locus-tag class description VPUCM_RS00005 PF00258 Flavodoxin VPUCM_RS00010 PF12631 MnmE helical domain VPUCM_RS00010 PF10396 GTP-binding protein TrmE N-terminus VPUCM_RS00010 PF01926 50S ribosome-binding GTPase VPUCM_RS00015 PF02096 60Kd inner membrane protein VPUCM_RS00015 PF14849 YidC periplasmic domain VPUCM_RS00020 PF00825 Ribonuclease P VPUCM_RS00025 PF00468 Ribosomal protein L34 VPUCM_RS00030 PF00005 ABC transporter VPUCM_RS00035 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS00040 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_RS00045 PF11638 DnaA N-terminal domain VPUCM_RS00045 PF08299 Bacterial dnaA protein helix-turn-helix VPUCM_RS00045 PF00308 Bacterial dnaA protein VPUCM_RS00050 PF00712 DNA polymerase III beta subunit, N-terminal domain VPUCM_RS00050 PF02767 DNA polymerase III beta subunit, central domain VPUCM_RS00050 PF02768 DNA polymerase III beta subunit, C-terminal domain VPUCM_RS00055 PF02463 RecF/RecN/SMC N terminal domain VPUCM_RS00060 PF00986 DNA gyrase B subunit, carboxyl terminus VPUCM_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS00060 PF18053 DNA gyrase B subunit insert domain VPUCM_RS00060 PF01751 Toprim domain VPUCM_RS00060 PF00204 DNA gyrase B VPUCM_RS00075 PF00011 Hsp20/alpha crystallin family VPUCM_RS00080 PF00155 Aminotransferase class I and II VPUCM_RS00085 PF00128 Alpha amylase, catalytic domain VPUCM_RS00090 PF02092 Glycyl-tRNA synthetase beta subunit VPUCM_RS00090 PF05746 DALR anticodon binding domain VPUCM_RS00095 PF02091 Glycyl-tRNA synthetase alpha subunit VPUCM_RS00100 PF01169 Uncharacterized protein family UPF0016 VPUCM_RS00110 PF01206 Sulfurtransferase TusA VPUCM_RS00120 PF03466 LysR substrate binding domain VPUCM_RS00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS00125 PF00107 Zinc-binding dehydrogenase VPUCM_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_RS00130 PF00108 Thiolase, N-terminal domain VPUCM_RS00130 PF02803 Thiolase, C-terminal domain VPUCM_RS00135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VPUCM_RS00135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VPUCM_RS00135 PF00378 Enoyl-CoA hydratase/isomerase VPUCM_RS00140 PF09186 Domain of unknown function (DUF1949) VPUCM_RS00140 PF01205 Uncharacterized protein family UPF0029 VPUCM_RS00145 PF02386 Cation transport protein VPUCM_RS00150 PF12724 Flavodoxin domain VPUCM_RS00185 PF03466 LysR substrate binding domain VPUCM_RS00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS00190 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VPUCM_RS00190 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VPUCM_RS00195 PF04380 Membrane fusogenic activity VPUCM_RS00200 PF00873 AcrB/AcrD/AcrF family VPUCM_RS00205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VPUCM_RS00210 PF16295 Tetracyclin repressor-like, C-terminal domain VPUCM_RS00210 PF00440 Bacterial regulatory proteins, tetR family VPUCM_RS00215 PF00580 UvrD/REP helicase N-terminal domain VPUCM_RS00215 PF13361 UvrD-like helicase C-terminal domain VPUCM_RS00220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VPUCM_RS00250 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_RS00260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS00260 PF00005 ABC transporter VPUCM_RS00265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_RS00270 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS00275 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS00275 PF12911 N-terminal TM domain of oligopeptide transport permease C VPUCM_RS00305 PF00069 Protein kinase domain VPUCM_RS00310 PF00356 Bacterial regulatory proteins, lacI family VPUCM_RS00310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VPUCM_RS00315 PF03466 LysR substrate binding domain VPUCM_RS00315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS00320 PF00893 Small Multidrug Resistance protein VPUCM_RS00325 PF00893 Small Multidrug Resistance protein VPUCM_RS00330 PF00920 Dehydratase family VPUCM_RS00335 PF01202 Shikimate kinase VPUCM_RS00340 PF02447 GntP family permease VPUCM_RS00345 PF01081 KDPG and KHG aldolase VPUCM_RS00350 PF01048 Phosphorylase superfamily VPUCM_RS00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS00355 PF03466 LysR substrate binding domain VPUCM_RS00360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VPUCM_RS00360 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS00365 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VPUCM_RS00370 PF01432 Peptidase family M3 VPUCM_RS00375 PF01037 Lrp/AsnC ligand binding domain VPUCM_RS00385 PF04445 Putative SAM-dependent methyltransferase VPUCM_RS00395 PF00892 EamA-like transporter family VPUCM_RS00400 PF00582 Universal stress protein family VPUCM_RS00405 PF00210 Ferritin-like domain VPUCM_RS00410 PF10625 Universal stress protein B (UspB) VPUCM_RS00420 PF01590 GAF domain VPUCM_RS00420 PF00158 Sigma-54 interaction domain VPUCM_RS00420 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS00425 PF04972 BON domain VPUCM_RS00445 PF00781 Diacylglycerol kinase catalytic domain VPUCM_RS00475 PF01594 AI-2E family transporter VPUCM_RS00480 PF03707 Bacterial signalling protein N terminal repeat VPUCM_RS00480 PF00563 EAL domain VPUCM_RS00480 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS00490 PF02646 RmuC family VPUCM_RS00495 PF01209 ubiE/COQ5 methyltransferase family VPUCM_RS00500 PF02036 SCP-2 sterol transfer family VPUCM_RS00505 PF03109 ABC1 family VPUCM_RS00510 PF02416 mttA/Hcf106 family VPUCM_RS00515 PF02416 mttA/Hcf106 family VPUCM_RS00520 PF00902 Sec-independent protein translocase protein (TatC) VPUCM_RS00525 PF01026 TatD related DNase VPUCM_RS00530 PF00490 Delta-aminolevulinic acid dehydratase VPUCM_RS00540 PF01612 3'-5' exonuclease VPUCM_RS00540 PF00476 DNA polymerase family A VPUCM_RS00540 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VPUCM_RS00540 PF01367 5'-3' exonuclease, C-terminal SAM fold VPUCM_RS00545 PF01926 50S ribosome-binding GTPase VPUCM_RS00550 PF00034 Cytochrome c VPUCM_RS00565 PF04220 Der GTPase activator (YihI) VPUCM_RS00570 PF10675 Protein of unknown function (DUF2489) VPUCM_RS00575 PF06969 HemN C-terminal domain VPUCM_RS00575 PF04055 Radical SAM superfamily VPUCM_RS00580 PF00962 Adenosine/AMP deaminase VPUCM_RS00585 PF00563 EAL domain VPUCM_RS00585 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS00585 PF03707 Bacterial signalling protein N terminal repeat VPUCM_RS00590 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS00590 PF00158 Sigma-54 interaction domain VPUCM_RS00590 PF00072 Response regulator receiver domain VPUCM_RS00595 PF00989 PAS fold VPUCM_RS00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS00595 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS00605 PF03951 Glutamine synthetase, beta-Grasp domain VPUCM_RS00605 PF00120 Glutamine synthetase, catalytic domain VPUCM_RS00610 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS00610 PF00679 Elongation factor G C-terminus VPUCM_RS00610 PF03144 Elongation factor Tu domain 2 VPUCM_RS00625 PF03631 Virulence factor BrkB VPUCM_RS00630 PF02580 D-Tyr-tRNA(Tyr) deacylase VPUCM_RS00635 PF09500 Putative thioesterase (yiiD_Cterm) VPUCM_RS00635 PF00583 Acetyltransferase (GNAT) family VPUCM_RS00645 PF01293 Phosphoenolpyruvate carboxykinase VPUCM_RS00650 PF01430 Hsp33 protein VPUCM_RS00655 PF01479 S4 domain VPUCM_RS00660 PF11356 Type II secretion system protein C VPUCM_RS00665 PF00263 Bacterial type II and III secretion system protein VPUCM_RS00665 PF03958 Bacterial type II/III secretion system short domain VPUCM_RS00670 PF00437 Type II/IV secretion system protein VPUCM_RS00675 PF00482 Type II secretion system (T2SS), protein F VPUCM_RS00680 PF07963 Prokaryotic N-terminal methylation motif VPUCM_RS00680 PF08334 Type II secretion system (T2SS), protein G VPUCM_RS00685 PF12019 Type II transport protein GspH VPUCM_RS00690 PF07963 Prokaryotic N-terminal methylation motif VPUCM_RS00690 PF02501 Type II secretion system (T2SS), protein I VPUCM_RS00695 PF07963 Prokaryotic N-terminal methylation motif VPUCM_RS00695 PF11612 Type II secretion system (T2SS), protein J VPUCM_RS00700 PF03934 Type II secretion system (T2SS), protein K VPUCM_RS00705 PF05134 Type II secretion system (T2SS), protein L VPUCM_RS00705 PF12693 GspL periplasmic domain VPUCM_RS00710 PF04612 Type II secretion system (T2SS), protein M VPUCM_RS00715 PF01203 Type II secretion system (T2SS), protein N VPUCM_RS00720 PF00459 Inositol monophosphatase family VPUCM_RS00725 PF00293 NUDIX domain VPUCM_RS00730 PF01521 Iron-sulphur cluster biosynthesis VPUCM_RS00730 PF01106 NifU-like domain VPUCM_RS00735 PF00156 Phosphoribosyl transferase domain VPUCM_RS00740 PF00561 alpha/beta hydrolase fold VPUCM_RS00750 PF16921 Tex protein YqgF-like domain VPUCM_RS00750 PF00575 S1 RNA binding domain VPUCM_RS00750 PF09371 Tex-like protein N-terminal domain VPUCM_RS00750 PF17674 HHH domain VPUCM_RS00760 PF03449 Transcription elongation factor, N-terminal VPUCM_RS00760 PF01272 Transcription elongation factor, GreA/GreB, C-term VPUCM_RS00770 PF00072 Response regulator receiver domain VPUCM_RS00770 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS00775 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS00775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS00775 PF00672 HAMP domain VPUCM_RS00780 PF00860 Permease family VPUCM_RS00790 PF00271 Helicase conserved C-terminal domain VPUCM_RS00790 PF00270 DEAD/DEAH box helicase VPUCM_RS00790 PF17191 RecG wedge domain VPUCM_RS00795 PF00588 SpoU rRNA Methylase family VPUCM_RS00795 PF12105 SpoU, rRNA methylase, C-terminal VPUCM_RS00800 PF02824 TGS domain VPUCM_RS00800 PF04607 Region found in RelA / SpoT proteins VPUCM_RS00800 PF13291 ACT domain VPUCM_RS00805 PF01192 RNA polymerase Rpb6 VPUCM_RS00810 PF00625 Guanylate kinase VPUCM_RS00825 PF02472 Biopolymer transport protein ExbD/TolR VPUCM_RS00830 PF01618 MotA/TolQ/ExbB proton channel family VPUCM_RS00845 PF07715 TonB-dependent Receptor Plug Domain VPUCM_RS00845 PF00593 TonB dependent receptor VPUCM_RS00850 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS00855 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS00855 PF12911 N-terminal TM domain of oligopeptide transport permease C VPUCM_RS00860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_RS00865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS00865 PF00005 ABC transporter VPUCM_RS00870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS00870 PF00005 ABC transporter VPUCM_RS00900 PF00669 Bacterial flagellin N-terminal helical region VPUCM_RS00900 PF00700 Bacterial flagellin C-terminal helical region VPUCM_RS00900 PF07196 Flagellin hook IN motif VPUCM_RS00910 PF03755 YicC-like family, N-terminal region VPUCM_RS00910 PF08340 Domain of unknown function (DUF1732) VPUCM_RS00915 PF01138 3' exoribonuclease family, domain 1 VPUCM_RS00915 PF03725 3' exoribonuclease family, domain 2 VPUCM_RS00920 PF00156 Phosphoribosyl transferase domain VPUCM_RS00925 PF03279 Bacterial lipid A biosynthesis acyltransferase VPUCM_RS00930 PF00440 Bacterial regulatory proteins, tetR family VPUCM_RS00935 PF04127 DNA / pantothenate metabolism flavoprotein VPUCM_RS00935 PF02441 Flavoprotein VPUCM_RS00940 PF00672 HAMP domain VPUCM_RS00940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS00940 PF17200 Single Cache domain 2 VPUCM_RS00945 PF04002 RadC-like JAB domain VPUCM_RS00950 PF00830 Ribosomal L28 family VPUCM_RS00955 PF00471 Ribosomal protein L33 VPUCM_RS00965 PF06827 Zinc finger found in FPG and IleRS VPUCM_RS00965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VPUCM_RS00965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VPUCM_RS00975 PF01467 Cytidylyltransferase-like VPUCM_RS00980 PF00534 Glycosyl transferases group 1 VPUCM_RS00985 PF00535 Glycosyl transferase family 2 VPUCM_RS00990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VPUCM_RS00995 PF01219 Prokaryotic diacylglycerol kinase VPUCM_RS01005 PF00884 Sulfatase VPUCM_RS01005 PF11893 Domain of unknown function (DUF3413) VPUCM_RS01020 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_RS01025 PF02719 Polysaccharide biosynthesis protein VPUCM_RS01030 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VPUCM_RS01035 PF02350 UDP-N-acetylglucosamine 2-epimerase VPUCM_RS01040 PF08666 SAF domain VPUCM_RS01040 PF03102 NeuB family VPUCM_RS01050 PF00483 Nucleotidyl transferase VPUCM_RS01055 PF02348 Cytidylyltransferase VPUCM_RS01065 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VPUCM_RS01070 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VPUCM_RS01075 PF03279 Bacterial lipid A biosynthesis acyltransferase VPUCM_RS01080 PF01370 NAD dependent epimerase/dehydratase family VPUCM_RS01085 PF06082 Exopolysaccharide biosynthesis protein YbjH VPUCM_RS01095 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VPUCM_RS01110 PF00953 Glycosyl transferase family 4 VPUCM_RS01115 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS01130 PF01507 Phosphoadenosine phosphosulfate reductase family VPUCM_RS01140 PF07963 Prokaryotic N-terminal methylation motif VPUCM_RS01140 PF08334 Type II secretion system (T2SS), protein G VPUCM_RS01145 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VPUCM_RS01145 PF00437 Type II/IV secretion system protein VPUCM_RS01150 PF00482 Type II secretion system (T2SS), protein F VPUCM_RS01155 PF07963 Prokaryotic N-terminal methylation motif VPUCM_RS01155 PF08334 Type II secretion system (T2SS), protein G VPUCM_RS01170 PF03934 Type II secretion system (T2SS), protein K VPUCM_RS01190 PF03958 Bacterial type II/III secretion system short domain VPUCM_RS01190 PF00263 Bacterial type II and III secretion system protein VPUCM_RS01200 PF00953 Glycosyl transferase family 4 VPUCM_RS01210 PF02563 Polysaccharide biosynthesis/export protein VPUCM_RS01210 PF10531 SLBB domain VPUCM_RS01215 PF01061 ABC-2 type transporter VPUCM_RS01220 PF00005 ABC transporter VPUCM_RS01230 PF00483 Nucleotidyl transferase VPUCM_RS01235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VPUCM_RS01240 PF04321 RmlD substrate binding domain VPUCM_RS01245 PF16363 GDP-mannose 4,6 dehydratase VPUCM_RS01270 PF00793 DAHP synthetase I family VPUCM_RS01275 PF02348 Cytidylyltransferase VPUCM_RS01280 PF00571 CBS domain VPUCM_RS01280 PF01380 SIS domain VPUCM_RS01285 PF00535 Glycosyl transferase family 2 VPUCM_RS01315 PF02080 TrkA-C domain VPUCM_RS01315 PF03600 Citrate transporter VPUCM_RS01325 PF00535 Glycosyl transferase family 2 VPUCM_RS01340 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VPUCM_RS01340 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VPUCM_RS01340 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VPUCM_RS01345 PF00483 Nucleotidyl transferase VPUCM_RS01350 PF00121 Triosephosphate isomerase VPUCM_RS01370 PF00455 DeoR C terminal sensor domain VPUCM_RS01370 PF08220 DeoR-like helix-turn-helix domain VPUCM_RS01375 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VPUCM_RS01380 PF06005 Cell division protein ZapB VPUCM_RS01385 PF03737 Aldolase/RraA VPUCM_RS01390 PF01040 UbiA prenyltransferase family VPUCM_RS01395 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS01395 PF07724 AAA domain (Cdc48 subfamily) VPUCM_RS01400 PF00227 Proteasome subunit VPUCM_RS01410 PF00356 Bacterial regulatory proteins, lacI family VPUCM_RS01415 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VPUCM_RS01415 PF18074 Primosomal protein N C-terminal domain VPUCM_RS01415 PF17764 3′ DNA-binding domain (3′BD) VPUCM_RS01415 PF00270 DEAD/DEAH box helicase VPUCM_RS01415 PF00271 Helicase conserved C-terminal domain VPUCM_RS01420 PF01197 Ribosomal protein L31 VPUCM_RS01425 PF00338 Ribosomal protein S10p/S20e VPUCM_RS01430 PF00297 Ribosomal protein L3 VPUCM_RS01435 PF00573 Ribosomal protein L4/L1 family VPUCM_RS01440 PF00276 Ribosomal protein L23 VPUCM_RS01445 PF00181 Ribosomal Proteins L2, RNA binding domain VPUCM_RS01445 PF03947 Ribosomal Proteins L2, C-terminal domain VPUCM_RS01450 PF00203 Ribosomal protein S19 VPUCM_RS01455 PF00237 Ribosomal protein L22p/L17e VPUCM_RS01460 PF00189 Ribosomal protein S3, C-terminal domain VPUCM_RS01460 PF07650 KH domain VPUCM_RS01465 PF00252 Ribosomal protein L16p/L10e VPUCM_RS01470 PF00831 Ribosomal L29 protein VPUCM_RS01475 PF00366 Ribosomal protein S17 VPUCM_RS01480 PF00238 Ribosomal protein L14p/L23e VPUCM_RS01485 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VPUCM_RS01485 PF00467 KOW motif VPUCM_RS01490 PF00281 Ribosomal protein L5 VPUCM_RS01490 PF00673 ribosomal L5P family C-terminus VPUCM_RS01495 PF00253 Ribosomal protein S14p/S29e VPUCM_RS01500 PF00410 Ribosomal protein S8 VPUCM_RS01505 PF00347 Ribosomal protein L6 VPUCM_RS01510 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VPUCM_RS01515 PF00333 Ribosomal protein S5, N-terminal domain VPUCM_RS01515 PF03719 Ribosomal protein S5, C-terminal domain VPUCM_RS01520 PF00327 Ribosomal protein L30p/L7e VPUCM_RS01525 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VPUCM_RS01530 PF00344 SecY translocase VPUCM_RS01535 PF00444 Ribosomal protein L36 VPUCM_RS01540 PF00416 Ribosomal protein S13/S18 VPUCM_RS01545 PF00411 Ribosomal protein S11 VPUCM_RS01550 PF00163 Ribosomal protein S4/S9 N-terminal domain VPUCM_RS01550 PF01479 S4 domain VPUCM_RS01555 PF01000 RNA polymerase Rpb3/RpoA insert domain VPUCM_RS01555 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VPUCM_RS01555 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VPUCM_RS01560 PF01196 Ribosomal protein L17 VPUCM_RS01570 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VPUCM_RS01570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_RS01580 PF13673 Acetyltransferase (GNAT) domain VPUCM_RS01585 PF00271 Helicase conserved C-terminal domain VPUCM_RS01585 PF00270 DEAD/DEAH box helicase VPUCM_RS01585 PF03880 DbpA RNA binding domain VPUCM_RS01595 PF02872 5'-nucleotidase, C-terminal domain VPUCM_RS01595 PF00149 Calcineurin-like phosphoesterase VPUCM_RS01600 PF10414 Sirohaem synthase dimerisation region VPUCM_RS01600 PF14824 Sirohaem biosynthesis protein central VPUCM_RS01600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VPUCM_RS01605 PF01507 Phosphoadenosine phosphosulfate reductase family VPUCM_RS01610 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS01615 PF02080 TrkA-C domain VPUCM_RS01615 PF03600 Citrate transporter VPUCM_RS01640 PF00005 ABC transporter VPUCM_RS01655 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VPUCM_RS01660 PF06526 Protein of unknown function (DUF1107) VPUCM_RS01665 PF01625 Peptide methionine sulfoxide reductase VPUCM_RS01670 PF17243 POTRA domain TamA domain 1 VPUCM_RS01670 PF01103 Surface antigen VPUCM_RS01675 PF04357 TamB, inner membrane protein subunit of TAM complex VPUCM_RS01680 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VPUCM_RS01690 PF00719 Inorganic pyrophosphatase VPUCM_RS01695 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VPUCM_RS01700 PF08245 Mur ligase middle domain VPUCM_RS01700 PF02875 Mur ligase family, glutamate ligase domain VPUCM_RS01700 PF01225 Mur ligase family, catalytic domain VPUCM_RS01705 PF02441 Flavoprotein VPUCM_RS01715 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS01720 PF00005 ABC transporter VPUCM_RS01735 PF16868 NMT1-like family VPUCM_RS01740 PF02863 Arginine repressor, C-terminal domain VPUCM_RS01740 PF01316 Arginine repressor, DNA binding domain VPUCM_RS01745 PF00056 lactate/malate dehydrogenase, NAD binding domain VPUCM_RS01745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VPUCM_RS01755 PF00348 Polyprenyl synthetase VPUCM_RS01760 PF00829 Ribosomal prokaryotic L21 protein VPUCM_RS01765 PF01016 Ribosomal L27 protein VPUCM_RS01770 PF01018 GTP1/OBG VPUCM_RS01770 PF01926 50S ribosome-binding GTPase VPUCM_RS01775 PF06738 Putative threonine/serine exporter VPUCM_RS01780 PF12821 Threonine/Serine exporter, ThrE VPUCM_RS01785 PF00186 Dihydrofolate reductase VPUCM_RS01790 PF00149 Calcineurin-like phosphoesterase VPUCM_RS01795 PF04379 ApaG domain VPUCM_RS01800 PF00398 Ribosomal RNA adenine dimethylase VPUCM_RS01805 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VPUCM_RS01810 PF09312 SurA N-terminal domain VPUCM_RS01815 PF04453 LPS transport system D VPUCM_RS01815 PF03968 OstA-like protein VPUCM_RS01820 PF00226 DnaJ domain VPUCM_RS01820 PF05099 Tellurite resistance protein TerB VPUCM_RS01830 PF00694 Aconitase C-terminal domain VPUCM_RS01835 PF00330 Aconitase family (aconitate hydratase) VPUCM_RS01840 PF00180 Isocitrate/isopropylmalate dehydrogenase VPUCM_RS01845 PF08502 LeuA allosteric (dimerisation) domain VPUCM_RS01845 PF00682 HMGL-like VPUCM_RS01855 PF01569 PAP2 superfamily VPUCM_RS01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS01865 