR11228 1 52 9.0E-49 T 22-04-2016 VP1639 e731a81e0c5d50f0e722483821ebab05 222 PANTHER PTHR11228 69 221 9.0E-49 T 22-04-2016 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 2.5E-61 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 PANTHER PTHR23426 7 112 1.0E-40 T 22-04-2016 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.5E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 SUPERFAMILY SSF54292 5 107 2.22E-32 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VP0601 0f972e050c4e96ab8f77ec61e305e70c 112 Gene3D G3DSA:3.10.20.30 1 101 2.1E-34 T 22-04-2016 IPR012675 Beta-grasp domain VP2933 eab8f38d95187514352366012768be39 152 Pfam PF13673 Acetyltransferase (GNAT) domain 34 118 1.0E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2933 eab8f38d95187514352366012768be39 152 Gene3D G3DSA:3.40.630.30 31 121 2.4E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2933 eab8f38d95187514352366012768be39 152 SUPERFAMILY SSF55729 5 119 5.89E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0147 46b2141b80c350c08d20660737e16a28 241 Pfam PF00156 Phosphoribosyl transferase domain 145 237 2.8E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VP0147 46b2141b80c350c08d20660737e16a28 241 SUPERFAMILY SSF53271 67 239 4.06E-34 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP0147 46b2141b80c350c08d20660737e16a28 241 Gene3D G3DSA:3.40.50.2020 66 237 6.1E-28 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP0147 46b2141b80c350c08d20660737e16a28 241 PANTHER PTHR11907:SF9 13 238 2.2E-52 T 22-04-2016 VP0147 46b2141b80c350c08d20660737e16a28 241 PANTHER PTHR11907 13 238 2.2E-52 T 22-04-2016 VPA0934 1aeb410c8844074f6f99696e306e7a98 204 Gene3D G3DSA:3.40.50.970 1 97 3.5E-15 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPA0934 1aeb410c8844074f6f99696e306e7a98 204 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 2 58 1.1E-7 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VPA0934 1aeb410c8844074f6f99696e306e7a98 204 Pfam PF16582 Middle domain of thiamine pyrophosphate 105 204 1.5E-22 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPA0934 1aeb410c8844074f6f99696e306e7a98 204 PANTHER PTHR18968 1 204 2.0E-57 T 22-04-2016 VPA0934 1aeb410c8844074f6f99696e306e7a98 204 SUPERFAMILY SSF52518 2 93 1.64E-7 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPA0934 1aeb410c8844074f6f99696e306e7a98 204 PANTHER PTHR18968:SF114 1 204 2.0E-57 T 22-04-2016 VP0621 f3923f6144e125e00fb6b2c29cdb84e1 326 Gene3D G3DSA:3.40.50.1000 61 76 2.9E-14 T 22-04-2016 IPR023214 HAD-like domain VP0621 f3923f6144e125e00fb6b2c29cdb84e1 326 Gene3D G3DSA:3.40.50.1000 156 297 2.9E-14 T 22-04-2016 IPR023214 HAD-like domain VP0621 f3923f6144e125e00fb6b2c29cdb84e1 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 63 264 1.2E-18 T 22-04-2016 VP0621 f3923f6144e125e00fb6b2c29cdb84e1 326 SUPERFAMILY SSF56784 61 312 1.95E-23 T 22-04-2016 IPR023214 HAD-like domain VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.8E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 6.7E-223 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 SMART SM00382 49 332 6.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0249 a6f21c20591b6440dafa32dbaf368d24 443 PANTHER PTHR11262:SF3 1 105 4.2E-206 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 PANTHER PTHR11262:SF3 218 443 4.2E-206 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Gene3D G3DSA:3.40.50.300 3 110 4.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Gene3D G3DSA:3.40.50.300 245 331 4.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 8.5E-5 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.16 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 5.6E-43 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Gene3D G3DSA:1.10.8.10 111 177 9.8E-35 T 22-04-2016 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Gene3D G3DSA:1.10.8.10 213 243 9.8E-35 T 22-04-2016 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 Gene3D G3DSA:1.10.8.60 335 443 2.8E-35 T 22-04-2016 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 SUPERFAMILY SSF52540 3 441 1.8E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0249 a6f21c20591b6440dafa32dbaf368d24 443 PANTHER PTHR11262 1 105 4.2E-206 T 22-04-2016 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 PANTHER PTHR11262 218 443 4.2E-206 T 22-04-2016 VP0249 a6f21c20591b6440dafa32dbaf368d24 443 SMART SM01086 335 429 3.4E-20 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VP1590 57590a18dc71f4475bb1517458b13103 545 Gene3D G3DSA:3.30.230.10 305 505 5.0E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP1590 57590a18dc71f4475bb1517458b13103 545 SUPERFAMILY SSF54211 313 505 5.31E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP1590 57590a18dc71f4475bb1517458b13103 545 Pfam PF13654 AAA domain 105 287 6.9E-27 T 22-04-2016 VP1590 57590a18dc71f4475bb1517458b13103 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 313 329 1.1E-10 T 22-04-2016 VP1590 57590a18dc71f4475bb1517458b13103 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 456 474 1.1E-10 T 22-04-2016 VP1590 57590a18dc71f4475bb1517458b13103 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 426 445 1.1E-10 T 22-04-2016 VP1590 57590a18dc71f4475bb1517458b13103 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 396 415 1.1E-10 T 22-04-2016 VP1590 57590a18dc71f4475bb1517458b13103 545 PANTHER PTHR10046:SF49 31 510 7.2E-132 T 22-04-2016 VP1590 57590a18dc71f4475bb1517458b13103 545 PANTHER PTHR10046 31 510 7.2E-132 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VP1590 57590a18dc71f4475bb1517458b13103 545 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 399 503 7.8E-11 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 8.5E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 PANTHER PTHR11985:SF1 3 509 9.3E-191 T 22-04-2016 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 PANTHER PTHR11985 3 509 9.3E-191 T 22-04-2016 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 502 5.0E-11 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 SUPERFAMILY SSF51905 324 385 1.04E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 SUPERFAMILY SSF51905 17 272 1.04E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 Gene3D G3DSA:3.50.50.60 17 316 5.3E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VP2388 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VP0201 f2fd0bcab374c86e53ca763a437a58dd 198 Gene3D G3DSA:2.160.10.10 79 189 3.7E-23 T 22-04-2016 VP0201 f2fd0bcab374c86e53ca763a437a58dd 198 PANTHER PTHR23416:SF23 50 178 1.4E-12 T 22-04-2016 VP0201 f2fd0bcab374c86e53ca763a437a58dd 198 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 2 188 2.5E-51 T 22-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like VP0201 f2fd0bcab374c86e53ca763a437a58dd 198 PANTHER PTHR23416 50 178 1.4E-12 T 22-04-2016 VP0201 f2fd0bcab374c86e53ca763a437a58dd 198 SUPERFAMILY SSF51161 56 193 4.85E-33 T 22-04-2016 IPR011004 Trimeric LpxA-like VP0201 f2fd0bcab374c86e53ca763a437a58dd 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 1.3E-6 T 22-04-2016 IPR001451 Hexapeptide repeat VP0201 f2fd0bcab374c86e53ca763a437a58dd 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 178 3.9E-4 T 22-04-2016 IPR001451 Hexapeptide repeat VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.7E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 Gene3D G3DSA:3.50.50.60 243 395 2.1E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 PANTHER PTHR11938 43 319 4.0E-150 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 PANTHER PTHR11938 335 473 4.0E-150 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 SUPERFAMILY SSF51971 143 407 9.42E-67 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 SUPERFAMILY SSF46548 2 155 2.04E-36 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.5E-197 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 PANTHER PTHR11938:SF75 43 319 4.0E-150 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 PANTHER PTHR11938:SF75 335 473 4.0E-150 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 Gene3D G3DSA:3.50.50.60 146 242 9.7E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 Gene3D G3DSA:3.50.50.60 396 474 4.7E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 Gene3D G3DSA:1.10.1060.10 3 145 5.1E-39 T 22-04-2016 VP0483 72df9fdb7ddfcd0a66d26771a670571e 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 2.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 Gene3D G3DSA:3.90.190.10 84 232 1.9E-26 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 PANTHER PTHR12358:SF43 67 544 4.9E-36 T 22-04-2016 VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 PANTHER PTHR12358 67 544 4.9E-36 T 22-04-2016 VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 SUPERFAMILY SSF111331 241 544 8.01E-54 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 Pfam PF00782 Dual specificity phosphatase, catalytic domain 107 229 2.8E-17 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 Pfam PF00781 Diacylglycerol kinase catalytic domain 242 365 7.9E-28 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 SMART SM00195 90 232 1.7E-14 T 22-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 SMART SM00046 240 363 6.9E-5 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 Gene3D G3DSA:3.40.50.10330 259 356 3.2E-6 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 SUPERFAMILY SSF52799 84 227 8.57E-28 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VP0085 a747413fd2cd45a1e5ad5d2dd68034a1 545 SMART SM00404 135 231 6.3E-4 T 22-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic VP2208 aa21745ea15fe01b640a166d32c4890c 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 5.3E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP2208 aa21745ea15fe01b640a166d32c4890c 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 8.2E-24 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP2208 aa21745ea15fe01b640a166d32c4890c 703 SUPERFAMILY SSF48179 610 703 9.35E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP2208 aa21745ea15fe01b640a166d32c4890c 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 219 1.3E-40 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VP2208 aa21745ea15fe01b640a166d32c4890c 703 SUPERFAMILY SSF48179 494 593 1.02E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP2208 aa21745ea15fe01b640a166d32c4890c 703 Gene3D G3DSA:1.10.1040.10 621 702 7.7E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP2208 aa21745ea15fe01b640a166d32c4890c 703 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP2208 aa21745ea15fe01b640a166d32c4890c 703 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VP2208 aa21745ea15fe01b640a166d32c4890c 703 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP2208 aa21745ea15fe01b640a166d32c4890c 703 SUPERFAMILY SSF52096 2 303 1.92E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2208 aa21745ea15fe01b640a166d32c4890c 703 Gene3D G3DSA:3.90.226.10 2 194 2.1E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2208 aa21745ea15fe01b640a166d32c4890c 703 Gene3D G3DSA:3.90.226.10 232 269 2.1E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2208 aa21745ea15fe01b640a166d32c4890c 703 PANTHER PTHR23309:SF6 7 703 0.0 T 22-04-2016 VP2208 aa21745ea15fe01b640a166d32c4890c 703 PANTHER PTHR23309 7 703 0.0 T 22-04-2016 VP2208 aa21745ea15fe01b640a166d32c4890c 703 SUPERFAMILY SSF51735 310 491 2.03E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2208 aa21745ea15fe01b640a166d32c4890c 703 Gene3D G3DSA:1.10.1040.10 496 588 1.7E-25 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP2208 aa21745ea15fe01b640a166d32c4890c 703 Gene3D G3DSA:3.40.50.720 307 495 9.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2208 aa21745ea15fe01b640a166d32c4890c 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 1.7E-53 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP2208 aa21745ea15fe01b640a166d32c4890c 703 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 52.993 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VP3026 cf32987c18860118e8ef21a1318e971f 444 Gene3D G3DSA:3.20.20.70 224 431 8.5E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP3026 cf32987c18860118e8ef21a1318e971f 444 SUPERFAMILY SSF51391 225 430 8.24E-58 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VP3026 cf32987c18860118e8ef21a1318e971f 444 Pfam PF02581 Thiamine monophosphate synthase/TENI 235 412 1.2E-49 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VP3026 cf32987c18860118e8ef21a1318e971f 444 PANTHER PTHR20857 216 431 4.3E-54 T 22-04-2016 VP1762 a2e302ba55de05c572ad0d3fd478b324 119 SUPERFAMILY SSF142906 3 117 2.88E-39 T 22-04-2016 VP1762 a2e302ba55de05c572ad0d3fd478b324 119 Pfam PF04237 YjbR 15 104 4.3E-26 T 22-04-2016 IPR007351 Uncharacterised protein YjbR VP1762 a2e302ba55de05c572ad0d3fd478b324 119 PANTHER PTHR35145 1 119 1.1E-33 T 22-04-2016 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:3.40.50.300 145 311 9.6E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 PANTHER PTHR32071:SF34 27 444 2.6E-201 T 22-04-2016 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF52540 146 380 4.54E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.6E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:1.10.10.60 384 438 1.0E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 SMART SM00382 166 306 0.0029 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 Pfam PF00158 Sigma-54 interaction domain 146 305 2.4E-37 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF52172 27 190 1.39E-7 T 22-04-2016 IPR011006 CheY-like superfamily VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:1.10.8.60 312 383 1.7E-23 T 22-04-2016 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF46689 352 438 5.38E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 PANTHER PTHR32071 27 444 2.6E-201 T 22-04-2016 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP0514 4f82e29c9f5340441911e9efb49f6ba3 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VP2515 48a8c21d81cbc44bc2746a325e5250b6 176 PANTHER PTHR22573 1 170 3.5E-79 T 22-04-2016 VP2515 48a8c21d81cbc44bc2746a325e5250b6 176 PANTHER PTHR22573:SF56 1 170 3.5E-79 T 22-04-2016 VP2515 48a8c21d81cbc44bc2746a325e5250b6 176 Gene3D G3DSA:3.40.50.2020 2 175 3.7E-79 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2515 48a8c21d81cbc44bc2746a325e5250b6 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 2.6E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VP2515 48a8c21d81cbc44bc2746a325e5250b6 176 SUPERFAMILY SSF53271 3 175 6.39E-56 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2515 48a8c21d81cbc44bc2746a325e5250b6 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 5.1E-74 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 VP2445 443180c794f99eef1f92443b05a016a5 177 Pfam PF02036 SCP-2 sterol transfer family 44 136 4.9E-19 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VP2445 443180c794f99eef1f92443b05a016a5 177 PANTHER PTHR10094 3 147 1.9E-65 T 22-04-2016 VP2445 443180c794f99eef1f92443b05a016a5 177 PANTHER PTHR10094:SF16 3 147 1.9E-65 T 22-04-2016 VP2445 443180c794f99eef1f92443b05a016a5 177 SUPERFAMILY SSF55718 46 141 1.37E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VP2445 443180c794f99eef1f92443b05a016a5 177 PIRSF PIRSF025550 3 176 1.2E-87 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VP2445 443180c794f99eef1f92443b05a016a5 177 Gene3D G3DSA:3.30.1050.10 34 138 1.9E-11 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VP1178 c9e1a68d273d855b041db34d03049f33 1033 PANTHER PTHR32063:SF18 15 1033 0.0 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 Gene3D G3DSA:3.30.70.1430 54 153 2.9E-27 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 SUPERFAMILY SSF82693 54 149 5.93E-22 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 SUPERFAMILY SSF82866 306 505 1.31E-33 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 Pfam PF00873 AcrB/AcrD/AcrF family 18 1027 5.4E-173 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1178 c9e1a68d273d855b041db34d03049f33 1033 SUPERFAMILY SSF82714 198 281 7.06E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP1178 c9e1a68d273d855b041db34d03049f33 1033 Gene3D G3DSA:1.20.1640.10 304 513 1.3E-40 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 SUPERFAMILY SSF82714 728 802 2.09E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP1178 c9e1a68d273d855b041db34d03049f33 1033 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1178 c9e1a68d273d855b041db34d03049f33 1033 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1178 c9e1a68d273d855b041db34d03049f33 1033 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1178 c9e1a68d273d855b041db34d03049f33 1033 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1178 c9e1a68d273d855b041db34d03049f33 1033 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1178 c9e1a68d273d855b041db34d03049f33 1033 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP1178 c9e1a68d273d855b041db34d03049f33 1033 PANTHER PTHR32063 15 1033 0.0 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 Gene3D G3DSA:3.30.2090.10 728 803 4.8E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP1178 c9e1a68d273d855b041db34d03049f33 1033 Gene3D G3DSA:3.30.2090.10 198 281 1.0E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP1178 c9e1a68d273d855b041db34d03049f33 1033 SUPERFAMILY SSF82866 807 1029 4.05E-48 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 Gene3D G3DSA:1.10.3850.10 815 1028 1.3E-57 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 SUPERFAMILY SSF82693 150 196 3.14E-18 T 22-04-2016 VP1178 c9e1a68d273d855b041db34d03049f33 1033 SUPERFAMILY SSF82693 284 337 3.14E-18 T 22-04-2016 VP2673 9952813b74afba76923b03c70b084c52 287 SUPERFAMILY SSF52540 2 151 1.74E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2673 9952813b74afba76923b03c70b084c52 287 Gene3D G3DSA:3.40.50.300 1 155 2.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2673 9952813b74afba76923b03c70b084c52 287 Pfam PF03668 P-loop ATPase protein family 1 284 4.0E-110 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 VP2673 9952813b74afba76923b03c70b084c52 287 PIRSF PIRSF005052 1 286 3.0E-105 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 VP2673 9952813b74afba76923b03c70b084c52 287 PANTHER PTHR30448:SF0 1 284 3.8E-133 T 22-04-2016 VP2673 9952813b74afba76923b03c70b084c52 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.782 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 VP2673 9952813b74afba76923b03c70b084c52 287 PANTHER PTHR30448 1 284 3.8E-133 T 22-04-2016 VP2543 169eee68b07c242324396266b93cc3fb 376 PIRSF PIRSF015658 1 376 4.5E-178 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VP2543 169eee68b07c242324396266b93cc3fb 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.2E-168 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VP2543 169eee68b07c242324396266b93cc3fb 376 PANTHER PTHR35806 1 376 5.4E-193 T 22-04-2016 VP2543 169eee68b07c242324396266b93cc3fb 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.0E-157 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VP0064 a3971ec9afe39d993718ae91d229a6cd 458 PANTHER PTHR30354 9 458 5.2E-252 T 22-04-2016 VP0064 a3971ec9afe39d993718ae91d229a6cd 458 PANTHER PTHR30354:SF2 9 458 5.2E-252 T 22-04-2016 VP0064 a3971ec9afe39d993718ae91d229a6cd 458 Pfam PF02447 GntP family permease 14 456 1.8E-117 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VP0064 a3971ec9afe39d993718ae91d229a6cd 458 PIRSF PIRSF002746 9 458 8.0E-145 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VP0064 a3971ec9afe39d993718ae91d229a6cd 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 457 5.2E-107 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VP0156 5cdf5bd9f081ee75c8f5d966b05460fe 470 Pfam PF00860 Permease family 29 421 4.7E-99 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP0156 5cdf5bd9f081ee75c8f5d966b05460fe 470 PANTHER PTHR11119 12 467 3.1E-262 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP0156 5cdf5bd9f081ee75c8f5d966b05460fe 470 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 451 9.8E-128 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VP0156 5cdf5bd9f081ee75c8f5d966b05460fe 470 TIGRFAM TIGR03173 pbuX: xanthine permease 34 453 6.3E-132 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 VP0156 5cdf5bd9f081ee75c8f5d966b05460fe 470 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 369 389 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VP0156 5cdf5bd9f081ee75c8f5d966b05460fe 470 PANTHER PTHR11119:SF44 12 467 3.1E-262 T 22-04-2016 VP2314 07700cdd6c3bed3c9276e52ab982a001 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.576 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VP2314 07700cdd6c3bed3c9276e52ab982a001 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 1.2E-93 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VP2314 07700cdd6c3bed3c9276e52ab982a001 251 Gene3D G3DSA:3.40.1180.10 9 245 7.9E-98 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VP2314 07700cdd6c3bed3c9276e52ab982a001 251 SUPERFAMILY SSF64005 9 234 2.75E-87 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VP2314 07700cdd6c3bed3c9276e52ab982a001 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 2.6E-80 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VP2314 07700cdd6c3bed3c9276e52ab982a001 251 PANTHER PTHR10291 11 251 3.1E-122 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VP2314 07700cdd6c3bed3c9276e52ab982a001 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 VP2166 b131a4e79ad858a017a1c7a833ac7203 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 120 1.8E-17 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VP2166 b131a4e79ad858a017a1c7a833ac7203 128 SUPERFAMILY SSF54593 2 124 1.88E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP2166 b131a4e79ad858a017a1c7a833ac7203 128 Gene3D G3DSA:3.10.180.10 3 124 2.9E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP2166 b131a4e79ad858a017a1c7a833ac7203 128 PANTHER PTHR10374:SF8 1 126 2.3E-32 T 22-04-2016 VP2166 b131a4e79ad858a017a1c7a833ac7203 128 PANTHER PTHR10374 1 126 2.3E-32 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070 316 504 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070 822 1205 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070 532 802 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070 136 233 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070 22 107 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP2374 b40577cb871859c909e386a8bcb87811 1227 Pfam PF00580 UvrD/REP helicase N-terminal domain 27 452 4.3E-59 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070:SF23 316 504 0.0 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070:SF23 822 1205 0.0 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070:SF23 532 802 0.0 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070:SF23 136 233 0.0 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 PANTHER PTHR11070:SF23 22 107 0.0 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 Gene3D G3DSA:3.40.50.300 757 903 2.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 Gene3D G3DSA:3.40.50.300 466 599 2.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 22 1210 15.183 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VP2374 b40577cb871859c909e386a8bcb87811 1227 Gene3D G3DSA:3.40.50.300 138 167 6.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 Gene3D G3DSA:3.40.50.300 26 100 6.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 Gene3D G3DSA:3.40.50.300 366 465 6.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 Gene3D G3DSA:1.10.3170.10 173 365 1.2E-61 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 Gene3D G3DSA:3.90.320.10 919 1212 8.0E-101 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 VP2374 b40577cb871859c909e386a8bcb87811 1227 Pfam PF13361 UvrD-like helicase C-terminal domain 459 842 3.9E-17 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VP2374 b40577cb871859c909e386a8bcb87811 1227 Pfam PF12705 PD-(D/E)XK nuclease superfamily 986 1198 1.9E-6 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 SUPERFAMILY SSF52980 928 1211 1.98E-86 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VP2374 b40577cb871859c909e386a8bcb87811 1227 SUPERFAMILY SSF52540 341 793 2.33E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 SUPERFAMILY SSF52540 136 220 2.33E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 SUPERFAMILY SSF52540 823 870 2.33E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 SUPERFAMILY SSF52540 31 98 2.33E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2374 b40577cb871859c909e386a8bcb87811 1227 Gene3D G3DSA:1.10.486.10 602 756 1.0E-50 T 22-04-2016 VP2374 b40577cb871859c909e386a8bcb87811 1227 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 25 1209 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VP2337 b37485643e54aca09681593b38c57d67 454 SUPERFAMILY SSF161070 10 453 7.06E-119 T 22-04-2016 VP2337 b37485643e54aca09681593b38c57d67 454 PANTHER PTHR11616 10 453 1.1E-174 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2337 b37485643e54aca09681593b38c57d67 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 133 1.4E-21 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2337 b37485643e54aca09681593b38c57d67 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 2.4E-26 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2337 b37485643e54aca09681593b38c57d67 454 PANTHER PTHR11616:SF167 10 453 1.1E-174 T 22-04-2016 VP2337 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2337 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2337 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VP2611 8bf69fd505e568a595fb45e1a9819871 316 Gene3D G3DSA:3.40.50.20 2 129 4.5E-57 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP2611 8bf69fd505e568a595fb45e1a9819871 316 SUPERFAMILY SSF56059 123 313 5.82E-59 T 22-04-2016 VP2611 8bf69fd505e568a595fb45e1a9819871 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 5.7E-141 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VP2611 8bf69fd505e568a595fb45e1a9819871 316 Gene3D G3DSA:3.30.1490.20 137 191 3.0E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VP2611 8bf69fd505e568a595fb45e1a9819871 316 SUPERFAMILY SSF52440 2 122 8.63E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP2611 8bf69fd505e568a595fb45e1a9819871 316 Gene3D G3DSA:3.30.470.20 192 299 1.2E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VP2611 8bf69fd505e568a595fb45e1a9819871 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 8.6E-49 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VP2611 8bf69fd505e568a595fb45e1a9819871 316 PANTHER PTHR21621:SF4 1 314 7.0E-162 T 22-04-2016 VP2611 8bf69fd505e568a595fb45e1a9819871 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VP2611 8bf69fd505e568a595fb45e1a9819871 316 PANTHER PTHR21621 1 314 7.0E-162 T 22-04-2016 VP2611 8bf69fd505e568a595fb45e1a9819871 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 177.836 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VPA0797 8858f7bc0ee56d8becdec2dc31f40b57 86 PANTHER PTHR30244 1 81 5.6E-43 T 22-04-2016 VPA0797 8858f7bc0ee56d8becdec2dc31f40b57 86 Gene3D G3DSA:1.20.1330.10 1 83 9.5E-36 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPA0797 8858f7bc0ee56d8becdec2dc31f40b57 86 Pfam PF00669 Bacterial flagellin N-terminal helical region 1 81 9.5E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPA0797 8858f7bc0ee56d8becdec2dc31f40b57 86 PRINTS PR00207 Flagellin signature 16 35 1.0E-17 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPA0797 8858f7bc0ee56d8becdec2dc31f40b57 86 PRINTS PR00207 Flagellin signature 51 74 1.0E-17 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPA0797 8858f7bc0ee56d8becdec2dc31f40b57 86 PANTHER PTHR30244:SF1 1 81 5.6E-43 T 22-04-2016 VPA0797 8858f7bc0ee56d8becdec2dc31f40b57 86 SUPERFAMILY SSF64518 1 85 1.12E-32 T 22-04-2016 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 1.4E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Pfam PF14815 NUDIX domain 243 352 8.4E-21 T 22-04-2016 IPR029119 MutY, C-terminal VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 SMART SM00525 189 209 1.2E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 9.4E-22 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 SUPERFAMILY SSF55811 218 353 4.35E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Pfam PF00633 Helix-hairpin-helix motif 98 125 1.3E-5 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Gene3D G3DSA:3.90.79.10 228 353 1.5E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Gene3D G3DSA:1.10.340.30 19 119 1.2E-42 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 270 1.9E-125 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 SMART SM00478 37 188 2.0E-44 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 SUPERFAMILY SSF48150 3 223 2.67E-74 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 PANTHER PTHR10359 1 347 3.1E-103 T 22-04-2016 VP2626 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Gene3D G3DSA:1.10.1670.10 120 222 2.0E-39 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VP1914 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 Gene3D G3DSA:3.60.15.10 3 213 1.8E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP1914 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 PANTHER PTHR11935:SF115 1 215 6.4E-123 T 22-04-2016 VP1914 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 3.5E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP1914 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 SMART SM00849 14 195 2.3E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP1914 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 PANTHER PTHR11935 1 215 6.4E-123 T 22-04-2016 VP1914 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 SUPERFAMILY SSF56281 5 211 9.48E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP0980 f255dc4b9969074d7d1dc3d7b12d9517 169 PANTHER PTHR40547 1 166 2.9E-50 T 22-04-2016 VP0980 f255dc4b9969074d7d1dc3d7b12d9517 169 PANTHER PTHR40547:SF1 1 166 2.9E-50 T 22-04-2016 VP0980 f255dc4b9969074d7d1dc3d7b12d9517 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 5.7E-45 T 22-04-2016 IPR018639 Domain of unknown function DUF2062 VPA1391 6fc1049b75ecb4783ca65a1c7715ee1c 68 SUPERFAMILY SSF55785 8 60 3.72E-9 T 22-04-2016 IPR000014 PAS domain VPA1391 6fc1049b75ecb4783ca65a1c7715ee1c 68 SMART SM00086 15 55 4.9E-4 T 22-04-2016 IPR001610 PAC motif VPA1391 6fc1049b75ecb4783ca65a1c7715ee1c 68 Gene3D G3DSA:3.30.450.20 7 62 2.0E-9 T 22-04-2016 VP0203 c4a30dfdb1694c27dc2f1af4690f52bf 239 Pfam PF02348 Cytidylyltransferase 9 224 1.4E-29 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VP0203 c4a30dfdb1694c27dc2f1af4690f52bf 239 SUPERFAMILY SSF53448 6 233 3.15E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0203 c4a30dfdb1694c27dc2f1af4690f52bf 239 Gene3D G3DSA:3.90.550.10 5 233 1.2E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0203 c4a30dfdb1694c27dc2f1af4690f52bf 239 PANTHER PTHR21485 1 238 1.5E-45 T 22-04-2016 VP0203 c4a30dfdb1694c27dc2f1af4690f52bf 239 PANTHER PTHR21485:SF20 1 238 1.5E-45 T 22-04-2016 VP1864 8d97581fcf01d9b1e2c1979d2c37fdc5 137 SUPERFAMILY SSF54593 8 132 1.88E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP1864 8d97581fcf01d9b1e2c1979d2c37fdc5 137 PANTHER PTHR36437:SF2 2 134 1.9E-72 T 22-04-2016 VP1864 8d97581fcf01d9b1e2c1979d2c37fdc5 137 PANTHER PTHR36437 2 134 1.9E-72 T 22-04-2016 VP1864 8d97581fcf01d9b1e2c1979d2c37fdc5 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 2.8E-12 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VP1864 8d97581fcf01d9b1e2c1979d2c37fdc5 137 Gene3D G3DSA:3.10.180.10 12 131 1.9E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 41 130 2.79E-23 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.2090.10 181 264 2.2E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 136 181 7.72E-22 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 267 323 7.72E-22 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:1.20.1640.10 284 500 1.3E-55 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.8E-277 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 553 650 1.99E-21 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.2090.10 700 787 1.2E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PANTHER PTHR32063 1 1029 0.0 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82866 290 489 4.97E-47 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82714 182 263 1.31E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1430 555 650 3.3E-17 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82714 701 783 1.31E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:1.10.3850.10 792 1006 3.7E-58 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1430 41 141 4.3E-28 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82866 782 1008 7.85E-48 T 22-04-2016 VP0038 5fcb4c67bedb9561df3c72a334d352e1 1040 PANTHER PTHR32063:SF28 1 1029 0.0 T 22-04-2016 VP2585 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.7E-29 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VP2585 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Gene3D G3DSA:3.30.1910.10 1 65 6.4E-31 T 22-04-2016 VP2585 3b8ac1e2f2e6db60eb6026a3926eecb9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-30 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VP2020 003877ae2d365f906bcb4170c374b9e1 574 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 74 233 6.1E-12 T 22-04-2016 VP2020 003877ae2d365f906bcb4170c374b9e1 574 PANTHER PTHR33908:SF3 1 512 1.1E-91 T 22-04-2016 VP2020 003877ae2d365f906bcb4170c374b9e1 574 PANTHER PTHR33908 1 512 1.1E-91 T 22-04-2016 VP2122 523cc49164674873ea66a8ecce6df97a 212 Pfam PF01914 MarC family integral membrane protein 8 208 6.5E-64 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VP2122 523cc49164674873ea66a8ecce6df97a 212 PANTHER PTHR33508 2 211 1.1E-91 T 22-04-2016 VP2122 523cc49164674873ea66a8ecce6df97a 212 PANTHER PTHR33508:SF1 2 211 1.1E-91 T 22-04-2016 VP2122 523cc49164674873ea66a8ecce6df97a 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 204 4.4E-66 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VP2343 4854228e215e87fdb5f99aec8e2db030 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 3.0E-31 T 22-04-2016 IPR021250 Protein of unknown function DUF2789 VP0240 d1c2a30a447534088b21ff8b011a636b 115 PANTHER PTHR37950:SF1 2 115 1.6E-36 T 22-04-2016 VP0240 d1c2a30a447534088b21ff8b011a636b 115 PANTHER PTHR37950 2 115 1.6E-36 T 22-04-2016 VP0240 d1c2a30a447534088b21ff8b011a636b 115 SUPERFAMILY SSF55331 2 115 3.81E-33 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily VP0240 d1c2a30a447534088b21ff8b011a636b 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 4.4E-5 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 VP0240 d1c2a30a447534088b21ff8b011a636b 115 Gene3D G3DSA:3.30.429.10 1 115 4.5E-38 T 22-04-2016 VP2888 090217bd72dada7949601ca16a579a12 396 SMART SM00267 203 375 3.6E-52 T 22-04-2016 IPR000160 GGDEF domain VP2888 090217bd72dada7949601ca16a579a12 396 SUPERFAMILY SSF55785 71 201 1.12E-8 T 22-04-2016 IPR000014 PAS domain VP2888 090217bd72dada7949601ca16a579a12 396 PANTHER PTHR10799:SF750 129 372 4.5E-35 T 22-04-2016 VP2888 090217bd72dada7949601ca16a579a12 396 Gene3D G3DSA:3.30.450.20 71 201 7.6E-11 T 22-04-2016 VP2888 090217bd72dada7949601ca16a579a12 396 Gene3D G3DSA:3.30.70.270 216 377 3.4E-55 T 22-04-2016 VP2888 090217bd72dada7949601ca16a579a12 396 PANTHER PTHR10799 129 372 4.5E-35 T 22-04-2016 VP2888 090217bd72dada7949601ca16a579a12 396 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 211 374 6.4E-50 T 22-04-2016 IPR000160 GGDEF domain VP2888 090217bd72dada7949601ca16a579a12 396 SUPERFAMILY SSF55073 219 374 7.85E-49 T 22-04-2016 IPR029787 Nucleotide cyclase VP2888 090217bd72dada7949601ca16a579a12 396 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 371 3.3E-44 T 22-04-2016 IPR000160 GGDEF domain VP0081 65522f6aa56218b4b173c1b2bc26f2f8 183 Pfam PF04972 BON domain 33 99 9.0E-18 T 22-04-2016 IPR007055 BON domain VP0081 65522f6aa56218b4b173c1b2bc26f2f8 183 Pfam PF04972 BON domain 115 182 4.1E-16 T 22-04-2016 IPR007055 BON domain VP0081 65522f6aa56218b4b173c1b2bc26f2f8 183 SMART SM00749 37 100 42.0 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VP0081 65522f6aa56218b4b173c1b2bc26f2f8 183 SMART SM00749 120 183 0.0019 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VP0081 65522f6aa56218b4b173c1b2bc26f2f8 183 PANTHER PTHR34606 5 183 1.9E-18 T 22-04-2016 VP2006 d9628902389c53414cd175ad6c8cf028 703 SUPERFAMILY SSF52833 579 673 1.94E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2006 d9628902389c53414cd175ad6c8cf028 703 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 515 1.5E-14 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VP2006 d9628902389c53414cd175ad6c8cf028 703 PANTHER PTHR32234 1 702 8.9E-134 T 22-04-2016 VP2006 d9628902389c53414cd175ad6c8cf028 703 Gene3D G3DSA:3.40.30.10 582 674 4.9E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2006 d9628902389c53414cd175ad6c8cf028 703 Pfam PF13899 Thioredoxin-like 587 673 2.2E-11 T 22-04-2016 VP2006 d9628902389c53414cd175ad6c8cf028 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 164 3.4E-16 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VP2006 d9628902389c53414cd175ad6c8cf028 703 PANTHER PTHR32234:SF3 1 702 8.9E-134 T 22-04-2016 VP2006 d9628902389c53414cd175ad6c8cf028 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 Gene3D G3DSA:3.20.20.450 798 1044 5.4E-71 T 22-04-2016 IPR001633 EAL domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SMART SM00091 371 438 210.0 T 22-04-2016 IPR000014 PAS domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SMART SM00091 496 563 5.5E-4 T 22-04-2016 IPR000014 PAS domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 PANTHER PTHR33121:SF10 738 1046 4.5E-37 T 22-04-2016 VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 PANTHER PTHR33121 738 1046 4.5E-37 T 22-04-2016 VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SUPERFAMILY SSF141868 797 1044 2.35E-71 T 22-04-2016 IPR001633 EAL domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 614 778 7.8E-33 T 22-04-2016 IPR000160 GGDEF domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 Pfam PF04392 ABC transporter substrate binding protein 42 282 1.4E-6 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 Pfam PF00563 EAL domain 799 1033 2.3E-59 T 22-04-2016 IPR001633 EAL domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SUPERFAMILY SSF55785 481 604 1.93E-19 T 22-04-2016 IPR000014 PAS domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 Gene3D G3DSA:3.30.450.20 482 604 1.4E-20 T 22-04-2016 VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 Gene3D G3DSA:3.30.450.20 360 481 1.2E-6 T 22-04-2016 VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SUPERFAMILY SSF55073 623 779 3.37E-40 T 22-04-2016 IPR029787 Nucleotide cyclase VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SMART SM00052 791 1038 2.1E-60 T 22-04-2016 IPR001633 EAL domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 Gene3D G3DSA:3.30.70.270 620 781 7.3E-43 T 22-04-2016 VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 Pfam PF13426 PAS domain 507 606 5.1E-10 T 22-04-2016 IPR000014 PAS domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 Pfam PF00990 Diguanylate cyclase, GGDEF domain 618 775 7.3E-35 T 22-04-2016 IPR000160 GGDEF domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 367 491 1.4E-6 T 22-04-2016 IPR000014 PAS domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 493 614 1.4E-15 T 22-04-2016 IPR000014 PAS domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SMART SM00086 569 607 0.32 T 22-04-2016 IPR001610 PAC motif VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SMART SM00086 442 484 14.0 T 22-04-2016 IPR001610 PAC motif VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SMART SM00267 607 779 8.0E-43 T 22-04-2016 IPR000160 GGDEF domain VP0071 ff7469e98b52b4ab1b3c72007755b627 1046 SUPERFAMILY SSF55785 359 482 3.66E-7 T 22-04-2016 IPR000014 PAS domain VP2676 84fecc3c7ae72b61f3f895be9a1abee1 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 7.7E-55 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VP2676 84fecc3c7ae72b61f3f895be9a1abee1 447 PANTHER PTHR30624:SF1 2 447 3.3E-184 T 22-04-2016 VP2676 84fecc3c7ae72b61f3f895be9a1abee1 447 PANTHER PTHR30624 2 447 3.3E-184 T 22-04-2016 VP2676 84fecc3c7ae72b61f3f895be9a1abee1 447 SUPERFAMILY SSF111283 12 447 1.44E-128 T 22-04-2016 VP2013 6d30367c3e9f413b532d64872156780c 376 Pfam PF03916 Polysulphide reductase, NrfD 9 318 2.6E-19 T 22-04-2016 IPR005614 NrfD family VP0945 53d20c585cc59278858286bc3a648e30 119 SUPERFAMILY SSF158757 22 99 1.02E-35 T 22-04-2016 IPR023163 SMc04008-like domain VP0945 53d20c585cc59278858286bc3a648e30 119 Gene3D G3DSA:1.10.3340.10 21 106 8.8E-43 T 22-04-2016 IPR023163 SMc04008-like domain VP0945 53d20c585cc59278858286bc3a648e30 119 Pfam PF06844 Protein of unknown function (DUF1244) 49 115 1.4E-34 T 22-04-2016 IPR023163 SMc04008-like domain VP2694 af89a236a0ae23ed04579ffa3fd3b4b1 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP0723 29f9ffc63867a72288d109d8c45c7a17 156 PANTHER PTHR33603:SF1 1 155 6.4E-73 T 22-04-2016 VP0723 29f9ffc63867a72288d109d8c45c7a17 156 Gene3D G3DSA:3.40.1280.10 2 155 2.2E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VP0723 29f9ffc63867a72288d109d8c45c7a17 156 PANTHER PTHR33603 1 155 6.4E-73 T 22-04-2016 VP0723 29f9ffc63867a72288d109d8c45c7a17 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 5.4E-78 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP0723 29f9ffc63867a72288d109d8c45c7a17 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 6.3E-49 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP0723 29f9ffc63867a72288d109d8c45c7a17 156 SUPERFAMILY SSF75217 1 154 2.04E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VP0723 29f9ffc63867a72288d109d8c45c7a17 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.687 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP0723 29f9ffc63867a72288d109d8c45c7a17 156 PIRSF PIRSF004505 1 155 6.9E-44 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP1001 5d18c6c9e64c30fbb1210662b439e1a6 225 PANTHER PTHR30450 1 225 3.9E-147 T 22-04-2016 VP1001 5d18c6c9e64c30fbb1210662b439e1a6 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 2.8E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VP1001 5d18c6c9e64c30fbb1210662b439e1a6 225 Gene3D G3DSA:1.10.3720.10 9 217 3.1E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1001 5d18c6c9e64c30fbb1210662b439e1a6 225 PANTHER PTHR30450:SF4 1 225 3.9E-147 T 22-04-2016 VP1001 5d18c6c9e64c30fbb1210662b439e1a6 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 217 1.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1001 5d18c6c9e64c30fbb1210662b439e1a6 225 SUPERFAMILY SSF161098 11 206 1.96E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1645 ba78828209478d563b376b61eb090e2a 398 SUPERFAMILY SSF54506 8 187 1.02E-70 T 22-04-2016 VP1645 ba78828209478d563b376b61eb090e2a 398 Gene3D G3DSA:3.10.310.10 199 376 6.6E-80 T 22-04-2016 VP1645 ba78828209478d563b376b61eb090e2a 398 PANTHER PTHR30349 1 255 1.8E-123 T 22-04-2016 VP1645 ba78828209478d563b376b61eb090e2a 398 Pfam PF04303 PrpF protein 11 393 3.5E-174 T 22-04-2016 IPR007400 PrpF protein VP1645 ba78828209478d563b376b61eb090e2a 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 9 397 2.2E-236 T 22-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 VP1645 ba78828209478d563b376b61eb090e2a 398 SUPERFAMILY SSF54506 191 396 4.63E-76 T 22-04-2016 VP1645 ba78828209478d563b376b61eb090e2a 398 PANTHER PTHR30349:SF21 1 255 1.8E-123 T 22-04-2016 VP1645 ba78828209478d563b376b61eb090e2a 398 Gene3D G3DSA:3.10.310.10 8 198 5.0E-90 T 22-04-2016 VP0680 7d12f137d212f43f2113c963264973f1 217 SUPERFAMILY SSF63380 1 89 1.79E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP0680 7d12f137d212f43f2113c963264973f1 217 SUPERFAMILY SSF63380 93 198 6.12E-33 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VP0680 7d12f137d212f43f2113c963264973f1 217 Pfam PF00677 Lumazine binding domain 100 184 1.3E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0680 7d12f137d212f43f2113c963264973f1 217 Pfam PF00677 Lumazine binding domain 3 87 5.3E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0680 7d12f137d212f43f2113c963264973f1 217 PANTHER PTHR21098 1 217 1.9E-103 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0680 7d12f137d212f43f2113c963264973f1 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 3.4E-67 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0680 7d12f137d212f43f2113c963264973f1 217 PIRSF PIRSF000498 1 211 1.5E-80 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VP0680 7d12f137d212f43f2113c963264973f1 217 Gene3D G3DSA:2.40.30.20 105 195 8.7E-33 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP0680 7d12f137d212f43f2113c963264973f1 217 Gene3D G3DSA:2.40.30.20 5 104 1.0E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP0883 b77da2e27189b3d9026e9835648af305 154 Pfam PF07977 FabA-like domain 11 132 2.4E-5 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VP0883 b77da2e27189b3d9026e9835648af305 154 Gene3D G3DSA:3.10.129.10 5 139 1.3E-22 T 22-04-2016 IPR029069 HotDog domain VP0883 b77da2e27189b3d9026e9835648af305 154 PIRSF PIRSF020565 1 154 6.8E-67 T 22-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VP0883 b77da2e27189b3d9026e9835648af305 154 SUPERFAMILY SSF54637 4 143 5.07E-29 T 22-04-2016 IPR029069 HotDog domain VP2484 49b96d01130839b9ad5584cab2d342d3 579 Gene3D G3DSA:1.50.10.10 98 562 5.5E-69 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VP2484 49b96d01130839b9ad5584cab2d342d3 579 SUPERFAMILY SSF81296 2 90 1.96E-14 T 22-04-2016 IPR014756 Immunoglobulin E-set VP2484 49b96d01130839b9ad5584cab2d342d3 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 7.7E-10 T 22-04-2016 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VP2484 49b96d01130839b9ad5584cab2d342d3 579 SUPERFAMILY SSF48208 84 565 8.08E-93 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VP2484 49b96d01130839b9ad5584cab2d342d3 579 Gene3D G3DSA:2.60.40.10 5 91 1.4E-14 T 22-04-2016 IPR013783 Immunoglobulin-like fold VP2484 49b96d01130839b9ad5584cab2d342d3 579 Pfam PF00759 Glycosyl hydrolase family 9 98 500 4.9E-23 T 22-04-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VP2003 9033c32e2a0bb5d3edc81c4c770c511c 224 Pfam PF08242 Methyltransferase domain 58 151 6.4E-14 T 22-04-2016 IPR013217 Methyltransferase type 12 VP2003 9033c32e2a0bb5d3edc81c4c770c511c 224 SUPERFAMILY SSF53335 19 216 8.29E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2003 9033c32e2a0bb5d3edc81c4c770c511c 224 PANTHER PTHR10108 16 202 9.0E-22 T 22-04-2016 VP2003 9033c32e2a0bb5d3edc81c4c770c511c 224 Gene3D G3DSA:3.40.50.150 13 200 8.0E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1207 ad1c698351c8c6b8797ca5541246092e 564 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 514 6.5E-35 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 SUPERFAMILY SSF55816 366 542 7.06E-46 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 Gene3D G3DSA:3.60.21.10 34 363 1.2E-85 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1207 ad1c698351c8c6b8797ca5541246092e 564 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VP1207 ad1c698351c8c6b8797ca5541246092e 564 PRINTS PR01607 Apyrase family signature 420 443 4.1E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 PRINTS PR01607 Apyrase family signature 489 508 4.1E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 PRINTS PR01607 Apyrase family signature 37 55 4.1E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 PRINTS PR01607 Apyrase family signature 290 310 4.1E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 PRINTS PR01607 Apyrase family signature 214 231 4.1E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 PRINTS PR01607 Apyrase family signature 245 268 4.1E-42 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 Gene3D G3DSA:3.90.780.10 366 540 1.1E-46 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 PANTHER PTHR11575:SF27 36 552 3.5E-193 T 22-04-2016 VP1207 ad1c698351c8c6b8797ca5541246092e 564 Pfam PF00149 Calcineurin-like phosphoesterase 39 262 2.4E-18 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 PANTHER PTHR11575 36 552 3.5E-193 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VP1207 ad1c698351c8c6b8797ca5541246092e 564 SUPERFAMILY SSF56300 34 364 4.24E-85 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP1641 20d918dc32d47cb1c78e1553f58f89d7 474 SUPERFAMILY SSF48317 200 346 1.13E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VP1641 20d918dc32d47cb1c78e1553f58f89d7 474 Gene3D G3DSA:3.90.79.10 24 84 1.6E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP1641 20d918dc32d47cb1c78e1553f58f89d7 474 Gene3D G3DSA:1.20.144.10 192 346 6.0E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VP1641 20d918dc32d47cb1c78e1553f58f89d7 474 SUPERFAMILY SSF55811 23 161 1.62E-18 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP1641 20d918dc32d47cb1c78e1553f58f89d7 474 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VP1641 20d918dc32d47cb1c78e1553f58f89d7 474 Pfam PF01569 PAP2 superfamily 233 345 3.4E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VP1641 20d918dc32d47cb1c78e1553f58f89d7 474 Pfam PF00293 NUDIX domain 24 94 3.3E-10 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VP2079 a66078d176b6ded2eac4777844d6523e 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 1.2E-25 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VP2079 a66078d176b6ded2eac4777844d6523e 311 PANTHER PTHR32196 1 304 9.2E-140 T 22-04-2016 VP2079 a66078d176b6ded2eac4777844d6523e 311 PANTHER PTHR32196:SF27 1 304 9.2E-140 T 22-04-2016 VP2092 8506ae11ae46e29423d25d998020f60e 151 SUPERFAMILY SSF54690 4 149 2.75E-55 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VP2092 8506ae11ae46e29423d25d998020f60e 151 PANTHER PTHR23404 4 151 6.3E-44 T 22-04-2016 VP2092 8506ae11ae46e29423d25d998020f60e 151 PANTHER PTHR23404:SF2 4 151 6.3E-44 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VP2092 8506ae11ae46e29423d25d998020f60e 151 Pfam PF02391 MoaE protein 8 120 6.8E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VP2092 8506ae11ae46e29423d25d998020f60e 151 Gene3D G3DSA:3.90.1170.40 3 149 1.8E-57 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VP1056 bd8fedddb1f5b9b93a25268b4776dc63 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 7.0E-50 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- VP1056 bd8fedddb1f5b9b93a25268b4776dc63 139 Pfam PF03061 Thioesterase superfamily 22 106 1.6E-17 T 22-04-2016 IPR006683 Thioesterase domain VP1056 bd8fedddb1f5b9b93a25268b4776dc63 139 Gene3D G3DSA:3.10.129.10 6 131 9.9E-49 T 22-04-2016 IPR029069 HotDog domain VP1056 bd8fedddb1f5b9b93a25268b4776dc63 139 PANTHER PTHR31793 2 134 1.7E-48 T 22-04-2016 VP1056 bd8fedddb1f5b9b93a25268b4776dc63 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 1.3E-37 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VP1056 bd8fedddb1f5b9b93a25268b4776dc63 139 SUPERFAMILY SSF54637 5 132 5.32E-42 T 22-04-2016 IPR029069 HotDog domain VP1056 bd8fedddb1f5b9b93a25268b4776dc63 139 PIRSF PIRSF003230 2 138 3.5E-47 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VP1056 bd8fedddb1f5b9b93a25268b4776dc63 139 PANTHER PTHR31793:SF9 2 134 1.7E-48 T 22-04-2016 VP0311 e13b15fe7f24eef660c6a0f3bf18ab62 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VP0311 e13b15fe7f24eef660c6a0f3bf18ab62 176 PANTHER PTHR10286 6 172 6.0E-75 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VP0311 e13b15fe7f24eef660c6a0f3bf18ab62 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.251 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VP0311 e13b15fe7f24eef660c6a0f3bf18ab62 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.4E-51 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VP0311 e13b15fe7f24eef660c6a0f3bf18ab62 176 SUPERFAMILY SSF50324 3 174 2.09E-65 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VP0311 e13b15fe7f24eef660c6a0f3bf18ab62 176 Gene3D G3DSA:3.90.80.10 4 175 1.1E-58 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VP0176 955c1deaca781da2d5127df5ed21b611 288 PANTHER PTHR30636 1 288 1.4E-111 T 22-04-2016 VP0176 955c1deaca781da2d5127df5ed21b611 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.4E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 VP0176 955c1deaca781da2d5127df5ed21b611 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.5E-117 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 VP0176 955c1deaca781da2d5127df5ed21b611 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 5.8E-44 T 22-04-2016 IPR013527 YicC-like, N-terminal VP1775 e63d4552656bab46d7af3ca2e328547e 425 PANTHER PTHR13847 1 425 2.2E-208 T 22-04-2016 VP1775 e63d4552656bab46d7af3ca2e328547e 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 4.6E-54 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VP1775 e63d4552656bab46d7af3ca2e328547e 425 Gene3D G3DSA:3.50.50.60 15 118 1.3E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1775 e63d4552656bab46d7af3ca2e328547e 425 Gene3D G3DSA:3.50.50.60 171 251 1.3E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1775 e63d4552656bab46d7af3ca2e328547e 425 Gene3D G3DSA:3.50.50.60 343 400 1.3E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1775 e63d4552656bab46d7af3ca2e328547e 425 PANTHER PTHR13847:SF210 1 425 2.2E-208 T 22-04-2016 VP1775 e63d4552656bab46d7af3ca2e328547e 425 SUPERFAMILY SSF51905 28 251 1.55E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1775 e63d4552656bab46d7af3ca2e328547e 425 SUPERFAMILY SSF51905 353 409 1.55E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP1646 dd03df87a451c4d26069614009cc508e 863 Gene3D G3DSA:3.40.1060.10 231 364 3.5E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 Gene3D G3DSA:3.30.499.10 365 550 4.9E-56 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 Gene3D G3DSA:3.20.19.10 609 860 1.4E-63 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VP1646 dd03df87a451c4d26069614009cc508e 863 SUPERFAMILY SSF52016 602 860 1.33E-67 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VP1646 dd03df87a451c4d26069614009cc508e 863 Gene3D G3DSA:3.30.499.10 27 230 2.2E-60 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 862 0.0 T 22-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 468 481 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 209 224 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 142 155 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 364 378 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 166 174 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 406 417 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 285 298 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 271 284 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PRINTS PR00415 Aconitase family signature 195 208 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PANTHER PTHR11670 13 680 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 PANTHER PTHR11670 723 863 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 2.0E-148 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 Pfam PF00694 Aconitase C-terminal domain 660 790 3.4E-30 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 SUPERFAMILY SSF53732 16 595 7.06E-189 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VP1646 dd03df87a451c4d26069614009cc508e 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 859 4.8E-292 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VP1646 dd03df87a451c4d26069614009cc508e 863 PANTHER PTHR11670:SF43 13 680 0.0 T 22-04-2016 VP1646 dd03df87a451c4d26069614009cc508e 863 PANTHER PTHR11670:SF43 723 863 0.0 T 22-04-2016 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 PANTHER PTHR24220 5 293 4.1E-204 T 22-04-2016 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 PANTHER PTHR24220 329 438 4.1E-204 T 22-04-2016 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 PANTHER PTHR24220:SF336 5 293 4.1E-204 T 22-04-2016 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 PANTHER PTHR24220:SF336 329 438 4.1E-204 T 22-04-2016 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 SUPERFAMILY SSF52540 304 553 9.8E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 Pfam PF00005 ABC transporter 330 483 5.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 Pfam PF00005 ABC transporter 24 181 6.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 SUPERFAMILY SSF52540 3 253 5.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 8.1E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.1E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 SMART SM00382 338 534 1.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 SMART SM00382 32 231 2.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 Gene3D G3DSA:3.40.50.300 2 255 1.2E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0047 ac41bb2f0d623e2e2a575418bd57d4d7 571 Gene3D G3DSA:3.40.50.300 301 555 6.6E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2489 be76183be99c594b108eb896a5d0a474 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2489 be76183be99c594b108eb896a5d0a474 343 Gene3D G3DSA:3.40.50.300 4 236 5.6E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2489 be76183be99c594b108eb896a5d0a474 343 Pfam PF00005 ABC transporter 20 164 8.