PF03466 LysR substrate binding domain VPUCM_RS01870 PF00501 AMP-binding enzyme VPUCM_RS01875 PF00205 Thiamine pyrophosphate enzyme, central domain VPUCM_RS01875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VPUCM_RS01875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VPUCM_RS01880 PF10369 Small subunit of acetolactate synthase VPUCM_RS01885 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS01895 PF02887 Pyruvate kinase, alpha/beta domain VPUCM_RS01895 PF00224 Pyruvate kinase, barrel domain VPUCM_RS01900 PF00455 DeoR C terminal sensor domain VPUCM_RS01900 PF08220 DeoR-like helix-turn-helix domain VPUCM_RS01905 PF01380 SIS domain VPUCM_RS01915 PF00072 Response regulator receiver domain VPUCM_RS01915 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS01920 PF00672 HAMP domain VPUCM_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS01920 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS01925 PF00465 Iron-containing alcohol dehydrogenase VPUCM_RS01930 PF02733 Dak1 domain VPUCM_RS01935 PF02734 DAK2 domain VPUCM_RS01940 PF05524 PEP-utilising enzyme, N-terminal VPUCM_RS01940 PF00391 PEP-utilising enzyme, mobile domain VPUCM_RS01940 PF02896 PEP-utilising enzyme, TIM barrel domain VPUCM_RS01945 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS01945 PF00989 PAS fold VPUCM_RS01945 PF00158 Sigma-54 interaction domain VPUCM_RS01950 PF05068 Mannitol repressor VPUCM_RS01955 PF01232 Mannitol dehydrogenase Rossmann domain VPUCM_RS01955 PF08125 Mannitol dehydrogenase C-terminal domain VPUCM_RS01960 PF02378 Phosphotransferase system, EIIC VPUCM_RS01960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_RS01960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_RS01990 PF03180 NLPA lipoprotein VPUCM_RS02000 PF00140 Sigma-70 factor, region 1.2 VPUCM_RS02000 PF04546 Sigma-70, non-essential region VPUCM_RS02000 PF04542 Sigma-70 region 2 VPUCM_RS02000 PF03979 Sigma-70 factor, region 1.1 VPUCM_RS02000 PF04539 Sigma-70 region 3 VPUCM_RS02000 PF04545 Sigma-70, region 4 VPUCM_RS02005 PF08278 DNA primase DnaG DnaB-binding VPUCM_RS02005 PF10410 DnaB-helicase binding domain of primase VPUCM_RS02005 PF01807 CHC2 zinc finger VPUCM_RS02005 PF08275 DNA primase catalytic core, N-terminal domain VPUCM_RS02010 PF09424 Yqey-like protein VPUCM_RS02015 PF01165 Ribosomal protein S21 VPUCM_RS02020 PF00814 Glycoprotease family VPUCM_RS02025 PF12697 Alpha/beta hydrolase family VPUCM_RS02030 PF02660 Glycerol-3-phosphate acyltransferase VPUCM_RS02035 PF02152 Dihydroneopterin aldolase VPUCM_RS02040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VPUCM_RS02045 PF02673 Bacitracin resistance protein BacA VPUCM_RS02050 PF12627 Probable RNA and SrmB- binding site of polymerase A VPUCM_RS02050 PF01966 HD domain VPUCM_RS02050 PF01743 Poly A polymerase head domain VPUCM_RS02055 PF01471 Putative peptidoglycan binding domain VPUCM_RS02055 PF13401 AAA domain VPUCM_RS02065 PF08239 Bacterial SH3 domain VPUCM_RS02070 PF01384 Phosphate transporter family VPUCM_RS02075 PF01865 Protein of unknown function DUF47 VPUCM_RS02080 PF01928 CYTH domain VPUCM_RS02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS02090 PF00672 HAMP domain VPUCM_RS02095 PF08335 GlnD PII-uridylyltransferase VPUCM_RS02095 PF03710 Glutamate-ammonia ligase adenylyltransferase VPUCM_RS02100 PF00294 pfkB family carbohydrate kinase VPUCM_RS02100 PF01467 Cytidylyltransferase-like VPUCM_RS02105 PF02321 Outer membrane efflux protein VPUCM_RS02110 PF00293 NUDIX domain VPUCM_RS02115 PF06853 Protein of unknown function (DUF1249) VPUCM_RS02120 PF00149 Calcineurin-like phosphoesterase VPUCM_RS02125 PF05728 Uncharacterised protein family (UPF0227) VPUCM_RS02130 PF01751 Toprim domain VPUCM_RS02130 PF00986 DNA gyrase B subunit, carboxyl terminus VPUCM_RS02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS02130 PF00204 DNA gyrase B VPUCM_RS02135 PF00521 DNA gyrase/topoisomerase IV, subunit A VPUCM_RS02135 PF03989 DNA gyrase C-terminal domain, beta-propeller VPUCM_RS02140 PF13180 PDZ domain VPUCM_RS02145 PF00595 PDZ domain VPUCM_RS02150 PF06295 Protein of unknown function (DUF1043) VPUCM_RS02155 PF03969 AFG1-like ATPase VPUCM_RS02160 PF00572 Ribosomal protein L13 VPUCM_RS02165 PF00380 Ribosomal protein S9/S16 VPUCM_RS02170 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VPUCM_RS02170 PF00355 Rieske [2Fe-2S] domain VPUCM_RS02175 PF00033 Cytochrome b/b6/petB VPUCM_RS02175 PF00032 Cytochrome b(C-terminal)/b6/petD VPUCM_RS02180 PF02167 Cytochrome C1 family VPUCM_RS02185 PF00043 Glutathione S-transferase, C-terminal domain VPUCM_RS02185 PF02798 Glutathione S-transferase, N-terminal domain VPUCM_RS02190 PF04386 Stringent starvation protein B VPUCM_RS02195 PF04972 BON domain VPUCM_RS02200 PF13580 SIS domain VPUCM_RS02205 PF02021 Uncharacterised protein family UPF0102 VPUCM_RS02210 PF04348 LppC putative lipoprotein VPUCM_RS02215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VPUCM_RS02220 PF01795 MraW methylase family VPUCM_RS02225 PF04999 Cell division protein FtsL VPUCM_RS02230 PF03717 Penicillin-binding Protein dimerisation domain VPUCM_RS02230 PF00905 Penicillin binding protein transpeptidase domain VPUCM_RS02235 PF08245 Mur ligase middle domain VPUCM_RS02235 PF02875 Mur ligase family, glutamate ligase domain VPUCM_RS02235 PF01225 Mur ligase family, catalytic domain VPUCM_RS02240 PF01225 Mur ligase family, catalytic domain VPUCM_RS02240 PF08245 Mur ligase middle domain VPUCM_RS02240 PF02875 Mur ligase family, glutamate ligase domain VPUCM_RS02245 PF00953 Glycosyl transferase family 4 VPUCM_RS02245 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VPUCM_RS02250 PF08245 Mur ligase middle domain VPUCM_RS02250 PF02875 Mur ligase family, glutamate ligase domain VPUCM_RS02255 PF01098 Cell cycle protein VPUCM_RS02260 PF03033 Glycosyltransferase family 28 N-terminal domain VPUCM_RS02260 PF04101 Glycosyltransferase family 28 C-terminal domain VPUCM_RS02265 PF01225 Mur ligase family, catalytic domain VPUCM_RS02265 PF08245 Mur ligase middle domain VPUCM_RS02265 PF02875 Mur ligase family, glutamate ligase domain VPUCM_RS02270 PF08478 POTRA domain, FtsQ-type VPUCM_RS02270 PF03799 Cell division protein FtsQ VPUCM_RS02275 PF02491 SHS2 domain inserted in FTSA VPUCM_RS02280 PF12327 FtsZ family, C-terminal domain VPUCM_RS02280 PF00091 Tubulin/FtsZ family, GTPase domain VPUCM_RS02285 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VPUCM_RS02295 PF07517 SecA DEAD-like domain VPUCM_RS02295 PF07516 SecA Wing and Scaffold domain VPUCM_RS02295 PF01043 SecA preprotein cross-linking domain VPUCM_RS02295 PF02810 SEC-C motif VPUCM_RS02300 PF00293 NUDIX domain VPUCM_RS02305 PF05173 Dihydrodipicolinate reductase, C-terminus VPUCM_RS02305 PF01113 Dihydrodipicolinate reductase, N-terminus VPUCM_RS02310 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VPUCM_RS02310 PF00117 Glutamine amidotransferase class-I VPUCM_RS02315 PF02142 MGS-like domain VPUCM_RS02315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VPUCM_RS02315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VPUCM_RS02330 PF01925 Sulfite exporter TauE/SafE VPUCM_RS02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS02345 PF03466 LysR substrate binding domain VPUCM_RS02350 PF03458 UPF0126 domain VPUCM_RS02355 PF01497 Periplasmic binding protein VPUCM_RS02360 PF03186 CobD/Cbib protein VPUCM_RS02360 PF17113 Regulatory signalling modulator protein AmpE VPUCM_RS02365 PF01048 Phosphorylase superfamily VPUCM_RS02375 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS02375 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VPUCM_RS02380 PF00310 Glutamine amidotransferases class-II VPUCM_RS02380 PF04898 Glutamate synthase central domain VPUCM_RS02380 PF01645 Conserved region in glutamate synthase VPUCM_RS02380 PF01493 GXGXG motif VPUCM_RS02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS02385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VPUCM_RS02390 PF00310 Glutamine amidotransferases class-II VPUCM_RS02390 PF01493 GXGXG motif VPUCM_RS02390 PF04898 Glutamate synthase central domain VPUCM_RS02390 PF01645 Conserved region in glutamate synthase VPUCM_RS02395 PF16199 Radical_SAM C-terminal domain VPUCM_RS02395 PF04055 Radical SAM superfamily VPUCM_RS02400 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS02400 PF00360 Phytochrome region VPUCM_RS02400 PF00563 EAL domain VPUCM_RS02400 PF01590 GAF domain VPUCM_RS02405 PF18415 Histidine kinase receptor ArcB trans-membrane domain VPUCM_RS02405 PF01627 Hpt domain VPUCM_RS02405 PF00989 PAS fold VPUCM_RS02405 PF00072 Response regulator receiver domain VPUCM_RS02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS02405 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS02415 PF00072 Response regulator receiver domain VPUCM_RS02415 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS02425 PF03737 Aldolase/RraA VPUCM_RS02435 PF00742 Homoserine dehydrogenase VPUCM_RS02435 PF13840 ACT domain VPUCM_RS02435 PF01842 ACT domain VPUCM_RS02435 PF00696 Amino acid kinase family VPUCM_RS02435 PF03447 Homoserine dehydrogenase, NAD binding domain VPUCM_RS02440 PF08544 GHMP kinases C terminal VPUCM_RS02440 PF00288 GHMP kinases N terminal domain VPUCM_RS02445 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_RS02445 PF14821 Threonine synthase N terminus VPUCM_RS02450 PF01228 Glycine radical VPUCM_RS02455 PF01261 Xylose isomerase-like TIM barrel VPUCM_RS02460 PF03167 Uracil DNA glycosylase superfamily VPUCM_RS02475 PF01235 Sodium:alanine symporter family VPUCM_RS02480 PF03883 Peroxide stress protein YaaA VPUCM_RS02485 PF00271 Helicase conserved C-terminal domain VPUCM_RS02485 PF00270 DEAD/DEAH box helicase VPUCM_RS02490 PF05175 Methyltransferase small domain VPUCM_RS02495 PF05525 Branched-chain amino acid transport protein VPUCM_RS02500 PF00258 Flavodoxin VPUCM_RS02505 PF02899 Phage integrase, N-terminal SAM-like domain VPUCM_RS02505 PF00589 Phage integrase family VPUCM_RS02510 PF13098 Thioredoxin-like domain VPUCM_RS02510 PF10411 Disulfide bond isomerase protein N-terminus VPUCM_RS02515 PF01368 DHH family VPUCM_RS02515 PF02272 DHHA1 domain VPUCM_RS02515 PF17768 RecJ OB domain VPUCM_RS02520 PF03462 PCRF domain VPUCM_RS02520 PF00472 RF-1 domain VPUCM_RS02525 PF00152 tRNA synthetases class II (D, K and N) VPUCM_RS02525 PF01336 OB-fold nucleic acid binding domain VPUCM_RS02530 PF00158 Sigma-54 interaction domain VPUCM_RS02530 PF00072 Response regulator receiver domain VPUCM_RS02530 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS02540 PF00248 Aldo/keto reductase family VPUCM_RS02550 PF02976 DNA mismatch repair enzyme MutH VPUCM_RS02555 PF00293 NUDIX domain VPUCM_RS02560 PF05524 PEP-utilising enzyme, N-terminal VPUCM_RS02560 PF01590 GAF domain VPUCM_RS02560 PF02896 PEP-utilising enzyme, TIM barrel domain VPUCM_RS02560 PF00391 PEP-utilising enzyme, mobile domain VPUCM_RS02565 PF01925 Sulfite exporter TauE/SafE VPUCM_RS02570 PF01790 Prolipoprotein diacylglyceryl transferase VPUCM_RS02575 PF00303 Thymidylate synthase VPUCM_RS02585 PF02690 Na+/Pi-cotransporter VPUCM_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS02590 PF03466 LysR substrate binding domain VPUCM_RS02595 PF01022 Bacterial regulatory protein, arsR family VPUCM_RS02600 PF01649 Ribosomal protein S20 VPUCM_RS02605 PF03023 Lipid II flippase MurJ VPUCM_RS02610 PF06574 FAD synthetase VPUCM_RS02610 PF01687 Riboflavin kinase VPUCM_RS02615 PF06827 Zinc finger found in FPG and IleRS VPUCM_RS02615 PF00133 tRNA synthetases class I (I, L, M and V) VPUCM_RS02615 PF08264 Anticodon-binding domain of tRNA VPUCM_RS02620 PF01252 Signal peptidase (SPase) II VPUCM_RS02625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_RS02630 PF02401 LytB protein VPUCM_RS02635 PF04397 LytTr DNA-binding domain VPUCM_RS02635 PF00072 Response regulator receiver domain VPUCM_RS02640 PF06580 Histidine kinase VPUCM_RS02640 PF07694 5TMR of 5TMR-LYT VPUCM_RS02645 PF02554 Carbon starvation protein CstA VPUCM_RS02660 PF13580 SIS domain VPUCM_RS02665 PF03702 Anhydro-N-acetylmuramic acid kinase VPUCM_RS02670 PF00933 Glycosyl hydrolase family 3 N terminal domain VPUCM_RS02675 PF00793 DAHP synthetase I family VPUCM_RS02680 PF02153 Prephenate dehydrogenase VPUCM_RS02680 PF01817 Chorismate mutase type II VPUCM_RS02685 PF01551 Peptidase family M23 VPUCM_RS02685 PF04225 Opacity-associated protein A LysM-like domain VPUCM_RS02690 PF07238 PilZ domain VPUCM_RS02700 PF12848 ABC transporter VPUCM_RS02700 PF00005 ABC transporter VPUCM_RS02705 PF01464 Transglycosylase SLT domain VPUCM_RS02705 PF14718 Soluble lytic murein transglycosylase L domain VPUCM_RS02710 PF01371 Trp repressor protein VPUCM_RS02715 PF01931 Protein of unknown function DUF84 VPUCM_RS02720 PF01817 Chorismate mutase type II VPUCM_RS02720 PF00800 Prephenate dehydratase VPUCM_RS02725 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VPUCM_RS02730 PF01464 Transglycosylase SLT domain VPUCM_RS02735 PF13525 Outer membrane lipoprotein VPUCM_RS02740 PF01479 S4 domain VPUCM_RS02740 PF00849 RNA pseudouridylate synthase VPUCM_RS02745 PF02578 Multi-copper polyphenol oxidoreductase laccase VPUCM_RS02750 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS02750 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_RS02750 PF07724 AAA domain (Cdc48 subfamily) VPUCM_RS02750 PF17871 AAA lid domain VPUCM_RS02750 PF02861 Clp amino terminal domain, pathogenicity island component VPUCM_RS02795 PF03411 Penicillin-insensitive murein endopeptidase VPUCM_RS02805 PF00037 4Fe-4S binding domain VPUCM_RS02810 PF01136 Peptidase family U32 VPUCM_RS02810 PF16325 Peptidase family U32 C-terminal domain VPUCM_RS02815 PF04381 Putative exonuclease, RdgC VPUCM_RS02820 PF00072 Response regulator receiver domain VPUCM_RS02820 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS02825 PF11808 Phosphate regulon sensor protein PhoR VPUCM_RS02825 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS02825 PF00989 PAS fold VPUCM_RS02830 PF12849 PBP superfamily domain VPUCM_RS02835 PF02541 Ppx/GppA phosphatase family VPUCM_RS02840 PF17941 Polyphosphate kinase C-terminal domain 1 VPUCM_RS02840 PF13090 Polyphosphate kinase C-terminal domain 2 VPUCM_RS02840 PF02503 Polyphosphate kinase middle domain VPUCM_RS02840 PF13089 Polyphosphate kinase N-terminal domain VPUCM_RS02845 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS02850 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS02855 PF00005 ABC transporter VPUCM_RS02860 PF01895 PhoU domain VPUCM_RS02865 PF03976 Polyphosphate kinase 2 (PPK2) VPUCM_RS02870 PF03932 CutC family VPUCM_RS02875 PF10417 C-terminal domain of 1-Cys peroxiredoxin VPUCM_RS02875 PF00578 AhpC/TSA family VPUCM_RS02880 PF03466 LysR substrate binding domain VPUCM_RS02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS02885 PF01274 Malate synthase VPUCM_RS02890 PF00463 Isocitrate lyase family VPUCM_RS02895 PF00571 CBS domain VPUCM_RS02905 PF02547 Queuosine biosynthesis protein VPUCM_RS02910 PF01702 Queuine tRNA-ribosyltransferase VPUCM_RS02915 PF02699 Preprotein translocase subunit VPUCM_RS02920 PF07549 SecD/SecF GG Motif VPUCM_RS02920 PF02355 Protein export membrane protein VPUCM_RS02920 PF13721 SecD export protein N-terminal TM region VPUCM_RS02925 PF02355 Protein export membrane protein VPUCM_RS02925 PF07549 SecD/SecF GG Motif VPUCM_RS02930 PF00459 Inositol monophosphatase family VPUCM_RS02935 PF00588 SpoU rRNA Methylase family VPUCM_RS02940 PF02082 Transcriptional regulator VPUCM_RS02945 PF00266 Aminotransferase class-V VPUCM_RS02950 PF01592 NifU-like N terminal domain VPUCM_RS02955 PF01521 Iron-sulphur cluster biosynthesis VPUCM_RS02960 PF07743 HSCB C-terminal oligomerisation domain VPUCM_RS02960 PF00226 DnaJ domain VPUCM_RS02965 PF00012 Hsp70 protein VPUCM_RS02970 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_RS02975 PF04384 Iron-sulphur cluster assembly VPUCM_RS02980 PF12404 Peptidase VPUCM_RS02980 PF00883 Cytosol aminopeptidase family, catalytic domain VPUCM_RS02985 PF00334 Nucleoside diphosphate kinase VPUCM_RS02990 PF04055 Radical SAM superfamily VPUCM_RS02995 PF13464 Domain of unknown function (DUF4115) VPUCM_RS03000 PF04551 GcpE protein VPUCM_RS03005 PF03129 Anticodon binding domain VPUCM_RS03005 PF13393 Histidyl-tRNA synthetase VPUCM_RS03010 PF09976 Tetratricopeptide repeat-like domain VPUCM_RS03015 PF13360 PQQ-like domain VPUCM_RS03020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VPUCM_RS03020 PF01926 50S ribosome-binding GTPase VPUCM_RS03035 PF13742 OB-fold nucleic acid binding domain VPUCM_RS03035 PF02601 Exonuclease VII, large subunit VPUCM_RS03040 PF00478 IMP dehydrogenase / GMP reductase domain VPUCM_RS03040 PF00571 CBS domain VPUCM_RS03045 PF00117 Glutamine amidotransferase class-I VPUCM_RS03045 PF00958 GMP synthase C terminal domain VPUCM_RS03045 PF02540 NAD synthase VPUCM_RS03050 PF13356 Arm DNA-binding domain VPUCM_RS03050 PF00589 Phage integrase family VPUCM_RS03120 PF03553 Na+/H+ antiporter family VPUCM_RS03125 PF06483 Chitinase C VPUCM_RS03125 PF00704 Glycosyl hydrolases family 18 VPUCM_RS03130 PF01184 GPR1/FUN34/yaaH family VPUCM_RS03140 PF01235 Sodium:alanine symporter family VPUCM_RS03145 PF01266 FAD dependent oxidoreductase VPUCM_RS03150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS03150 PF03466 LysR substrate binding domain VPUCM_RS03165 PF07969 Amidohydrolase family VPUCM_RS03170 PF01053 Cys/Met metabolism PLP-dependent enzyme VPUCM_RS03175 PF00202 Aminotransferase class-III VPUCM_RS03195 PF00583 Acetyltransferase (GNAT) family VPUCM_RS03195 PF00795 Carbon-nitrogen hydrolase VPUCM_RS03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS03200 PF03466 LysR substrate binding domain VPUCM_RS03220 PF13737 Transposase DDE domain VPUCM_RS03225 PF07728 AAA domain (dynein-related subfamily) VPUCM_RS03225 PF12102 Domain of unknown function (DUF3578) VPUCM_RS03240 PF13276 HTH-like domain VPUCM_RS03240 PF00665 Integrase core domain VPUCM_RS03240 PF13333 Integrase core domain VPUCM_RS03245 PF01527 Transposase VPUCM_RS03250 PF13356 Arm DNA-binding domain VPUCM_RS03250 PF00589 Phage integrase family VPUCM_RS03255 PF01668 SmpB protein VPUCM_RS03260 PF03364 Polyketide cyclase / dehydrase and lipid transport VPUCM_RS03265 PF03658 RnfH family Ubiquitin VPUCM_RS03270 PF04355 SmpA / OmlA family VPUCM_RS03275 PF02463 RecF/RecN/SMC N terminal domain VPUCM_RS03285 PF01513 ATP-NAD kinase VPUCM_RS03290 PF01025 GrpE VPUCM_RS03295 PF00375 Sodium:dicarboxylate symporter family VPUCM_RS03300 PF00012 Hsp70 protein VPUCM_RS03305 PF00226 DnaJ domain VPUCM_RS03305 PF00684 DnaJ central domain VPUCM_RS03305 PF01556 DnaJ C terminal domain VPUCM_RS03310 PF07963 Prokaryotic N-terminal methylation motif VPUCM_RS03310 PF00114 Pilin (bacterial filament) VPUCM_RS03335 PF03806 AbgT putative transporter family VPUCM_RS03340 PF14437 MafB19-like deaminase VPUCM_RS03350 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VPUCM_RS03355 PF13609 Gram-negative porin VPUCM_RS03360 PF03449 Transcription elongation factor, N-terminal VPUCM_RS03360 PF01272 Transcription elongation factor, GreA/GreB, C-term VPUCM_RS03365 PF01985 CRS1 / YhbY (CRM) domain VPUCM_RS03370 PF01728 FtsJ-like methyltransferase VPUCM_RS03375 PF06480 FtsH Extracellular VPUCM_RS03375 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS03375 PF17862 AAA+ lid domain VPUCM_RS03375 PF01434 Peptidase family M41 VPUCM_RS03380 PF00809 Pterin binding enzyme VPUCM_RS03385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VPUCM_RS03385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VPUCM_RS03385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VPUCM_RS03385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VPUCM_RS03395 PF03840 Preprotein translocase SecG subunit VPUCM_RS03410 PF17384 RimP C-terminal SH3 domain VPUCM_RS03410 PF02576 RimP N-terminal domain VPUCM_RS03415 PF13184 NusA-like KH domain VPUCM_RS03415 PF08529 NusA N-terminal domain VPUCM_RS03415 PF00575 S1 RNA binding domain VPUCM_RS03420 PF08364 Bacterial translation initiation factor IF-2 associated region VPUCM_RS03420 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS03420 PF11987 Translation-initiation factor 2 VPUCM_RS03420 PF04760 Translation initiation factor IF-2, N-terminal region VPUCM_RS03425 PF02033 Ribosome-binding factor A VPUCM_RS03430 PF09157 Pseudouridine synthase II TruB, C-terminal VPUCM_RS03430 PF16198 tRNA pseudouridylate synthase B C-terminal domain VPUCM_RS03430 PF01509 TruB family pseudouridylate synthase (N terminal domain) VPUCM_RS03435 PF00312 Ribosomal protein S15 VPUCM_RS03440 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VPUCM_RS03440 PF00013 KH domain