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2489 be76183be99c594b108eb896a5d0a474 343 PANTHER PTHR24220:SF282 6 335 5.5E-130 T 22-04-2016 VP2489 be76183be99c594b108eb896a5d0a474 343 SMART SM00382 29 214 3.8E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2489 be76183be99c594b108eb896a5d0a474 343 PANTHER PTHR24220 6 335 5.5E-130 T 22-04-2016 VP2489 be76183be99c594b108eb896a5d0a474 343 SUPERFAMILY SSF50331 265 342 2.1E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VP2489 be76183be99c594b108eb896a5d0a474 343 Pfam PF08402 TOBE domain 276 341 3.2E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VP2489 be76183be99c594b108eb896a5d0a474 343 SUPERFAMILY SSF52540 5 243 2.08E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0416 7967d1ac3d300cbe10c7a911ba2027e3 227 Pfam PF16537 Type II secretion system protein B 162 221 5.8E-25 T 22-04-2016 IPR032389 Type II secretion system protein B VP0756 6030b0a927fd6f520259a189e5324951 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 83 204 2.9E-6 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin VP0756 6030b0a927fd6f520259a189e5324951 230 Gene3D G3DSA:2.40.230.30 43 230 2.8E-32 T 22-04-2016 VP2114 88bf318f339605b39aeb6e4638df9306 214 PANTHER PTHR30231:SF2 8 214 9.1E-115 T 22-04-2016 VP2114 88bf318f339605b39aeb6e4638df9306 214 SMART SM00479 18 204 3.2E-30 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP2114 88bf318f339605b39aeb6e4638df9306 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.573 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VP2114 88bf318f339605b39aeb6e4638df9306 214 PANTHER PTHR30231 8 214 9.1E-115 T 22-04-2016 VP2114 88bf318f339605b39aeb6e4638df9306 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.8E-100 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VP2114 88bf318f339605b39aeb6e4638df9306 214 Pfam PF00929 Exonuclease 20 195 7.9E-46 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP2114 88bf318f339605b39aeb6e4638df9306 214 SUPERFAMILY SSF53098 10 208 4.96E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2114 88bf318f339605b39aeb6e4638df9306 214 Gene3D G3DSA:3.30.420.10 10 210 5.1E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP0220 626cf1a178c370d2a5a29896170a675f 889 Pfam PF02563 Polysaccharide biosynthesis/export protein 116 178 2.8E-13 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VP0220 626cf1a178c370d2a5a29896170a675f 889 PANTHER PTHR33619 89 441 1.8E-126 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 PANTHER PTHR33619 553 587 1.8E-126 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 PANTHER PTHR33619 608 885 1.8E-126 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Gene3D G3DSA:3.10.560.10 649 695 1.2E-15 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Gene3D G3DSA:3.10.560.10 552 637 6.3E-13 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Gene3D G3DSA:3.10.560.10 364 449 4.3E-11 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Gene3D G3DSA:3.10.560.10 190 273 2.8E-21 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Gene3D G3DSA:3.10.560.10 750 776 1.2E-15 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Gene3D G3DSA:3.10.560.10 278 355 3.4E-18 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Gene3D G3DSA:3.10.560.10 777 859 2.9E-14 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Pfam PF10531 SLBB domain 280 323 1.1E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain VP0220 626cf1a178c370d2a5a29896170a675f 889 Pfam PF10531 SLBB domain 557 601 7.9E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain VP0220 626cf1a178c370d2a5a29896170a675f 889 Pfam PF10531 SLBB domain 197 245 4.0E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain VP0220 626cf1a178c370d2a5a29896170a675f 889 Gene3D G3DSA:3.30.1950.10 124 189 1.6E-11 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 PANTHER PTHR33619:SF1 89 441 1.8E-126 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 PANTHER PTHR33619:SF1 553 587 1.8E-126 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 PANTHER PTHR33619:SF1 608 885 1.8E-126 T 22-04-2016 VP0220 626cf1a178c370d2a5a29896170a675f 889 Pfam PF06251 Capsule biosynthesis GfcC 661 862 1.5E-11 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 VP0220 626cf1a178c370d2a5a29896170a675f 889 SUPERFAMILY SSF142984 651 687 9.42E-5 T 22-04-2016 VP1303 a3aeb9887543db4121c4d4454bc54e23 231 PANTHER PTHR14097 1 226 1.0E-54 T 22-04-2016 VP1303 a3aeb9887543db4121c4d4454bc54e23 231 Gene3D G3DSA:3.40.50.720 7 210 1.0E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1303 a3aeb9887543db4121c4d4454bc54e23 231 Pfam PF13460 NAD(P)H-binding 13 162 4.8E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1303 a3aeb9887543db4121c4d4454bc54e23 231 PANTHER PTHR14097:SF7 1 226 1.0E-54 T 22-04-2016 VP1303 a3aeb9887543db4121c4d4454bc54e23 231 SUPERFAMILY SSF51735 7 220 9.15E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2899 7d0eef3d3e5562d5f437b42f8c2483fd 243 Pfam PF07356 Protein of unknown function (DUF1481) 45 239 7.1E-57 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 VP2899 7d0eef3d3e5562d5f437b42f8c2483fd 243 PIRSF PIRSF028160 6 243 4.4E-128 T 22-04-2016 IPR016872 Uncharacterised conserved protein UCP028160 VP1393 b856d9591d0c6ee8823a16365a325126 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 6.6E-29 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp VP1393 b856d9591d0c6ee8823a16365a325126 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.9E-64 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp VP1393 b856d9591d0c6ee8823a16365a325126 172 Gene3D G3DSA:2.30.110.20 1 166 2.1E-28 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp VP1393 b856d9591d0c6ee8823a16365a325126 172 SUPERFAMILY SSF141452 3 168 2.22E-38 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp VP1393 b856d9591d0c6ee8823a16365a325126 172 PANTHER PTHR34319 1 169 2.6E-49 T 22-04-2016 VP1253 7fb7218892452878dc9b435d261379c0 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 2.4E-165 T 22-04-2016 IPR011340 Cysteine desulfurase-related VP1253 7fb7218892452878dc9b435d261379c0 411 Pfam PF00266 Aminotransferase class-V 26 401 1.9E-68 T 22-04-2016 IPR000192 Aminotransferase class V domain VP1253 7fb7218892452878dc9b435d261379c0 411 PANTHER PTHR11601:SF22 1 410 1.5E-146 T 22-04-2016 VP1253 7fb7218892452878dc9b435d261379c0 411 Gene3D G3DSA:3.90.1150.10 269 410 3.7E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1253 7fb7218892452878dc9b435d261379c0 411 SUPERFAMILY SSF53383 3 410 5.3E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1253 7fb7218892452878dc9b435d261379c0 411 PANTHER PTHR11601 1 410 1.5E-146 T 22-04-2016 VP1253 7fb7218892452878dc9b435d261379c0 411 Gene3D G3DSA:3.40.640.10 36 268 3.5E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1934 a03e55a87b54f44df3e175b80440f467 760 Gene3D G3DSA:3.20.70.20 398 559 1.2E-42 T 22-04-2016 VP1934 a03e55a87b54f44df3e175b80440f467 760 Gene3D G3DSA:3.20.70.20 610 702 1.2E-42 T 22-04-2016 VP1934 a03e55a87b54f44df3e175b80440f467 760 Gene3D G3DSA:3.20.70.20 130 344 1.2E-42 T 22-04-2016 VP1934 a03e55a87b54f44df3e175b80440f467 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1934 a03e55a87b54f44df3e175b80440f467 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 665 1.3E-113 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1934 a03e55a87b54f44df3e175b80440f467 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 4.9E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VP1934 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1934 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1934 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1934 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1934 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1934 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VP1934 a03e55a87b54f44df3e175b80440f467 760 Pfam PF03477 ATP cone domain 6 92 2.1E-18 T 22-04-2016 IPR005144 ATP-cone domain VP1934 a03e55a87b54f44df3e175b80440f467 760 PANTHER PTHR11573 6 752 0.0 T 22-04-2016 VP1934 a03e55a87b54f44df3e175b80440f467 760 PANTHER PTHR11573:SF17 6 752 0.0 T 22-04-2016 VP1934 a03e55a87b54f44df3e175b80440f467 760 SUPERFAMILY SSF51998 222 738 5.8E-164 T 22-04-2016 VP1934 a03e55a87b54f44df3e175b80440f467 760 SUPERFAMILY SSF48168 10 221 2.49E-74 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VP1934 a03e55a87b54f44df3e175b80440f467 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.4E-175 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VP2555 22f4392f9bd06bfc2b0e3d6783c2d116 208 PANTHER PTHR11579 7 203 1.5E-82 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VP2555 22f4392f9bd06bfc2b0e3d6783c2d116 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 2.2E-82 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VP2555 22f4392f9bd06bfc2b0e3d6783c2d116 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VP2555 22f4392f9bd06bfc2b0e3d6783c2d116 208 SUPERFAMILY SSF53335 14 204 3.53E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2555 22f4392f9bd06bfc2b0e3d6783c2d116 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 3.7E-71 T 22-04-2016 VP2555 22f4392f9bd06bfc2b0e3d6783c2d116 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.618 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VP2555 22f4392f9bd06bfc2b0e3d6783c2d116 208 Gene3D G3DSA:3.40.50.150 16 204 1.2E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 1.5E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 SMART SM00448 456 569 6.2E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 6.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 6.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 6.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 6.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 2.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 SUPERFAMILY SSF55874 268 436 5.11E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 SUPERFAMILY SSF47384 199 280 1.84E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 Gene3D G3DSA:3.30.565.10 265 437 7.5E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 Pfam PF00072 Response regulator receiver domain 459 570 5.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 PANTHER PTHR24423 212 574 2.9E-140 T 22-04-2016 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 PANTHER PTHR24423 10 24 2.9E-140 T 22-04-2016 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 SMART SM00387 326 437 2.4E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 SUPERFAMILY SSF52172 456 574 1.05E-35 T 22-04-2016 IPR011006 CheY-like superfamily VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 SMART SM00388 214 279 1.3E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 Gene3D G3DSA:3.40.50.2300 449 575 5.7E-40 T 22-04-2016 VP1547 5a60ef670b298e935ec99dfc93b3cd49 576 Gene3D G3DSA:1.10.287.130 206 264 5.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP1287 1e34dc86d030f1c9a1355e1938c3bb35 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 9.9E-67 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein VP1287 1e34dc86d030f1c9a1355e1938c3bb35 263 SUPERFAMILY SSF89392 106 212 2.79E-5 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VP1287 1e34dc86d030f1c9a1355e1938c3bb35 263 Gene3D G3DSA:2.50.20.10 26 261 5.6E-85 T 22-04-2016 VP1076 74c103b21aa69d096ac2c767ed29156f 194 Pfam PF13730 Helix-turn-helix domain 44 101 2.9E-10 T 22-04-2016 VP1076 74c103b21aa69d096ac2c767ed29156f 194 Gene3D G3DSA:1.10.10.10 50 106 4.8E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1076 74c103b21aa69d096ac2c767ed29156f 194 SUPERFAMILY SSF46785 51 106 9.97E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPA0858 da6fcce31d1d7f7efb7c87e4111818ae 185 PANTHER PTHR11956 1 185 5.5E-85 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPA0858 da6fcce31d1d7f7efb7c87e4111818ae 185 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 3 14 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPA0858 da6fcce31d1d7f7efb7c87e4111818ae 185 Pfam PF00750 tRNA synthetases class I (R) 1 185 7.3E-85 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPA0858 da6fcce31d1d7f7efb7c87e4111818ae 185 PRINTS PR01038 Arginyl-tRNA synthetase signature 10 26 2.6E-11 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPA0858 da6fcce31d1d7f7efb7c87e4111818ae 185 PRINTS PR01038 Arginyl-tRNA synthetase signature 34 47 2.6E-11 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPA0858 da6fcce31d1d7f7efb7c87e4111818ae 185 Gene3D G3DSA:3.40.50.620 1 177 1.6E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPA0858 da6fcce31d1d7f7efb7c87e4111818ae 185 PANTHER PTHR11956:SF1 1 185 5.5E-85 T 22-04-2016 VPA0858 da6fcce31d1d7f7efb7c87e4111818ae 185 SUPERFAMILY SSF52374 1 176 1.16E-48 T 22-04-2016 VP2614 53e00e768533ae46a41ef4a50d4a758e 368 Gene3D G3DSA:3.40.50.300 102 342 2.9E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2614 53e00e768533ae46a41ef4a50d4a758e 368 Pfam PF00437 Type II/IV secretion system protein 116 267 3.1E-36 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VP2614 53e00e768533ae46a41ef4a50d4a758e 368 SUPERFAMILY SSF52540 4 334 6.34E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2614 53e00e768533ae46a41ef4a50d4a758e 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.4E-126 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VP2614 53e00e768533ae46a41ef4a50d4a758e 368 PANTHER PTHR30486:SF3 1 368 4.1E-160 T 22-04-2016 VP2614 53e00e768533ae46a41ef4a50d4a758e 368 PANTHER PTHR30486 1 368 4.1E-160 T 22-04-2016 VP3064 05ef8bfc9d1d1e4b0bdd332cc53bea28 401 Gene3D G3DSA:1.20.1250.20 201 374 1.3E-10 T 22-04-2016 VP3064 05ef8bfc9d1d1e4b0bdd332cc53bea28 401 SUPERFAMILY SSF103473 5 378 1.12E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP3064 05ef8bfc9d1d1e4b0bdd332cc53bea28 401 Pfam PF07690 Major Facilitator Superfamily 13 349 3.9E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP3064 05ef8bfc9d1d1e4b0bdd332cc53bea28 401 Gene3D G3DSA:1.20.1250.20 9 182 7.1E-22 T 22-04-2016 VP3064 05ef8bfc9d1d1e4b0bdd332cc53bea28 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 7.4E-82 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VP3064 05ef8bfc9d1d1e4b0bdd332cc53bea28 401 PANTHER PTHR23502:SF28 1 368 3.9E-182 T 22-04-2016 VP3064 05ef8bfc9d1d1e4b0bdd332cc53bea28 401 PANTHER PTHR23502 1 368 3.9E-182 T 22-04-2016 VP3031 7a8ca28b393aadcc30abc0e0c85ec44e 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 9.5E-4 T 22-04-2016 IPR001451 Hexapeptide repeat VP3031 7a8ca28b393aadcc30abc0e0c85ec44e 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.6E-5 T 22-04-2016 IPR001451 Hexapeptide repeat VP3031 7a8ca28b393aadcc30abc0e0c85ec44e 182 SUPERFAMILY SSF51161 4 174 1.05E-43 T 22-04-2016 IPR011004 Trimeric LpxA-like VP3031 7a8ca28b393aadcc30abc0e0c85ec44e 182 Gene3D G3DSA:2.160.10.10 4 175 1.5E-44 T 22-04-2016 VP3031 7a8ca28b393aadcc30abc0e0c85ec44e 182 PANTHER PTHR13061 1 177 4.7E-72 T 22-04-2016 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PANTHER PTHR19271:SF9 247 418 1.0E-268 T 22-04-2016 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PANTHER PTHR19271:SF9 1 221 1.0E-268 T 22-04-2016 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 8.1E-66 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81342 248 296 1.73E-92 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81342 6 221 1.73E-92 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PIRSF PIRSF038885 1 421 3.0E-152 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 5.1E-41 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Gene3D G3DSA:1.20.810.10 6 416 6.2E-158 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81648 297 412 1.13E-33 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PANTHER PTHR19271 247 418 1.0E-268 T 22-04-2016 VP0442 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PANTHER PTHR19271 1 221 1.0E-268 T 22-04-2016 VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.552 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 SUPERFAMILY SSF109635 8 107 1.7E-36 T 22-04-2016 VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 PANTHER PTHR33823 5 146 1.8E-67 T 22-04-2016 VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 PANTHER PTHR33823:SF2 5 146 1.8E-67 T 22-04-2016 VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 5.8E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 22-04-2016 VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 7.7E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VP2500 263ae69592a8e0cbfd5f39542ed8fb74 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VP2828 46609d35b69e038d62b3e82f42ad0e3a 295 SUPERFAMILY SSF103481 202 293 9.68E-11 T 22-04-2016 VP2828 46609d35b69e038d62b3e82f42ad0e3a 295 Pfam PF00892 EamA-like transporter family 156 294 3.7E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VP2828 46609d35b69e038d62b3e82f42ad0e3a 295 Pfam PF00892 EamA-like transporter family 4 135 7.1E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VP2828 46609d35b69e038d62b3e82f42ad0e3a 295 PANTHER PTHR22911 1 294 1.7E-89 T 22-04-2016 VP2828 46609d35b69e038d62b3e82f42ad0e3a 295 PANTHER PTHR22911:SF64 1 294 1.7E-89 T 22-04-2016 VP2828 46609d35b69e038d62b3e82f42ad0e3a 295 SUPERFAMILY SSF103481 36 140 5.1E-13 T 22-04-2016 VP2734 4a5441a8865cef142e0006be910e6dbf 358 SUPERFAMILY SSF50621 226 357 5.23E-47 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VP2734 4a5441a8865cef142e0006be910e6dbf 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.3E-39 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PANTHER PTHR30511 1 356 9.9E-236 T 22-04-2016 VP2734 4a5441a8865cef142e0006be910e6dbf 358 TIGRFAM TIGR00492 alr: alanine racemase 4 356 1.2E-128 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 60 78 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 155 166 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 339 352 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 249 264 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 266 281 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 192 219 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 287 304 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 120 132 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PRINTS PR00992 Alanine racemase signature 26 42 8.6E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 Gene3D G3DSA:2.40.37.10 215 357 7.1E-56 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VP2734 4a5441a8865cef142e0006be910e6dbf 358 Gene3D G3DSA:3.20.20.10 10 214 2.5E-72 T 22-04-2016 IPR029066 PLP-binding barrel VP2734 4a5441a8865cef142e0006be910e6dbf 358 SUPERFAMILY SSF51419 8 234 1.57E-70 T 22-04-2016 IPR029066 PLP-binding barrel VP2734 4a5441a8865cef142e0006be910e6dbf 358 SMART SM01005 233 357 8.0E-67 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 Hamap MF_01201 Alanine racemase. 1 357 34.734 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2734 4a5441a8865cef142e0006be910e6dbf 358 PANTHER PTHR30511:SF4 1 356 9.9E-236 T 22-04-2016 VP2734 4a5441a8865cef142e0006be910e6dbf 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 4.8E-70 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.66E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.66E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.66E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 SMART SM00411 1 90 6.6E-47 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 SUPERFAMILY SSF47729 1 90 6.04E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 PANTHER PTHR33175:SF4 1 91 1.2E-54 T 22-04-2016 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 Gene3D G3DSA:4.10.520.10 1 90 7.5E-38 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VP2911 c81625f4dbd0b79653f18dcd1c264df8 91 PANTHER PTHR33175 1 91 1.2E-54 T 22-04-2016 VP2485 3ab099e72d715e4fcc68bc76961f1cf4 296 SUPERFAMILY SSF53067 114 283 5.18E-43 T 22-04-2016 VP2485 3ab099e72d715e4fcc68bc76961f1cf4 296 PANTHER PTHR12862:SF5 4 277 7.9E-87 T 22-04-2016 VP2485 3ab099e72d715e4fcc68bc76961f1cf4 296 SUPERFAMILY SSF53067 1 111 4.92E-25 T 22-04-2016 VP2485 3ab099e72d715e4fcc68bc76961f1cf4 296 PANTHER PTHR12862 4 277 7.9E-87 T 22-04-2016 VP2485 3ab099e72d715e4fcc68bc76961f1cf4 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 6.1E-45 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VP2485 3ab099e72d715e4fcc68bc76961f1cf4 296 Gene3D G3DSA:3.30.420.40 2 77 1.4E-4 T 22-04-2016 VP1376 3b090dfb8f4974ef4ed76ac87d374e7f 157 Gene3D G3DSA:3.40.50.2300 5 131 7.0E-23 T 22-04-2016 VP1376 3b090dfb8f4974ef4ed76ac87d374e7f 157 SMART SM00448 4 125 1.1E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1376 3b090dfb8f4974ef4ed76ac87d374e7f 157 PANTHER PTHR26402 4 134 2.4E-57 T 22-04-2016 VP1376 3b090dfb8f4974ef4ed76ac87d374e7f 157 SUPERFAMILY SSF52172 2 132 1.31E-20 T 22-04-2016 IPR011006 CheY-like superfamily VP1376 3b090dfb8f4974ef4ed76ac87d374e7f 157 PANTHER PTHR26402:SF515 4 134 2.4E-57 T 22-04-2016 VP1376 3b090dfb8f4974ef4ed76ac87d374e7f 157 Pfam PF00072 Response regulator receiver domain 7 125 5.1E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0890 ea9f8b4999e4db9e35931036b61edc7e 571 PANTHER PTHR10859 12 255 5.9E-79 T 22-04-2016 VP0890 ea9f8b4999e4db9e35931036b61edc7e 571 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 264 560 2.6E-15 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP0890 ea9f8b4999e4db9e35931036b61edc7e 571 PANTHER PTHR10859:SF84 12 255 5.9E-79 T 22-04-2016 VP0890 ea9f8b4999e4db9e35931036b61edc7e 571 SUPERFAMILY SSF53448 11 240 2.44E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0890 ea9f8b4999e4db9e35931036b61edc7e 571 Gene3D G3DSA:3.90.550.10 12 127 5.0E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0890 ea9f8b4999e4db9e35931036b61edc7e 571 Pfam PF00535 Glycosyl transferase family 2 11 130 7.3E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 Gene3D G3DSA:3.40.50.1440 14 214 2.5E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 SUPERFAMILY SSF55307 204 320 7.33E-43 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 PANTHER PTHR30314:SF3 1 407 4.2E-203 T 22-04-2016 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 396 38.212 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 SMART SM00864 13 205 8.2E-113 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 331 1.3E-136 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 PANTHER PTHR30314 1 407 4.2E-203 T 22-04-2016 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 Pfam PF12327 FtsZ family, C-terminal domain 222 316 3.2E-36 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 SMART SM00865 207 325 2.9E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 Gene3D G3DSA:3.30.1330.20 215 321 2.6E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 SUPERFAMILY SSF52490 13 208 8.24E-70 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.7E-40 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.1E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.1E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.1E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VP0464 b9cc649ae8f4331fff514f0ae9061d26 409 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.1E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VP2050 e7466e775fa107987682621ed482a6ff 338 PANTHER PTHR30518 1 335 3.6E-89 T 22-04-2016 VP2050 e7466e775fa107987682621ed482a6ff 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 336 2.0E-101 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VP2050 e7466e775fa107987682621ed482a6ff 338 PANTHER PTHR30518:SF2 1 335 3.6E-89 T 22-04-2016 VP2050 e7466e775fa107987682621ed482a6ff 338 Pfam PF02618 YceG-like family 43 328 1.3E-82 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VP2050 e7466e775fa107987682621ed482a6ff 338 Gene3D G3DSA:3.30.160.60 302 337 2.2E-19 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VP2050 e7466e775fa107987682621ed482a6ff 338 Gene3D G3DSA:3.30.160.60 73 110 1.6E-15 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VP2410 a60088288673e7af89e085e8e0e50b8d 313 PANTHER PTHR35007 9 312 7.7E-59 T 22-04-2016 VP2410 a60088288673e7af89e085e8e0e50b8d 313 PANTHER PTHR35007:SF2 9 312 7.7E-59 T 22-04-2016 VP2410 a60088288673e7af89e085e8e0e50b8d 313 Pfam PF00482 Type II secretion system (T2SS), protein F 172 299 2.9E-23 T 22-04-2016 IPR018076 Type II secretion system F domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 SUPERFAMILY SSF50630 219 340 1.91E-19 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 SUPERFAMILY SSF50630 491 617 2.18E-31 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 Pfam PF05618 Putative ATP-dependant zinc protease 499 620 1.0E-23 T 22-04-2016 VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 PANTHER PTHR38037 499 626 1.9E-20 T 22-04-2016 VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 SUPERFAMILY SSF50630 116 211 8.45E-22 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 SUPERFAMILY SSF50630 42 82 8.45E-22 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 Gene3D G3DSA:2.40.70.10 357 449 2.8E-4 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 Gene3D G3DSA:2.40.70.10 122 203 3.1E-35 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 Gene3D G3DSA:2.40.70.10 216 334 2.6E-22 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 Gene3D G3DSA:2.40.70.10 39 88 3.1E-35 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 Gene3D G3DSA:2.40.70.10 491 610 3.4E-35 T 22-04-2016 IPR021109 Aspartic peptidase domain VP0151 fbf4d9c9385ce7deb44ef5be60569353 626 SUPERFAMILY SSF50630 357 482 4.44E-10 T 22-04-2016 IPR021109 Aspartic peptidase domain VP1106 470181e945527855d6ec7890d8569533 208 SUPERFAMILY SSF89392 30 207 1.65E-51 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VP1106 470181e945527855d6ec7890d8569533 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.901 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VP1106 470181e945527855d6ec7890d8569533 208 PANTHER PTHR35869 13 208 5.5E-51 T 22-04-2016 VP1106 470181e945527855d6ec7890d8569533 208 Gene3D G3DSA:2.50.20.10 30 207 5.0E-54 T 22-04-2016 VP1106 470181e945527855d6ec7890d8569533 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 196 5.9E-56 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VP1106 470181e945527855d6ec7890d8569533 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 5.6E-63 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VP1015 ce11678c80168524d487c31cfac3300f 346 Pfam PF00144 Beta-lactamase 47 323 2.1E-30 T 22-04-2016 IPR001466 Beta-lactamase-related VP1015 ce11678c80168524d487c31cfac3300f 346 Gene3D G3DSA:3.40.710.10 19 337 4.4E-53 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP1015 ce11678c80168524d487c31cfac3300f 346 SUPERFAMILY SSF56601 3 339 2.51E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP1015 ce11678c80168524d487c31cfac3300f 346 PANTHER PTHR22935 75 325 2.0E-43 T 22-04-2016 VP0355 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SMART SM00345 12 70 1.1E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP0355 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 2.0E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VP0355 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Pfam PF07729 FCD domain 80 207 3.2E-7 T 22-04-2016 IPR011711 GntR, C-terminal VP0355 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Gene3D G3DSA:1.20.120.530 76 219 1.7E-13 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP0355 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Gene3D G3DSA:1.10.10.10 4 72 2.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0355 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SUPERFAMILY SSF48008 77 215 4.71E-7 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VP0355 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SUPERFAMILY SSF46785 4 74 2.47E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0479 a33a7457d9def6e51ca8524b74a7fedf 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 2.1E-100 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VP0479 a33a7457d9def6e51ca8524b74a7fedf 231 PANTHER PTHR21234:SF16 1 228 1.5E-64 T 22-04-2016 VP0479 a33a7457d9def6e51ca8524b74a7fedf 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.007 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VP0479 a33a7457d9def6e51ca8524b74a7fedf 231 Gene3D G3DSA:3.40.50.1580 1 230 4.7E-80 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP0479 a33a7457d9def6e51ca8524b74a7fedf 231 SUPERFAMILY SSF53167 1 229 8.51E-74 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP0479 a33a7457d9def6e51ca8524b74a7fedf 231 PANTHER PTHR21234 1 228 1.5E-64 T 22-04-2016 IPR018017 Nucleoside phosphorylase VP0479 a33a7457d9def6e51ca8524b74a7fedf 231 Pfam PF01048 Phosphorylase superfamily 2 227 6.2E-49 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP1834 c787e1210ef7631e2c82d3f055f751e5 80 SUPERFAMILY SSF101386 4 79 8.34E-18 T 22-04-2016 VP1834 c787e1210ef7631e2c82d3f055f751e5 80 Gene3D G3DSA:1.10.287.1080 6 68 1.9E-15 T 22-04-2016 VP1834 c787e1210ef7631e2c82d3f055f751e5 80 PANTHER PTHR14552 13 80 7.3E-12 T 22-04-2016 VP1834 c787e1210ef7631e2c82d3f055f751e5 80 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 6 67 1.2E-9 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VP0255 4173539f4513e37e52a3ecd2869efe15 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0255 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0255 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.1E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0255 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.1E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0255 4173539f4513e37e52a3ecd2869efe15 73 Pfam PF01197 Ribosomal protein L31 1 66 3.4E-32 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0255 4173539f4513e37e52a3ecd2869efe15 73 PANTHER PTHR33280:SF2 1 66 6.0E-37 T 22-04-2016 VP0255 4173539f4513e37e52a3ecd2869efe15 73 SUPERFAMILY SSF143800 1 68 2.63E-27 T 22-04-2016 VP0255 4173539f4513e37e52a3ecd2869efe15 73 PANTHER PTHR33280 1 66 6.0E-37 T 22-04-2016 VP0255 4173539f4513e37e52a3ecd2869efe15 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.484 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0255 4173539f4513e37e52a3ecd2869efe15 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.1E-35 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2115 036d82cb29b663d3e81f3a2f852801da 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP2115 036d82cb29b663d3e81f3a2f852801da 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP2115 036d82cb29b663d3e81f3a2f852801da 441 Pfam PF03553 Na+/H+ antiporter family 150 435 3.2E-75 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VP2115 036d82cb29b663d3e81f3a2f852801da 441 PANTHER PTHR37821 1 441 1.1E-191 T 22-04-2016 VP2115 036d82cb29b663d3e81f3a2f852801da 441 Pfam PF13726 Na+-H+ antiporter family 2 88 9.6E-36 T 22-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal VP0423 06c3f8ac32971428f86f653c24a405fd 947 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 30 944 19.161 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 VP0423 06c3f8ac32971428f86f653c24a405fd 947 SUPERFAMILY SSF81593 818 946 3.3E-32 T 22-04-2016 VP0423 06c3f8ac32971428f86f653c24a405fd 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 7.2E-98 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VP0423 06c3f8ac32971428f86f653c24a405fd 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 1.6E-94 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VP0423 06c3f8ac32971428f86f653c24a405fd 947 SUPERFAMILY SSF81593 290 439 4.79E-42 T 22-04-2016 VP0423 06c3f8ac32971428f86f653c24a405fd 947 Gene3D G3DSA:3.30.460.10 642 815 1.3E-58 T 22-04-2016 VP0423 06c3f8ac32971428f86f653c24a405fd 947 Gene3D G3DSA:3.30.460.10 115 288 3.0E-61 T 22-04-2016 VP0423 06c3f8ac32971428f86f653c24a405fd 947 Pfam PF08335 GlnD PII-uridylyltransferase 830 912 3.0E-7 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VP0423 06c3f8ac32971428f86f653c24a405fd 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 3.3E-44 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VP0423 06c3f8ac32971428f86f653c24a405fd 947 SUPERFAMILY SSF81301 23 289 5.23E-88 T 22-04-2016 VP0423 06c3f8ac32971428f86f653c24a405fd 947 SUPERFAMILY SSF81301 528 818 3.27E-88 T 22-04-2016 VP0423 06c3f8ac32971428f86f653c24a405fd 947 PANTHER PTHR30621 7 945 0.0 T 22-04-2016 VP1203 4b82fe1e8898a391f415ff64da87d695 148 PANTHER PTHR35535 3 148 4.0E-30 T 22-04-2016 VP1203 4b82fe1e8898a391f415ff64da87d695 148 Pfam PF03724 META domain 34 141 7.5E-28 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ VP2325 034b6e57f8e6b1d46d66756be9f3cafb 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 3.0E-30 T 22-04-2016 IPR021732 Protein of unknown function DUF3301 VP2628 10319446766a2c160e097d6858847d6a 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VP2628 10319446766a2c160e097d6858847d6a 379 SUPERFAMILY SSF53955 188 371 2.34E-36 T 22-04-2016 IPR023346 Lysozyme-like domain VP2628 10319446766a2c160e097d6858847d6a 379 Gene3D G3DSA:1.10.530.10 181 374 9.6E-43 T 22-04-2016 VP2628 10319446766a2c160e097d6858847d6a 379 PANTHER PTHR21666 190 376 3.0E-47 T 22-04-2016 VP2628 10319446766a2c160e097d6858847d6a 379 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 1.6E-79 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal VP2628 10319446766a2c160e097d6858847d6a 379 PANTHER PTHR21666:SF224 190 376 3.0E-47 T 22-04-2016 VP2628 10319446766a2c160e097d6858847d6a 379 Pfam PF01464 Transglycosylase SLT domain 211 332 3.8E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VP0928 11b801916204d859855766e48e8d156b 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 4 427 36.873 T 22-04-2016 VP0928 11b801916204d859855766e48e8d156b 435 PANTHER PTHR11236:SF3 38 425 1.9E-125 T 22-04-2016 VP0928 11b801916204d859855766e48e8d156b 435 Pfam PF00425 chorismate binding enzyme 165 417 5.5E-71 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VP0928 11b801916204d859855766e48e8d156b 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 1.4E-102 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VP0928 11b801916204d859855766e48e8d156b 435 Gene3D G3DSA:3.60.120.10 15 426 2.1E-89 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VP0928 11b801916204d859855766e48e8d156b 435 SUPERFAMILY SSF56322 30 425 3.27E-99 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VP0928 11b801916204d859855766e48e8d156b 435 PANTHER PTHR11236 38 425 1.9E-125 T 22-04-2016 VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 Gene3D G3DSA:3.30.70.920 56 140 1.7E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 PANTHER PTHR30154:SF17 1 154 6.5E-90 T 22-04-2016 VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.6E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.6E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.6E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 PANTHER PTHR30154 1 154 6.5E-90 T 22-04-2016 VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 SUPERFAMILY SSF54909 63 152 1.57E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 SUPERFAMILY SSF46785 2 61 1.55E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.7E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.0E-17 T 22-04-2016 VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 SMART SM00344 3 112 6.5E-44 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VP0947 6fc3c087ea031cc4346dd48d5d34b5ec 154 Gene3D G3DSA:1.10.10.10 4 55 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1940 6ee14c23292c7c08a9c03a58c543779d 377 SUPERFAMILY SSF51419 14 242 5.23E-42 T 22-04-2016 IPR029066 PLP-binding barrel VP1940 6ee14c23292c7c08a9c03a58c543779d 377 SUPERFAMILY SSF50621 212 359 6.49E-23 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VP1940 6ee14c23292c7c08a9c03a58c543779d 377 PANTHER PTHR11482:SF38 1 377 8.4E-184 T 22-04-2016 VP1940 6ee14c23292c7c08a9c03a58c543779d 377 PIRSF PIRSF038941 1 372 1.3E-125 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VP1940 6ee14c23292c7c08a9c03a58c543779d 377 PANTHER PTHR11482 1 377 8.4E-184 T 22-04-2016 VP1940 6ee14c23292c7c08a9c03a58c543779d 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.9E-162 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VP1940 6ee14c23292c7c08a9c03a58c543779d 377 Gene3D G3DSA:3.20.20.10 32 236 1.7E-17 T 22-04-2016 IPR029066 PLP-binding barrel VP1940 6ee14c23292c7c08a9c03a58c543779d 377 Gene3D G3DSA:2.40.37.10 237 348 2.0E-13 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 2.4E-170 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 Gene3D G3DSA:1.20.58.180 216 299 2.5E-36 T 22-04-2016 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 SUPERFAMILY SSF55681 8 293 5.14E-132 T 22-04-2016 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 PANTHER PTHR30075 1 303 7.0E-274 T 22-04-2016 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.667 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 Gene3D G3DSA:3.30.930.10 4 215 2.8E-104 T 22-04-2016 VP0022 7fd6a24837091f8c0b4c2fb703898e54 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 1.8E-148 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VP0256 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VP0256 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.6E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VP0256 b67c847ad62a5c40d2c05037ccb34615 103 PANTHER PTHR11700 1 102 1.2E-54 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VP0256 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0256 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VP0256 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.33E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VP0256 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.33E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VP0256 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.33E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VP0256 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VP0256 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 3 102 1.1E-43 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VP0256 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VP0251 46ffd02714fe52feb90c9585bc66328a 181 Gene3D G3DSA:3.30.70.1070 103 177 4.7E-26 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP0251 46ffd02714fe52feb90c9585bc66328a 181 Pfam PF05036 Sporulation related domain 107 176 3.2E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP0251 46ffd02714fe52feb90c9585bc66328a 181 SUPERFAMILY SSF110997 106 177 3.4E-17 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VP0251 46ffd02714fe52feb90c9585bc66328a 181 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 100 1.5E-31 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 VP0251 46ffd02714fe52feb90c9585bc66328a 181 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 100 178 7.5E-33 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 VP2180 70a9756154c715a099543e5a40cce46a 181 SUPERFAMILY SSF53271 11 178 2.02E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2180 70a9756154c715a099543e5a40cce46a 181 PANTHER PTHR32315 1 181 1.0E-80 T 22-04-2016 VP2180 70a9756154c715a099543e5a40cce46a 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 1.3E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VP2180 70a9756154c715a099543e5a40cce46a 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.3E-72 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VP2180 70a9756154c715a099543e5a40cce46a 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.806 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VP2180 70a9756154c715a099543e5a40cce46a 181 Gene3D G3DSA:3.40.50.2020 5 179 4.6E-69 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP1774 5a37e99f2fce6ab256a09fddd28c37af 288 PANTHER PTHR23088:SF11 1 286 3.6E-133 T 22-04-2016 VP1774 5a37e99f2fce6ab256a09fddd28c37af 288 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 2.4E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP1774 5a37e99f2fce6ab256a09fddd28c37af 288 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.1E-143 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 VP1774 5a37e99f2fce6ab256a09fddd28c37af 288 SUPERFAMILY SSF56317 4 281 2.49E-83 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP1774 5a37e99f2fce6ab256a09fddd28c37af 288 PANTHER PTHR23088 1 286 3.6E-133 T 22-04-2016 VP1774 5a37e99f2fce6ab256a09fddd28c37af 288 Gene3D G3DSA:3.60.110.10 3 282 1.4E-95 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP1871 8a8c83308d112108184946af6e45bdf3 458 Gene3D G3DSA:3.40.50.300 17 30 0.001 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1871 8a8c83308d112108184946af6e45bdf3 458 Gene3D G3DSA:3.40.50.300 110 136 0.001 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1871 8a8c83308d112108184946af6e45bdf3 458 Gene3D G3DSA:3.40.50.300 263 344 5.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1871 8a8c83308d112108184946af6e45bdf3 458 Gene3D G3DSA:3.40.50.300 31 56 5.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1871 8a8c83308d112108184946af6e45bdf3 458 PIRSF PIRSF019381 1 458 7.6E-202 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VP1871 8a8c83308d112108184946af6e45bdf3 458 PANTHER PTHR38605 1 458 1.3E-226 T 22-04-2016 VP1871 8a8c83308d112108184946af6e45bdf3 458 Pfam PF04317 YcjX-like family, DUF463 20 457 4.5E-190 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VP1871 8a8c83308d112108184946af6e45bdf3 458 PANTHER PTHR38605:SF1 1 458 1.3E-226 T 22-04-2016 VP1442 8910979244f9d1c98af602a9dbb48278 176 SUPERFAMILY SSF53098 4 175 1.1E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1442 8910979244f9d1c98af602a9dbb48278 176 PANTHER PTHR23044:SF5 1 176 2.5E-58 T 22-04-2016 VP1442 8910979244f9d1c98af602a9dbb48278 176 PANTHER PTHR23044 1 176 2.5E-58 T 22-04-2016 VP1442 8910979244f9d1c98af602a9dbb48278 176 SMART SM00479 5 176 6.9E-5 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP1442 8910979244f9d1c98af602a9dbb48278 176 Pfam PF00929 Exonuclease 7 171 5.5E-12 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP1442 8910979244f9d1c98af602a9dbb48278 176 Gene3D G3DSA:3.30.420.10 3 176 2.0E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2462 6410219e495a87d75f2ee19b99e8d578 276 PANTHER PTHR20941 1 275 2.9E-125 T 22-04-2016 VP2462 6410219e495a87d75f2ee19b99e8d578 276 Pfam PF00809 Pterin binding enzyme 18 257 7.0E-90 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VP2462 6410219e495a87d75f2ee19b99e8d578 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VP2462 6410219e495a87d75f2ee19b99e8d578 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 2.3E-102 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 VP2462 6410219e495a87d75f2ee19b99e8d578 276 PANTHER PTHR20941:SF1 1 275 2.9E-125 T 22-04-2016 VP2462 6410219e495a87d75f2ee19b99e8d578 276 Gene3D G3DSA:3.20.20.20 12 274 4.4E-109 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VP2462 6410219e495a87d75f2ee19b99e8d578 276 SUPERFAMILY SSF51717 2 274 2.75E-104 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VP2462 6410219e495a87d75f2ee19b99e8d578 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VP1650 f9c5810b1a1f8bb7a2e4df1950d59765 138 PANTHER PTHR33337 9 118 4.2E-13 T 22-04-2016 VP1650 f9c5810b1a1f8bb7a2e4df1950d59765 138 Gene3D G3DSA:3.90.1590.10 5 135 3.9E-30 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 VP1650 f9c5810b1a1f8bb7a2e4df1950d59765 138 SUPERFAMILY SSF51316 7 127 7.01E-32 T 22-04-2016 IPR011057 Mss4-like VP1650 f9c5810b1a1f8bb7a2e4df1950d59765 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 110 2.7E-14 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 VP2630 303f307a71406b04a7c4472db4c4547b 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VP2630 303f307a71406b04a7c4472db4c4547b 477 Gene3D G3DSA:3.40.605.10 18 263 2.7E-88 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP2630 303f307a71406b04a7c4472db4c4547b 477 SUPERFAMILY SSF53720 15 474 1.44E-153 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP2630 303f307a71406b04a7c4472db4c4547b 477 Pfam PF00171 Aldehyde dehydrogenase family 22 470 9.0E-159 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP2630 303f307a71406b04a7c4472db4c4547b 477 PANTHER PTHR11699:SF49 24 473 3.8E-235 T 22-04-2016 VP2630 303f307a71406b04a7c4472db4c4547b 477 PIRSF PIRSF036492 7 474 1.5E-83 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 VP2630 303f307a71406b04a7c4472db4c4547b 477 Gene3D G3DSA:3.40.309.10 264 446 1.7E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP2630 303f307a71406b04a7c4472db4c4547b 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VP2630 303f307a71406b04a7c4472db4c4547b 477 PANTHER PTHR11699 24 473 3.8E-235 T 22-04-2016 VP0233 2c8ea598c5c1c938217eebdb420c2618 220 PANTHER PTHR12725 10 219 1.4E-17 T 22-04-2016 VP0233 2c8ea598c5c1c938217eebdb420c2618 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 183 4.0E-14 T 22-04-2016 IPR023214 HAD-like domain VP0233 2c8ea598c5c1c938217eebdb420c2618 220 Gene3D G3DSA:3.40.50.1000 85 215 1.7E-15 T 22-04-2016 IPR023214 HAD-like domain VP0233 2c8ea598c5c1c938217eebdb420c2618 220 Gene3D G3DSA:3.40.50.1000 5 19 1.7E-15 T 22-04-2016 IPR023214 HAD-like domain VP0233 2c8ea598c5c1c938217eebdb420c2618 220 PANTHER PTHR12725:SF69 10 219 1.4E-17 T 22-04-2016 VP0233 2c8ea598c5c1c938217eebdb420c2618 220 SUPERFAMILY SSF56784 8 219 5.8E-18 T 22-04-2016 IPR023214 HAD-like domain VP1053 598f6e25d0c8d028f067b3ad6ca37fad 538 PANTHER PTHR30365 7 320 1.6E-277 T 22-04-2016 VP1053 598f6e25d0c8d028f067b3ad6ca37fad 538 PANTHER PTHR30365 386 530 1.6E-277 T 22-04-2016 VP1053 598f6e25d0c8d028f067b3ad6ca37fad 538 PANTHER PTHR30365:SF0 7 320 1.6E-277 T 22-04-2016 VP1053 598f6e25d0c8d028f067b3ad6ca37fad 538 PANTHER PTHR30365:SF0 386 530 1.6E-277 T 22-04-2016 VP1053 598f6e25d0c8d028f067b3ad6ca37fad 538 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 17 511 1.8E-178 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VP2775 83c2b1a4a8a0ececc59178eca1086de0 118 PANTHER PTHR38780 1 118 4.2E-42 T 22-04-2016 VP2775 83c2b1a4a8a0ececc59178eca1086de0 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 5.8E-46 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF VP2775 83c2b1a4a8a0ececc59178eca1086de0 118 SUPERFAMILY SSF75169 3 118 7.2E-36 T 22-04-2016 IPR027396 DsrEFH-like VP2775 83c2b1a4a8a0ececc59178eca1086de0 118 Gene3D G3DSA:3.40.1260.10 3 118 5.7E-45 T 22-04-2016 IPR027396 DsrEFH-like VP2775 83c2b1a4a8a0ececc59178eca1086de0 118 PANTHER PTHR38780:SF1 1 118 4.2E-42 T 22-04-2016 VP2775 83c2b1a4a8a0ececc59178eca1086de0 118 Pfam PF02635 DsrE/DsrF-like family 4 118 1.5E-25 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VP1067 cbf9e962668a54d981da775476875688 388 PANTHER PTHR30094 9 388 2.5E-126 T 22-04-2016 VP1067 cbf9e962668a54d981da775476875688 388 SUPERFAMILY SSF52440 174 280 1.55E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VP1067 cbf9e962668a54d981da775476875688 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.1E-156 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain VP1067 cbf9e962668a54d981da775476875688 388 SUPERFAMILY SSF56059 267 385 1.09E-83 T 22-04-2016 VP1067 cbf9e962668a54d981da775476875688 388 SUPERFAMILY SSF56059 1 169 1.09E-83 T 22-04-2016 VP1067 cbf9e962668a54d981da775476875688 388 PANTHER PTHR30094:SF5 9 388 2.5E-126 T 22-04-2016 VP2823 2951e2c2c5d74930b2451c9ca9cb5304 181 PANTHER PTHR11046:SF1 5 181 7.4E-122 T 22-04-2016 VP2823 2951e2c2c5d74930b2451c9ca9cb5304 181 Gene3D G3DSA:3.30.420.10 4 180 2.6E-76 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2823 2951e2c2c5d74930b2451c9ca9cb5304 181 PANTHER PTHR11046 5 181 7.4E-122 T 22-04-2016 VP2823 2951e2c2c5d74930b2451c9ca9cb5304 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.198 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 VP2823 2951e2c2c5d74930b2451c9ca9cb5304 181 SUPERFAMILY SSF53098 3 180 1.47E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP2823 2951e2c2c5d74930b2451c9ca9cb5304 181 SMART SM00479 7 180 3.9E-24 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP2823 2951e2c2c5d74930b2451c9ca9cb5304 181 Pfam PF00929 Exonuclease 9 170 2.5E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VP2053 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site VP2053 dae02ea0c2d3fe185e3522afe4186eaa 77 PANTHER PTHR20863 4 75 4.1E-31 T 22-04-2016 VP2053 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VP2053 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.1E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP2053 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP2053 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VP2053 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 3 75 3.5E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP1973 22962080cb90c0d4e8bc6516188c6a5d 130 PIRSF PIRSF007010 1 130 7.1E-53 T 22-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VP1973 22962080cb90c0d4e8bc6516188c6a5d 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 6.5E-49 T 22-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VP1949 1df16027c81df419de031db6ea97d473 106 SUPERFAMILY SSF102816 3 105 1.27E-49 T 22-04-2016 IPR007376 dsDNA mimic, putative VP1949 1df16027c81df419de031db6ea97d473 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.277 T 22-04-2016 IPR007376 dsDNA mimic, putative VP1949 1df16027c81df419de031db6ea97d473 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-50 T 22-04-2016 IPR007376 dsDNA mimic, putative VP1949 1df16027c81df419de031db6ea97d473 106 PIRSF PIRSF004916 1 105 2.1E-52 T 22-04-2016 IPR007376 dsDNA mimic, putative VP1949 1df16027c81df419de031db6ea97d473 106 Gene3D G3DSA:3.10.450.140 6 105 4.8E-46 T 22-04-2016 IPR007376 dsDNA mimic, putative VP1949 1df16027c81df419de031db6ea97d473 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.4E-45 T 22-04-2016 IPR007376 dsDNA mimic, putative VP0173 fc746f225d97ed2c0f74ed2c9d10836e 279 SUPERFAMILY SSF52540 1 251 8.48E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0173 fc746f225d97ed2c0f74ed2c9d10836e 279 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP0173 fc746f225d97ed2c0f74ed2c9d10836e 279 PANTHER PTHR24220 2 277 1.4E-128 T 22-04-2016 VP0173 fc746f225d97ed2c0f74ed2c9d10836e 279 SMART SM00382 29 238 4.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0173 fc746f225d97ed2c0f74ed2c9d10836e 279 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 269 3.6E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VP0173 fc746f225d97ed2c0f74ed2c9d10836e 279 Pfam PF00005 ABC transporter 20 180 1.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0173 fc746f225d97ed2c0f74ed2c9d10836e 279 Gene3D G3DSA:3.40.50.300 1 253 4.4E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0173 fc746f225d97ed2c0f74ed2c9d10836e 279 PANTHER PTHR24220:SF535 2 277 1.4E-128 T 22-04-2016 VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 1.2E-24 T 22-04-2016 VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 PANTHER PTHR10657:SF13 1 175 8.8E-170 T 22-04-2016 VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 PANTHER PTHR10657:SF13 203 518 8.8E-170 T 22-04-2016 VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 SUPERFAMILY SSF109998 203 245 1.57E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 SUPERFAMILY SSF109998 39 169 1.57E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 Gene3D G3DSA:3.10.50.40 262 386 4.4E-43 T 22-04-2016 VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 PANTHER PTHR10657 1 175 8.8E-170 T 22-04-2016 VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 PANTHER PTHR10657 203 518 8.8E-170 T 22-04-2016 VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 SUPERFAMILY SSF54534 225 361 1.77E-31 T 22-04-2016 VP0921 4ed59a5c9ddf876db84d5d376c1866b4 619 Pfam PF13624 SurA N-terminal domain 1 166 6.4E-51 T 22-04-2016 VP0063 0222c9bc261b18cc10fd8c36eab9fd86 174 Gene3D G3DSA:3.40.50.300 3 165 1.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0063 0222c9bc261b18cc10fd8c36eab9fd86 174 PANTHER PTHR11603 6 171 6.7E-82 T 22-04-2016 VP0063 0222c9bc261b18cc10fd8c36eab9fd86 174 SUPERFAMILY SSF52540 4 160 9.77E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0063 0222c9bc261b18cc10fd8c36eab9fd86 174 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 162 8.2E-64 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 VP0063 0222c9bc261b18cc10fd8c36eab9fd86 174 Pfam PF01202 Shikimate kinase 13 142 7.6E-14 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VP1992 6c99bd70ebe165a6be7ceee5cfff7735 324 PIRSF PIRSF034367 1 324 4.5E-198 T 22-04-2016 IPR015004 Protein of unknown function DUF1852 VP1992 6c99bd70ebe165a6be7ceee5cfff7735 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 3.6E-186 T 22-04-2016 IPR015004 Protein of unknown function DUF1852 VP0141 444653065fbaade9ab126da96777f9f8 404 SUPERFAMILY SSF53067 6 148 3.43E-42 T 22-04-2016 VP0141 444653065fbaade9ab126da96777f9f8 404 Pfam PF12693 GspL periplasmic domain 245 403 1.1E-54 T 22-04-2016 IPR025691 GspL periplasmic domain VP0141 444653065fbaade9ab126da96777f9f8 404 SUPERFAMILY SSF53067 150 239 1.19E-23 T 22-04-2016 VP0141 444653065fbaade9ab126da96777f9f8 404 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 402 1.3E-92 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VP0141 444653065fbaade9ab126da96777f9f8 404 PIRSF PIRSF015761 12 404 1.6E-38 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VP0141 444653065fbaade9ab126da96777f9f8 404 Pfam PF05134 Type II secretion system (T2SS), protein L 9 241 8.0E-86 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VP0924 5a0deebb732585909fcb72dc3fa6ce1e 202 PANTHER PTHR22936:SF18 42 192 3.7E-59 T 22-04-2016 VP0924 5a0deebb732585909fcb72dc3fa6ce1e 202 PANTHER PTHR22936:SF18 8 26 3.7E-59 T 22-04-2016 VP0924 5a0deebb732585909fcb72dc3fa6ce1e 202 Gene3D G3DSA:1.20.1540.10 24 192 7.5E-18 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VP0924 5a0deebb732585909fcb72dc3fa6ce1e 202 PANTHER PTHR22936 42 192 3.7E-59 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VP0924 5a0deebb732585909fcb72dc3fa6ce1e 202 PANTHER PTHR22936 8 26 3.7E-59 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VP0924 5a0deebb732585909fcb72dc3fa6ce1e 202 SUPERFAMILY SSF144091 22 192 1.07E-28 T 22-04-2016 VP0924 5a0deebb732585909fcb72dc3fa6ce1e 202 Pfam PF01694 Rhomboid family 53 192 1.7E-13 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VP0924 5a0deebb732585909fcb72dc3fa6ce1e 202 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 43 190 6.4E-49 T 22-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria VP2270 6377f1043d6d957ab78c810e3947a483 233 SUPERFAMILY SSF55166 19 175 1.02E-19 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VP2270 6377f1043d6d957ab78c810e3947a483 233 PANTHER PTHR34385:SF1 88 224 2.1E-46 T 22-04-2016 VP2270 6377f1043d6d957ab78c810e3947a483 233 PANTHER PTHR34385:SF1 1 69 2.1E-46 T 22-04-2016 VP2270 6377f1043d6d957ab78c810e3947a483 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 178 2.2E-37 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VP2270 6377f1043d6d957ab78c810e3947a483 233 PANTHER PTHR34385 88 224 2.1E-46 T 22-04-2016 VP2270 6377f1043d6d957ab78c810e3947a483 233 PANTHER PTHR34385 1 69 2.1E-46 T 22-04-2016 VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 PIRSF PIRSF038984 1 536 2.6E-239 T 22-04-2016 IPR028348 FAD dependent protein VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 PANTHER PTHR10617:SF52 471 533 5.9E-178 T 22-04-2016 VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 PANTHER PTHR10617:SF52 76 391 5.9E-178 T 22-04-2016 VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 SUPERFAMILY SSF51905 101 287 9.5E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 SUPERFAMILY SSF51905 480 531 9.5E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 Gene3D G3DSA:3.50.50.60 474 531 3.2E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 Gene3D G3DSA:3.50.50.60 101 289 3.2E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 PANTHER PTHR10617 471 533 5.9E-178 T 22-04-2016 VP0956 1ed8c4c1e6d23399a0c0fcc9ba034b77 539 PANTHER PTHR10617 76 391 5.9E-178 T 22-04-2016 VP2197 150d1fe6fece25ae37bc6962254c4d7e 174 Pfam PF03358 NADPH-dependent FMN reductase 1 135 9.0E-26 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VP2197 150d1fe6fece25ae37bc6962254c4d7e 174 SUPERFAMILY SSF52218 1 170 9.05E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2197 150d1fe6fece25ae37bc6962254c4d7e 174 Gene3D G3DSA:3.40.50.360 1 171 4.2E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2197 150d1fe6fece25ae37bc6962254c4d7e 174 PANTHER PTHR30543:SF6 1 173 8.3E-37 T 22-04-2016 VP2197 150d1fe6fece25ae37bc6962254c4d7e 174 PANTHER PTHR30543 1 173 8.3E-37 T 22-04-2016 VP1498 387205274ae6586a7736ffb465896e31 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1498 387205274ae6586a7736ffb465896e31 239 SMART SM00382 29 202 9.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1498 387205274ae6586a7736ffb465896e31 239 PANTHER PTHR24220 6 223 1.8E-125 T 22-04-2016 VP1498 387205274ae6586a7736ffb465896e31 239 SUPERFAMILY SSF52540 5 216 5.33E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1498 387205274ae6586a7736ffb465896e31 239 Gene3D G3DSA:3.40.50.300 5 217 3.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1498 387205274ae6586a7736ffb465896e31 239 Pfam PF00005 ABC transporter 25 165 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1498 387205274ae6586a7736ffb465896e31 239 PANTHER PTHR24220:SF542 6 223 1.8E-125 T 22-04-2016 VP0556 4bf940c6f3703d8491fc2c090b8d2908 108 Gene3D G3DSA:3.30.160.100 3 92 1.0E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VP0556 4bf940c6f3703d8491fc2c090b8d2908 108 PANTHER PTHR33231:SF3 1 108 2.2E-52 T 22-04-2016 VP0556 4bf940c6f3703d8491fc2c090b8d2908 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 4.5E-23 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VP0556 4bf940c6f3703d8491fc2c090b8d2908 108 PANTHER PTHR33231 1 108 2.2E-52 T 22-04-2016 VP0556 4bf940c6f3703d8491fc2c090b8d2908 108 SUPERFAMILY SSF69754 1 103 1.11E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VP0556 4bf940c6f3703d8491fc2c090b8d2908 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 5.0E-31 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VP0880 abec1ab7b19fb135c7959436e790446f 563 SUPERFAMILY SSF53335 7 168 2.32E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0880 abec1ab7b19fb135c7959436e790446f 563 Gene3D G3DSA:3.40.50.150 20 173 1.8E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0880 abec1ab7b19fb135c7959436e790446f 563 Pfam PF13395 HNH endonuclease 454 492 6.2E-5 T 22-04-2016 IPR003615 HNH nuclease VP0880 abec1ab7b19fb135c7959436e790446f 563 PANTHER PTHR10108 36 141 3.4E-13 T 22-04-2016 VP0880 abec1ab7b19fb135c7959436e790446f 563 PANTHER PTHR10108 1 20 3.4E-13 T 22-04-2016 VP0880 abec1ab7b19fb135c7959436e790446f 563 Pfam PF13489 Methyltransferase domain 35 169 3.4E-11 T 22-04-2016 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.4E-91 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 PIRSF PIRSF000164 10 336 3.2E-106 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 Gene3D G3DSA:3.20.20.70 1 336 9.7E-130 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 PANTHER PTHR11938 11 335 1.5E-100 T 22-04-2016 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.3E-146 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.614 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 SUPERFAMILY SSF51395 1 336 2.47E-109 T 22-04-2016 VP1601 30aaf8cd38b8df13903ccffe8beaa5a2 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VP1511 f3726d4207e474db61a4d9fecbbb0ffc 208 SUPERFAMILY SSF89155 4 189 8.24E-53 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1511 f3726d4207e474db61a4d9fecbbb0ffc 208 Pfam PF02613 Nitrate reductase delta subunit 43 156 6.9E-30 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1511 f3726d4207e474db61a4d9fecbbb0ffc 208 PANTHER PTHR34227:SF4 9 199 1.4E-79 T 22-04-2016 VP1511 f3726d4207e474db61a4d9fecbbb0ffc 208 PANTHER PTHR34227 9 199 1.4E-79 T 22-04-2016 VP1511 f3726d4207e474db61a4d9fecbbb0ffc 208 Gene3D G3DSA:1.10.3480.10 3 192 9.3E-52 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1010 f7f507343ba1b86a8a977ea9c1321823 238 SUPERFAMILY SSF55120 53 236 6.24E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1010 f7f507343ba1b86a8a977ea9c1321823 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VP1010 f7f507343ba1b86a8a977ea9c1321823 238 Pfam PF00849 RNA pseudouridylate synthase 63 207 6.3E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1010 f7f507343ba1b86a8a977ea9c1321823 238 PANTHER PTHR21600:SF23 49 164 2.3E-88 T 22-04-2016 VP1010 f7f507343ba1b86a8a977ea9c1321823 238 PANTHER PTHR21600:SF23 181 236 2.3E-88 T 22-04-2016 VP1010 f7f507343ba1b86a8a977ea9c1321823 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 237 2.4E-58 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VP1010 f7f507343ba1b86a8a977ea9c1321823 238 PANTHER PTHR21600 49 164 2.3E-88 T 22-04-2016 VP1010 f7f507343ba1b86a8a977ea9c1321823 238 PANTHER PTHR21600 181 236 2.3E-88 T 22-04-2016 VP2116 53d7bc3a53c6775611fd041d2e4fd0bf 209 Gene3D G3DSA:1.10.472.60 54 161 2.2E-35 T 22-04-2016 IPR023169 UPF0413, central domain VP2116 53d7bc3a53c6775611fd041d2e4fd0bf 209 Gene3D G3DSA:3.40.30.10 162 181 1.0E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2116 53d7bc3a53c6775611fd041d2e4fd0bf 209 Gene3D G3DSA:3.40.30.10 9 53 1.0E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2116 53d7bc3a53c6775611fd041d2e4fd0bf 209 Pfam PF13743 Thioredoxin 6 175 1.6E-22 T 22-04-2016 VP2116 53d7bc3a53c6775611fd041d2e4fd0bf 209 SUPERFAMILY SSF52833 1 184 3.28E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0634 3924744742e534ca25c9e59c1a7383c0 510 PANTHER PTHR23088:SF12 209 508 1.4E-125 T 22-04-2016 VP0634 3924744742e534ca25c9e59c1a7383c0 510 PANTHER PTHR23088 209 508 1.4E-125 T 22-04-2016 VP0634 3924744742e534ca25c9e59c1a7383c0 510 SUPERFAMILY SSF56317 222 491 2.88E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0634 3924744742e534ca25c9e59c1a7383c0 510 Gene3D G3DSA:3.40.630.30 9 191 1.1E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0634 3924744742e534ca25c9e59c1a7383c0 510 Pfam PF00795 Carbon-nitrogen hydrolase 225 484 7.8E-35 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0634 3924744742e534ca25c9e59c1a7383c0 510 Gene3D G3DSA:3.60.110.10 220 505 6.6E-61 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0634 3924744742e534ca25c9e59c1a7383c0 510 SUPERFAMILY SSF55729 5 140 6.35E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0634 3924744742e534ca25c9e59c1a7383c0 510 Pfam PF00583 Acetyltransferase (GNAT) family 56 145 1.2E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 PANTHER PTHR30371 5 246 3.8E-112 T 22-04-2016 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 241 18.332 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.3E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.3E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.3E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.3E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 PANTHER PTHR30371:SF0 5 246 3.8E-112 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 ProSitePatterns PS01218 TatC family signature. 155 174 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.3E-76 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VP0100 44c5601353e3ee3bae0119b1322ad3b7 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.0E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VP0646 22d0639a5e0254214945d920c3117424 115 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.788 T 22-04-2016 IPR005346 RnfH protein VP0646 22d0639a5e0254214945d920c3117424 115 Gene3D G3DSA:3.10.20.280 2 92 8.8E-38 T 22-04-2016 IPR005346 RnfH protein VP0646 22d0639a5e0254214945d920c3117424 115 PANTHER PTHR37483:SF1 5 110 7.1E-45 T 22-04-2016 VP0646 22d0639a5e0254214945d920c3117424 115 SUPERFAMILY SSF54285 6 82 6.54E-26 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VP0646 22d0639a5e0254214945d920c3117424 115 PANTHER PTHR37483 5 110 7.1E-45 T 22-04-2016 VP0646 22d0639a5e0254214945d920c3117424 115 Pfam PF03658 RnfH family Ubiquitin 8 90 5.0E-34 T 22-04-2016 IPR005346 RnfH protein VP2353 3be91933d2910760e7426ccda042773d 385 PANTHER PTHR18895 82 376 3.1E-126 T 22-04-2016 VP2353 3be91933d2910760e7426ccda042773d 385 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.763 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP2353 3be91933d2910760e7426ccda042773d 385 Gene3D G3DSA:3.40.50.150 193 373 2.3E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2353 3be91933d2910760e7426ccda042773d 385 Pfam PF05175 Methyltransferase small domain 200 373 1.6E-55 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VP2353 3be91933d2910760e7426ccda042773d 385 SUPERFAMILY SSF53335 194 370 1.59E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2353 3be91933d2910760e7426ccda042773d 385 PANTHER PTHR18895:SF6 82 376 3.1E-126 T 22-04-2016 VP2353 3be91933d2910760e7426ccda042773d 385 Pfam PF08468 Methyltransferase small domain N-terminal 48 165 4.0E-5 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP2353 3be91933d2910760e7426ccda042773d 385 PIRSF PIRSF037565 1 377 9.2E-173 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VP0400 cadc8bb276899cb76b7fdaa6e5d5f136 271 Gene3D G3DSA:3.30.65.10 233 268 9.0E-7 T 22-04-2016 VP0400 cadc8bb276899cb76b7fdaa6e5d5f136 271 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 233 269 1.7E-9 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VP0400 cadc8bb276899cb76b7fdaa6e5d5f136 271 Gene3D G3DSA:3.40.1350.10 94 212 1.2E-29 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VP0400 cadc8bb276899cb76b7fdaa6e5d5f136 271 PANTHER PTHR30015 31 225 6.1E-24 T 22-04-2016 VP0400 cadc8bb276899cb76b7fdaa6e5d5f136 271 SUPERFAMILY SSF57783 230 268 6.46E-6 T 22-04-2016 VP0400 cadc8bb276899cb76b7fdaa6e5d5f136 271 Pfam PF04471 Restriction endonuclease 100 210 4.9E-28 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VP0400 cadc8bb276899cb76b7fdaa6e5d5f136 271 SUPERFAMILY SSF52980 103 214 5.01E-29 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VP0713 e7bd4ff2a4fe7ae5a107ce7244b98be7 506 Gene3D G3DSA:1.10.10.10 16 113 2.9E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0713 e7bd4ff2a4fe7ae5a107ce7244b98be7 506 PANTHER PTHR26402:SF557 183 311 6.7E-35 T 22-04-2016 VP0713 e7bd4ff2a4fe7ae5a107ce7244b98be7 506 PANTHER PTHR26402:SF557 15 119 6.7E-35 T 22-04-2016 VP0713 e7bd4ff2a4fe7ae5a107ce7244b98be7 506 PANTHER PTHR26402 183 311 6.7E-35 T 22-04-2016 VP0713 e7bd4ff2a4fe7ae5a107ce7244b98be7 506 PANTHER PTHR26402 15 119 6.7E-35 T 22-04-2016 VP0713 e7bd4ff2a4fe7ae5a107ce7244b98be7 506 SMART SM00862 31 111 5.9E-7 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0713 e7bd4ff2a4fe7ae5a107ce7244b98be7 506 SUPERFAMILY SSF46894 9 112 1.5E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP0713 e7bd4ff2a4fe7ae5a107ce7244b98be7 506 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 2.3E-11 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0084 221edd3b6ff04cee70e14edbdcca5857 143 Pfam PF01814 Hemerythrin HHE cation binding domain 4 121 8.6E-12 T 22-04-2016 IPR012312 Haemerythrin-like VP0084 221edd3b6ff04cee70e14edbdcca5857 143 Gene3D G3DSA:1.20.120.520 31 137 5.8E-9 T 22-04-2016 VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 SUPERFAMILY SSF53092 14 139 9.07E-13 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 Gene3D G3DSA:3.90.230.10 305 563 1.1E-55 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 7.5E-40 T 22-04-2016 VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 PANTHER PTHR10804:SF87 3 185 1.0E-180 T 22-04-2016 VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 PANTHER PTHR10804:SF87 286 594 1.0E-180 T 22-04-2016 VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 PANTHER PTHR10804 3 185 1.0E-180 T 22-04-2016 VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 PANTHER PTHR10804 286 594 1.0E-180 T 22-04-2016 VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 Gene3D G3DSA:3.40.350.10 173 275 1.7E-8 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 Gene3D G3DSA:3.40.350.10 7 140 1.8E-23 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 SUPERFAMILY SSF53092 164 237 7.32E-5 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 SUPERFAMILY SSF55920 308 562 1.57E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 Pfam PF16188 C-terminal region of peptidase_M24 537 594 3.1E-22 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 Pfam PF00557 Metallopeptidase family M24 325 526 1.3E-42 T 22-04-2016 IPR000994 Peptidase M24, structural domain VP1342 1dca480cbca6a0e7c1259c3c5cb8586e 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 136 6.8E-21 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 SUPERFAMILY SSF52540 197 869 2.13E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Gene3D G3DSA:1.10.10.160 334 389 7.1E-6 T 22-04-2016 IPR013986 DExx box DNA helicase domain VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Pfam PF13361 UvrD-like helicase C-terminal domain 486 607 7.7E-14 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Pfam PF13361 UvrD-like helicase C-terminal domain 711 846 8.7E-17 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 PANTHER PTHR11070 824 846 7.1E-101 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 PANTHER PTHR11070 743 805 7.1E-101 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 PANTHER PTHR11070 197 720 7.1E-101 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Gene3D G3DSA:3.40.50.300 489 595 9.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Gene3D G3DSA:3.40.50.300 765 869 9.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 467 2.5E-56 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Pfam PF06114 Domain of unknown function (DUF955) 36 175 5.3E-28 T 22-04-2016 IPR010359 HTH domain, IrrE-type VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Pfam PF12705 PD-(D/E)XK nuclease superfamily 904 1120 4.7E-5 T 22-04-2016 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Gene3D G3DSA:1.10.486.10 596 724 1.7E-4 T 22-04-2016 VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Gene3D G3DSA:3.40.50.300 390 479 2.9E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1083 72b754a7e8191b173d5a49f74bf6538d 1139 Gene3D G3DSA:3.40.50.300 197 333 2.9E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 4.7E-57 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 SUPERFAMILY SSF88697 250 310 4.12E-15 T 22-04-2016 IPR015947 PUA-like domain VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 Gene3D G3DSA:2.30.130.10 249 312 7.4E-27 T 22-04-2016 IPR015947 PUA-like domain VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 SUPERFAMILY SSF55120 9 247 2.5E-84 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.933 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 PANTHER PTHR13767:SF2 1 308 1.8E-131 T 22-04-2016 VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 PANTHER PTHR13767 1 308 1.8E-131 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 9.7E-25 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 6.9E-87 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP2454 c275d3b76eeb4dc188a01ad4ab459532 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 4.7E-20 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VP1187 f1d1ef3c333d13096f45187c008ae371 310 PANTHER PTHR11061:SF34 1 308 5.5E-87 T 22-04-2016 VP1187 f1d1ef3c333d13096f45187c008ae371 310 SUPERFAMILY SSF53335 9 287 3.22E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1187 f1d1ef3c333d13096f45187c008ae371 310 PANTHER PTHR11061 1 308 5.5E-87 T 22-04-2016 VP1187 f1d1ef3c333d13096f45187c008ae371 310 Gene3D G3DSA:3.40.50.150 44 309 1.6E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1187 f1d1ef3c333d13096f45187c008ae371 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 7.0E-178 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VP1986 684d433d52d7ef42bb54f792766c3fb3 344 Gene3D G3DSA:3.40.50.1100 79 174 1.6E-8 T 22-04-2016 VP1986 684d433d52d7ef42bb54f792766c3fb3 344 SUPERFAMILY SSF53686 55 341 1.08E-56 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP1986 684d433d52d7ef42bb54f792766c3fb3 344 Gene3D G3DSA:3.40.50.1100 175 339 1.5E-15 T 22-04-2016 VP1986 684d433d52d7ef42bb54f792766c3fb3 344 PIRSF PIRSF006278 44 342 5.4E-24 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VP2159 9854fe14fdc196c61543ce320b6044dd 678 SMART SM00283 417 678 1.5E-66 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP2159 9854fe14fdc196c61543ce320b6044dd 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 485 677 6.8E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VP2159 9854fe14fdc196c61543ce320b6044dd 678 SUPERFAMILY SSF103190 115 212 9.42E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VP2159 9854fe14fdc196c61543ce320b6044dd 678 SUPERFAMILY SSF58104 378 677 3.01E-63 T 22-04-2016 VP2159 9854fe14fdc196c61543ce320b6044dd 678 Gene3D G3DSA:3.30.450.20 172 323 9.8E-18 T 22-04-2016 VP2159 9854fe14fdc196c61543ce320b6044dd 678 Gene3D G3DSA:1.10.287.950 432 647 1.7E-51 T 22-04-2016 VP2159 9854fe14fdc196c61543ce320b6044dd 678 PANTHER PTHR32089 2 677 1.9E-116 T 22-04-2016 VP2159 9854fe14fdc196c61543ce320b6044dd 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 38 323 4.0E-68 T 22-04-2016 IPR033462 Cache 3/Cache 2 fusion domain VP2195 b0b79b4f732b53cba32e807170bf1fef 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 5.2E-155 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 Gene3D G3DSA:3.40.50.150 9 251 5.1E-105 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2195 b0b79b4f732b53cba32e807170bf1fef 672 Gene3D G3DSA:3.50.50.60 574 656 3.8E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 Gene3D G3DSA:3.50.50.60 395 480 3.8E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 Gene3D G3DSA:3.50.50.60 266 335 3.8E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 PANTHER PTHR13847 607 669 1.4E-145 T 22-04-2016 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 PANTHER PTHR13847 224 588 1.4E-145 T 22-04-2016 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 3.0E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 PANTHER PTHR13847:SF182 607 669 1.4E-145 T 22-04-2016 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 PANTHER PTHR13847:SF182 224 588 1.4E-145 T 22-04-2016 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 SUPERFAMILY SSF51905 266 481 7.12E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 SUPERFAMILY SSF51905 574 663 7.12E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.822 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 VP2195 b0b79b4f732b53cba32e807170bf1fef 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 1.3E-47 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 VP2215 bcea2f12e774e8395c2d7660cbd1735c 405 PANTHER PTHR30009 93 288 5.2E-22 T 22-04-2016 VP2215 bcea2f12e774e8395c2d7660cbd1735c 405 PANTHER PTHR30009:SF10 93 288 5.2E-22 T 22-04-2016 VP2215 bcea2f12e774e8395c2d7660cbd1735c 405 Gene3D G3DSA:1.25.40.10 204 287 3.0E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2215 bcea2f12e774e8395c2d7660cbd1735c 405 SUPERFAMILY SSF48452 161 265 1.3E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2215 bcea2f12e774e8395c2d7660cbd1735c 405 Pfam PF14559 Tetratricopeptide repeat 176 244 4.8E-8 T 22-04-2016 VP2215 bcea2f12e774e8395c2d7660cbd1735c 405 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 3.1E-31 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI VP2215 bcea2f12e774e8395c2d7660cbd1735c 405 Gene3D G3DSA:1.25.40.10 159 203 1.8E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2969 aa6e7239ca04484f2c2803f031946140 164 Gene3D G3DSA:3.90.190.10 12 162 3.7E-37 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VP2969 aa6e7239ca04484f2c2803f031946140 164 PANTHER PTHR23339:SF64 21 159 1.6E-24 T 22-04-2016 VP2969 aa6e7239ca04484f2c2803f031946140 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 19 128 1.2E-9 T 22-04-2016 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04660+3.1.3.16 VP2969 aa6e7239ca04484f2c2803f031946140 164 SUPERFAMILY SSF52799 13 161 2.04E-31 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VP2969 aa6e7239ca04484f2c2803f031946140 164 PANTHER PTHR23339 21 159 1.6E-24 T 22-04-2016 VP2969 aa6e7239ca04484f2c2803f031946140 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 VP2376 742a745c98f15b1921b630de5c6488ff 607 PANTHER PTHR10342 222 566 2.0E-107 T 22-04-2016 VP2376 742a745c98f15b1921b630de5c6488ff 607 PANTHER PTHR10342:SF235 222 566 2.0E-107 T 22-04-2016 VP2376 742a745c98f15b1921b630de5c6488ff 607 PIRSF PIRSF004950 1 606 1.8E-234 T 22-04-2016 IPR012159 Inner membrane protein YejM VP2376 742a745c98f15b1921b630de5c6488ff 607 SUPERFAMILY SSF53649 247 571 3.05E-59 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP2376 742a745c98f15b1921b630de5c6488ff 607 Pfam PF00884 Sulfatase 250 521 1.8E-32 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VP2376 742a745c98f15b1921b630de5c6488ff 607 Gene3D G3DSA:3.40.720.10 250 538 2.1E-37 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP2376 742a745c98f15b1921b630de5c6488ff 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 6.5E-50 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VP1616 9c8dbea4f86ec0ac3352f6a3f793dd05 350 PANTHER PTHR21225:SF6 1 348 6.5E-261 T 22-04-2016 VP1616 9c8dbea4f86ec0ac3352f6a3f793dd05 350 Pfam PF00793 DAHP synthetase I family 44 338 1.3E-98 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VP1616 9c8dbea4f86ec0ac3352f6a3f793dd05 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 2.7E-158 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VP1616 9c8dbea4f86ec0ac3352f6a3f793dd05 350 PANTHER PTHR21225 1 348 6.5E-261 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VP1616 9c8dbea4f86ec0ac3352f6a3f793dd05 350 SUPERFAMILY SSF51569 8 347 1.93E-130 T 22-04-2016 VP1616 9c8dbea4f86ec0ac3352f6a3f793dd05 350 Gene3D G3DSA:3.20.20.70 11 348 2.1E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1616 9c8dbea4f86ec0ac3352f6a3f793dd05 350 PIRSF PIRSF001361 1 350 1.8E-153 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VP2831 ae31bdc448c73792b5db819da1c363a5 154 Gene3D G3DSA:3.10.420.10 6 153 2.3E-60 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP2831 ae31bdc448c73792b5db819da1c363a5 154 PANTHER PTHR36918 1 151 1.9E-81 T 22-04-2016 VP2831 ae31bdc448c73792b5db819da1c363a5 154 SUPERFAMILY SSF54611 4 143 4.8E-52 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP2831 ae31bdc448c73792b5db819da1c363a5 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.171 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP2831 ae31bdc448c73792b5db819da1c363a5 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 1.2E-59 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP2831 ae31bdc448c73792b5db819da1c363a5 154 PANTHER PTHR36918:SF1 1 151 1.9E-81 T 22-04-2016 VP2831 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.5E-38 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP2831 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.5E-38 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP2831 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.5E-38 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP2831 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.5E-38 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP2831 ae31bdc448c73792b5db819da1c363a5 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.4E-55 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VP0368 fa235fb533624c7019f8bc543940f091 176 Gene3D G3DSA:1.20.120.330 3 171 1.7E-66 T 22-04-2016 VP0368 fa235fb533624c7019f8bc543940f091 176 Pfam PF05068 Mannitol repressor 7 170 5.4E-62 T 22-04-2016 IPR007761 Mannitol repressor VP0368 fa235fb533624c7019f8bc543940f091 176 PANTHER PTHR37941 1 176 5.2E-41 T 22-04-2016 VP0368 fa235fb533624c7019f8bc543940f091 176 SUPERFAMILY SSF158668 4 170 3.01E-58 T 22-04-2016 VP2156 4a4095cb9971688ec67ffa7e8b18fc73 147 Gene3D G3DSA:2.170.150.20 16 146 5.5E-62 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VP2156 4a4095cb9971688ec67ffa7e8b18fc73 147 Pfam PF01641 SelR domain 25 143 2.7E-54 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VP2156 4a4095cb9971688ec67ffa7e8b18fc73 147 SUPERFAMILY SSF51316 19 146 4.08E-59 T 22-04-2016 IPR011057 Mss4-like VP2156 4a4095cb9971688ec67ffa7e8b18fc73 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 21 145 1.2E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VP2156 4a4095cb9971688ec67ffa7e8b18fc73 147 PANTHER PTHR10173 17 147 2.5E-61 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VP2156 4a4095cb9971688ec67ffa7e8b18fc73 147 PANTHER PTHR10173:SF18 17 147 2.5E-61 T 22-04-2016 VP2156 4a4095cb9971688ec67ffa7e8b18fc73 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 22 145 37.616 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VP2672 70f431218be0d037238ebe9b0aabacbd 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 8.1E-52 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP2672 70f431218be0d037238ebe9b0aabacbd 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP2672 70f431218be0d037238ebe9b0aabacbd 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 7.6E-38 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP2672 70f431218be0d037238ebe9b0aabacbd 148 SUPERFAMILY SSF55804 1 145 3.92E-41 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VP2672 70f431218be0d037238ebe9b0aabacbd 148 PANTHER PTHR30505:SF6 1 145 5.0E-72 T 22-04-2016 VP2672 70f431218be0d037238ebe9b0aabacbd 148 PANTHER PTHR30505 1 145 5.0E-72 T 22-04-2016 VP2672 70f431218be0d037238ebe9b0aabacbd 148 Gene3D G3DSA:3.40.930.10 1 147 1.1E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP2550 b8d60124ca077d8108425db2a35a43cc 347 PANTHER PTHR22942 3 335 3.1E-206 T 22-04-2016 VP2550 b8d60124ca077d8108425db2a35a43cc 347 Gene3D G3DSA:3.30.250.10 268 326 3.7E-29 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VP2550 b8d60124ca077d8108425db2a35a43cc 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.2E-170 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 210 238 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 165 194 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 243 272 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 127 156 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 297 314 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 93 122 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 SUPERFAMILY SSF54752 269 325 2.09E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VP2550 b8d60124ca077d8108425db2a35a43cc 347 ProSitePatterns PS00321 recA signature. 213 221 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VP2550 b8d60124ca077d8108425db2a35a43cc 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 5.8E-143 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 Gene3D G3DSA:3.40.50.300 26 267 1.5E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2550 b8d60124ca077d8108425db2a35a43cc 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.595 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 SMART SM00382 57 228 4.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2550 b8d60124ca077d8108425db2a35a43cc 347 PANTHER PTHR22942:SF1 3 335 3.1E-206 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VP2550 b8d60124ca077d8108425db2a35a43cc 347 SUPERFAMILY SSF52540 4 266 4.02E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1499 0279888ecc2044d9bb5a41435978c264 232 SUPERFAMILY SSF161098 15 222 3.27E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1499 0279888ecc2044d9bb5a41435978c264 232 PANTHER PTHR30183 1 232 7.5E-106 T 22-04-2016 VP1499 0279888ecc2044d9bb5a41435978c264 232 Gene3D G3DSA:1.10.3720.10 18 227 7.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1499 0279888ecc2044d9bb5a41435978c264 232 PANTHER PTHR30183:SF4 1 232 7.5E-106 T 22-04-2016 VP1499 0279888ecc2044d9bb5a41435978c264 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 7.1E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2392 89ea31937053b2a93c15c729d0b9dc55 110 Gene3D G3DSA:2.40.50.140 2 109 9.8E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2392 89ea31937053b2a93c15c729d0b9dc55 110 PANTHER PTHR11586:SF19 1 110 3.2E-68 T 22-04-2016 VP2392 89ea31937053b2a93c15c729d0b9dc55 110 Pfam PF01588 Putative tRNA binding domain 14 107 7.5E-30 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VP2392 89ea31937053b2a93c15c729d0b9dc55 110 PANTHER PTHR11586 1 110 3.2E-68 T 22-04-2016 VP2392 89ea31937053b2a93c15c729d0b9dc55 110 SUPERFAMILY SSF50249 8 109 5.88E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2106 e41ffdab5abcbc9155b495e009572655 211 SMART SM00900 100 192 6.5E-34 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VP2106 e41ffdab5abcbc9155b495e009572655 211 PANTHER PTHR36118:SF1 1 211 7.3E-74 T 22-04-2016 VP2106 e41ffdab5abcbc9155b495e009572655 211 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 26.771 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VP2106 e41ffdab5abcbc9155b495e009572655 211 Pfam PF04205 FMN-binding domain 100 189 5.5E-20 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VP2106 e41ffdab5abcbc9155b495e009572655 211 PANTHER PTHR36118 1 211 7.3E-74 T 22-04-2016 VP2106 e41ffdab5abcbc9155b495e009572655 211 PIRSF PIRSF006091 1 205 1.0E-77 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VP2106 e41ffdab5abcbc9155b495e009572655 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 3.0E-64 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VP1781 681ddad403932222cf64871121dc471c 462 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 266 281 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP1781 681ddad403932222cf64871121dc471c 462 SUPERFAMILY SSF54368 31 123 4.58E-7 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP1781 681ddad403932222cf64871121dc471c 462 SMART SM01230 128 385 5.3E-82 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP1781 681ddad403932222cf64871121dc471c 462 PANTHER PTHR20852:SF7 21 459 3.8E-89 T 22-04-2016 VP1781 681ddad403932222cf64871121dc471c 462 Gene3D G3DSA:3.10.20.70 32 125 1.5E-6 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP1781 681ddad403932222cf64871121dc471c 462 PANTHER PTHR20852 21 459 3.8E-89 T 22-04-2016 VP1781 681ddad403932222cf64871121dc471c 462 Gene3D G3DSA:3.30.590.10 132 449 2.7E-80 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 VP1781 681ddad403932222cf64871121dc471c 462 SUPERFAMILY SSF55931 131 459 1.37E-86 T 22-04-2016 VP1781 681ddad403932222cf64871121dc471c 462 Pfam PF00120 Glutamine synthetase, catalytic domain 132 457 2.9E-84 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VP2577 747bb0e17edb8b24f33cb6c519ee93b1 212 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 144 195 1.2E-19 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal VP2577 747bb0e17edb8b24f33cb6c519ee93b1 212 PANTHER PTHR38104 1 206 1.9E-58 T 22-04-2016 VP2577 747bb0e17edb8b24f33cb6c519ee93b1 212 SUPERFAMILY SSF89069 8 71 2.75E-21 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VP2577 747bb0e17edb8b24f33cb6c519ee93b1 212 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 103 8.4E-35 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VP2577 747bb0e17edb8b24f33cb6c519ee93b1 212 PIRSF PIRSF016938 3 206 1.3E-34 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 VP0339 c48801377da161235d989ce654f46b6c 781 Gene3D G3DSA:2.60.450.10 50 205 1.1E-22 T 22-04-2016 VP0339 c48801377da161235d989ce654f46b6c 781 Pfam PF04453 Organic solvent tolerance protein 297 682 1.4E-112 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VP0339 c48801377da161235d989ce654f46b6c 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 753 20.809 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VP0339 c48801377da161235d989ce654f46b6c 781 PANTHER PTHR30189 53 781 7.9E-101 T 22-04-2016 VP0339 c48801377da161235d989ce654f46b6c 781 Pfam PF03968 OstA-like protein 58 189 2.8E-17 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VP0309 0c53c730c41101d3aed64d9f1047303b 115 SUPERFAMILY SSF110857 3 114 5.36E-33 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VP0309 0c53c730c41101d3aed64d9f1047303b 115 PANTHER PTHR12510 1 114 2.1E-46 T 22-04-2016 VP0309 0c53c730c41101d3aed64d9f1047303b 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.7E-25 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VP0309 0c53c730c41101d3aed64d9f1047303b 115 Gene3D G3DSA:3.10.490.10 1 114 2.2E-40 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VP0309 0c53c730c41101d3aed64d9f1047303b 115 PANTHER PTHR12510:SF6 1 114 2.1E-46 T 22-04-2016 VP0310 cf9854aa31f5fd9954994efbc537aad1 120 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 4.5E-19 T 22-04-2016 IPR021242 Protein of unknown function DUF2799 VP0049 2514348eb158f143e6f2f6ebf8f9d0a7 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 335 8.8E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0049 2514348eb158f143e6f2f6ebf8f9d0a7 342 SUPERFAMILY SSF161098 107 319 1.09E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0049 2514348eb158f143e6f2f6ebf8f9d0a7 342 PANTHER PTHR30465 4 337 1.6E-214 T 22-04-2016 VP0049 2514348eb158f143e6f2f6ebf8f9d0a7 342 PANTHER PTHR30465:SF47 4 337 1.6E-214 T 22-04-2016 VP0049 2514348eb158f143e6f2f6ebf8f9d0a7 342 Gene3D G3DSA:1.10.3720.10 105 330 4.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2947 f4e212a48a3842c9634d5a22956f670a 808 PIRSF PIRSF500064 2 808 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VP2947 f4e212a48a3842c9634d5a22956f670a 808 Pfam PF01553 Acyltransferase 289 424 2.0E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP2947 f4e212a48a3842c9634d5a22956f670a 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VP2947 f4e212a48a3842c9634d5a22956f670a 808 PIRSF PIRSF000437 19 808 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VP2947 f4e212a48a3842c9634d5a22956f670a 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.421 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VP2947 f4e212a48a3842c9634d5a22956f670a 808 SMART SM00563 300 427 1.2E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP2947 f4e212a48a3842c9634d5a22956f670a 808 SUPERFAMILY SSF69593 241 490 2.09E-25 T 22-04-2016 VP2947 f4e212a48a3842c9634d5a22956f670a 808 PANTHER PTHR12563 144 774 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VP2947 f4e212a48a3842c9634d5a22956f670a 808 PANTHER PTHR12563 1 118 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VP2947 f4e212a48a3842c9634d5a22956f670a 808 PANTHER PTHR12563:SF14 144 774 0.0 T 22-04-2016 VP2947 f4e212a48a3842c9634d5a22956f670a 808 PANTHER PTHR12563:SF14 1 118 0.0 T 22-04-2016 VPA1636 0c40259805558040ad555a864fc42956 182 SUPERFAMILY SSF141072 10 57 3.53E-5 T 22-04-2016 VP2788 0029b58fd4a9b140742949c4a01bdd85 639 SUPERFAMILY SSF52540 277 494 6.48E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2788 0029b58fd4a9b140742949c4a01bdd85 639 SUPERFAMILY SSF52540 2 92 1.39E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2788 0029b58fd4a9b140742949c4a01bdd85 639 PANTHER PTHR19211 1 557 0.0 T 22-04-2016 VP2788 0029b58fd4a9b140742949c4a01bdd85 639 Pfam PF12848 ABC transporter 217 294 2.9E-27 T 22-04-2016 IPR032781 ABC-transporter extension domain VP2788 0029b58fd4a9b140742949c4a01bdd85 639 Pfam PF00005 ABC transporter 328 459 3.3E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2788 0029b58fd4a9b140742949c4a01bdd85 639 Pfam PF00005 ABC transporter 17 178 5.7E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2788 0029b58fd4a9b140742949c4a01bdd85 639 SMART SM00382 26 223 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2788 0029b58fd4a9b140742949c4a01bdd85 639 SMART SM00382 337 503 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2788 0029b58fd4a9b140742949c4a01bdd85 639 PANTHER PTHR19211:SF49 1 557 0.0 T 22-04-2016 VP2788 0029b58fd4a9b140742949c4a01bdd85 639 SUPERFAMILY SSF52540 119 258 1.39E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2788 0029b58fd4a9b140742949c4a01bdd85 639 Gene3D G3DSA:3.40.50.300 1 264 1.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2788 0029b58fd4a9b140742949c4a01bdd85 639 Gene3D G3DSA:3.40.50.300 310 540 1.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2788 0029b58fd4a9b140742949c4a01bdd85 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2788 0029b58fd4a9b140742949c4a01bdd85 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1463 1980aef8b7fd4680c1619ac15ceafe92 374 SUPERFAMILY SSF53756 81 372 2.35E-21 T 22-04-2016 VP1463 1980aef8b7fd4680c1619ac15ceafe92 374 Pfam PF13692 Glycosyl transferases group 1 216 345 4.2E-7 T 22-04-2016 VP2547 8ad1e9d83da7a31c2500484af61d6e5c 395 PANTHER PTHR21499:SF27 1 390 4.9E-126 T 22-04-2016 VP2547 8ad1e9d83da7a31c2500484af61d6e5c 395 PANTHER PTHR21499 1 390 4.9E-126 T 22-04-2016 VP2547 8ad1e9d83da7a31c2500484af61d6e5c 395 Gene3D G3DSA:3.40.1160.10 4 245 1.1E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2547 8ad1e9d83da7a31c2500484af61d6e5c 395 SUPERFAMILY SSF53633 6 241 4.84E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2547 8ad1e9d83da7a31c2500484af61d6e5c 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2547 8ad1e9d83da7a31c2500484af61d6e5c 395 Pfam PF00696 Amino acid kinase family 5 231 3.7E-52 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VP2547 8ad1e9d83da7a31c2500484af61d6e5c 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 2.4E-76 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VP2920 7757fed13fa230a9ee3c6bd530074762 163 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 153 4.3E-55 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VP2920 7757fed13fa230a9ee3c6bd530074762 163 PIRSF PIRSF016548 3 163 3.0E-70 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VP2294 20b3b78ea5dcf787a301aeff183a25b8 251 SUPERFAMILY SSF53335 73 212 8.03E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2294 20b3b78ea5dcf787a301aeff183a25b8 251 Gene3D G3DSA:3.40.50.150 65 212 8.4E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2294 20b3b78ea5dcf787a301aeff183a25b8 251 Pfam PF08241 Methyltransferase domain 61 125 6.7E-9 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VP2294 20b3b78ea5dcf787a301aeff183a25b8 251 PANTHER PTHR10108 72 223 1.5E-75 T 22-04-2016 VP2294 20b3b78ea5dcf787a301aeff183a25b8 251 PANTHER PTHR10108:SF836 72 223 1.5E-75 T 22-04-2016 VP1306 668320865ac1f7e4618cd271f2f0d6ee 177 Gene3D G3DSA:3.40.50.300 3 176 8.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1306 668320865ac1f7e4618cd271f2f0d6ee 177 SUPERFAMILY SSF52540 4 176 2.93E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1306 668320865ac1f7e4618cd271f2f0d6ee 177 PANTHER PTHR34848 1 177 2.3E-65 T 22-04-2016 VP1306 668320865ac1f7e4618cd271f2f0d6ee 177 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 174 9.6E-59 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VP1306 668320865ac1f7e4618cd271f2f0d6ee 177 PIRSF PIRSF006135 1 177 1.0E-53 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VP0403 ce79bdd71c7243fc9a24b7c75f4fb4d7 111 Gene3D G3DSA:1.10.260.40 20 80 1.0E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0403 ce79bdd71c7243fc9a24b7c75f4fb4d7 111 SMART SM00530 27 82 1.9E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP0403 ce79bdd71c7243fc9a24b7c75f4fb4d7 111 SUPERFAMILY SSF47413 17 80 3.1E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0403 ce79bdd71c7243fc9a24b7c75f4fb4d7 111 Pfam PF01381 Helix-turn-helix 28 81 1.2E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP2328 70c5a1bffefba3033fde0d0f122953c0 147 PANTHER PTHR35146 1 147 9.9E-53 T 22-04-2016 VP2328 70c5a1bffefba3033fde0d0f122953c0 147 PANTHER PTHR35146:SF1 1 147 9.9E-53 T 22-04-2016 VP2328 70c5a1bffefba3033fde0d0f122953c0 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.4E-47 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 VP2328 70c5a1bffefba3033fde0d0f122953c0 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.757 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 VP2233 f9ceb44509f52cee5f5f6a49c3a6161c 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 213 2.8E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VP2233 f9ceb44509f52cee5f5f6a49c3a6161c 295 PIRSF PIRSF003092 6 287 7.2E-86 T 22-04-2016 IPR025501 ATP binding protein MinD VP2233 f9ceb44509f52cee5f5f6a49c3a6161c 295 PANTHER PTHR13696 1 274 1.1E-131 T 22-04-2016 VP2233 f9ceb44509f52cee5f5f6a49c3a6161c 295 PANTHER PTHR13696:SF3 1 274 1.1E-131 T 22-04-2016 VP2233 f9ceb44509f52cee5f5f6a49c3a6161c 295 Gene3D G3DSA:3.40.50.300 22 261 1.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2233 f9ceb44509f52cee5f5f6a49c3a6161c 295 SUPERFAMILY SSF52540 22 282 1.82E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0674 5e6efa547fc4e8e4043542a0321460eb 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 2.7E-235 T 22-04-2016 IPR010520 UPF0255 family VP0674 5e6efa547fc4e8e4043542a0321460eb 415 Gene3D G3DSA:3.40.50.1820 347 388 1.2E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0674 5e6efa547fc4e8e4043542a0321460eb 415 Gene3D G3DSA:3.40.50.1820 156 300 1.2E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0674 5e6efa547fc4e8e4043542a0321460eb 415 SUPERFAMILY SSF53474 47 411 2.13E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0674 5e6efa547fc4e8e4043542a0321460eb 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 55.555 T 22-04-2016 IPR010520 UPF0255 family VP0304 379823a116e7274555fdd24553044992 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 1.0E-75 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VP0304 379823a116e7274555fdd24553044992 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 8.1E-88 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VP0304 379823a116e7274555fdd24553044992 183 Gene3D G3DSA:3.40.30.10 114 176 3.5E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 191 223 330.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 280 312 42.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 147 178 0.25 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 107 138 0.013 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 322 353 0.0084 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 243 274 80.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 63 94 9.8E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 SUPERFAMILY SSF50998 31 375 5.65E-82 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.926 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 Pfam PF13360 PQQ-like domain 76 310 1.2E-51 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 Gene3D G3DSA:2.140.10.10 8 379 6.0E-73 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 PANTHER PTHR32303:SF8 1 365 1.0E-146 T 22-04-2016 VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 1.3E-143 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB VP0611 0b506d86d4c0e9db8425f5c07cf76e3a 386 PANTHER PTHR32303 1 365 1.0E-146 T 22-04-2016 VP2932 81ab77229f0416566e8238122726d69f 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 7.9E-31 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2932 81ab77229f0416566e8238122726d69f 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 6.4E-87 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2932 81ab77229f0416566e8238122726d69f 347 SUPERFAMILY SSF56194 207 341 2.09E-46 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2932 81ab77229f0416566e8238122726d69f 347 Gene3D G3DSA:3.30.465.10 76 233 1.8E-50 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VP2932 81ab77229f0416566e8238122726d69f 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.532 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2932 81ab77229f0416566e8238122726d69f 347 PANTHER PTHR21071:SF6 1 340 2.8E-157 T 22-04-2016 VP2932 81ab77229f0416566e8238122726d69f 347 PANTHER PTHR21071 1 340 2.8E-157 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2932 81ab77229f0416566e8238122726d69f 347 Pfam PF01565 FAD binding domain 23 144 2.3E-18 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VP2932 81ab77229f0416566e8238122726d69f 347 Gene3D G3DSA:3.90.78.10 234 340 7.4E-39 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VP2932 81ab77229f0416566e8238122726d69f 347 Gene3D G3DSA:3.30.43.10 8 71 6.1E-22 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VP2932 81ab77229f0416566e8238122726d69f 347 SUPERFAMILY SSF56176 8 198 1.85E-41 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VP0618 4c98a36d581fb6f58c2256dfbe24b6d3 506 PANTHER PTHR33451 6 504 6.7E-124 T 22-04-2016 VP0618 4c98a36d581fb6f58c2256dfbe24b6d3 506 PANTHER PTHR33451:SF7 6 504 6.7E-124 T 22-04-2016 VP0618 4c98a36d581fb6f58c2256dfbe24b6d3 506 Pfam PF03553 Na+/H+ antiporter family 161 470 1.2E-51 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VP1669 9a21eae008dbefd3e05266c55e9c1110 153 Pfam PF07321 Type III secretion protein YscO 2 149 8.2E-43 T 22-04-2016 IPR009929 Type III secretion sytem,YscO VP2837 f8d27142aa74d06966cb35a8c19a0dbe 124 Pfam PF04892 VanZ like family 36 109 1.1E-8 T 22-04-2016 IPR006976 VanZ-like VP0969 6974776d77cde45939c5ec184cea32bb 179 PANTHER PTHR35602 1 177 7.2E-125 T 22-04-2016 VP0969 6974776d77cde45939c5ec184cea32bb 179 PANTHER PTHR35602:SF2 1 177 7.2E-125 T 22-04-2016 VP0969 6974776d77cde45939c5ec184cea32bb 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.7E-68 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VP0969 6974776d77cde45939c5ec184cea32bb 179 SUPERFAMILY SSF53474 2 176 1.98E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0969 6974776d77cde45939c5ec184cea32bb 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.417 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 VP0633 0bd1d2eb8b2588b94d331f074ffd8eef 203 PANTHER PTHR30353 1 200 3.7E-35 T 22-04-2016 IPR032818 DedA family VP0633 0bd1d2eb8b2588b94d331f074ffd8eef 203 Pfam PF09335 SNARE associated Golgi protein 37 157 3.2E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein VP1378 6514d63a6b385965ceefed96d79c2e90 403 Gene3D G3DSA:1.10.3210.10 161 296 7.9E-18 T 22-04-2016 IPR006674 HD domain VP1378 6514d63a6b385965ceefed96d79c2e90 403 SMART SM00471 161 297 2.9E-9 T 22-04-2016 IPR003607 HD/PDEase domain VP1378 6514d63a6b385965ceefed96d79c2e90 403 SUPERFAMILY SSF109604 156 327 2.42E-32 T 22-04-2016 VP1378 6514d63a6b385965ceefed96d79c2e90 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 3.2E-18 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 VP1378 6514d63a6b385965ceefed96d79c2e90 403 Pfam PF01966 HD domain 166 287 1.0E-13 T 22-04-2016 IPR006674 HD domain VP2700 cfd33e4204147628206f22c8fb18f90d 407 PANTHER PTHR30012:SF4 2 405 1.8E-242 T 22-04-2016 VP2700 cfd33e4204147628206f22c8fb18f90d 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.4E-30 T 22-04-2016 IPR018076 Type II secretion system F domain VP2700 cfd33e4204147628206f22c8fb18f90d 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 9.3E-27 T 22-04-2016 IPR018076 Type II secretion system F domain VP2700 cfd33e4204147628206f22c8fb18f90d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.9E-9 T 22-04-2016 IPR003004 GspF/PilC family VP2700 cfd33e4204147628206f22c8fb18f90d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.9E-9 T 22-04-2016 IPR003004 GspF/PilC family VP2700 cfd33e4204147628206f22c8fb18f90d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.9E-9 T 22-04-2016 IPR003004 GspF/PilC family VP2700 cfd33e4204147628206f22c8fb18f90d 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.9E-9 T 22-04-2016 IPR003004 GspF/PilC family VP2700 cfd33e4204147628206f22c8fb18f90d 407 PANTHER PTHR30012 2 405 1.8E-242 T 22-04-2016 VP0166 cdfe43d8730cbde22b2af51101825eb7 453 PANTHER PTHR30625 17 446 2.8E-82 T 22-04-2016 VP0166 cdfe43d8730cbde22b2af51101825eb7 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.8E-28 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VP0166 cdfe43d8730cbde22b2af51101825eb7 453 PIRSF PIRSF037714 2 453 3.9E-170 T 22-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein VP0166 cdfe43d8730cbde22b2af51101825eb7 453 PANTHER PTHR30625:SF0 17 446 2.8E-82 T 22-04-2016 VP2937 20a1fd46276a1bbcc960d12ea84a42be 227 Gene3D G3DSA:3.90.1490.10 146 221 1.0E-14 T 22-04-2016 VP2937 20a1fd46276a1bbcc960d12ea84a42be 227 SUPERFAMILY SSF52402 4 222 5.18E-55 T 22-04-2016 VP2937 20a1fd46276a1bbcc960d12ea84a42be 227 Pfam PF01902 Diphthamide synthase 6 215 3.9E-24 T 22-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 VP2937 20a1fd46276a1bbcc960d12ea84a42be 227 Gene3D G3DSA:3.40.50.620 3 144 2.9E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP1684 a8208672d60ca1390a63cc941323ab38 166 Pfam PF05932 Tir chaperone protein (CesT) family 26 142 9.5E-6 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VP1684 a8208672d60ca1390a63cc941323ab38 166 Gene3D G3DSA:3.30.1460.10 23 148 3.7E-8 T 22-04-2016 VP1684 a8208672d60ca1390a63cc941323ab38 166 SUPERFAMILY SSF69635 22 148 5.23E-11 T 22-04-2016 VP3055 edccefceeb04f18d9724a8b70375b6b0 292 SUPERFAMILY SSF69593 52 284 3.01E-27 T 22-04-2016 VP3055 edccefceeb04f18d9724a8b70375b6b0 292 PANTHER PTHR10983:SF15 1 292 2.9E-138 T 22-04-2016 VP3055 edccefceeb04f18d9724a8b70375b6b0 292 SMART SM00563 85 227 2.7E-19 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP3055 edccefceeb04f18d9724a8b70375b6b0 292 PANTHER PTHR10983 1 292 2.9E-138 T 22-04-2016 VP3055 edccefceeb04f18d9724a8b70375b6b0 292 Pfam PF01553 Acyltransferase 72 226 1.0E-16 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP2059 81712478b8d8879e5386a2c10e9ceb6a 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 9.7E-17 T 22-04-2016 IPR003772 Protein of unknown function DUF177 VP2059 81712478b8d8879e5386a2c10e9ceb6a 174 PANTHER PTHR38099 2 174 2.8E-74 T 22-04-2016 VP0543 3bee836ec15c400cb8072ddeb605581f 308 Gene3D G3DSA:3.40.50.10490 11 256 1.5E-89 T 22-04-2016 VP0543 3bee836ec15c400cb8072ddeb605581f 308 PANTHER PTHR10088:SF5 1 305 5.6E-199 T 22-04-2016 VP0543 3bee836ec15c400cb8072ddeb605581f 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.111 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VP0543 3bee836ec15c400cb8072ddeb605581f 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VP0543 3bee836ec15c400cb8072ddeb605581f 308 PANTHER PTHR10088 1 305 5.6E-199 T 22-04-2016 VP0543 3bee836ec15c400cb8072ddeb605581f 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 5.2E-131 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VP0543 3bee836ec15c400cb8072ddeb605581f 308 Pfam PF13580 SIS domain 49 172 2.4E-10 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VP0543 3bee836ec15c400cb8072ddeb605581f 308 SUPERFAMILY SSF53697 12 256 2.07E-74 T 22-04-2016 VP1457 f6c0772f2643c720fd28ef000c5b418d 129 Pfam PF13671 AAA domain 6 106 1.3E-13 T 22-04-2016 VP1457 f6c0772f2643c720fd28ef000c5b418d 129 SUPERFAMILY SSF52540 5 105 1.75E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1457 f6c0772f2643c720fd28ef000c5b418d 129 PANTHER PTHR13308:SF5 5 89 8.3E-22 T 22-04-2016 IPR026567 NEDD4-binding protein 2-like 1 VP1457 f6c0772f2643c720fd28ef000c5b418d 129 PANTHER PTHR13308 5 89 8.3E-22 T 22-04-2016 VP1457 f6c0772f2643c720fd28ef000c5b418d 129 Gene3D G3DSA:3.40.50.300 5 127 6.6E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2698 576f2d56f7e593319fdbe284eab5916d 165 SUPERFAMILY SSF54523 7 49 3.69E-12 T 22-04-2016 VP2698 576f2d56f7e593319fdbe284eab5916d 165 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 9.3E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP2698 576f2d56f7e593319fdbe284eab5916d 165 PANTHER PTHR30093 1 60 1.6E-25 T 22-04-2016 VP2698 576f2d56f7e593319fdbe284eab5916d 165 Gene3D G3DSA:3.30.700.10 7 40 1.1E-4 T 22-04-2016 VP2698 576f2d56f7e593319fdbe284eab5916d 165 PANTHER PTHR30093:SF7 1 60 1.6E-25 T 22-04-2016 VP2698 576f2d56f7e593319fdbe284eab5916d 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP2698 576f2d56f7e593319fdbe284eab5916d 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 8.0E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPA1686 bfbd063a11abce4e5b6743c1f35e3ab6 208 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 43 63 5.7E-22 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPA1686 bfbd063a11abce4e5b6743c1f35e3ab6 208 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 127 146 5.7E-22 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPA1686 bfbd063a11abce4e5b6743c1f35e3ab6 208 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 161 176 5.7E-22 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPA1686 bfbd063a11abce4e5b6743c1f35e3ab6 208 PANTHER PTHR30332:SF5 5 206 2.3E-64 T 22-04-2016 VPA1686 bfbd063a11abce4e5b6743c1f35e3ab6 208 PANTHER PTHR30332 5 206 2.3E-64 T 22-04-2016 VPA1686 bfbd063a11abce4e5b6743c1f35e3ab6 208 Pfam PF00263 Bacterial type II and III secretion system protein 114 192 1.5E-9 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VPA1686 bfbd063a11abce4e5b6743c1f35e3ab6 208 Pfam PF03958 Bacterial type II/III secretion system short domain 4 40 5.8E-9 T 22-04-2016 IPR005644 NolW-like VP0816 74f970da2e39508d6aa712edfd9268d5 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 6.3E-23 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type VP0816 74f970da2e39508d6aa712edfd9268d5 181 SUPERFAMILY SSF56300 2 162 8.99E-38 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0816 74f970da2e39508d6aa712edfd9268d5 181 PANTHER PTHR11124 1 162 7.9E-57 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VP0816 74f970da2e39508d6aa712edfd9268d5 181 Gene3D G3DSA:3.60.21.10 2 164 4.3E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0816 74f970da2e39508d6aa712edfd9268d5 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 165 4.4E-28 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VP0816 74f970da2e39508d6aa712edfd9268d5 181 PANTHER PTHR11124:SF14 1 162 7.9E-57 T 22-04-2016 VP2224 fbed331714efcb2e5aa6e1c5604154f0 163 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 6.3E-23 T 22-04-2016 IPR021244 Protein of unknown function DUF2802 VP1195 7dbdf2646d4937048159cf201f36d7e9 569 Gene3D G3DSA:1.10.3720.10 3 278 7.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1195 7dbdf2646d4937048159cf201f36d7e9 569 Gene3D G3DSA:1.10.3720.10 302 545 1.4E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1195 7dbdf2646d4937048159cf201f36d7e9 569 SUPERFAMILY SSF161098 301 541 2.52E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1195 7dbdf2646d4937048159cf201f36d7e9 569 PANTHER PTHR30183 35 551 1.4E-173 T 22-04-2016 VP1195 7dbdf2646d4937048159cf201f36d7e9 569 PANTHER PTHR30183:SF6 35 551 1.4E-173 T 22-04-2016 VP1195 7dbdf2646d4937048159cf201f36d7e9 569 SUPERFAMILY SSF161098 5 276 8.24E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0195 930510ed19390810b22b04a070df4ae8 135 PANTHER PTHR34299 9 132 2.8E-38 T 22-04-2016 VP0195 930510ed19390810b22b04a070df4ae8 135 Pfam PF01219 Prokaryotic diacylglycerol kinase 28 129 1.7E-33 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VP0195 930510ed19390810b22b04a070df4ae8 135 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 82 93 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VP0195 930510ed19390810b22b04a070df4ae8 135 PANTHER PTHR34299:SF1 9 132 2.8E-38 T 22-04-2016 VP0195 930510ed19390810b22b04a070df4ae8 135 Gene3D G3DSA:1.10.3830.10 16 132 3.5E-44 T 22-04-2016 VP0806 a4bce960481d4047839580c219ee9267 284 Gene3D G3DSA:3.40.30.10 6 109 8.6E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0806 a4bce960481d4047839580c219ee9267 284 Pfam PF00085 Thioredoxin 6 109 1.4E-14 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 VP0806 a4bce960481d4047839580c219ee9267 284 Pfam PF14559 Tetratricopeptide repeat 124 190 8.8E-13 T 22-04-2016 VP0806 a4bce960481d4047839580c219ee9267 284 Gene3D G3DSA:1.25.40.10 110 196 6.8E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0806 a4bce960481d4047839580c219ee9267 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.7E-29 T 22-04-2016 VP0806 a4bce960481d4047839580c219ee9267 284 SUPERFAMILY SSF48452 115 246 4.81E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0806 a4bce960481d4047839580c219ee9267 284 Gene3D G3DSA:1.25.40.10 197 284 3.9E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0806 a4bce960481d4047839580c219ee9267 284 SUPERFAMILY SSF52833 3 113 3.01E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold VP0806 a4bce960481d4047839580c219ee9267 284 PANTHER PTHR10438 6 112 5.1E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VP0806 a4bce960481d4047839580c219ee9267 284 PANTHER PTHR10438 233 254 5.1E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VP0806 a4bce960481d4047839580c219ee9267 284 PANTHER PTHR10438:SF288 6 112 5.1E-39 T 22-04-2016 VP0806 a4bce960481d4047839580c219ee9267 284 PANTHER PTHR10438:SF288 233 254 5.1E-39 T 22-04-2016 VP1407 df8843b78323718ac4b5bbf007d7aabe 150 SMART SM00344 10 116 2.7E-25 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VP1407 df8843b78323718ac4b5bbf007d7aabe 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VP1407 df8843b78323718ac4b5bbf007d7aabe 150 PANTHER PTHR30154:SF12 2 148 1.1E-35 T 22-04-2016 VP1407 df8843b78323718ac4b5bbf007d7aabe 150 SUPERFAMILY SSF46785 10 66 1.06E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1407 df8843b78323718ac4b5bbf007d7aabe 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 2.0E-12 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VP1407 df8843b78323718ac4b5bbf007d7aabe 150 PANTHER PTHR30154 2 148 1.1E-35 T 22-04-2016 VP1407 df8843b78323718ac4b5bbf007d7aabe 150 Gene3D G3DSA:3.30.70.920 75 146 1.9E-14 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VP1407 df8843b78323718ac4b5bbf007d7aabe 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 2.8E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP1407 df8843b78323718ac4b5bbf007d7aabe 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 2.7E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP1407 df8843b78323718ac4b5bbf007d7aabe 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 2.7E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP1407 df8843b78323718ac4b5bbf007d7aabe 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 2.7E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VP1407 df8843b78323718ac4b5bbf007d7aabe 150 SUPERFAMILY SSF54909 75 149 6.44E-12 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP1407 df8843b78323718ac4b5bbf007d7aabe 150 Gene3D G3DSA:1.10.10.10 4 61 1.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2091 27674b33b39416673eecd4027fe2283a 557 Gene3D G3DSA:3.40.190.10 174 325 1.7E-56 T 22-04-2016 VP2091 27674b33b39416673eecd4027fe2283a 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 477 7.6E-95 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VP2091 27674b33b39416673eecd4027fe2283a 557 PIRSF PIRSF002741 4 557 2.4E-117 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VP2091 27674b33b39416673eecd4027fe2283a 557 SUPERFAMILY SSF53850 55 545 4.34E-149 T 22-04-2016 VP2091 27674b33b39416673eecd4027fe2283a 557 Gene3D G3DSA:3.10.105.10 326 526 5.9E-63 T 22-04-2016 VP2091 27674b33b39416673eecd4027fe2283a 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 103 124 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site VP2091 27674b33b39416673eecd4027fe2283a 557 PANTHER PTHR30290:SF23 51 555 7.4E-196 T 22-04-2016 VP2091 27674b33b39416673eecd4027fe2283a 557 PANTHER PTHR30290 51 555 7.4E-196 T 22-04-2016 VP2549 e56fab375e1e721503c58069f9eac722 155 Pfam PF02631 RecX family 34 150 9.8E-31 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VP2549 e56fab375e1e721503c58069f9eac722 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.898 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VP2549 e56fab375e1e721503c58069f9eac722 155 PANTHER PTHR33602 13 155 1.9E-37 T 22-04-2016 VP2549 e56fab375e1e721503c58069f9eac722 155 PANTHER PTHR33602:SF1 13 155 1.9E-37 T 22-04-2016 VP2549 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 58 100 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2549 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 104 155 2.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2549 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 13 57 3.4E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0912 ffe123549d96783d004e07c9b768f1a6 453 PIRSF PIRSF006066 1 447 1.2E-136 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VP0912 ffe123549d96783d004e07c9b768f1a6 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 7.1E-117 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VP0912 ffe123549d96783d004e07c9b768f1a6 453 PANTHER PTHR33362 1 451 8.5E-243 T 22-04-2016 VP0912 ffe123549d96783d004e07c9b768f1a6 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.5E-85 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VP0912 ffe123549d96783d004e07c9b768f1a6 453 PANTHER PTHR33362:SF6 1 451 8.5E-243 T 22-04-2016 VP2356 95b32fade125251c5bcfa73903b4295c 450 Pfam PF07690 Major Facilitator Superfamily 24 397 7.1E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP2356 95b32fade125251c5bcfa73903b4295c 450 SUPERFAMILY SSF103473 11 436 1.05E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP2356 95b32fade125251c5bcfa73903b4295c 450 PANTHER PTHR12778 20 436 5.1E-91 T 22-04-2016 VP2356 95b32fade125251c5bcfa73903b4295c 450 Gene3D G3DSA:1.20.1250.20 256 436 3.3E-15 T 22-04-2016 VP2356 95b32fade125251c5bcfa73903b4295c 450 Gene3D G3DSA:1.20.1250.20 18 224 3.4E-16 T 22-04-2016 VPA0137 8e6c59f5a6e2f340b43768f0d67869d0 42 PANTHER PTHR24423 1 42 1.0E-16 T 22-04-2016 VPA0137 8e6c59f5a6e2f340b43768f0d67869d0 42 SUPERFAMILY SSF47384 7 39 5.89E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPA0137 8e6c59f5a6e2f340b43768f0d67869d0 42 PANTHER PTHR24423:SF488 1 42 1.0E-16 T 22-04-2016 VPA0137 8e6c59f5a6e2f340b43768f0d67869d0 42 Pfam PF00512 His Kinase A (phospho-acceptor) domain 14 39 3.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPA0137 8e6c59f5a6e2f340b43768f0d67869d0 42 Gene3D G3DSA:1.10.287.130 6 39 1.1E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VP2637 8138e056ad05bda4c2a1655d094dafda 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 5.1E-24 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VP2637 8138e056ad05bda4c2a1655d094dafda 101 Gene3D G3DSA:3.40.50.270 1 101 6.5E-38 T 22-04-2016 VP2637 8138e056ad05bda4c2a1655d094dafda 101 SUPERFAMILY SSF52794 1 101 3.53E-36 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VP2637 8138e056ad05bda4c2a1655d094dafda 101 PANTHER PTHR34581 2 101 1.1E-49 T 22-04-2016 VP2637 8138e056ad05bda4c2a1655d094dafda 101 PANTHER PTHR34581:SF2 2 101 1.1E-49 T 22-04-2016 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 PANTHER PTHR19139:SF100 7 252 1.4E-87 T 22-04-2016 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 5.2E-68 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 Gene3D G3DSA:1.20.1080.10 5 253 6.2E-83 T 22-04-2016 IPR023271 Aquaporin-like VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 Pfam PF00230 Major intrinsic protein 6 252 5.4E-63 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 SUPERFAMILY SSF81338 9 254 2.75E-74 T 22-04-2016 IPR023271 Aquaporin-like VP2385 80b9c8aeffdd265e64f80b34a03d7766 284 PANTHER PTHR19139 7 252 1.4E-87 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VP1062 edba06ed5880074009f6847411c1a56f 251 Gene3D G3DSA:1.25.40.10 136 243 2.7E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1062 edba06ed5880074009f6847411c1a56f 251 SMART SM00028 171 204 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1062 edba06ed5880074009f6847411c1a56f 251 SMART SM00028 207 240 0.27 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1062 edba06ed5880074009f6847411c1a56f 251 Pfam PF13432 Tetratricopeptide repeat 145 196 7.4E-7 T 22-04-2016 VP1062 edba06ed5880074009f6847411c1a56f 251 PANTHER PTHR26312 145 251 4.0E-19 T 22-04-2016 VP1062 edba06ed5880074009f6847411c1a56f 251 Pfam PF16331 TolA binding protein trimerisation 42 114 4.5E-24 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 VP1062 edba06ed5880074009f6847411c1a56f 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 249 3.9E-39 T 22-04-2016 IPR014162 Tol-Pal system, YbgF VP1062 edba06ed5880074009f6847411c1a56f 251 PANTHER PTHR26312:SF74 145 251 4.0E-19 T 22-04-2016 VP1062 edba06ed5880074009f6847411c1a56f 251 Pfam PF13174 Tetratricopeptide repeat 208 240 8.5E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP1062 edba06ed5880074009f6847411c1a56f 251 SUPERFAMILY SSF48452 134 244 1.39E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0923 47e4d72b3d514937938797b8fefa00e8 204 SMART SM01144 1 193 1.3E-69 T 22-04-2016 IPR005636 DTW VP0923 47e4d72b3d514937938797b8fefa00e8 204 Pfam PF03942 DTW domain 3 188 7.9E-51 T 22-04-2016 IPR005636 DTW VP0923 47e4d72b3d514937938797b8fefa00e8 204 PANTHER PTHR21392 1 192 3.5E-51 T 22-04-2016 VP0349 be792dbab65d1b83c3a210e14ca6e299 348 Gene3D G3DSA:3.40.50.2000 216 302 6.1E-5 T 22-04-2016 VP0349 be792dbab65d1b83c3a210e14ca6e299 348 Pfam PF13528 Glycosyl transferase family 1 1 300 2.2E-36 T 22-04-2016 VP0349 be792dbab65d1b83c3a210e14ca6e299 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 3.6E-106 T 22-04-2016 IPR005262 Conserved hypothetical protein CHP00661 KEGG: 00540+2.4.-.- VP0349 be792dbab65d1b83c3a210e14ca6e299 348 SUPERFAMILY SSF53756 8 291 4.32E-12 T 22-04-2016 VP1462 843eddafd64dd1bd55e4f4068da8de75 477 PANTHER PTHR32309:SF13 16 294 5.1E-25 T 22-04-2016 VP1462 843eddafd64dd1bd55e4f4068da8de75 477 PANTHER PTHR32309:SF13 326 474 5.1E-25 T 22-04-2016 VP1462 843eddafd64dd1bd55e4f4068da8de75 477 PANTHER PTHR32309 16 294 5.1E-25 T 22-04-2016 VP1462 843eddafd64dd1bd55e4f4068da8de75 477 PANTHER PTHR32309 326 474 5.1E-25 T 22-04-2016 VP1462 843eddafd64dd1bd55e4f4068da8de75 477 Pfam PF02706 Chain length determinant protein 11 142 4.3E-6 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VP1267 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 118 140 5.0E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1267 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 148 163 5.0E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1267 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 163 179 5.0E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP1267 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 8.9E-7 T 22-04-2016 VP1267 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 8.9E-7 T 22-04-2016 VP1267 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 8.9E-7 T 22-04-2016 VP1267 8e016047ad19431bfdf668f825439073 222 Pfam PF13488 Glycine zipper 38 86 3.8E-11 T 22-04-2016 VP1267 8e016047ad19431bfdf668f825439073 222 PANTHER PTHR30128 24 222 6.5E-60 T 22-04-2016 VP1267 8e016047ad19431bfdf668f825439073 222 SUPERFAMILY SSF103088 106 221 4.71E-37 T 22-04-2016 IPR006665 OmpA-like domain VP1267 8e016047ad19431bfdf668f825439073 222 Gene3D G3DSA:3.30.1330.60 107 220 2.3E-38 T 22-04-2016 IPR006665 OmpA-like domain VP1267 8e016047ad19431bfdf668f825439073 222 Pfam PF00691 OmpA family 118 212 3.1E-23 T 22-04-2016 IPR006665 OmpA-like domain VP1208 1d7d5b295649aa26f59a9ca48e4be1d4 235 Pfam PF00583 Acetyltransferase (GNAT) family 148 223 1.6E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP1208 1d7d5b295649aa26f59a9ca48e4be1d4 235 Gene3D G3DSA:3.40.630.30 137 232 1.8E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1208 1d7d5b295649aa26f59a9ca48e4be1d4 235 SUPERFAMILY SSF55729 84 229 5.93E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0181 7a96f668ea82821d6fd904b8d669adcf 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 371 7.5E-76 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VP0181 7a96f668ea82821d6fd904b8d669adcf 399 PANTHER PTHR14359:SF20 2 399 4.1E-196 T 22-04-2016 VP0181 7a96f668ea82821d6fd904b8d669adcf 399 SUPERFAMILY SSF52507 1 182 3.92E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VP0181 7a96f668ea82821d6fd904b8d669adcf 399 Gene3D G3DSA:3.40.50.10300 186 398 6.3E-88 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VP0181 7a96f668ea82821d6fd904b8d669adcf 399 Pfam PF02441 Flavoprotein 7 135 3.5E-31 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VP0181 7a96f668ea82821d6fd904b8d669adcf 399 PANTHER PTHR14359 2 399 4.1E-196 T 22-04-2016 VP0181 7a96f668ea82821d6fd904b8d669adcf 399 SUPERFAMILY SSF102645 184 398 1.57E-78 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VP0181 7a96f668ea82821d6fd904b8d669adcf 399 Gene3D G3DSA:3.40.50.1950 2 185 9.6E-65 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VP0181 7a96f668ea82821d6fd904b8d669adcf 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 6.2E-152 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 PANTHER PTHR30173 57 189 1.1E-25 T 22-04-2016 VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 PANTHER PTHR30173 1 41 1.1E-25 T 22-04-2016 VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 6 187 4.8E-57 T 22-04-2016 IPR011517 RNA polymerase sigma-70 ECF-like VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 Pfam PF07638 ECF sigma factor 6 188 1.4E-29 T 22-04-2016 IPR011517 RNA polymerase sigma-70 ECF-like VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 SUPERFAMILY SSF88659 123 187 3.18E-6 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 2.3E-17 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 PANTHER PTHR30173:SF5 57 189 1.1E-25 T 22-04-2016 VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 PANTHER PTHR30173:SF5 1 41 1.1E-25 T 22-04-2016 VP0055 ce6750658b3c8bb4cf761c3dea4fbb47 190 Gene3D G3DSA:1.10.10.10 142 188 1.