VPUCM_RS03440 PF01138 3' exoribonuclease family, domain 1 VPUCM_RS03440 PF00575 S1 RNA binding domain VPUCM_RS03440 PF03725 3' exoribonuclease family, domain 2 VPUCM_RS03445 PF13181 Tetratricopeptide repeat VPUCM_RS03445 PF07719 Tetratricopeptide repeat VPUCM_RS03455 PF01554 MatE VPUCM_RS03460 PF01136 Peptidase family U32 VPUCM_RS03465 PF01136 Peptidase family U32 VPUCM_RS03470 PF03707 Bacterial signalling protein N terminal repeat VPUCM_RS03470 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS03470 PF00563 EAL domain VPUCM_RS03475 PF02036 SCP-2 sterol transfer family VPUCM_RS03480 PF13508 Acetyltransferase (GNAT) domain VPUCM_RS03525 PF13438 Domain of unknown function (DUF4113) VPUCM_RS03525 PF00817 impB/mucB/samB family VPUCM_RS03525 PF11799 impB/mucB/samB family C-terminal domain VPUCM_RS03530 PF00717 Peptidase S24-like VPUCM_RS03565 PF13340 Putative transposase of IS4/5 family (DUF4096) VPUCM_RS03580 PF00011 Hsp20/alpha crystallin family VPUCM_RS03585 PF07724 AAA domain (Cdc48 subfamily) VPUCM_RS03585 PF17871 AAA lid domain VPUCM_RS03585 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS03585 PF02861 Clp amino terminal domain, pathogenicity island component VPUCM_RS03585 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_RS03595 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS03595 PF00563 EAL domain VPUCM_RS03595 PF03707 Bacterial signalling protein N terminal repeat VPUCM_RS03610 PF01435 Peptidase family M48 VPUCM_RS03615 PF00595 PDZ domain VPUCM_RS03620 PF07733 Bacterial DNA polymerase III alpha NTPase domain VPUCM_RS03620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VPUCM_RS03620 PF14579 Helix-hairpin-helix motif VPUCM_RS03620 PF02811 PHP domain VPUCM_RS03620 PF14480 DNA polymerase III polC-type N-terminus I VPUCM_RS03620 PF01336 OB-fold nucleic acid binding domain VPUCM_RS03620 PF11490 DNA polymerase III polC-type N-terminus II VPUCM_RS03620 PF00929 Exonuclease VPUCM_RS03630 PF02384 N-6 DNA Methylase VPUCM_RS03630 PF12161 HsdM N-terminal domain VPUCM_RS03640 PF12008 Type I restriction and modification enzyme - subunit R C terminal VPUCM_RS03640 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VPUCM_RS03640 PF18766 SWI2/SNF2 ATPase VPUCM_RS03730 PF13098 Thioredoxin-like domain VPUCM_RS03730 PF10411 Disulfide bond isomerase protein N-terminus VPUCM_RS03745 PF10502 Signal peptidase, peptidase S26 VPUCM_RS03755 PF06834 TraU protein VPUCM_RS03760 PF06986 Type-1V conjugative transfer system mating pair stabilisation VPUCM_RS03775 PF04231 Endonuclease I VPUCM_RS03790 PF00436 Single-strand binding protein family VPUCM_RS03805 PF08406 CbbQ/NirQ/NorQ C-terminal VPUCM_RS03805 PF07728 AAA domain (dynein-related subfamily) VPUCM_RS03825 PF00092 von Willebrand factor type A domain VPUCM_RS03830 PF04002 RadC-like JAB domain VPUCM_RS03870 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS03870 PF00072 Response regulator receiver domain VPUCM_RS03870 PF00158 Sigma-54 interaction domain VPUCM_RS03885 PF00011 Hsp20/alpha crystallin family VPUCM_RS03890 PF00011 Hsp20/alpha crystallin family VPUCM_RS03895 PF02254 TrkA-N domain VPUCM_RS03895 PF02080 TrkA-C domain VPUCM_RS03895 PF00999 Sodium/hydrogen exchanger family VPUCM_RS03905 PF01025 GrpE VPUCM_RS03910 PF00012 Hsp70 protein VPUCM_RS03925 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS03925 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_RS03925 PF02861 Clp amino terminal domain, pathogenicity island component VPUCM_RS03925 PF17871 AAA lid domain VPUCM_RS03925 PF07724 AAA domain (Cdc48 subfamily) VPUCM_RS03930 PF00226 DnaJ domain VPUCM_RS03930 PF01556 DnaJ C terminal domain VPUCM_RS03940 PF01435 Peptidase family M48 VPUCM_RS03960 PF01116 Fructose-bisphosphate aldolase class-II VPUCM_RS03965 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS03985 PF06122 Conjugative relaxosome accessory transposon protein VPUCM_RS04030 PF01381 Helix-turn-helix VPUCM_RS04030 PF00717 Peptidase S24-like VPUCM_RS04035 PF16658 Class II release factor RF3, C-terminal domain VPUCM_RS04035 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS04035 PF03144 Elongation factor Tu domain 2 VPUCM_RS04045 PF01026 TatD related DNase VPUCM_RS04050 PF07662 Na+ dependent nucleoside transporter C-terminus VPUCM_RS04050 PF07670 Nucleoside recognition VPUCM_RS04050 PF01773 Na+ dependent nucleoside transporter N-terminus VPUCM_RS04055 PF01791 DeoC/LacD family aldolase VPUCM_RS04060 PF00591 Glycosyl transferase family, a/b domain VPUCM_RS04060 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VPUCM_RS04060 PF02885 Glycosyl transferase family, helical bundle domain VPUCM_RS04065 PF01676 Metalloenzyme superfamily VPUCM_RS04070 PF01048 Phosphorylase superfamily VPUCM_RS04080 PF18429 Domain of unknown function (DUF5609) VPUCM_RS04090 PF18073 Rubredoxin metal binding domain VPUCM_RS04095 PF00679 Elongation factor G C-terminus VPUCM_RS04095 PF03144 Elongation factor Tu domain 2 VPUCM_RS04095 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS04095 PF03764 Elongation factor G, domain IV VPUCM_RS04095 PF14492 Elongation Factor G, domain II VPUCM_RS04100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS04100 PF03466 LysR substrate binding domain VPUCM_RS04110 PF00501 AMP-binding enzyme VPUCM_RS04115 PF12833 Helix-turn-helix domain VPUCM_RS04115 PF02805 Metal binding domain of Ada VPUCM_RS04140 PF13629 Pilus formation protein N terminal region VPUCM_RS04140 PF04972 BON domain VPUCM_RS04140 PF00263 Bacterial type II and III secretion system protein VPUCM_RS04170 PF00437 Type II/IV secretion system protein VPUCM_RS04200 PF03466 LysR substrate binding domain VPUCM_RS04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS04205 PF13520 Amino acid permease VPUCM_RS04210 PF04074 YhcH/YjgK/YiaL VPUCM_RS04215 PF02837 Glycosyl hydrolases family 2, sugar binding domain VPUCM_RS04215 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VPUCM_RS04215 PF00703 Glycosyl hydrolases family 2 VPUCM_RS04215 PF02929 Beta galactosidase small chain VPUCM_RS04215 PF16353 Domain of unknown function(DUF4981) VPUCM_RS04220 PF00356 Bacterial regulatory proteins, lacI family VPUCM_RS04225 PF16363 GDP-mannose 4,6 dehydratase VPUCM_RS04230 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VPUCM_RS04230 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VPUCM_RS04235 PF08544 GHMP kinases C terminal VPUCM_RS04235 PF00288 GHMP kinases N terminal domain VPUCM_RS04235 PF10509 Galactokinase galactose-binding signature VPUCM_RS04240 PF01263 Aldose 1-epimerase VPUCM_RS04245 PF00474 Sodium:solute symporter family VPUCM_RS04255 PF07733 Bacterial DNA polymerase III alpha NTPase domain VPUCM_RS04255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VPUCM_RS04255 PF02811 PHP domain VPUCM_RS04255 PF00929 Exonuclease VPUCM_RS04255 PF14579 Helix-hairpin-helix motif VPUCM_RS04260 PF00356 Bacterial regulatory proteins, lacI family VPUCM_RS04265 PF01588 Putative tRNA binding domain VPUCM_RS04280 PF01544 CorA-like Mg2+ transporter protein VPUCM_RS04285 PF01266 FAD dependent oxidoreductase VPUCM_RS04285 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VPUCM_RS04290 PF08220 DeoR-like helix-turn-helix domain VPUCM_RS04290 PF00455 DeoR C terminal sensor domain VPUCM_RS04295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VPUCM_RS04295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VPUCM_RS04300 PF00230 Major intrinsic protein VPUCM_RS04305 PF07690 Major Facilitator Superfamily VPUCM_RS04310 PF03009 Glycerophosphoryl diester phosphodiesterase family VPUCM_RS04315 PF14602 Hexapeptide repeat of succinyl-transferase VPUCM_RS04315 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VPUCM_RS04320 PF07130 YebG protein VPUCM_RS04325 PF03466 LysR substrate binding domain VPUCM_RS04325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS04335 PF11893 Domain of unknown function (DUF3413) VPUCM_RS04335 PF00884 Sulfatase VPUCM_RS04340 PF17946 RecC C-terminal domain VPUCM_RS04350 PF13361 UvrD-like helicase C-terminal domain VPUCM_RS04350 PF00580 UvrD/REP helicase N-terminal domain VPUCM_RS04350 PF12705 PD-(D/E)XK nuclease superfamily VPUCM_RS04355 PF13538 UvrD-like helicase C-terminal domain VPUCM_RS04370 PF00696 Amino acid kinase family VPUCM_RS04370 PF00583 Acetyltransferase (GNAT) family VPUCM_RS04380 PF03562 MltA specific insert domain VPUCM_RS04380 PF06725 3D domain VPUCM_RS04385 PF00899 ThiF family VPUCM_RS04390 PF02657 Fe-S metabolism associated domain VPUCM_RS04395 PF17158 Membrane-associated sensor, integral membrane domain VPUCM_RS04395 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS04400 PF00266 Aminotransferase class-V VPUCM_RS04405 PF01965 DJ-1/PfpI family VPUCM_RS04410 PF02558 Ketopantoate reductase PanE/ApbA VPUCM_RS04410 PF08546 Ketopantoate reductase PanE/ApbA C terminal VPUCM_RS04415 PF03502 Nucleoside-specific channel-forming protein, Tsx VPUCM_RS04435 PF04542 Sigma-70 region 2 VPUCM_RS04435 PF04545 Sigma-70, region 4 VPUCM_RS04445 PF07690 Major Facilitator Superfamily VPUCM_RS04450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VPUCM_RS04455 PF03923 Uncharacterized lipoprotein VPUCM_RS04455 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VPUCM_RS04460 PF05175 Methyltransferase small domain VPUCM_RS04465 PF01722 BolA-like protein VPUCM_RS04475 PF11973 NQRA C-terminal domain VPUCM_RS04475 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VPUCM_RS04480 PF03116 NQR2, RnfD, RnfE family VPUCM_RS04485 PF04205 FMN-binding domain VPUCM_RS04490 PF02508 Rnf-Nqr subunit, membrane protein VPUCM_RS04495 PF02508 Rnf-Nqr subunit, membrane protein VPUCM_RS04500 PF00175 Oxidoreductase NAD-binding domain VPUCM_RS04500 PF00970 Oxidoreductase FAD-binding domain VPUCM_RS04500 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_RS04505 PF02424 ApbE family VPUCM_RS04520 PF00817 impB/mucB/samB family VPUCM_RS04520 PF11799 impB/mucB/samB family C-terminal domain VPUCM_RS04520 PF11798 IMS family HHH motif VPUCM_RS04525 PF16124 RecQ zinc-binding VPUCM_RS04525 PF09382 RQC domain VPUCM_RS04525 PF00270 DEAD/DEAH box helicase VPUCM_RS04525 PF00271 Helicase conserved C-terminal domain VPUCM_RS04525 PF00570 HRDC domain VPUCM_RS04530 PF03449 Transcription elongation factor, N-terminal VPUCM_RS04530 PF01272 Transcription elongation factor, GreA/GreB, C-term VPUCM_RS04545 PF00209 Sodium:neurotransmitter symporter family VPUCM_RS04555 PF06786 Uncharacterised protein family (UPF0253) VPUCM_RS04565 PF04073 Aminoacyl-tRNA editing domain VPUCM_RS04565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VPUCM_RS04565 PF03129 Anticodon binding domain VPUCM_RS04570 PF18389 TrmO C-terminal domain VPUCM_RS04570 PF01980 tRNA-methyltransferase O VPUCM_RS04575 PF01197 Ribosomal protein L31 VPUCM_RS04580 PF03806 AbgT putative transporter family VPUCM_RS04585 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VPUCM_RS04605 PF00849 RNA pseudouridylate synthase VPUCM_RS04605 PF04287 tRNA pseudouridine synthase C VPUCM_RS04610 PF00849 RNA pseudouridylate synthase VPUCM_RS04615 PF11944 Protein of unknown function (DUF3461) VPUCM_RS04620 PF01909 Nucleotidyltransferase domain VPUCM_RS04620 PF01842 ACT domain VPUCM_RS04620 PF08335 GlnD PII-uridylyltransferase VPUCM_RS04620 PF01966 HD domain VPUCM_RS04625 PF00557 Metallopeptidase family M24 VPUCM_RS04630 PF00318 Ribosomal protein S2 VPUCM_RS04635 PF00889 Elongation factor TS VPUCM_RS04640 PF00696 Amino acid kinase family VPUCM_RS04645 PF01765 Ribosome recycling factor VPUCM_RS04650 PF01255 Putative undecaprenyl diphosphate synthase VPUCM_RS04660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VPUCM_RS04660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VPUCM_RS04660 PF13288 DXP reductoisomerase C-terminal domain VPUCM_RS04665 PF02163 Peptidase family M50 VPUCM_RS04665 PF17820 PDZ domain VPUCM_RS04670 PF07244 Surface antigen variable number repeat VPUCM_RS04670 PF01103 Surface antigen VPUCM_RS04675 PF03938 Outer membrane protein (OmpH-like) VPUCM_RS04680 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_RS04680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VPUCM_RS04685 PF07977 FabA-like domain VPUCM_RS04690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VPUCM_RS04690 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_RS04695 PF02684 Lipid-A-disaccharide synthetase VPUCM_RS04700 PF01351 Ribonuclease HII VPUCM_RS04705 PF02811 PHP domain VPUCM_RS04705 PF01336 OB-fold nucleic acid binding domain VPUCM_RS04705 PF14579 Helix-hairpin-helix motif VPUCM_RS04705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VPUCM_RS04705 PF07733 Bacterial DNA polymerase III alpha NTPase domain VPUCM_RS04710 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VPUCM_RS04715 PF01171 PP-loop family VPUCM_RS04715 PF11734 TilS substrate C-terminal domain VPUCM_RS04715 PF09179 TilS substrate binding domain VPUCM_RS04720 PF00034 Cytochrome c VPUCM_RS04725 PF00543 Nitrogen regulatory protein P-II VPUCM_RS04730 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_RS04740 PF01464 Transglycosylase SLT domain VPUCM_RS04740 PF01476 LysM domain VPUCM_RS04745 PF00753 Metallo-beta-lactamase superfamily VPUCM_RS04745 PF16123 Hydroxyacylglutathione hydrolase C-terminus VPUCM_RS04750 PF08241 Methyltransferase domain VPUCM_RS04755 PF00075 RNase H VPUCM_RS04760 PF00929 Exonuclease VPUCM_RS04780 PF00583 Acetyltransferase (GNAT) family VPUCM_RS04785 PF00916 Sulfate permease family VPUCM_RS04785 PF01740 STAS domain VPUCM_RS04790 PF09317 Domain of unknown function (DUF1974) VPUCM_RS04790 PF02770 Acyl-CoA dehydrogenase, middle domain VPUCM_RS04790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_RS04790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_RS04795 PF13580 SIS domain VPUCM_RS04800 PF13230 Glutamine amidotransferases class-II VPUCM_RS04805 PF00950 ABC 3 transport family VPUCM_RS04810 PF00005 ABC transporter VPUCM_RS04815 PF01297 Zinc-uptake complex component A periplasmic VPUCM_RS04820 PF12833 Helix-turn-helix domain VPUCM_RS04820 PF02311 AraC-like ligand binding domain VPUCM_RS04825 PF04023 FeoA domain VPUCM_RS04830 PF07670 Nucleoside recognition VPUCM_RS04830 PF07664 Ferrous iron transport protein B C terminus VPUCM_RS04830 PF17910 FeoB cytosolic helical domain VPUCM_RS04830 PF02421 Ferrous iron transport protein B VPUCM_RS04845 PF00750 tRNA synthetases class I (R) VPUCM_RS04845 PF03485 Arginyl tRNA synthetase N terminal domain VPUCM_RS04845 PF05746 DALR anticodon binding domain VPUCM_RS04850 PF06185 YecM protein VPUCM_RS04855 PF01842 ACT domain VPUCM_RS04855 PF00551 Formyl transferase VPUCM_RS04860 PF13307 Helicase C-terminal domain VPUCM_RS04860 PF04851 Type III restriction enzyme, res subunit VPUCM_RS04865 PF00814 Glycoprotease family VPUCM_RS04880 PF00561 alpha/beta hydrolase fold VPUCM_RS04885 PF13193 AMP-binding enzyme C-terminal domain VPUCM_RS04885 PF00501 AMP-binding enzyme VPUCM_RS04890 PF01612 3'-5' exonuclease VPUCM_RS04890 PF00570 HRDC domain VPUCM_RS04895 PF03776 Septum formation topological specificity factor MinE VPUCM_RS04900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VPUCM_RS04905 PF03775 Septum formation inhibitor MinC, C-terminal domain VPUCM_RS04905 PF05209 Septum formation inhibitor MinC, N-terminal domain VPUCM_RS04910 PF05166 YcgL domain VPUCM_RS04915 PF13406 Transglycosylase SLT domain VPUCM_RS04920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS04920 PF03466 LysR substrate binding domain VPUCM_RS04925 PF01773 Na+ dependent nucleoside transporter N-terminus VPUCM_RS04925 PF07662 Na+ dependent nucleoside transporter C-terminus VPUCM_RS04925 PF07670 Nucleoside recognition VPUCM_RS04930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VPUCM_RS04930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VPUCM_RS04945 PF00109 Beta-ketoacyl synthase, N-terminal domain VPUCM_RS04945 PF02801 Beta-ketoacyl synthase, C-terminal domain VPUCM_RS04955 PF07977 FabA-like domain VPUCM_RS04960 PF00109 Beta-ketoacyl synthase, N-terminal domain VPUCM_RS04960 PF02801 Beta-ketoacyl synthase, C-terminal domain VPUCM_RS04985 PF00221 Aromatic amino acid lyase VPUCM_RS04990 PF00535 Glycosyl transferase family 2 VPUCM_RS04995 PF07977 FabA-like domain VPUCM_RS05010 PF00550 Phosphopantetheine attachment site VPUCM_RS05015 PF00550 Phosphopantetheine attachment site VPUCM_RS05040 PF04820 Tryptophan halogenase VPUCM_RS05050 PF00571 CBS domain VPUCM_RS05050 PF01595 Cyclin M transmembrane N-terminal domain VPUCM_RS05050 PF03471 Transporter associated domain VPUCM_RS05055 PF00271 Helicase conserved C-terminal domain VPUCM_RS05055 PF00270 DEAD/DEAH box helicase VPUCM_RS05060 PF02080 TrkA-C domain VPUCM_RS05060 PF02254 TrkA-N domain VPUCM_RS05065 PF02386 Cation transport protein VPUCM_RS05080 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VPUCM_RS05085 PF03480 Bacterial extracellular solute-binding protein, family 7 VPUCM_RS05090 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VPUCM_RS05095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VPUCM_RS05105 PF00072 Response regulator receiver domain VPUCM_RS05105 PF00158 Sigma-54 interaction domain VPUCM_RS05105 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS05110 PF02743 Cache domain VPUCM_RS05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS05110 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS05120 PF05697 Bacterial trigger factor protein (TF) VPUCM_RS05120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_RS05120 PF05698 Bacterial trigger factor protein (TF) C-terminus VPUCM_RS05125 PF00574 Clp protease VPUCM_RS05130 PF06689 ClpX C4-type zinc finger VPUCM_RS05130 PF07724 AAA domain (Cdc48 subfamily) VPUCM_RS05130 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_RS05135 PF05362 Lon protease (S16) C-terminal proteolytic domain VPUCM_RS05135 PF02190 ATP-dependent protease La (LON) substrate-binding domain VPUCM_RS05135 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS05140 PF00216 Bacterial DNA-binding protein VPUCM_RS05145 PF13145 PPIC-type PPIASE domain VPUCM_RS05165 PF01966 HD domain VPUCM_RS05165 PF13286 Phosphohydrolase-associated domain VPUCM_RS05175 PF00155 Aminotransferase class I and II VPUCM_RS05180 PF00425 chorismate binding enzyme VPUCM_RS05185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VPUCM_RS05185 PF16582 Middle domain of thiamine pyrophosphate VPUCM_RS05185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VPUCM_RS05190 PF12697 Alpha/beta hydrolase family VPUCM_RS05195 PF00378 Enoyl-CoA hydratase/isomerase VPUCM_RS05200 PF13378 Enolase C-terminal domain-like VPUCM_RS05205 PF13193 AMP-binding enzyme C-terminal domain VPUCM_RS05205 PF00501 AMP-binding enzyme VPUCM_RS05215 PF03601 Conserved hypothetical protein 698 VPUCM_RS05220 PF07690 Major Facilitator Superfamily VPUCM_RS05265 PF13533 Biotin-lipoyl like VPUCM_RS05270 PF00873 AcrB/AcrD/AcrF family VPUCM_RS05290 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_RS05295 PF13404 AsnC-type helix-turn-helix domain VPUCM_RS05295 PF01037 Lrp/AsnC ligand binding domain VPUCM_RS05310 PF09619 Type III secretion system lipoprotein chaperone (YscW) VPUCM_RS05315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VPUCM_RS05325 PF17152 Periplasmic sensor domain VPUCM_RS05325 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS05390 PF07693 KAP family P-loop domain VPUCM_RS05405 PF00588 SpoU rRNA Methylase family VPUCM_RS05405 PF08032 RNA 2'-O ribose methyltransferase substrate binding VPUCM_RS05410 PF11953 Domain of unknown function (DUF3470) VPUCM_RS05410 PF00037 4Fe-4S binding domain VPUCM_RS05420 PF00571 CBS domain VPUCM_RS05420 PF00478 IMP dehydrogenase / GMP reductase domain VPUCM_RS05425 PF00403 Heavy-metal-associated domain VPUCM_RS05430 PF01048 Phosphorylase superfamily VPUCM_RS05440 PF00672 HAMP domain VPUCM_RS05440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS05445 PF01230 HIT domain VPUCM_RS05460 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VPUCM_RS05460 PF13036 Peptidoglycan-synthase activator LpoB VPUCM_RS05470 PF05728 Uncharacterised protein family (UPF0227) VPUCM_RS05475 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS05490 PF02559 CarD-like/TRCF domain VPUCM_RS05490 PF00271 Helicase conserved C-terminal domain VPUCM_RS05490 PF17757 UvrB interaction domain VPUCM_RS05490 PF00270 DEAD/DEAH box helicase VPUCM_RS05490 PF03461 TRCF domain VPUCM_RS05500 PF12704 MacB-like periplasmic core domain VPUCM_RS05500 PF02687 FtsX-like permease family VPUCM_RS05505 PF00005 ABC transporter VPUCM_RS05510 PF12704 MacB-like periplasmic core domain VPUCM_RS05510 PF02687 FtsX-like permease family VPUCM_RS05520 PF13567 Domain