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1557 06a7964132c3d48db3d4dddbd03249fd 114 Pfam PF10734 Protein of unknown function (DUF2523) 36 110 1.8E-5 T 22-04-2016 IPR019670 Protein of unkown function DUF2523 VP2901 6ee91daf78f1b40cd31e9428c0328ac8 405 SUPERFAMILY SSF110849 106 197 6.8E-7 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VP2901 6ee91daf78f1b40cd31e9428c0328ac8 405 Gene3D G3DSA:3.90.1530.10 106 171 4.3E-4 T 22-04-2016 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.103 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 PIRSF PIRSF000151 1 416 7.7E-164 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 3.2E-165 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 Pfam PF00171 Aldehyde dehydrogenase family 7 280 8.1E-15 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 PANTHER PTHR11063:SF8 1 416 6.3E-175 T 22-04-2016 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 Gene3D G3DSA:3.40.605.10 374 413 2.3E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 Gene3D G3DSA:3.40.605.10 3 221 2.3E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 Gene3D G3DSA:3.40.309.10 224 373 1.8E-32 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 SUPERFAMILY SSF53720 3 408 5.24E-109 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP0677 754d99b4342b380a08d3c79ad93ed0ff 416 PANTHER PTHR11063 1 416 6.3E-175 T 22-04-2016 VP1071 a059f62209c59a9640925828b06b0aba 378 Pfam PF00589 Phage integrase family 187 357 5.0E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP1071 a059f62209c59a9640925828b06b0aba 378 SUPERFAMILY SSF56349 100 359 2.65E-37 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VP1071 a059f62209c59a9640925828b06b0aba 378 PANTHER PTHR30349 97 347 2.3E-19 T 22-04-2016 VP1071 a059f62209c59a9640925828b06b0aba 378 PANTHER PTHR30349:SF20 97 347 2.3E-19 T 22-04-2016 VP1071 a059f62209c59a9640925828b06b0aba 378 Gene3D G3DSA:1.10.443.10 185 359 1.1E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VP0187 9dd252b373fe1db28414843f90d70514 510 Pfam PF00884 Sulfatase 208 469 3.9E-25 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VP0187 9dd252b373fe1db28414843f90d70514 510 Gene3D G3DSA:3.40.720.10 203 471 2.8E-10 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VP0187 9dd252b373fe1db28414843f90d70514 510 SUPERFAMILY SSF53649 207 471 1.57E-15 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VP0187 9dd252b373fe1db28414843f90d70514 510 PANTHER PTHR30443 33 482 7.1E-84 T 22-04-2016 VP0187 9dd252b373fe1db28414843f90d70514 510 PANTHER PTHR30443:SF4 33 482 7.1E-84 T 22-04-2016 VP1690 88789edcf5d900616f28cb56a711804f 248 PANTHER PTHR30046:SF2 1 240 2.6E-105 T 22-04-2016 VP1690 88789edcf5d900616f28cb56a711804f 248 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 7 194 4.5E-70 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VP1690 88789edcf5d900616f28cb56a711804f 248 Pfam PF01514 Secretory protein of YscJ/FliF family 13 188 2.3E-23 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF VP1690 88789edcf5d900616f28cb56a711804f 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 5.9E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VP1690 88789edcf5d900616f28cb56a711804f 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 166 178 5.9E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VP1690 88789edcf5d900616f28cb56a711804f 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 5.9E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VP1690 88789edcf5d900616f28cb56a711804f 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 5.9E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VP1690 88789edcf5d900616f28cb56a711804f 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 5.9E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VP1690 88789edcf5d900616f28cb56a711804f 248 PANTHER PTHR30046 1 240 2.6E-105 T 22-04-2016 VP1531 1e993d5d55418ae0392cf1cff35e625e 278 PANTHER PTHR40572 6 278 5.9E-63 T 22-04-2016 VP1531 1e993d5d55418ae0392cf1cff35e625e 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 136 273 4.8E-18 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VP2277 8701b8b3a43de1d7a4618143086fe0b7 81 Pfam PF01206 Sulfurtransferase TusA 6 75 1.7E-8 T 22-04-2016 IPR001455 TusA-like domain VP2277 8701b8b3a43de1d7a4618143086fe0b7 81 SUPERFAMILY SSF64307 4 72 4.06E-7 T 22-04-2016 IPR001455 TusA-like domain VP2277 8701b8b3a43de1d7a4618143086fe0b7 81 Gene3D G3DSA:3.30.110.40 4 75 6.8E-8 T 22-04-2016 IPR001455 TusA-like domain VP0683 350d914ac001488152d8411f74f699e9 155 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 23.044 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VP0683 350d914ac001488152d8411f74f699e9 155 Pfam PF01029 NusB family 11 149 1.9E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VP0683 350d914ac001488152d8411f74f699e9 155 PANTHER PTHR11078 5 154 1.1E-46 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VP0683 350d914ac001488152d8411f74f699e9 155 SUPERFAMILY SSF48013 7 153 3.79E-39 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VP0683 350d914ac001488152d8411f74f699e9 155 Gene3D G3DSA:1.10.940.10 6 154 3.8E-43 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VP0683 350d914ac001488152d8411f74f699e9 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 5.4E-43 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VP0206 08c1c5bdfee6d19303ab8582855f62bb 271 Pfam PF00795 Carbon-nitrogen hydrolase 2 227 1.1E-34 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0206 08c1c5bdfee6d19303ab8582855f62bb 271 SUPERFAMILY SSF56317 1 257 1.07E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0206 08c1c5bdfee6d19303ab8582855f62bb 271 Gene3D G3DSA:3.60.110.10 1 264 8.4E-56 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP0206 08c1c5bdfee6d19303ab8582855f62bb 271 PANTHER PTHR23088 1 267 3.1E-50 T 22-04-2016 VP0206 08c1c5bdfee6d19303ab8582855f62bb 271 PANTHER PTHR23088:SF27 1 267 3.1E-50 T 22-04-2016 VPA0435 6df5a66d98b3a3c37e0135d7ce46142f 319 PANTHER PTHR30621 1 319 6.8E-135 T 22-04-2016 VPA0435 6df5a66d98b3a3c37e0135d7ce46142f 319 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 27 278 4.9E-99 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VPA0435 6df5a66d98b3a3c37e0135d7ce46142f 319 Gene3D G3DSA:3.30.460.10 113 286 1.4E-59 T 22-04-2016 VPA0435 6df5a66d98b3a3c37e0135d7ce46142f 319 SUPERFAMILY SSF81301 1 289 8.17E-89 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VP2111 789d8f5f5cf96761e6245e662a686683 293 Gene3D G3DSA:3.30.1330.60 185 288 3.6E-26 T 22-04-2016 IPR006665 OmpA-like domain VP2111 789d8f5f5cf96761e6245e662a686683 293 PANTHER PTHR30128:SF10 26 288 2.3E-75 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PANTHER PTHR30128 26 288 2.3E-75 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.1E-174 T 22-04-2016 VP2111 789d8f5f5cf96761e6245e662a686683 293 Pfam PF00691 OmpA family 187 282 3.1E-19 T 22-04-2016 IPR006665 OmpA-like domain VP2111 789d8f5f5cf96761e6245e662a686683 293 SUPERFAMILY SSF103088 158 287 1.16E-25 T 22-04-2016 IPR006665 OmpA-like domain VP0558 a43df60f994572fbe48595a9551e420b 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 3.6E-80 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD VP0558 a43df60f994572fbe48595a9551e420b 242 PANTHER PTHR37423 1 240 6.5E-108 T 22-04-2016 VP0558 a43df60f994572fbe48595a9551e420b 242 Gene3D G3DSA:1.25.40.10 32 182 6.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0558 a43df60f994572fbe48595a9551e420b 242 SUPERFAMILY SSF48452 30 119 6.07E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0558 a43df60f994572fbe48595a9551e420b 242 Pfam PF13525 Outer membrane lipoprotein 26 232 7.0E-79 T 22-04-2016 VP0558 a43df60f994572fbe48595a9551e420b 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 45.85 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD VP1048 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VP1048 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VP1048 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VP1048 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VP1048 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VP1048 2c0382581621e507e023296c10ab5b42 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 3.2E-75 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VP1048 2c0382581621e507e023296c10ab5b42 173 PANTHER PTHR30194 1 169 6.7E-72 T 22-04-2016 VP1048 2c0382581621e507e023296c10ab5b42 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.719 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VP1048 2c0382581621e507e023296c10ab5b42 173 Gene3D G3DSA:3.30.420.10 3 156 2.4E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1048 2c0382581621e507e023296c10ab5b42 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.1E-62 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VP1048 2c0382581621e507e023296c10ab5b42 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VP1048 2c0382581621e507e023296c10ab5b42 173 SUPERFAMILY SSF53098 3 156 5.31E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1456 83da781119d11651f2a04e43473f9480 562 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 110 557 3.3E-134 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VP1456 83da781119d11651f2a04e43473f9480 562 PANTHER PTHR30047 36 557 7.6E-213 T 22-04-2016 VP1456 83da781119d11651f2a04e43473f9480 562 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 69 556 3.4E-169 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VP1456 83da781119d11651f2a04e43473f9480 562 PANTHER PTHR30047:SF2 36 557 7.6E-213 T 22-04-2016 VP1456 83da781119d11651f2a04e43473f9480 562 ProSitePatterns PS01303 BCCT family of transporters signature. 372 381 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 VP1321 1d4a1c7cbcbba20df09655753d6c8ef7 348 PANTHER PTHR10366 34 348 1.7E-54 T 22-04-2016 VP1321 1d4a1c7cbcbba20df09655753d6c8ef7 348 Gene3D G3DSA:3.40.50.720 30 216 1.7E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1321 1d4a1c7cbcbba20df09655753d6c8ef7 348 Gene3D G3DSA:3.90.25.10 217 347 1.4E-23 T 22-04-2016 VP1321 1d4a1c7cbcbba20df09655753d6c8ef7 348 Pfam PF01370 NAD dependent epimerase/dehydratase family 35 277 3.3E-38 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VP1321 1d4a1c7cbcbba20df09655753d6c8ef7 348 SUPERFAMILY SSF51735 27 347 5.96E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1770 6b92c3ebe0157d24f1021226b2f76445 317 SUPERFAMILY SSF64182 12 314 7.19E-55 T 22-04-2016 VP1770 6b92c3ebe0157d24f1021226b2f76445 317 PANTHER PTHR12112 12 317 4.7E-59 T 22-04-2016 VP1770 6b92c3ebe0157d24f1021226b2f76445 317 Pfam PF02833 DHHA2 domain 189 313 7.9E-21 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VP1770 6b92c3ebe0157d24f1021226b2f76445 317 Pfam PF01368 DHH family 16 148 5.4E-12 T 22-04-2016 IPR001667 DDH domain VP1770 6b92c3ebe0157d24f1021226b2f76445 317 PANTHER PTHR12112:SF17 12 317 4.7E-59 T 22-04-2016 VP1770 6b92c3ebe0157d24f1021226b2f76445 317 SMART SM01131 187 314 2.0E-41 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VP1770 6b92c3ebe0157d24f1021226b2f76445 317 Gene3D G3DSA:3.90.1640.10 12 191 8.4E-36 T 22-04-2016 VP1917 026f9bab54c83a8ceab4d552b94334fd 360 Gene3D G3DSA:2.130.10.10 59 230 7.1E-6 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VP1917 026f9bab54c83a8ceab4d552b94334fd 360 Gene3D G3DSA:2.130.10.10 283 307 7.1E-6 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VP1917 026f9bab54c83a8ceab4d552b94334fd 360 SUPERFAMILY SSF50969 61 314 1.26E-9 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VP1917 026f9bab54c83a8ceab4d552b94334fd 360 PIRSF PIRSF028101 4 360 4.4E-169 T 22-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VP1917 026f9bab54c83a8ceab4d552b94334fd 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 1.3E-113 T 22-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VP1599 4acde5eaa3f49584d4c16f21ba752933 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 36.039 T 22-04-2016 IPR009809 Cell division protein ZapC VP1599 4acde5eaa3f49584d4c16f21ba752933 180 Pfam PF07126 Cell-division protein ZapC 1 168 9.0E-66 T 22-04-2016 IPR009809 Cell division protein ZapC VP1599 4acde5eaa3f49584d4c16f21ba752933 180 PIRSF PIRSF010252 1 178 1.5E-72 T 22-04-2016 IPR009809 Cell division protein ZapC VP1794 56624fcaf4cf919065e9590c869afe1b 181 SUPERFAMILY SSF55729 40 177 2.06E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1794 56624fcaf4cf919065e9590c869afe1b 181 Pfam PF13420 Acetyltransferase (GNAT) domain 49 163 8.7E-11 T 22-04-2016 VP1794 56624fcaf4cf919065e9590c869afe1b 181 PANTHER PTHR23091 49 176 1.0E-15 T 22-04-2016 VP1794 56624fcaf4cf919065e9590c869afe1b 181 PANTHER PTHR23091 1 27 1.0E-15 T 22-04-2016 VP1794 56624fcaf4cf919065e9590c869afe1b 181 Gene3D G3DSA:3.40.630.30 1 174 8.4E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1673 0b897fec26ebee20487f960785fc3aac 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.6E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP1673 0b897fec26ebee20487f960785fc3aac 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.8E-31 T 22-04-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 VP1673 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.7E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP1673 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.7E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP1673 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.7E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP1673 0b897fec26ebee20487f960785fc3aac 88 PANTHER PTHR34040 2 88 7.5E-37 T 22-04-2016 VP1673 0b897fec26ebee20487f960785fc3aac 88 PIRSF PIRSF004669 1 88 4.4E-26 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VP1673 0b897fec26ebee20487f960785fc3aac 88 PANTHER PTHR34040:SF3 2 88 7.5E-37 T 22-04-2016 VP2821 ece949a7466773d6cf19313cea09add0 154 Gene3D G3DSA:3.40.50.300 4 150 3.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2821 ece949a7466773d6cf19313cea09add0 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 9.9E-44 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VP2821 ece949a7466773d6cf19313cea09add0 154 PANTHER PTHR33540 1 152 1.6E-55 T 22-04-2016 VP2821 ece949a7466773d6cf19313cea09add0 154 PANTHER PTHR33540:SF2 1 152 1.6E-55 T 22-04-2016 VP2821 ece949a7466773d6cf19313cea09add0 154 SUPERFAMILY SSF52540 27 151 5.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2821 ece949a7466773d6cf19313cea09add0 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 2.8E-53 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VP0279 e8b2fa34d117e41896678b4dde01c2be 118 PIRSF PIRSF002134 1 118 3.4E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0279 e8b2fa34d117e41896678b4dde01c2be 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.813 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0279 e8b2fa34d117e41896678b4dde01c2be 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0279 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:1.10.8.50 1 71 2.1E-28 T 22-04-2016 VP0279 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:4.10.910.10 72 118 3.5E-27 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal VP0279 e8b2fa34d117e41896678b4dde01c2be 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 VP0279 e8b2fa34d117e41896678b4dde01c2be 118 PANTHER PTHR10871 1 118 3.2E-70 T 22-04-2016 VP0279 e8b2fa34d117e41896678b4dde01c2be 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.3E-32 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0279 e8b2fa34d117e41896678b4dde01c2be 118 SUPERFAMILY SSF46946 2 114 4.42E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VP2645 7bcd2c123fb64f097f7200c98e9847ee 149 SUPERFAMILY SSF102400 1 145 4.97E-42 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VP2645 7bcd2c123fb64f097f7200c98e9847ee 149 Gene3D G3DSA:3.40.50.10110 1 146 3.8E-45 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VP2645 7bcd2c123fb64f097f7200c98e9847ee 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 5.7E-33 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VP2645 7bcd2c123fb64f097f7200c98e9847ee 149 PANTHER PTHR38767 2 149 1.4E-56 T 22-04-2016 VP1947 9bb1f8e4dc35100915f1f6b5570eb6b3 255 SUPERFAMILY SSF81301 6 64 3.72E-7 T 22-04-2016 VP1947 9bb1f8e4dc35100915f1f6b5570eb6b3 255 Gene3D G3DSA:3.30.460.10 20 126 2.6E-11 T 22-04-2016 VP1007 e4205e0ce29b11c49498493a38b34d8c 691 Gene3D G3DSA:3.40.50.300 212 253 1.5E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 Gene3D G3DSA:3.40.50.300 34 131 1.5E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 SMART SM00491 535 671 7.3E-28 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VP1007 e4205e0ce29b11c49498493a38b34d8c 691 Gene3D G3DSA:3.40.50.300 507 666 4.7E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 SUPERFAMILY SSF52540 207 263 4.36E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 SUPERFAMILY SSF52540 630 666 4.36E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 SUPERFAMILY SSF52540 16 123 4.36E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 PANTHER PTHR11472:SF32 1 687 1.2E-270 T 22-04-2016 VP1007 e4205e0ce29b11c49498493a38b34d8c 691 SUPERFAMILY SSF52540 507 610 3.07E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 SUPERFAMILY SSF52540 243 265 3.07E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 SUPERFAMILY SSF52540 641 666 3.07E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1007 e4205e0ce29b11c49498493a38b34d8c 691 Pfam PF13307 Helicase C-terminal domain 526 684 2.2E-36 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VP1007 e4205e0ce29b11c49498493a38b34d8c 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 254 6.1E-5 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VP1007 e4205e0ce29b11c49498493a38b34d8c 691 PANTHER PTHR11472 1 687 1.2E-270 T 22-04-2016 VP2284 78938dc7cb4dcdc48ed3b1a0c425f833 208 SUPERFAMILY SSF53271 3 206 3.28E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2284 78938dc7cb4dcdc48ed3b1a0c425f833 208 PANTHER PTHR10285 1 197 2.3E-102 T 22-04-2016 VP2284 78938dc7cb4dcdc48ed3b1a0c425f833 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 2.9E-92 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VP2284 78938dc7cb4dcdc48ed3b1a0c425f833 208 Gene3D G3DSA:3.40.50.2020 2 208 6.5E-76 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2284 78938dc7cb4dcdc48ed3b1a0c425f833 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.2E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP2284 78938dc7cb4dcdc48ed3b1a0c425f833 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.65 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VP2960 dd5aa7b88dcaad9360c049de71b017bb 74 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 74 1.7E-25 T 22-04-2016 IPR019620 Putative metal-binding protein VP2960 dd5aa7b88dcaad9360c049de71b017bb 74 Pfam PF10678 Protein of unknown function (DUF2492) 4 73 2.7E-24 T 22-04-2016 IPR019620 Putative metal-binding protein VP2362 8e647ec244ec8a1550cbd36afbb6efd4 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 6.7E-6 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VP2362 8e647ec244ec8a1550cbd36afbb6efd4 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 6.7E-6 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VP2362 8e647ec244ec8a1550cbd36afbb6efd4 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 172 195 6.7E-6 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VP2362 8e647ec244ec8a1550cbd36afbb6efd4 266 Gene3D G3DSA:2.40.230.20 23 266 6.3E-100 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VP2362 8e647ec244ec8a1550cbd36afbb6efd4 266 SUPERFAMILY SSF111364 30 266 6.54E-83 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VP2362 8e647ec244ec8a1550cbd36afbb6efd4 266 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 266 6.4E-100 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VP1861 83271fab9f8af8fabce6c0412b3353d2 175 Gene3D G3DSA:3.40.630.30 18 160 1.9E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1861 83271fab9f8af8fabce6c0412b3353d2 175 PANTHER PTHR23091 21 163 2.3E-15 T 22-04-2016 VP1861 83271fab9f8af8fabce6c0412b3353d2 175 SUPERFAMILY SSF55729 41 162 2.19E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1861 83271fab9f8af8fabce6c0412b3353d2 175 Pfam PF00583 Acetyltransferase (GNAT) family 78 158 1.2E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2740 0434b8f5a05bcdaa7fd0ca134c8e4546 129 PANTHER PTHR21011 1 126 1.2E-41 T 22-04-2016 VP2740 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Pfam PF01250 Ribosomal protein S6 3 91 1.2E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP2740 0434b8f5a05bcdaa7fd0ca134c8e4546 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.9E-39 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP2740 0434b8f5a05bcdaa7fd0ca134c8e4546 129 SUPERFAMILY SSF54995 1 103 2.09E-38 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP2740 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.163 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP2740 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Gene3D G3DSA:3.30.70.60 1 103 1.6E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VP2740 0434b8f5a05bcdaa7fd0ca134c8e4546 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VP2740 0434b8f5a05bcdaa7fd0ca134c8e4546 129 PANTHER PTHR21011:SF1 1 126 1.2E-41 T 22-04-2016 VP2862 1d886d8bfeaab0f452750d55a3e4d41c 172 PANTHER PTHR35335 1 167 6.3E-44 T 22-04-2016 VP2862 1d886d8bfeaab0f452750d55a3e4d41c 172 PANTHER PTHR35335:SF1 1 167 6.3E-44 T 22-04-2016 VP2862 1d886d8bfeaab0f452750d55a3e4d41c 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.9E-34 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VP0859 a3ef4e86051bd5a07f0085ab1a403912 76 Gene3D G3DSA:1.10.10.10 5 60 3.6E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0859 a3ef4e86051bd5a07f0085ab1a403912 76 SUPERFAMILY SSF46785 1 53 4.04E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0859 a3ef4e86051bd5a07f0085ab1a403912 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 8.4E-13 T 22-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC VP2290 be3789db15d7dff0d3de030a5fc5ddd2 591 Pfam PF01740 STAS domain 451 543 2.5E-16 T 22-04-2016 IPR002645 STAS domain VP2290 be3789db15d7dff0d3de030a5fc5ddd2 591 Gene3D G3DSA:3.30.750.24 450 540 2.1E-12 T 22-04-2016 IPR002645 STAS domain VP2290 be3789db15d7dff0d3de030a5fc5ddd2 591 PANTHER PTHR11814 6 539 2.2E-146 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VP2290 be3789db15d7dff0d3de030a5fc5ddd2 591 Pfam PF00916 Sulfate permease family 28 391 1.9E-81 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VP2290 be3789db15d7dff0d3de030a5fc5ddd2 591 SUPERFAMILY SSF52091 450 540 2.55E-13 T 22-04-2016 IPR002645 STAS domain VP1326 191122bd0960632b36bf51a1b12e8a82 528 PANTHER PTHR32060:SF0 357 406 3.7E-19 T 22-04-2016 VP1326 191122bd0960632b36bf51a1b12e8a82 528 PANTHER PTHR32060:SF0 139 335 3.7E-19 T 22-04-2016 VP1326 191122bd0960632b36bf51a1b12e8a82 528 SMART SM00245 231 449 0.0041 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VP1326 191122bd0960632b36bf51a1b12e8a82 528 Pfam PF03572 Peptidase family S41 260 407 1.0E-22 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VP1326 191122bd0960632b36bf51a1b12e8a82 528 Gene3D G3DSA:2.30.42.10 150 206 1.0E-4 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP1326 191122bd0960632b36bf51a1b12e8a82 528 PANTHER PTHR32060 357 406 3.7E-19 T 22-04-2016 VP1326 191122bd0960632b36bf51a1b12e8a82 528 PANTHER PTHR32060 139 335 3.7E-19 T 22-04-2016 VP1326 191122bd0960632b36bf51a1b12e8a82 528 SUPERFAMILY SSF50156 147 209 1.46E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VP1326 191122bd0960632b36bf51a1b12e8a82 528 SUPERFAMILY SSF52096 254 451 2.98E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP1326 191122bd0960632b36bf51a1b12e8a82 528 SUPERFAMILY SSF52096 126 164 2.98E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP1326 191122bd0960632b36bf51a1b12e8a82 528 Gene3D G3DSA:3.90.226.10 231 488 2.9E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP1346 d682c007b667d5dc46d803fd440eecc5 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 1.0E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1346 d682c007b667d5dc46d803fd440eecc5 306 PANTHER PTHR30465:SF74 1 306 3.9E-125 T 22-04-2016 VP1346 d682c007b667d5dc46d803fd440eecc5 306 Gene3D G3DSA:1.10.3720.10 87 302 1.5E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1346 d682c007b667d5dc46d803fd440eecc5 306 PANTHER PTHR30465 1 306 3.9E-125 T 22-04-2016 VP1346 d682c007b667d5dc46d803fd440eecc5 306 SUPERFAMILY SSF161098 91 290 2.88E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1686 77d2432c291c2723278ab6f42b3e76b5 387 SUPERFAMILY SSF140931 264 372 1.57E-6 T 22-04-2016 IPR003812 Fido domain VP1686 77d2432c291c2723278ab6f42b3e76b5 387 Pfam PF02661 Fic/DOC family 278 362 5.4E-5 T 22-04-2016 IPR003812 Fido domain VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 PANTHER PTHR15184:SF48 1 434 1.4E-263 T 22-04-2016 VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 2.3E-78 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 Gene3D G3DSA:3.40.50.300 96 360 3.7E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 1.5E-9 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 SMART SM00382 161 342 6.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 437 1.7E-200 T 22-04-2016 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 437 4.0E-175 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 PANTHER PTHR15184 1 434 1.4E-263 T 22-04-2016 VP1668 4ccb64217d253a8450ce1e908d62f4ac 440 SUPERFAMILY SSF52540 95 364 9.61E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0302 13cd17925761979f48e2e1d3fb9a64bf 209 Pfam PF10986 Protein of unknown function (DUF2796) 29 204 4.6E-52 T 22-04-2016 IPR021253 Protein of unknown function DUF2796 VP1451 effb6aab19effbc30ea060ed05ef77d7 165 Gene3D G3DSA:3.30.70.20 83 117 3.0E-7 T 22-04-2016 VP1451 effb6aab19effbc30ea060ed05ef77d7 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1451 effb6aab19effbc30ea060ed05ef77d7 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VP1451 effb6aab19effbc30ea060ed05ef77d7 165 Gene3D G3DSA:3.30.70.20 118 162 9.9E-13 T 22-04-2016 VP1451 effb6aab19effbc30ea060ed05ef77d7 165 SUPERFAMILY SSF54862 41 162 1.5E-21 T 22-04-2016 VP1451 effb6aab19effbc30ea060ed05ef77d7 165 Gene3D G3DSA:3.30.70.20 45 82 3.2E-12 T 22-04-2016 VP1451 effb6aab19effbc30ea060ed05ef77d7 165 Pfam PF12838 4Fe-4S dicluster domain 117 156 4.9E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP1451 effb6aab19effbc30ea060ed05ef77d7 165 Pfam PF12838 4Fe-4S dicluster domain 47 90 1.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VP2761 fc247a0be3fc2c3852d3723cb9858014 877 SUPERFAMILY SSF51621 6 877 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 6.1E-291 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 Gene3D G3DSA:1.20.1440.90 273 387 1.2E-30 T 22-04-2016 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PANTHER PTHR30523 1 877 0.0 T 22-04-2016 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 18.026 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 PANTHER PTHR30523:SF3 1 877 0.0 T 22-04-2016 VP2761 fc247a0be3fc2c3852d3723cb9858014 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VP3073 82e9e9accf0408f8b54babd4f81fdf07 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.9E-60 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 VP3073 82e9e9accf0408f8b54babd4f81fdf07 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.302 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VP3073 82e9e9accf0408f8b54babd4f81fdf07 156 PANTHER PTHR33445 1 156 4.5E-48 T 22-04-2016 VP3073 82e9e9accf0408f8b54babd4f81fdf07 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 7.1E-37 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VP3073 82e9e9accf0408f8b54babd4f81fdf07 156 SUPERFAMILY SSF81573 63 121 6.67E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VP3073 82e9e9accf0408f8b54babd4f81fdf07 156 Gene3D G3DSA:1.20.5.620 63 122 3.2E-25 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VP2780 8ebdc2a8c02a61a877d396676fb814b2 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.684 T 22-04-2016 IPR007236 SlyX VP2780 8ebdc2a8c02a61a877d396676fb814b2 75 PANTHER PTHR36508 4 75 5.8E-25 T 22-04-2016 VP2780 8ebdc2a8c02a61a877d396676fb814b2 75 Pfam PF04102 SlyX 9 75 1.8E-24 T 22-04-2016 IPR007236 SlyX VP2780 8ebdc2a8c02a61a877d396676fb814b2 75 Gene3D G3DSA:1.20.5.300 7 55 7.5E-23 T 22-04-2016 VP0450 29839ade2673979eba288b7f09ed4425 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.654 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0450 29839ade2673979eba288b7f09ed4425 287 Gene3D G3DSA:3.40.1010.10 13 121 1.9E-15 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VP0450 29839ade2673979eba288b7f09ed4425 287 Gene3D G3DSA:3.30.950.10 122 235 2.6E-44 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VP0450 29839ade2673979eba288b7f09ed4425 287 PIRSF PIRSF005917 1 286 4.9E-109 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0450 29839ade2673979eba288b7f09ed4425 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 2.7E-103 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0450 29839ade2673979eba288b7f09ed4425 287 PANTHER PTHR21091 9 225 8.0E-93 T 22-04-2016 VP0450 29839ade2673979eba288b7f09ed4425 287 PANTHER PTHR21091:SF18 9 225 8.0E-93 T 22-04-2016 VP0450 29839ade2673979eba288b7f09ed4425 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.0E-29 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VP0450 29839ade2673979eba288b7f09ed4425 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VP0450 29839ade2673979eba288b7f09ed4425 287 SUPERFAMILY SSF53790 12 232 7.46E-86 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VP1360 aab88072a1557bb78857ec2ab0bb8d13 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 6.6E-16 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 VP1615 7628be1129e5a72ec7c4479b5f7aa499 165 SUPERFAMILY SSF54637 12 126 6.34E-15 T 22-04-2016 IPR029069 HotDog domain VP1615 7628be1129e5a72ec7c4479b5f7aa499 165 Pfam PF14539 Domain of unknown function (DUF4442) 18 105 2.9E-10 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 VP1615 7628be1129e5a72ec7c4479b5f7aa499 165 Gene3D G3DSA:3.10.129.10 11 157 7.9E-26 T 22-04-2016 IPR029069 HotDog domain VP0960 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VP0960 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 Gene3D G3DSA:3.40.50.1580 4 251 4.9E-84 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP0960 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 1.7E-110 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 VP0960 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 PANTHER PTHR21234 1 252 1.2E-180 T 22-04-2016 IPR018017 Nucleoside phosphorylase VP0960 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 Pfam PF01048 Phosphorylase superfamily 20 246 4.2E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP0960 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 PANTHER PTHR21234:SF22 1 252 1.2E-180 T 22-04-2016 VP0960 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 SUPERFAMILY SSF53167 4 251 1.83E-72 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF54523 36 100 1.88E-36 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF54523 285 325 1.88E-36 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF158544 215 282 8.63E-20 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 PANTHER PTHR38831 1 336 7.9E-70 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 1.3E-88 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:3.30.1300.30 26 98 1.6E-47 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:3.30.1300.30 286 326 1.6E-47 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:1.10.40.60 216 284 2.7E-27 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 PANTHER PTHR38831:SF1 1 336 7.9E-70 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:1.10.40.60 99 214 1.1E-37 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF158544 101 213 9.42E-33 T 22-04-2016 VP0140 2cab0effdad9fcfba1bd77107c5cb579 336 PIRSF PIRSF002786 1 328 1.6E-65 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VP2263 3206b8c2390c63ddfced1be6b05746c7 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 6.8E-55 T 22-04-2016 IPR021318 Protein of unknown function DUF2919 VP2318 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:1.10.287.610 100 152 3.0E-26 T 22-04-2016 VP2318 f906f65ac86428713f372396bb26d105 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.3E-107 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VP2318 f906f65ac86428713f372396bb26d105 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VP2318 f906f65ac86428713f372396bb26d105 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VP2318 f906f65ac86428713f372396bb26d105 242 SUPERFAMILY SSF52313 6 232 9.03E-96 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain VP2318 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:3.40.50.10490 23 99 3.1E-65 T 22-04-2016 VP2318 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:3.40.50.10490 158 230 3.1E-65 T 22-04-2016 VP2318 f906f65ac86428713f372396bb26d105 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.122 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VP2318 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2318 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2318 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2318 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2318 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2318 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2318 f906f65ac86428713f372396bb26d105 242 PANTHER PTHR12534 1 231 6.6E-123 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VP2318 f906f65ac86428713f372396bb26d105 242 Pfam PF00318 Ribosomal protein S2 9 224 9.9E-94 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0845 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:1.20.58.100 447 555 1.2E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP0845 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.90.700.10 243 349 2.9E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VP0845 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:4.10.80.40 556 588 8.9E-21 T 22-04-2016 VP0845 84bdf563922c8bab6954ca067d761b3c 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.6E-240 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VP0845 84bdf563922c8bab6954ca067d761b3c 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.2E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP0845 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VP0845 84bdf563922c8bab6954ca067d761b3c 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.4E-274 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VP0845 84bdf563922c8bab6954ca067d761b3c 588 PIRSF PIRSF000171 1 580 1.8E-49 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VP0845 84bdf563922c8bab6954ca067d761b3c 588 Pfam PF00890 FAD binding domain 9 405 3.3E-118 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VP0845 84bdf563922c8bab6954ca067d761b3c 588 PANTHER PTHR11632 2 573 0.0 T 22-04-2016 VP0845 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF51905 359 428 1.67E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0845 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF51905 5 259 1.67E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0845 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.50.50.60 351 423 3.9E-116 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0845 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.50.50.60 6 242 3.9E-116 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VP0845 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF46977 452 588 2.75E-46 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VP0845 84bdf563922c8bab6954ca067d761b3c 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VP0845 84bdf563922c8bab6954ca067d761b3c 588 PANTHER PTHR11632:SF5 2 573 0.0 T 22-04-2016 VP1293 6092f123eb20c7f0ff5f8da6b82f2963 292 PANTHER PTHR36838 1 291 1.2E-109 T 22-04-2016 VP1293 6092f123eb20c7f0ff5f8da6b82f2963 292 Pfam PF03547 Membrane transport protein 150 284 7.0E-7 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VP1293 6092f123eb20c7f0ff5f8da6b82f2963 292 PANTHER PTHR36838:SF2 1 291 1.2E-109 T 22-04-2016 VP1807 0c34332b3ebfae99ff3021bda18341cc 135 SUPERFAMILY SSF82784 1 130 7.07E-31 T 22-04-2016 IPR003718 OsmC/Ohr family VP1807 0c34332b3ebfae99ff3021bda18341cc 135 Gene3D G3DSA:3.30.300.20 35 130 7.1E-24 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VP1807 0c34332b3ebfae99ff3021bda18341cc 135 Pfam PF02566 OsmC-like protein 30 126 5.0E-14 T 22-04-2016 IPR003718 OsmC/Ohr family VP1807 0c34332b3ebfae99ff3021bda18341cc 135 PANTHER PTHR34352 1 134 4.8E-26 T 22-04-2016 VP0836 3ef3128db6b17e3e51d02feb5ab367d0 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 4.7E-19 T 22-04-2016 IPR021249 Protein of unknown function DUF2788 VP0020 881c819916d76eb5359167ffc8226eb9 694 SMART SM00642 203 656 3.1E-77 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VP0020 881c819916d76eb5359167ffc8226eb9 694 SUPERFAMILY SSF51445 189 665 5.84E-78 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP0020 881c819916d76eb5359167ffc8226eb9 694 PANTHER PTHR10357:SF11 233 330 1.1E-106 T 22-04-2016 VP0020 881c819916d76eb5359167ffc8226eb9 694 PANTHER PTHR10357:SF11 442 690 1.1E-106 T 22-04-2016 VP0020 881c819916d76eb5359167ffc8226eb9 694 PANTHER PTHR10357:SF11 184 217 1.1E-106 T 22-04-2016 VP0020 881c819916d76eb5359167ffc8226eb9 694 PANTHER PTHR10357:SF11 359 420 1.1E-106 T 22-04-2016 VP0020 881c819916d76eb5359167ffc8226eb9 694 PANTHER PTHR10357 233 330 1.1E-106 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VP0020 881c819916d76eb5359167ffc8226eb9 694 PANTHER PTHR10357 442 690 1.1E-106 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VP0020 881c819916d76eb5359167ffc8226eb9 694 PANTHER PTHR10357 184 217 1.1E-106 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VP0020 881c819916d76eb5359167ffc8226eb9 694 PANTHER PTHR10357 359 420 1.1E-106 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VP0020 881c819916d76eb5359167ffc8226eb9 694 Gene3D G3DSA:3.20.20.80 193 664 1.1E-87 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP0020 881c819916d76eb5359167ffc8226eb9 694 PIRSF PIRSF036917 1 694 0.0 T 22-04-2016 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VP0020 881c819916d76eb5359167ffc8226eb9 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 4.8E-39 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VP1713 2cab6274874ae38a3b89f3c5d9a48740 471 PANTHER PTHR30026:SF5 1 453 1.7E-182 T 22-04-2016 VP1713 2cab6274874ae38a3b89f3c5d9a48740 471 PANTHER PTHR30026 1 453 1.7E-182 T 22-04-2016 VP1713 2cab6274874ae38a3b89f3c5d9a48740 471 Pfam PF02321 Outer membrane efflux protein 28 243 9.9E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP1713 2cab6274874ae38a3b89f3c5d9a48740 471 Pfam PF02321 Outer membrane efflux protein 265 446 1.6E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VP1713 2cab6274874ae38a3b89f3c5d9a48740 471 Gene3D G3DSA:1.20.1600.10 26 445 2.2E-54 T 22-04-2016 VP1713 2cab6274874ae38a3b89f3c5d9a48740 471 SUPERFAMILY SSF56954 9 79 1.96E-67 T 22-04-2016 VP1713 2cab6274874ae38a3b89f3c5d9a48740 471 SUPERFAMILY SSF56954 107 446 1.96E-67 T 22-04-2016 VP1016 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP1016 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1016 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 71 3.9E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP1016 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VP1016 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.5E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VP1016 dcb4525c3e58b45274dc0b85d99859d5 72 PANTHER PTHR33370 1 72 2.5E-50 T 22-04-2016 VP1016 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VP1009 263b5c783631b26b51375b36e2c66eb7 217 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 32 213 1.3E-29 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VP1009 263b5c783631b26b51375b36e2c66eb7 217 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 216 21.475 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VP1821 c8ba6274b0b9cbcc803533aa01e30edb 99 PANTHER PTHR33713:SF6 12 98 7.0E-22 T 22-04-2016 VP1821 c8ba6274b0b9cbcc803533aa01e30edb 99 Gene3D G3DSA:3.40.1620.10 16 65 1.1E-8 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VP1821 c8ba6274b0b9cbcc803533aa01e30edb 99 PANTHER PTHR33713 12 98 7.0E-22 T 22-04-2016 VP1821 c8ba6274b0b9cbcc803533aa01e30edb 99 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 16 89 6.7E-21 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VP1821 c8ba6274b0b9cbcc803533aa01e30edb 99 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 19 70 3.0E-7 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VP1821 c8ba6274b0b9cbcc803533aa01e30edb 99 SUPERFAMILY SSF143120 16 96 2.35E-23 T 22-04-2016 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 2.8E-48 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 PANTHER PTHR10889 5 253 4.8E-115 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.842 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 Gene3D G3DSA:3.20.20.70 3 247 1.3E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 SUPERFAMILY SSF51569 6 245 1.15E-82 T 22-04-2016 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 SMART SM01133 10 244 1.3E-78 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 8.5E-81 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 PIRSF PIRSF001357 5 251 1.3E-76 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VP2436 5c40e574ea2742f9cba8e6a6642507af 258 PANTHER PTHR10889:SF3 5 253 4.8E-115 T 22-04-2016 VP3029 475b1c6fd4ac113640ec7ce81ae96952 57 Pfam PF13592 Winged helix-turn helix 22 51 3.4E-7 T 22-04-2016 IPR025959 Winged helix-turn helix domain VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 PIRSF PIRSF003165 1 162 8.1E-59 T 22-04-2016 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 155 4.4E-44 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 73 95 5.16E-34 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 105 127 5.16E-34 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 24 47 5.16E-34 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 49 68 5.16E-34 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 Pfam PF07720 Tetratricopeptide repeat 39 70 2.9E-7 T 22-04-2016 IPR011716 Tetratricopeptide TPR-3 VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 Pfam PF07720 Tetratricopeptide repeat 77 98 0.11 T 22-04-2016 IPR011716 Tetratricopeptide TPR-3 VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 Gene3D G3DSA:1.25.40.10 36 147 2.6E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1658 b6134f7d23d6deda7a956a3f6d0d027e 162 SUPERFAMILY SSF48452 27 148 5.69E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1924 23d9a46ff70b07e76c0030c0137e5551 177 PANTHER PTHR10681:SF107 4 172 1.4E-31 T 22-04-2016 VP1924 23d9a46ff70b07e76c0030c0137e5551 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 38 169 4.5E-40 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VP1924 23d9a46ff70b07e76c0030c0137e5551 177 PANTHER PTHR10681 4 172 1.4E-31 T 22-04-2016 VP1924 23d9a46ff70b07e76c0030c0137e5551 177 SUPERFAMILY SSF52833 44 174 3.09E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1924 23d9a46ff70b07e76c0030c0137e5551 177 Gene3D G3DSA:3.40.30.10 15 173 3.1E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1924 23d9a46ff70b07e76c0030c0137e5551 177 Pfam PF08534 Redoxin 44 155 1.7E-12 T 22-04-2016 IPR013740 Redoxin GO:0016491 VP2635 816a9d4ada2159d98d21889893eae897 103 PANTHER PTHR34382 1 103 2.4E-44 T 22-04-2016 VP2635 816a9d4ada2159d98d21889893eae897 103 PANTHER PTHR34382:SF2 1 103 2.4E-44 T 22-04-2016 VP2635 816a9d4ada2159d98d21889893eae897 103 Gene3D G3DSA:1.20.58.80 2 100 9.6E-38 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP2635 816a9d4ada2159d98d21889893eae897 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 1.2E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP2635 816a9d4ada2159d98d21889893eae897 103 SUPERFAMILY SSF46973 2 98 4.32E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP2635 816a9d4ada2159d98d21889893eae897 103 PIRSF PIRSF000699 1 103 2.2E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VP2799 243de683b58f76c82b1ff79e177588db 984 Pfam PF00932 Lamin Tail Domain 21 130 7.4E-15 T 22-04-2016 IPR001322 Lamin Tail Domain VP2799 243de683b58f76c82b1ff79e177588db 984 Gene3D G3DSA:3.60.10.10 752 841 2.6E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP2799 243de683b58f76c82b1ff79e177588db 984 Gene3D G3DSA:3.60.10.10 475 719 2.6E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP2799 243de683b58f76c82b1ff79e177588db 984 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 963 983 0.0033 T 22-04-2016 IPR020008 GlyGly-CTERM domain VP2799 243de683b58f76c82b1ff79e177588db 984 SUPERFAMILY SSF56219 473 844 4.75E-35 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP2799 243de683b58f76c82b1ff79e177588db 984 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 478 836 4.8E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP2799 243de683b58f76c82b1ff79e177588db 984 PANTHER PTHR33607 751 912 1.9E-157 T 22-04-2016 VP2799 243de683b58f76c82b1ff79e177588db 984 PANTHER PTHR33607 7 484 1.9E-157 T 22-04-2016 VP2799 243de683b58f76c82b1ff79e177588db 984 PANTHER PTHR33607 505 725 1.9E-157 T 22-04-2016 VP2799 243de683b58f76c82b1ff79e177588db 984 PANTHER PTHR33607:SF1 751 912 1.9E-157 T 22-04-2016 VP2799 243de683b58f76c82b1ff79e177588db 984 PANTHER PTHR33607:SF1 7 484 1.9E-157 T 22-04-2016 VP2799 243de683b58f76c82b1ff79e177588db 984 PANTHER PTHR33607:SF1 505 725 1.9E-157 T 22-04-2016 VP0028 149dded806330fac3357866738fae25b 326 SUPERFAMILY SSF51735 116 289 1.66E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0028 149dded806330fac3357866738fae25b 326 SUPERFAMILY SSF50129 2 145 5.33E-45 T 22-04-2016 IPR011032 GroES-like VP0028 149dded806330fac3357866738fae25b 326 Gene3D G3DSA:3.90.180.10 4 87 1.3E-9 T 22-04-2016 IPR011032 GroES-like VP0028 149dded806330fac3357866738fae25b 326 PANTHER PTHR11695 16 326 2.9E-165 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VP0028 149dded806330fac3357866738fae25b 326 PANTHER PTHR11695:SF13 16 326 2.9E-165 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VP0028 149dded806330fac3357866738fae25b 326 Gene3D G3DSA:3.40.50.720 126 291 1.0E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0028 149dded806330fac3357866738fae25b 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.7E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VP0028 149dded806330fac3357866738fae25b 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.5E-139 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VP0028 149dded806330fac3357866738fae25b 326 SMART SM00829 13 324 3.4E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VP0028 149dded806330fac3357866738fae25b 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 9.8E-11 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VPA1310 5ada92518635acc01b2666d1670993c4 43 Pfam PF08439 Oligopeptidase F 4 43 7.2E-9 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain VP0308 91bce692eb0c03111091d424d644f4a1 1255 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 920 1254 5.2E-65 T 22-04-2016 IPR007452 Translocation and assembly module TamB VP0308 91bce692eb0c03111091d424d644f4a1 1255 PANTHER PTHR36985 1 1255 4.2E-298 T 22-04-2016 VP0591 b529e9240565ccf23b3edc724e246146 315 PANTHER PTHR30081 3 314 5.3E-92 T 22-04-2016 VP0591 b529e9240565ccf23b3edc724e246146 315 SUPERFAMILY SSF82866 74 293 2.22E-41 T 22-04-2016 VP0591 b529e9240565ccf23b3edc724e246146 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.889 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VP0591 b529e9240565ccf23b3edc724e246146 315 Pfam PF02355 Protein export membrane protein 111 292 4.1E-71 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VP0591 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VP0591 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VP0591 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VP0591 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VP0591 b529e9240565ccf23b3edc724e246146 315 Gene3D G3DSA:1.20.1640.10 130 294 1.4E-26 T 22-04-2016 VP0591 b529e9240565ccf23b3edc724e246146 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 3.1E-56 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VP0591 b529e9240565ccf23b3edc724e246146 315 Pfam PF07549 SecD/SecF GG Motif 35 60 1.3E-10 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VP0591 b529e9240565ccf23b3edc724e246146 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 2.9E-86 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VP1466 f1d1196363776bd463e36b32fd140397 390 Gene3D G3DSA:3.40.50.2000 260 332 4.9E-8 T 22-04-2016 VP1466 f1d1196363776bd463e36b32fd140397 390 Pfam PF00534 Glycosyl transferases group 1 192 336 1.6E-12 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VP1466 f1d1196363776bd463e36b32fd140397 390 SUPERFAMILY SSF53756 10 359 1.05E-28 T 22-04-2016 VP1558 ce6c315e6814ecde657c8f96670cc24a 461 Pfam PF05707 Zonular occludens toxin (Zot) 2 255 9.7E-78 T 22-04-2016 IPR008900 Zona occludens toxin VP1558 ce6c315e6814ecde657c8f96670cc24a 461 Gene3D G3DSA:3.40.50.300 170 237 6.6E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1558 ce6c315e6814ecde657c8f96670cc24a 461 Gene3D G3DSA:3.40.50.300 4 116 6.6E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1240 d9fcbe21e48a055cfc15c8d2075822b0 306 Gene3D G3DSA:1.10.3150.10 14 301 1.8E-53 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VP1240 d9fcbe21e48a055cfc15c8d2075822b0 306 SUPERFAMILY SSF109604 24 296 7.53E-39 T 22-04-2016 VP1240 d9fcbe21e48a055cfc15c8d2075822b0 306 PANTHER PTHR33525 16 306 1.1E-104 T 22-04-2016 VP1240 d9fcbe21e48a055cfc15c8d2075822b0 306 PANTHER PTHR33525:SF2 16 306 1.1E-104 T 22-04-2016 VP1240 d9fcbe21e48a055cfc15c8d2075822b0 306 Pfam PF08668 HDOD domain 39 233 5.3E-36 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VP1833 ff85ac9fad23e2948faf109ee0ad26ff 33 Pfam PF11665 Protein of unknown function (DUF3265) 6 33 5.0E-15 T 22-04-2016 IPR021681 Protein of unknown function DUF3265 VP1727 05e767fbe0097788b56d9b18e11cf85f 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 314 3.9E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1727 05e767fbe0097788b56d9b18e11cf85f 361 PANTHER PTHR30177 54 325 5.5E-128 T 22-04-2016 VP1727 05e767fbe0097788b56d9b18e11cf85f 361 PANTHER PTHR30177:SF2 54 325 5.5E-128 T 22-04-2016 VP1727 05e767fbe0097788b56d9b18e11cf85f 361 SUPERFAMILY SSF161098 136 318 3.92E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1727 05e767fbe0097788b56d9b18e11cf85f 361 Gene3D G3DSA:1.10.3720.10 133 319 2.0E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 PANTHER PTHR11918:SF43 1 474 5.1E-231 T 22-04-2016 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 Gene3D G3DSA:3.80.30.20 147 377 3.0E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 Pfam PF04055 Radical SAM superfamily 151 325 1.2E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.7E-30 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 SUPERFAMILY SSF102114 122 374 1.03E-61 T 22-04-2016 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 3.1E-200 T 22-04-2016 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 PANTHER PTHR11918 1 474 5.1E-231 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 Pfam PF01938 TRAM domain 381 440 7.5E-17 T 22-04-2016 IPR002792 TRAM domain VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.757 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 8.0E-153 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 VP0733 b7ce2a3235c29cdd8b1e7274f523cedf 474 SMART SM00729 147 367 3.0E-63 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VP0589 ef73bfe6ce40993c8548493c2f8e8b3f 109 PANTHER PTHR33909:SF1 1 109 1.2E-34 T 22-04-2016 VP0589 ef73bfe6ce40993c8548493c2f8e8b3f 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC VP0589 ef73bfe6ce40993c8548493c2f8e8b3f 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC VP0589 ef73bfe6ce40993c8548493c2f8e8b3f 109 Pfam PF02699 Preprotein translocase subunit 21 98 6.5E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC VP0589 ef73bfe6ce40993c8548493c2f8e8b3f 109 SMART SM01323 17 101 1.1E-38 T 22-04-2016 IPR003849 Preprotein translocase YajC VP0589 ef73bfe6ce40993c8548493c2f8e8b3f 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 1.3E-30 T 22-04-2016 IPR003849 Preprotein translocase YajC VP0589 ef73bfe6ce40993c8548493c2f8e8b3f 109 PANTHER PTHR33909 1 109 1.2E-34 T 22-04-2016 VP1091 263f9983f5a2bb6483fdc010955473a8 379 PANTHER PTHR30158:SF3 2 378 5.0E-153 T 22-04-2016 VP1091 263f9983f5a2bb6483fdc010955473a8 379 Gene3D G3DSA:2.40.50.100 64 97 8.1E-24 T 22-04-2016 VP1091 263f9983f5a2bb6483fdc010955473a8 379 Gene3D G3DSA:2.40.50.100 172 206 8.1E-24 T 22-04-2016 VP1091 263f9983f5a2bb6483fdc010955473a8 379 SUPERFAMILY SSF111369 51 297 3.4E-81 T 22-04-2016 VP1091 263f9983f5a2bb6483fdc010955473a8 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 373 2.6E-84 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VP1091 263f9983f5a2bb6483fdc010955473a8 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 291 9.5E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VP1091 263f9983f5a2bb6483fdc010955473a8 379 PANTHER PTHR30158 2 378 5.0E-153 T 22-04-2016 VP0753 5305cf44e418c51f99301ad050b0b3dd 290 Pfam PF01963 TraB family 26 278 8.8E-53 T 22-04-2016 IPR002816 Pheromone shutdown, TraB VP0753 5305cf44e418c51f99301ad050b0b3dd 290 PANTHER PTHR40590 1 290 1.6E-66 T 22-04-2016 VP0940 b285e59d47f31ca80d02831d724631ed 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 259 4.8E-29 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VP0940 b285e59d47f31ca80d02831d724631ed 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 340 1.7E-86 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VP0940 b285e59d47f31ca80d02831d724631ed 364 PANTHER PTHR30469:SF13 1 348 1.0E-181 T 22-04-2016 VP0940 b285e59d47f31ca80d02831d724631ed 364 Gene3D G3DSA:2.40.50.100 60 93 2.6E-16 T 22-04-2016 VP0940 b285e59d47f31ca80d02831d724631ed 364 Gene3D G3DSA:2.40.50.100 154 185 2.6E-16 T 22-04-2016 VP0940 b285e59d47f31ca80d02831d724631ed 364 PANTHER PTHR30469 1 348 1.0E-181 T 22-04-2016 VP0940 b285e59d47f31ca80d02831d724631ed 364 SUPERFAMILY SSF111369 49 264 6.54E-39 T 22-04-2016 VP1594 f96ec9f534d97b661e6d6b21c40b8fe4 598 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 579 598 0.0011 T 22-04-2016 IPR020008 GlyGly-CTERM domain VP1594 f96ec9f534d97b661e6d6b21c40b8fe4 598 Pfam PF11949 Protein of unknown function (DUF3466) 6 217 4.6E-7 T 22-04-2016 IPR022562 Protein of unknown function DUF3466 VP1594 f96ec9f534d97b661e6d6b21c40b8fe4 598 Pfam PF11949 Protein of unknown function (DUF3466) 294 598 1.9E-49 T 22-04-2016 IPR022562 Protein of unknown function DUF3466 VPA0109 034e06e20faba9382c168f9e9bee7c3e 105 Pfam PF00892 EamA-like transporter family 19 104 8.3E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPA0109 034e06e20faba9382c168f9e9bee7c3e 105 PANTHER PTHR22911 1 105 5.3E-55 T 22-04-2016 VPA0109 034e06e20faba9382c168f9e9bee7c3e 105 PANTHER PTHR22911:SF58 1 105 5.3E-55 T 22-04-2016 VP2357 a8a6cfccdc7a24ca3423752713e8ee23 219 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 216 5.4E-74 T 22-04-2016 IPR012807 Anti-sigma factor ChrR, putative VP2357 a8a6cfccdc7a24ca3423752713e8ee23 219 Pfam PF12973 ChrR Cupin-like domain 127 193 8.0E-14 T 22-04-2016 IPR025979 ChrR-like cupin domain VP2357 a8a6cfccdc7a24ca3423752713e8ee23 219 Gene3D G3DSA:2.60.120.10 131 202 2.4E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP2357 a8a6cfccdc7a24ca3423752713e8ee23 219 SUPERFAMILY SSF51182 113 203 1.91E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain VP1197 085d14be9fca6f9dc0a6e4e9662dfbde 225 PANTHER PTHR12677:SF5 4 202 5.0E-39 T 22-04-2016 VP1197 085d14be9fca6f9dc0a6e4e9662dfbde 225 Pfam PF09335 SNARE associated Golgi protein 62 178 1.3E-24 T 22-04-2016 IPR032816 SNARE associated Golgi protein VP1197 085d14be9fca6f9dc0a6e4e9662dfbde 225 PANTHER PTHR12677 4 202 5.0E-39 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VP1455 ce4b206c108e8a9637b17a4b4bbd100a 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 5.1E-19 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VP1455 ce4b206c108e8a9637b17a4b4bbd100a 171 Gene3D G3DSA:2.40.160.20 7 170 1.5E-26 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP1455 ce4b206c108e8a9637b17a4b4bbd100a 171 SUPERFAMILY SSF56925 19 170 8.37E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPA0452 e759198f42af8a3daf6087250b4d9183 184 Pfam PF02167 Cytochrome C1 family 29 130 9.3E-8 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VPA0452 e759198f42af8a3daf6087250b4d9183 184 SUPERFAMILY SSF46626 12 156 1.23E-45 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPA0452 e759198f42af8a3daf6087250b4d9183 184 Gene3D G3DSA:1.10.760.10 12 166 3.5E-55 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPA0452 e759198f42af8a3daf6087250b4d9183 184 PANTHER PTHR10266:SF3 1 154 1.1E-52 T 22-04-2016 VPA0452 e759198f42af8a3daf6087250b4d9183 184 PANTHER PTHR10266 1 154 1.1E-52 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 PANTHER PTHR21631 3 436 4.4E-173 T 22-04-2016 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 SUPERFAMILY SSF51621 6 436 4.93E-153 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 Gene3D G3DSA:3.20.20.60 7 419 4.1E-169 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 Pfam PF00463 Isocitrate lyase family 258 436 8.9E-53 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 Pfam PF00463 Isocitrate lyase family 14 257 5.8E-62 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 PIRSF PIRSF001362 1 436 1.9E-224 T 22-04-2016 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 2.9E-90 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VP0584 ad20daf92603b9769e14f1f9b58621c1 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 1.3E-113 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VP2110 f6052482c0bd65097e9bdc0a4aff783f 144 Gene3D G3DSA:1.25.40.10 8 106 6.1E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2110 f6052482c0bd65097e9bdc0a4aff783f 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 2.7E-76 T 22-04-2016 IPR020206 Uncharacterised protein family, VP2110 VP2110 f6052482c0bd65097e9bdc0a4aff783f 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 3.0E-72 T 22-04-2016 IPR020206 Uncharacterised protein family, VP2110 VP1336 2498b806f6638d331e9b344e7b455c86 373 Pfam PF08402 TOBE domain 283 361 1.1E-15 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VP1336 2498b806f6638d331e9b344e7b455c86 373 SMART SM00382 34 217 2.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VP1336 2498b806f6638d331e9b344e7b455c86 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 358 6.1E-116 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VP1336 2498b806f6638d331e9b344e7b455c86 373 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP1336 2498b806f6638d331e9b344e7b455c86 373 SUPERFAMILY SSF50331 242 361 1.93E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VP1336 2498b806f6638d331e9b344e7b455c86 373 SUPERFAMILY SSF52540 9 246 1.19E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1336 2498b806f6638d331e9b344e7b455c86 373 Gene3D G3DSA:3.40.50.300 6 241 6.0E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1336 2498b806f6638d331e9b344e7b455c86 373 PANTHER PTHR24220:SF402 264 334 1.3E-161 T 22-04-2016 VP1336 2498b806f6638d331e9b344e7b455c86 373 PANTHER PTHR24220:SF402 10 246 1.3E-161 T 22-04-2016 VP1336 2498b806f6638d331e9b344e7b455c86 373 Pfam PF00005 ABC transporter 26 167 4.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP1336 2498b806f6638d331e9b344e7b455c86 373 PANTHER PTHR24220 264 334 1.3E-161 T 22-04-2016 VP1336 2498b806f6638d331e9b344e7b455c86 373 PANTHER PTHR24220 10 246 1.3E-161 T 22-04-2016 VP0096 58463f947d0a95c8adf1a07bed89c1a7 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.1E-23 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VP0096 58463f947d0a95c8adf1a07bed89c1a7 211 Gene3D G3DSA:3.30.1050.10 32 116 5.1E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VP0096 58463f947d0a95c8adf1a07bed89c1a7 211 PANTHER PTHR38693:SF1 1 205 5.4E-68 T 22-04-2016 VP0096 58463f947d0a95c8adf1a07bed89c1a7 211 SUPERFAMILY SSF55718 15 117 3.53E-11 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VP0096 58463f947d0a95c8adf1a07bed89c1a7 211 PANTHER PTHR38693 1 205 5.4E-68 T 22-04-2016 VP0938 950e8447808fdad7d67603b1266a5a1a 196 PANTHER PTHR30055 1 196 8.8E-83 T 22-04-2016 VP0938 950e8447808fdad7d67603b1266a5a1a 196 PANTHER PTHR30055:SF85 1 196 8.8E-83 T 22-04-2016 VP0938 950e8447808fdad7d67603b1266a5a1a 196 SUPERFAMILY SSF46689 4 77 5.82E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0938 950e8447808fdad7d67603b1266a5a1a 196 SUPERFAMILY SSF48498 82 195 3.0E-19 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VP0938 950e8447808fdad7d67603b1266a5a1a 196 Gene3D G3DSA:1.10.357.10 2 193 5.3E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VP0938 950e8447808fdad7d67603b1266a5a1a 196 Pfam PF13305 WHG domain 93 172 5.0E-10 T 22-04-2016 IPR025996 WHG domain VP2171 22519aafa5bea0bd81fde397c22af33a 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 2.4E-6 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VP2171 22519aafa5bea0bd81fde397c22af33a 82 PANTHER PTHR36931 1 82 1.7E-39 T 22-04-2016 VP1272 aa93e963a346d91b5dd66f01138a8c3f 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 5.5E-99 T 22-04-2016 IPR021974 Protein of unknown function DUF3581 VP1449 0017a3bc420ffacb1987ac7a7bcf469b 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 276 5.3E-51 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 VP1449 0017a3bc420ffacb1987ac7a7bcf469b 283 PANTHER PTHR38095 1 282 3.1E-55 T 22-04-2016 VP1449 0017a3bc420ffacb1987ac7a7bcf469b 283 PANTHER PTHR38095:SF2 1 282 3.1E-55 T 22-04-2016 VP1166 758e594d86f852528cd004629150bf82 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.3E-37 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 VP0922 4590abad3ee17912337893532dd0fbdc 99 Pfam PF12836 Helix-hairpin-helix motif 37 97 1.2E-22 T 22-04-2016 VP0922 4590abad3ee17912337893532dd0fbdc 99 Gene3D G3DSA:1.10.150.280 26 99 1.3E-20 T 22-04-2016 VP0922 4590abad3ee17912337893532dd0fbdc 99 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 37 99 2.3E-26 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VP0922 4590abad3ee17912337893532dd0fbdc 99 SMART SM00278 77 96 69.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP0922 4590abad3ee17912337893532dd0fbdc 99 SMART SM00278 47 66 5.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VP0922 4590abad3ee17912337893532dd0fbdc 99 SUPERFAMILY SSF47781 32 99 8.56E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VP0922 4590abad3ee17912337893532dd0fbdc 99 PANTHER PTHR21180 35 97 1.4E-23 T 22-04-2016 VP0839 e7ce00d4217127e32e9bb603998be892 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 9.0E-9 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 Gene3D G3DSA:3.30.310.50 466 543 1.4E-31 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 Gene3D G3DSA:3.40.120.10 225 317 5.2E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 SUPERFAMILY SSF55957 433 543 1.26E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 9.2E-41 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 Gene3D G3DSA:3.40.120.10 318 441 8.4E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 SUPERFAMILY SSF53738 305 446 6.28E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 SUPERFAMILY SSF53738 27 235 2.05E-52 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 1.3E-28 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VP0839 e7ce00d4217127e32e9bb603998be892 548 PANTHER PTHR22573:SF52 18 543 1.5E-281 T 22-04-2016 VP0839 e7ce00d4217127e32e9bb603998be892 548 SUPERFAMILY SSF53738 209 317 2.59E-8 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 4.7E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 Gene3D G3DSA:3.40.120.10 30 224 4.0E-61 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VP0839 e7ce00d4217127e32e9bb603998be892 548 PANTHER PTHR22573 18 543 1.5E-281 T 22-04-2016 VP2241 991410c0da12b5697f6a38786f12faea 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VP2241 991410c0da12b5697f6a38786f12faea 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VP2241 991410c0da12b5697f6a38786f12faea 136 Gene3D G3DSA:2.30.330.10 47 136 5.7E-38 T 22-04-2016 VP2241 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VP2241 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VP2241 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VP2241 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VP2241 991410c0da12b5697f6a38786f12faea 136 PANTHER PTHR22617 4 135 7.6E-35 T 22-04-2016 VP2241 991410c0da12b5697f6a38786f12faea 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.4E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 Pfam PF00106 short chain dehydrogenase 5 189 2.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 SUPERFAMILY SSF51735 3 229 1.23E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 Gene3D G3DSA:3.40.50.720 3 229 1.4E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.732172E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.732172E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.000915E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.000915E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.000915E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.000915E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PANTHER PTHR24322 151 183 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2146 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PANTHER PTHR24322 7 132 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2028 ec4afc3122cd5fb9f7e7b07a13a04ac2 97 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.821 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VP2028 ec4afc3122cd5fb9f7e7b07a13a04ac2 97 Pfam PF06305 Protein of unknown function (DUF1049) 22 81 1.0E-17 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VP2341 98f15293d0a3d1cd3ffa3863025df166 185 Gene3D G3DSA:3.10.50.30 107 184 7.3E-12 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VP2341 98f15293d0a3d1cd3ffa3863025df166 185 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 110 184 3.0E-7 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VP2341 98f15293d0a3d1cd3ffa3863025df166 185 SUPERFAMILY SSF54534 109 184 3.01E-10 T 22-04-2016 VP2364 92bafae9fc1bf60c79891f5f2a2e6742 199 PANTHER PTHR11019 1 194 2.4E-60 T 22-04-2016 VP2364 92bafae9fc1bf60c79891f5f2a2e6742 199 PANTHER PTHR11019:SF4 1 194 2.4E-60 T 22-04-2016 VP2364 92bafae9fc1bf60c79891f5f2a2e6742 199 SUPERFAMILY SSF52317 3 190 9.51E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP2364 92bafae9fc1bf60c79891f5f2a2e6742 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 1.5E-62 T 22-04-2016 IPR006287 DJ-1 VP2364 92bafae9fc1bf60c79891f5f2a2e6742 199 Pfam PF01965 DJ-1/PfpI family 3 169 6.2E-40 T 22-04-2016 IPR002818 DJ-1/PfpI VP2364 92bafae9fc1bf60c79891f5f2a2e6742 199 Gene3D G3DSA:3.40.50.880 1 188 1.3E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VP1521 2128b06d3322f20b04d193336c54abfe 299 Pfam PF15575 Immunity protein 49 67 283 4.3E-42 T 22-04-2016 IPR029074 Immunity protein 49 VP3078 625359bdc1ecc30e97ba780b77e29dd9 257 Pfam PF13614 AAA domain 2 178 3.5E-62 T 22-04-2016 IPR025669 AAA domain VP3078 625359bdc1ecc30e97ba780b77e29dd9 257 SUPERFAMILY SSF52540 2 254 4.12E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3078 625359bdc1ecc30e97ba780b77e29dd9 257 Gene3D G3DSA:3.40.50.300 3 254 3.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP3078 625359bdc1ecc30e97ba780b77e29dd9 257 PANTHER PTHR13696 2 254 3.2E-89 T 22-04-2016 VP3078 625359bdc1ecc30e97ba780b77e29dd9 257 PANTHER PTHR13696:SF52 2 254 3.2E-89 T 22-04-2016 VP1588 eea1d9ac7065ee02fdbd1e27d24431d7 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 101 6.0E-43 T 22-04-2016 IPR022090 Protein of unknown function DUF3634 VPA0580 050778ed0932e664caa4f8e136cdb883 122 PANTHER PTHR11638 1 122 1.6E-40 T 22-04-2016 VPA0580 050778ed0932e664caa4f8e136cdb883 122 SUPERFAMILY SSF52540 2 122 7.96E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA0580 050778ed0932e664caa4f8e136cdb883 122 PANTHER PTHR11638:SF18 1 122 1.6E-40 T 22-04-2016 VPA0580 050778ed0932e664caa4f8e136cdb883 122 Gene3D G3DSA:1.10.8.60 1 47 2.3E-15 T 22-04-2016 VP0731 8ba9d76a2735b3a9722db6d5f14d4b35 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site VP0731 8ba9d76a2735b3a9722db6d5f14d4b35 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.1E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VP0731 8ba9d76a2735b3a9722db6d5f14d4b35 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.0E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VP0731 8ba9d76a2735b3a9722db6d5f14d4b35 154 PANTHER PTHR22881 1 153 1.8E-66 T 22-04-2016 VP0731 8ba9d76a2735b3a9722db6d5f14d4b35 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.576 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VP0731 8ba9d76a2735b3a9722db6d5f14d4b35 154 Gene3D G3DSA:3.40.390.30 12 152 1.3E-50 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 VP0731 8ba9d76a2735b3a9722db6d5f14d4b35 154 SUPERFAMILY SSF55486 3 150 2.12E-49 T 22-04-2016 VP1583 46ce6abcf533d0cf2a635c6c89fd90ec 605 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 109 462 2.1E-85 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 VP0164 31b6dfdeff52eba56df1887a51c23424 135 PANTHER PTHR30558 1 135 3.2E-33 T 22-04-2016 VP0164 31b6dfdeff52eba56df1887a51c23424 135 PANTHER PTHR30558:SF3 1 135 3.2E-33 T 22-04-2016 VP0164 31b6dfdeff52eba56df1887a51c23424 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 2.7E-32 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VP0331 3743f9bc0a9745b693d7c032ddec0bf4 266 Pfam PF06738 Putative threonine/serine exporter 21 258 3.4E-67 T 22-04-2016 IPR010619 Putative threonine/serine exporter VP0331 3743f9bc0a9745b693d7c032ddec0bf4 266 PANTHER PTHR34390 1 266 3.7E-125 T 22-04-2016 VP0331 3743f9bc0a9745b693d7c032ddec0bf4 266 PANTHER PTHR34390:SF2 1 266 3.7E-125 T 22-04-2016 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 SUPERFAMILY SSF161098 18 257 2.49E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 356 512 2.9E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 256 7.1E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 PANTHER PTHR30183:SF8 2 528 2.1E-216 T 22-04-2016 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 518 4.3E-162 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 PANTHER PTHR30183 2 528 2.1E-216 T 22-04-2016 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 Gene3D G3DSA:1.10.3720.10 34 258 3.6E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 Gene3D G3DSA:1.10.3720.10 284 526 2.9E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0317 edb5cd7dcaddf53f65c0db971d6d57c1 528 SUPERFAMILY SSF161098 283 521 7.19E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1665 1f57e35a732db58c2b254c77f2e72be2 123 SUPERFAMILY SSF69635 2 121 3.81E-45 T 22-04-2016 VP1665 1f57e35a732db58c2b254c77f2e72be2 123 Pfam PF05932 Tir chaperone protein (CesT) family 9 117 2.1E-6 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VP1665 1f57e35a732db58c2b254c77f2e72be2 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 5.7E-46 T 22-04-2016 IPR012673 Type III secretion system chaperone SycN GO:0009306 VP0752 30b5b3e31517701c813c5d01ca8cc9be 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.6E-16 T 22-04-2016 IPR021494 Protein of unknown function DUF3149 VP2636 2cb55ab4bbded94cf21b7321df0c8ee3 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 427 2.3E-112 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VP2636 2cb55ab4bbded94cf21b7321df0c8ee3 447 PANTHER PTHR33989 6 446 1.4E-184 T 22-04-2016 VP2636 2cb55ab4bbded94cf21b7321df0c8ee3 447 PIRSF PIRSF006351 7 438 5.9E-146 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VP2636 2cb55ab4bbded94cf21b7321df0c8ee3 447 PANTHER PTHR33989:SF4 6 446 1.4E-184 T 22-04-2016 VP2636 2cb55ab4bbded94cf21b7321df0c8ee3 447 Pfam PF02378 Phosphotransferase system, EIIC 35 354 3.6E-64 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VP0638 8a712494d42a9252840d5ba7528c7e68 216 Gene3D G3DSA:3.40.50.1390 13 142 2.6E-28 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VP0638 8a712494d42a9252840d5ba7528c7e68 216 Pfam PF00239 Resolvase, N terminal domain 14 157 9.7E-29 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VP0638 8a712494d42a9252840d5ba7528c7e68 216 ProSitePatterns PS00398 Site-specific recombinases signature 2. 70 82 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VP0638 8a712494d42a9252840d5ba7528c7e68 216 Gene3D G3DSA:1.10.10.60 167 207 2.6E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0638 8a712494d42a9252840d5ba7528c7e68 216 SMART SM00857 14 160 5.3E-36 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VP0638 8a712494d42a9252840d5ba7528c7e68 216 SUPERFAMILY SSF53041 13 157 1.57E-27 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VP0638 8a712494d42a9252840d5ba7528c7e68 216 ProSitePatterns PS00397 Site-specific recombinases active site. 17 25 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VP0638 8a712494d42a9252840d5ba7528c7e68 216 PANTHER PTHR30461:SF9 1 205 5.5E-20 T 22-04-2016 VP0638 8a712494d42a9252840d5ba7528c7e68 216 Pfam PF13384 Homeodomain-like domain 172 213 3.9E-9 T 22-04-2016 VP0638 8a712494d42a9252840d5ba7528c7e68 216 SUPERFAMILY SSF46689 170 215 2.6E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP0638 8a712494d42a9252840d5ba7528c7e68 216 PANTHER PTHR30461 1 205 5.5E-20 T 22-04-2016 VP1880 c900ee3c060b17825b73b4548f0fd598 453 Gene3D G3DSA:3.30.1330.90 10 157 5.0E-53 T 22-04-2016 IPR029009 Allosteric substrate binding domain VP1880 c900ee3c060b17825b73b4548f0fd598 453 PANTHER PTHR30182 1 453 0.0 T 22-04-2016 VP1880 c900ee3c060b17825b73b4548f0fd598 453 SUPERFAMILY SSF143548 16 157 2.09E-44 T 22-04-2016 IPR029009 Allosteric substrate binding domain VP1880 c900ee3c060b17825b73b4548f0fd598 453 PANTHER PTHR30182:SF5 1 453 0.0 T 22-04-2016 VP1880 c900ee3c060b17825b73b4548f0fd598 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.1E-98 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit VP1880 c900ee3c060b17825b73b4548f0fd598 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.3E-54 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VP1880 c900ee3c060b17825b73b4548f0fd598 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.6E-227 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VP0967 476e23932954f05f43da436b97f935fd 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 9 185 5.5E-65 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB VP0967 476e23932954f05f43da436b97f935fd 196 PANTHER PTHR40593 1 196 6.1E-96 T 22-04-2016 VP0967 476e23932954f05f43da436b97f935fd 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 3.5E-74 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB VP0967 476e23932954f05f43da436b97f935fd 196 Gene3D G3DSA:3.30.1830.10 17 50 7.6E-4 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 VP0568 0308c42b6ff6955cca0dc28602f51279 304 PANTHER PTHR38103 2 304 4.4E-161 T 22-04-2016 VP0568 0308c42b6ff6955cca0dc28602f51279 304 PANTHER PTHR38103:SF1 2 304 4.4E-161 T 22-04-2016 VP0568 0308c42b6ff6955cca0dc28602f51279 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 6.7E-127 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VP0568 0308c42b6ff6955cca0dc28602f51279 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.112 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VP0990 fc1333f4bddac08923c0f74664701605 166 SUPERFAMILY SSF116960 1 166 1.22E-65 T 22-04-2016 VP0990 fc1333f4bddac08923c0f74664701605 166 PIRSF PIRSF006272 1 166 6.5E-79 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VP0990 fc1333f4bddac08923c0f74664701605 166 Gene3D G3DSA:1.10.3190.10 53 166 2.7E-47 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain VP0990 fc1333f4bddac08923c0f74664701605 166 Gene3D G3DSA:1.10.287.680 1 52 5.3E-30 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain VP0990 fc1333f4bddac08923c0f74664701605 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.917 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VP0990 fc1333f4bddac08923c0f74664701605 166 Pfam PF03887 YfbU domain 1 166 2.2E-70 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VP0990 fc1333f4bddac08923c0f74664701605 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 8.0E-96 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VP3043 8929626b6b907f71b4c09288e8517f53 315 PANTHER PTHR11138 5 305 1.9E-118 T 22-04-2016 VP3043 8929626b6b907f71b4c09288e8517f53 315 Gene3D G3DSA:3.40.50.170 4 208 1.9E-75 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP3043 8929626b6b907f71b4c09288e8517f53 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 1.5E-108 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP3043 8929626b6b907f71b4c09288e8517f53 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 4.9E-29 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP3043 8929626b6b907f71b4c09288e8517f53 315 SUPERFAMILY SSF53328 5 210 1.06E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP3043 8929626b6b907f71b4c09288e8517f53 315 Pfam PF00551 Formyl transferase 6 182 1.6E-47 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP3043 8929626b6b907f71b4c09288e8517f53 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP3043 8929626b6b907f71b4c09288e8517f53 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.95 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP3043 8929626b6b907f71b4c09288e8517f53 315 SUPERFAMILY SSF50486 208 310 4.12E-33 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 VP3043 8929626b6b907f71b4c09288e8517f53 315 Gene3D G3DSA:3.10.25.10 210 307 1.1E-35 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VP2127 20bb0ea64db33ae7c2f83b0d986c8332 429 SUPERFAMILY SSF47226 309 422 2.09E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2127 20bb0ea64db33ae7c2f83b0d986c8332 429 Gene3D G3DSA:1.20.120.160 308 415 1.3E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2127 20bb0ea64db33ae7c2f83b0d986c8332 429 Pfam PF01627 Hpt domain 333 409 7.0E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP0439 12c41656d3bf24a2432f199024a47839 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.87 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid VP0439 12c41656d3bf24a2432f199024a47839 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.9E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VP0439 12c41656d3bf24a2432f199024a47839 130 Gene3D G3DSA:3.30.230.10 4 130 4.7E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VP0439 12c41656d3bf24a2432f199024a47839 130 PANTHER PTHR21569 1 130 6.6E-72 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VP0439 12c41656d3bf24a2432f199024a47839 130 SUPERFAMILY SSF54211 5 130 3.53E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VP0439 12c41656d3bf24a2432f199024a47839 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VP0337 07c172729de7c4418b3f06e284fda2eb 332 Gene3D G3DSA:3.40.718.10 3 331 2.3E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VP0337 07c172729de7c4418b3f06e284fda2eb 332 PANTHER PTHR30004:SF5 3 331 1.1E-204 T 22-04-2016 VP0337 07c172729de7c4418b3f06e284fda2eb 332 SUPERFAMILY SSF53659 6 330 2.72E-109 T 22-04-2016 VP0337 07c172729de7c4418b3f06e284fda2eb 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 1.4E-125 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VP0337 07c172729de7c4418b3f06e284fda2eb 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 7.9E-105 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VP0337 07c172729de7c4418b3f06e284fda2eb 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 328 35.598 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VP0337 07c172729de7c4418b3f06e284fda2eb 332 PANTHER PTHR30004 3 331 1.1E-204 T 22-04-2016 VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 261 1.8E-12 T 22-04-2016 VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 SUPERFAMILY SSF47616 164 313 5.01E-36 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 SUPERFAMILY SSF52833 31 150 7.61E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 2.6E-22 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 Gene3D G3DSA:1.20.1050.10 166 275 2.9E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 PIRSF PIRSF015753 5 312 7.9E-135 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 PANTHER PTHR32419 1 315 1.7E-172 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 PANTHER PTHR32419:SF6 1 315 1.7E-172 T 22-04-2016 VP2086 c8f8080fc028cb37b4f07778a88f8d7e 315 Gene3D G3DSA:3.40.30.10 30 165 4.3E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2313 9507c76db0580affc2f7988ceaa7b261 280 PANTHER PTHR13773:SF0 1 280 5.0E-76 T 22-04-2016 VP2313 9507c76db0580affc2f7988ceaa7b261 280 PANTHER PTHR13773 1 280 5.0E-76 T 22-04-2016 VP2313 9507c76db0580affc2f7988ceaa7b261 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 VP2313 9507c76db0580affc2f7988ceaa7b261 280 Pfam PF01148 Cytidylyltransferase family 2 280 3.4E-70 T 22-04-2016 VP0896 5713e652a2071693d61e3772014e56cd 259 Pfam PF01553 Acyltransferase 79 193 3.7E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP0896 5713e652a2071693d61e3772014e56cd 259 SMART SM00563 90 200 2.5E-12 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VP0896 5713e652a2071693d61e3772014e56cd 259 PANTHER PTHR10434 74 186 5.9E-17 T 22-04-2016 VP0896 5713e652a2071693d61e3772014e56cd 259 Gene3D G3DSA:3.40.1130.10 81 253 2.9E-7 T 22-04-2016 VP0896 5713e652a2071693d61e3772014e56cd 259 SUPERFAMILY SSF69593 73 253 6.67E-24 T 22-04-2016 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 PANTHER PTHR30330:SF3 1 444 2.2E-227 T 22-04-2016 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 Pfam PF01235 Sodium:alanine symporter family 54 445 9.7E-138 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 2.6E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 2.6E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 2.6E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 2.6E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 2.6E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.6E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 1.3E-152 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1741 9f450ca04b0e603e7b3903de20d300cd 458 PANTHER PTHR30330 1 444 2.2E-227 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 Pfam PF01389 OmpA-like transmembrane domain 18 170 4.7E-32 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 PANTHER PTHR30128 4 317 3.7E-105 T 22-04-2016 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 PANTHER PTHR30128:SF15 4 317 3.7E-105 T 22-04-2016 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 273 292 2.8E-6 T 22-04-2016 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 293 313 2.8E-6 T 22-04-2016 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 255 272 2.8E-6 T 22-04-2016 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 SUPERFAMILY SSF56925 18 171 2.04E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01021 OMPA domain signature 255 271 8.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01021 OMPA domain signature 240 255 8.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01021 OMPA domain signature 210 232 8.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 Gene3D G3DSA:2.40.160.20 5 189 5.9E-49 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 SUPERFAMILY SSF103088 184 310 9.29E-39 T 22-04-2016 IPR006665 OmpA-like domain VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 Pfam PF00691 OmpA family 210 304 1.6E-25 T 22-04-2016 IPR006665 OmpA-like domain VP0764 4b363f37defa9dc5fb2cf8baf4ca811a 319 Gene3D G3DSA:3.30.1330.60 197 310 2.2E-41 T 22-04-2016 IPR006665 OmpA-like domain VP0196 013b5d580e75040e5d2eea20bfe57df5 238 Gene3D G3DSA:3.90.1200.10 3 45 2.5E-5 T 22-04-2016 VP0196 013b5d580e75040e5d2eea20bfe57df5 238 SUPERFAMILY SSF56112 45 197 1.24E-18 T 22-04-2016 IPR011009 Protein kinase-like domain VP0196 013b5d580e75040e5d2eea20bfe57df5 238 Gene3D G3DSA:1.10.510.10 144 225 9.4E-18 T 22-04-2016 VP0196 013b5d580e75040e5d2eea20bfe57df5 238 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 230 2.2E-66 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 VP0196 013b5d580e75040e5d2eea20bfe57df5 238 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 43.754 T 22-04-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676|UniPathway: UPA00958 VP1494 c3f2b2b3633056e928e21c4db5c01fbc 302 Pfam PF00480 ROK family 2 300 6.9E-74 T 22-04-2016 IPR000600 ROK family VP1494 c3f2b2b3633056e928e21c4db5c01fbc 302 PANTHER PTHR18964 1 301 6.2E-150 T 22-04-2016 VP1494 c3f2b2b3633056e928e21c4db5c01fbc 302 Gene3D G3DSA:3.30.420.40 1 132 1.3E-38 T 22-04-2016 VP1494 c3f2b2b3633056e928e21c4db5c01fbc 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.424 T 22-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 VP1494 c3f2b2b3633056e928e21c4db5c01fbc 302 Gene3D G3DSA:3.30.420.40 133 280 5.6E-43 T 22-04-2016 VP1494 c3f2b2b3633056e928e21c4db5c01fbc 302 PANTHER PTHR18964:SF134 1 301 6.2E-150 T 22-04-2016 VP1494 c3f2b2b3633056e928e21c4db5c01fbc 302 SUPERFAMILY SSF53067 1 300 1.45E-57 T 22-04-2016 VP1494 c3f2b2b3633056e928e21c4db5c01fbc 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family VP1174 be1ce07139744aed44c478ef8e70bc43 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 7.1E-36 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VP1174 be1ce07139744aed44c478ef8e70bc43 77 Pfam PF06667 Phage shock protein B 3 74 3.7E-32 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VP0076 22f8adc194bd03375935d0eeae30559c 141 PIRSF PIRSF006276 1 141 2.1E-53 T 22-04-2016 IPR006015 Universal stress protein A VP0076 22f8adc194bd03375935d0eeae30559c 141 Pfam PF00582 Universal stress protein family 3 138 6.0E-22 T 22-04-2016 IPR006016 UspA GO:0006950 VP0076 22f8adc194bd03375935d0eeae30559c 141 Gene3D G3DSA:3.40.50.620 3 140 1.3E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0076 22f8adc194bd03375935d0eeae30559c 141 SUPERFAMILY SSF52402 3 139 6.2E-34 T 22-04-2016 VP0179 4def730191e3a570ba5d998ccd9f4a42 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 9.4E-73 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP0179 4def730191e3a570ba5d998ccd9f4a42 316 PIRSF PIRSF026649 6 312 1.2E-79 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VP0179 4def730191e3a570ba5d998ccd9f4a42 316 PANTHER PTHR30606 6 310 1.1E-141 T 22-04-2016 VP0179 4def730191e3a570ba5d998ccd9f4a42 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 310 9.1E-135 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VP0179 4def730191e3a570ba5d998ccd9f4a42 316 PANTHER PTHR30606:SF5 6 310 1.1E-141 T 22-04-2016 VP0179 4def730191e3a570ba5d998ccd9f4a42 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 44.101 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VP1160 9f657ac1a0e1a4621841f78ed9ef2748 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 6 55 4.0E-24 T 22-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VP1160 9f657ac1a0e1a4621841f78ed9ef2748 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 5.6E-28 T 22-04-2016 IPR014316 Trimethylamine N-oxide reductase system, TorE VP1072 dbfc88effe297372461c1d880c0a584b 607 SMART SM00487 25 230 1.8E-11 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VP1072 dbfc88effe297372461c1d880c0a584b 607 Gene3D G3DSA:3.40.50.300 24 204 3.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1072 dbfc88effe297372461c1d880c0a584b 607 SUPERFAMILY SSF52540 79 214 2.33E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1072 dbfc88effe297372461c1d880c0a584b 607 SUPERFAMILY SSF52540 283 391 2.33E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1072 dbfc88effe297372461c1d880c0a584b 607 Pfam PF04851 Type III restriction enzyme, res subunit 28 199 4.9E-28 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VP1072 dbfc88effe297372461c1d880c0a584b 607 Gene3D G3DSA:3.40.50.300 284 393 3.7E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1072 dbfc88effe297372461c1d880c0a584b 607 Pfam PF00271 Helicase conserved C-terminal domain 305 392 2.2E-6 T 22-04-2016 IPR001650 Helicase, C-terminal VP0820 40febbb19ce99fa4b1d5753dd045d31e 292 PANTHER PTHR26402:SF483 9 262 6.6E-51 T 22-04-2016 VP0820 40febbb19ce99fa4b1d5753dd045d31e 292 Gene3D G3DSA:1.10.10.10 11 108 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0820 40febbb19ce99fa4b1d5753dd045d31e 292 SUPERFAMILY SSF46894 9 107 1.9E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VP0820 40febbb19ce99fa4b1d5753dd045d31e 292 SMART SM00862 30 107 2.9E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0820 40febbb19ce99fa4b1d5753dd045d31e 292 PANTHER PTHR26402 9 262 6.6E-51 T 22-04-2016 VP0820 40febbb19ce99fa4b1d5753dd045d31e 292 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 1.0E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VP0112 f87bdf8f0036fba1ebc81865313dd326 224 SUPERFAMILY SSF53335 59 211 1.53E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0112 f87bdf8f0036fba1ebc81865313dd326 224 Gene3D G3DSA:3.40.50.150 59 104 4.8E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0112 f87bdf8f0036fba1ebc81865313dd326 224 Gene3D G3DSA:3.40.50.150 105 210 2.5E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP0112 f87bdf8f0036fba1ebc81865313dd326 224 Pfam PF13489 Methyltransferase domain 75 204 1.3E-18 T 22-04-2016 VP0724 51363ff43e561d81f80806e0335ef16f 105 Gene3D G3DSA:3.30.460.10 4 105 1.8E-38 T 22-04-2016 VP0724 51363ff43e561d81f80806e0335ef16f 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.5E-39 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VP0724 51363ff43e561d81f80806e0335ef16f 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.3E-28 T 22-04-2016 VP0724 51363ff43e561d81f80806e0335ef16f 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.401 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VP0724 51363ff43e561d81f80806e0335ef16f 105 SUPERFAMILY SSF81301 5 105 3.6E-38 T 22-04-2016 VP0724 51363ff43e561d81f80806e0335ef16f 105 PANTHER PTHR21043 4 105 1.9E-42 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VP2081 3f97c8832b3f74a36d2f213d785d5f16 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 36.052 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 VP2081 3f97c8832b3f74a36d2f213d785d5f16 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 4.4E-58 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 VP1596 0cafcb1f2facdf6640f00668042accbf 80 SUPERFAMILY SSF52833 1 74 1.71E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1596 0cafcb1f2facdf6640f00668042accbf 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 5.6E-20 T 22-04-2016 IPR008554 Glutaredoxin-like VP1596 0cafcb1f2facdf6640f00668042accbf 80 PANTHER PTHR34386 2 78 5.2E-33 T 22-04-2016 VP1596 0cafcb1f2facdf6640f00668042accbf 80 Gene3D G3DSA:3.40.30.10 2 78 2.2E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1596 0cafcb1f2facdf6640f00668042accbf 80 PANTHER PTHR34386:SF2 2 78 5.2E-33 T 22-04-2016 VP2583 3d1c2d021c066f916cc3eb8d9bd34cff 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 44.185 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VP2583 3d1c2d021c066f916cc3eb8d9bd34cff 322 PANTHER PTHR22602 1 302 1.5E-53 T 22-04-2016 VP2583 3d1c2d021c066f916cc3eb8d9bd34cff 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 3.8E-25 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site VP2583 3d1c2d021c066f916cc3eb8d9bd34cff 322 SUPERFAMILY SSF101790 237 320 5.49E-21 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain VP2583 3d1c2d021c066f916cc3eb8d9bd34cff 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 28 138 1.3E-6 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal VP2583 3d1c2d021c066f916cc3eb8d9bd34cff 322 SUPERFAMILY SSF103025 12 236 1.52E-56 T 22-04-2016 VP2583 3d1c2d021c066f916cc3eb8d9bd34cff 322 Gene3D G3DSA:3.30.70.1400 30 114 2.6E-32 T 22-04-2016 VP2583 3d1c2d021c066f916cc3eb8d9bd34cff 322 PANTHER PTHR22602:SF0 1 302 1.5E-53 T 22-04-2016 VP1269 bcb73cafb185092c92bad295731091ed 226 SUPERFAMILY SSF103039 10 173 3.27E-24 T 22-04-2016 IPR028976 CheC-like domain VP1269 bcb73cafb185092c92bad295731091ed 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 9.9E-118 T 22-04-2016 IPR024513 Protein of unknown function DUF3334 VP1269 bcb73cafb185092c92bad295731091ed 226 Gene3D G3DSA:3.40.1550.10 17 173 3.2E-14 T 22-04-2016 IPR028976 CheC-like domain VP1850 28c61d4bc69004fb541e33cbda7ece63 142 PANTHER PTHR23091:SF236 2 127 2.4E-23 T 22-04-2016 VP1850 28c61d4bc69004fb541e33cbda7ece63 142 PANTHER PTHR23091 2 127 2.4E-23 T 22-04-2016 VP1850 28c61d4bc69004fb541e33cbda7ece63 142 Gene3D G3DSA:3.40.630.30 2 130 3.5E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1850 28c61d4bc69004fb541e33cbda7ece63 142 SUPERFAMILY SSF55729 2 132 6.81E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1850 28c61d4bc69004fb541e33cbda7ece63 142 Pfam PF13673 Acetyltransferase (GNAT) domain 30 130 5.6E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 ProSitePatterns PS01095 Chitinases family 18 active site. 639 647 - T 22-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 SUPERFAMILY SSF51055 17 78 3.14E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 SMART SM00495 279 328 0.024 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 SMART SM00495 28 74 6.4E-10 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 PANTHER PTHR11177:SF195 496 836 1.3E-58 T 22-04-2016 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 Gene3D G3DSA:2.10.10.20 24 77 8.7E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 SUPERFAMILY SSF51445 524 835 6.55E-48 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP2338 ffc093086d2ed1d76645417ec4b2a425 848 Pfam PF02839 Carbohydrate binding domain 29 68 1.2E-9 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 Pfam PF00704 Glycosyl hydrolases family 18 527 827 5.3E-24 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 PANTHER PTHR11177 496 836 1.3E-58 T 22-04-2016 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 SMART SM00636 525 827 2.7E-4 T 22-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 VP2338 ffc093086d2ed1d76645417ec4b2a425 848 Gene3D G3DSA:3.20.20.80 524 836 6.8E-58 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP0936 75ad8aa77982d3a228579ee23644e691 310 PANTHER PTHR30106:SF1 10 309 5.6E-117 T 22-04-2016 VP0936 75ad8aa77982d3a228579ee23644e691 310 PANTHER PTHR30106 10 309 5.6E-117 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VP0936 75ad8aa77982d3a228579ee23644e691 310 Pfam PF03601 Conserved hypothetical protein 698 24 291 5.3E-55 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VPA1116 7e936f01e77a1c051cafffb7db0a345c 40 PANTHER PTHR10742:SF275 1 40 3.0E-16 T 22-04-2016 VPA1116 7e936f01e77a1c051cafffb7db0a345c 40 PANTHER PTHR10742 1 40 3.0E-16 T 22-04-2016 VP1971 1cd2480c7b1e6da41a2398fb2bc39459 131 Gene3D G3DSA:3.10.129.10 8 130 2.6E-41 T 22-04-2016 IPR029069 HotDog domain VP1971 1cd2480c7b1e6da41a2398fb2bc39459 131 PANTHER PTHR11049 1 129 4.9E-66 T 22-04-2016 VP1971 1cd2480c7b1e6da41a2398fb2bc39459 131 PANTHER PTHR11049:SF5 1 129 4.9E-66 T 22-04-2016 VP1971 1cd2480c7b1e6da41a2398fb2bc39459 131 Pfam PF03061 Thioesterase superfamily 26 98 6.2E-20 T 22-04-2016 IPR006683 Thioesterase domain VP1971 1cd2480c7b1e6da41a2398fb2bc39459 131 SUPERFAMILY SSF54637 9 129 4.73E-38 T 22-04-2016 IPR029069 HotDog domain VP0365 37fa9021a67ae6b2931873f9ee9b2be8 211 SMART SM01120 32 206 2.1E-78 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 VP0365 37fa9021a67ae6b2931873f9ee9b2be8 211 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.4E-78 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- VP0365 37fa9021a67ae6b2931873f9ee9b2be8 211 Pfam PF02734 DAK2 domain 33 205 2.7E-54 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 VP0365 37fa9021a67ae6b2931873f9ee9b2be8 211 PANTHER PTHR28629 1 210 8.5E-75 T 22-04-2016 VP0365 37fa9021a67ae6b2931873f9ee9b2be8 211 SUPERFAMILY SSF101473 2 207 7.72E-58 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 VP1501 ab955fd00a14130f0e1ec82045524bec 272 Pfam PF12849 PBP superfamily domain 30 247 1.9E-31 T 22-04-2016 IPR024370 PBP domain VP1501 ab955fd00a14130f0e1ec82045524bec 272 Gene3D G3DSA:3.40.190.10 189 271 1.7E-27 T 22-04-2016 VP1501 ab955fd00a14130f0e1ec82045524bec 272 PANTHER PTHR37945 1 272 1.8E-109 T 22-04-2016 VP1501 ab955fd00a14130f0e1ec82045524bec 272 SUPERFAMILY SSF53850 29 256 1.25E-32 T 22-04-2016 VP1501 ab955fd00a14130f0e1ec82045524bec 272 Gene3D G3DSA:3.40.190.10 11 154 1.8E-46 T 22-04-2016 VP1244 1683a8ac92e13191a4230f7e09bb243e 165 PANTHER PTHR26402 4 129 1.1E-24 T 22-04-2016 VP1244 1683a8ac92e13191a4230f7e09bb243e 165 SMART SM00448 4 125 3.2E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1244 1683a8ac92e13191a4230f7e09bb243e 165 SUPERFAMILY SSF52172 1 142 5.12E-20 T 22-04-2016 IPR011006 CheY-like superfamily VP1244 1683a8ac92e13191a4230f7e09bb243e 165 Pfam PF00072 Response regulator receiver domain 6 125 1.2E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP1244 1683a8ac92e13191a4230f7e09bb243e 165 Gene3D G3DSA:3.40.50.2300 6 130 8.6E-20 T 22-04-2016 VP1244 1683a8ac92e13191a4230f7e09bb243e 165 PANTHER PTHR26402:SF515 4 129 1.1E-24 T 22-04-2016 VP2168 0bad6699369094c51b2de88427e5f69d 559 PANTHER PTHR30221 276 552 1.8E-89 T 22-04-2016 VP2168 0bad6699369094c51b2de88427e5f69d 559 Pfam PF00924 Mechanosensitive ion channel 350 542 2.6E-54 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VP2168 0bad6699369094c51b2de88427e5f69d 559 SUPERFAMILY SSF50182 387 453 2.22E-18 T 22-04-2016 IPR010920 LSM domain VP2168 0bad6699369094c51b2de88427e5f69d 559 Gene3D G3DSA:3.30.70.100 457 540 9.9E-28 T 22-04-2016 VP2168 0bad6699369094c51b2de88427e5f69d 559 SUPERFAMILY SSF82861 300 386 7.19E-14 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VP2168 0bad6699369094c51b2de88427e5f69d 559 Gene3D G3DSA:2.30.30.60 403 452 1.2E-18 T 22-04-2016 VP2168 0bad6699369094c51b2de88427e5f69d 559 SUPERFAMILY SSF82689 456 552 1.57E-31 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VP2168 0bad6699369094c51b2de88427e5f69d 559 PANTHER PTHR30221:SF1 276 552 1.8E-89 T 22-04-2016 VP0513 e5470068de90117a27c6102da04960cf 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 2.1E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VP0513 e5470068de90117a27c6102da04960cf 505 SUPERFAMILY SSF50249 12 149 1.69E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0513 e5470068de90117a27c6102da04960cf 505 Gene3D G3DSA:3.30.930.10 151 500 4.6E-120 T 22-04-2016 VP0513 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VP0513 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VP0513 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VP0513 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VP0513 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VP0513 e5470068de90117a27c6102da04960cf 505 Gene3D G3DSA:2.40.50.140 14 148 4.3E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0513 e5470068de90117a27c6102da04960cf 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.154 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VP0513 e5470068de90117a27c6102da04960cf 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 3.0E-80 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0513 e5470068de90117a27c6102da04960cf 505 SUPERFAMILY SSF55681 156 502 2.3E-118 T 22-04-2016 VP0513 e5470068de90117a27c6102da04960cf 505 PANTHER PTHR22594:SF4 3 504 1.9E-262 T 22-04-2016 VP0513 e5470068de90117a27c6102da04960cf 505 PANTHER PTHR22594 3 504 1.9E-262 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VP0513 e5470068de90117a27c6102da04960cf 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 2.2E-200 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VP2649 df8469453b83cfb3d95c358b0303ff13 266 SUPERFAMILY SSF49785 2 149 2.72E-17 T 22-04-2016 IPR008979 Galactose-binding domain-like VP2649 df8469453b83cfb3d95c358b0303ff13 266 Gene3D G3DSA:2.60.120.260 43 127 6.2E-6 T 22-04-2016 IPR008979 Galactose-binding domain-like VPA0201 2a711d6ab1c209ce7b6e93d03d996f4d 194 Pfam PF05686 Glycosyl transferase family 90 97 192 7.3E-5 T 22-04-2016 IPR006598 Lipopolysaccharide-modifying protein VP1011 58a4c36945b7bc3a0276f18704badbad 741 PIRSF PIRSF009407 1 741 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VP1011 58a4c36945b7bc3a0276f18704badbad 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VP1011 58a4c36945b7bc3a0276f18704badbad 741 SUPERFAMILY SSF53659 5 740 0.0 T 22-04-2016 VP1011 58a4c36945b7bc3a0276f18704badbad 741 PANTHER PTHR36999 2 741 0.0 T 22-04-2016 VP1011 58a4c36945b7bc3a0276f18704badbad 741 Gene3D G3DSA:3.40.718.10 341 364 2.2E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VP1011 58a4c36945b7bc3a0276f18704badbad 741 Gene3D G3DSA:3.40.718.10 540 647 2.2E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VP1011 58a4c36945b7bc3a0276f18704badbad 741 Gene3D G3DSA:3.40.718.10 188 289 2.2E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VP1011 58a4c36945b7bc3a0276f18704badbad 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 Gene3D G3DSA:3.40.50.620 340 461 7.2E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 SUPERFAMILY SSF53613 12 302 1.39E-60 T 22-04-2016 IPR029056 Ribokinase-like VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 Pfam PF01467 Cytidylyltransferase-like 345 468 1.0E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.1E-61 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 6.8E-127 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 PANTHER PTHR10584 1 340 2.7E-144 T 22-04-2016 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.015 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 2.7E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 Gene3D G3DSA:3.40.1190.20 13 309 8.8E-69 T 22-04-2016 IPR029056 Ribokinase-like VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 PANTHER PTHR10584:SF159 1 340 2.7E-144 T 22-04-2016 VP0424 f4f15c3ad418d2dc231bc9a7fcb26421 476 SUPERFAMILY SSF52374 340 471 3.66E-23 T 22-04-2016 VP0721 59058841b048ab62cccd5d80935ae505 373 Pfam PF01098 Cell cycle protein 23 367 1.9E-113 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VP0721 59058841b048ab62cccd5d80935ae505 373 PANTHER PTHR30474 1 371 3.0E-175 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VP0721 59058841b048ab62cccd5d80935ae505 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VP0721 59058841b048ab62cccd5d80935ae505 373 PANTHER PTHR30474:SF1 1 371 3.0E-175 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VP0721 59058841b048ab62cccd5d80935ae505 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 4.1E-135 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VP0032 8dd2022c7fbbf861daf16c0e3f1e297a 485 Pfam PF02386 Cation transport protein 39 477 4.8E-90 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VP0032 8dd2022c7fbbf861daf16c0e3f1e297a 485 PANTHER PTHR32024:SF2 1 484 2.2E-267 T 22-04-2016 VP0032 8dd2022c7fbbf861daf16c0e3f1e297a 485 PIRSF PIRSF006247 1 485 1.1E-175 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VP0032 8dd2022c7fbbf861daf16c0e3f1e297a 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 9.6E-118 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VP0032 8dd2022c7fbbf861daf16c0e3f1e297a 485 PANTHER PTHR32024 1 484 2.2E-267 T 22-04-2016 VP0689 4135665ad58361fc45e960483aa499ad 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 7.1E-22 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VP0689 4135665ad58361fc45e960483aa499ad 253 PANTHER PTHR30433 2 253 1.6E-126 T 22-04-2016 VP0689 4135665ad58361fc45e960483aa499ad 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site VP0689 4135665ad58361fc45e960483aa499ad 253 PANTHER PTHR30433:SF2 2 253 1.6E-126 T 22-04-2016 IPR022522 Flagellar motor stator, MotA VP0891 5f9d24d9c0016e173eb81a6047a0f373 122 Gene3D G3DSA:3.10.129.10 13 110 3.8E-12 T 22-04-2016 IPR029069 HotDog domain VP0891 5f9d24d9c0016e173eb81a6047a0f373 122 SUPERFAMILY SSF54637 12 108 6.53E-16 T 22-04-2016 IPR029069 HotDog domain VP0891 5f9d24d9c0016e173eb81a6047a0f373 122 PIRSF PIRSF030962 1 122 2.3E-49 T 22-04-2016 IPR016962 Dehydrase, ECs4332, predicted VP0399 2398345385ccac5060096c804b4b955c 54 SUPERFAMILY SSF46955 1 53 4.21E-12 T 22-04-2016 IPR009061 Putative DNA-binding domain VP0399 2398345385ccac5060096c804b4b955c 54 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 2 50 6.3E-10 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VP0399 2398345385ccac5060096c804b4b955c 54 Gene3D G3DSA:1.10.10.10 1 54 1.1E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1729 deca988b98f45056a7c4fa4c820d4a63 203 Pfam PF12261 Thermostable hemolysin 18 188 1.1E-60 T 22-04-2016 IPR022050 Thermostable hemolysin VP1302 62304b3214d653e55281c165daeddf6d 457 SUPERFAMILY SSF118215 29 441 1.28E-91 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 7.8E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 7.8E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 7.8E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 7.8E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 7.8E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 7.8E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 7.8E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PANTHER PTHR11958:SF5 1 454 3.7E-237 T 22-04-2016 VP1302 62304b3214d653e55281c165daeddf6d 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 3.5E-98 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 Gene3D G3DSA:1.10.3860.10 22 445 2.6E-95 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1302 62304b3214d653e55281c165daeddf6d 457 PANTHER PTHR11958 1 454 3.7E-237 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VP1353 c9e65482654ae08bab469e813bca030d 219 Gene3D G3DSA:3.30.65.10 174 212 4.8E-5 T 22-04-2016 VP1353 c9e65482654ae08bab469e813bca030d 219 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 1.8E-34 T 22-04-2016 IPR024402 Domain of unknown function DUF2726 VP1353 c9e65482654ae08bab469e813bca030d 219 PIRSF PIRSF028063 1 219 2.9E-142 T 22-04-2016 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VP1656 7f850d2f22510fb1087be6b0318846bb 334 Pfam PF05844 YopD protein 89 331 3.2E-37 T 22-04-2016 IPR008898 YopD-like VP2982 cdb0aa42b93b85631295d72d62c004b6 234 PANTHER PTHR38765 1 226 9.9E-74 T 22-04-2016 VP2982 cdb0aa42b93b85631295d72d62c004b6 234 Pfam PF04340 Protein of unknown function, DUF484 6 216 5.2E-68 T 22-04-2016 IPR007435 Protein of unknown function DUF484 VP2220 158458de1e28522ef6a72799e03c72e8 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 1.0E-16 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VP2220 158458de1e28522ef6a72799e03c72e8 68 PANTHER PTHR37531 1 68 6.3E-24 T 22-04-2016 VP2220 158458de1e28522ef6a72799e03c72e8 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 3.8E-20 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VP2220 158458de1e28522ef6a72799e03c72e8 68 PANTHER PTHR37531:SF1 1 68 6.3E-24 T 22-04-2016 VP0493 6bd12ae2c435296be2ce9de513639f31 159 SUPERFAMILY SSF56935 32 153 1.83E-6 T 22-04-2016 VP0493 6bd12ae2c435296be2ce9de513639f31 159 Gene3D G3DSA:2.40.160.20 45 159 5.9E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0493 6bd12ae2c435296be2ce9de513639f31 159 PIRSF PIRSF028680 3 159 5.0E-80 T 22-04-2016 IPR016895 Uncharacterised conserved protein UCP028680 VP1787 075d5337c4af5a0bcab8a5ad7d1269d6 283 Pfam PF00665 Integrase core domain 121 234 7.4E-33 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VP1787 075d5337c4af5a0bcab8a5ad7d1269d6 283 SUPERFAMILY SSF53098 121 282 2.88E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1787 075d5337c4af5a0bcab8a5ad7d1269d6 283 Gene3D G3DSA:3.30.420.10 116 274 2.7E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VP1787 075d5337c4af5a0bcab8a5ad7d1269d6 283 PANTHER PTHR32552:SF34 8 282 1.6E-109 T 22-04-2016 VP1787 075d5337c4af5a0bcab8a5ad7d1269d6 283 PANTHER PTHR32552 8 282 1.6E-109 T 22-04-2016 VP1787 075d5337c4af5a0bcab8a5ad7d1269d6 283 Pfam PF13276 HTH-like domain 42 96 1.8E-9 T 22-04-2016 IPR025948 HTH-like domain VP1782 941ed5c0097d6cbc423758473f9f3bf3 494 Pfam PF03553 Na+/H+ antiporter family 226 494 2.2E-29 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VP1782 941ed5c0097d6cbc423758473f9f3bf3 494 PANTHER PTHR33451:SF7 47 494 3.6E-109 T 22-04-2016 VP1782 941ed5c0097d6cbc423758473f9f3bf3 494 PANTHER PTHR33451 47 494 3.6E-109 T 22-04-2016 VP2708 26480db3363d7898eecfd3ebff27efb1 669 Pfam PF00563 EAL domain 406 637 7.2E-53 T 22-04-2016 IPR001633 EAL domain VP2708 26480db3363d7898eecfd3ebff27efb1 669 SUPERFAMILY SSF55073 233 386 5.57E-19 T 22-04-2016 IPR029787 Nucleotide cyclase VP2708 26480db3363d7898eecfd3ebff27efb1 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 382 4.4E-10 T 22-04-2016 IPR000160 GGDEF domain VP2708 26480db3363d7898eecfd3ebff27efb1 669 PANTHER PTHR33121 365 637 4.3E-23 T 22-04-2016 VP2708 26480db3363d7898eecfd3ebff27efb1 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 7.3E-28 T 22-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VP2708 26480db3363d7898eecfd3ebff27efb1 669 SMART SM00267 216 386 5.3E-10 T 22-04-2016 IPR000160 GGDEF domain VP2708 26480db3363d7898eecfd3ebff27efb1 669 PANTHER PTHR33121:SF10 365 637 4.3E-23 T 22-04-2016 VP2708 26480db3363d7898eecfd3ebff27efb1 669 Gene3D G3DSA:3.30.70.270 230 388 4.5E-21 T 22-04-2016 VP2708 26480db3363d7898eecfd3ebff27efb1 669 Gene3D G3DSA:3.20.20.450 400 638 2.3E-40 T 22-04-2016 IPR001633 EAL domain VP2708 26480db3363d7898eecfd3ebff27efb1 669 SMART SM00052 397 651 1.6E-17 T 22-04-2016 IPR001633 EAL domain VP2708 26480db3363d7898eecfd3ebff27efb1 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 4.8E-20 T 22-04-2016 IPR000160 GGDEF domain VP2708 26480db3363d7898eecfd3ebff27efb1 669 SUPERFAMILY SSF141868 406 638 6.93E-38 T 22-04-2016 IPR001633 EAL domain VP2480 b430ca90142eb20b1b9d575ec3878c06 328 Gene3D G3DSA:1.10.3720.10 93 321 3.7E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2480 b430ca90142eb20b1b9d575ec3878c06 328 PANTHER PTHR30465:SF24 1 325 1.4E-112 T 22-04-2016 VP2480 b430ca90142eb20b1b9d575ec3878c06 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 325 1.6E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2480 b430ca90142eb20b1b9d575ec3878c06 328 SUPERFAMILY SSF161098 93 324 2.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2480 b430ca90142eb20b1b9d575ec3878c06 328 PANTHER PTHR30465 1 325 1.4E-112 T 22-04-2016 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.121 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 SUPERFAMILY SSF51735 16 190 3.38E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PANTHER PTHR11728:SF1 3 343 1.6E-135 T 22-04-2016 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 SUPERFAMILY SSF48179 191 343 3.17E-56 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 Gene3D G3DSA:1.10.1040.10 196 338 2.8E-58 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 5.2E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PANTHER PTHR11728 3 343 1.6E-135 T 22-04-2016 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 PIRSF PIRSF000114 10 344 2.3E-95 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 9.8E-47 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VP2832 23aaedcabe3604b9beea2f0bd36fb5a1 345 Gene3D G3DSA:3.40.50.720 8 195 7.4E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0186 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0186 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0186 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VP0186 e4bb6030cdb6c1393052a1629f342086 56 PANTHER PTHR15238 1 56 1.4E-24 T 22-04-2016 VP0186 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0186 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP1693 3d9f2b1cf7a2ea7a894ceb815217c11d 119 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 3.4E-52 T 22-04-2016 IPR013348 Type III secretion system YscG GO:0009405 VP1693 3d9f2b1cf7a2ea7a894ceb815217c11d 119 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 1.4E-53 T 22-04-2016 IPR013348 Type III secretion system YscG GO:0009405 VP0771 4a2705071e74fb651f623d58041ecd63 105 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 98 1.1E-23 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VP0771 4a2705071e74fb651f623d58041ecd63 105 SUPERFAMILY SSF101498 2 98 2.48E-21 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VP0771 4a2705071e74fb651f623d58041ecd63 105 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 1.0E-17 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VP2054 1b15884f994872b7d112914347c69fca 244 PANTHER PTHR24322:SF635 151 183 5.9E-75 T 22-04-2016 VP2054 1b15884f994872b7d112914347c69fca 244 PANTHER PTHR24322:SF635 10 135 5.9E-75 T 22-04-2016 VP2054 1b15884f994872b7d112914347c69fca 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VP2054 1b15884f994872b7d112914347c69fca 244 Gene3D G3DSA:3.40.50.720 1 243 9.9E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2054 1b15884f994872b7d112914347c69fca 244 SUPERFAMILY SSF51735 4 243 7.21E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2054 1b15884f994872b7d112914347c69fca 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 3.7E-5 T 22-04-2016 VP2054 1b15884f994872b7d112914347c69fca 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 5.9E-100 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VP2054 1b15884f994872b7d112914347c69fca 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 8.6E-67 T 22-04-2016 VP2054 1b15884f994872b7d112914347c69fca 244 PANTHER PTHR24322 151 183 5.9E-75 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PANTHER PTHR24322 10 135 5.9E-75 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP2054 1b15884f994872b7d112914347c69fca 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP1714 4c0808c0f34f32a88a9d76a9f1c3620b 326 Pfam PF13437 HlyD family secretion protein 208 312 8.7E-7 T 22-04-2016 VP1714 4c0808c0f34f32a88a9d76a9f1c3620b 326 SUPERFAMILY SSF111369 43 120 1.44E-8 T 22-04-2016 VP1714 4c0808c0f34f32a88a9d76a9f1c3620b 326 PANTHER PTHR30438:SF1 9 326 5.3E-122 T 22-04-2016 VP1714 4c0808c0f34f32a88a9d76a9f1c3620b 326 PANTHER PTHR30438 9 326 5.3E-122 T 22-04-2016 VP1714 4c0808c0f34f32a88a9d76a9f1c3620b 326 Pfam PF13533 Biotin-lipoyl like 47 91 2.5E-12 T 22-04-2016 VP1714 4c0808c0f34f32a88a9d76a9f1c3620b 326 Gene3D G3DSA:2.40.50.100 205 238 3.6E-13 T 22-04-2016 VP1714 4c0808c0f34f32a88a9d76a9f1c3620b 326 Gene3D G3DSA:2.40.50.100 44 78 3.6E-13 T 22-04-2016 VP0944 d4d6c226666279ba575388a3d08c7c4b 191 SUPERFAMILY SSF56925 31 191 2.88E-13 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0944 d4d6c226666279ba575388a3d08c7c4b 191 Gene3D G3DSA:2.40.160.20 13 167 1.0E-15 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0944 d4d6c226666279ba575388a3d08c7c4b 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 1.4E-21 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VP1352 73cfc812497c6de14bfd253c30126d21 222 PANTHER PTHR11260 1 221 2.5E-96 T 22-04-2016 VP1352 73cfc812497c6de14bfd253c30126d21 222 Gene3D G3DSA:1.20.1050.10 89 221 1.6E-48 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VP1352 73cfc812497c6de14bfd253c30126d21 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 3.3E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VP1352 73cfc812497c6de14bfd253c30126d21 222 PANTHER PTHR11260:SF289 1 221 2.5E-96 T 22-04-2016 VP1352 73cfc812497c6de14bfd253c30126d21 222 SUPERFAMILY SSF52833 5 89 3.01E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1352 73cfc812497c6de14bfd253c30126d21 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 2.4E-82 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 VP1352 73cfc812497c6de14bfd253c30126d21 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 207 1.1E-4 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal VP1352 73cfc812497c6de14bfd253c30126d21 222 Gene3D G3DSA:3.40.30.10 7 84 4.5E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold VP1352 73cfc812497c6de14bfd253c30126d21 222 SUPERFAMILY SSF47616 88 220 1.89E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VP2596 c68c5674e6d0a01793a13b3ca6b442df 209 PANTHER PTHR30086:SF0 1 209 2.7E-92 T 22-04-2016 VP2596 c68c5674e6d0a01793a13b3ca6b442df 209 Pfam PF01810 LysE type translocator 15 202 1.0E-43 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP2596 c68c5674e6d0a01793a13b3ca6b442df 209 PANTHER PTHR30086 1 209 2.7E-92 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP1761 6526a810b02be7f6acef054664cc3385 151 PANTHER PTHR28026 1 150 2.8E-38 T 22-04-2016 VP1761 6526a810b02be7f6acef054664cc3385 151 PANTHER PTHR28026:SF3 1 150 2.8E-38 T 22-04-2016 VP1761 6526a810b02be7f6acef054664cc3385 151 Pfam PF06127 Protein of unknown function (DUF962) 8 149 4.8E-20 T 22-04-2016 IPR009305 Protein of unknown function DUF962 VP2400 174f6841e9161a2e060413b38131f910 339 Gene3D G3DSA:3.90.25.10 180 232 1.1E-54 T 22-04-2016 VP2400 174f6841e9161a2e060413b38131f910 339 Gene3D G3DSA:3.90.25.10 264 337 1.1E-54 T 22-04-2016 VP2400 174f6841e9161a2e060413b38131f910 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.8E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2400 174f6841e9161a2e060413b38131f910 339 PANTHER PTHR10366 2 338 4.3E-155 T 22-04-2016 VP2400 174f6841e9161a2e060413b38131f910 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 9.5E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VP2400 174f6841e9161a2e060413b38131f910 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 9.5E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VP2400 174f6841e9161a2e060413b38131f910 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 9.5E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VP2400 174f6841e9161a2e060413b38131f910 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.9E-139 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 VP2400 174f6841e9161a2e060413b38131f910 339 Gene3D G3DSA:3.40.50.720 2 179 2.0E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2400 174f6841e9161a2e060413b38131f910 339 SUPERFAMILY SSF51735 2 336 2.38E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2400 174f6841e9161a2e060413b38131f910 339 PANTHER PTHR10366:SF39 2 338 4.3E-155 T 22-04-2016 VP1063 a0e62b0fd5240f038cd905719080c566 353 SUPERFAMILY SSF142754 29 341 1.96E-105 T 22-04-2016 VP1063 a0e62b0fd5240f038cd905719080c566 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.463 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VP1063 a0e62b0fd5240f038cd905719080c566 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 6.3E-101 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VP1063 a0e62b0fd5240f038cd905719080c566 353 PANTHER PTHR30573 1 352 4.5E-164 T 22-04-2016 VP1063 a0e62b0fd5240f038cd905719080c566 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 3.4E-114 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VP2368 4ac0f9589d8fb10a18eea8f5ffc66943 269 Gene3D G3DSA:3.40.50.720 5 267 6.0E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2368 4ac0f9589d8fb10a18eea8f5ffc66943 269 PANTHER PTHR10953 201 266 4.6E-140 T 22-04-2016 VP2368 4ac0f9589d8fb10a18eea8f5ffc66943 269 PANTHER PTHR10953 13 168 4.6E-140 T 22-04-2016 VP2368 4ac0f9589d8fb10a18eea8f5ffc66943 269 SUPERFAMILY SSF69572 9 267 5.76E-64 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VP2368 4ac0f9589d8fb10a18eea8f5ffc66943 269 Pfam PF00899 ThiF family 24 195 5.3E-38 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VP2368 4ac0f9589d8fb10a18eea8f5ffc66943 269 PANTHER PTHR10953:SF159 201 266 4.6E-140 T 22-04-2016 VP2368 4ac0f9589d8fb10a18eea8f5ffc66943 269 PANTHER PTHR10953:SF159 13 168 4.6E-140 T 22-04-2016 VP1436 bb80d32114aa9dc70c54b66c6f6496b6 242 Gene3D G3DSA:1.10.340.30 55 186 1.0E-25 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VP1436 bb80d32114aa9dc70c54b66c6f6496b6 242 PANTHER PTHR30037 190 222 2.4E-73 T 22-04-2016 VP1436 bb80d32114aa9dc70c54b66c6f6496b6 242 PANTHER PTHR30037 15 172 2.4E-73 T 22-04-2016 VP1436 bb80d32114aa9dc70c54b66c6f6496b6 242 Pfam PF03352 Methyladenine glycosylase 60 153 4.8E-15 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VP1436 bb80d32114aa9dc70c54b66c6f6496b6 242 SUPERFAMILY SSF48150 53 198 4.71E-40 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VP1436 bb80d32114aa9dc70c54b66c6f6496b6 242 PANTHER PTHR30037:SF3 190 222 2.4E-73 T 22-04-2016 VP1436 bb80d32114aa9dc70c54b66c6f6496b6 242 PANTHER PTHR30037:SF3 15 172 2.4E-73 T 22-04-2016 VP1427 83896afbce17eca8e977df095ce6f58f 374 Gene3D G3DSA:3.30.450.40 13 152 8.2E-5 T 22-04-2016 IPR029016 GAF domain-like VP1427 83896afbce17eca8e977df095ce6f58f 374 Gene3D G3DSA:1.10.3210.10 295 323 4.1E-7 T 22-04-2016 IPR006674 HD domain VP1427 83896afbce17eca8e977df095ce6f58f 374 Gene3D G3DSA:1.10.3210.10 157 262 4.1E-7 T 22-04-2016 IPR006674 HD domain VP1427 83896afbce17eca8e977df095ce6f58f 374 SUPERFAMILY SSF109604 170 352 2.01E-13 T 22-04-2016 VP1427 83896afbce17eca8e977df095ce6f58f 374 Pfam PF13487 HD domain 249 304 2.3E-9 T 22-04-2016 VP1427 83896afbce17eca8e977df095ce6f58f 374 SUPERFAMILY SSF55781 13 138 6.67E-6 T 22-04-2016 IPR029016 GAF domain-like VP2160 9fa077837604c41abfec235ab9b42149 278 Gene3D G3DSA:3.40.50.150 74 264 3.3E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2160 9fa077837604c41abfec235ab9b42149 278 SUPERFAMILY SSF53335 4 258 7.38E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2160 9fa077837604c41abfec235ab9b42149 278 PANTHER PTHR10108 16 275 1.4E-43 T 22-04-2016 VP2160 9fa077837604c41abfec235ab9b42149 278 PIRSF PIRSF018249 1 274 4.7E-88 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VP2160 9fa077837604c41abfec235ab9b42149 278 PANTHER PTHR10108:SF886 16 275 1.4E-43 T 22-04-2016 VP2160 9fa077837604c41abfec235ab9b42149 278 Pfam PF13847 Methyltransferase domain 87 211 4.4E-16 T 22-04-2016 IPR025714 Methyltransferase domain VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.974 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 8.1E-64 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 Gene3D G3DSA:3.90.226.10 57 274 3.1E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 SUPERFAMILY SSF52096 5 318 2.87E-106 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 5.3E-165 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VP2302 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PANTHER PTHR22855 1 317 1.6E-131 T 22-04-2016 VP0626 4d9226790f6d786c893e973e2e84312b 378 SUPERFAMILY SSF53474 37 218 3.52E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0626 4d9226790f6d786c893e973e2e84312b 378 Gene3D G3DSA:3.40.50.1820 54 219 8.4E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0626 4d9226790f6d786c893e973e2e84312b 378 Pfam PF01764 Lipase (class 3) 73 203 4.8E-22 T 22-04-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: REACT_14797|Reactome: REACT_604 VP0626 4d9226790f6d786c893e973e2e84312b 378 PANTHER PTHR21493 350 361 1.8E-19 T 22-04-2016 VP0626 4d9226790f6d786c893e973e2e84312b 378 PANTHER PTHR21493 69 202 1.8E-19 T 22-04-2016 VP0398 c18a960dd369fdc9540551d97c0e475b 385 Gene3D G3DSA:1.10.10.60 358 380 4.6E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 SMART SM00528 88 135 6.4E-26 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 Pfam PF00816 H-NS histone family 32 129 6.3E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 Gene3D G3DSA:1.10.287.1050 1 58 1.0E-17 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 PANTHER PTHR38097 2 135 2.7E-63 T 22-04-2016 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 SUPERFAMILY SSF81273 2 58 1.0E-16 T 22-04-2016 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 SUPERFAMILY SSF81273 93 135 2.12E-12 T 22-04-2016 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 PANTHER PTHR38097:SF2 2 135 2.7E-63 T 22-04-2016 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 Gene3D G3DSA:4.10.430.10 92 135 7.7E-27 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VP1133 bdd61b49b2eec451e7dff55d5ef28f57 135 PIRSF PIRSF002096 1 135 1.9E-55 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VP0954 6ef4acb0b0a1451b8572e5e2b0063dd1 244 SUPERFAMILY SSF75217 94 243 3.53E-34 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VP0954 6ef4acb0b0a1451b8572e5e2b0063dd1 244 Gene3D G3DSA:3.40.1280.10 95 243 4.0E-38 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VP0954 6ef4acb0b0a1451b8572e5e2b0063dd1 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.9E-29 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VP0954 6ef4acb0b0a1451b8572e5e2b0063dd1 244 PANTHER PTHR12029 3 243 9.7E-45 T 22-04-2016 VP0954 6ef4acb0b0a1451b8572e5e2b0063dd1 244 Gene3D G3DSA:3.30.1330.30 1 93 5.3E-26 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VP0954 6ef4acb0b0a1451b8572e5e2b0063dd1 244 SUPERFAMILY SSF55315 4 93 6.12E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VP0419 04dfceee36ca7cfbc3f84365d17eca1a 228 SUPERFAMILY SSF109755 31 218 1.24E-15 T 22-04-2016 VP0419 04dfceee36ca7cfbc3f84365d17eca1a 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 4.2E-67 T 22-04-2016 IPR002727 Protein of unknown function DUF47 VP0419 04dfceee36ca7cfbc3f84365d17eca1a 228 PANTHER PTHR36536:SF3 3 228 2.8E-137 T 22-04-2016 VP0419 04dfceee36ca7cfbc3f84365d17eca1a 228 PANTHER PTHR36536 3 228 2.8E-137 T 22-04-2016 VP0419 04dfceee36ca7cfbc3f84365d17eca1a 228 Pfam PF01865 Protein of unknown function DUF47 9 225 2.0E-65 T 22-04-2016 IPR018445 Putative phosphate transport regulator VP1956 7913d538245bce7dcc718e69203aa712 525 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 8.8E-14 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1956 7913d538245bce7dcc718e69203aa712 525 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 9.0E-223 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1956 7913d538245bce7dcc718e69203aa712 525 PRINTS PR00095 Anthranilate synthase component I signature 463 477 5.