of unknown function (DUF4131) VPUCM_RS05520 PF03772 Competence protein VPUCM_RS05520 PF00753 Metallo-beta-lactamase superfamily VPUCM_RS05525 PF00005 ABC transporter VPUCM_RS05525 PF00664 ABC transporter transmembrane region VPUCM_RS05530 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VPUCM_RS05535 PF03966 Trm112p-like protein VPUCM_RS05540 PF02348 Cytidylyltransferase VPUCM_RS05545 PF04293 SpoVR like protein VPUCM_RS05550 PF04285 Protein of unknown function (DUF444) VPUCM_RS05555 PF08298 PrkA AAA domain VPUCM_RS05555 PF06798 PrkA serine protein kinase C-terminal domain VPUCM_RS05560 PF03887 YfbU domain VPUCM_RS05570 PF04055 Radical SAM superfamily VPUCM_RS05580 PF02901 Pyruvate formate lyase-like VPUCM_RS05580 PF01228 Glycine radical VPUCM_RS05595 PF00005 ABC transporter VPUCM_RS05600 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_RS05605 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS05610 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS05625 PF02151 UvrB/uvrC motif VPUCM_RS05625 PF00271 Helicase conserved C-terminal domain VPUCM_RS05625 PF12344 Ultra-violet resistance protein B VPUCM_RS05625 PF17757 UvrB interaction domain VPUCM_RS05625 PF04851 Type III restriction enzyme, res subunit VPUCM_RS05630 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS05630 PF00072 Response regulator receiver domain VPUCM_RS05630 PF00158 Sigma-54 interaction domain VPUCM_RS05635 PF01627 Hpt domain VPUCM_RS05640 PF01933 Uncharacterised protein family UPF0052 VPUCM_RS05645 PF04055 Radical SAM superfamily VPUCM_RS05645 PF06463 Molybdenum Cofactor Synthesis C VPUCM_RS05650 PF00994 Probable molybdopterin binding domain VPUCM_RS05655 PF01967 MoaC family VPUCM_RS05660 PF02597 ThiS family VPUCM_RS05665 PF02391 MoaE protein VPUCM_RS05670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS05680 PF12911 N-terminal TM domain of oligopeptide transport permease C VPUCM_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS05685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS05685 PF00005 ABC transporter VPUCM_RS05690 PF00005 ABC transporter VPUCM_RS05690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS05695 PF13409 Glutathione S-transferase, N-terminal domain VPUCM_RS05705 PF13194 Domain of unknown function (DUF4010) VPUCM_RS05710 PF01515 Phosphate acetyl/butaryl transferase VPUCM_RS05710 PF07085 DRTGG domain VPUCM_RS05715 PF00871 Acetokinase family VPUCM_RS05720 PF04217 Protein of unknown function, DUF412 VPUCM_RS05730 PF02653 Branched-chain amino acid transport system / permease component VPUCM_RS05735 PF00005 ABC transporter VPUCM_RS05740 PF00128 Alpha amylase, catalytic domain VPUCM_RS05740 PF02903 Alpha amylase, N-terminal ig-like domain VPUCM_RS05745 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS05745 PF00072 Response regulator receiver domain VPUCM_RS05750 PF02445 Quinolinate synthetase A protein VPUCM_RS05760 PF03994 Domain of Unknown Function (DUF350) VPUCM_RS05770 PF03738 Glutathionylspermidine synthase preATP-grasp VPUCM_RS05780 PF00072 Response regulator receiver domain VPUCM_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS05780 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS05780 PF09308 LuxQ, periplasmic VPUCM_RS05785 PF06610 L-alanine exporter VPUCM_RS05800 PF00665 Integrase core domain VPUCM_RS05800 PF13276 HTH-like domain VPUCM_RS05800 PF13333 Integrase core domain VPUCM_RS05805 PF01527 Transposase VPUCM_RS05850 PF00176 SNF2 family N-terminal domain VPUCM_RS05850 PF00271 Helicase conserved C-terminal domain VPUCM_RS05865 PF02384 N-6 DNA Methylase VPUCM_RS05865 PF12161 HsdM N-terminal domain VPUCM_RS05885 PF00069 Protein kinase domain VPUCM_RS05885 PF03793 PASTA domain VPUCM_RS05900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS05900 PF00672 HAMP domain VPUCM_RS05900 PF12729 Four helix bundle sensory module for signal transduction VPUCM_RS05905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VPUCM_RS05905 PF00529 HlyD membrane-fusion protein of T1SS VPUCM_RS05910 PF00873 AcrB/AcrD/AcrF family VPUCM_RS05925 PF00579 tRNA synthetases class I (W and Y) VPUCM_RS05935 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_RS05940 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VPUCM_RS05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS05950 PF03466 LysR substrate binding domain VPUCM_RS05960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VPUCM_RS05960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VPUCM_RS05965 PF01037 Lrp/AsnC ligand binding domain VPUCM_RS05970 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VPUCM_RS05970 PF09397 Ftsk gamma domain VPUCM_RS05970 PF01580 FtsK/SpoIIIE family VPUCM_RS05970 PF17854 FtsK alpha domain VPUCM_RS05975 PF03548 Outer membrane lipoprotein carrier protein LolA VPUCM_RS05980 PF12002 MgsA AAA+ ATPase C terminal VPUCM_RS05980 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS05980 PF16193 AAA C-terminal domain VPUCM_RS05985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VPUCM_RS05985 PF02403 Seryl-tRNA synthetase N-terminal domain VPUCM_RS06000 PF01258 Prokaryotic dksA/traR C4-type zinc finger VPUCM_RS06005 PF00202 Aminotransferase class-III VPUCM_RS06010 PF04055 Radical SAM superfamily VPUCM_RS06010 PF06968 Biotin and Thiamin Synthesis associated domain VPUCM_RS06015 PF00155 Aminotransferase class I and II VPUCM_RS06020 PF08241 Methyltransferase domain VPUCM_RS06030 PF01435 Peptidase family M48 VPUCM_RS06075 PF00206 Lyase VPUCM_RS06075 PF08328 Adenylosuccinate lyase C-terminal VPUCM_RS06080 PF04356 Protein of unknown function (DUF489) VPUCM_RS06095 PF00294 pfkB family carbohydrate kinase VPUCM_RS06100 PF00816 H-NS histone family VPUCM_RS06105 PF03553 Na+/H+ antiporter family VPUCM_RS06115 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS06115 PF00072 Response regulator receiver domain VPUCM_RS06115 PF00158 Sigma-54 interaction domain VPUCM_RS06120 PF08029 HisG, C-terminal domain VPUCM_RS06120 PF01634 ATP phosphoribosyltransferase VPUCM_RS06125 PF00815 Histidinol dehydrogenase VPUCM_RS06130 PF00155 Aminotransferase class I and II VPUCM_RS06135 PF00475 Imidazoleglycerol-phosphate dehydratase VPUCM_RS06135 PF08645 Polynucleotide kinase 3 phosphatase VPUCM_RS06140 PF00117 Glutamine amidotransferase class-I VPUCM_RS06145 PF00977 Histidine biosynthesis protein VPUCM_RS06150 PF00977 Histidine biosynthesis protein VPUCM_RS06155 PF01502 Phosphoribosyl-AMP cyclohydrolase VPUCM_RS06155 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VPUCM_RS06160 PF02810 SEC-C motif VPUCM_RS06165 PF08668 HDOD domain VPUCM_RS06165 PF00563 EAL domain VPUCM_RS06170 PF00149 Calcineurin-like phosphoesterase VPUCM_RS06175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VPUCM_RS06180 PF01406 tRNA synthetases class I (C) catalytic domain VPUCM_RS06180 PF09190 DALR domain VPUCM_RS06185 PF00265 Thymidine kinase VPUCM_RS06190 PF01797 Transposase IS200 like VPUCM_RS06210 PF00529 HlyD membrane-fusion protein of T1SS VPUCM_RS06210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VPUCM_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS06215 PF03466 LysR substrate binding domain VPUCM_RS06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS06235 PF00672 HAMP domain VPUCM_RS06235 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS06240 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS06240 PF00072 Response regulator receiver domain VPUCM_RS06245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS06245 PF00672 HAMP domain VPUCM_RS06250 PF04055 Radical SAM superfamily VPUCM_RS06250 PF11842 Domain of unknown function (DUF3362) VPUCM_RS06250 PF08497 Radical SAM N-terminal VPUCM_RS06255 PF00563 EAL domain VPUCM_RS06255 PF01590 GAF domain VPUCM_RS06255 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS06255 PF00360 Phytochrome region VPUCM_RS06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS06270 PF03466 LysR substrate binding domain VPUCM_RS06275 PF08267 Cobalamin-independent synthase, N-terminal domain VPUCM_RS06275 PF01717 Cobalamin-independent synthase, Catalytic domain VPUCM_RS06285 PF03795 YCII-related domain VPUCM_RS06290 PF03061 Thioesterase superfamily VPUCM_RS06295 PF04279 Intracellular septation protein A VPUCM_RS06305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS06305 PF00072 Response regulator receiver domain VPUCM_RS06310 PF17327 Acyl homoserine lactone synthase VPUCM_RS06315 PF00375 Sodium:dicarboxylate symporter family VPUCM_RS06320 PF13193 AMP-binding enzyme C-terminal domain VPUCM_RS06320 PF00501 AMP-binding enzyme VPUCM_RS06325 PF13545 Crp-like helix-turn-helix domain VPUCM_RS06325 PF00027 Cyclic nucleotide-binding domain VPUCM_RS06330 PF00290 Tryptophan synthase alpha chain VPUCM_RS06335 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_RS06340 PF00218 Indole-3-glycerol phosphate synthase VPUCM_RS06340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VPUCM_RS06345 PF02885 Glycosyl transferase family, helical bundle domain VPUCM_RS06345 PF00591 Glycosyl transferase family, a/b domain VPUCM_RS06350 PF00117 Glutamine amidotransferase class-I VPUCM_RS06355 PF00425 chorismate binding enzyme VPUCM_RS06355 PF04715 Anthranilate synthase component I, N terminal region VPUCM_RS06360 PF08056 Tryptophan operon leader peptide VPUCM_RS06365 PF02811 PHP domain VPUCM_RS06370 PF01300 Telomere recombination VPUCM_RS06380 PF01479 S4 domain VPUCM_RS06380 PF00849 RNA pseudouridylate synthase VPUCM_RS06385 PF04269 Protein of unknown function, DUF440 VPUCM_RS06390 PF09285 Elongation factor P, C-terminal VPUCM_RS06390 PF08207 Elongation factor P (EF-P) KOW-like domain VPUCM_RS06390 PF01132 Elongation factor P (EF-P) OB domain VPUCM_RS06400 PF00136 DNA polymerase family B VPUCM_RS06400 PF03104 DNA polymerase family B, exonuclease domain VPUCM_RS06405 PF00196 Bacterial regulatory proteins, luxR family VPUCM_RS06405 PF00072 Response regulator receiver domain VPUCM_RS06410 PF01541 GIY-YIG catalytic domain VPUCM_RS06410 PF02151 UvrB/uvrC motif VPUCM_RS06410 PF08459 UvrC Helix-hairpin-helix N-terminal VPUCM_RS06415 PF01066 CDP-alcohol phosphatidyltransferase VPUCM_RS06440 PF00202 Aminotransferase class-III VPUCM_RS06445 PF16653 Saccharopine dehydrogenase C-terminal domain VPUCM_RS06445 PF03435 Saccharopine dehydrogenase NADP binding domain VPUCM_RS06450 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VPUCM_RS06465 PF00994 Probable molybdopterin binding domain VPUCM_RS06475 PF00268 Ribonucleotide reductase, small chain VPUCM_RS06480 PF00317 Ribonucleotide reductase, all-alpha domain VPUCM_RS06480 PF03477 ATP cone domain VPUCM_RS06480 PF02867 Ribonucleotide reductase, barrel domain VPUCM_RS06490 PF00521 DNA gyrase/topoisomerase IV, subunit A VPUCM_RS06490 PF03989 DNA gyrase C-terminal domain, beta-propeller VPUCM_RS06505 PF02335 Cytochrome c552 VPUCM_RS06515 PF13247 4Fe-4S dicluster domain VPUCM_RS06520 PF03916 Polysulphide reductase, NrfD VPUCM_RS06525 PF01578 Cytochrome C assembly protein VPUCM_RS06525 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VPUCM_RS06530 PF08534 Redoxin VPUCM_RS06535 PF03918 Cytochrome C biogenesis protein VPUCM_RS06545 PF00925 GTP cyclohydrolase II VPUCM_RS06570 PF03734 L,D-transpeptidase catalytic domain VPUCM_RS06570 PF01471 Putative peptidoglycan binding domain VPUCM_RS06575 PF05951 Bacterial protein of unknown function (DUF882) VPUCM_RS06580 PF00753 Metallo-beta-lactamase superfamily VPUCM_RS06595 PF03480 Bacterial extracellular solute-binding protein, family 7 VPUCM_RS06605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VPUCM_RS06610 PF17200 Single Cache domain 2 VPUCM_RS06610 PF07730 Histidine kinase VPUCM_RS06615 PF00196 Bacterial regulatory proteins, luxR family VPUCM_RS06615 PF00072 Response regulator receiver domain VPUCM_RS06620 PF01047 MarR family VPUCM_RS06625 PF02028 BCCT, betaine/carnitine/choline family transporter VPUCM_RS06630 PF00672 HAMP domain VPUCM_RS06630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS06650 PF00155 Aminotransferase class I and II VPUCM_RS06665 PF00155 Aminotransferase class I and II VPUCM_RS06665 PF00392 Bacterial regulatory proteins, gntR family VPUCM_RS06675 PF01336 OB-fold nucleic acid binding domain VPUCM_RS06675 PF00152 tRNA synthetases class II (D, K and N) VPUCM_RS06680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS06680 PF00672 HAMP domain VPUCM_RS06680 PF02743 Cache domain VPUCM_RS06685 PF01242 6-pyruvoyl tetrahydropterin synthase VPUCM_RS06695 PF00563 EAL domain VPUCM_RS06695 PF04940 Sensors of blue-light using FAD VPUCM_RS06700 PF03313 Serine dehydratase alpha chain VPUCM_RS06700 PF03315 Serine dehydratase beta chain VPUCM_RS06705 PF03222 Tryptophan/tyrosine permease family VPUCM_RS06710 PF00293 NUDIX domain VPUCM_RS06720 PF09308 LuxQ, periplasmic VPUCM_RS06720 PF00072 Response regulator receiver domain VPUCM_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS06720 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS06725 PF00425 chorismate binding enzyme VPUCM_RS06725 PF04715 Anthranilate synthase component I, N terminal region VPUCM_RS06740 PF04317 YcjX-like family, DUF463 VPUCM_RS06745 PF05128 Domain of unknown function (DUF697) VPUCM_RS06750 PF00158 Sigma-54 interaction domain VPUCM_RS06750 PF18024 Helix-turn-helix domain VPUCM_RS06755 PF13302 Acetyltransferase (GNAT) domain VPUCM_RS06770 PF13495 Phage integrase, N-terminal SAM-like domain VPUCM_RS06770 PF00589 Phage integrase family VPUCM_RS06810 PF00857 Isochorismatase family VPUCM_RS06930 PF01810 LysE type translocator VPUCM_RS06945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_RS07005 PF12441 CopG antitoxin of type II toxin-antitoxin system VPUCM_RS07085 PF00583 Acetyltransferase (GNAT) family VPUCM_RS07125 PF01527 Transposase VPUCM_RS07130 PF13333 Integrase core domain VPUCM_RS07130 PF00665 Integrase core domain VPUCM_RS07130 PF13276 HTH-like domain VPUCM_RS07320 PF13737 Transposase DDE domain VPUCM_RS07360 PF13737 Transposase DDE domain VPUCM_RS07425 PF13737 Transposase DDE domain VPUCM_RS07480 PF01527 Transposase VPUCM_RS07515 PF00534 Glycosyl transferases group 1 VPUCM_RS07515 PF13439 Glycosyltransferase Family 4 VPUCM_RS07520 PF00534 Glycosyl transferases group 1 VPUCM_RS07520 PF13439 Glycosyltransferase Family 4 VPUCM_RS07525 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS07525 PF00072 Response regulator receiver domain VPUCM_RS07525 PF00158 Sigma-54 interaction domain VPUCM_RS07540 PF10531 SLBB domain VPUCM_RS07540 PF02563 Polysaccharide biosynthesis/export protein VPUCM_RS07550 PF01740 STAS domain VPUCM_RS07555 PF01068 ATP dependent DNA ligase domain VPUCM_RS07555 PF14743 DNA ligase OB-like domain VPUCM_RS07565 PF01554 MatE VPUCM_RS07570 PF00677 Lumazine binding domain VPUCM_RS07580 PF03881 Fructosamine kinase VPUCM_RS07585 PF01339 CheB methylesterase VPUCM_RS07585 PF00072 Response regulator receiver domain VPUCM_RS07590 PF05230 MASE2 domain VPUCM_RS07590 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS07600 PF00877 NlpC/P60 family VPUCM_RS07605 PF00672 HAMP domain VPUCM_RS07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS07605 PF12729 Four helix bundle sensory module for signal transduction VPUCM_RS07640 PF03942 DTW domain VPUCM_RS07645 PF00480 ROK family VPUCM_RS07660 PF00300 Histidine phosphatase superfamily (branch 1) VPUCM_RS07675 PF00939 Sodium:sulfate symporter transmembrane region VPUCM_RS07680 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS07680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS07680 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_RS07685 PF00158 Sigma-54 interaction domain VPUCM_RS07685 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS07685 PF00072 Response regulator receiver domain VPUCM_RS07690 PF03707 Bacterial signalling protein N terminal repeat VPUCM_RS07690 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS07690 PF00563 EAL domain VPUCM_RS07695 PF11871 Domain of unknown function (DUF3391) VPUCM_RS07695 PF01966 HD domain VPUCM_RS07700 PF01810 LysE type translocator VPUCM_RS07705 PF11230 Protein of unknown function (DUF3029) VPUCM_RS07710 PF04055 Radical SAM superfamily VPUCM_RS07720 PF03741 Integral membrane protein TerC family VPUCM_RS07730 PF01966 HD domain VPUCM_RS07735 PF00465 Iron-containing alcohol dehydrogenase VPUCM_RS07740 PF03222 Tryptophan/tyrosine permease family VPUCM_RS07760 PF00005 ABC transporter VPUCM_RS07760 PF00664 ABC transporter transmembrane region VPUCM_RS07765 PF00005 ABC transporter VPUCM_RS07765 PF00664 ABC transporter transmembrane region VPUCM_RS07790 PF00012 Hsp70 protein VPUCM_RS07795 PF00012 Hsp70 protein VPUCM_RS07805 PF17151 Periplasmic sensor domain VPUCM_RS07805 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS07835 PF01568 Molydopterin dinucleotide binding domain VPUCM_RS07835 PF00384 Molybdopterin oxidoreductase VPUCM_RS07835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VPUCM_RS07840 PF12800 4Fe-4S binding domain VPUCM_RS07840 PF13247 4Fe-4S dicluster domain VPUCM_RS07845 PF04976 DMSO reductase anchor subunit (DmsC) VPUCM_RS07850 PF02613 Nitrate reductase delta subunit VPUCM_RS07860 PF02525 Flavodoxin-like fold VPUCM_RS07865 PF11898 Domain of unknown function (DUF3418) VPUCM_RS07865 PF04408 Helicase associated domain (HA2) VPUCM_RS07865 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VPUCM_RS07865 PF00270 DEAD/DEAH box helicase VPUCM_RS07865 PF00271 Helicase conserved C-terminal domain VPUCM_RS07880 PF02028 BCCT, betaine/carnitine/choline family transporter VPUCM_RS07890 PF02397 Bacterial sugar transferase VPUCM_RS07895 PF00535 Glycosyl transferase family 2 VPUCM_RS07900 PF00534 Glycosyl transferases group 1 VPUCM_RS07900 PF13439 Glycosyltransferase Family 4 VPUCM_RS07910 PF03453 MoeA N-terminal region (domain I and II) VPUCM_RS07910 PF03454 MoeA C-terminal region (domain IV) VPUCM_RS07910 PF00994 Probable molybdopterin binding domain VPUCM_RS07915 PF12804 MobA-like NTP transferase domain VPUCM_RS07920 PF08402 TOBE domain VPUCM_RS07920 PF00005 ABC transporter VPUCM_RS07925 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS07930 PF12849 PBP superfamily domain VPUCM_RS07935 PF00158 Sigma-54 interaction domain VPUCM_RS07935 PF00072 Response regulator receiver domain VPUCM_RS07935 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS07940 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS07945 PF00005 ABC transporter VPUCM_RS07945 PF12848 ABC transporter VPUCM_RS07955 PF02634 FdhD/NarQ family VPUCM_RS07975 PF02613 Nitrate reductase delta subunit VPUCM_RS07985 PF01568 Molydopterin dinucleotide binding domain VPUCM_RS07985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VPUCM_RS07985 PF00384 Molybdopterin oxidoreductase VPUCM_RS07990 PF13247 4Fe-4S dicluster domain VPUCM_RS08005 PF05593 RHS Repeat VPUCM_RS08005 PF03527 RHS protein VPUCM_RS08075 PF00909 Ammonium Transporter Family VPUCM_RS08085 PF02146 Sir2 family VPUCM_RS08090 PF13416 Bacterial extracellular solute-binding protein VPUCM_RS08095 PF13416 Bacterial extracellular solute-binding protein VPUCM_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS08110 PF08402 TOBE domain VPUCM_RS08110 PF00005 ABC transporter VPUCM_RS08130 PF01171 PP-loop family VPUCM_RS08135 PF00582 Universal stress protein family VPUCM_RS08140 PF00027 Cyclic nucleotide-binding domain VPUCM_RS08140 PF13545 Crp-like helix-turn-helix domain VPUCM_RS08155 PF00403 Heavy-metal-associated domain VPUCM_RS08165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VPUCM_RS08165 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VPUCM_RS08180 PF00115 Cytochrome C and Quinol oxidase polypeptide I VPUCM_RS08195 PF00072 Response regulator receiver domain VPUCM_RS08195 PF09308 LuxQ, periplasmic VPUCM_RS08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS08195 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS08310 PF06303 MatP N-terminal domain VPUCM_RS08310 PF17414 MatP C-terminal ribbon-helix-helix domain VPUCM_RS08315 PF13654 AAA domain VPUCM_RS08315 PF05362 Lon protease (S16) C-terminal proteolytic domain VPUCM_RS08320 PF07977 FabA-like domain VPUCM_RS08325 PF04957 Ribosome modulation factor VPUCM_RS08335 PF00005 ABC transporter VPUCM_RS08335 PF16326 ABC transporter C-terminal domain VPUCM_RS08335 PF12848 ABC transporter VPUCM_RS08345 PF01170 Putative RNA methylase family UPF0020 VPUCM_RS08345 PF02926 THUMP domain VPUCM_RS08345 PF10672 S-adenosylmethionine-dependent methyltransferase VPUCM_RS08350 PF07126 Cell-division protein ZapC VPUCM_RS08355 PF01180 Dihydroorotate dehydrogenase VPUCM_RS08360 PF05088 Bacterial NAD-glutamate dehydrogenase VPUCM_RS08365 