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1956 7913d538245bce7dcc718e69203aa712 525 PRINTS PR00095 Anthranilate synthase component I signature 448 462 5.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1956 7913d538245bce7dcc718e69203aa712 525 PRINTS PR00095 Anthranilate synthase component I signature 368 381 5.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1956 7913d538245bce7dcc718e69203aa712 525 PRINTS PR00095 Anthranilate synthase component I signature 354 367 5.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1956 7913d538245bce7dcc718e69203aa712 525 Pfam PF00425 chorismate binding enzyme 247 506 5.0E-85 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VP1956 7913d538245bce7dcc718e69203aa712 525 PANTHER PTHR11236 13 521 4.0E-248 T 22-04-2016 VP1956 7913d538245bce7dcc718e69203aa712 525 SUPERFAMILY SSF56322 14 517 6.67E-159 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VP1956 7913d538245bce7dcc718e69203aa712 525 PANTHER PTHR11236:SF22 13 521 4.0E-248 T 22-04-2016 VP1956 7913d538245bce7dcc718e69203aa712 525 PIRSF PIRSF001373 3 525 1.3E-262 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VP1956 7913d538245bce7dcc718e69203aa712 525 Gene3D G3DSA:3.60.120.10 13 518 1.8E-158 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VP2539 7aa46397640ac4fc11639b2d03a3ecdc 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 516 3.1E-208 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VP2539 7aa46397640ac4fc11639b2d03a3ecdc 522 PANTHER PTHR38761 1 522 2.8E-264 T 22-04-2016 VP2539 7aa46397640ac4fc11639b2d03a3ecdc 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 222.08 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VP2539 7aa46397640ac4fc11639b2d03a3ecdc 522 SUPERFAMILY SSF55931 6 513 1.57E-199 T 22-04-2016 VP2539 7aa46397640ac4fc11639b2d03a3ecdc 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 8.0E-168 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VP1380 12f4aeb86e8bd516a131c7f071c35bbd 531 SUPERFAMILY SSF51998 43 486 2.56E-96 T 22-04-2016 VP1380 12f4aeb86e8bd516a131c7f071c35bbd 531 Pfam PF11230 Protein of unknown function (DUF3029) 39 520 7.5E-231 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VP1380 12f4aeb86e8bd516a131c7f071c35bbd 531 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 29 520 5.4E-231 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VP1380 12f4aeb86e8bd516a131c7f071c35bbd 531 PIRSF PIRSF028991 23 531 2.4E-293 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VP1380 12f4aeb86e8bd516a131c7f071c35bbd 531 Gene3D G3DSA:3.20.70.20 105 266 8.0E-14 T 22-04-2016 VP2973 39244b493cadc6439292df864b3b9288 205 PANTHER PTHR30086 1 204 3.3E-97 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP2973 39244b493cadc6439292df864b3b9288 205 Pfam PF01810 LysE type translocator 15 202 7.3E-35 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP2973 39244b493cadc6439292df864b3b9288 205 PIRSF PIRSF006324 1 205 6.4E-56 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VP2973 39244b493cadc6439292df864b3b9288 205 PANTHER PTHR30086:SF14 1 204 3.3E-97 T 22-04-2016 VP1025 6fd2dd638709ef65c48f3de9459a0589 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP1025 6fd2dd638709ef65c48f3de9459a0589 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP1025 6fd2dd638709ef65c48f3de9459a0589 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VP1025 6fd2dd638709ef65c48f3de9459a0589 267 PANTHER PTHR10992 157 262 5.7E-41 T 22-04-2016 VP1025 6fd2dd638709ef65c48f3de9459a0589 267 PANTHER PTHR10992 16 133 5.7E-41 T 22-04-2016 VP1025 6fd2dd638709ef65c48f3de9459a0589 267 SUPERFAMILY SSF53474 15 260 1.37E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP1025 6fd2dd638709ef65c48f3de9459a0589 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 8.2E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VP1025 6fd2dd638709ef65c48f3de9459a0589 267 Gene3D G3DSA:3.40.50.1820 14 261 2.5E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP0211 95d0cdd41c8f418342b79471f583f5ae 423 Pfam PF00534 Glycosyl transferases group 1 247 403 2.2E-7 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VP0211 95d0cdd41c8f418342b79471f583f5ae 423 SUPERFAMILY SSF53756 53 412 2.7E-17 T 22-04-2016 VP0211 95d0cdd41c8f418342b79471f583f5ae 423 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 1.9E-62 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 VP0211 95d0cdd41c8f418342b79471f583f5ae 423 PANTHER PTHR23417 1 112 9.5E-112 T 22-04-2016 VP0211 95d0cdd41c8f418342b79471f583f5ae 423 PANTHER PTHR23417 191 420 9.5E-112 T 22-04-2016 VP0211 95d0cdd41c8f418342b79471f583f5ae 423 PANTHER PTHR23417 131 141 9.5E-112 T 22-04-2016 VP0211 95d0cdd41c8f418342b79471f583f5ae 423 PANTHER PTHR23417:SF2 1 112 9.5E-112 T 22-04-2016 VP0211 95d0cdd41c8f418342b79471f583f5ae 423 PANTHER PTHR23417:SF2 191 420 9.5E-112 T 22-04-2016 VP0211 95d0cdd41c8f418342b79471f583f5ae 423 PANTHER PTHR23417:SF2 131 141 9.5E-112 T 22-04-2016 VPA1709 6e91c168680afbb89ac15a6977c08189 183 Pfam PF12698 ABC-2 family transporter protein 2 178 6.7E-26 T 22-04-2016 VPA1709 6e91c168680afbb89ac15a6977c08189 183 PANTHER PTHR30294:SF19 1 182 4.1E-53 T 22-04-2016 VPA1709 6e91c168680afbb89ac15a6977c08189 183 PANTHER PTHR30294 1 182 4.1E-53 T 22-04-2016 VP0217 c638f2ba81c99f8a7034d80110c35b76 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 25 219 2.1E-57 T 22-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VP0217 c638f2ba81c99f8a7034d80110c35b76 225 Gene3D G3DSA:2.40.360.10 26 224 6.7E-67 T 22-04-2016 IPR023373 YmcC-like domain VP0217 c638f2ba81c99f8a7034d80110c35b76 225 SUPERFAMILY SSF159270 28 223 9.68E-57 T 22-04-2016 IPR023373 YmcC-like domain VP1797 0cea50232551ee305a54d4faf929565e 123 PANTHER PTHR11803 1 123 6.5E-25 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VP1797 0cea50232551ee305a54d4faf929565e 123 SUPERFAMILY SSF55298 4 123 8.17E-29 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VP1797 0cea50232551ee305a54d4faf929565e 123 Pfam PF01042 Endoribonuclease L-PSP 11 122 8.3E-24 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VP1797 0cea50232551ee305a54d4faf929565e 123 Gene3D G3DSA:3.30.1330.40 3 123 1.5E-32 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VP2834 13aed6af56a594390626c85bc0b08f6a 368 PANTHER PTHR21666 22 368 5.8E-88 T 22-04-2016 VP2834 13aed6af56a594390626c85bc0b08f6a 368 PANTHER PTHR21666:SF213 22 368 5.8E-88 T 22-04-2016 VP2834 13aed6af56a594390626c85bc0b08f6a 368 SUPERFAMILY SSF51261 135 366 4.5E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif VP2834 13aed6af56a594390626c85bc0b08f6a 368 Gene3D G3DSA:2.70.70.10 227 367 1.1E-34 T 22-04-2016 VP2834 13aed6af56a594390626c85bc0b08f6a 368 Pfam PF01551 Peptidase family M23 269 362 1.1E-24 T 22-04-2016 IPR016047 Peptidase M23 VP1753 060079bff5eb0d6c5778bc93510928da 309 SUPERFAMILY SSF53850 29 273 4.66E-18 T 22-04-2016 VP1753 060079bff5eb0d6c5778bc93510928da 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 290 2.5E-54 T 22-04-2016 VP1753 060079bff5eb0d6c5778bc93510928da 309 Gene3D G3DSA:3.40.190.10 117 156 1.5E-6 T 22-04-2016 VP0238 f7a6d29155491a3f353bad267baee57e 449 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 388 448 1.4E-14 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VP0238 f7a6d29155491a3f353bad267baee57e 449 Gene3D G3DSA:3.60.15.10 13 251 1.6E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP0238 f7a6d29155491a3f353bad267baee57e 449 SUPERFAMILY SSF56281 6 444 9.43E-123 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP0238 f7a6d29155491a3f353bad267baee57e 449 Pfam PF00753 Metallo-beta-lactamase superfamily 28 116 1.2E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP0238 f7a6d29155491a3f353bad267baee57e 449 SMART SM01027 244 374 5.6E-57 T 22-04-2016 IPR022712 Beta-Casp domain VP0238 f7a6d29155491a3f353bad267baee57e 449 PANTHER PTHR11203:SF11 1 444 1.1E-125 T 22-04-2016 VP0238 f7a6d29155491a3f353bad267baee57e 449 Pfam PF10996 Beta-Casp domain 244 374 2.8E-29 T 22-04-2016 IPR022712 Beta-Casp domain VP0238 f7a6d29155491a3f353bad267baee57e 449 PANTHER PTHR11203 1 444 1.1E-125 T 22-04-2016 VP0238 f7a6d29155491a3f353bad267baee57e 449 SMART SM00849 21 226 2.1E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 PANTHER PTHR23501 1 372 4.1E-44 T 22-04-2016 VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 SUPERFAMILY SSF103473 5 372 1.16E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 PRINTS PR01035 Tetracycline resistance protein signature 39 58 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 PRINTS PR01035 Tetracycline resistance protein signature 127 149 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 PRINTS PR01035 Tetracycline resistance protein signature 97 118 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 PRINTS PR01035 Tetracycline resistance protein signature 293 313 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 PRINTS PR01035 Tetracycline resistance protein signature 237 257 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 Gene3D G3DSA:1.20.1250.20 205 376 2.2E-15 T 22-04-2016 VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 Gene3D G3DSA:1.20.1250.20 5 184 2.0E-28 T 22-04-2016 VP2886 eeaf371ac8a823a216a49488b8fb8bcc 385 Pfam PF07690 Major Facilitator Superfamily 7 341 3.3E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP0185 26dfc442120fa654c24a433020cc2ab8 78 SUPERFAMILY SSF143800 2 76 7.85E-30 T 22-04-2016 VP0185 26dfc442120fa654c24a433020cc2ab8 78 Pfam PF00830 Ribosomal L28 family 3 62 4.0E-26 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 VP0185 26dfc442120fa654c24a433020cc2ab8 78 Gene3D G3DSA:2.30.170.40 2 77 1.8E-35 T 22-04-2016 VP0185 26dfc442120fa654c24a433020cc2ab8 78 PANTHER PTHR13528 1 74 6.2E-35 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 VP0185 26dfc442120fa654c24a433020cc2ab8 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP0185 26dfc442120fa654c24a433020cc2ab8 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VP2702 7b84e8cf7db88ec45e1286d873d740e0 362 SUPERFAMILY SSF48452 179 335 3.3E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2702 7b84e8cf7db88ec45e1286d873d740e0 362 SMART SM00028 208 241 4.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2702 7b84e8cf7db88ec45e1286d873d740e0 362 SMART SM00028 274 307 37.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2702 7b84e8cf7db88ec45e1286d873d740e0 362 SMART SM00028 174 207 48.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP2702 7b84e8cf7db88ec45e1286d873d740e0 362 Gene3D G3DSA:1.25.40.10 178 335 1.6E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP1279 4ef5e24d37c49bc436d9c087ecf3f84d 331 Pfam PF11383 Protein of unknown function (DUF3187) 6 322 2.3E-135 T 22-04-2016 IPR021523 Protein of unknown function DUF3187 VP1467 5333143432dc711352b9eed1b0cb162f 394 PANTHER PTHR12526 1 367 2.6E-50 T 22-04-2016 VP1467 5333143432dc711352b9eed1b0cb162f 394 SUPERFAMILY SSF53756 7 370 2.38E-68 T 22-04-2016 VP1467 5333143432dc711352b9eed1b0cb162f 394 Pfam PF13439 Glycosyltransferase Family 4 19 175 1.4E-15 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VP1467 5333143432dc711352b9eed1b0cb162f 394 Gene3D G3DSA:3.40.50.2000 162 345 1.7E-21 T 22-04-2016 VP1467 5333143432dc711352b9eed1b0cb162f 394 Pfam PF00534 Glycosyl transferases group 1 184 347 8.8E-30 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VP0491 3d7910fa4a5967791d4074dc60593cea 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 4.4E-19 T 22-04-2016 IPR021710 Protein of unknown function DUF3293 VP0167 1a7930a1ba33f088b04b44ab2a30292a 254 Pfam PF11932 Protein of unknown function (DUF3450) 13 249 1.2E-88 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VP0167 1a7930a1ba33f088b04b44ab2a30292a 254 PIRSF PIRSF028069 4 254 4.5E-98 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VP0299 9d5f46e66ac0341a85d64b9f16615713 164 Pfam PF11736 Protein of unknown function (DUF3299) 28 161 6.1E-45 T 22-04-2016 IPR021727 Protein of unknown function DUF3299 VP1450 3bf9b364c323a65d9b1be73143c85936 203 Pfam PF02613 Nitrate reductase delta subunit 41 157 1.0E-26 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1450 3bf9b364c323a65d9b1be73143c85936 203 PIRSF PIRSF004690 3 198 3.5E-36 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type VP1450 3bf9b364c323a65d9b1be73143c85936 203 PANTHER PTHR34227 1 201 8.2E-35 T 22-04-2016 VP1450 3bf9b364c323a65d9b1be73143c85936 203 PANTHER PTHR34227:SF5 1 201 8.2E-35 T 22-04-2016 VP1450 3bf9b364c323a65d9b1be73143c85936 203 SUPERFAMILY SSF89155 5 198 7.33E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1450 3bf9b364c323a65d9b1be73143c85936 203 Gene3D G3DSA:1.10.3480.10 5 198 2.0E-47 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VP1322 06d27412c7107e7d8fa74e3c4bdc1c43 269 Pfam PF04991 LicD family 24 242 8.4E-53 T 22-04-2016 IPR007074 LicD family VP1322 06d27412c7107e7d8fa74e3c4bdc1c43 269 PANTHER PTHR13627 133 262 7.5E-22 T 22-04-2016 VP1322 06d27412c7107e7d8fa74e3c4bdc1c43 269 PANTHER PTHR13627 16 73 7.5E-22 T 22-04-2016 VPA1600 dfd843a528f881b2b32f4d62da3ee27a 213 PANTHER PTHR11533 14 212 5.7E-61 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VPA1600 dfd843a528f881b2b32f4d62da3ee27a 213 Pfam PF11940 Domain of unknown function (DUF3458) 5 212 8.8E-66 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VPA1600 dfd843a528f881b2b32f4d62da3ee27a 213 PANTHER PTHR11533:SF152 14 212 5.7E-61 T 22-04-2016 VPA1600 dfd843a528f881b2b32f4d62da3ee27a 213 Gene3D G3DSA:1.25.50.10 2 212 6.6E-72 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VP1299 a2c867d8fd5fd4e0bcd935e67a290ddf 225 PANTHER PTHR30249 1 219 5.4E-89 T 22-04-2016 VP1299 a2c867d8fd5fd4e0bcd935e67a290ddf 225 PANTHER PTHR30249:SF5 1 219 5.4E-89 T 22-04-2016 VP1299 a2c867d8fd5fd4e0bcd935e67a290ddf 225 Pfam PF04172 LrgB-like family 6 217 4.2E-69 T 22-04-2016 IPR007300 CidB/LrgB family VP0876 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 171 205 3.1E-5 T 22-04-2016 VP0876 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 112 126 3.1E-5 T 22-04-2016 VP0876 376c49a9641d283b27fe0c24f66c49a3 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 321 2.5E-111 T 22-04-2016 IPR011970 Lytic murein transglycosylase VP0876 376c49a9641d283b27fe0c24f66c49a3 323 PANTHER PTHR30163:SF2 20 321 1.9E-133 T 22-04-2016 VP0876 376c49a9641d283b27fe0c24f66c49a3 323 Pfam PF13406 Transglycosylase SLT domain 24 319 9.2E-111 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 VP0876 376c49a9641d283b27fe0c24f66c49a3 323 PANTHER PTHR30163 20 321 1.9E-133 T 22-04-2016 IPR011757 Lytic transglycosylase MltB VP0876 376c49a9641d283b27fe0c24f66c49a3 323 SUPERFAMILY SSF53955 12 321 3.02E-101 T 22-04-2016 IPR023346 Lysozyme-like domain VP0876 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 68 111 1.6E-62 T 22-04-2016 VP0876 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 206 322 1.6E-62 T 22-04-2016 VP0768 1a4d857fa8561ee85e407ab2711e57c7 212 PIRSF PIRSF028688 1 212 2.6E-118 T 22-04-2016 IPR014549 Flagellar protein FlgO VP1192 3d30083ca70528ed0e3061c2f58b0fac 159 PANTHER PTHR35603 3 159 1.8E-30 T 22-04-2016 VP1192 3d30083ca70528ed0e3061c2f58b0fac 159 Pfam PF05433 Glycine zipper 2TM domain 65 105 1.2E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 VP0745 9c667ce7d27ec7c3d62b6439620802ad 127 PIRSF PIRSF005610 1 121 1.3E-19 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VP0745 9c667ce7d27ec7c3d62b6439620802ad 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 2.7E-39 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VP0745 9c667ce7d27ec7c3d62b6439620802ad 127 PANTHER PTHR39594 1 127 3.0E-41 T 22-04-2016 VP1822 93d3024cab2d448ea39c0bbba3f421b3 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 9.3E-12 T 22-04-2016 IPR021681 Protein of unknown function DUF3265 VP0284 8e80c7afd98e2129b82513c55802b27a 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 40 152 8.7E-29 T 22-04-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VP1512 b4f4fba01c9efbdb4557a3f0a5e21985 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 3.9E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VP1512 b4f4fba01c9efbdb4557a3f0a5e21985 67 PIRSF PIRSF036704 1 67 2.3E-35 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VP1512 b4f4fba01c9efbdb4557a3f0a5e21985 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 67 6.8E-33 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VP2748 51cf75e5e29fc52abf1d2968b6c27101 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 3.7E-45 T 22-04-2016 IPR007445 Pilus assembly protein, PilO VP2748 51cf75e5e29fc52abf1d2968b6c27101 197 Gene3D G3DSA:3.30.70.60 92 196 1.5E-31 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VP2748 51cf75e5e29fc52abf1d2968b6c27101 197 PIRSF PIRSF016482 1 197 1.6E-68 T 22-04-2016 IPR007445 Pilus assembly protein, PilO VP2748 51cf75e5e29fc52abf1d2968b6c27101 197 PANTHER PTHR39555:SF1 1 196 2.1E-50 T 22-04-2016 VP2748 51cf75e5e29fc52abf1d2968b6c27101 197 PANTHER PTHR39555 1 196 2.1E-50 T 22-04-2016 VP0649 d17c140b7912ad8c27090b5e5b42c5b3 419 Pfam PF11301 Protein of unknown function (DUF3103) 63 417 2.5E-181 T 22-04-2016 IPR021452 Protein of unknown function DUF3103 VP2481 37aaf7fda8e4cb8bdcca023778366716 341 SUPERFAMILY SSF161098 96 288 4.97E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2481 37aaf7fda8e4cb8bdcca023778366716 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 304 1.0E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2481 37aaf7fda8e4cb8bdcca023778366716 341 PANTHER PTHR30465 1 308 4.0E-97 T 22-04-2016 VP2481 37aaf7fda8e4cb8bdcca023778366716 341 Gene3D G3DSA:1.10.3720.10 93 296 1.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP2481 37aaf7fda8e4cb8bdcca023778366716 341 PANTHER PTHR30465:SF2 1 308 4.0E-97 T 22-04-2016 VP0114 9808a8dc04842abc39c66016eb4e96eb 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 3.9E-44 T 22-04-2016 IPR019617 Domain of unknown function DUF2489 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:1.10.300.10 103 195 2.7E-38 T 22-04-2016 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 SMART SM00788 4 431 0.0 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 PANTHER PTHR11846 1 435 3.1E-259 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 220.46 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:3.90.170.10 267 431 3.7E-64 T 22-04-2016 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 6.2E-193 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:3.40.440.10 196 266 3.1E-72 T 22-04-2016 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:3.40.440.10 4 94 3.1E-72 T 22-04-2016 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.0E-176 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 SUPERFAMILY SSF52540 3 436 1.01E-179 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2812 d2021b22f6e2f83212ce78f48e5ef408 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VPA1315 eb6cfc39813a46df19055410c4e40b4a 66 PANTHER PTHR24220:SF547 1 66 9.0E-18 T 22-04-2016 VPA1315 eb6cfc39813a46df19055410c4e40b4a 66 PANTHER PTHR24220 1 66 9.0E-18 T 22-04-2016 VPA1315 eb6cfc39813a46df19055410c4e40b4a 66 SUPERFAMILY SSF52540 2 66 4.77E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPA1315 eb6cfc39813a46df19055410c4e40b4a 66 Gene3D G3DSA:3.40.50.300 5 66 1.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1508 737de206bd328ba21922455e7b622778 154 Pfam PF11749 Protein of unknown function (DUF3305) 58 144 2.5E-19 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 VP1996 04274130e8788a147430b27b67b1a2aa 427 Pfam PF02687 FtsX-like permease family 296 420 1.7E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VP1996 04274130e8788a147430b27b67b1a2aa 427 PANTHER PTHR30572 5 427 1.9E-64 T 22-04-2016 VP1996 04274130e8788a147430b27b67b1a2aa 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 4.0E-27 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VP0344 5be39991add23a37a87bd615517aece1 363 PANTHER PTHR11835:SF35 1 360 3.8E-209 T 22-04-2016 VP0344 5be39991add23a37a87bd615517aece1 363 Gene3D G3DSA:3.40.718.10 3 360 5.0E-134 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VP0344 5be39991add23a37a87bd615517aece1 363 PANTHER PTHR11835 1 360 3.8E-209 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VP0344 5be39991add23a37a87bd615517aece1 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.34 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VP0344 5be39991add23a37a87bd615517aece1 363 SMART SM01329 7 356 7.3E-204 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VP0344 5be39991add23a37a87bd615517aece1 363 SUPERFAMILY SSF53659 4 361 1.73E-123 T 22-04-2016 VP0344 5be39991add23a37a87bd615517aece1 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 4.6E-165 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VP0344 5be39991add23a37a87bd615517aece1 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VP0344 5be39991add23a37a87bd615517aece1 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 9.1E-137 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VP2072 5b1e5382e7d898eccc27941f51b7e233 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VP2072 5b1e5382e7d898eccc27941f51b7e233 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 0.0 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VP2072 5b1e5382e7d898eccc27941f51b7e233 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 375.586 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VP2072 5b1e5382e7d898eccc27941f51b7e233 528 PANTHER PTHR10283:SF93 12 168 1.1E-277 T 22-04-2016 VP2072 5b1e5382e7d898eccc27941f51b7e233 528 PANTHER PTHR10283:SF93 197 513 1.1E-277 T 22-04-2016 VP2072 5b1e5382e7d898eccc27941f51b7e233 528 PANTHER PTHR10283 12 168 1.1E-277 T 22-04-2016 VP2072 5b1e5382e7d898eccc27941f51b7e233 528 PANTHER PTHR10283 197 513 1.1E-277 T 22-04-2016 VP2869 7457896128bd9ed81e4d6baad409beb5 514 PANTHER PTHR11819 1 247 6.6E-175 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP2869 7457896128bd9ed81e4d6baad409beb5 514 PANTHER PTHR11819 280 505 6.6E-175 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP2869 7457896128bd9ed81e4d6baad409beb5 514 PANTHER PTHR11819:SF159 1 247 6.6E-175 T 22-04-2016 VP2869 7457896128bd9ed81e4d6baad409beb5 514 PANTHER PTHR11819:SF159 280 505 6.6E-175 T 22-04-2016 VP2869 7457896128bd9ed81e4d6baad409beb5 514 Pfam PF00474 Sodium:solute symporter family 312 430 1.1E-16 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP2869 7457896128bd9ed81e4d6baad409beb5 514 Pfam PF00474 Sodium:solute symporter family 1 235 3.4E-27 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VP2869 7457896128bd9ed81e4d6baad409beb5 514 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 1 505 1.3E-227 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily VP0749 ee63c743025416a3c57dda3bf6b1d420 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 3.2E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP0749 ee63c743025416a3c57dda3bf6b1d420 157 Gene3D G3DSA:3.90.960.10 1 156 4.5E-59 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP0749 ee63c743025416a3c57dda3bf6b1d420 157 PANTHER PTHR30411 1 156 4.1E-68 T 22-04-2016 VP0749 ee63c743025416a3c57dda3bf6b1d420 157 PANTHER PTHR30411:SF0 1 156 4.1E-68 T 22-04-2016 VP0749 ee63c743025416a3c57dda3bf6b1d420 157 PIRSF PIRSF006181 1 157 3.9E-54 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VP0749 ee63c743025416a3c57dda3bf6b1d420 157 SUPERFAMILY SSF55826 2 156 9.42E-44 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VP0749 ee63c743025416a3c57dda3bf6b1d420 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 6.5E-60 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VP1970 3df73cd9f8476fdb90ce31edcabf243f 187 Pfam PF04279 Intracellular septation protein A 1 174 1.5E-66 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VP1970 3df73cd9f8476fdb90ce31edcabf243f 187 PANTHER PTHR36917 1 185 7.1E-70 T 22-04-2016 VP1970 3df73cd9f8476fdb90ce31edcabf243f 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 1.3E-62 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VP1970 3df73cd9f8476fdb90ce31edcabf243f 187 PANTHER PTHR36917:SF1 1 185 7.1E-70 T 22-04-2016 VP1970 3df73cd9f8476fdb90ce31edcabf243f 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.39 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VP2796 07b17b30b7273d37b8c10d9b44e692e2 339 SUPERFAMILY SSF55729 1 338 6.34E-129 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2796 07b17b30b7273d37b8c10d9b44e692e2 339 PANTHER PTHR30420:SF1 1 338 2.5E-186 T 22-04-2016 VP2796 07b17b30b7273d37b8c10d9b44e692e2 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 1.9E-137 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VP2796 07b17b30b7273d37b8c10d9b44e692e2 339 Gene3D G3DSA:2.40.40.20 278 338 2.6E-14 T 22-04-2016 VP2796 07b17b30b7273d37b8c10d9b44e692e2 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 5.9E-133 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VP2796 07b17b30b7273d37b8c10d9b44e692e2 339 PANTHER PTHR30420 1 338 2.5E-186 T 22-04-2016 VP2796 07b17b30b7273d37b8c10d9b44e692e2 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 2.9E-132 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PANTHER PTHR12428 168 538 6.4E-140 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 Pfam PF14849 YidC periplasmic domain 65 339 3.0E-84 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PANTHER PTHR12428:SF14 168 538 6.4E-140 T 22-04-2016 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 26.047 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 Pfam PF02096 60Kd inner membrane protein 351 530 1.3E-63 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 1.0E-73 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VP0003 8e5d06d1e4947dd529b902d584b31bdc 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.7E-111 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VP1050 4e76ff708926141b73aa861b280b306e 125 SUPERFAMILY SSF58104 1 122 1.01E-12 T 22-04-2016 VP1050 4e76ff708926141b73aa861b280b306e 125 Gene3D G3DSA:1.10.287.950 1 95 6.4E-11 T 22-04-2016 VP2974 9871e65429b307f497c5913806438425 336 Gene3D G3DSA:3.40.50.1820 26 325 9.0E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP2974 9871e65429b307f497c5913806438425 336 Pfam PF12146 Serine aminopeptidase, S33 53 310 7.5E-60 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 VP2974 9871e65429b307f497c5913806438425 336 SUPERFAMILY SSF53474 41 324 4.19E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VP2974 9871e65429b307f497c5913806438425 336 PANTHER PTHR11614:SF100 12 335 3.9E-120 T 22-04-2016 VP2974 9871e65429b307f497c5913806438425 336 PANTHER PTHR11614 12 335 3.9E-120 T 22-04-2016 VP1425 61248b5b6aac1a18d048e9156e2de64c 396 Gene3D G3DSA:3.40.50.1970 26 200 6.0E-54 T 22-04-2016 VP1425 61248b5b6aac1a18d048e9156e2de64c 396 PANTHER PTHR11496 31 390 4.2E-106 T 22-04-2016 VP1425 61248b5b6aac1a18d048e9156e2de64c 396 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 276 296 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VP1425 61248b5b6aac1a18d048e9156e2de64c 396 Gene3D G3DSA:1.20.1090.10 201 391 5.4E-53 T 22-04-2016 VP1425 61248b5b6aac1a18d048e9156e2de64c 396 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 385 4.8E-107 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VP1425 61248b5b6aac1a18d048e9156e2de64c 396 SUPERFAMILY SSF56796 26 392 3.93E-109 T 22-04-2016 VP1425 61248b5b6aac1a18d048e9156e2de64c 396 PANTHER PTHR11496:SF74 31 390 4.2E-106 T 22-04-2016 VP0798 199725fed71d391b7e43605179849343 247 PANTHER PTHR37468 1 243 1.4E-96 T 22-04-2016 VP0798 199725fed71d391b7e43605179849343 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 3.0E-40 T 22-04-2016 VP0798 199725fed71d391b7e43605179849343 247 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 28.249 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VP1315 c646476853e625132600cd48c5675cdd 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VP1315 c646476853e625132600cd48c5675cdd 407 Pfam PF07690 Major Facilitator Superfamily 16 352 1.2E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VP1315 c646476853e625132600cd48c5675cdd 407 Gene3D G3DSA:1.20.1250.20 11 191 4.6E-26 T 22-04-2016 VP1315 c646476853e625132600cd48c5675cdd 407 PANTHER PTHR23501:SF11 5 380 1.0E-132 T 22-04-2016 VP1315 c646476853e625132600cd48c5675cdd 407 PANTHER PTHR23501 5 380 1.0E-132 T 22-04-2016 VP1315 c646476853e625132600cd48c5675cdd 407 SUPERFAMILY SSF103473 9 387 8.24E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain VP1315 c646476853e625132600cd48c5675cdd 407 Gene3D G3DSA:1.20.1250.20 211 387 1.1E-10 T 22-04-2016 VP1915 45b2a4a90e8d3c10f0550aad5a05f6ea 186 SUPERFAMILY SSF55166 72 186 9.81E-33 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VP1915 45b2a4a90e8d3c10f0550aad5a05f6ea 186 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 35 1.8E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VP1915 45b2a4a90e8d3c10f0550aad5a05f6ea 186 PANTHER PTHR37425 2 186 3.2E-57 T 22-04-2016 VP1915 45b2a4a90e8d3c10f0550aad5a05f6ea 186 Gene3D G3DSA:3.30.1380.10 71 186 1.1E-29 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VP1915 45b2a4a90e8d3c10f0550aad5a05f6ea 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 39 186 5.4E-67 T 22-04-2016 IPR010275 Protein of unknown function DUF882 VP1247 289b7c8bb8c504857c100db20fff0505 367 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VP1247 289b7c8bb8c504857c100db20fff0505 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 9 366 52.364 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VP1247 289b7c8bb8c504857c100db20fff0505 367 Gene3D G3DSA:3.40.640.10 24 264 4.3E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP1247 289b7c8bb8c504857c100db20fff0505 367 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 11 366 7.2E-163 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VP1247 289b7c8bb8c504857c100db20fff0505 367 PANTHER PTHR21152:SF1 4 365 1.9E-187 T 22-04-2016 VP1247 289b7c8bb8c504857c100db20fff0505 367 Pfam PF00266 Aminotransferase class-V 11 355 7.4E-63 T 22-04-2016 IPR000192 Aminotransferase class V domain VP1247 289b7c8bb8c504857c100db20fff0505 367 Gene3D G3DSA:3.90.1150.10 265 365 8.5E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP1247 289b7c8bb8c504857c100db20fff0505 367 SUPERFAMILY SSF53383 10 364 1.46E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP1247 289b7c8bb8c504857c100db20fff0505 367 PIRSF PIRSF000525 5 367 2.0E-154 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VP1247 289b7c8bb8c504857c100db20fff0505 367 PANTHER PTHR21152 4 365 1.9E-187 T 22-04-2016 VP2950 b5cfbdadbe5d9ffca382a4afe1f4e96b 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 9.2E-20 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VP2950 b5cfbdadbe5d9ffca382a4afe1f4e96b 136 PANTHER PTHR35091 15 136 1.4E-36 T 22-04-2016 VP0977 e4786e556d1bb72f21da09f53e1bf927 405 Pfam PF02687 FtsX-like permease family 274 398 2.0E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VP0977 e4786e556d1bb72f21da09f53e1bf927 405 PANTHER PTHR30489:SF8 4 405 6.0E-204 T 22-04-2016 VP0977 e4786e556d1bb72f21da09f53e1bf927 405 Pfam PF12704 MacB-like periplasmic core domain 32 211 5.3E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VP0977 e4786e556d1bb72f21da09f53e1bf927 405 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 7 405 1.1E-134 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VP0977 e4786e556d1bb72f21da09f53e1bf927 405 PANTHER PTHR30489 4 405 6.0E-204 T 22-04-2016 VP3004 92b923dd890bdb31661913b91e57b95f 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 3.9E-62 T 22-04-2016 IPR003744 Protein of unknown function DUF165 VP3004 92b923dd890bdb31661913b91e57b95f 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 5.1E-38 T 22-04-2016 IPR003744 Protein of unknown function DUF165 VP3004 92b923dd890bdb31661913b91e57b95f 222 PANTHER PTHR34300 1 220 6.8E-131 T 22-04-2016 VP3004 92b923dd890bdb31661913b91e57b95f 222 PANTHER PTHR34300:SF1 1 220 6.8E-131 T 22-04-2016 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 PANTHER PTHR11404 1 201 4.4E-96 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 PIRSF PIRSF000349 1 202 4.5E-81 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 196 2.4E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 5.9E-28 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 Gene3D G3DSA:1.10.287.990 20 85 1.4E-22 T 22-04-2016 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.051856E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.051856E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.051856E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.051856E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.051856E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 SUPERFAMILY SSF54719 88 200 4.71E-44 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP2860 cf2a7bbe8c9a667f32afc35a08b30abb 202 SUPERFAMILY SSF46609 1 86 2.36E-30 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VP0852 7aff44e801b89258a1844063769d6dfd 262 Gene3D G3DSA:3.40.50.300 3 216 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0852 7aff44e801b89258a1844063769d6dfd 262 SMART SM00382 29 199 4.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0852 7aff44e801b89258a1844063769d6dfd 262 SUPERFAMILY SSF52540 4 217 8.51E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0852 7aff44e801b89258a1844063769d6dfd 262 PANTHER PTHR24220 6 241 5.7E-124 T 22-04-2016 VP0852 7aff44e801b89258a1844063769d6dfd 262 Pfam PF00005 ABC transporter 20 148 3.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP0852 7aff44e801b89258a1844063769d6dfd 262 PANTHER PTHR24220:SF466 6 241 5.7E-124 T 22-04-2016 VP1351 3a536d68c9727d87b28318185a889de4 345 PANTHER PTHR11820 290 345 8.6E-144 T 22-04-2016 VP1351 3a536d68c9727d87b28318185a889de4 345 PANTHER PTHR11820 9 274 8.6E-144 T 22-04-2016 VP1351 3a536d68c9727d87b28318185a889de4 345 Gene3D G3DSA:3.90.850.10 312 324 5.2E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VP1351 3a536d68c9727d87b28318185a889de4 345 Gene3D G3DSA:3.90.850.10 77 276 5.2E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VP1351 3a536d68c9727d87b28318185a889de4 345 SUPERFAMILY SSF56529 83 339 2.75E-55 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VP1351 3a536d68c9727d87b28318185a889de4 345 PANTHER PTHR11820:SF85 290 345 8.6E-144 T 22-04-2016 VP1351 3a536d68c9727d87b28318185a889de4 345 PANTHER PTHR11820:SF85 9 274 8.6E-144 T 22-04-2016 VP1351 3a536d68c9727d87b28318185a889de4 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 1.2E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VP0078 d868e2c4104b7fdf3457c06410874bc3 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.364 T 22-04-2016 IPR019598 Universal stress protein B VP0078 d868e2c4104b7fdf3457c06410874bc3 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 4.1E-51 T 22-04-2016 IPR019598 Universal stress protein B VP2939 cbd8759373c58a478b09a74eb66eabcd 369 SUPERFAMILY SSF53335 10 367 2.33E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2939 cbd8759373c58a478b09a74eb66eabcd 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 45.216 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VP2939 cbd8759373c58a478b09a74eb66eabcd 369 PANTHER PTHR11061 10 368 4.0E-227 T 22-04-2016 VP2939 cbd8759373c58a478b09a74eb66eabcd 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site VP2939 cbd8759373c58a478b09a74eb66eabcd 369 Gene3D G3DSA:3.40.50.150 154 367 4.4E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP2939 cbd8759373c58a478b09a74eb66eabcd 369 PANTHER PTHR11061:SF25 10 368 4.0E-227 T 22-04-2016 VP2939 cbd8759373c58a478b09a74eb66eabcd 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VP2939 cbd8759373c58a478b09a74eb66eabcd 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 4.4E-189 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VP2939 cbd8759373c58a478b09a74eb66eabcd 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 5.5E-190 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VP2529 f3a81cf03809b3148dbb33accf2d72a0 64 Gene3D G3DSA:3.30.50.10 1 63 1.9E-25 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 VP2529 f3a81cf03809b3148dbb33accf2d72a0 64 PANTHER PTHR36150 2 64 5.1E-25 T 22-04-2016 VP2529 f3a81cf03809b3148dbb33accf2d72a0 64 PANTHER PTHR36150:SF1 2 64 5.1E-25 T 22-04-2016 VP2529 f3a81cf03809b3148dbb33accf2d72a0 64 Pfam PF03884 Domain of unknown function (DUF329) 7 57 3.1E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VP2529 f3a81cf03809b3148dbb33accf2d72a0 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.451 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VP2529 f3a81cf03809b3148dbb33accf2d72a0 64 SUPERFAMILY SSF57716 2 62 7.13E-21 T 22-04-2016 VP0673 e5a7ceae8b07e08cda9e808a6667544b 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 2.3E-13 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VP0673 e5a7ceae8b07e08cda9e808a6667544b 154 PANTHER PTHR39563 2 152 4.7E-101 T 22-04-2016 VP0673 e5a7ceae8b07e08cda9e808a6667544b 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.91 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 VP0673 e5a7ceae8b07e08cda9e808a6667544b 154 Gene3D G3DSA:3.40.50.2020 1 147 9.1E-41 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP0673 e5a7ceae8b07e08cda9e808a6667544b 154 SUPERFAMILY SSF53271 5 146 8.95E-28 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 Pfam PF01471 Putative peptidoglycan binding domain 465 520 2.6E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 SUPERFAMILY SSF52540 6 264 1.32E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 SUPERFAMILY SSF47090 453 527 3.92E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 Pfam PF13401 AAA domain 42 171 5.6E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 PANTHER PTHR35894:SF2 2 532 2.0E-176 T 22-04-2016 VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 SMART SM00382 42 195 1.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 Gene3D G3DSA:3.40.50.300 27 183 1.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 PANTHER PTHR35894 2 532 2.0E-176 T 22-04-2016 VP0415 3c4d7f39787b35fa04ada5f6b0671fbd 539 Gene3D G3DSA:1.10.101.10 455 526 1.6E-13 T 22-04-2016 IPR002477 Peptidoglycan binding-like VP3039 3a2ab64676fc6eb4c4cdc4225c143439 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 2.2E-58 T 22-04-2016 IPR007456 Smg VP3039 3a2ab64676fc6eb4c4cdc4225c143439 159 PANTHER PTHR38692:SF1 1 159 5.2E-76 T 22-04-2016 VP3039 3a2ab64676fc6eb4c4cdc4225c143439 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.554 T 22-04-2016 IPR007456 Smg VP3039 3a2ab64676fc6eb4c4cdc4225c143439 159 PANTHER PTHR38692 1 159 5.2E-76 T 22-04-2016 VP0192 1c1b291ae9dd12d72d4713626885c55b 262 Pfam PF02709 N-terminal domain of galactosyltransferase 166 226 3.7E-15 T 22-04-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 VP0192 1c1b291ae9dd12d72d4713626885c55b 262 SUPERFAMILY SSF53448 164 256 2.25E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0192 1c1b291ae9dd12d72d4713626885c55b 262 SUPERFAMILY SSF53448 1 123 2.25E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0192 1c1b291ae9dd12d72d4713626885c55b 262 Pfam PF00535 Glycosyl transferase family 2 5 110 7.6E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VP0192 1c1b291ae9dd12d72d4713626885c55b 262 Gene3D G3DSA:3.90.550.10 144 258 5.6E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0192 1c1b291ae9dd12d72d4713626885c55b 262 Gene3D G3DSA:3.90.550.10 1 104 5.6E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0192 1c1b291ae9dd12d72d4713626885c55b 262 PANTHER PTHR22916 161 209 8.7E-28 T 22-04-2016 VP0192 1c1b291ae9dd12d72d4713626885c55b 262 PANTHER PTHR22916 1 140 8.7E-28 T 22-04-2016 VP0927 a9fc6aa30351055e81e661c3cc089aac 404 PANTHER PTHR11751:SF303 9 399 7.1E-193 T 22-04-2016 VP0927 a9fc6aa30351055e81e661c3cc089aac 404 Pfam PF00155 Aminotransferase class I and II 61 391 1.7E-47 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VP0927 a9fc6aa30351055e81e661c3cc089aac 404 SUPERFAMILY SSF53383 5 400 2.42E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0927 a9fc6aa30351055e81e661c3cc089aac 404 PANTHER PTHR11751 9 399 7.1E-193 T 22-04-2016 VP0927 a9fc6aa30351055e81e661c3cc089aac 404 Gene3D G3DSA:3.40.640.10 51 279 7.2E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0927 a9fc6aa30351055e81e661c3cc089aac 404 Gene3D G3DSA:3.90.1150.10 280 403 4.2E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 Gene3D G3DSA:1.10.275.10 4 133 5.6E-52 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PANTHER PTHR11444:SF22 1 454 5.5E-280 T 22-04-2016 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 5.0E-31 T 22-04-2016 IPR000362 Fumarate lyase family VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 5.0E-31 T 22-04-2016 IPR000362 Fumarate lyase family VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 5.0E-31 T 22-04-2016 IPR000362 Fumarate lyase family VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 5.0E-31 T 22-04-2016 IPR000362 Fumarate lyase family VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.8E-5 T 22-04-2016 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.8E-5 T 22-04-2016 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.8E-5 T 22-04-2016 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.334 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 PANTHER PTHR11444 1 454 5.5E-280 T 22-04-2016 IPR000362 Fumarate lyase family VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 Pfam PF00206 Lyase 13 337 1.5E-91 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 Gene3D G3DSA:1.20.200.10 134 413 9.6E-83 T 22-04-2016 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 SUPERFAMILY SSF48557 5 455 1.73E-133 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 Gene3D G3DSA:1.10.40.30 414 459 2.2E-20 T 22-04-2016 VP2873 f7a6178357a8f3e747037df6e79ca7f7 461 Pfam PF10415 Fumarase C C-terminus 403 455 9.2E-19 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 Pfam PF04397 LytTr DNA-binding domain 146 238 2.2E-21 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 SUPERFAMILY SSF52172 1 123 3.56E-28 T 22-04-2016 IPR011006 CheY-like superfamily VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:3.40.50.2300 1 117 1.7E-28 T 22-04-2016 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 Pfam PF00072 Response regulator receiver domain 5 112 9.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 SMART SM00850 145 239 3.3E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 SMART SM00448 2 112 7.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 PANTHER PTHR26402:SF524 2 115 5.4E-35 T 22-04-2016 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 PANTHER PTHR26402 2 115 5.4E-35 T 22-04-2016 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:2.20.25.10 217 240 4.5E-5 T 22-04-2016 VP0538 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:2.40.50.40 137 201 4.5E-8 T 22-04-2016 VP0607 5cfc5e1a63d8cd3c377acdb1c8075b7b 316 PANTHER PTHR34475:SF1 1 315 6.2E-47 T 22-04-2016 VP0607 5cfc5e1a63d8cd3c377acdb1c8075b7b 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 4.7E-26 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 VP0607 5cfc5e1a63d8cd3c377acdb1c8075b7b 316 Gene3D G3DSA:1.10.260.40 14 82 5.1E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0607 5cfc5e1a63d8cd3c377acdb1c8075b7b 316 SMART SM00530 19 80 1.1E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP0607 5cfc5e1a63d8cd3c377acdb1c8075b7b 316 Pfam PF13413 Helix-turn-helix domain 20 78 4.9E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0607 5cfc5e1a63d8cd3c377acdb1c8075b7b 316 PANTHER PTHR34475 1 315 6.2E-47 T 22-04-2016 VP0607 5cfc5e1a63d8cd3c377acdb1c8075b7b 316 SUPERFAMILY SSF47413 14 79 4.79E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP0548 cf3d46660b00b9ce8a783680bc3099a8 333 Gene3D G3DSA:2.70.70.10 148 274 8.1E-45 T 22-04-2016 VP0548 cf3d46660b00b9ce8a783680bc3099a8 333 SUPERFAMILY SSF51261 77 272 7.98E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif VP0548 cf3d46660b00b9ce8a783680bc3099a8 333 PANTHER PTHR21666 112 283 1.6E-39 T 22-04-2016 VP0548 cf3d46660b00b9ce8a783680bc3099a8 333 Pfam PF01551 Peptidase family M23 174 269 3.4E-29 T 22-04-2016 IPR016047 Peptidase M23 VP0042 4c5d8632664967d43009b7baa775eafd 137 PANTHER PTHR40942:SF1 1 137 2.0E-59 T 22-04-2016 VP0042 4c5d8632664967d43009b7baa775eafd 137 Gene3D G3DSA:1.10.760.10 58 134 5.4E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0042 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 3.8E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VP0042 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 3.8E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VP0042 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 3.8E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VP0042 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 3.8E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VP0042 4c5d8632664967d43009b7baa775eafd 137 SUPERFAMILY SSF46626 60 134 8.33E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0042 4c5d8632664967d43009b7baa775eafd 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 2.5E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VP0042 4c5d8632664967d43009b7baa775eafd 137 PANTHER PTHR40942 1 137 2.0E-59 T 22-04-2016 VPA0652 faa11062b21b56e37d8e61ae87c4e7cb 157 Gene3D G3DSA:3.20.20.140 2 130 4.8E-14 T 22-04-2016 VPA0652 faa11062b21b56e37d8e61ae87c4e7cb 157 PANTHER PTHR22642 2 157 4.9E-36 T 22-04-2016 VPA0652 faa11062b21b56e37d8e61ae87c4e7cb 157 SUPERFAMILY SSF51556 3 138 3.32E-12 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPA0652 faa11062b21b56e37d8e61ae87c4e7cb 157 PANTHER PTHR22642:SF2 2 157 4.9E-36 T 22-04-2016 VPA0652 faa11062b21b56e37d8e61ae87c4e7cb 157 Pfam PF07969 Amidohydrolase family 2 157 2.5E-38 T 22-04-2016 IPR013108 Amidohydrolase 3 VP1538 a14767708335afdb128dbd5496ce4387 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 2.0E-17 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VP1538 a14767708335afdb128dbd5496ce4387 54 PANTHER PTHR41532 2 51 6.5E-19 T 22-04-2016 VP1538 a14767708335afdb128dbd5496ce4387 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 6.5E-21 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VP1109 8cda7e5bd0c9ef30ad97fbf88d09db40 328 Gene3D G3DSA:1.10.530.40 150 325 5.8E-24 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 VP1109 8cda7e5bd0c9ef30ad97fbf88d09db40 328 SUPERFAMILY SSF53955 102 327 7.5E-32 T 22-04-2016 IPR023346 Lysozyme-like domain VP1066 5c0a2941430dea22c2ec94733a4a7b24 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 185 8.4E-27 T 22-04-2016 IPR009576 Biofilm formation YgiB VP0620 0f13211df1d38cb525325ca3058ca744 196 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VP0620 0f13211df1d38cb525325ca3058ca744 196 Pfam PF01184 GPR1/FUN34/yaaH family 3 174 6.1E-35 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VP0620 0f13211df1d38cb525325ca3058ca744 196 PANTHER PTHR30178:SF6 1 187 1.8E-130 T 22-04-2016 VP0620 0f13211df1d38cb525325ca3058ca744 196 PANTHER PTHR30178 1 187 1.8E-130 T 22-04-2016 VP1819 fba304a2ada4300acd5d9840efdca80e 148 SUPERFAMILY SSF74653 83 146 2.62E-11 T 22-04-2016 VP1819 fba304a2ada4300acd5d9840efdca80e 148 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 84 146 6.9E-9 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 VP1819 fba304a2ada4300acd5d9840efdca80e 148 Gene3D G3DSA:3.30.1150.10 82 146 1.6E-5 T 22-04-2016 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.054 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PANTHER PTHR21060:SF15 1 395 1.1E-271 T 22-04-2016 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 Gene3D G3DSA:3.30.420.40 87 203 1.9E-8 T 22-04-2016 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 SUPERFAMILY SSF53067 3 195 7.77E-66 T 22-04-2016 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 SUPERFAMILY SSF53067 156 395 1.76E-85 T 22-04-2016 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PANTHER PTHR21060 1 395 1.1E-271 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 Pfam PF00871 Acetokinase family 5 390 1.5E-168 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PIRSF PIRSF000722 1 397 6.9E-149 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 3.1E-174 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VP2082 f0bbc3b14eb171a0dc8f7434e4484968 398 Gene3D G3DSA:3.30.420.40 204 395 7.5E-77 T 22-04-2016 VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 SUPERFAMILY SSF51735 3 253 1.7E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 Gene3D G3DSA:3.40.50.720 2 253 1.5E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 PANTHER PTHR24321:SF6 1 253 5.1E-14 T 22-04-2016 VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 PANTHER PTHR24321 1 253 5.1E-14 T 22-04-2016 VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 8.0E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.0E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 8.0E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.0E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 8.0E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VP0207 2192ff50d90933c8bc70d6ca073e8a04 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 1.7E-25 T 22-04-2016 VP1314 c9a7d11ecd358b3f899d6a4f6db4757d 193 Pfam PF07209 Protein of unknown function (DUF1415) 17 185 1.0E-65 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 VPA1558 4d890268a584a1553f7184597269cd71 95 PANTHER PTHR24423:SF486 1 95 2.6E-26 T 22-04-2016 VPA1558 4d890268a584a1553f7184597269cd71 95 PANTHER PTHR24423 1 95 2.6E-26 T 22-04-2016 VPA1558 4d890268a584a1553f7184597269cd71 95 SUPERFAMILY SSF55874 2 61 1.78E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPA1558 4d890268a584a1553f7184597269cd71 95 PRINTS PR00344 Bacterial sensor protein C-terminal signature 20 38 3.9E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPA1558 4d890268a584a1553f7184597269cd71 95 PRINTS PR00344 Bacterial sensor protein C-terminal signature 3 13 3.9E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPA1558 4d890268a584a1553f7184597269cd71 95 PRINTS PR00344 Bacterial sensor protein C-terminal signature 44 57 3.9E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPA1558 4d890268a584a1553f7184597269cd71 95 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 3 58 2.0E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPA1558 4d890268a584a1553f7184597269cd71 95 Gene3D G3DSA:3.30.565.10 2 95 5.7E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VP0230 beeda26ed995b2f4a719c50ad29ae815 412 PANTHER PTHR12526 2 407 6.6E-24 T 22-04-2016 VP0230 beeda26ed995b2f4a719c50ad29ae815 412 Pfam PF00534 Glycosyl transferases group 1 210 379 1.3E-7 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VP0230 beeda26ed995b2f4a719c50ad29ae815 412 SUPERFAMILY SSF53756 2 401 2.2E-41 T 22-04-2016 VP0230 beeda26ed995b2f4a719c50ad29ae815 412 Gene3D G3DSA:3.40.50.2000 22 135 3.3E-6 T 22-04-2016 VP0230 beeda26ed995b2f4a719c50ad29ae815 412 Pfam PF13579 Glycosyl transferase 4-like domain 17 189 3.9E-12 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VP0230 beeda26ed995b2f4a719c50ad29ae815 412 Gene3D G3DSA:3.40.50.2000 215 304 8.7E-5 T 22-04-2016 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 PANTHER PTHR30126:SF6 1 309 8.6E-214 T 22-04-2016 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:3.40.190.10 184 260 3.2E-30 T 22-04-2016 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 SUPERFAMILY SSF53850 91 322 3.53E-42 T 22-04-2016 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 Pfam PF03466 LysR substrate binding domain 91 292 3.9E-39 T 22-04-2016 IPR005119 LysR, substrate-binding VP1101 b33fb0ec9a51ae39d74781188c76662a 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1101 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:1.10.10.10 1 81 3.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1101 b33fb0ec9a51ae39d74781188c76662a 324 PANTHER PTHR30126 1 309 8.6E-214 T 22-04-2016 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:3.40.190.10 91 183 3.9E-20 T 22-04-2016 VP1101 b33fb0ec9a51ae39d74781188c76662a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VP2690 8a289289bda35a858068c1ae965b40db 298 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 3.8E-92 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VP2690 8a289289bda35a858068c1ae965b40db 298 PANTHER PTHR34138 1 295 1.8E-84 T 22-04-2016 VP2690 8a289289bda35a858068c1ae965b40db 298 PANTHER PTHR34138:SF1 1 295 1.8E-84 T 22-04-2016 VP2690 8a289289bda35a858068c1ae965b40db 298 PIRSF PIRSF038471 2 284 7.2E-83 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VP2690 8a289289bda35a858068c1ae965b40db 298 Pfam PF04085 rod shape-determining protein MreC 123 269 1.3E-40 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VPA0340 4e008f681fff6b93a1a9b84c57b0e962 195 Pfam PF13616 PPIC-type PPIASE domain 33 139 1.7E-21 T 22-04-2016 VPA0340 4e008f681fff6b93a1a9b84c57b0e962 195 Pfam PF13616 PPIC-type PPIASE domain 146 195 2.3E-5 T 22-04-2016 VPA0340 4e008f681fff6b93a1a9b84c57b0e962 195 Gene3D G3DSA:3.10.50.40 38 145 6.6E-28 T 22-04-2016 VPA0340 4e008f681fff6b93a1a9b84c57b0e962 195 SUPERFAMILY SSF54534 42 140 3.6E-25 T 22-04-2016 VPA0340 4e008f681fff6b93a1a9b84c57b0e962 195 PANTHER PTHR10657 1 195 3.6E-54 T 22-04-2016 VPA0340 4e008f681fff6b93a1a9b84c57b0e962 195 PANTHER PTHR10657:SF15 1 195 3.6E-54 T 22-04-2016 VPA0340 4e008f681fff6b93a1a9b84c57b0e962 195 SUPERFAMILY SSF54534 146 195 1.31E-9 T 22-04-2016 VPA0340 4e008f681fff6b93a1a9b84c57b0e962 195 Gene3D G3DSA:3.10.50.40 148 195 6.2E-10 T 22-04-2016 VP2903 52a0c70507845f15b1b401778fec9f4a 452 SUPERFAMILY SSF52540 131 232 4.88E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2903 52a0c70507845f15b1b401778fec9f4a 452 SUPERFAMILY SSF52540 13 85 4.88E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2903 52a0c70507845f15b1b401778fec9f4a 452 Gene3D G3DSA:3.40.50.300 148 226 1.6E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2903 52a0c70507845f15b1b401778fec9f4a 452 Gene3D G3DSA:3.40.50.300 13 104 1.6E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2903 52a0c70507845f15b1b401778fec9f4a 452 Pfam PF07693 KAP family P-loop domain 17 322 2.8E-67 T 22-04-2016 IPR011646 KAP family P-loop domain VP1006 3e193568cebebd33827dada4d1164b42 261 PANTHER PTHR30269:SF25 4 260 3.8E-156 T 22-04-2016 VP1006 3e193568cebebd33827dada4d1164b42 261 PANTHER PTHR30269 4 260 3.8E-156 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP1006 3e193568cebebd33827dada4d1164b42 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 2.2E-45 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP0615 8664a571ddf0d8d196c1fae894849f24 443 PANTHER PTHR30008:SF0 2 442 5.6E-185 T 22-04-2016 VP0615 8664a571ddf0d8d196c1fae894849f24 443 PANTHER PTHR30008 2 442 5.6E-185 T 22-04-2016 VP0615 8664a571ddf0d8d196c1fae894849f24 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 356 1.1E-134 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VP0615 8664a571ddf0d8d196c1fae894849f24 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.312 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VP0615 8664a571ddf0d8d196c1fae894849f24 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.3E-30 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VP0615 8664a571ddf0d8d196c1fae894849f24 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 2.2E-103 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VP2794 d34f0777799f24487237e2966938afab 263 PANTHER PTHR31136:SF2 6 262 2.5E-126 T 22-04-2016 VP2794 d34f0777799f24487237e2966938afab 263 SMART SM01150 3 262 7.6E-117 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 VP2794 d34f0777799f24487237e2966938afab 263 Pfam PF07063 Domain of unknown function (DUF1338) 136 261 3.3E-27 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 VP2794 d34f0777799f24487237e2966938afab 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 113 6.1E-19 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 VP2794 d34f0777799f24487237e2966938afab 263 PANTHER PTHR31136 6 262 2.5E-126 T 22-04-2016 VP0241 b95a25f5633231d84fc45f61a1898b84 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 4.9E-20 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 VP0241 b95a25f5633231d84fc45f61a1898b84 140 PANTHER PTHR34980 1 140 3.9E-24 T 22-04-2016 VP0241 b95a25f5633231d84fc45f61a1898b84 140 PANTHER PTHR34980:SF1 1 140 3.9E-24 T 22-04-2016 VP1506 ad276f54d1068130e8efc2f42ef2c692 277 Gene3D G3DSA:3.40.140.10 132 271 1.0E-52 T 22-04-2016 VP1506 ad276f54d1068130e8efc2f42ef2c692 277 PIRSF PIRSF015626 2 271 9.1E-98 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 VP1506 ad276f54d1068130e8efc2f42ef2c692 277 Pfam PF02634 FdhD/NarQ family 35 266 2.8E-73 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 VP1506 ad276f54d1068130e8efc2f42ef2c692 277 Gene3D G3DSA:3.10.20.10 36 118 7.7E-16 T 22-04-2016 VP1506 ad276f54d1068130e8efc2f42ef2c692 277 PANTHER PTHR30592:SF2 1 277 4.9E-180 T 22-04-2016 VP1506 ad276f54d1068130e8efc2f42ef2c692 277 SUPERFAMILY SSF53927 15 266 2.05E-70 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VP1506 ad276f54d1068130e8efc2f42ef2c692 277 PANTHER PTHR30592 1 277 4.9E-180 T 22-04-2016 VP1027 5edf2477ea35dc7bc6be0b7992c1e197 230 Pfam PF09335 SNARE associated Golgi protein 65 181 4.2E-23 T 22-04-2016 IPR032816 SNARE associated Golgi protein VP1027 5edf2477ea35dc7bc6be0b7992c1e197 230 PANTHER PTHR12677 5 212 4.9E-46 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VP0700 03685f3fd76e8f37538024f85ab02c34 760 SUPERFAMILY SSF48452 83 234 3.