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VPUCM_RS08365 PF01433 Peptidase family M1 domain VPUCM_RS08365 PF11940 Domain of unknown function (DUF3458) Ig-like fold VPUCM_RS08375 PF03572 Peptidase family S41 VPUCM_RS08375 PF00595 PDZ domain VPUCM_RS08375 PF11818 C-terminal domain of tail specific protease (DUF3340) VPUCM_RS08375 PF17804 Tail specific protease N-terminal domain VPUCM_RS08380 PF04352 ProQ/FINO family VPUCM_RS08380 PF17516 ProQ C-terminal domain VPUCM_RS08385 PF13185 GAF domain VPUCM_RS08390 PF00005 ABC transporter VPUCM_RS08390 PF00664 ABC transporter transmembrane region VPUCM_RS08395 PF04403 Paraquat-inducible protein A VPUCM_RS08400 PF02470 MlaD protein VPUCM_RS08405 PF01189 16S rRNA methyltransferase RsmB/F VPUCM_RS08405 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VPUCM_RS08405 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VPUCM_RS08425 PF00793 DAHP synthetase I family VPUCM_RS08430 PF04461 Protein of unknown function (DUF520) VPUCM_RS08435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VPUCM_RS08435 PF14824 Sirohaem biosynthesis protein central VPUCM_RS08435 PF10414 Sirohaem synthase dimerisation region VPUCM_RS08440 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS08450 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS08455 PF00005 ABC transporter VPUCM_RS08460 PF01027 Inhibitor of apoptosis-promoting Bax1 VPUCM_RS08470 PF04358 DsrC like protein VPUCM_RS08475 PF00708 Acylphosphatase VPUCM_RS08480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS08480 PF00672 HAMP domain VPUCM_RS08480 PF02743 Cache domain VPUCM_RS08485 PF17785 PUA-like domain VPUCM_RS08485 PF10672 S-adenosylmethionine-dependent methyltransferase VPUCM_RS08505 PF05736 OprF membrane domain VPUCM_RS08505 PF00691 OmpA family VPUCM_RS08520 PF05736 OprF membrane domain VPUCM_RS08520 PF00691 OmpA family VPUCM_RS08530 PF17158 Membrane-associated sensor, integral membrane domain VPUCM_RS08530 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS08535 PF06508 Queuosine biosynthesis protein QueC VPUCM_RS08540 PF04055 Radical SAM superfamily VPUCM_RS08555 PF00089 Trypsin VPUCM_RS08560 PF00583 Acetyltransferase (GNAT) family VPUCM_RS08565 PF16177 Acetyl-coenzyme A synthetase N-terminus VPUCM_RS08565 PF13193 AMP-binding enzyme C-terminal domain VPUCM_RS08565 PF00501 AMP-binding enzyme VPUCM_RS08570 PF04303 PrpF protein VPUCM_RS08575 PF00694 Aconitase C-terminal domain VPUCM_RS08575 PF00330 Aconitase family (aconitate hydratase) VPUCM_RS08580 PF00285 Citrate synthase, C-terminal domain VPUCM_RS08610 PF01970 Tripartite tricarboxylate transporter TctA family VPUCM_RS08615 PF01925 Sulfite exporter TauE/SafE VPUCM_RS08625 PF05844 YopD protein VPUCM_RS08635 PF07720 Tetratricopeptide repeat VPUCM_RS08640 PF04792 V antigen (LcrV) protein VPUCM_RS08645 PF07216 LcrG protein VPUCM_RS08650 PF09621 Type III secretion system regulator (LcrR) VPUCM_RS08655 PF00771 FHIPEP family VPUCM_RS08675 PF09059 TyeA VPUCM_RS08680 PF07201 HrpJ-like domain VPUCM_RS08685 PF18269 T3SS EscN ATPase C-terminal domain VPUCM_RS08685 PF02874 ATP synthase alpha/beta family, beta-barrel domain VPUCM_RS08685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_RS08700 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VPUCM_RS08705 PF00813 FliP family VPUCM_RS08710 PF01313 Bacterial export proteins, family 3 VPUCM_RS08715 PF01311 Bacterial export proteins, family 1 VPUCM_RS08720 PF01312 FlhB HrpN YscU SpaS Family VPUCM_RS08725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS08725 PF03466 LysR substrate binding domain VPUCM_RS08730 PF12146 Serine aminopeptidase, S33 VPUCM_RS08735 PF12146 Serine aminopeptidase, S33 VPUCM_RS08765 PF02661 Fic/DOC family VPUCM_RS08775 PF02108 Flagellar assembly protein FliH VPUCM_RS08785 PF01514 Secretory protein of YscJ/FliF family VPUCM_RS08790 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI VPUCM_RS08800 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) VPUCM_RS08805 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF VPUCM_RS08815 PF16693 Inner membrane component of T3SS, periplasmic domain VPUCM_RS08815 PF16697 Inner membrane component of T3SS, cytoplasmic domain VPUCM_RS08820 PF03958 Bacterial type II/III secretion system short domain VPUCM_RS08820 PF00263 Bacterial type II and III secretion system protein VPUCM_RS08835 PF12833 Helix-turn-helix domain VPUCM_RS08855 PF00171 Aldehyde dehydrogenase family VPUCM_RS08860 PF00158 Sigma-54 interaction domain VPUCM_RS08860 PF01590 GAF domain VPUCM_RS08860 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS08875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VPUCM_RS08875 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VPUCM_RS08880 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VPUCM_RS08885 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VPUCM_RS08885 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VPUCM_RS08890 PF12431 Transcriptional regulator VPUCM_RS08890 PF00072 Response regulator receiver domain VPUCM_RS08895 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VPUCM_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS08895 PF17203 Single cache domain 3 VPUCM_RS08895 PF00989 PAS fold VPUCM_RS08910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VPUCM_RS08925 PF00034 Cytochrome c VPUCM_RS08925 PF03150 Di-haem cytochrome c peroxidase VPUCM_RS08940 PF13840 ACT domain VPUCM_RS08940 PF00696 Amino acid kinase family VPUCM_RS08945 PF06339 Ectoine synthase VPUCM_RS08950 PF00202 Aminotransferase class-III VPUCM_RS08955 PF00583 Acetyltransferase (GNAT) family VPUCM_RS08960 PF02028 BCCT, betaine/carnitine/choline family transporter VPUCM_RS08975 PF00571 CBS domain VPUCM_RS08975 PF00005 ABC transporter VPUCM_RS08980 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS08985 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VPUCM_RS08995 PF00501 AMP-binding enzyme VPUCM_RS09015 PF00072 Response regulator receiver domain VPUCM_RS09015 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS09020 PF08521 Two-component sensor kinase N-terminal VPUCM_RS09020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS09020 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS09025 PF00884 Sulfatase VPUCM_RS09050 PF01235 Sodium:alanine symporter family VPUCM_RS09060 PF01810 LysE type translocator VPUCM_RS09065 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VPUCM_RS09070 PF03279 Bacterial lipid A biosynthesis acyltransferase VPUCM_RS09080 PF13520 Amino acid permease VPUCM_RS09090 PF04204 Homoserine O-succinyltransferase VPUCM_RS09105 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS09105 PF00563 EAL domain VPUCM_RS09105 PF03707 Bacterial signalling protein N terminal repeat VPUCM_RS09110 PF01627 Hpt domain VPUCM_RS09110 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS09110 PF00672 HAMP domain VPUCM_RS09110 PF00072 Response regulator receiver domain VPUCM_RS09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS09110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VPUCM_RS09125 PF12464 Maltose acetyltransferase VPUCM_RS09125 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_RS09135 PF01928 CYTH domain VPUCM_RS09145 PF04237 YjbR VPUCM_RS09150 PF01047 MarR family VPUCM_RS09160 PF12833 Helix-turn-helix domain VPUCM_RS09165 PF01411 tRNA synthetases class II (A) VPUCM_RS09165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VPUCM_RS09165 PF02272 DHHA1 domain VPUCM_RS09180 PF00196 Bacterial regulatory proteins, luxR family VPUCM_RS09180 PF00563 EAL domain VPUCM_RS09185 PF02833 DHHA2 domain VPUCM_RS09185 PF01368 DHH family VPUCM_RS09190 PF00202 Aminotransferase class-III VPUCM_RS09195 PF00171 Aldehyde dehydrogenase family VPUCM_RS09200 PF04371 Porphyromonas-type peptidyl-arginine deiminase VPUCM_RS09205 PF00795 Carbon-nitrogen hydrolase VPUCM_RS09210 PF01266 FAD dependent oxidoreductase VPUCM_RS09215 PF00171 Aldehyde dehydrogenase family VPUCM_RS09220 PF07883 Cupin domain VPUCM_RS09220 PF01381 Helix-turn-helix VPUCM_RS09225 PF07722 Peptidase C26 VPUCM_RS09230 PF00120 Glutamine synthetase, catalytic domain VPUCM_RS09235 PF03553 Na+/H+ antiporter family VPUCM_RS09255 PF13302 Acetyltransferase (GNAT) domain VPUCM_RS09260 PF01810 LysE type translocator VPUCM_RS09300 PF14497 Glutathione S-transferase, C-terminal domain VPUCM_RS09300 PF02798 Glutathione S-transferase, N-terminal domain VPUCM_RS09310 PF04209 homogentisate 1,2-dioxygenase VPUCM_RS09315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_RS09325 PF01546 Peptidase family M20/M25/M40 VPUCM_RS09325 PF07687 Peptidase dimerisation domain VPUCM_RS09330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_RS09335 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS09340 PF12911 N-terminal TM domain of oligopeptide transport permease C VPUCM_RS09340 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS09345 PF00005 ABC transporter VPUCM_RS09345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS09350 PF00005 ABC transporter VPUCM_RS09350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS09360 PF01752 Collagenase VPUCM_RS09360 PF08453 Peptidase family M9 N-terminal VPUCM_RS09370 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS09375 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS09380 PF00005 ABC transporter VPUCM_RS09380 PF08402 TOBE domain VPUCM_RS09385 PF00701 Dihydrodipicolinate synthetase family VPUCM_RS09390 PF02423 Ornithine cyclodeaminase/mu-crystallin family VPUCM_RS09405 PF05544 Proline racemase VPUCM_RS09410 PF00171 Aldehyde dehydrogenase family VPUCM_RS09415 PF00392 Bacterial regulatory proteins, gntR family VPUCM_RS09435 PF05971 RNA methyltransferase VPUCM_RS09440 PF01863 Protein of unknown function DUF45 VPUCM_RS09450 PF03466 LysR substrate binding domain VPUCM_RS09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS09470 PF00005 ABC transporter VPUCM_RS09475 PF01032 FecCD transport family VPUCM_RS09480 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VPUCM_RS09490 PF00300 Histidine phosphatase superfamily (branch 1) VPUCM_RS09495 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VPUCM_RS09500 PF02654 Cobalamin-5-phosphate synthase VPUCM_RS09505 PF02277 Phosphoribosyltransferase VPUCM_RS09510 PF13460 NAD(P)H-binding VPUCM_RS09515 PF00375 Sodium:dicarboxylate symporter family VPUCM_RS09520 PF08411 Exonuclease C-terminal VPUCM_RS09520 PF00929 Exonuclease VPUCM_RS09525 PF03788 LrgA family VPUCM_RS09530 PF04172 LrgB-like family VPUCM_RS09535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VPUCM_RS09535 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VPUCM_RS09540 PF02222 ATP-grasp domain VPUCM_RS09545 PF05724 Thiopurine S-methyltransferase (TPMT) VPUCM_RS09555 PF00216 Bacterial DNA-binding protein VPUCM_RS09565 PF01588 Putative tRNA binding domain VPUCM_RS09565 PF03484 tRNA synthetase B5 domain VPUCM_RS09565 PF03147 Ferredoxin-fold anticodon binding domain VPUCM_RS09565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VPUCM_RS09565 PF03483 B3/4 domain VPUCM_RS09570 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VPUCM_RS09570 PF01409 tRNA synthetases class II core domain (F) VPUCM_RS09575 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS09575 PF17158 Membrane-associated sensor, integral membrane domain VPUCM_RS09605 PF01906 Putative heavy-metal-binding VPUCM_RS09610 PF00453 Ribosomal protein L20 VPUCM_RS09615 PF01632 Ribosomal protein L35 VPUCM_RS09620 PF00707 Translation initiation factor IF-3, C-terminal domain VPUCM_RS09620 PF05198 Translation initiation factor IF-3, N-terminal domain VPUCM_RS09625 PF02824 TGS domain VPUCM_RS09625 PF03129 Anticodon binding domain VPUCM_RS09625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VPUCM_RS09625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VPUCM_RS09640 PF00392 Bacterial regulatory proteins, gntR family VPUCM_RS09640 PF07702 UTRA domain VPUCM_RS09645 PF01979 Amidohydrolase family VPUCM_RS09650 PF00491 Arginase family VPUCM_RS09655 PF17391 Urocanase N-terminal domain VPUCM_RS09655 PF01175 Urocanase Rossmann-like domain VPUCM_RS09655 PF17392 Urocanase C-terminal domain VPUCM_RS09660 PF00221 Aromatic amino acid lyase VPUCM_RS09670 PF04191 Phospholipid methyltransferase VPUCM_RS09675 PF13183 4Fe-4S dicluster domain VPUCM_RS09675 PF01565 FAD binding domain VPUCM_RS09675 PF02913 FAD linked oxidases, C-terminal domain VPUCM_RS09690 PF00691 OmpA family VPUCM_RS09690 PF05736 OprF membrane domain VPUCM_RS09710 PF01259 SAICAR synthetase VPUCM_RS09715 PF09423 PhoD-like phosphatase VPUCM_RS09715 PF16655 PhoD-like phosphatase, N-terminal domain VPUCM_RS09725 PF02253 Phospholipase A1 VPUCM_RS09730 PF00270 DEAD/DEAH box helicase VPUCM_RS09730 PF08482 ATP-dependent helicase C-terminal VPUCM_RS09730 PF00271 Helicase conserved C-terminal domain VPUCM_RS09730 PF04408 Helicase associated domain (HA2) VPUCM_RS09735 PF00390 Malic enzyme, N-terminal domain VPUCM_RS09735 PF03949 Malic enzyme, NAD binding domain VPUCM_RS09740 PF02698 DUF218 domain VPUCM_RS09745 PF00939 Sodium:sulfate symporter transmembrane region VPUCM_RS09750 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS09750 PF00072 Response regulator receiver domain VPUCM_RS09760 PF00266 Aminotransferase class-V VPUCM_RS09770 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS09775 PF00664 ABC transporter transmembrane region VPUCM_RS09775 PF00005 ABC transporter VPUCM_RS09780 PF00005 ABC transporter VPUCM_RS09780 PF00664 ABC transporter transmembrane region VPUCM_RS09785 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_RS09790 PF00266 Aminotransferase class-V VPUCM_RS09800 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_RS09800 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS09815 PF04994 TfoX C-terminal domain VPUCM_RS09815 PF04993 TfoX N-terminal domain VPUCM_RS09830 PF03956 Lysine exporter LysO VPUCM_RS09840 PF00282 Pyridoxal-dependent decarboxylase conserved domain VPUCM_RS09845 PF01380 SIS domain VPUCM_RS09845 PF01418 Helix-turn-helix domain, rpiR family VPUCM_RS09850 PF00465 Iron-containing alcohol dehydrogenase VPUCM_RS09855 PF00462 Glutaredoxin VPUCM_RS09860 PF06826 Predicted Permease Membrane Region VPUCM_RS09860 PF02080 TrkA-C domain VPUCM_RS09865 PF12241 Trans-2-enoyl-CoA reductase catalytic region VPUCM_RS09865 PF07055 Enoyl reductase FAD binding domain VPUCM_RS09865 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VPUCM_RS09870 PF09317 Domain of unknown function (DUF1974) VPUCM_RS09870 PF02770 Acyl-CoA dehydrogenase, middle domain VPUCM_RS09870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_RS09870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_RS09875 PF16295 Tetracyclin repressor-like, C-terminal domain VPUCM_RS09875 PF00440 Bacterial regulatory proteins, tetR family VPUCM_RS09880 PF06965 Na+/H+ antiporter 1 VPUCM_RS09895 PF00005 ABC transporter VPUCM_RS09900 PF01554 MatE VPUCM_RS09905 PF11066 Protein of unknown function (DUF2867) VPUCM_RS09905 PF13460 NAD(P)H-binding VPUCM_RS09910 PF03264 NapC/NirT cytochrome c family, N-terminal region VPUCM_RS09925 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) VPUCM_RS09940 PF07690 Major Facilitator Superfamily VPUCM_RS09945 PF00849 RNA pseudouridylate synthase VPUCM_RS09945 PF01479 S4 domain VPUCM_RS09950 PF00271 Helicase conserved C-terminal domain VPUCM_RS09950 PF04851 Type III restriction enzyme, res subunit VPUCM_RS09960 PF00072 Response regulator receiver domain VPUCM_RS09960 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS09970 PF01386 Ribosomal L25p family VPUCM_RS09985 PF02872 5'-nucleotidase, C-terminal domain VPUCM_RS09985 PF00149 Calcineurin-like phosphoesterase VPUCM_RS09995 PF13276 HTH-like domain VPUCM_RS09995 PF13333 Integrase core domain VPUCM_RS09995 PF00665 Integrase core domain VPUCM_RS10000 PF01527 Transposase VPUCM_RS10005 PF06945 Protein of unknown function (DUF1289) VPUCM_RS10015 PF00196 Bacterial regulatory proteins, luxR family VPUCM_RS10015 PF00072 Response regulator receiver domain VPUCM_RS10020 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS10020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS10030 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VPUCM_RS10030 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS10040 PF09335 SNARE associated Golgi protein VPUCM_RS10045 PF13416 Bacterial extracellular solute-binding protein VPUCM_RS10050 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS10055 PF00005 ABC transporter VPUCM_RS10060 PF01066 CDP-alcohol phosphatidyltransferase VPUCM_RS10070 PF01590 GAF domain VPUCM_RS10070 PF00158 Sigma-54 interaction domain VPUCM_RS10075 PF03063 Prismane/CO dehydrogenase family VPUCM_RS10080 PF00970 Oxidoreductase FAD-binding domain VPUCM_RS10080 PF00175 Oxidoreductase NAD-binding domain VPUCM_RS10080 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_RS10090 PF00849 RNA pseudouridylate synthase VPUCM_RS10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS10095 PF00672 HAMP domain VPUCM_RS10095 PF12729 Four helix bundle sensory module for signal transduction VPUCM_RS10100 PF00209 Sodium:neurotransmitter symporter family VPUCM_RS10105 PF13091 PLD-like domain VPUCM_RS10105 PF13396 Phospholipase_D-nuclease N-terminal VPUCM_RS10110 PF01053 Cys/Met metabolism PLP-dependent enzyme VPUCM_RS10115 PF00561 alpha/beta hydrolase fold VPUCM_RS10120 PF03280 Proteobacterial lipase chaperone protein VPUCM_RS10125 PF03352 Methyladenine glycosylase VPUCM_RS10130 PF00873 AcrB/AcrD/AcrF family VPUCM_RS10135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VPUCM_RS10140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VPUCM_RS10145 PF04024 PspC domain VPUCM_RS10150 PF06667 Phage shock protein B VPUCM_RS10155 PF04012 PspA/IM30 family VPUCM_RS10160 PF00158 Sigma-54 interaction domain VPUCM_RS10160 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS10165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_RS10170 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS10175 PF12911 N-terminal TM domain of oligopeptide transport permease C VPUCM_RS10175 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS10180 PF00005 ABC transporter VPUCM_RS10180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS10185 PF00005 ABC transporter VPUCM_RS10195 PF01368 DHH family VPUCM_RS10195 PF02833 DHHA2 domain VPUCM_RS10210 PF01568 Molydopterin dinucleotide binding domain VPUCM_RS10210 PF18364 Molybdopterin oxidoreductase N-terminal domain VPUCM_RS10210 PF00384 Molybdopterin oxidoreductase VPUCM_RS10215 PF03264 NapC/NirT cytochrome c family, N-terminal region VPUCM_RS10220 PF06796 Periplasmic nitrate reductase protein NapE VPUCM_RS10225 PF03649 Uncharacterised protein family (UPF0014) VPUCM_RS10230 PF01226 Formate/nitrite transporter VPUCM_RS10255 PF02698 DUF218 domain VPUCM_RS10260 PF08267 Cobalamin-independent synthase, N-terminal domain VPUCM_RS10260 PF01717 Cobalamin-independent synthase, Catalytic domain VPUCM_RS10270 PF12833 Helix-turn-helix domain VPUCM_RS10270 PF02311 AraC-like ligand binding domain VPUCM_RS10275 PF00857 Isochorismatase family VPUCM_RS10280 PF00005 ABC transporter VPUCM_RS10280 PF12704 MacB-like periplasmic core domain VPUCM_RS10280 PF02687 FtsX-like permease family VPUCM_RS10285 PF12704 MacB-like periplasmic core domain VPUCM_RS10285 PF02687 FtsX-like permease family VPUCM_RS10285 PF00005 ABC transporter VPUCM_RS10290 PF12704 MacB-like periplasmic core domain VPUCM_RS10290 PF02687 FtsX-like permease family VPUCM_RS10290 PF00005 ABC transporter VPUCM_RS10300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VPUCM_RS10315 PF05958 tRNA (Uracil-5-)-methyltransferase VPUCM_RS10315 PF01938 TRAM domain VPUCM_RS10330 PF00085 Thioredoxin VPUCM_RS10335 PF11412 Disulphide bond corrector protein DsbC VPUCM_RS10335 PF02683 Cytochrome C biogenesis protein transmembrane region VPUCM_RS10345 PF03466 LysR substrate binding domain VPUCM_RS10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS10350 PF00196 Bacterial regulatory proteins, luxR family VPUCM_RS10350 PF00072 Response regulator receiver domain VPUCM_RS10355 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS10355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS10360 PF13247 4Fe-4S dicluster domain VPUCM_RS10365 PF03916 Polysulphide reductase, NrfD VPUCM_RS10370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VPUCM_RS10370 PF00384 Molybdopterin oxidoreductase VPUCM_RS10370 PF01568 Molydopterin dinucleotide binding domain VPUCM_RS10375 PF00034 Cytochrome c VPUCM_RS10380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VPUCM_RS10385 PF04403 Paraquat-inducible protein A VPUCM_RS10390 PF02470 MlaD protein