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0700 03685f3fd76e8f37538024f85ab02c34 760 SMART SM00028 88 121 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0700 03685f3fd76e8f37538024f85ab02c34 760 SMART SM00028 254 287 27.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0700 03685f3fd76e8f37538024f85ab02c34 760 SMART SM00028 416 449 420.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0700 03685f3fd76e8f37538024f85ab02c34 760 SMART SM00028 334 367 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0700 03685f3fd76e8f37538024f85ab02c34 760 SMART SM00028 294 327 0.054 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VP0700 03685f3fd76e8f37538024f85ab02c34 760 SUPERFAMILY SSF48452 258 454 1.05E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0700 03685f3fd76e8f37538024f85ab02c34 760 Gene3D G3DSA:1.25.40.10 214 456 5.5E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2868 5c97abe1aef16cda845385b6f3aa277f 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 2.3E-35 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted VP2868 5c97abe1aef16cda845385b6f3aa277f 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.1E-33 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted VP0863 2d78ddf0881c98ba2e00ac126c13cd3e 199 Gene3D G3DSA:3.10.180.10 3 198 1.1E-70 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP0863 2d78ddf0881c98ba2e00ac126c13cd3e 199 SUPERFAMILY SSF54593 2 197 7.31E-69 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VP0863 2d78ddf0881c98ba2e00ac126c13cd3e 199 Pfam PF06185 YecM protein 14 196 2.8E-68 T 22-04-2016 IPR010393 Protein of unknown function DUF991 VP0863 2d78ddf0881c98ba2e00ac126c13cd3e 199 PANTHER PTHR37519 4 199 5.3E-84 T 22-04-2016 VP0863 2d78ddf0881c98ba2e00ac126c13cd3e 199 PANTHER PTHR37519:SF1 4 199 5.3E-84 T 22-04-2016 VP0175 5ed789b35073df1d32ce68f66ff29ebe 143 PIRSF PIRSF029598 5 137 5.2E-40 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 VP0175 5ed789b35073df1d32ce68f66ff29ebe 143 Pfam PF06146 Phosphate-starvation-inducible E 53 119 2.7E-13 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VP0175 5ed789b35073df1d32ce68f66ff29ebe 143 PANTHER PTHR37819 4 141 2.0E-21 T 22-04-2016 VP0175 5ed789b35073df1d32ce68f66ff29ebe 143 PANTHER PTHR37819:SF1 4 141 2.0E-21 T 22-04-2016 VP1036 66fdf038edc49c56aa1c456928c1b50d 248 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 17 245 49.633 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VP1036 66fdf038edc49c56aa1c456928c1b50d 248 Pfam PF04288 MukE-like family 17 241 8.0E-118 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VP2315 2dafe22dc75f80d76941867531d18725 185 Gene3D G3DSA:1.10.132.20 67 185 2.8E-45 T 22-04-2016 IPR023584 Ribosome recycling factor domain VP2315 2dafe22dc75f80d76941867531d18725 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.1E-77 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VP2315 2dafe22dc75f80d76941867531d18725 185 Pfam PF01765 Ribosome recycling factor 20 183 2.5E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain VP2315 2dafe22dc75f80d76941867531d18725 185 PANTHER PTHR20982 1 185 6.6E-82 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VP2315 2dafe22dc75f80d76941867531d18725 185 SUPERFAMILY SSF55194 2 184 1.01E-71 T 22-04-2016 IPR023584 Ribosome recycling factor domain VP2315 2dafe22dc75f80d76941867531d18725 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.833 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VP2370 55719a4bd7f15f2c5bebc7aae8fa5ba8 151 Pfam PF11012 Protein of unknown function (DUF2850) 65 142 1.4E-30 T 22-04-2016 IPR021271 Protein of unknown function DUF2850 VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 Gene3D G3DSA:1.10.10.10 15 144 8.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 8.5E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 8.5E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 8.5E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 8.5E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 SMART SM00347 34 134 4.3E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PANTHER PTHR33164 22 144 2.5E-15 T 22-04-2016 VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 Pfam PF01047 MarR family 46 97 4.7E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP1093 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 SUPERFAMILY SSF46785 9 145 2.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP1222 3f463df1aa203d7499f9a819ffdd6310 194 PANTHER PTHR30333:SF1 4 186 1.8E-46 T 22-04-2016 VP1222 3f463df1aa203d7499f9a819ffdd6310 194 PANTHER PTHR30333 4 186 1.8E-46 T 22-04-2016 VP1222 3f463df1aa203d7499f9a819ffdd6310 194 SUPERFAMILY SSF48695 19 181 6.61E-31 T 22-04-2016 IPR011031 Multihaem cytochrome VP1222 3f463df1aa203d7499f9a819ffdd6310 194 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 181 2.0E-55 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VP1222 3f463df1aa203d7499f9a819ffdd6310 194 Gene3D G3DSA:1.10.3820.10 10 180 4.4E-21 T 22-04-2016 VP1222 3f463df1aa203d7499f9a819ffdd6310 194 PIRSF PIRSF000013 1 194 2.3E-80 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VP1370 8915976bc79b2250d7f3bf2b5896e283 95 Gene3D G3DSA:3.30.70.900 3 69 2.5E-12 T 22-04-2016 VP1370 8915976bc79b2250d7f3bf2b5896e283 95 SUPERFAMILY SSF54909 5 81 1.49E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP1370 8915976bc79b2250d7f3bf2b5896e283 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 69 6.4E-6 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VP0383 a10afa30a513697a045f93c132f3f9ae 179 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 44 118 1.3E-8 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin VP1068 09b1e3b290af03c5a93d4ee0ae5e124d 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 192 3.7E-36 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VP1068 09b1e3b290af03c5a93d4ee0ae5e124d 203 SUPERFAMILY SSF101327 15 190 4.58E-34 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VP1068 09b1e3b290af03c5a93d4ee0ae5e124d 203 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 3.6E-56 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VP1804 0adb861d3c9678363e07d704806cd509 130 Gene3D G3DSA:3.10.450.50 5 111 4.6E-15 T 22-04-2016 IPR032710 NTF2-like domain VP1804 0adb861d3c9678363e07d704806cd509 130 SUPERFAMILY SSF54427 4 127 3.76E-32 T 22-04-2016 IPR032710 NTF2-like domain VP1804 0adb861d3c9678363e07d704806cd509 130 Pfam PF12680 SnoaL-like domain 11 105 1.3E-10 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain VP0660 7f421f65a0a13d7e5cbce29959b43f12 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 7.0E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP2250 765f204838c257ecffd979823c886ad3 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 6.0E-29 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VP2250 765f204838c257ecffd979823c886ad3 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.721 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VP2250 765f204838c257ecffd979823c886ad3 103 PANTHER PTHR34653 5 103 2.8E-25 T 22-04-2016 VP2250 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 1.0E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VP2250 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 1.0E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VP2250 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 1.0E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VP2250 765f204838c257ecffd979823c886ad3 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 18 102 1.1E-18 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.2E-30 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.2E-30 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.2E-30 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.2E-30 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 PANTHER PTHR30487 57 283 7.3E-113 T 22-04-2016 VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 PANTHER PTHR30487 1 35 7.3E-113 T 22-04-2016 VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 6.3E-33 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 Pfam PF01478 Type IV leader peptidase family 135 244 4.2E-28 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 PANTHER PTHR30487:SF0 57 283 7.3E-113 T 22-04-2016 VP2526 4fea01a5eb3cbd175b77ce01c1d0cc09 289 PANTHER PTHR30487:SF0 1 35 7.3E-113 T 22-04-2016 VP0447 e3885cf8f858dd87a8ff34071d9b0f9a 196 SUPERFAMILY SSF53697 1 191 1.05E-56 T 22-04-2016 VP0447 e3885cf8f858dd87a8ff34071d9b0f9a 196 PANTHER PTHR30390 1 196 3.2E-119 T 22-04-2016 VP0447 e3885cf8f858dd87a8ff34071d9b0f9a 196 Gene3D G3DSA:3.40.50.10490 2 191 7.7E-59 T 22-04-2016 VP0447 e3885cf8f858dd87a8ff34071d9b0f9a 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.37 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VP0447 e3885cf8f858dd87a8ff34071d9b0f9a 196 Pfam PF13580 SIS domain 9 144 1.7E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VP0447 e3885cf8f858dd87a8ff34071d9b0f9a 196 PANTHER PTHR30390:SF5 1 196 3.2E-119 T 22-04-2016 VP0296 33399694f9042b5e20525a02331b700d 205 SUPERFAMILY SSF52540 25 200 5.31E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0296 33399694f9042b5e20525a02331b700d 205 Pfam PF01583 Adenylylsulphate kinase 31 185 2.2E-70 T 22-04-2016 VP0296 33399694f9042b5e20525a02331b700d 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 197 6.7E-81 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VP0296 33399694f9042b5e20525a02331b700d 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.558 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VP0296 33399694f9042b5e20525a02331b700d 205 Gene3D G3DSA:3.40.50.300 9 204 7.8E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP0296 33399694f9042b5e20525a02331b700d 205 PANTHER PTHR11055 8 204 4.4E-127 T 22-04-2016 VP2826 2bcced54aedd98aa0fae226444dca590 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 467 2.4E-81 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP2826 2bcced54aedd98aa0fae226444dca590 471 PANTHER PTHR10283:SF92 1 74 1.6E-140 T 22-04-2016 VP2826 2bcced54aedd98aa0fae226444dca590 471 PANTHER PTHR10283:SF92 94 464 1.6E-140 T 22-04-2016 VP2826 2bcced54aedd98aa0fae226444dca590 471 PANTHER PTHR10283 1 74 1.6E-140 T 22-04-2016 VP2826 2bcced54aedd98aa0fae226444dca590 471 PANTHER PTHR10283 94 464 1.6E-140 T 22-04-2016 VP2826 2bcced54aedd98aa0fae226444dca590 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 465 7.6E-49 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.795 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 Pfam PF03129 Anticodon binding domain 329 420 7.1E-11 T 22-04-2016 IPR004154 Anticodon-binding VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 SUPERFAMILY SSF52954 327 421 1.54E-26 T 22-04-2016 IPR004154 Anticodon-binding VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 PANTHER PTHR11476:SF9 2 422 6.4E-228 T 22-04-2016 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 6.2E-159 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 PIRSF PIRSF001549 2 422 7.1E-126 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 Gene3D G3DSA:3.30.930.10 221 320 9.9E-100 T 22-04-2016 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 Gene3D G3DSA:3.30.930.10 4 185 9.9E-100 T 22-04-2016 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 SUPERFAMILY SSF55681 5 320 2.79E-104 T 22-04-2016 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 6.1E-46 T 22-04-2016 VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 Gene3D G3DSA:3.40.50.800 327 420 6.2E-31 T 22-04-2016 IPR004154 Anticodon-binding VP0609 7d08b859e5410d77f2b031fc7e6c7d6e 422 PANTHER PTHR11476 2 422 6.4E-228 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 VP2389 b036adc739728008b02d764e30a86b25 315 Gene3D G3DSA:1.20.58.340 240 307 1.0E-17 T 22-04-2016 VP2389 b036adc739728008b02d764e30a86b25 315 Gene3D G3DSA:1.20.58.340 132 225 4.9E-4 T 22-04-2016 VP2389 b036adc739728008b02d764e30a86b25 315 PANTHER PTHR21535 54 311 3.0E-18 T 22-04-2016 VP2389 b036adc739728008b02d764e30a86b25 315 SUPERFAMILY SSF143865 18 236 4.05E-25 T 22-04-2016 VP2389 b036adc739728008b02d764e30a86b25 315 SUPERFAMILY SSF144083 245 306 6.54E-14 T 22-04-2016 VP2389 b036adc739728008b02d764e30a86b25 315 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 5.8E-48 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VP1043 55e7c1eaa96fc018a900f5e94e0f855a 248 SUPERFAMILY SSF50630 107 242 1.03E-41 T 22-04-2016 IPR021109 Aspartic peptidase domain VP1043 55e7c1eaa96fc018a900f5e94e0f855a 248 PANTHER PTHR38037 29 246 2.0E-54 T 22-04-2016 VP1043 55e7c1eaa96fc018a900f5e94e0f855a 248 Gene3D G3DSA:2.40.70.10 106 236 1.0E-47 T 22-04-2016 IPR021109 Aspartic peptidase domain VP1043 55e7c1eaa96fc018a900f5e94e0f855a 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 244 2.2E-47 T 22-04-2016 VP1812 2a6b3975df76e485150ad86fb31b6b69 355 Pfam PF13676 TIR domain 44 151 1.2E-21 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VP1812 2a6b3975df76e485150ad86fb31b6b69 355 SUPERFAMILY SSF52200 41 183 1.24E-23 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VP1812 2a6b3975df76e485150ad86fb31b6b69 355 Gene3D G3DSA:3.40.50.10140 43 151 1.0E-12 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VP1812 2a6b3975df76e485150ad86fb31b6b69 355 SMART SM00255 40 184 1.4E-6 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VP1435 464990b57b6667d6108e9962f8b3340e 447 Pfam PF03616 Sodium/glutamate symporter 8 350 2.7E-13 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VP1546 252494b3f1595f8487059701afb3efbf 393 Pfam PF10442 FIST C domain 223 369 1.4E-18 T 22-04-2016 IPR019494 FIST, C-domain VP1546 252494b3f1595f8487059701afb3efbf 393 PANTHER PTHR40252 12 393 5.3E-101 T 22-04-2016 VP1546 252494b3f1595f8487059701afb3efbf 393 SMART SM00897 28 222 4.6E-32 T 22-04-2016 IPR013702 FIST domain, N-terminal VP1546 252494b3f1595f8487059701afb3efbf 393 Pfam PF08495 FIST N domain 32 221 1.1E-23 T 22-04-2016 IPR013702 FIST domain, N-terminal VP1546 252494b3f1595f8487059701afb3efbf 393 SMART SM01204 223 370 7.2E-28 T 22-04-2016 IPR019494 FIST, C-domain VP1546 252494b3f1595f8487059701afb3efbf 393 PANTHER PTHR40252:SF2 12 393 5.3E-101 T 22-04-2016 VP0434 817b5bdb89ce9db6e0bf271de9de5a39 147 PANTHER PTHR39579 1 138 2.1E-47 T 22-04-2016 VP0434 817b5bdb89ce9db6e0bf271de9de5a39 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 2.1E-47 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 VP0434 817b5bdb89ce9db6e0bf271de9de5a39 147 PIRSF PIRSF006318 1 136 2.6E-57 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 VP0214 6ac01d83a4565237189fdbae77acdc6d 313 Gene3D G3DSA:3.90.25.10 177 294 4.2E-38 T 22-04-2016 VP0214 6ac01d83a4565237189fdbae77acdc6d 313 Gene3D G3DSA:3.40.50.720 2 176 1.6E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0214 6ac01d83a4565237189fdbae77acdc6d 313 SUPERFAMILY SSF51735 1 308 2.15E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0214 6ac01d83a4565237189fdbae77acdc6d 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 55.279 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VP0214 6ac01d83a4565237189fdbae77acdc6d 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.9E-126 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VP0214 6ac01d83a4565237189fdbae77acdc6d 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 5.0E-45 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VP0214 6ac01d83a4565237189fdbae77acdc6d 313 PANTHER PTHR10366 1 308 7.5E-113 T 22-04-2016 VP0214 6ac01d83a4565237189fdbae77acdc6d 313 PANTHER PTHR10366:SF469 1 308 7.5E-113 T 22-04-2016 VP1278 2333fa2a791670ec65b7a0987d51e028 247 Pfam PF07070 SpoOM protein 2 215 4.4E-63 T 22-04-2016 IPR009776 Sporulation stage 0, protein M VP1278 2333fa2a791670ec65b7a0987d51e028 247 PANTHER PTHR40053 1 214 1.2E-50 T 22-04-2016 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 Gene3D G3DSA:3.30.572.10 2 283 8.1E-80 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 PANTHER PTHR11548 2 283 9.0E-108 T 22-04-2016 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 SUPERFAMILY SSF55831 2 283 1.44E-92 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 5.6E-44 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 Pfam PF00303 Thymidylate synthase 2 283 3.0E-76 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.504 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.5E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.5E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.5E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP0524 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.5E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VP1544 c34960897422816e543487de14af2afe 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 2.0E-115 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VP1544 c34960897422816e543487de14af2afe 477 SUPERFAMILY SSF81442 13 467 4.06E-122 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VP1544 c34960897422816e543487de14af2afe 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 1.6E-230 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VP1544 c34960897422816e543487de14af2afe 477 PANTHER PTHR10422 5 468 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VP1544 c34960897422816e543487de14af2afe 477 Gene3D G3DSA:1.20.210.10 12 468 1.4E-70 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VP1544 c34960897422816e543487de14af2afe 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VP1544 c34960897422816e543487de14af2afe 477 PANTHER PTHR10422:SF21 5 468 0.0 T 22-04-2016 VP0226 739611e71d9c37ce3759c44ceefcf4b6 273 Pfam PF00535 Glycosyl transferase family 2 6 171 1.8E-5 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VP0226 739611e71d9c37ce3759c44ceefcf4b6 273 SUPERFAMILY SSF53448 5 142 2.81E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0226 739611e71d9c37ce3759c44ceefcf4b6 273 SUPERFAMILY SSF53448 180 247 2.81E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP0226 739611e71d9c37ce3759c44ceefcf4b6 273 Gene3D G3DSA:3.90.550.10 6 254 1.6E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VP1928 9f7a81b6924437845442ba545c903a1f 192 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 34 180 1.8E-63 T 22-04-2016 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 UniPathway: UPA00045 VP1928 9f7a81b6924437845442ba545c903a1f 192 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 144 180 2.4E-4 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VP1928 9f7a81b6924437845442ba545c903a1f 192 PANTHER PTHR35038 3 179 1.1E-18 T 22-04-2016 VP1928 9f7a81b6924437845442ba545c903a1f 192 Gene3D G3DSA:1.10.3820.10 9 183 1.3E-15 T 22-04-2016 VP1928 9f7a81b6924437845442ba545c903a1f 192 SUPERFAMILY SSF48695 9 182 5.97E-26 T 22-04-2016 IPR011031 Multihaem cytochrome VP0036 765fbfb713c4578a588c748bc1d4b0eb 83 PANTHER PTHR38040 2 82 1.3E-36 T 22-04-2016 VP0036 765fbfb713c4578a588c748bc1d4b0eb 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.8E-27 T 22-04-2016 IPR007475 Membrane fusogenic activity VP0036 765fbfb713c4578a588c748bc1d4b0eb 83 PANTHER PTHR38040:SF1 2 82 1.3E-36 T 22-04-2016 VP1687 c76d76f47912231765706b5835202898 142 Pfam PF05932 Tir chaperone protein (CesT) family 9 112 4.1E-6 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VP1687 c76d76f47912231765706b5835202898 142 SUPERFAMILY SSF69635 4 137 1.36E-28 T 22-04-2016 VP1687 c76d76f47912231765706b5835202898 142 Gene3D G3DSA:3.30.1460.10 5 120 2.3E-24 T 22-04-2016 VP2687 c0df892ac257d570f71c9f16565f7ceb 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2687 c0df892ac257d570f71c9f16565f7ceb 489 Gene3D G3DSA:2.40.50.140 30 128 3.6E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP2687 c0df892ac257d570f71c9f16565f7ceb 489 Pfam PF00575 S1 RNA binding domain 38 109 5.6E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 VP2687 c0df892ac257d570f71c9f16565f7ceb 489 PANTHER PTHR30001 1 489 2.0E-223 T 22-04-2016 VP2687 c0df892ac257d570f71c9f16565f7ceb 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.6E-104 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VP2687 c0df892ac257d570f71c9f16565f7ceb 489 SMART SM00316 37 122 5.8E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 VP2687 c0df892ac257d570f71c9f16565f7ceb 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.1E-173 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VP3076 31d43cb9eb83d115c8349cd45473793b 129 Pfam PF03899 ATP synthase I chain 15 111 5.3E-21 T 22-04-2016 IPR005598 ATP synthase protein I VP1124 50cb4ec36ab5865ec8e72cdef7b35ede 170 Pfam PF11086 Protein of unknown function (DUF2878) 4 150 5.2E-30 T 22-04-2016 IPR021306 Protein of unknown function DUF2878 VP1045 f554ba3c2e200cbc0fe7ad29be70ecd7 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 1.1E-117 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VP1045 f554ba3c2e200cbc0fe7ad29be70ecd7 245 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 6 245 43.199 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VP1045 f554ba3c2e200cbc0fe7ad29be70ecd7 245 SUPERFAMILY SSF53335 23 245 4.03E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1045 f554ba3c2e200cbc0fe7ad29be70ecd7 245 Pfam PF13649 Methyltransferase domain 63 161 1.1E-13 T 22-04-2016 VP1045 f554ba3c2e200cbc0fe7ad29be70ecd7 245 Gene3D G3DSA:3.40.50.150 22 244 5.9E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1045 f554ba3c2e200cbc0fe7ad29be70ecd7 245 PIRSF PIRSF006325 4 245 5.5E-125 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VP1045 f554ba3c2e200cbc0fe7ad29be70ecd7 245 PANTHER PTHR10108:SF809 8 244 1.1E-114 T 22-04-2016 VP1045 f554ba3c2e200cbc0fe7ad29be70ecd7 245 PANTHER PTHR10108 8 244 1.1E-114 T 22-04-2016 VP0583 b9423badd19378efd127b499b12eb38e 544 SUPERFAMILY SSF51645 10 543 5.62E-188 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VP0583 b9423badd19378efd127b499b12eb38e 544 PIRSF PIRSF001363 12 544 6.1E-252 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VP0583 b9423badd19378efd127b499b12eb38e 544 Gene3D G3DSA:1.20.1220.12 425 537 1.8E-37 T 22-04-2016 VP0583 b9423badd19378efd127b499b12eb38e 544 ProSitePatterns PS00510 Malate synthase signature. 277 292 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VP0583 b9423badd19378efd127b499b12eb38e 544 Gene3D G3DSA:3.20.20.360 83 424 2.1E-117 T 22-04-2016 VP0583 b9423badd19378efd127b499b12eb38e 544 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 34 543 3.8E-264 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VP0583 b9423badd19378efd127b499b12eb38e 544 PANTHER PTHR21631:SF1 7 543 1.2E-277 T 22-04-2016 VP0583 b9423badd19378efd127b499b12eb38e 544 Pfam PF01274 Malate synthase 23 543 8.9E-200 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VP0583 b9423badd19378efd127b499b12eb38e 544 PANTHER PTHR21631 7 543 1.2E-277 T 22-04-2016 VP1176 3dea5f375010c0b68b42c0c3587397ec 343 PANTHER PTHR30469:SF10 4 335 1.8E-116 T 22-04-2016 VP1176 3dea5f375010c0b68b42c0c3587397ec 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 3.5E-85 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VP1176 3dea5f375010c0b68b42c0c3587397ec 343 Gene3D G3DSA:2.40.50.100 151 183 1.7E-13 T 22-04-2016 VP1176 3dea5f375010c0b68b42c0c3587397ec 343 Gene3D G3DSA:2.40.50.100 61 90 1.7E-13 T 22-04-2016 VP1176 3dea5f375010c0b68b42c0c3587397ec 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 249 1.4E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VP1176 3dea5f375010c0b68b42c0c3587397ec 343 PANTHER PTHR30469 4 335 1.8E-116 T 22-04-2016 VP1176 3dea5f375010c0b68b42c0c3587397ec 343 SUPERFAMILY SSF111369 47 264 4.84E-33 T 22-04-2016 VP1404 ae1c9b731be4f38b0ae2196886ed196e 154 SUPERFAMILY SSF160719 46 149 1.83E-19 T 22-04-2016 VP1404 ae1c9b731be4f38b0ae2196886ed196e 154 Gene3D G3DSA:3.10.450.40 48 147 2.8E-13 T 22-04-2016 VP1404 ae1c9b731be4f38b0ae2196886ed196e 154 Pfam PF04965 Gene 25-like lysozyme 46 133 2.3E-17 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD VP1404 ae1c9b731be4f38b0ae2196886ed196e 154 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 24 154 8.2E-38 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein VP1198 ad43b7e7aecdda80e9ef8cc55b5264fa 256 Pfam PF02754 Cysteine-rich domain 121 203 4.6E-8 T 22-04-2016 IPR004017 Cysteine-rich domain VP1198 ad43b7e7aecdda80e9ef8cc55b5264fa 256 Pfam PF02754 Cysteine-rich domain 6 85 1.7E-6 T 22-04-2016 IPR004017 Cysteine-rich domain VP1198 ad43b7e7aecdda80e9ef8cc55b5264fa 256 PANTHER PTHR32479 5 203 8.7E-27 T 22-04-2016 VP1198 ad43b7e7aecdda80e9ef8cc55b5264fa 256 PANTHER PTHR32479:SF12 5 203 8.7E-27 T 22-04-2016 VP0105 dcc8e7aa4e5fb90f00f2d7a88bbb3716 142 SUPERFAMILY SSF55729 1 126 3.21E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP0105 dcc8e7aa4e5fb90f00f2d7a88bbb3716 142 Pfam PF00583 Acetyltransferase (GNAT) family 44 120 1.9E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP0105 dcc8e7aa4e5fb90f00f2d7a88bbb3716 142 Gene3D G3DSA:3.40.630.30 2 130 9.6E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1784 4578997d6fe62481b70a2171f26e4f58 93 Pfam PF11695 Domain of unknown function (DUF3291) 3 93 1.0E-32 T 22-04-2016 IPR021708 Domain of unknown function DUF3291 VP1784 4578997d6fe62481b70a2171f26e4f58 93 SUPERFAMILY SSF54909 8 91 3.85E-10 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VP2977 88908ea94952b70a564225a87ecbd338 516 PIRSF PIRSF028175 1 516 0.0 T 22-04-2016 IPR014540 Uncharacterised conserved protein UCP028175 VP2360 6359263b0dc91ab15d79ca8062ca276f 198 PANTHER PTHR23327 6 134 2.4E-17 T 22-04-2016 VP2360 6359263b0dc91ab15d79ca8062ca276f 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 111 2.4E-16 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VP2360 6359263b0dc91ab15d79ca8062ca276f 198 SUPERFAMILY SSF88697 3 189 1.57E-46 T 22-04-2016 IPR015947 PUA-like domain VP2360 6359263b0dc91ab15d79ca8062ca276f 198 SMART SM00464 3 190 4.7E-4 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VP2360 6359263b0dc91ab15d79ca8062ca276f 198 PANTHER PTHR23327:SF0 6 134 2.4E-17 T 22-04-2016 VP0905 bff50088c853712ed6fcddb00f6dbd57 455 PANTHER PTHR32024:SF1 25 455 6.5E-172 T 22-04-2016 VP0905 bff50088c853712ed6fcddb00f6dbd57 455 Pfam PF02386 Cation transport protein 51 437 9.4E-54 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VP0905 bff50088c853712ed6fcddb00f6dbd57 455 PANTHER PTHR32024 25 455 6.5E-172 T 22-04-2016 VP0905 bff50088c853712ed6fcddb00f6dbd57 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 5.5E-127 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VP0946 30c8ee9e99b9eba919ee2d4fd4721067 364 Gene3D G3DSA:3.40.50.1100 145 333 1.1E-35 T 22-04-2016 VP0946 30c8ee9e99b9eba919ee2d4fd4721067 364 PANTHER PTHR10314 6 350 5.4E-203 T 22-04-2016 VP0946 30c8ee9e99b9eba919ee2d4fd4721067 364 SUPERFAMILY SSF53686 23 336 5.5E-71 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP0946 30c8ee9e99b9eba919ee2d4fd4721067 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 2.7E-42 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VP0946 30c8ee9e99b9eba919ee2d4fd4721067 364 PANTHER PTHR10314:SF126 6 350 5.4E-203 T 22-04-2016 VP0946 30c8ee9e99b9eba919ee2d4fd4721067 364 Gene3D G3DSA:3.40.50.1100 48 144 2.1E-24 T 22-04-2016 VP1828 f6072e060c8c743b83acc03f479c4d79 125 Pfam PF04973 Nicotinamide mononucleotide transporter 44 118 2.5E-6 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VP1413 017a73848903c3c71838eb8c289f6101 441 PANTHER PTHR35566:SF1 1 440 1.1E-139 T 22-04-2016 VP1413 017a73848903c3c71838eb8c289f6101 441 PANTHER PTHR35566 1 440 1.1E-139 T 22-04-2016 VP1413 017a73848903c3c71838eb8c289f6101 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 6.6E-153 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 VP1413 017a73848903c3c71838eb8c289f6101 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 2.1E-137 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 VP2576 c2c93ca3c83b26bf1f16020d8e621d53 320 PANTHER PTHR38782:SF1 2 317 3.1E-115 T 22-04-2016 VP2576 c2c93ca3c83b26bf1f16020d8e621d53 320 Pfam PF03888 MucB/RseB N-terminal domain 26 195 3.1E-57 T 22-04-2016 IPR033434 MucB/RseB, N-terminal VP2576 c2c93ca3c83b26bf1f16020d8e621d53 320 Gene3D G3DSA:2.50.20.10 125 184 2.3E-8 T 22-04-2016 VP2576 c2c93ca3c83b26bf1f16020d8e621d53 320 PANTHER PTHR38782 2 317 3.1E-115 T 22-04-2016 VP2576 c2c93ca3c83b26bf1f16020d8e621d53 320 PIRSF PIRSF005427 1 318 1.2E-82 T 22-04-2016 IPR005588 MucB/RseB VP2576 c2c93ca3c83b26bf1f16020d8e621d53 320 Pfam PF17188 MucB/RseB C-terminal domain 218 311 7.0E-28 T 22-04-2016 IPR033436 MucB/RseB, C-terminal VP2522 a9c6c1aceb190467bd4e290b05a71988 295 Gene3D G3DSA:3.90.1170.20 16 149 7.1E-52 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VP2522 a9c6c1aceb190467bd4e290b05a71988 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 6.8E-95 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 VP2522 a9c6c1aceb190467bd4e290b05a71988 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 7.3E-28 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VP2522 a9c6c1aceb190467bd4e290b05a71988 295 SUPERFAMILY SSF54675 15 128 1.26E-33 T 22-04-2016 VP2522 a9c6c1aceb190467bd4e290b05a71988 295 SUPERFAMILY SSF51690 130 294 3.02E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VP2522 a9c6c1aceb190467bd4e290b05a71988 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 4.7E-57 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VP2522 a9c6c1aceb190467bd4e290b05a71988 295 Gene3D G3DSA:3.20.20.70 150 283 7.1E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP2522 a9c6c1aceb190467bd4e290b05a71988 295 PANTHER PTHR32179 1 294 1.4E-129 T 22-04-2016 VP2522 a9c6c1aceb190467bd4e290b05a71988 295 PIRSF PIRSF006250 16 295 2.7E-100 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VP0645 88f77c144bfda689444925dc6a47057e 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 6.7E-31 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain VP0645 88f77c144bfda689444925dc6a47057e 147 PANTHER PTHR12901 1 142 9.0E-66 T 22-04-2016 VP0645 88f77c144bfda689444925dc6a47057e 147 SUPERFAMILY SSF55961 1 143 6.14E-34 T 22-04-2016 VP0645 88f77c144bfda689444925dc6a47057e 147 Gene3D G3DSA:3.30.530.20 1 142 4.4E-47 T 22-04-2016 IPR023393 START-like domain VP0645 88f77c144bfda689444925dc6a47057e 147 PANTHER PTHR12901:SF7 1 142 9.0E-66 T 22-04-2016 VP1843 d69ee96d9980a1b455bee2432d8c1e62 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 6.4E-14 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VP1843 d69ee96d9980a1b455bee2432d8c1e62 92 PANTHER PTHR33755:SF6 1 90 1.9E-39 T 22-04-2016 VP1843 d69ee96d9980a1b455bee2432d8c1e62 92 PANTHER PTHR33755 1 90 1.9E-39 T 22-04-2016 VP1843 d69ee96d9980a1b455bee2432d8c1e62 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 3.9E-17 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VP2612 0b000ecf8ed146ead46e92c4dd81dbaa 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.3E-51 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 VP2612 0b000ecf8ed146ead46e92c4dd81dbaa 187 PANTHER PTHR30327:SF1 1 187 2.4E-69 T 22-04-2016 VP2612 0b000ecf8ed146ead46e92c4dd81dbaa 187 SUPERFAMILY SSF143456 1 187 8.37E-68 T 22-04-2016 VP2612 0b000ecf8ed146ead46e92c4dd81dbaa 187 Gene3D G3DSA:3.30.70.1300 42 130 3.2E-29 T 22-04-2016 VP2612 0b000ecf8ed146ead46e92c4dd81dbaa 187 PANTHER PTHR30327 1 187 2.4E-69 T 22-04-2016 VP2612 0b000ecf8ed146ead46e92c4dd81dbaa 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.625 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 VP2612 0b000ecf8ed146ead46e92c4dd81dbaa 187 Gene3D G3DSA:3.40.1740.10 131 178 2.1E-37 T 22-04-2016 VP2612 0b000ecf8ed146ead46e92c4dd81dbaa 187 Gene3D G3DSA:3.40.1740.10 2 40 2.1E-37 T 22-04-2016 VP1697 b0d83daff5d828271cd21b8bde038528 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 122 1.7E-26 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VP1697 b0d83daff5d828271cd21b8bde038528 142 SUPERFAMILY SSF69635 3 128 1.06E-52 T 22-04-2016 VP1697 b0d83daff5d828271cd21b8bde038528 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 8.0E-65 T 22-04-2016 IPR013353 Type III secretion system chaperone YscB VP1697 b0d83daff5d828271cd21b8bde038528 142 Gene3D G3DSA:3.30.1460.10 3 127 3.1E-4 T 22-04-2016 VP1057 1c7cc9c7c47efeb88f8ae1ec1ebf56ec 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 6.0E-92 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 VP1057 1c7cc9c7c47efeb88f8ae1ec1ebf56ec 232 PANTHER PTHR30625 3 223 5.0E-76 T 22-04-2016 VP1057 1c7cc9c7c47efeb88f8ae1ec1ebf56ec 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 207 2.8E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VP1057 1c7cc9c7c47efeb88f8ae1ec1ebf56ec 232 PANTHER PTHR30625:SF3 3 223 5.0E-76 T 22-04-2016 VP0001 3f84ea9446a3170fb57841738bb26a15 144 PANTHER PTHR19384 2 144 6.0E-29 T 22-04-2016 VP0001 3f84ea9446a3170fb57841738bb26a15 144 Gene3D G3DSA:3.40.50.360 2 142 4.6E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain VP0001 3f84ea9446a3170fb57841738bb26a15 144 Pfam PF00258 Flavodoxin 4 136 7.8E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VP0001 3f84ea9446a3170fb57841738bb26a15 144 PANTHER PTHR19384:SF81 2 144 6.0E-29 T 22-04-2016 VP0001 3f84ea9446a3170fb57841738bb26a15 144 SUPERFAMILY SSF52218 2 142 1.54E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain VP0694 327dfb4b237d84f9e786b2770cdfc6a7 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 2.0E-28 T 22-04-2016 IPR006696 Protein of unknown function DUF423 VP0694 327dfb4b237d84f9e786b2770cdfc6a7 132 PANTHER PTHR10584 6 67 1.0E-15 T 22-04-2016 VP0694 327dfb4b237d84f9e786b2770cdfc6a7 132 PANTHER PTHR10584:SF191 6 67 1.0E-15 T 22-04-2016 VP1563 1ba6084c2fb167285e013cbeeefa26d7 142 Pfam PF12375 Phage protein 55 122 1.3E-24 T 22-04-2016 IPR021077 Bacteriophage phi-Lf, Orf112 VP1311 af1e645ec5e34c41be0fd1ea122460a2 365 PANTHER PTHR30472 28 365 1.0E-157 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VP1311 af1e645ec5e34c41be0fd1ea122460a2 365 Gene3D G3DSA:1.10.3470.10 44 361 1.5E-92 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VP1311 af1e645ec5e34c41be0fd1ea122460a2 365 SUPERFAMILY SSF81345 41 360 1.7E-79 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VP1311 af1e645ec5e34c41be0fd1ea122460a2 365 Pfam PF01032 FecCD transport family 59 360 1.2E-80 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VP1311 af1e645ec5e34c41be0fd1ea122460a2 365 PANTHER PTHR30472:SF29 28 365 1.0E-157 T 22-04-2016 VP1311 af1e645ec5e34c41be0fd1ea122460a2 365 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 37 363 30.403 T 22-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VP1611 8a408560b0d0c1b1610fb02501b63cc8 882 PANTHER PTHR30462 1 881 0.0 T 22-04-2016 VP1611 8a408560b0d0c1b1610fb02501b63cc8 882 PANTHER PTHR30462:SF0 1 881 0.0 T 22-04-2016 VP1611 8a408560b0d0c1b1610fb02501b63cc8 882 Pfam PF02470 MlaD protein 47 138 6.0E-13 T 22-04-2016 IPR003399 Mce/MlaD VP1611 8a408560b0d0c1b1610fb02501b63cc8 882 Pfam PF02470 MlaD protein 398 463 1.0E-5 T 22-04-2016 IPR003399 Mce/MlaD VP1611 8a408560b0d0c1b1610fb02501b63cc8 882 Pfam PF02470 MlaD protein 283 356 7.2E-7 T 22-04-2016 IPR003399 Mce/MlaD VP1611 8a408560b0d0c1b1610fb02501b63cc8 882 Pfam PF02470 MlaD protein 752 820 1.4E-7 T 22-04-2016 IPR003399 Mce/MlaD VP2468 84d786839c5e102e582cf97ffd079494 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 449 1.4E-101 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VP2468 84d786839c5e102e582cf97ffd079494 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 435 3.9E-103 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VP2468 84d786839c5e102e582cf97ffd079494 473 Gene3D G3DSA:3.40.710.10 215 446 9.0E-61 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2468 84d786839c5e102e582cf97ffd079494 473 SUPERFAMILY SSF56601 52 456 7.47E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VP2468 84d786839c5e102e582cf97ffd079494 473 PANTHER PTHR30023:SF0 24 462 4.4E-100 T 22-04-2016 VP2468 84d786839c5e102e582cf97ffd079494 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 5.0E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VP2468 84d786839c5e102e582cf97ffd079494 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 5.0E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VP2468 84d786839c5e102e582cf97ffd079494 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 5.0E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VP2468 84d786839c5e102e582cf97ffd079494 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 347 5.0E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VP2468 84d786839c5e102e582cf97ffd079494 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 274 296 5.0E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VP2468 84d786839c5e102e582cf97ffd079494 473 PANTHER PTHR30023 24 462 4.4E-100 T 22-04-2016 VP2217 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 Gene3D G3DSA:3.40.30.10 10 177 4.4E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2217 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 PANTHER PTHR10681 1 178 5.1E-73 T 22-04-2016 VP2217 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 SUPERFAMILY SSF52833 46 178 2.78E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2217 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VP2217 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 Pfam PF08534 Redoxin 41 164 4.0E-27 T 22-04-2016 IPR013740 Redoxin GO:0016491 VP2217 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 PANTHER PTHR10681:SF107 1 178 5.1E-73 T 22-04-2016 VP2217 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 6.5E-71 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VP1654 4e188d2b6d2df19eb94e4834ad335978 258 Pfam PF01925 Sulfite exporter TauE/SafE 10 251 5.1E-37 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP1654 4e188d2b6d2df19eb94e4834ad335978 258 PANTHER PTHR30269 2 254 3.0E-66 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP1654 4e188d2b6d2df19eb94e4834ad335978 258 PANTHER PTHR30269:SF10 2 254 3.0E-66 T 22-04-2016 VP2432 fe2f38b198042d9f57e486faa01d9a5a 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 1.1E-37 T 22-04-2016 IPR019305 Uncharacterised protein family Smp VP0909 609c47268b66a56e72ee018b1efc1bf8 489 PANTHER PTHR32057 16 489 1.2E-194 T 22-04-2016 VP0909 609c47268b66a56e72ee018b1efc1bf8 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 2.3E-158 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 VP0909 609c47268b66a56e72ee018b1efc1bf8 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 46.023 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 VP1679 0ec5df65b9252681c63f29db997c11ee 210 Gene3D G3DSA:3.40.50.360 51 182 4.4E-14 T 22-04-2016 IPR029039 Flavoprotein-like domain VP1679 0ec5df65b9252681c63f29db997c11ee 210 Pfam PF12682 Flavodoxin 54 155 1.9E-8 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VP1679 0ec5df65b9252681c63f29db997c11ee 210 SUPERFAMILY SSF52218 52 186 2.84E-18 T 22-04-2016 IPR029039 Flavoprotein-like domain VP2966 3b290efba296fc814f83de5da7707fd9 337 Pfam PF01757 Acyltransferase family 7 326 6.6E-30 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 VP2966 3b290efba296fc814f83de5da7707fd9 337 PANTHER PTHR40074 1 336 1.2E-12 T 22-04-2016 VP0815 744aaf46e3703e5d71c18256901d2b16 69 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 56 4.0E-4 T 22-04-2016 VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 Gene3D G3DSA:1.10.860.10 20 122 2.6E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF48024 18 129 4.58E-37 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 Gene3D G3DSA:3.40.50.300 194 457 6.3E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 5.7E-175 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 4.4E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 1.7E-115 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 PANTHER PTHR30153 4 465 4.2E-224 T 22-04-2016 VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF52540 197 268 7.42E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2735 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF52540 295 449 7.42E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1610 c331f72cfec35a1c389971168f910cec 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 9 402 1.1E-105 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 VP1610 c331f72cfec35a1c389971168f910cec 415 PANTHER PTHR30462 6 403 2.2E-183 T 22-04-2016 VP1610 c331f72cfec35a1c389971168f910cec 415 Gene3D G3DSA:3.90.10.10 187 251 1.3E-4 T 22-04-2016 VP1610 c331f72cfec35a1c389971168f910cec 415 PANTHER PTHR30462:SF1 6 403 2.2E-183 T 22-04-2016 VP1610 c331f72cfec35a1c389971168f910cec 415 Pfam PF04403 Paraquat-inducible protein A 54 205 1.9E-36 T 22-04-2016 IPR007498 Paraquat-inducible protein A VP1610 c331f72cfec35a1c389971168f910cec 415 Pfam PF04403 Paraquat-inducible protein A 248 403 1.7E-47 T 22-04-2016 IPR007498 Paraquat-inducible protein A VP1660 3e624fc2d75ff1c82c8794e910b5cd2b 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 94 7.0E-43 T 22-04-2016 IPR009863 Type III secretion protein, LcrG VP1660 3e624fc2d75ff1c82c8794e910b5cd2b 94 Pfam PF07216 LcrG protein 1 94 1.6E-42 T 22-04-2016 IPR009863 Type III secretion protein, LcrG VP1660 3e624fc2d75ff1c82c8794e910b5cd2b 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 94 3.0E-30 T 22-04-2016 IPR009863 Type III secretion protein, LcrG VP1661 071cee715c6581f062355d348b0c16b1 137 Pfam PF09621 Type III secretion system regulator (LcrR) 2 137 2.0E-64 T 22-04-2016 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 VP1661 071cee715c6581f062355d348b0c16b1 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 1 137 3.7E-67 T 22-04-2016 IPR013405 Type III secretion system regulator, LcrR VPA0890 9f29fbb0e364ae857585c27da51d212e 64 Gene3D G3DSA:3.30.465.10 23 64 1.8E-5 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VP2336 1dca48d5b9cbdbf8c07eb378cd9bd7ab 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 2.0E-20 T 22-04-2016 IPR025346 Protein of unknown function DUF4250 VP2117 1a97518ba91496216dddf01cb13dea86 111 Gene3D G3DSA:3.40.30.10 7 102 1.0E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2117 1a97518ba91496216dddf01cb13dea86 111 PANTHER PTHR10293 1 105 4.6E-55 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related VP2117 1a97518ba91496216dddf01cb13dea86 111 PIRSF PIRSF005894 1 107 9.0E-52 T 22-04-2016 IPR014434 Monothiol glutaredoxin VP2117 1a97518ba91496216dddf01cb13dea86 111 SUPERFAMILY SSF52833 1 104 3.67E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold VP2117 1a97518ba91496216dddf01cb13dea86 111 Pfam PF00462 Glutaredoxin 16 80 4.3E-17 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VP2117 1a97518ba91496216dddf01cb13dea86 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.7E-46 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related VP2450 d645fb19423cc264edec720f4219883c 137 PANTHER PTHR33164 10 133 1.8E-21 T 22-04-2016 VP2450 d645fb19423cc264edec720f4219883c 137 Gene3D G3DSA:1.10.10.10 2 135 3.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2450 d645fb19423cc264edec720f4219883c 137 PANTHER PTHR33164:SF16 10 133 1.8E-21 T 22-04-2016 VP2450 d645fb19423cc264edec720f4219883c 137 SUPERFAMILY SSF46785 17 136 8.03E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP2450 d645fb19423cc264edec720f4219883c 137 Pfam PF12802 MarR family 30 88 1.4E-12 T 22-04-2016 VP2450 d645fb19423cc264edec720f4219883c 137 SMART SM00347 23 124 5.9E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP2450 d645fb19423cc264edec720f4219883c 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 7.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP2450 d645fb19423cc264edec720f4219883c 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 7.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP2450 d645fb19423cc264edec720f4219883c 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 7.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP2450 d645fb19423cc264edec720f4219883c 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 7.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VP2276 6ad5deff04bc83d5cfdf43927cea1144 356 PANTHER PTHR21716:SF19 7 352 7.3E-147 T 22-04-2016 VP2276 6ad5deff04bc83d5cfdf43927cea1144 356 PANTHER PTHR21716 7 352 7.3E-147 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VP2276 6ad5deff04bc83d5cfdf43927cea1144 356 Pfam PF01594 Domain of unknown function DUF20 20 345 1.9E-76 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 PANTHER PTHR30330 1 474 1.3E-296 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 1.4E-163 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 Pfam PF01235 Sodium:alanine symporter family 48 453 5.1E-163 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 350 372 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 411 431 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 PANTHER PTHR30330:SF1 1 474 1.3E-296 T 22-04-2016 VP0503 d1f002fea69ac5e15d4583a8a7cd6870 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VP1528 7311a258885d483262b41c7f3fcf891e 286 PANTHER PTHR30193:SF10 4 286 3.1E-126 T 22-04-2016 VP1528 7311a258885d483262b41c7f3fcf891e 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 4.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1528 7311a258885d483262b41c7f3fcf891e 286 SUPERFAMILY SSF161098 10 275 2.49E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1528 7311a258885d483262b41c7f3fcf891e 286 Gene3D G3DSA:1.10.3720.10 7 272 1.8E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP1528 7311a258885d483262b41c7f3fcf891e 286 PANTHER PTHR30193 4 286 3.1E-126 T 22-04-2016 VP1246 be5a9d3bec2edc6a59bede491db6e236 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.2E-38 T 22-04-2016 IPR010352 Protein of unknown function DUF945 VP1878 f148ded0e7a8cd0f83c23f1f44ea8b79 199 Gene3D G3DSA:3.90.79.10 34 195 5.1E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP1878 f148ded0e7a8cd0f83c23f1f44ea8b79 199 PANTHER PTHR12992 37 189 9.0E-47 T 22-04-2016 VP1878 f148ded0e7a8cd0f83c23f1f44ea8b79 199 SUPERFAMILY SSF55811 31 189 9.88E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VP1878 f148ded0e7a8cd0f83c23f1f44ea8b79 199 Pfam PF00293 NUDIX domain 40 161 1.2E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VP1881 f8e0854db4ab9d9942b6e9756b6e9586 571 Gene3D G3DSA:3.20.20.450 358 567 3.0E-41 T 22-04-2016 IPR001633 EAL domain VP1881 f8e0854db4ab9d9942b6e9756b6e9586 571 PANTHER PTHR33121:SF13 359 567 1.5E-32 T 22-04-2016 VP1881 f8e0854db4ab9d9942b6e9756b6e9586 571 SUPERFAMILY SSF141868 356 567 2.22E-45 T 22-04-2016 IPR001633 EAL domain VP1881 f8e0854db4ab9d9942b6e9756b6e9586 571 PANTHER PTHR33121 359 567 1.5E-32 T 22-04-2016 VP1881 f8e0854db4ab9d9942b6e9756b6e9586 571 SMART SM00052 343 571 6.4E-19 T 22-04-2016 IPR001633 EAL domain VP1881 f8e0854db4ab9d9942b6e9756b6e9586 571 Pfam PF00563 EAL domain 358 567 1.2E-38 T 22-04-2016 IPR001633 EAL domain VP0910 ff3b8200d6c032962c5483aa20db062a 332 PIRSF PIRSF006470 1 332 5.4E-124 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VP0910 ff3b8200d6c032962c5483aa20db062a 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 1.6E-104 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VP0910 ff3b8200d6c032962c5483aa20db062a 332 PANTHER PTHR33376:SF7 12 332 4.2E-160 T 22-04-2016 VP0910 ff3b8200d6c032962c5483aa20db062a 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 276 5.6E-80 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VP0910 ff3b8200d6c032962c5483aa20db062a 332 PANTHER PTHR33376 12 332 4.2E-160 T 22-04-2016 VP2175 488bdab535bfb3a9b72ee6787832b3fd 441 PANTHER PTHR35334 12 441 7.3E-260 T 22-04-2016 VP2175 488bdab535bfb3a9b72ee6787832b3fd 441 Pfam PF03222 Tryptophan/tyrosine permease family 40 341 7.8E-5 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VP2175 488bdab535bfb3a9b72ee6787832b3fd 441 PANTHER PTHR35334:SF4 12 441 7.3E-260 T 22-04-2016 VP1720 48bdaa53e7b36f2cbff2684d6ff24c83 128 PANTHER PTHR39289 1 128 7.2E-51 T 22-04-2016 VP1720 48bdaa53e7b36f2cbff2684d6ff24c83 128 PANTHER PTHR39289:SF1 1 128 7.2E-51 T 22-04-2016 VP1720 48bdaa53e7b36f2cbff2684d6ff24c83 128 SUPERFAMILY SSF51182 10 127 7.37E-26 T 22-04-2016 IPR011051 RmlC-like cupin domain VP1720 48bdaa53e7b36f2cbff2684d6ff24c83 128 Gene3D G3DSA:2.60.120.10 13 111 4.0E-17 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VP1720 48bdaa53e7b36f2cbff2684d6ff24c83 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 39.318 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 VP1720 48bdaa53e7b36f2cbff2684d6ff24c83 128 Pfam PF06339 Ectoine synthase 1 127 6.6E-61 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 VP1720 48bdaa53e7b36f2cbff2684d6ff24c83 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 9.0E-59 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 VP2965 c1e2305512c9c0bada635f355a08d822 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 1.9E-24 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 VP2641 7aaa4703672a9664b78020bfd05d599c 159 Pfam PF06271 RDD family 9 149 9.6E-22 T 22-04-2016 IPR010432 RDD VP2641 7aaa4703672a9664b78020bfd05d599c 159 PANTHER PTHR36115 1 157 2.0E-56 T 22-04-2016 VP2641 7aaa4703672a9664b78020bfd05d599c 159 PANTHER PTHR36115:SF2 1 157 2.0E-56 T 22-04-2016 VP2098 f27dd76ae404e2e082d78f9f03a3f607 112 SUPERFAMILY SSF47226 2 110 4.45E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2098 f27dd76ae404e2e082d78f9f03a3f607 112 Gene3D G3DSA:1.20.120.160 2 111 2.7E-28 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2098 f27dd76ae404e2e082d78f9f03a3f607 112 Pfam PF01627 Hpt domain 24 102 6.3E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2954 4152388650525887cd105aa00404d56f 322 Pfam PF02687 FtsX-like permease family 198 317 2.7E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VP2954 4152388650525887cd105aa00404d56f 322 PIRSF PIRSF003097 24 318 9.4E-61 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 VP2240 cb92df075d3936ba76a46028e37abbf4 137 PANTHER PTHR38766:SF1 1 137 2.1E-28 T 22-04-2016 VP2240 cb92df075d3936ba76a46028e37abbf4 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 3.8E-22 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VP2240 cb92df075d3936ba76a46028e37abbf4 137 PANTHER PTHR38766 1 137 2.1E-28 T 22-04-2016 VP2240 cb92df075d3936ba76a46028e37abbf4 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 1.4E-19 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VPA0654 53353797dd8b90f2104abe76ec876350 153 Pfam PF07969 Amidohydrolase family 1 151 5.3E-26 T 22-04-2016 IPR013108 Amidohydrolase 3 VPA0654 53353797dd8b90f2104abe76ec876350 153 PANTHER PTHR22642:SF2 1 137 3.6E-27 T 22-04-2016 VPA0654 53353797dd8b90f2104abe76ec876350 153 PANTHER PTHR22642 1 137 3.6E-27 T 22-04-2016 VP1936 c9275cd6f3d136ec4161d0090725ac83 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 74 2.2E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP1936 c9275cd6f3d136ec4161d0090725ac83 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VP1936 c9275cd6f3d136ec4161d0090725ac83 92 Gene3D G3DSA:3.10.20.30 10 81 6.5E-17 T 22-04-2016 IPR012675 Beta-grasp domain VP1936 c9275cd6f3d136ec4161d0090725ac83 92 SUPERFAMILY SSF54292 3 81 6.55E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VP2042 ef4b614b1a4174a0a13ad5f23110ecb3 196 SUPERFAMILY SSF56925 31 196 2.88E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP2042 ef4b614b1a4174a0a13ad5f23110ecb3 196 Pfam PF13505 Outer membrane protein beta-barrel domain 14 194 9.7E-8 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VP2042 ef4b614b1a4174a0a13ad5f23110ecb3 196 Gene3D G3DSA:2.40.160.20 32 196 8.9E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP2460 01af59fcab5f09ea737b9502c1d2e447 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.6E-25 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VP2460 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.0E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VP2460 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.0E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VP2460 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.0E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VP2460 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.0E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VP2460 01af59fcab5f09ea737b9502c1d2e447 112 PANTHER PTHR34182 2 112 6.0E-29 T 22-04-2016 VP2460 01af59fcab5f09ea737b9502c1d2e447 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 5.5E-22 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VP1443 b3eff9b69b13f60ac8184bbdb7cdc01c 164 Gene3D G3DSA:1.10.3680.10 19 160 4.1E-22 T 22-04-2016 IPR029024 TerB-like VP1443 b3eff9b69b13f60ac8184bbdb7cdc01c 164 SUPERFAMILY SSF158682 19 162 9.16E-28 T 22-04-2016 IPR029024 TerB-like VP1443 b3eff9b69b13f60ac8184bbdb7cdc01c 164 Pfam PF05099 Tellurite resistance protein TerB 29 161 2.5E-37 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VP1886 cbaf63d84dd0210896fa7ac0ec790671 91 SUPERFAMILY SSF143120 13 77 4.58E-9 T 22-04-2016 VP1886 cbaf63d84dd0210896fa7ac0ec790671 91 PANTHER PTHR33713:SF2 1 76 1.1E-16 T 22-04-2016 VP1886 cbaf63d84dd0210896fa7ac0ec790671 91 PANTHER PTHR33713 1 76 1.1E-16 T 22-04-2016 VP1844 461d5a58350d812cac8bd20a54e98c41 133 Gene3D G3DSA:3.40.630.30 6 85 1.9E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1844 461d5a58350d812cac8bd20a54e98c41 133 Pfam PF13527 Acetyltransferase (GNAT) domain 6 83 4.9E-8 T 22-04-2016 VP1844 461d5a58350d812cac8bd20a54e98c41 133 SUPERFAMILY SSF55729 6 94 6.8E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP2527 b8df48dca97c125b41bcb2e154ea98b7 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.989 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VP2527 b8df48dca97c125b41bcb2e154ea98b7 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 184 3.3E-67 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VP2527 b8df48dca97c125b41bcb2e154ea98b7 204 Gene3D G3DSA:3.40.50.300 2 199 1.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2527 b8df48dca97c125b41bcb2e154ea98b7 204 SUPERFAMILY SSF52540 1 193 5.94E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2527 b8df48dca97c125b41bcb2e154ea98b7 204 Pfam PF01121 Dephospho-CoA kinase 3 179 1.5E-72 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VP2527 b8df48dca97c125b41bcb2e154ea98b7 204 PANTHER PTHR10695 1 195 6.1E-79 T 22-04-2016 VP0124 545b52e9b8a8ea89f98bed9e159e83f1 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 9.5E-91 T 22-04-2016 IPR021342 Protein of unknown function DUF2959 VP1901 a88e5cbaa79bf8561363fef29cdc6e27 221 Gene3D G3DSA:2.40.160.20 40 184 5.3E-20 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP1901 a88e5cbaa79bf8561363fef29cdc6e27 221 Pfam PF13505 Outer membrane protein beta-barrel domain 19 183 7.9E-13 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VP1901 a88e5cbaa79bf8561363fef29cdc6e27 221 SUPERFAMILY SSF56925 40 184 1.86E-18 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VP0775 ee34f11cdd92e348a294d92b9d3ca5dc 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 7.5E-28 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VP0775 ee34f11cdd92e348a294d92b9d3ca5dc 131 PIRSF PIRSF002889 1 131 6.2E-32 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VP0775 ee34f11cdd92e348a294d92b9d3ca5dc 131 PANTHER PTHR30435:SF12 2 131 2.7E-43 T 22-04-2016 VP0775 ee34f11cdd92e348a294d92b9d3ca5dc 131 PANTHER PTHR30435 2 131 2.7E-43 T 22-04-2016 VP2281 583f15fb8123d3b3943783e8bc8d0788 147 Pfam PF09842 Predicted membrane protein (DUF2069) 21 123 1.4E-33 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane VP2448 cdbbf39bfe9e615a91a8c30d139c4611 296 PANTHER PTHR30217 5 296 4.0E-195 T 22-04-2016 VP2448 cdbbf39bfe9e615a91a8c30d139c4611 296 PANTHER PTHR30217:SF8 5 296 4.0E-195 T 22-04-2016 VP2448 cdbbf39bfe9e615a91a8c30d139c4611 296 Pfam PF01136 Peptidase family U32 85 241 1.7E-13 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPA1335 8857ff86a9f0197accc1cba003b51a21 77 Gene3D G3DSA:3.40.309.10 3 77 1.4E-12 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPA1335 8857ff86a9f0197accc1cba003b51a21 77 SUPERFAMILY SSF53720 6 76 7.16E-5 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VP0563 0e9d1278d18251e4f9c7a9206755ddcc 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.2E-38 T 22-04-2016 IPR015017 Protein of unknown function DUF1904 VP0563 0e9d1278d18251e4f9c7a9206755ddcc 110 SUPERFAMILY SSF55331 1 110 7.32E-38 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily VP0563 0e9d1278d18251e4f9c7a9206755ddcc 110 Gene3D G3DSA:3.30.429.10 1 110 2.5E-46 T 22-04-2016 VP0480 23bb324d0fcea077ea4a534a20113dbb 142 PIRSF PIRSF026426 1 142 4.8E-50 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 VP0480 23bb324d0fcea077ea4a534a20113dbb 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 135 3.1E-25 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 VP0480 23bb324d0fcea077ea4a534a20113dbb 142 PANTHER PTHR34801 14 138 2.5E-35 T 22-04-2016 VP0197 a736d760a701e869e9b75f5b2c50d34a 396 SUPERFAMILY SSF51735 34 307 2.05E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0197 a736d760a701e869e9b75f5b2c50d34a 396 PANTHER PTHR10366 34 281 1.2E-22 T 22-04-2016 VP0197 a736d760a701e869e9b75f5b2c50d34a 396 PANTHER PTHR10366:SF256 34 281 1.2E-22 T 22-04-2016 VP0197 a736d760a701e869e9b75f5b2c50d34a 396 Gene3D G3DSA:3.40.50.720 33 243 6.5E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VP0197 a736d760a701e869e9b75f5b2c50d34a 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 335 2.2E-44 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VPA0133 561c3df2c98888fc9b50b85acefc2916 316 Pfam PF00672 HAMP domain 162 230 4.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPA0133 561c3df2c98888fc9b50b85acefc2916 316 SUPERFAMILY SSF55073 245 316 1.18E-14 T 22-04-2016 IPR029787 Nucleotide cyclase VPA0133 561c3df2c98888fc9b50b85acefc2916 316 SMART SM00304 181 234 1.