VPUCM_RS10400 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase VPUCM_RS10410 PF00535 Glycosyl transferase family 2 VPUCM_RS10415 PF01370 NAD dependent epimerase/dehydratase family VPUCM_RS10425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_RS10430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VPUCM_RS10435 PF18073 Rubredoxin metal binding domain VPUCM_RS10440 PF06305 Lipopolysaccharide assembly protein A domain VPUCM_RS10445 PF00216 Bacterial DNA-binding protein VPUCM_RS10450 PF00575 S1 RNA binding domain VPUCM_RS10455 PF02224 Cytidylate kinase VPUCM_RS10460 PF01343 Peptidase family S49 VPUCM_RS10460 PF08496 Peptidase family S49 N-terminal VPUCM_RS10465 PF00106 short chain dehydrogenase VPUCM_RS10480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VPUCM_RS10480 PF02811 PHP domain VPUCM_RS10480 PF01336 OB-fold nucleic acid binding domain VPUCM_RS10480 PF07733 Bacterial DNA polymerase III alpha NTPase domain VPUCM_RS10480 PF14579 Helix-hairpin-helix motif VPUCM_RS10485 PF01584 CheW-like domain VPUCM_RS10485 PF00072 Response regulator receiver domain VPUCM_RS10490 PF00480 ROK family VPUCM_RS10495 PF00224 Pyruvate kinase, barrel domain VPUCM_RS10495 PF02887 Pyruvate kinase, alpha/beta domain VPUCM_RS10500 PF01734 Patatin-like phospholipase VPUCM_RS10515 PF00209 Sodium:neurotransmitter symporter family VPUCM_RS10525 PF00367 phosphotransferase system, EIIB VPUCM_RS10525 PF02378 Phosphotransferase system, EIIC VPUCM_RS10530 PF01026 TatD related DNase VPUCM_RS10535 PF09115 DNA polymerase III, delta subunit, C terminal VPUCM_RS10540 PF02223 Thymidylate kinase VPUCM_RS10545 PF02618 YceG-like family VPUCM_RS10550 PF01063 Amino-transferase class IV VPUCM_RS10555 PF02801 Beta-ketoacyl synthase, C-terminal domain VPUCM_RS10555 PF00109 Beta-ketoacyl synthase, N-terminal domain VPUCM_RS10560 PF00550 Phosphopantetheine attachment site VPUCM_RS10570 PF00698 Acyl transferase domain VPUCM_RS10575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VPUCM_RS10575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VPUCM_RS10580 PF02504 Fatty acid synthesis protein VPUCM_RS10585 PF01783 Ribosomal L32p protein family VPUCM_RS10590 PF02620 Large ribosomal RNA subunit accumulation protein YceD VPUCM_RS10595 PF02545 Maf-like protein VPUCM_RS10600 PF00849 RNA pseudouridylate synthase VPUCM_RS10600 PF01479 S4 domain VPUCM_RS10605 PF00575 S1 RNA binding domain VPUCM_RS10605 PF12111 Polyribonucleotide phosphorylase C terminal VPUCM_RS10605 PF10150 Ribonuclease E/G family VPUCM_RS10610 PF00916 Sulfate permease family VPUCM_RS10610 PF01740 STAS domain VPUCM_RS10615 PF01451 Low molecular weight phosphotyrosine protein phosphatase VPUCM_RS10620 PF12557 Cob(I)alamin adenosyltransferase N terminal VPUCM_RS10620 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VPUCM_RS10630 PF00485 Phosphoribulokinase / Uridine kinase family VPUCM_RS10635 PF10609 NUBPL iron-transfer P-loop NTPase VPUCM_RS10640 PF01588 Putative tRNA binding domain VPUCM_RS10640 PF09334 tRNA synthetases class I (M) VPUCM_RS10650 PF00392 Bacterial regulatory proteins, gntR family VPUCM_RS10650 PF07840 FadR C-terminal domain VPUCM_RS10655 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VPUCM_RS10660 PF02600 Disulfide bond formation protein DsbB VPUCM_RS10665 PF02810 SEC-C motif VPUCM_RS10665 PF03695 Uncharacterised protein family (UPF0149) VPUCM_RS10670 PF01207 Dihydrouridine synthase (Dus) VPUCM_RS10675 PF13174 Tetratricopeptide repeat VPUCM_RS10675 PF16331 TolA binding protein trimerisation VPUCM_RS10680 PF00691 OmpA family VPUCM_RS10685 PF04052 TolB amino-terminal domain VPUCM_RS10685 PF07676 WD40-like Beta Propeller Repeat VPUCM_RS10695 PF02472 Biopolymer transport protein ExbD/TolR VPUCM_RS10700 PF01618 MotA/TolQ/ExbB proton channel family VPUCM_RS10705 PF03061 Thioesterase superfamily VPUCM_RS10720 PF02322 Cytochrome bd terminal oxidase subunit II VPUCM_RS10725 PF01654 Cytochrome bd terminal oxidase subunit I VPUCM_RS10730 PF05491 RuvB C-terminal winged helix domain VPUCM_RS10730 PF17864 RuvB AAA lid domain VPUCM_RS10730 PF05496 Holliday junction DNA helicase RuvB P-loop domain VPUCM_RS10735 PF07499 RuvA, C-terminal domain VPUCM_RS10735 PF01330 RuvA N terminal domain VPUCM_RS10740 PF02203 Tar ligand binding domain homologue VPUCM_RS10740 PF00672 HAMP domain VPUCM_RS10740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS10745 PF02075 Crossover junction endodeoxyribonuclease RuvC VPUCM_RS10750 PF01336 OB-fold nucleic acid binding domain VPUCM_RS10750 PF00152 tRNA synthetases class II (D, K and N) VPUCM_RS10750 PF02938 GAD domain VPUCM_RS10755 PF01904 Protein of unknown function DUF72 VPUCM_RS10760 PF13649 Methyltransferase domain VPUCM_RS10765 PF08003 Protein of unknown function (DUF1698) VPUCM_RS10770 PF18030 RimK PreATP-grasp domain VPUCM_RS10770 PF08443 RimK-like ATP-grasp domain VPUCM_RS10780 PF18030 RimK PreATP-grasp domain VPUCM_RS10780 PF08443 RimK-like ATP-grasp domain VPUCM_RS10785 PF04310 MukB N-terminal VPUCM_RS10785 PF16330 MukB hinge domain VPUCM_RS10790 PF04288 MukE-like family VPUCM_RS10795 PF17192 MukF middle domain VPUCM_RS10795 PF03882 MukF winged-helix domain VPUCM_RS10795 PF17193 MukF C-terminal domain VPUCM_RS10800 PF13847 Methyltransferase domain VPUCM_RS10805 PF02698 DUF218 domain VPUCM_RS10810 PF00072 Response regulator receiver domain VPUCM_RS10810 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS10815 PF02613 Nitrate reductase delta subunit VPUCM_RS10820 PF00356 Bacterial regulatory proteins, lacI family VPUCM_RS10825 PF04994 TfoX C-terminal domain VPUCM_RS10825 PF04993 TfoX N-terminal domain VPUCM_RS10845 PF08323 Starch synthase catalytic domain VPUCM_RS10845 PF00534 Glycosyl transferases group 1 VPUCM_RS10850 PF00483 Nucleotidyl transferase VPUCM_RS10855 PF08272 Topoisomerase I zinc-ribbon-like VPUCM_RS10855 PF01396 Topoisomerase DNA binding C4 zinc finger VPUCM_RS10855 PF01131 DNA topoisomerase VPUCM_RS10855 PF01751 Toprim domain VPUCM_RS10860 PF10692 Protein of unknown function (DUF2498) VPUCM_RS10865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VPUCM_RS10875 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VPUCM_RS10880 PF04376 Arginine-tRNA-protein transferase, N terminus VPUCM_RS10880 PF04377 Arginine-tRNA-protein transferase, C terminus VPUCM_RS10885 PF01176 Translation initiation factor 1A / IF-1 VPUCM_RS10895 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_RS10895 PF02861 Clp amino terminal domain, pathogenicity island component VPUCM_RS10895 PF17871 AAA lid domain VPUCM_RS10895 PF07724 AAA domain (Cdc48 subfamily) VPUCM_RS10895 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS10900 PF02617 ATP-dependent Clp protease adaptor protein ClpS VPUCM_RS10905 PF00313 'Cold-shock' DNA-binding domain VPUCM_RS10910 PF03971 Monomeric isocitrate dehydrogenase VPUCM_RS10915 PF00849 RNA pseudouridylate synthase VPUCM_RS10920 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VPUCM_RS10930 PF13307 Helicase C-terminal domain VPUCM_RS10930 PF06733 DEAD_2 VPUCM_RS10935 PF01925 Sulfite exporter TauE/SafE VPUCM_RS10940 PF07445 Primosomal replication protein priC VPUCM_RS10945 PF10689 Protein of unknown function (DUF2496) VPUCM_RS10950 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_RS10955 PF02508 Rnf-Nqr subunit, membrane protein VPUCM_RS10960 PF04060 Putative Fe-S cluster VPUCM_RS10965 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VPUCM_RS10965 PF12838 4Fe-4S dicluster domain VPUCM_RS10965 PF13375 RnfC Barrel sandwich hybrid domain VPUCM_RS10965 PF10531 SLBB domain VPUCM_RS10970 PF03116 NQR2, RnfD, RnfE family VPUCM_RS10975 PF04205 FMN-binding domain VPUCM_RS10980 PF02508 Rnf-Nqr subunit, membrane protein VPUCM_RS10985 PF10576 Iron-sulfur binding domain of endonuclease III VPUCM_RS10985 PF00633 Helix-hairpin-helix motif VPUCM_RS10985 PF00730 HhH-GPD superfamily base excision DNA repair protein VPUCM_RS10990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_RS10995 PF10952 Protein of unknown function (DUF2753) VPUCM_RS11000 PF00691 OmpA family VPUCM_RS11000 PF18393 MotY N-terminal domain VPUCM_RS11005 PF00929 Exonuclease VPUCM_RS11010 PF03553 Na+/H+ antiporter family VPUCM_RS11010 PF13726 Na+-H+ antiporter family VPUCM_RS11020 PF00462 Glutaredoxin VPUCM_RS11025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VPUCM_RS11025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VPUCM_RS11040 PF00465 Iron-containing alcohol dehydrogenase VPUCM_RS11040 PF00171 Aldehyde dehydrogenase family VPUCM_RS11045 PF01914 MarC family integral membrane protein VPUCM_RS11050 PF00027 Cyclic nucleotide-binding domain VPUCM_RS11050 PF00520 Ion transport protein VPUCM_RS11055 PF01118 Semialdehyde dehydrogenase, NAD binding domain VPUCM_RS11055 PF02774 Semialdehyde dehydrogenase, dimerisation domain VPUCM_RS11060 PF03553 Na+/H+ antiporter family VPUCM_RS11075 PF04245 37-kD nucleoid-associated bacterial protein VPUCM_RS11080 PF07208 Protein of unknown function (DUF1414) VPUCM_RS11085 PF00884 Sulfatase VPUCM_RS11085 PF11893 Domain of unknown function (DUF3413) VPUCM_RS11095 PF00850 Histone deacetylase domain VPUCM_RS11100 PF00106 short chain dehydrogenase VPUCM_RS11110 PF01131 DNA topoisomerase VPUCM_RS11110 PF01751 Toprim domain VPUCM_RS11115 PF00881 Nitroreductase family VPUCM_RS11120 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS11120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VPUCM_RS11125 PF01343 Peptidase family S49 VPUCM_RS11130 PF17763 Glutaminase/Asparaginase C-terminal domain VPUCM_RS11130 PF00710 Asparaginase, N-terminal VPUCM_RS11135 PF07023 Protein of unknown function (DUF1315) VPUCM_RS11145 PF01641 SelR domain VPUCM_RS11150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPUCM_RS11150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VPUCM_RS11155 PF01263 Aldose 1-epimerase VPUCM_RS11160 PF02743 Cache domain VPUCM_RS11160 PF00672 HAMP domain VPUCM_RS11160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS11165 PF13847 Methyltransferase domain VPUCM_RS11180 PF00245 Alkaline phosphatase VPUCM_RS11190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_RS11195 PF03992 Antibiotic biosynthesis monooxygenase VPUCM_RS11200 PF05552 Conserved TM helix VPUCM_RS11200 PF00924 Mechanosensitive ion channel VPUCM_RS11205 PF03692 Putative zinc- or iron-chelating domain VPUCM_RS11210 PF04226 Transglycosylase associated protein VPUCM_RS11215 PF03692 Putative zinc- or iron-chelating domain VPUCM_RS11225 PF03313 Serine dehydratase alpha chain VPUCM_RS11230 PF01042 Endoribonuclease L-PSP VPUCM_RS11240 PF00230 Major intrinsic protein VPUCM_RS11245 PF02132 RecR protein VPUCM_RS11245 PF13662 Toprim domain VPUCM_RS11250 PF02575 YbaB/EbfC DNA-binding family VPUCM_RS11255 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VPUCM_RS11255 PF12170 DNA polymerase III tau subunit V interacting with alpha VPUCM_RS11255 PF12169 DNA polymerase III subunits gamma and tau domain III VPUCM_RS11260 PF00156 Phosphoribosyl transferase domain VPUCM_RS11265 PF04304 Protein of unknown function (DUF454) VPUCM_RS11275 PF00072 Response regulator receiver domain VPUCM_RS11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS11280 PF03466 LysR substrate binding domain VPUCM_RS11290 PF00156 Phosphoribosyl transferase domain VPUCM_RS11295 PF02674 Colicin V production protein VPUCM_RS11300 PF05036 Sporulation related domain VPUCM_RS11305 PF02875 Mur ligase family, glutamate ligase domain VPUCM_RS11305 PF08245 Mur ligase middle domain VPUCM_RS11310 PF01039 Carboxyl transferase domain VPUCM_RS11310 PF17848 Acetyl-coA carboxylase zinc finger domain VPUCM_RS11315 PF01416 tRNA pseudouridine synthase VPUCM_RS11325 PF02774 Semialdehyde dehydrogenase, dimerisation domain VPUCM_RS11325 PF01118 Semialdehyde dehydrogenase, NAD binding domain VPUCM_RS11330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_RS11330 PF11890 Domain of unknown function (DUF3410) VPUCM_RS11330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VPUCM_RS11335 PF00109 Beta-ketoacyl synthase, N-terminal domain VPUCM_RS11335 PF02801 Beta-ketoacyl synthase, C-terminal domain VPUCM_RS11340 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS11340 PF01266 FAD dependent oxidoreductase VPUCM_RS11345 PF03358 NADPH-dependent FMN reductase VPUCM_RS11350 PF08891 YfcL protein VPUCM_RS11355 PF04315 Elongation factor P hydroxylase VPUCM_RS11360 PF03458 UPF0126 domain VPUCM_RS11365 PF01264 Chorismate synthase VPUCM_RS11370 PF05175 Methyltransferase small domain VPUCM_RS11375 PF01713 Smr domain VPUCM_RS11380 PF00300 Histidine phosphatase superfamily (branch 1) VPUCM_RS11385 PF16187 Middle or third domain of peptidase_M16 VPUCM_RS11385 PF00675 Insulinase (Peptidase family M16) VPUCM_RS11385 PF05193 Peptidase M16 inactive domain VPUCM_RS11395 PF00378 Enoyl-CoA hydratase/isomerase VPUCM_RS11395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VPUCM_RS11395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VPUCM_RS11400 PF02803 Thiolase, C-terminal domain VPUCM_RS11400 PF00108 Thiolase, N-terminal domain VPUCM_RS11405 PF04542 Sigma-70 region 2 VPUCM_RS11405 PF08281 Sigma-70, region 4 VPUCM_RS11415 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_RS11420 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_RS11425 PF04333 MlaA lipoprotein VPUCM_RS11435 PF03918 Cytochrome C biogenesis protein VPUCM_RS11440 PF08534 Redoxin VPUCM_RS11445 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VPUCM_RS11445 PF01578 Cytochrome C assembly protein VPUCM_RS11450 PF03100 CcmE VPUCM_RS11455 PF04995 Heme exporter protein D (CcmD) VPUCM_RS11460 PF01578 Cytochrome C assembly protein VPUCM_RS11465 PF03379 CcmB protein VPUCM_RS11470 PF00005 ABC transporter VPUCM_RS11480 PF01584 CheW-like domain VPUCM_RS11490 PF13614 AAA domain VPUCM_RS11495 PF00072 Response regulator receiver domain VPUCM_RS11495 PF01339 CheB methylesterase VPUCM_RS11500 PF02895 Signal transducing histidine kinase, homodimeric domain VPUCM_RS11500 PF01627 Hpt domain VPUCM_RS11500 PF01584 CheW-like domain VPUCM_RS11500 PF00072 Response regulator receiver domain VPUCM_RS11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS11505 PF04344 Chemotaxis phosphatase, CheZ VPUCM_RS11510 PF00072 Response regulator receiver domain VPUCM_RS11515 PF04542 Sigma-70 region 2 VPUCM_RS11515 PF04539 Sigma-70 region 3 VPUCM_RS11515 PF04545 Sigma-70, region 4 VPUCM_RS11520 PF10609 NUBPL iron-transfer P-loop NTPase VPUCM_RS11525 PF00448 SRP54-type protein, GTPase domain VPUCM_RS11530 PF00771 FHIPEP family VPUCM_RS11535 PF01312 FlhB HrpN YscU SpaS Family VPUCM_RS11540 PF01311 Bacterial export proteins, family 1 VPUCM_RS11545 PF01313 Bacterial export proteins, family 3 VPUCM_RS11550 PF00813 FliP family VPUCM_RS11555 PF04347 Flagellar biosynthesis protein, FliO VPUCM_RS11560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VPUCM_RS11565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VPUCM_RS11565 PF02154 Flagellar motor switch protein FliM VPUCM_RS11585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_RS11585 PF18269 T3SS EscN ATPase C-terminal domain VPUCM_RS11595 PF01706 FliG C-terminal domain VPUCM_RS11595 PF14841 FliG middle domain VPUCM_RS11595 PF14842 FliG N-terminal domain VPUCM_RS11600 PF08345 Flagellar M-ring protein C-terminal VPUCM_RS11600 PF01514 Secretory protein of YscJ/FliF family VPUCM_RS11605 PF02049 Flagellar hook-basal body complex protein FliE VPUCM_RS11610 PF00072 Response regulator receiver domain VPUCM_RS11610 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS11610 PF00158 Sigma-54 interaction domain VPUCM_RS11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS11615 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS11615 PF13188 PAS domain VPUCM_RS11620 PF06490 Flagellar regulatory protein FleQ VPUCM_RS11620 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS11620 PF00158 Sigma-54 interaction domain VPUCM_RS11625 PF02561 Flagellar protein FliS VPUCM_RS11635 PF02465 Flagellar hook-associated protein 2 N-terminus VPUCM_RS11635 PF07195 Flagellar hook-associated protein 2 C-terminus VPUCM_RS11635 PF07196 Flagellin hook IN motif VPUCM_RS11640 PF03646 FlaG protein VPUCM_RS11645 PF00669 Bacterial flagellin N-terminal helical region VPUCM_RS11645 PF07196 Flagellin hook IN motif VPUCM_RS11645 PF00700 Bacterial flagellin C-terminal helical region VPUCM_RS11650 PF00669 Bacterial flagellin N-terminal helical region VPUCM_RS11650 PF07196 Flagellin hook IN motif VPUCM_RS11650 PF00700 Bacterial flagellin C-terminal helical region VPUCM_RS11655 PF07196 Flagellin hook IN motif VPUCM_RS11655 PF00669 Bacterial flagellin N-terminal helical region VPUCM_RS11655 PF00700 Bacterial flagellin C-terminal helical region VPUCM_RS11660 PF04261 Dyp-type peroxidase family VPUCM_RS11665 PF11143 Protein of unknown function (DUF2919) VPUCM_RS11685 PF03960 ArsC family VPUCM_RS11690 PF01546 Peptidase family M20/M25/M40 VPUCM_RS11690 PF07687 Peptidase dimerisation domain VPUCM_RS11705 PF06804 NlpB/DapX lipoprotein VPUCM_RS11710 PF00701 Dihydrodipicolinate synthetase family VPUCM_RS11715 PF01842 ACT domain VPUCM_RS11720 PF00578 AhpC/TSA family VPUCM_RS11725 PF01594 AI-2E family transporter VPUCM_RS11735 PF13181 Tetratricopeptide repeat VPUCM_RS11735 PF01435 Peptidase family M48 VPUCM_RS11740 PF03960 ArsC family VPUCM_RS11745 PF03358 NADPH-dependent FMN reductase VPUCM_RS11760 PF00860 Permease family VPUCM_RS11770 PF00586 AIR synthase related protein, N-terminal domain VPUCM_RS11770 PF02769 AIR synthase related protein, C-terminal domain VPUCM_RS11775 PF00551 Formyl transferase VPUCM_RS11780 PF02629 CoA binding domain VPUCM_RS11780 PF00549 CoA-ligase VPUCM_RS11785 PF08442 ATP-grasp domain VPUCM_RS11785 PF00549 CoA-ligase VPUCM_RS11790 PF00364 Biotin-requiring enzyme VPUCM_RS11790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VPUCM_RS11790 PF02817 e3 binding domain VPUCM_RS11795 PF16870 2-oxoglutarate dehydrogenase C-terminal VPUCM_RS11795 PF02779 Transketolase, pyrimidine binding domain VPUCM_RS11795 PF16078 2-oxoglutarate dehydrogenase N-terminus VPUCM_RS11795 PF00676 Dehydrogenase E1 component VPUCM_RS11800 PF13085 2Fe-2S iron-sulfur cluster binding domain VPUCM_RS11805 PF02910 Fumarate reductase flavoprotein C-term VPUCM_RS11805 PF00890 FAD binding domain VPUCM_RS11810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VPUCM_RS11815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VPUCM_RS11820 PF00285 Citrate synthase, C-terminal domain VPUCM_RS11825 PF01784 NIF3 (NGG1p interacting factor 3) VPUCM_RS11835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VPUCM_RS11835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VPUCM_RS11835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VPUCM_RS11835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VPUCM_RS11840 PF17206 SeqA protein N-terminal domain VPUCM_RS11840 PF03925 SeqA protein C-terminal domain VPUCM_RS11845 PF12697 Alpha/beta hydrolase family VPUCM_RS11855 PF00258 Flavodoxin VPUCM_RS11860 PF01118 Semialdehyde dehydrogenase, NAD binding domain VPUCM_RS11860 PF02774 Semialdehyde dehydrogenase, dimerisation domain VPUCM_RS11865 PF01475 Ferric uptake regulator family VPUCM_RS11870 PF00749 tRNA synthetases class I (E and Q), catalytic domain VPUCM_RS11870 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VPUCM_RS11875 PF00367 phosphotransferase system, EIIB VPUCM_RS11875 PF02378 Phosphotransferase system, EIIC VPUCM_RS11880 PF01979 Amidohydrolase family VPUCM_RS11885 PF01047 MarR family VPUCM_RS11885 PF00480 ROK family VPUCM_RS11890 PF00999 Sodium/hydrogen exchanger family VPUCM_RS11890 PF02254 TrkA-N domain VPUCM_RS11895 PF00733 Asparagine synthase VPUCM_RS11895 PF13537 Glutamine amidotransferase domain VPUCM_RS11900 PF02357 Transcription termination factor nusG VPUCM_RS11905 PF00854 POT family VPUCM_RS11910 PF00762 Ferrochelatase VPUCM_RS11915 PF05191 Adenylate kinase, active site lid VPUCM_RS11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS11920 PF00183 Hsp90 protein VPUCM_RS11925 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS11930 PF17323 Trans-membrane regulatory protein ToxS VPUCM_RS11945 PF12850 Calcineurin-like phosphoesterase superfamily domain VPUCM_RS11960 PF07556 Protein of unknown function (DUF1538) VPUCM_RS11965 PF07556 Protein of unknown function (DUF1538) VPUCM_RS11970 PF01370 NAD dependent epimerase/dehydratase family VPUCM_RS11970 PF08338 Domain of unknown function (DUF1731) VPUCM_RS11975 PF00106 short chain dehydrogenase VPUCM_RS11980 PF00085 Thioredoxin VPUCM_RS11985 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) VPUCM_RS11990 PF01270 Glycosyl hydrolases family 8 VPUCM_RS11995 PF03170 Bacterial cellulose synthase subunit VPUCM_RS12000 PF03552 Cellulose synthase VPUCM_RS12000 PF00535 Glycosyl transferase family 2 VPUCM_RS12000 PF07238 PilZ domain VPUCM_RS12005 PF06564 Cellulose biosynthesis protein BcsQ VPUCM_RS12015 PF10995 Cellulose biosynthesis GIL VPUCM_RS12020 PF11658 Cellulose biosynthesis protein BcsG VPUCM_RS12025 PF01145 SPFH domain / Band 7 family VPUCM_RS12025 PF16200 C-terminal region of band_7 VPUCM_RS12035 PF03573 outer membrane porin, OprD family VPUCM_RS12045 PF00533 BRCA1 C Terminus (BRCT) domain VPUCM_RS12045 PF12826 Helix-hairpin-helix motif VPUCM_RS12045 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VPUCM_RS12045 PF01653 NAD-dependent DNA ligase adenylation domain VPUCM_RS12045 PF03120 NAD-dependent DNA ligase OB-fold domain VPUCM_RS12050 PF04354 ZipA, C-terminal FtsZ-binding domain VPUCM_RS12060 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_RS12065 PF00381 PTS HPr component phosphorylation site VPUCM_RS12070 PF02896 PEP-utilising enzyme, TIM barrel domain VPUCM_RS12070 PF05524 PEP-utilising enzyme, N-terminal VPUCM_RS12070 PF00391 PEP-utilising enzyme, mobile domain VPUCM_RS12075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VPUCM_RS12080 PF00700 Bacterial flagellin C-terminal helical region VPUCM_RS12080 PF00669 Bacterial flagellin N-terminal helical region VPUCM_RS12080 PF07196 Flagellin hook IN motif VPUCM_RS12085 PF07196 Flagellin hook IN motif VPUCM_RS12085 PF00700 Bacterial flagellin C-terminal helical region VPUCM_RS12085 PF00669 Bacterial flagellin N-terminal helical region VPUCM_RS12090 PF00700 Bacterial flagellin C-terminal helical region VPUCM_RS12090 PF07196 Flagellin hook IN motif VPUCM_RS12090 PF00669 Bacterial flagellin N-terminal helical region VPUCM_RS12095 PF00669 Bacterial flagellin N-terminal helical region VPUCM_RS12100 PF07196 Flagellin hook IN motif VPUCM_RS12100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_RS12105 PF10135 Rod binding protein VPUCM_RS12105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VPUCM_RS12110 PF02119 Flagellar P-ring protein VPUCM_RS12115 PF02107 Flagellar L-ring protein VPUCM_RS12120 PF00460 Flagella basal body rod protein VPUCM_RS12120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_RS12125 PF00460 Flagella basal body rod protein VPUCM_RS12125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_RS12130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_RS12130 PF00460 Flagella basal body rod protein VPUCM_RS12130 PF07559 Flagellar basal body protein FlaE VPUCM_RS12135 PF03963 Flagellar hook capping protein - N-terminal region VPUCM_RS12135 PF13860 FlgD Ig-like domain VPUCM_RS12135 PF13861 FlgD Tudor-like domain VPUCM_RS12140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_RS12140 PF00460 Flagella basal body rod protein VPUCM_RS12145 PF00460 Flagella basal body rod protein VPUCM_RS12150 PF01739 CheR methyltransferase, SAM binding domain VPUCM_RS12150 PF03705 CheR methyltransferase, all-alpha domain VPUCM_RS12155 PF01584 CheW-like domain VPUCM_RS12155 PF00072 Response regulator receiver domain VPUCM_RS12200 PF01389 OmpA-like transmembrane domain VPUCM_RS12200 PF00691 OmpA family VPUCM_RS12205 PF00749 tRNA synthetases class I (E and Q), catalytic domain VPUCM_RS12210 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VPUCM_RS12215 PF13609 Gram-negative porin VPUCM_RS12220 PF00403 Heavy-metal-associated domain VPUCM_RS12235 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VPUCM_RS12235 PF00728 Glycosyl hydrolase family 20, catalytic domain VPUCM_RS12235 PF02838 Glycosyl hydrolase family 20, domain 2 VPUCM_RS12235 PF03173 Putative carbohydrate binding domain VPUCM_RS12255 PF01713 Smr domain VPUCM_RS12260 PF00849 RNA pseudouridylate synthase VPUCM_RS12260 PF01479 S4 domain VPUCM_RS12265 PF04073 Aminoacyl-tRNA editing domain VPUCM_RS12270 PF00149 Calcineurin-like phosphoesterase VPUCM_RS12270 PF02872 5'-nucleotidase, C-terminal domain VPUCM_RS12275 PF00793 DAHP synthetase I family VPUCM_RS12280 PF13369 Transglutaminase-like superfamily VPUCM_RS12285 PF04247 Invasion gene expression up-regulator, SirB VPUCM_RS12290 PF13847 Methyltransferase domain VPUCM_RS12290 PF17827 PrmC N-terminal domain VPUCM_RS12295 PF00472 RF-1 domain VPUCM_RS12295 PF03462 PCRF domain VPUCM_RS12300 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VPUCM_RS12300 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VPUCM_RS12300 PF01488 Shikimate / quinate 5-dehydrogenase VPUCM_RS12305 PF03550 Outer membrane lipoprotein LolB VPUCM_RS12310 PF00288 GHMP kinases N terminal domain VPUCM_RS12310 PF08544 GHMP kinases C terminal VPUCM_RS12315 PF14572 Phosphoribosyl synthetase-associated domain VPUCM_RS12315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VPUCM_RS12320 PF01195 Peptidyl-tRNA hydrolase VPUCM_RS12325 PF01926 50S ribosome-binding GTPase VPUCM_RS12325 PF06071 Protein of unknown function (DUF933) VPUCM_RS12440 PF01494 FAD binding domain VPUCM_RS12445 PF04055 Radical SAM superfamily VPUCM_RS12445 PF01938 TRAM domain VPUCM_RS12445 PF00919 Uncharacterized protein family UPF0004 VPUCM_RS12450 PF02562 PhoH-like protein VPUCM_RS12455 PF02130 Uncharacterized protein family UPF0054 VPUCM_RS12460 PF03471 Transporter associated domain VPUCM_RS12460 PF00571 CBS domain VPUCM_RS12465 PF00795 Carbon-nitrogen hydrolase VPUCM_RS12470 PF07295 Zinc-ribbon containing domain VPUCM_RS12475 PF08264 Anticodon-binding domain of tRNA VPUCM_RS12475 PF00133 tRNA synthetases class I (I, L, M and V) VPUCM_RS12475 PF13603 Leucyl-tRNA synthetase, Domain 2 VPUCM_RS12480 PF04390 Lipopolysaccharide-assembly VPUCM_RS12485 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VPUCM_RS12485 PF06144 DNA polymerase III, delta subunit VPUCM_RS12495 PF02590 Predicted SPOUT methyltransferase VPUCM_RS12500 PF03717 Penicillin-binding Protein dimerisation domain VPUCM_RS12500 PF00905 Penicillin binding protein transpeptidase domain VPUCM_RS12505 PF01098 Cell cycle protein VPUCM_RS12510 PF03330 Lytic transglycolase VPUCM_RS12510 PF05036 Sporulation related domain VPUCM_RS12515 PF07943 Penicillin-binding protein 5, C-terminal domain VPUCM_RS12515 PF00768 D-alanyl-D-alanine carboxypeptidase VPUCM_RS12520 PF04359 Protein of unknown function (DUF493) VPUCM_RS12525 PF03099 Biotin/lipoate A/B protein ligase family VPUCM_RS12530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VPUCM_RS12530 PF04055 Radical SAM superfamily VPUCM_RS12535 PF00464 Serine hydroxymethyltransferase VPUCM_RS12540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VPUCM_RS12540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VPUCM_RS12555 PF00128 Alpha amylase, catalytic domain VPUCM_RS12555 PF16657 Maltogenic Amylase, C-terminal domain VPUCM_RS12560 PF02378 Phosphotransferase system, EIIC VPUCM_RS12560 PF00367 phosphotransferase system, EIIB VPUCM_RS12565 PF00356 Bacterial regulatory proteins, lacI family VPUCM_RS12575 PF09383 NIL domain VPUCM_RS12575 PF00005 ABC transporter VPUCM_RS12580 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS12585 PF03180 NLPA lipoprotein VPUCM_RS12590 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VPUCM_RS12595 PF07348 Syd protein (SUKH-2) VPUCM_RS12600 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VPUCM_RS12600 PF14489 QueF-like protein VPUCM_RS12610 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS12615 PF11892 Domain of unknown function (DUF3412) VPUCM_RS12615 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VPUCM_RS12615 PF03641 Possible lysine decarboxylase VPUCM_RS12620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VPUCM_RS12620 PF01367 5'-3' exonuclease, C-terminal SAM fold VPUCM_RS12625 PF01223 DNA/RNA non-specific endonuclease VPUCM_RS12630 PF18125 RlmM ferredoxin-like domain VPUCM_RS12630 PF01728 FtsJ-like methyltransferase VPUCM_RS12635 PF04241 Protein of unknown function (DUF423) VPUCM_RS12645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS12645 PF03466 LysR substrate binding domain VPUCM_RS12650 PF02568 Thiamine biosynthesis protein (ThiI) VPUCM_RS12650 PF02926 THUMP domain VPUCM_RS12655 PF00691 OmpA family VPUCM_RS12660 PF01618 MotA/TolQ/ExbB proton channel family VPUCM_RS12665 PF02609 Exonuclease VII small subunit VPUCM_RS12670 PF00348 Polyprenyl synthetase VPUCM_RS12675 PF02779 Transketolase, pyrimidine binding domain VPUCM_RS12675 PF02780 Transketolase, C-terminal domain VPUCM_RS12675 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VPUCM_RS12680 PF04608 Phosphatidylglycerophosphatase A VPUCM_RS12685 PF00586 AIR synthase related protein, N-terminal domain VPUCM_RS12685 PF02769 AIR synthase related protein, C-terminal domain VPUCM_RS12690 PF01029 NusB family VPUCM_RS12695 PF00885 6,7-dimethyl-8-ribityllumazine synthase VPUCM_RS12700 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VPUCM_RS12700 PF00925 GTP cyclohydrolase II VPUCM_RS12705 PF00677 Lumazine binding domain VPUCM_RS12710 PF01872 RibD C-terminal domain VPUCM_RS12710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VPUCM_RS12715 PF03477 ATP cone domain VPUCM_RS12720 PF00171 Aldehyde dehydrogenase family VPUCM_RS12725 PF00696 Amino acid kinase family VPUCM_RS12725 PF01472 PUA domain VPUCM_RS12730 PF07417 Sigma factor-binding transcriptional regulator Crl VPUCM_RS12735 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VPUCM_RS12740 PF00156 Phosphoribosyl transferase domain VPUCM_RS12745 PF00860 Permease family VPUCM_RS12750 PF01546 Peptidase family M20/M25/M40 VPUCM_RS12750 PF07687 Peptidase dimerisation domain VPUCM_RS12775 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VPUCM_RS12775 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VPUCM_RS12775 PF02769 AIR synthase related protein, C-terminal domain VPUCM_RS12780 PF01464 Transglycosylase SLT domain VPUCM_RS12780 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_RS12785 PF00579 tRNA synthetases class I (W and Y) VPUCM_RS12790 PF08525 Opacity-associated protein A N-terminal motif VPUCM_RS12790 PF01551 Peptidase family M23 VPUCM_RS12790 PF01476 LysM domain VPUCM_RS12795 PF00873 AcrB/AcrD/AcrF family VPUCM_RS12805 PF01521 Iron-sulphur cluster biosynthesis VPUCM_RS12810 PF00202 Aminotransferase class-III VPUCM_RS12815 PF01594 AI-2E family transporter VPUCM_RS12820 PF08468 Methyltransferase small domain N-terminal VPUCM_RS12820 PF05175 Methyltransferase small domain VPUCM_RS12825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS12825 PF00072 Response regulator receiver domain VPUCM_RS12825 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS12825 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_RS12830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_RS12835 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS12840 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS12840 PF12911 N-terminal TM domain of oligopeptide transport permease C VPUCM_RS12845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS12845 PF00005 ABC transporter VPUCM_RS12850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_RS12850 PF00005 ABC transporter VPUCM_RS12860 PF01869 BadF/BadG/BcrA/BcrD ATPase family VPUCM_RS12865 PF02838 Glycosyl hydrolase family 20, domain 2 VPUCM_RS12865 PF00728 Glycosyl hydrolase family 20, catalytic domain VPUCM_RS12870 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VPUCM_RS12870 PF06165 Glycosyltransferase family 36 VPUCM_RS12875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VPUCM_RS12875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VPUCM_RS12875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VPUCM_RS12875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VPUCM_RS12880 PF08402 TOBE domain VPUCM_RS12880 PF00005 ABC transporter VPUCM_RS12890 PF13416 Bacterial extracellular solute-binding protein VPUCM_RS12895 PF00909 Ammonium Transporter Family VPUCM_RS12900 PF00543 Nitrogen regulatory protein P-II VPUCM_RS12905 PF06062 Uncharacterised protein family (UPF0231) VPUCM_RS12910 PF11791 Aconitate B N-terminal domain VPUCM_RS12910 PF06434 Aconitate hydratase 2 N-terminus VPUCM_RS12910 PF00330 Aconitase family (aconitate hydratase) VPUCM_RS12915 PF01734 Patatin-like phospholipase VPUCM_RS12920 PF00905 Penicillin binding protein transpeptidase domain VPUCM_RS12920 PF14814 Bifunctional transglycosylase second domain VPUCM_RS12920 PF00912 Transglycosylase VPUCM_RS12925 PF08482 ATP-dependent helicase C-terminal VPUCM_RS12925 PF00271 Helicase conserved C-terminal domain VPUCM_RS12925 PF04408 Helicase associated domain (HA2) VPUCM_RS12925 PF00270 DEAD/DEAH box helicase VPUCM_RS12930 PF17746 SfsA N-terminal OB domain VPUCM_RS12930 PF03749 Sugar fermentation stimulation protein RE domain VPUCM_RS12935 PF01258 Prokaryotic dksA/traR C4-type zinc finger VPUCM_RS12940 PF00749 tRNA synthetases class I (E and Q), catalytic domain VPUCM_RS12945 PF01743 Poly A polymerase head domain VPUCM_RS12945 PF12626 Polymerase A arginine-rich C-terminus VPUCM_RS12945 PF12627 Probable RNA and SrmB- binding site of polymerase A VPUCM_RS12950 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VPUCM_RS12955 PF02548 Ketopantoate hydroxymethyltransferase VPUCM_RS12960 PF02569 Pantoate-beta-alanine ligase VPUCM_RS12965 PF03279 Bacterial lipid A biosynthesis acyltransferase VPUCM_RS12970 PF01061 ABC-2 type transporter VPUCM_RS12975 PF00005 ABC transporter VPUCM_RS12980 PF01740 STAS domain VPUCM_RS12980 PF00916 Sulfate permease family VPUCM_RS12985 PF00484 Carbonic anhydrase VPUCM_RS12990 PF00156 Phosphoribosyl transferase domain VPUCM_RS12995 PF00440 Bacterial regulatory proteins, tetR family VPUCM_RS13000 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS13000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VPUCM_RS13005 PF02817 e3 binding domain VPUCM_RS13005 PF00364 Biotin-requiring enzyme VPUCM_RS13005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VPUCM_RS13010 PF00456 Transketolase, thiamine diphosphate binding domain VPUCM_RS13010 PF17831 Pyruvate dehydrogenase E1 component middle domain VPUCM_RS13015 PF00392 Bacterial regulatory proteins, gntR family VPUCM_RS13015 PF07729 FCD domain VPUCM_RS13020 PF01510 N-acetylmuramoyl-L-alanine amidase VPUCM_RS13025 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VPUCM_RS13025 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VPUCM_RS13030 PF07963 Prokaryotic N-terminal methylation motif VPUCM_RS13030 PF00114 Pilin (bacterial filament) VPUCM_RS13035 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VPUCM_RS13035 PF00437 Type II/IV secretion system protein VPUCM_RS13040 PF00482 Type II secretion system (T2SS), protein F VPUCM_RS13045 PF06750 Bacterial Peptidase A24 N-terminal domain VPUCM_RS13045 PF01478 Type IV leader peptidase family VPUCM_RS13050 PF01121 Dephospho-CoA kinase VPUCM_RS13055 PF07072 Cell division protein VPUCM_RS13060 PF03884 DNA gyrase inhibitor YacG VPUCM_RS13065 PF01245 Ribosomal protein L19 VPUCM_RS13070 PF01746 tRNA (Guanine-1)-methyltransferase VPUCM_RS13075 PF05239 PRC-barrel domain VPUCM_RS13075 PF01782 RimM N-terminal domain VPUCM_RS13080 PF00886 Ribosomal protein S16 VPUCM_RS13085 PF02881 SRP54-type protein, helical bundle domain VPUCM_RS13085 PF00448 SRP54-type protein, GTPase domain VPUCM_RS13085 PF02978 Signal peptide binding domain VPUCM_RS13090 PF01578 Cytochrome C assembly protein VPUCM_RS13095 PF01595 Cyclin M transmembrane N-terminal domain VPUCM_RS13095 PF00571 CBS domain VPUCM_RS13095 PF03471 Transporter associated domain VPUCM_RS13100 PF02664 S-Ribosylhomocysteinase (LuxS) VPUCM_RS13110 PF04262 Glutamate-cysteine ligase VPUCM_RS13115 PF00675 Insulinase (Peptidase family M16) VPUCM_RS13115 PF05193 Peptidase M16 inactive domain VPUCM_RS13120 PF09335 SNARE associated Golgi protein VPUCM_RS13125 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_RS13125 PF00107 Zinc-binding dehydrogenase VPUCM_RS13130 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VPUCM_RS13135 PF00364 Biotin-requiring enzyme VPUCM_RS13135 PF00682 HMGL-like VPUCM_RS13135 PF02436 Conserved carboxylase domain VPUCM_RS13140 PF04277 Oxaloacetate decarboxylase, gamma chain VPUCM_RS13195 PF02599 Global regulator protein family VPUCM_RS13200 PF13840 ACT domain VPUCM_RS13200 PF00696 Amino acid kinase family VPUCM_RS13200 PF01842 ACT domain VPUCM_RS13205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VPUCM_RS13205 PF01411 tRNA synthetases class II (A) VPUCM_RS13205 PF02272 DHHA1 domain VPUCM_RS13210 PF02631 RecX family VPUCM_RS13215 PF00154 recA bacterial DNA recombination protein VPUCM_RS13220 PF02464 Competence-damaged protein VPUCM_RS13225 PF01624 MutS domain I VPUCM_RS13225 PF05188 MutS domain II VPUCM_RS13225 PF05192 MutS domain III VPUCM_RS13225 PF05190 MutS family domain IV VPUCM_RS13225 PF00488 MutS domain V VPUCM_RS13230 PF04542 Sigma-70 region 2 VPUCM_RS13230 PF00140 Sigma-70 factor, region 1.2 VPUCM_RS13230 PF04539 Sigma-70 region 3 VPUCM_RS13230 PF04545 Sigma-70, region 4 VPUCM_RS13235 PF01551 Peptidase family M23 VPUCM_RS13235 PF01476 LysM domain VPUCM_RS13245 PF01975 Survival protein SurE VPUCM_RS13250 PF01142 tRNA pseudouridine synthase D (TruD) VPUCM_RS13255 PF02542 YgbB family VPUCM_RS13260 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VPUCM_RS13265 PF04977 Septum formation initiator VPUCM_RS13270 PF03952 Enolase, N-terminal domain VPUCM_RS13270 PF00113 Enolase, C-terminal TIM barrel domain VPUCM_RS13275 PF06418 CTP synthase N-terminus VPUCM_RS13275 PF00117 Glutamine amidotransferase class-I VPUCM_RS13280 PF03819 MazG nucleotide pyrophosphohydrolase domain VPUCM_RS13285 PF13291 ACT domain VPUCM_RS13285 PF02824 TGS domain VPUCM_RS13285 PF04607 Region found in RelA / SpoT proteins VPUCM_RS13290 PF01938 TRAM domain VPUCM_RS13290 PF05958 tRNA (Uracil-5-)-methyltransferase VPUCM_RS13295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VPUCM_RS13295 PF00072 Response regulator receiver domain VPUCM_RS13295 PF01627 Hpt domain VPUCM_RS13295 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS13295 PF00672 HAMP domain VPUCM_RS13300 PF01648 4'-phosphopantetheinyl transferase superfamily VPUCM_RS13305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VPUCM_RS13310 PF02565 Recombination protein O C terminal VPUCM_RS13310 PF11967 Recombination protein O N terminal VPUCM_RS13315 PF07650 KH domain VPUCM_RS13315 PF01926 50S ribosome-binding GTPase VPUCM_RS13320 PF14622 Ribonuclease-III-like VPUCM_RS13320 PF00035 Double-stranded RNA binding motif VPUCM_RS13325 PF10502 Signal peptidase, peptidase S26 VPUCM_RS13330 PF00679 Elongation factor G C-terminus VPUCM_RS13330 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS13330 PF06421 GTP-binding protein LepA C-terminus VPUCM_RS13330 PF03144 Elongation factor Tu domain 2 VPUCM_RS13340 PF17188 MucB/RseB C-terminal domain VPUCM_RS13340 PF03888 MucB/RseB N-terminal domain VPUCM_RS13345 PF03872 Anti sigma-E protein RseA, N-terminal domain VPUCM_RS13345 PF03873 Anti sigma-E protein RseA, C-terminal domain VPUCM_RS13350 PF04542 Sigma-70 region 2 VPUCM_RS13350 PF08281 Sigma-70, region 4 VPUCM_RS13355 PF02910 Fumarate reductase flavoprotein C-term VPUCM_RS13355 PF00890 FAD binding domain VPUCM_RS13360 PF03937 Flavinator of succinate dehydrogenase VPUCM_RS13365 PF01571 Aminomethyltransferase folate-binding domain VPUCM_RS13380 PF01494 FAD binding domain VPUCM_RS13385 PF01494 FAD binding domain VPUCM_RS13390 PF03695 Uncharacterised protein family (UPF0149) VPUCM_RS13395 PF05164 Cell division protein ZapA VPUCM_RS13400 PF01812 5-formyltetrahydrofolate cyclo-ligase family VPUCM_RS13405 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VPUCM_RS13410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_RS13410 PF01842 ACT domain VPUCM_RS13410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VPUCM_RS13415 PF04402 Protein of unknown function (DUF541) VPUCM_RS13420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS13420 PF03466 LysR substrate binding domain VPUCM_RS13425 PF01810 LysE type translocator VPUCM_RS13430 PF04073 Aminoacyl-tRNA editing domain VPUCM_RS13435 PF05552 Conserved TM helix VPUCM_RS13435 PF00924 Mechanosensitive ion channel VPUCM_RS13440 PF01116 Fructose-bisphosphate aldolase class-II VPUCM_RS13445 PF00162 Phosphoglycerate kinase VPUCM_RS13450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VPUCM_RS13450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPUCM_RS13455 PF07715 TonB-dependent Receptor Plug Domain VPUCM_RS13455 PF00593 TonB dependent receptor VPUCM_RS13460 PF03466 LysR substrate binding domain VPUCM_RS13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS13465 PF02779 