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPA0133 561c3df2c98888fc9b50b85acefc2916 316 Gene3D G3DSA:3.30.70.270 242 316 5.5E-16 T 22-04-2016 VPA0133 561c3df2c98888fc9b50b85acefc2916 316 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 239 316 2.3E-12 T 22-04-2016 IPR000160 GGDEF domain VPA0133 561c3df2c98888fc9b50b85acefc2916 316 PANTHER PTHR32089 124 238 1.5E-12 T 22-04-2016 VPA0133 561c3df2c98888fc9b50b85acefc2916 316 SUPERFAMILY SSF158472 182 231 6.15E-9 T 22-04-2016 VPA0133 561c3df2c98888fc9b50b85acefc2916 316 Pfam PF00990 Diguanylate cyclase, GGDEF domain 241 316 1.2E-14 T 22-04-2016 IPR000160 GGDEF domain VPA0133 561c3df2c98888fc9b50b85acefc2916 316 Gene3D G3DSA:3.30.450.20 11 152 7.5E-11 T 22-04-2016 VP1163 054d44b169cc830038585b53ee08f6df 579 PANTHER PTHR22762 161 351 2.4E-18 T 22-04-2016 VP1163 054d44b169cc830038585b53ee08f6df 579 SUPERFAMILY SSF51445 194 530 3.27E-76 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP1163 054d44b169cc830038585b53ee08f6df 579 Gene3D G3DSA:3.20.20.70 187 489 7.0E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VP1163 054d44b169cc830038585b53ee08f6df 579 Pfam PF02065 Melibiase 163 352 1.3E-17 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VP0153 b3d898c1aec2a0c612eec199e381d27c 130 Pfam PF06476 Protein of unknown function (DUF1090) 16 117 3.8E-33 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 VPA1013 f30d8e60725a181b084fc07b322b5e79 39 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 1 38 1.6E-13 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VPA1013 f30d8e60725a181b084fc07b322b5e79 39 SUPERFAMILY SSF55729 1 38 1.38E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1122 1562ca35fb2bee0cde9972922c566bd2 279 PANTHER PTHR33973 6 261 2.0E-69 T 22-04-2016 VP1122 1562ca35fb2bee0cde9972922c566bd2 279 Pfam PF07103 Protein of unknown function (DUF1365) 16 252 3.1E-69 T 22-04-2016 IPR010775 Protein of unknown function DUF1365 VP0705 6147f9921031dff5849e0d9909b6628e 225 PANTHER PTHR30450:SF1 1 225 2.0E-118 T 22-04-2016 VP0705 6147f9921031dff5849e0d9909b6628e 225 PANTHER PTHR30450 1 225 2.0E-118 T 22-04-2016 VP0705 6147f9921031dff5849e0d9909b6628e 225 Gene3D G3DSA:1.10.3720.10 14 224 1.1E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0705 6147f9921031dff5849e0d9909b6628e 225 SUPERFAMILY SSF161098 15 210 4.84E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0705 6147f9921031dff5849e0d9909b6628e 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 8.2E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0995 0f3f2c43b3620ec2ad8519cce104c7ba 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 514 1.2E-264 T 22-04-2016 IPR021794 Protein of unknown function DUF3360 VP1472 b39b7d1ee39c5c898d38d968b8fbe6b3 114 SUPERFAMILY SSF47226 2 106 3.01E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP1472 b39b7d1ee39c5c898d38d968b8fbe6b3 114 Gene3D G3DSA:1.20.120.160 2 106 5.6E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP1472 b39b7d1ee39c5c898d38d968b8fbe6b3 114 Pfam PF01627 Hpt domain 22 97 4.9E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VP2181 36be7e409e5f9e89d04adef3bd540f65 134 PANTHER PTHR35813 1 131 1.3E-41 T 22-04-2016 VP2181 36be7e409e5f9e89d04adef3bd540f65 134 PANTHER PTHR35813:SF1 1 131 1.3E-41 T 22-04-2016 VP2181 36be7e409e5f9e89d04adef3bd540f65 134 PIRSF PIRSF016789 8 129 7.3E-42 T 22-04-2016 IPR007401 Protein of unknown function DUF454 VP2181 36be7e409e5f9e89d04adef3bd540f65 134 Pfam PF04304 Protein of unknown function (DUF454) 9 122 5.0E-38 T 22-04-2016 IPR007401 Protein of unknown function DUF454 VP2247 617f02de32ef1dcff9b7879e6eb8aaa2 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 5.5E-36 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VP2247 617f02de32ef1dcff9b7879e6eb8aaa2 266 PANTHER PTHR34982 1 266 2.1E-72 T 22-04-2016 VP2247 617f02de32ef1dcff9b7879e6eb8aaa2 266 PRINTS PR01003 Flagellar assembly protein FliH signature 104 122 6.7E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VP2247 617f02de32ef1dcff9b7879e6eb8aaa2 266 PRINTS PR01003 Flagellar assembly protein FliH signature 81 103 6.7E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VP2247 617f02de32ef1dcff9b7879e6eb8aaa2 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 6.7E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VP2247 617f02de32ef1dcff9b7879e6eb8aaa2 266 PANTHER PTHR34982:SF1 1 266 2.1E-72 T 22-04-2016 VPA0886 c7fd4dd0eca01316b75df22810e0e9d6 329 Pfam PF04820 Tryptophan halogenase 76 300 1.6E-9 T 22-04-2016 IPR006905 Tryptophan halogenase VPA0886 c7fd4dd0eca01316b75df22810e0e9d6 329 Pfam PF04820 Tryptophan halogenase 5 56 1.7E-5 T 22-04-2016 IPR006905 Tryptophan halogenase VPA0886 c7fd4dd0eca01316b75df22810e0e9d6 329 SUPERFAMILY SSF51905 3 151 2.31E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPA0886 c7fd4dd0eca01316b75df22810e0e9d6 329 SUPERFAMILY SSF51905 261 321 2.31E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPA0886 c7fd4dd0eca01316b75df22810e0e9d6 329 PANTHER PTHR10617:SF113 3 320 1.0E-98 T 22-04-2016 VPA0886 c7fd4dd0eca01316b75df22810e0e9d6 329 Gene3D G3DSA:3.50.50.60 3 156 9.7E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPA0886 c7fd4dd0eca01316b75df22810e0e9d6 329 Gene3D G3DSA:3.50.50.60 257 300 9.7E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPA0886 c7fd4dd0eca01316b75df22810e0e9d6 329 PANTHER PTHR10617 3 320 1.0E-98 T 22-04-2016 VP1509 5a4e8e5a523ed3cfcf8f73833e4d4cf3 209 Pfam PF11748 Protein of unknown function (DUF3306) 4 120 7.6E-28 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 VP0194 f12b0b4c5176f61a08adf4accf7ecce1 351 SUPERFAMILY SSF53756 9 343 4.39E-79 T 22-04-2016 VP0194 f12b0b4c5176f61a08adf4accf7ecce1 351 PANTHER PTHR30160 1 347 8.9E-142 T 22-04-2016 VP0194 f12b0b4c5176f61a08adf4accf7ecce1 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 309 4.3E-52 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VP0194 f12b0b4c5176f61a08adf4accf7ecce1 351 Gene3D G3DSA:3.40.50.2000 162 344 4.1E-45 T 22-04-2016 VP0194 f12b0b4c5176f61a08adf4accf7ecce1 351 Gene3D G3DSA:3.40.50.2000 11 151 2.1E-22 T 22-04-2016 VP0194 f12b0b4c5176f61a08adf4accf7ecce1 351 PANTHER PTHR30160:SF12 1 347 8.9E-142 T 22-04-2016 VP1803 1bfbecba674e7d3317d9099a570a8cd1 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 6.8E-16 T 22-04-2016 IPR021681 Protein of unknown function DUF3265 VP1723 2891fd69c584436cab0629f361398c49 553 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 2.5E-170 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VP1723 2891fd69c584436cab0629f361398c49 553 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 2.0E-134 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VP1723 2891fd69c584436cab0629f361398c49 553 PANTHER PTHR30047 13 543 1.8E-200 T 22-04-2016 VP1723 2891fd69c584436cab0629f361398c49 553 PANTHER PTHR30047:SF2 13 543 1.8E-200 T 22-04-2016 VP2955 dbcc22f39d7fc94a38c4506c3cd5a524 224 Pfam PF00005 ABC transporter 18 165 2.4E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VP2955 dbcc22f39d7fc94a38c4506c3cd5a524 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VP2955 dbcc22f39d7fc94a38c4506c3cd5a524 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.5E-90 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VP2955 dbcc22f39d7fc94a38c4506c3cd5a524 224 Gene3D G3DSA:3.40.50.300 1 201 2.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2955 dbcc22f39d7fc94a38c4506c3cd5a524 224 PANTHER PTHR24220 3 221 3.5E-117 T 22-04-2016 VP2955 dbcc22f39d7fc94a38c4506c3cd5a524 224 SMART SM00382 27 215 5.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VP2955 dbcc22f39d7fc94a38c4506c3cd5a524 224 SUPERFAMILY SSF52540 1 220 5.87E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2955 dbcc22f39d7fc94a38c4506c3cd5a524 224 PANTHER PTHR24220:SF470 3 221 3.5E-117 T 22-04-2016 VP0246 8fc5b476d2c98a679fed3aaca576a447 80 Pfam PF06005 Protein of unknown function (DUF904) 1 78 2.3E-25 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VP0246 8fc5b476d2c98a679fed3aaca576a447 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.826 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VPA1587 b6910e3333a0c3683a6fbf48107a8f15 150 Gene3D G3DSA:3.10.129.10 3 149 1.2E-54 T 22-04-2016 IPR029069 HotDog domain VPA1587 b6910e3333a0c3683a6fbf48107a8f15 150 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 2 150 6.1E-84 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPA1587 b6910e3333a0c3683a6fbf48107a8f15 150 SUPERFAMILY SSF54637 2 150 3.03E-53 T 22-04-2016 IPR029069 HotDog domain VPA1587 b6910e3333a0c3683a6fbf48107a8f15 150 Pfam PF07977 FabA-like domain 13 142 1.8E-54 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VP0965 282c062f2d8cca5b955d1d7ab1f0f171 465 Gene3D G3DSA:1.25.40.10 207 265 3.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0965 282c062f2d8cca5b955d1d7ab1f0f171 465 Gene3D G3DSA:1.25.40.10 131 163 3.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0965 282c062f2d8cca5b955d1d7ab1f0f171 465 Gene3D G3DSA:1.25.40.10 67 99 3.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0965 282c062f2d8cca5b955d1d7ab1f0f171 465 SUPERFAMILY SSF48452 67 160 8.43E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0965 282c062f2d8cca5b955d1d7ab1f0f171 465 SUPERFAMILY SSF48452 204 259 8.43E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP2665 4abbb43ad4f9138fbc24759a92c25f91 321 PANTHER PTHR10846 5 316 2.9E-76 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VP2665 4abbb43ad4f9138fbc24759a92c25f91 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 5.9E-29 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VP2665 4abbb43ad4f9138fbc24759a92c25f91 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 5.0E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VP2665 4abbb43ad4f9138fbc24759a92c25f91 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.4E-83 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VP1484 19551a27bd6366571d66463f5758e7ad 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 1.5E-43 T 22-04-2016 IPR020979 Uncharacterised protein family A0KLC6 VP1204 2fa30451e815fc33bfb1f7bcb33b56b8 82 PANTHER PTHR35175 1 78 7.2E-41 T 22-04-2016 VP1204 2fa30451e815fc33bfb1f7bcb33b56b8 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 7.0E-18 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 VP1204 2fa30451e815fc33bfb1f7bcb33b56b8 82 PANTHER PTHR35175:SF1 1 78 7.2E-41 T 22-04-2016 VP2784 b3dd2d9a62014cc6d3b308f343ab759e 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 4.4E-33 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VP2784 b3dd2d9a62014cc6d3b308f343ab759e 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 5.4E-21 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VP2724 c25cd1a1992cc58c76109638cfc90b2d 219 Pfam PF13505 Outer membrane protein beta-barrel domain 9 219 3.4E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VP2724 c25cd1a1992cc58c76109638cfc90b2d 219 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 5 219 1.4E-54 T 22-04-2016 IPR026387 Outer membrane protein VP1918 24b4b4ecc79de08bc712824876839a4f 345 Pfam PF09375 Imelysin 48 324 1.8E-42 T 22-04-2016 VP1938 326d7dddab0214131095ec18cf7fec63 326 Pfam PF13084 Domain of unknown function (DUF3943) 163 272 1.8E-37 T 22-04-2016 IPR025079 Domain of unknown function DUF3943 VP0901 7e66c70b81896be5a0d2f86218fb574b 246 SUPERFAMILY SSF53955 21 193 7.5E-13 T 22-04-2016 IPR023346 Lysozyme-like domain VP0901 7e66c70b81896be5a0d2f86218fb574b 246 Gene3D G3DSA:1.10.530.10 87 177 3.5E-8 T 22-04-2016 VP2835 57157c163008d12277e6cfeb6b37d92b 318 SUPERFAMILY SSF64182 5 317 1.44E-44 T 22-04-2016 VP2835 57157c163008d12277e6cfeb6b37d92b 318 Pfam PF02272 DHHA1 domain 256 314 5.6E-5 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VP1882 efab170fd50411f924b882ba54555a23 192 Pfam PF00583 Acetyltransferase (GNAT) family 99 171 2.2E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VP1882 efab170fd50411f924b882ba54555a23 192 Gene3D G3DSA:3.40.630.30 36 188 2.9E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1882 efab170fd50411f924b882ba54555a23 192 SUPERFAMILY SSF55729 38 188 2.52E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VP1652 3491a3f1194f5d0c13bb2727710ebcfd 166 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 22 157 3.7E-16 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 VP1667 2997616f078966bec2d81d169295da57 297 SUPERFAMILY SSF140591 75 272 7.06E-51 T 22-04-2016 VP1667 2997616f078966bec2d81d169295da57 297 Pfam PF07201 HrpJ-like domain 60 226 2.0E-36 T 22-04-2016 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 VP1667 2997616f078966bec2d81d169295da57 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 1.4E-84 T 22-04-2016 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 VP2060 c71a7d9b78e9f31cc832fc19af219dbb 193 PANTHER PTHR11746 124 193 3.1E-29 T 22-04-2016 VP2060 c71a7d9b78e9f31cc832fc19af219dbb 193 Gene3D G3DSA:3.90.950.10 4 190 9.3E-54 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VP2060 c71a7d9b78e9f31cc832fc19af219dbb 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.701 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VP2060 c71a7d9b78e9f31cc832fc19af219dbb 193 PIRSF PIRSF006305 1 193 1.9E-44 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VP2060 c71a7d9b78e9f31cc832fc19af219dbb 193 Pfam PF02545 Maf-like protein 5 187 1.8E-44 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VP2060 c71a7d9b78e9f31cc832fc19af219dbb 193 SUPERFAMILY SSF52972 1 187 4.64E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VP2060 c71a7d9b78e9f31cc832fc19af219dbb 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 186 3.3E-51 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VP2060 c71a7d9b78e9f31cc832fc19af219dbb 193 PANTHER PTHR11746:SF102 124 193 3.1E-29 T 22-04-2016 VP2985 72c76b5bcc047186906099d33f9202e3 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 1.7E-9 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site VP1118 954203f9e8fee6c1e20c1a08284edf28 287 PANTHER PTHR10120 1 286 2.0E-100 T 22-04-2016 VP1118 954203f9e8fee6c1e20c1a08284edf28 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 24.997 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VP1118 954203f9e8fee6c1e20c1a08284edf28 287 Gene3D G3DSA:3.30.2010.10 73 160 1.5E-32 T 22-04-2016 VP1118 954203f9e8fee6c1e20c1a08284edf28 287 Pfam PF01435 Peptidase family M48 78 286 9.6E-40 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VP1118 954203f9e8fee6c1e20c1a08284edf28 287 PANTHER PTHR10120:SF19 1 286 2.0E-100 T 22-04-2016 VP2849 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.2E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VP2849 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.2E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VP2849 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.2E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VP2849 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.2E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VP2849 970b2569037946ba84462e7e18ff496e 165 Pfam PF02308 MgtC family 19 141 7.0E-28 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VP2849 970b2569037946ba84462e7e18ff496e 165 PANTHER PTHR33778 26 143 1.8E-24 T 22-04-2016 VP0950 b5f00cc08e6763c983f26c33f415e1a8 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 136 6.1E-44 T 22-04-2016 VP0950 b5f00cc08e6763c983f26c33f415e1a8 144 PANTHER PTHR38013 1 144 2.6E-45 T 22-04-2016 VP2791 6a68258dd360900e3de200587d67c130 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.637 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VP2791 6a68258dd360900e3de200587d67c130 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 7.6E-34 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VP2791 6a68258dd360900e3de200587d67c130 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 53 4.0E-24 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VP2791 6a68258dd360900e3de200587d67c130 70 SUPERFAMILY SSF118001 1 69 4.97E-28 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VP2791 6a68258dd360900e3de200587d67c130 70 Gene3D G3DSA:1.10.10.610 1 70 1.1E-35 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VP2791 6a68258dd360900e3de200587d67c130 70 PIRSF PIRSF006169 1 70 5.7E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VP2216 1e3e613abe17e38b1667cf42f630872c 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 7.0E-55 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family VP2216 1e3e613abe17e38b1667cf42f630872c 161 PANTHER PTHR30009 12 138 6.7E-37 T 22-04-2016 VP2216 1e3e613abe17e38b1667cf42f630872c 161 PANTHER PTHR30009:SF6 12 138 6.7E-37 T 22-04-2016 VP0575 d29c590c15eae221680e63b497018a9b 557 SUPERFAMILY SSF161098 283 538 1.96E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0575 d29c590c15eae221680e63b497018a9b 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 4.1E-76 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VP0575 d29c590c15eae221680e63b497018a9b 557 Gene3D G3DSA:1.10.3720.10 24 43 1.3E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0575 d29c590c15eae221680e63b497018a9b 557 Gene3D G3DSA:1.10.3720.10 283 552 1.3E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0575 d29c590c15eae221680e63b497018a9b 557 PANTHER PTHR30425:SF7 196 554 1.4E-242 T 22-04-2016 VP0575 d29c590c15eae221680e63b497018a9b 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 1.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VP0575 d29c590c15eae221680e63b497018a9b 557 PANTHER PTHR30425 196 554 1.4E-242 T 22-04-2016 VP0804 a373d25e46566c94c9911956200aa217 153 PANTHER PTHR33507:SF3 2 153 2.8E-43 T 22-04-2016 VP0804 a373d25e46566c94c9911956200aa217 153 SUPERFAMILY SSF141322 113 151 1.31E-5 T 22-04-2016 VP0804 a373d25e46566c94c9911956200aa217 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 150 7.6E-26 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain VP0804 a373d25e46566c94c9911956200aa217 153 Gene3D G3DSA:2.40.50.140 95 151 4.0E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VP0804 a373d25e46566c94c9911956200aa217 153 PANTHER PTHR33507 2 153 2.8E-43 T 22-04-2016 VP1542 487df863603d25f7619264723d3ac43e 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 4.2E-10 T 22-04-2016 IPR008621 Cbb3-type cytochrome oxidase component VP1155 7484b348fb216eea50ddc040cdfef24c 140 PANTHER PTHR42641:SF2 5 127 4.5E-29 T 22-04-2016 VP1155 7484b348fb216eea50ddc040cdfef24c 140 Pfam PF05232 Chlorhexidine efflux transporter 69 131 5.7E-21 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter VP1155 7484b348fb216eea50ddc040cdfef24c 140 Pfam PF05232 Chlorhexidine efflux transporter 1 63 7.7E-24 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter VP1155 7484b348fb216eea50ddc040cdfef24c 140 PANTHER PTHR42641 5 127 4.5E-29 T 22-04-2016 VP0647 e309a2f0dffa1ce907f4846e7e75063c 119 Pfam PF04355 SmpA / OmlA family 35 103 1.9E-25 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VP0647 e309a2f0dffa1ce907f4846e7e75063c 119 PANTHER PTHR37482:SF1 1 118 1.9E-47 T 22-04-2016 VP0647 e309a2f0dffa1ce907f4846e7e75063c 119 PANTHER PTHR37482 1 118 1.9E-47 T 22-04-2016 VP0647 e309a2f0dffa1ce907f4846e7e75063c 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.306 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE VP2494 5d02263e9b1b80c210b1bd044c206f7d 122 PIRSF PIRSF006287 1 122 2.3E-49 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VP2494 5d02263e9b1b80c210b1bd044c206f7d 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.944 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VP2494 5d02263e9b1b80c210b1bd044c206f7d 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 7.0E-42 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VP2494 5d02263e9b1b80c210b1bd044c206f7d 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 3.0E-66 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VP0818 0bf7a93fa608c59afdeb50295a75e5e7 251 PANTHER PTHR30269 1 251 8.1E-29 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP0818 0bf7a93fa608c59afdeb50295a75e5e7 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 2.2E-34 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VP2958 939c57eead5e687c6aab431a8901aa0c 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 1.8E-18 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 VP2958 939c57eead5e687c6aab431a8901aa0c 88 PANTHER PTHR38775:SF1 2 88 1.6E-26 T 22-04-2016 VP2958 939c57eead5e687c6aab431a8901aa0c 88 PANTHER PTHR38775 2 88 1.6E-26 T 22-04-2016 VP0019 2d4446d247bc4520f2dfaeefb2f2ed98 417 Pfam PF00155 Aminotransferase class I and II 67 401 3.5E-27 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VP0019 2d4446d247bc4520f2dfaeefb2f2ed98 417 Gene3D G3DSA:3.40.640.10 53 266 3.6E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VP0019 2d4446d247bc4520f2dfaeefb2f2ed98 417 PANTHER PTHR11751:SF419 11 415 1.0E-181 T 22-04-2016 VP0019 2d4446d247bc4520f2dfaeefb2f2ed98 417 SUPERFAMILY SSF53383 13 411 1.08E-61 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VP0019 2d4446d247bc4520f2dfaeefb2f2ed98 417 PANTHER PTHR11751 11 415 1.0E-181 T 22-04-2016 VP0019 2d4446d247bc4520f2dfaeefb2f2ed98 417 Gene3D G3DSA:3.90.1150.10 267 410 3.8E-16 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPA1226 179df8f9998813f0c3adadd280084625 104 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 2 104 8.3E-42 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPA1226 179df8f9998813f0c3adadd280084625 104 PANTHER PTHR37480 1 104 1.8E-55 T 22-04-2016 VP2990 161f1c142f6db141a2d9fed80ca5034f 403 PANTHER PTHR38043 25 392 2.2E-85 T 22-04-2016 VP2990 161f1c142f6db141a2d9fed80ca5034f 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 7.8E-108 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VP1440 224a9e1e4238cb7e119dcc21fe3b2554 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 2.0E-54 T 22-04-2016 IPR021212 Domain of unknown function DUF2760 VP0857 4db0df5d0e9eac2bdf71233d0efc5e29 75 SMART SM00899 1 74 5.6E-24 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VP0857 4db0df5d0e9eac2bdf71233d0efc5e29 75 Pfam PF04023 FeoA domain 1 74 2.5E-19 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VP0857 4db0df5d0e9eac2bdf71233d0efc5e29 75 PANTHER PTHR33238 1 75 1.9E-23 T 22-04-2016 VP0857 4db0df5d0e9eac2bdf71233d0efc5e29 75 SUPERFAMILY SSF50037 4 74 2.52E-19 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal VP0985 c8f6de4be4fd3f98fc420e412257c871 519 Pfam PF04293 SpoVR like protein 26 456 3.7E-178 T 22-04-2016 IPR007390 Sporulation stage V, protein R VP0985 c8f6de4be4fd3f98fc420e412257c871 519 PANTHER PTHR30029:SF2 16 519 2.6E-240 T 22-04-2016 VP0985 c8f6de4be4fd3f98fc420e412257c871 519 PANTHER PTHR30029 16 519 2.6E-240 T 22-04-2016 VP1422 30b60e83cc7fe23a89e92e5f75261e5a 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.4E-21 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VP1422 30b60e83cc7fe23a89e92e5f75261e5a 200 SUPERFAMILY SSF51197 3 81 5.63E-5 T 22-04-2016 VP1422 30b60e83cc7fe23a89e92e5f75261e5a 200 SMART SM00702 11 187 5.2E-35 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VP1422 30b60e83cc7fe23a89e92e5f75261e5a 200 PANTHER PTHR12907 1 192 1.5E-62 T 22-04-2016 VP1422 30b60e83cc7fe23a89e92e5f75261e5a 200 PANTHER PTHR12907:SF14 1 192 1.5E-62 T 22-04-2016 VP1013 3109353adb177334ae28df691baef6cb 106 PANTHER PTHR33473 1 106 3.1E-40 T 22-04-2016 VP1013 3109353adb177334ae28df691baef6cb 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 28.073 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VP1013 3109353adb177334ae28df691baef6cb 106 Gene3D G3DSA:3.30.1390.10 4 106 5.0E-45 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VP1013 3109353adb177334ae28df691baef6cb 106 SUPERFAMILY SSF54736 21 105 6.28E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VP1013 3109353adb177334ae28df691baef6cb 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 2.1E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 VP2685 4a2a3066b88b05829ecc0bb18a91dd5b 273 Gene3D G3DSA:3.60.110.10 3 266 1.6E-82 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP2685 4a2a3066b88b05829ecc0bb18a91dd5b 273 SUPERFAMILY SSF56317 3 263 1.57E-79 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP2685 4a2a3066b88b05829ecc0bb18a91dd5b 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site VP2685 4a2a3066b88b05829ecc0bb18a91dd5b 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 1.2E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VP2685 4a2a3066b88b05829ecc0bb18a91dd5b 273 PANTHER PTHR23088 3 272 3.8E-104 T 22-04-2016 VP2685 4a2a3066b88b05829ecc0bb18a91dd5b 273 PANTHER PTHR23088:SF27 3 272 3.8E-104 T 22-04-2016 VP0770 34f0fcbe032abb72ff45ba725fd6ce3f 141 Gene3D G3DSA:1.20.58.300 1 113 1.2E-22 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VP0770 34f0fcbe032abb72ff45ba725fd6ce3f 141 SUPERFAMILY SSF140566 1 113 1.57E-23 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VP0770 34f0fcbe032abb72ff45ba725fd6ce3f 141 Pfam PF05130 FlgN protein 2 131 6.4E-26 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VP2142 5764a010bce47c565f525f53ec313ceb 835 Gene3D G3DSA:3.40.50.300 540 697 1.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2142 5764a010bce47c565f525f53ec313ceb 835 SUPERFAMILY SSF52540 524 721 2.66E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2142 5764a010bce47c565f525f53ec313ceb 835 Pfam PF07728 AAA domain (dynein-related subfamily) 531 683 5.9E-5 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VP2142 5764a010bce47c565f525f53ec313ceb 835 Gene3D G3DSA:3.40.50.300 497 539 2.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2142 5764a010bce47c565f525f53ec313ceb 835 SMART SM00382 526 698 1.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VP0221 0e2cc07a1cf79cb8673b88a400626400 330 Pfam PF02706 Chain length determinant protein 23 217 3.3E-27 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VP0221 0e2cc07a1cf79cb8673b88a400626400 330 PANTHER PTHR32309 2 246 1.7E-29 T 22-04-2016 VP0221 0e2cc07a1cf79cb8673b88a400626400 330 Pfam PF13807 G-rich domain on putative tyrosine kinase 251 315 1.7E-9 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain VPA0463 53b0bda2bfab0fff73940092534b6d20 97 PANTHER PTHR23135:SF3 1 87 2.1E-23 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPA0463 53b0bda2bfab0fff73940092534b6d20 97 Gene3D G3DSA:3.90.190.20 1 96 1.2E-29 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPA0463 53b0bda2bfab0fff73940092534b6d20 97 Pfam PF02875 Mur ligase family, glutamate ligase domain 1 78 6.4E-13 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPA0463 53b0bda2bfab0fff73940092534b6d20 97 PANTHER PTHR23135 1 87 2.1E-23 T 22-04-2016 VPA0463 53b0bda2bfab0fff73940092534b6d20 97 SUPERFAMILY SSF53244 1 94 8.93E-27 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPA1317 289d8592541eef8656f35ebd098a5113 50 Pfam PF07209 Protein of unknown function (DUF1415) 2 48 5.4E-15 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 VP2199 4873e4eb32ee3daca5435a0f3d33135e 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 1.0E-72 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- VPA1293 589d6f0ea2cc135f4010e73c928ee66a 157 Gene3D G3DSA:3.50.40.10 40 157 7.9E-51 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VPA1293 589d6f0ea2cc135f4010e73c928ee66a 157 Pfam PF03483 B3/4 domain 54 157 1.2E-41 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VPA1293 589d6f0ea2cc135f4010e73c928ee66a 157 SUPERFAMILY SSF56037 38 157 6.8E-46 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VPA1293 589d6f0ea2cc135f4010e73c928ee66a 157 PANTHER PTHR10947 1 157 4.5E-62 T 22-04-2016 VPA1293 589d6f0ea2cc135f4010e73c928ee66a 157 SMART SM00873 54 157 6.7E-30 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VPA1293 589d6f0ea2cc135f4010e73c928ee66a 157 PANTHER PTHR10947:SF0 1 157 4.5E-62 T 22-04-2016 VPA1293 589d6f0ea2cc135f4010e73c928ee66a 157 Gene3D G3DSA:3.30.56.10 1 26 9.8E-7 T 22-04-2016 VP0501 a1a792c641e0afd3a0884054ee2d94ea 189 Gene3D G3DSA:1.20.120.520 8 155 1.0E-15 T 22-04-2016 VP0501 a1a792c641e0afd3a0884054ee2d94ea 189 Pfam PF01814 Hemerythrin HHE cation binding domain 8 141 1.7E-15 T 22-04-2016 IPR012312 Haemerythrin-like VP1847 659be220fcbd3e0ab15ae6b481289e0e 152 PANTHER PTHR39176 54 152 3.7E-12 T 22-04-2016 VP1847 659be220fcbd3e0ab15ae6b481289e0e 152 Pfam PF07007 Protein of unknown function (DUF1311) 54 144 6.8E-17 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 VP1847 659be220fcbd3e0ab15ae6b481289e0e 152 PANTHER PTHR39176:SF1 54 152 3.7E-12 T 22-04-2016 VPA0303 7d79ec005f03cd0d273b3167448e303d 246 PANTHER PTHR36985 1 245 4.3E-32 T 22-04-2016 VP1434 aa45045a27a234ad6ca60240439998aa 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 23 2.5E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP1434 aa45045a27a234ad6ca60240439998aa 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.4E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VP1434 aa45045a27a234ad6ca60240439998aa 163 SUPERFAMILY SSF54523 7 146 7.85E-11 T 22-04-2016 VP1434 aa45045a27a234ad6ca60240439998aa 163 Gene3D G3DSA:3.30.700.10 7 72 9.9E-5 T 22-04-2016 VP1434 aa45045a27a234ad6ca60240439998aa 163 PANTHER PTHR30093:SF7 5 59 1.4E-15 T 22-04-2016 VP1434 aa45045a27a234ad6ca60240439998aa 163 PANTHER PTHR30093 5 59 1.4E-15 T 22-04-2016 VP0537 b60225e5ab628f96667f1f430872c8fc 317 Pfam PF02401 LytB protein 3 284 2.0E-92 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VP0537 b60225e5ab628f96667f1f430872c8fc 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.08 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VP0537 b60225e5ab628f96667f1f430872c8fc 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 2.0E-98 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VP0537 b60225e5ab628f96667f1f430872c8fc 317 PANTHER PTHR30426 1 313 5.0E-160 T 22-04-2016 VP0507 91df932693fb31361c914edc2ea27091 437 PANTHER PTHR30588 2 437 6.5E-202 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VP0507 91df932693fb31361c914edc2ea27091 437 PANTHER PTHR30588:SF0 2 437 6.5E-202 T 22-04-2016 VP0507 91df932693fb31361c914edc2ea27091 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 2.9E-133 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VP0507 91df932693fb31361c914edc2ea27091 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 1.1E-150 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VP2811 43dfe7a854aa0cc6db511f8d9b400096 211 SUPERFAMILY SSF81901 64 178 3.92E-22 T 22-04-2016 VP2811 43dfe7a854aa0cc6db511f8d9b400096 211 Pfam PF08238 Sel1 repeat 74 106 0.011 T 22-04-2016 IPR006597 Sel1-like repeat VP2811 43dfe7a854aa0cc6db511f8d9b400096 211 Pfam PF08238 Sel1 repeat 109 143 1.3E-4 T 22-04-2016 IPR006597 Sel1-like repeat VP2811 43dfe7a854aa0cc6db511f8d9b400096 211 SMART SM00671 144 179 22.0 T 22-04-2016 IPR006597 Sel1-like repeat VP2811 43dfe7a854aa0cc6db511f8d9b400096 211 SMART SM00671 108 143 3.2E-5 T 22-04-2016 IPR006597 Sel1-like repeat VP2811 43dfe7a854aa0cc6db511f8d9b400096 211 SMART SM00671 72 107 0.0025 T 22-04-2016 IPR006597 Sel1-like repeat VP2811 43dfe7a854aa0cc6db511f8d9b400096 211 PANTHER PTHR11102 61 175 7.2E-16 T 22-04-2016 VP2811 43dfe7a854aa0cc6db511f8d9b400096 211 Gene3D G3DSA:1.25.40.10 64 178 4.4E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VP0120 a7b4dff47bd3a4332dc4c0d965b6aaae 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 69 9.9E-12 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 VP2221 a256e6be9b8e9ee594674b31033cf068 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.7E-85 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2221 a256e6be9b8e9ee594674b31033cf068 247 PANTHER PTHR30071 1 224 2.3E-90 T 22-04-2016 VP2221 a256e6be9b8e9ee594674b31033cf068 247 Pfam PF01578 Cytochrome C assembly protein 29 184 1.5E-32 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VP2221 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2221 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2221 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2221 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2221 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP2221 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VP1125 81327504726b875f6caf55661d6147c4 186 Pfam PF16036 Chalcone isomerase-like 47 182 1.6E-7 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 VP1409 5018a62f284d4fcbae1c608aeaa19a57 436 PANTHER PTHR37024 11 207 6.9E-28 T 22-04-2016 VP1409 5018a62f284d4fcbae1c608aeaa19a57 436 Pfam PF06812 ImpA, N-terminal, type VI secretion system 14 124 5.8E-24 T 22-04-2016 IPR010657 ImpA, N-terminal VP1409 5018a62f284d4fcbae1c608aeaa19a57 436 PANTHER PTHR37024:SF1 11 207 6.9E-28 T 22-04-2016 VP2347 481204e63331af68281f8b1c4f02f019 198 PANTHER PTHR30335 2 198 2.9E-147 T 22-04-2016 VP2347 481204e63331af68281f8b1c4f02f019 198 PIRSF PIRSF006102 1 198 4.0E-66 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VP2347 481204e63331af68281f8b1c4f02f019 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.0E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VP2347 481204e63331af68281f8b1c4f02f019 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.927 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VP2347 481204e63331af68281f8b1c4f02f019 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 5.6E-108 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VP2347 481204e63331af68281f8b1c4f02f019 198 PANTHER PTHR30335:SF1 2 198 2.9E-147 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VP1788 ae50f94b7c7d85fa31b5816e17e37232 94 Pfam PF01527 Transposase 10 73 1.1E-11 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VP1788 ae50f94b7c7d85fa31b5816e17e37232 94 SUPERFAMILY SSF46689 7 92 6.81E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VP1788 ae50f94b7c7d85fa31b5816e17e37232 94 Gene3D G3DSA:1.10.10.60 11 88 2.1E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPA0937 6525e3bb87acab017dab74efe8ecd007 46 Gene3D G3DSA:3.20.20.120 2 45 5.3E-4 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VP1049 a07428f54c9a78e470433412dda4d8b0 371 Gene3D G3DSA:1.10.287.950 245 335 8.6E-6 T 22-04-2016 VP1049 a07428f54c9a78e470433412dda4d8b0 371 SUPERFAMILY SSF58104 257 338 4.97E-6 T 22-04-2016 VP2640 fbc37834081bbfc9d98e59d8c779513f 422 Pfam PF10011 Predicted membrane protein (DUF2254) 15 369 3.9E-99 T 22-04-2016 IPR018723 Protein of unknown function DUF2254, membrane VP0360 ae66f8656e4d545834f6a87b56e9f31c 146 Pfam PF11777 Protein of unknown function (DUF3316) 26 139 6.8E-20 T 22-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 VP0360 ae66f8656e4d545834f6a87b56e9f31c 146 PIRSF PIRSF028299 24 146 3.5E-29 T 22-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 VP0406 f33d8a72f030d4bff9547a71dd1e8537 147 SUPERFAMILY SSF89095 1 146 2.46E-45 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 VP0406 f33d8a72f030d4bff9547a71dd1e8537 147 PANTHER PTHR28055:SF1 1 147 5.9E-54 T 22-04-2016 VP0406 f33d8a72f030d4bff9547a71dd1e8537 147 Gene3D G3DSA:1.10.10.410 91 147 2.1E-25 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VP0406 f33d8a72f030d4bff9547a71dd1e8537 147 Gene3D G3DSA:1.10.1510.10 1 90 2.7E-33 T 22-04-2016 VP0406 f33d8a72f030d4bff9547a71dd1e8537 147 Pfam PF09424 Yqey-like protein 5 146 3.8E-58 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial VP0406 f33d8a72f030d4bff9547a71dd1e8537 147 PANTHER PTHR28055 1 147 5.9E-54 T 22-04-2016 VP2298 f49a9e2597be9e9a2ef31c73f8972dff 281 SUPERFAMILY SSF56219 61 277 3.66E-23 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP2298 f49a9e2597be9e9a2ef31c73f8972dff 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 2.6E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP2298 f49a9e2597be9e9a2ef31c73f8972dff 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 58.912 T 22-04-2016 IPR022958 Uncharacterised protein family UPF0294 VP2298 f49a9e2597be9e9a2ef31c73f8972dff 281 Gene3D G3DSA:3.60.10.10 59 215 4.5E-7 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VP0840 301b27837bdf02994988478aa35ec890 256 Pfam PF08907 Domain of unknown function (DUF1853) 29 212 1.6E-39 T 22-04-2016 IPR015003 Protein of unknown function DUF1853 VP1842 93de3a7f3dfdcd4e851e035bfa86e188 117 Pfam PF04221 RelB antitoxin 28 67 1.0E-4 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ VP2344 e6b0afabf43a4b8a0c964113e40466ab 77 Pfam PF04400 Protein of unknown function (DUF539) 22 63 1.7E-21 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM VP2344 e6b0afabf43a4b8a0c964113e40466ab 77 PANTHER PTHR40691 2 76 1.1E-28 T 22-04-2016 VP1002 6c9806864f6ecc5c92211b0788ea2fe2 906 SMART SM01276 453 776 8.9E-43 T 22-04-2016 IPR031161 Peptidase family M60 domain VP1002 6c9806864f6ecc5c92211b0788ea2fe2 906 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 442 854 3.1E-12 T 22-04-2016 IPR031161 Peptidase family M60 domain VP1860 0a8acad6502ecaf6c1ee27257bfd5e53 169 PIRSF PIRSF031551 2 169 3.5E-57 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 VP1860 0a8acad6502ecaf6c1ee27257bfd5e53 169 Pfam PF08020 Protein of unknown function (DUF1706) 4 166 1.9E-52 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 VP1860 0a8acad6502ecaf6c1ee27257bfd5e53 169 PANTHER PTHR40658 1 166 3.8E-65 T 22-04-2016 VP1860 0a8acad6502ecaf6c1ee27257bfd5e53 169 PANTHER PTHR40658:SF3 1 166 3.8E-65 T 22-04-2016 VP0769 bc3a8416e282c0056a40de3d69707249 143 Pfam PF02169 LPP20 lipoprotein 20 118 9.8E-10 T 22-04-2016 IPR024952 Lipoprotein LPP20-like VP0769 bc3a8416e282c0056a40de3d69707249 143 PIRSF PIRSF028687 1 143 5.1E-58 T 22-04-2016 IPR007293 Flagellar protein FlgP VP1058 b1f0f3c68a9406e4a91ec1293e2acc67 147 PANTHER PTHR30558:SF7 4 144 2.3E-53 T 22-04-2016 VP1058 b1f0f3c68a9406e4a91ec1293e2acc67 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 9.1E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VP1058 b1f0f3c68a9406e4a91ec1293e2acc67 147 PANTHER PTHR30558 4 144 2.3E-53 T 22-04-2016 VP2155 48354a19b5b4bce6fb89fd087ac0f634 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 1.3E-75 T 22-04-2016 IPR021372 Protein of unknown function DUF2989 VP0466 1a055b4bdbe5c2c1c93d1f1150c7b7ba 151 Pfam PF05258 Protein of unknown function (DUF721) 11 85 6.0E-13 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 VP2713 6552951ca8dd052a64d5b753cf7d9014 592 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 1.2E-64 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VP2713 6552951ca8dd052a64d5b753cf7d9014 592 Pfam PF04932 O-Antigen ligase 221 369 1.1E-13 T 22-04-2016 IPR007016 O-antigen ligase-related VP2713 6552951ca8dd052a64d5b753cf7d9014 592 Pfam PF15864 Protein glycosylation ligase 174 199 9.3E-11 T 22-04-2016 IPR031726 Protein glycosylation ligase domain VP1412 35a8e86214bef3f05d495161a89e3c0f 166 PANTHER PTHR37625 1 161 2.3E-25 T 22-04-2016 VP1412 35a8e86214bef3f05d495161a89e3c0f 166 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 149 2.9E-34 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN VP1412 35a8e86214bef3f05d495161a89e3c0f 166 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 2 152 7.2E-43 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN VP2266 f6e2957459d3de9a059fe0b8f74d29c1 95 PIRSF PIRSF037266 1 94 4.6E-41 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VP2266 f6e2957459d3de9a059fe0b8f74d29c1 95 Pfam PF09904 Winged helix-turn helix 4 91 4.1E-37 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VP3017 ea4ce27acb3929f7721111eac6bdfc10 151 Pfam PF07681 DoxX 27 108 2.9E-18 T 22-04-2016 IPR032808 DoxX family VP0714 586cfbe13e54e64a18aaca8a45a05512 200 PANTHER PTHR33545 1 198 2.1E-68 T 22-04-2016 VP0714 586cfbe13e54e64a18aaca8a45a05512 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 188 6.6E-36 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT VP0016 467375d48cfcedce3accf4110bd88a43 138 Gene3D G3DSA:3.10.50.30 48 119 6.0E-10 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VP0016 467375d48cfcedce3accf4110bd88a43 138 SUPERFAMILY SSF54534 49 121 2.35E-10 T 22-04-2016 VP0016 467375d48cfcedce3accf4110bd88a43 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 119 3.4E-8 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VP2329 071187246e16da1d093296d27cb8a9b6 528 Pfam PF03806 AbgT putative transporter family 19 526 6.2E-226 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VP2329 071187246e16da1d093296d27cb8a9b6 528 PANTHER PTHR30282:SF0 5 528 6.0E-289 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VP2329 071187246e16da1d093296d27cb8a9b6 528 PANTHER PTHR30282 5 528 6.0E-289 T 22-04-2016 VP2414 9a9d8d07d9662048253659da440dd885 172 Pfam PF07811 TadE-like protein 10 52 8.8E-8 T 22-04-2016 IPR012495 TadE-like VP2696 57a2e7afff15b9c12cc00ed7f159f285 161 SUPERFAMILY SSF54523 10 133 1.49E-9 T 22-04-2016 VP2696 57a2e7afff15b9c12cc00ed7f159f285 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 1.4E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPA1596 dae108f8d6ee9d948f7d942b2d404da2 162 PANTHER PTHR11606 1 102 3.2E-45 T 22-04-2016 VPA1596 dae108f8d6ee9d948f7d942b2d404da2 162 PANTHER PTHR11606:SF1 1 102 3.2E-45 T 22-04-2016 VPA1596 dae108f8d6ee9d948f7d942b2d404da2 162 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 1 161 7.6E-55 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VP0391 e5d31c2f4879a27445d49568102b95b9 49 Pfam PF04927 Seed maturation protein 6 46 3.7E-7 T 22-04-2016 IPR007011 Seed maturation protein VP0613 a368b64ca70ffd0a3d206ddd9cc0a764 293 SUPERFAMILY SSF55186 121 272 2.54E-14 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VP0895 1e9afbe002c9f4c5ca79e786f786e9f2 86 Pfam PF00550 Phosphopantetheine attachment site 8 80 2.5E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP0895 1e9afbe002c9f4c5ca79e786f786e9f2 86 SUPERFAMILY SSF47336 5 85 9.29E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP0895 1e9afbe002c9f4c5ca79e786f786e9f2 86 Gene3D G3DSA:1.10.1200.10 2 84 2.9E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VP1284 33359569270181211a07c7876570bfa8 269 SUPERFAMILY SSF47413 6 71 1.13E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1284 33359569270181211a07c7876570bfa8 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 7.0E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP1284 33359569270181211a07c7876570bfa8 269 Gene3D G3DSA:1.10.260.40 6 68 9.3E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VP1284 33359569270181211a07c7876570bfa8 269 SMART SM00530 12 66 1.5E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VP0382 f64fe4b4c9ad1de74780f94935992dbb 263 Pfam PF00149 Calcineurin-like phosphoesterase 1 228 1.8E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VP0382 f64fe4b4c9ad1de74780f94935992dbb 263 Gene3D G3DSA:3.60.21.10 142 241 3.0E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0382 f64fe4b4c9ad1de74780f94935992dbb 263 Gene3D G3DSA:3.60.21.10 2 75 3.0E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0382 f64fe4b4c9ad1de74780f94935992dbb 263 SUPERFAMILY SSF56300 1 72 4.1E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP0382 f64fe4b4c9ad1de74780f94935992dbb 263 SUPERFAMILY SSF56300 101 247 4.1E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VP2339 43ae29fb40c640727fe1616ae5ccd96a 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 3.1E-73 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 VP2411 1d4c8459961ed32ddd5fddb7c8642fc8 322 Pfam PF00482 Type II secretion system (T2SS), protein F 156 279 7.6E-18 T 22-04-2016 IPR018076 Type II secretion system F domain VP2411 1d4c8459961ed32ddd5fddb7c8642fc8 322 PANTHER PTHR35007:SF1 143 322 3.2E-45 T 22-04-2016 VP2411 1d4c8459961ed32ddd5fddb7c8642fc8 322 PANTHER PTHR35007 143 322 3.2E-45 T 22-04-2016 VP2961 491c42c8ce65c657fed9e36f5daf27c0 206 Pfam PF07947 YhhN-like protein 26 204 3.2E-32 T 22-04-2016 IPR012506 YhhN-like GO:0016021 VP0974 f93bae286b70aba4fe39b33d3500173d 269 Pfam PF10972 Peptidoglycan-binding protein, CsiV 20 268 1.8E-66 T 22-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV VP0087 d56131a81547b826b07f1cf35d456b87 143 Pfam PF09537 Domain of unknown function (DUF2383) 5 111 1.3E-23 T 22-04-2016 IPR019052 Domain of unknown function DUF2383 VP2976 4584641a01918c10e04bf32d449b7919 156 Gene3D G3DSA:3.10.590.10 1 147 4.5E-34 T 22-04-2016 IPR002740 EVE domain VP2976 4584641a01918c10e04bf32d449b7919 156 PANTHER PTHR14087 1 147 1.8E-80 T 22-04-2016 VP2976 4584641a01918c10e04bf32d449b7919 156 SUPERFAMILY SSF88697 1 149 3.13E-63 T 22-04-2016 IPR015947 PUA-like domain VP2976 4584641a01918c10e04bf32d449b7919 156 Pfam PF01878 EVE domain 2 147 5.4E-58 T 22-04-2016 IPR002740 EVE domain VP0757 84c83ca3158b2b8c28daccf08bf42f71 149 Pfam PF04214 Protein of unknown function, DUF 48 118 3.6E-30 T 22-04-2016 IPR007332 Protein of unknown function DUF411 VP1323 33666419eef642f2fd63d1444f462efb 171 Pfam PF01863 Protein of unknown function DUF45 94 150 3.0E-10 T 22-04-2016 IPR002725 Protein of unknown function DUF45 VP1323 33666419eef642f2fd63d1444f462efb 171 PANTHER PTHR30399:SF4 1 163 4.4E-90 T 22-04-2016 VP1323 33666419eef642f2fd63d1444f462efb 171 PANTHER PTHR30399 1 163 4.4E-90 T 22-04-2016 VP2211 c33bed3c5246bd9d6bdbce8ede79b182 242 Pfam PF11859 Protein of unknown function (DUF3379) 1 238 1.9E-87 T 22-04-2016 IPR021806 Protein of unknown function DUF3379 VP1715 fe7fd7b436717b324e958d0abc4977c5 388 PANTHER PTHR30294:SF19 7 387 8.2E-122 T 22-04-2016 VP1715 fe7fd7b436717b324e958d0abc4977c5 388 Pfam PF12698 ABC-2 family transporter protein 15 359 4.7E-39 T 22-04-2016 VP1715 fe7fd7b436717b324e958d0abc4977c5 388 PANTHER PTHR30294 7 387 8.2E-122 T 22-04-2016 VP1911 82fc924503c3da6db8c46eea05e55348 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 2.1E-69 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VP1911 82fc924503c3da6db8c46eea05e55348 362 PANTHER PTHR33376 7 347 8.2E-151 T 22-04-2016 VP1911 82fc924503c3da6db8c46eea05e55348 362 PANTHER PTHR33376:SF5 7 347 8.2E-151 T 22-04-2016 VP1911 82fc924503c3da6db8c46eea05e55348 362 PIRSF PIRSF039026 4 362 5.2E-142 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VP0728 325765f1c386691d0dd8421fa0a95b2a 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 3.2E-46 T 22-04-2016 IPR009912 Zinc-ribbon containing domain VP2186 ea1d7cdaa4566751e5326041d7d65752 163 PANTHER PTHR36926:SF1 1 163 6.5E-80 T 22-04-2016 VP2186 ea1d7cdaa4566751e5326041d7d65752 163 PANTHER PTHR36926 1 163 6.5E-80 T 22-04-2016 VP2186 ea1d7cdaa4566751e5326041d7d65752 163 Pfam PF02674 Colicin V production protein 4 142 7.2E-37 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VP2417 02ff825817d6e6faca5b2826f685d3c8 431 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 27 69 3.6E-9 T 22-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VP0143 670a62ec20528578fb74adb9cca50e8d 253 Pfam PF01203 Type II secretion system (T2SS), protein N 36 247 1.1E-57 T 22-04-2016 IPR022792 Type II secretion system, protein N VP2422 4517aafddbbcf1a10149c47ec45ac22e 162 Pfam PF01478 Type IV leader peptidase family 5 107 7.7E-17 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VP1081 9a5e634f99f7b9eafbf2db43d53e19d5 263 SUPERFAMILY SSF88659 165 258 1.08E-8 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VP1081 9a5e634f99f7b9eafbf2db43d53e19d5 263 Gene3D G3DSA:1.10.10.10 197 259 3.0E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VP0966 293250ff04ab311c8867d4d88b82195b 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 9.4E-29 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 VP0564 207259036a2211685e33cb0224b54706 279 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 276 3.1E-95 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VP0564 207259036a2211685e33cb0224b54706 279 Gene3D G3DSA:3.30.1380.10 21 277 1.5E-100 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VP0564 207259036a2211685e33cb0224b54706 279 SUPERFAMILY SSF55166 21 276 3.06E-97 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VP0564 207259036a2211685e33cb0224b54706 279 PIRSF PIRSF018455 1 279 4.2E-117 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VP2390 497f06bd388ba420993289a9a28ede2a 394 Pfam PF05940 NnrS protein 16 388 8.5E-109 T 22-04-2016 IPR010266 NnrS VP1078 82c0a61589571dd1981b2d1b5d277d0e 249 Pfam PF01936 NYN domain 17 143 4.8E-18 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type VP1078 82c0a61589571dd1981b2d1b5d277d0e 249 Gene3D G3DSA:3.40.50.1010 10 161 2.4E-16 T 22-04-2016 IPR029060 PIN domain-like VP1421 c7c821f989580eb7563bbe39c57309f2 97 PANTHER PTHR30060:SF1 1 83 5.4E-16 T 22-04-2016 VP1421 c7c821f989580eb7563bbe39c57309f2 97 PANTHER PTHR30060 1 83 5.4E-16 T 22-04-2016 VP2265 45a8548aa60fcdafaa2948f4a0d1af33 110 Pfam PF13698 Domain of unknown function (DUF4156) 23 108 8.4E-24 T 22-04-2016 IPR025294 Protein of unknown function DUF4156 VP2335 b8e084133566f96a096f03bb6059df30 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 6.0E-27 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VP2335 b8e084133566f96a096f03bb6059df30 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.93 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VP2335 b8e084133566f96a096f03bb6059df30 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.5E-36 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VP0375 59d8cb4a2576e39dbd8204e38f366446 349 Pfam PF14321 Domain of unknown function (DUF4382) 32 200 9.4E-21 T 22-04-2016 IPR025491 Domain of unknown function DUF4382 VP1495 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 3.7E-36 T 22-04-2016 IPR021343 Protein of unknown function DUF2960 VP1518 00a4d04cf8e9ed6320754b7b9328bf39 123 SUPERFAMILY SSF160631 5 122 6.67E-7 T 22-04-2016 VP0670 6180f53bffc1aeac42b4b47a71b0fc56 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 175 8.4E-42 T 22-04-2016 IPR021768 Protein of unknown function DUF3332 VP2354 d5db7c624566661e456c210d38869080 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.4E-51 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG VP1153 e525ba31cb2ade83d16c324412623c26 275 SUPERFAMILY SSF51735 8 268 1.31E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1153 e525ba31cb2ade83d16c324412623c26 275 Gene3D G3DSA:3.40.50.720 4 240 1.2E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain VP1153 e525ba31cb2ade83d16c324412623c26 275 Pfam PF13460 NAD(P)H-binding 9 188 8.0E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain VP2272 21474e441f128a8f744ad0da22f8d1bd 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 1.7E-105 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein VP2272 21474e441f128a8f744ad0da22f8d1bd 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 34.504 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC VP2272 21474e441f128a8f744ad0da22f8d1bd 339 PIRSF PIRSF026343 4 339 4.3E-122 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC VP1465 85938593a71e4839b6f6f012f9635c11 495 Pfam PF01943 Polysaccharide biosynthesis protein 26 287 1.1E-11 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VP1552 c68fb755ceab56b85d5739b337cab12c 119 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 3.3E-74 T 22-04-2016 IPR009712 Vibrio phage Vf33, Vpf117 VP1577 0a8c23bbe439497e3f1494c9b5073085 252 Gene3D G3DSA:3.40.50.300 17 202 1.9E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1577 0a8c23bbe439497e3f1494c9b5073085 252 SUPERFAMILY SSF52540 18 204 6.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1080 844620f4001d00c173674a2dc61a7949 472 SUPERFAMILY SSF52540 58 219 2.98E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP1080 844620f4001d00c173674a2dc61a7949 472 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 80 453 8.7E-70 T 22-04-2016 IPR018647 Domain of unknown function DUF2075 VP1080 844620f4001d00c173674a2dc61a7949 472 Gene3D G3DSA:3.40.50.300 81 233 1.4E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VP2271 442a8103dddf0be7f50488cbd633e355 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 1.4E-21 T 22-04-2016 IPR021550 Protein of unknown function DUF2897 VP2408 bd9c9e89d1eb356a308836cba3364d0a 370 Pfam PF14378 PAP2 superfamily 146 354 2.2E-42 T 22-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 VP1389 1557150b8d1d336266ea00d7c3f72501 375 Gene3D G3DSA:2.120.10.30 112 293 5.0E-7 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VP1389 1557150b8d1d336266ea00d7c3f72501 375 SUPERFAMILY SSF69304 54 292 7.59E-11 T 22-04-2016 VP2324 509de5f0b281c5549ab97067ce719553 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 9.3E-134 T 22-04-2016 IPR021936 Protein of unknown function DUF3549 VP1810 0fc5f77ec8696cef53a7e96e79f228e4 92 Pfam PF11665 Protein of unknown function (DUF3265) 65 92 1.0E-13 T 22-04-2016 IPR021681 Protein of unknown function DUF3265 VP2291 74430f11c0e313c1b76a1f17d1f3fa19 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 2.0E-136 T 22-04-2016 IPR020010 Conserved hypothetical protein CHP03503 VP2395 1c10606d50370d7efd84844799cefc23 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 40 292 8.2E-12 T 22-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 VP2395 1c10606d50370d7efd84844799cefc23 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 163 172 - T 22-04-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 VP2395 1c10606d50370d7efd84844799cefc23 356 SUPERFAMILY SSF51445 7 313 9.67E-52 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VP2395 1c10606d50370d7efd84844799cefc23 356 Gene3D G3DSA:3.20.20.80 15 332 5.6E-46 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VP1955 f040bba48b95e13e9b113cf249e2841e 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 3.0E-8 T 22-04-2016 IPR012639 Tryptophan operon leader peptide VP1955 f040bba48b95e13e9b113cf249e2841e 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 3.6E-31 T 22-04-2016 IPR012639 Tryptophan operon leader peptide VP1446 4b17beb5c95bd2f0e88d3461c6b1f684 434 Pfam PF06629 MltA-interacting protein MipA 42 237 1.1E-19 T 22-04-2016 IPR010583 MltA-interacting MipA VP0541 77d04baf20b33300ee25d9445ebeee26 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 6.6E-22 T 22-04-2016 IPR021242 Protein of unknown function DUF2799 VP1398 ea18636119bbc9cdc95129f412de0af5 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 2.3E-70 T 22-04-2016 IPR018683 Domain of unknown function DUF2169 VP2264 723fa78d6309a358188eb6ad799db496 118 Pfam PF11169 Protein of unknown function (DUF2956) 12 115 2.1E-43 T 22-04-2016 IPR021339 Protein of unknown function DUF2956 VP1021 8bdadfe827baae286750706d631a5961 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 8.3E-42 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 VP1478 e3173a7ca21ed9460bfa6c458a254195 347 Pfam PF11279 Protein of unknown function (DUF3080) 37 339 4.8E-94 T 22-04-2016 IPR021431 Protein of unknown function DUF3080 VPA1381 d1cbeb33f3d75ac1ccadb747dca9d966 40 Gene3D G3DSA:3.40.50.150 5 39 4.9E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VP1005 ba8e79430027099d2bf1a5778a204c64 181 Pfam PF07445 Primosomal replication protein priC 4 178 1.2E-50 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC VP3014 102826413a27fe477aaf26e67316e7da 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 1.7E-23 T 22-04-2016 IPR018740 Protein of unknown function DUF2282, integral membrane VP1358 258be6a5e5376fb9deae52101e332286 457 Pfam PF04632 Fusaric acid resistance protein family 12 235 2.7E-37 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 VP1358 258be6a5e5376fb9deae52101e332286 457 PANTHER PTHR30509 12 411 1.2E-25 T 22-04-2016 VP1358 258be6a5e5376fb9deae52101e332286 457 PANTHER PTHR30509:SF1 12 411 1.2E-25 T 22-04-2016 VP1636 1fd63605a8ff3e7cf2b8a0a335288c71 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 3.1E-33 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 VP1084 a18f4114b90deea4b135d2968c078904 246 Pfam PF14452 Multiubiquitin 170 244 7.2E-19 T 22-04-2016 IPR027802 Multi-ubiquitin domain VP1084 a18f4114b90deea4b135d2968c078904 246 Pfam PF14452 Multiubiquitin 31 94 1.4E-18 T 22-04-2016 IPR027802 Multi-ubiquitin domain VP1084 a18f4114b90deea4b135d2968c078904 246 Pfam PF14452 Multiubiquitin 99 163 1.7E-16 T 22-04-2016 IPR027802 Multi-ubiquitin domain VPA0023 553b1abf35bb1dceb9811ea1c4ca02fc 164 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 2 163 1.7E-55 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPA0023 553b1abf35bb1dceb9811ea1c4ca02fc 164 PANTHER PTHR30075 1 164 5.2E-86 T 22-04-2016 VP0813 7b17731b1a322ead51c2e865b9d5288f 116 SUPERFAMILY SSF54913 1 102 1.11E-21 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VP0813 7b17731b1a322ead51c2e865b9d5288f 116 SMART SM00938 6 104 7.6E-6 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VP0813 7b17731b1a322ead51c2e865b9d5288f 116 Gene3D G3DSA:3.30.70.120 3 103 1.7E-10 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VP1866 dc2ceb3761a6f7494283fb02a32991c2 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 4.5E-73 T 22-04-2016 IPR021334 Protein of unknown function DUF2947 VP0885 20fc7801c2a290a52e0736831fa44fcd 203 Pfam PF11659 Protein of unknown function (DUF3261) 16 173 1.6E-41 T 22-04-2016 IPR021675 Protein of unknown function DUF3261 VP1356 68252ea10d75f637ec9e2f72122412a0 393 Pfam PF01103 Surface antigen 107 393 2.0E-10 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VP3047 ef4085749eac8334f5f029d99453803c 214 Pfam PF11355 Protein of unknown function (DUF3157) 22 213 4.3E-76 T 22-04-2016 IPR021501 Protein of unknown function DUF3157 VP2618 b9c733cc32cf84337266bc1e6ea91e01 185 PANTHER PTHR33219:SF5 1 185 1.0E-84 T 22-04-2016 VP2618 b9c733cc32cf84337266bc1e6ea91e01 185 PANTHER PTHR33219 1 185 1.0E-84 T 22-04-2016 VP2618 b9c733cc32cf84337266bc1e6ea91e01 185 Pfam PF02325 YGGT family 109 173 1.3E-18 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 VP2618 b9c733cc32cf84337266bc1e6ea91e01 185 Pfam PF02325 YGGT family 10 77 1.6E-19 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 VP1254 aedfd793a29a4f24baba8fb3506b247a 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 2.6E-96 T 22-04-2016 IPR021246 Protein of unknown function DUF2797 VP1659 f56ecc6fdfad158a9acc06689d1f3c36 607 SUPERFAMILY SSF103388 348 606 1.23E-92 T 22-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 VP1659 f56ecc6fdfad158a9acc06689d1f3c36 607 Pfam PF04792 V antigen (LcrV) protein 393 607 3.6E-32 T 22-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 VP1757 c48af3b77e83b1d8b0223cf4e55b885f 375 SUPERFAMILY SSF56935 39 375 5.86E-26 T 22-04-2016 VP1757 c48af3b77e83b1d8b0223cf4e55b885f 375 Gene3D G3DSA:2.40.160.10 145 369 2.3E-8 T 22-04-2016 IPR023614 Porin domain VP2733 108e5732142ac92bab5004b4b19168c5 391 Pfam PF01103 Surface antigen 109 364 6.3E-6 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VP0128 679007b903d0a81407a028102ad1c599 684 Pfam PF05170 AsmA family 1 569 5.2E-182 T 22-04-2016 IPR007844 AsmA VP1858 6115f2891264dfe5718b066f6137ab29 59 Pfam PF04875 Protein of unknown function, DUF645 1 59 6.4E-40 T 22-04-2016 IPR006959 Protein of unknown function DUF645 VP2257 f5bb5ec244f7b16ca2d67b3f3530c15f 144 Gene3D G3DSA:3.30.160.170 58 140 4.0E-24 T 22-04-2016 IPR005186 FlaG protein VP2257 f5bb5ec244f7b16ca2d67b3f3530c15f 144 PANTHER PTHR37166 18 144 5.3E-21 T 22-04-2016 VP2257 f5bb5ec244f7b16ca2d67b3f3530c15f 144 PANTHER PTHR37166:SF1 18 144 5.3E-21 T 22-04-2016 VP2257 f5bb5ec244f7b16ca2d67b3f3530c15f 144 Pfam PF03646 FlaG protein 43 142 1.7E-24 T 22-04-2016 IPR005186 FlaG protein VP2257 f5bb5ec244f7b16ca2d67b3f3530c15f 144 SUPERFAMILY SSF160214 62 143 3.79E-22 T 22-04-2016 IPR005186 FlaG protein VP1004 bf8ecca6cd0f80976c6fa9b9f5b2f656 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 1.6E-23 T 22-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related VP1691 f965d6c8c9e57f3bcfe739189ad9dc51 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 2.1E-28 T 22-04-2016 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 VP1691 f965d6c8c9e57f3bcfe739189ad9dc51 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 22-04-2016 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 VP2297 114e1e3a5620506ce3cee14352f23f86 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 1.2E-40 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 VP0210 2a61e9b6b65f979d4f959b2c59689120 239 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 175 8.7E-33 T 22-04-2016 IPR002654 Glycosyl transferase, family 25 VP0286 25c0a489ee4681f1d2bee83085444134 199 Pfam PF04225 Opacity-associated protein A LysM-like domain 115 199 4.2E-39 T 22-04-2016 IPR007340 Opacity-associated protein A VP0286 25c0a489ee4681f1d2bee83085444134 199 Gene3D G3DSA:3.10.350.10 116 161 6.0E-4 T 22-04-2016 IPR018392 LysM domain VP0286 25c0a489ee4681f1d2bee83085444134 199 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 4.2E-7 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal VP0228 e8f39f7fa9692fa70773ce55e7798b35 409 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 20 389 2.6E-18 T 22-04-2016 VP1126 b505b9f1f225eb14fb792f768132e652 179 Pfam PF12915 Protein of unknown function (DUF3833) 17 177 8.2E-65 T 22-04-2016 IPR024409 Protein of unknown function DUF3833 VP0215 cc187e331ce8d1a2bdfbbe7c5e315e6f 732 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 717 6.8E-253 T 22-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH VP1164 477ce414f259a501d83cd75b7be1c817 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 402 2.4E-165 T 22-04-2016 IPR021552 Putative, 10TM heavy-metal exporter VP2620 9fb933e29602b573562b4960424eddee 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 1.1E-48 T 22-04-2016 IPR025218 Domain of unknown function DUF4426 VP1319 29f3911923d8bc33d060b92c5dd03704 379 Pfam PF04230 Polysaccharide pyruvyl transferase 16 317 5.3E-27 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase VP1522 20b3acb8237d9be8500f1598d1c10dce 307 Pfam PF15575 Immunity protein 49 75 291 4.2E-45 T 22-04-2016 IPR029074 Immunity protein 49 VP1851 68ec77adecd5474f2537f3807ad5b10b 221 Pfam PF12787 EcsC protein family 21 214 1.0E-16 T 22-04-2016 IPR024787 EcsC protein VP0897 f7cd236d970948bfcc8de476c9b62220 191 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 1 188 9.7E-68 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VP1670 eb74d2d81b2152fc80908da35a5b17eb 446 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 307 444 1.7E-51 T 22-04-2016 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 VP1829 21f28352956f2bed723710a53290e1c8 94 Pfam PF04221 RelB antitoxin 5 70 2.9E-5 T 22-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ VP1698 fca415b031b00f02290e6ba742d804be 332 Pfam PF16806 Antiactivator protein ExsD 58 315 2.3E-97 T 22-04-2016 IPR031835 Antiactivator protein ExsD VP0347 147d8d16f166d74de021d930d3fa8f8e 265 Pfam PF08239 Bacterial SH3 domain 132 184 1.1E-12 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type VP1252 995d525c43d475e6a2013d68e217b00c 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 1.2E-54 T 22-04-2016 IPR018724 2OG-Fe dioxygenase VP0502 37303fa4eb4cc519f46dfa6353fdcc3a 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 9.0E-26 T 22-04-2016 IPR021932 Protein of unknown function DUF3545 VP1657 e1ee8690ec6f6c276765008782b9af8d 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 5.1E-48 T 22-04-2016 IPR006972 Secretion system effector C, SseC-like GO:0009405 VP0667 036203cbb998ecf414f7d4b315b44aa6 100 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 5.2E-35 T 22-04-2016 IPR022069 Protein of unknown function DUF3622