Transketolase, pyrimidine binding domain VPUCM_RS13465 PF00456 Transketolase, thiamine diphosphate binding domain VPUCM_RS13465 PF02780 Transketolase, C-terminal domain VPUCM_RS13475 PF02773 S-adenosylmethionine synthetase, C-terminal domain VPUCM_RS13475 PF02772 S-adenosylmethionine synthetase, central domain VPUCM_RS13475 PF00438 S-adenosylmethionine synthetase, N-terminal domain VPUCM_RS13485 PF10263 SprT-like family VPUCM_RS13485 PF17283 SprT-like zinc ribbon domain VPUCM_RS13490 PF04231 Endonuclease I VPUCM_RS13495 PF04452 RNA methyltransferase VPUCM_RS13500 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VPUCM_RS13500 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VPUCM_RS13505 PF02622 Uncharacterized ACR, COG1678 VPUCM_RS13510 PF03652 Holliday junction resolvase VPUCM_RS13515 PF00437 Type II/IV secretion system protein VPUCM_RS13520 PF00437 Type II/IV secretion system protein VPUCM_RS13525 PF01168 Alanine racemase, N-terminal domain VPUCM_RS13530 PF03807 NADP oxidoreductase coenzyme F420-dependent VPUCM_RS13530 PF14748 Pyrroline-5-carboxylate reductase dimerisation VPUCM_RS13535 PF02325 YGGT family VPUCM_RS13540 PF02594 Uncharacterised ACR, YggU family COG1872 VPUCM_RS13550 PF01725 Ham1 family VPUCM_RS13555 PF06969 HemN C-terminal domain VPUCM_RS13555 PF04055 Radical SAM superfamily VPUCM_RS13560 PF04960 Glutaminase VPUCM_RS13565 PF02086 D12 class N6 adenine-specific DNA methyltransferase VPUCM_RS13570 PF02390 Putative methyltransferase VPUCM_RS13575 PF14815 NUDIX domain VPUCM_RS13575 PF00633 Helix-hairpin-helix motif VPUCM_RS13575 PF00730 HhH-GPD superfamily base excision DNA repair protein VPUCM_RS13580 PF04362 Bacterial Fe(2+) trafficking VPUCM_RS13585 PF01464 Transglycosylase SLT domain VPUCM_RS13585 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VPUCM_RS13625 PF17200 Single Cache domain 2 VPUCM_RS13625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS13625 PF00672 HAMP domain VPUCM_RS13655 PF00171 Aldehyde dehydrogenase family VPUCM_RS13700 PF00072 Response regulator receiver domain VPUCM_RS13705 PF00356 Bacterial regulatory proteins, lacI family VPUCM_RS13705 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VPUCM_RS13710 PF04794 YdjC-like protein VPUCM_RS13715 PF02056 Family 4 glycosyl hydrolase VPUCM_RS13715 PF11975 Family 4 glycosyl hydrolase C-terminal domain VPUCM_RS13720 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VPUCM_RS13725 PF02378 Phosphotransferase system, EIIC VPUCM_RS13730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_RS13735 PF01522 Polysaccharide deacetylase VPUCM_RS13780 PF00106 short chain dehydrogenase VPUCM_RS13785 PF10011 Predicted membrane protein (DUF2254) VPUCM_RS13795 PF03739 Lipopolysaccharide export system permease LptF/LptG VPUCM_RS13800 PF03739 Lipopolysaccharide export system permease LptF/LptG VPUCM_RS13805 PF00883 Cytosol aminopeptidase family, catalytic domain VPUCM_RS13805 PF02789 Cytosol aminopeptidase family, N-terminal domain VPUCM_RS13810 PF04364 DNA polymerase III chi subunit, HolC VPUCM_RS13815 PF10458 Valyl tRNA synthetase tRNA binding arm VPUCM_RS13815 PF00133 tRNA synthetases class I (I, L, M and V) VPUCM_RS13815 PF08264 Anticodon-binding domain of tRNA VPUCM_RS13825 PF00583 Acetyltransferase (GNAT) family VPUCM_RS13880 PF06877 Regulator of ribonuclease activity B VPUCM_RS13890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VPUCM_RS13890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VPUCM_RS13895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VPUCM_RS13895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VPUCM_RS13900 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VPUCM_RS13900 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VPUCM_RS13905 PF01042 Endoribonuclease L-PSP VPUCM_RS13910 PF01553 Acyltransferase VPUCM_RS13915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VPUCM_RS13920 PF01722 BolA-like protein VPUCM_RS13930 PF05494 MlaC protein VPUCM_RS13935 PF02470 MlaD protein VPUCM_RS13940 PF02405 Permease MlaE VPUCM_RS13945 PF00005 ABC transporter VPUCM_RS13950 PF01699 Sodium/calcium exchanger protein VPUCM_RS13955 PF00571 CBS domain VPUCM_RS13955 PF01380 SIS domain VPUCM_RS13965 PF03968 OstA-like protein VPUCM_RS13970 PF00005 ABC transporter VPUCM_RS13970 PF12399 Branched-chain amino acid ATP-binding cassette transporter VPUCM_RS13975 PF04963 Sigma-54 factor, core binding domain VPUCM_RS13975 PF00309 Sigma-54 factor, Activator interacting domain (AID) VPUCM_RS13975 PF04552 Sigma-54, DNA binding domain VPUCM_RS13980 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VPUCM_RS13985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_RS13990 PF03668 P-loop ATPase protein family VPUCM_RS13995 PF00381 PTS HPr component phosphorylation site VPUCM_RS14000 PF03448 MgtE intracellular N domain VPUCM_RS14000 PF00571 CBS domain VPUCM_RS14000 PF01769 Divalent cation transporter VPUCM_RS14005 PF01523 Putative modulator of DNA gyrase VPUCM_RS14010 PF04751 Protein of unknown function (DUF615) VPUCM_RS14015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VPUCM_RS14015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_RS14020 PF00849 RNA pseudouridylate synthase VPUCM_RS14030 PF00176 SNF2 family N-terminal domain VPUCM_RS14030 PF18337 RapA N-terminal Tudor like domain VPUCM_RS14030 PF12137 RNA polymerase recycling family C-terminal VPUCM_RS14030 PF00271 Helicase conserved C-terminal domain VPUCM_RS14030 PF18339 RapA N-terminal Tudor like domain 1 VPUCM_RS14035 PF13638 PIN domain VPUCM_RS14035 PF02562 PhoH-like protein VPUCM_RS14040 PF01523 Putative modulator of DNA gyrase VPUCM_RS14045 PF00795 Carbon-nitrogen hydrolase VPUCM_RS14050 PF13116 Protein of unknown function VPUCM_RS14050 PF13502 AsmA-like C-terminal region VPUCM_RS14055 PF00575 S1 RNA binding domain VPUCM_RS14055 PF10150 Ribonuclease E/G family VPUCM_RS14060 PF02545 Maf-like protein VPUCM_RS14065 PF04093 rod shape-determining protein MreD VPUCM_RS14070 PF04085 rod shape-determining protein MreC VPUCM_RS14110 PF07963 Prokaryotic N-terminal methylation motif VPUCM_RS14120 PF00482 Type II secretion system (T2SS), protein F VPUCM_RS14125 PF00437 Type II/IV secretion system protein VPUCM_RS14125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VPUCM_RS14135 PF01471 Putative peptidoglycan binding domain VPUCM_RS14135 PF13401 AAA domain VPUCM_RS14160 PF00563 EAL domain VPUCM_RS14160 PF17157 Gammaproteobacterial periplasmic sensor domain VPUCM_RS14160 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS14165 PF00436 Single-strand binding protein family VPUCM_RS14170 PF00196 Bacterial regulatory proteins, luxR family VPUCM_RS14175 PF00483 Nucleotidyl transferase VPUCM_RS14180 PF17755 UvrA DNA-binding domain VPUCM_RS14180 PF00005 ABC transporter VPUCM_RS14180 PF17760 UvrA interaction domain VPUCM_RS14190 PF00266 Aminotransferase class-V VPUCM_RS14200 PF01842 ACT domain VPUCM_RS14200 PF00696 Amino acid kinase family VPUCM_RS14205 PF02574 Homocysteine S-methyltransferase VPUCM_RS14205 PF00809 Pterin binding enzyme VPUCM_RS14205 PF02310 B12 binding domain VPUCM_RS14205 PF02607 B12 binding domain VPUCM_RS14205 PF02965 Vitamin B12 dependent methionine synthase, activation domain VPUCM_RS14210 PF00999 Sodium/hydrogen exchanger family VPUCM_RS14250 PF01507 Phosphoadenosine phosphosulfate reductase family VPUCM_RS14255 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VPUCM_RS14255 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VPUCM_RS14260 PF00667 FAD binding domain VPUCM_RS14260 PF00258 Flavodoxin VPUCM_RS14260 PF00175 Oxidoreductase NAD-binding domain VPUCM_RS14280 PF01207 Dihydrouridine synthase (Dus) VPUCM_RS14285 PF01475 Ferric uptake regulator family VPUCM_RS14295 PF00342 Phosphoglucose isomerase VPUCM_RS14300 PF01894 Uncharacterised protein family UPF0047 VPUCM_RS14310 PF00842 Alanine racemase, C-terminal domain VPUCM_RS14310 PF01168 Alanine racemase, N-terminal domain VPUCM_RS14315 PF00772 DnaB-like helicase N terminal domain VPUCM_RS14315 PF03796 DnaB-like helicase C terminal domain VPUCM_RS14325 PF03948 Ribosomal protein L9, C-terminal domain VPUCM_RS14325 PF01281 Ribosomal protein L9, N-terminal domain VPUCM_RS14330 PF01084 Ribosomal protein S18 VPUCM_RS14335 PF00436 Single-strand binding protein family VPUCM_RS14340 PF01250 Ribosomal protein S6 VPUCM_RS14345 PF00834 Ribulose-phosphate 3 epimerase family VPUCM_RS14350 PF02086 D12 class N6 adenine-specific DNA methyltransferase VPUCM_RS14360 PF01761 3-dehydroquinate synthase VPUCM_RS14365 PF01202 Shikimate kinase VPUCM_RS14370 PF00263 Bacterial type II and III secretion system protein VPUCM_RS14370 PF11741 AMIN domain VPUCM_RS14370 PF07660 Secretin and TonB N terminus short domain VPUCM_RS14370 PF03958 Bacterial type II/III secretion system short domain VPUCM_RS14375 PF04351 Pilus assembly protein, PilP VPUCM_RS14385 PF05137 Fimbrial assembly protein (PilN) VPUCM_RS14395 PF00912 Transglycosylase VPUCM_RS14395 PF17092 Penicillin-binding protein OB-like domain VPUCM_RS14395 PF00905 Penicillin binding protein transpeptidase domain VPUCM_RS14400 PF03466 LysR substrate binding domain VPUCM_RS14400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS14405 PF00462 Glutaredoxin VPUCM_RS14405 PF08534 Redoxin VPUCM_RS14415 PF00206 Lyase VPUCM_RS14415 PF14698 Argininosuccinate lyase C-terminal VPUCM_RS14415 PF00583 Acetyltransferase (GNAT) family VPUCM_RS14420 PF00764 Arginosuccinate synthase VPUCM_RS14425 PF00696 Amino acid kinase family VPUCM_RS14430 PF02774 Semialdehyde dehydrogenase, dimerisation domain VPUCM_RS14430 PF01118 Semialdehyde dehydrogenase, NAD binding domain VPUCM_RS14435 PF07687 Peptidase dimerisation domain VPUCM_RS14435 PF01546 Peptidase family M20/M25/M40 VPUCM_RS14440 PF00311 Phosphoenolpyruvate carboxylase VPUCM_RS14450 PF02219 Methylenetetrahydrofolate reductase VPUCM_RS14455 PF03447 Homoserine dehydrogenase, NAD binding domain VPUCM_RS14455 PF00742 Homoserine dehydrogenase VPUCM_RS14455 PF00696 Amino acid kinase family VPUCM_RS14460 PF01053 Cys/Met metabolism PLP-dependent enzyme VPUCM_RS14465 PF01340 Met Apo-repressor, MetJ VPUCM_RS14470 PF03949 Malic enzyme, NAD binding domain VPUCM_RS14470 PF00390 Malic enzyme, N-terminal domain VPUCM_RS14475 PF00210 Ferritin-like domain VPUCM_RS14480 PF04324 BFD-like [2Fe-2S] binding domain VPUCM_RS14485 PF03143 Elongation factor Tu C-terminal domain VPUCM_RS14485 PF03144 Elongation factor Tu domain 2 VPUCM_RS14485 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS14490 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS14490 PF03144 Elongation factor Tu domain 2 VPUCM_RS14490 PF14492 Elongation Factor G, domain II VPUCM_RS14490 PF03764 Elongation factor G, domain IV VPUCM_RS14490 PF00679 Elongation factor G C-terminus VPUCM_RS14495 PF00177 Ribosomal protein S7p/S5e VPUCM_RS14500 PF00164 Ribosomal protein S12/S23 VPUCM_RS14505 PF04077 DsrH like protein VPUCM_RS14510 PF02635 DsrE/DsrF-like family VPUCM_RS14515 PF02635 DsrE/DsrF-like family VPUCM_RS14520 PF13309 HTH domain VPUCM_RS14520 PF08348 YheO-like PAS domain VPUCM_RS14525 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VPUCM_RS14525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_RS14535 PF04102 SlyX VPUCM_RS14540 PF01112 Asparaginase VPUCM_RS14545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_RS14555 PF02254 TrkA-N domain VPUCM_RS14555 PF00999 Sodium/hydrogen exchanger family VPUCM_RS14560 PF02525 Flavodoxin-like fold VPUCM_RS14565 PF00005 ABC transporter VPUCM_RS14565 PF12848 ABC transporter VPUCM_RS14575 PF00561 alpha/beta hydrolase fold VPUCM_RS14580 PF06794 Uncharacterised protein family (UPF0270) VPUCM_RS14585 PF00485 Phosphoribulokinase / Uridine kinase family VPUCM_RS14590 PF00027 Cyclic nucleotide-binding domain VPUCM_RS14590 PF13545 Crp-like helix-turn-helix domain VPUCM_RS14600 PF00171 Aldehyde dehydrogenase family VPUCM_RS14605 PF04958 Arginine N-succinyltransferase beta subunit VPUCM_RS14610 PF00202 Aminotransferase class-III VPUCM_RS14615 PF00117 Glutamine amidotransferase class-I VPUCM_RS14630 PF00579 tRNA synthetases class I (W and Y) VPUCM_RS14635 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_RS14640 PF08032 RNA 2'-O ribose methyltransferase substrate binding VPUCM_RS14640 PF00588 SpoU rRNA Methylase family VPUCM_RS14645 PF17876 Cold shock domain VPUCM_RS14645 PF08206 Ribonuclease B OB domain VPUCM_RS14645 PF08461 Ribonuclease R winged-helix domain VPUCM_RS14645 PF00773 RNB domain VPUCM_RS14645 PF00575 S1 RNA binding domain VPUCM_RS14650 PF02082 Transcriptional regulator VPUCM_RS14655 PF00970 Oxidoreductase FAD-binding domain VPUCM_RS14655 PF00042 Globin VPUCM_RS14655 PF00175 Oxidoreductase NAD-binding domain VPUCM_RS14660 PF08238 Sel1 repeat VPUCM_RS14665 PF00709 Adenylosuccinate synthetase VPUCM_RS14670 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VPUCM_RS14675 PF01145 SPFH domain / Band 7 family VPUCM_RS14680 PF12221 Bacterial membrane protein N terminal VPUCM_RS14680 PF01145 SPFH domain / Band 7 family VPUCM_RS14685 PF16360 GTP-binding GTPase Middle Region VPUCM_RS14685 PF13167 GTP-binding GTPase N-terminal VPUCM_RS14685 PF01926 50S ribosome-binding GTPase VPUCM_RS14690 PF17209 Hfq protein VPUCM_RS14700 PF08676 MutL C terminal dimerisation domain VPUCM_RS14700 PF01119 DNA mismatch repair protein, C-terminal domain VPUCM_RS14705 PF01520 N-acetylmuramoyl-L-alanine amidase VPUCM_RS14710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VPUCM_RS14715 PF08331 Domain of unknown function (DUF1730) VPUCM_RS14790 PF00929 Exonuclease VPUCM_RS14795 PF03193 RsgA GTPase VPUCM_RS14800 PF02666 Phosphatidylserine decarboxylase VPUCM_RS14805 PF00939 Sodium:sulfate symporter transmembrane region VPUCM_RS14810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS14810 PF00672 HAMP domain VPUCM_RS14820 PF01676 Metalloenzyme superfamily VPUCM_RS14820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VPUCM_RS14830 PF00581 Rhodanese-like domain VPUCM_RS14835 PF02556 Preprotein translocase subunit SecB VPUCM_RS14840 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VPUCM_RS14840 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VPUCM_RS14845 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_RS14845 PF06426 Serine acetyltransferase, N-terminal VPUCM_RS14850 PF01551 Peptidase family M23 VPUCM_RS14860 PF08360 QacR-like protein, C-terminal region VPUCM_RS14860 PF00440 Bacterial regulatory proteins, tetR family VPUCM_RS14870 PF00152 tRNA synthetases class II (D, K and N) VPUCM_RS14875 PF02910 Fumarate reductase flavoprotein C-term VPUCM_RS14875 PF00890 FAD binding domain VPUCM_RS14880 PF13085 2Fe-2S iron-sulfur cluster binding domain VPUCM_RS14880 PF13183 4Fe-4S dicluster domain VPUCM_RS14885 PF02300 Fumarate reductase subunit C VPUCM_RS14890 PF02313 Fumarate reductase subunit D VPUCM_RS14900 PF09285 Elongation factor P, C-terminal VPUCM_RS14900 PF01132 Elongation factor P (EF-P) OB domain VPUCM_RS14900 PF08207 Elongation factor P (EF-P) KOW-like domain VPUCM_RS14905 PF04055 Radical SAM superfamily VPUCM_RS14910 PF00842 Alanine racemase, C-terminal domain VPUCM_RS14910 PF01168 Alanine racemase, N-terminal domain VPUCM_RS14920 PF02308 MgtC family VPUCM_RS14930 PF00118 TCP-1/cpn60 chaperonin family VPUCM_RS14935 PF00166 Chaperonin 10 Kd subunit VPUCM_RS14940 PF01554 MatE VPUCM_RS14945 PF00365 Phosphofructokinase VPUCM_RS14950 PF16916 Dimerisation domain of Zinc Transporter VPUCM_RS14950 PF01545 Cation efflux family VPUCM_RS14955 PF07813 LTXXQ motif family protein VPUCM_RS14960 PF00072 Response regulator receiver domain VPUCM_RS14960 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS14965 PF16527 Two-component sensor protein CpxA, periplasmic domain VPUCM_RS14965 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS14965 PF00672 HAMP domain VPUCM_RS14970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VPUCM_RS14970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VPUCM_RS14975 PF00588 SpoU rRNA Methylase family VPUCM_RS14980 PF04186 FxsA cytoplasmic membrane protein VPUCM_RS14985 PF00206 Lyase VPUCM_RS14985 PF10415 Fumarase C C-terminus VPUCM_RS14990 PF03605 Anaerobic c4-dicarboxylate membrane transporter VPUCM_RS14995 PF11412 Disulphide bond corrector protein DsbC VPUCM_RS14995 PF02683 Cytochrome C biogenesis protein transmembrane region VPUCM_RS15000 PF00072 Response regulator receiver domain VPUCM_RS15000 PF00196 Bacterial regulatory proteins, luxR family VPUCM_RS15005 PF03471 Transporter associated domain VPUCM_RS15005 PF00999 Sodium/hydrogen exchanger family VPUCM_RS15005 PF02080 TrkA-C domain VPUCM_RS15015 PF00474 Sodium:solute symporter family VPUCM_RS15030 PF00206 Lyase VPUCM_RS15030 PF10415 Fumarase C C-terminus VPUCM_RS15035 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_RS15035 PF09308 LuxQ, periplasmic VPUCM_RS15035 PF00072 Response regulator receiver domain VPUCM_RS15035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_RS15040 PF12832 MFS_1 like family VPUCM_RS15055 PF00501 AMP-binding enzyme VPUCM_RS15055 PF16177 Acetyl-coenzyme A synthetase N-terminus VPUCM_RS15055 PF13193 AMP-binding enzyme C-terminal domain VPUCM_RS15060 PF01220 Dehydroquinase class II VPUCM_RS15065 PF00364 Biotin-requiring enzyme VPUCM_RS15070 PF02785 Biotin carboxylase C-terminal domain VPUCM_RS15070 PF00289 Biotin carboxylase, N-terminal domain VPUCM_RS15070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VPUCM_RS15080 PF01207 Dihydrouridine synthase (Dus) VPUCM_RS15085 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS15090 PF07690 Major Facilitator Superfamily VPUCM_RS15095 PF00005 ABC transporter VPUCM_RS15095 PF12848 ABC transporter VPUCM_RS15100 PF05230 MASE2 domain VPUCM_RS15100 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS15130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VPUCM_RS15130 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VPUCM_RS15130 PF01276 Orn/Lys/Arg decarboxylase, major domain VPUCM_RS15135 PF13520 Amino acid permease VPUCM_RS15140 PF00486 Transcriptional regulatory protein, C terminal VPUCM_RS15140 PF18500 CadC C-terminal domain 1 VPUCM_RS15145 PF13411 MerR HTH family regulatory protein VPUCM_RS15150 PF02142 MGS-like domain VPUCM_RS15150 PF01808 AICARFT/IMPCHase bienzyme VPUCM_RS15155 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VPUCM_RS15155 PF02843 Phosphoribosylglycinamide synthetase, C domain VPUCM_RS15155 PF02844 Phosphoribosylglycinamide synthetase, N domain VPUCM_RS15165 PF00216 Bacterial DNA-binding protein VPUCM_RS15170 PF00571 CBS domain VPUCM_RS15170 PF01595 Cyclin M transmembrane N-terminal domain VPUCM_RS15175 PF04222 Protein of unknown function (DUF416) VPUCM_RS15180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_RS15185 PF03167 Uracil DNA glycosylase superfamily VPUCM_RS15190 PF01208 Uroporphyrinogen decarboxylase (URO-D) VPUCM_RS15205 PF00293 NUDIX domain VPUCM_RS15205 PF09297 NADH pyrophosphatase zinc ribbon domain VPUCM_RS15210 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VPUCM_RS15215 PF05000 RNA polymerase Rpb1, domain 4 VPUCM_RS15215 PF04998 RNA polymerase Rpb1, domain 5 VPUCM_RS15215 PF04983 RNA polymerase Rpb1, domain 3 VPUCM_RS15215 PF00623 RNA polymerase Rpb1, domain 2 VPUCM_RS15215 PF04997 RNA polymerase Rpb1, domain 1 VPUCM_RS15220 PF04565 RNA polymerase Rpb2, domain 3 VPUCM_RS15220 PF04560 RNA polymerase Rpb2, domain 7 VPUCM_RS15220 PF00562 RNA polymerase Rpb2, domain 6 VPUCM_RS15220 PF10385 RNA polymerase beta subunit external 1 domain VPUCM_RS15220 PF04561 RNA polymerase Rpb2, domain 2 VPUCM_RS15220 PF04563 RNA polymerase beta subunit VPUCM_RS15225 PF00542 Ribosomal protein L7/L12 C-terminal domain VPUCM_RS15225 PF16320 Ribosomal protein L7/L12 dimerisation domain VPUCM_RS15230 PF00466 Ribosomal protein L10 VPUCM_RS15235 PF00687 Ribosomal protein L1p/L10e family VPUCM_RS15240 PF00298 Ribosomal protein L11, RNA binding domain VPUCM_RS15240 PF03946 Ribosomal protein L11, N-terminal domain VPUCM_RS15245 PF02357 Transcription termination factor nusG VPUCM_RS15245 PF00467 KOW motif VPUCM_RS15250 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VPUCM_RS15255 PF03143 Elongation factor Tu C-terminal domain VPUCM_RS15255 PF03144 Elongation factor Tu domain 2 VPUCM_RS15255 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS15280 PF00485 Phosphoribulokinase / Uridine kinase family VPUCM_RS15285 PF08279 HTH domain VPUCM_RS15285 PF03099 Biotin/lipoate A/B protein ligase family VPUCM_RS15285 PF02237 Biotin protein ligase C terminal domain VPUCM_RS15290 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VPUCM_RS15290 PF01565 FAD binding domain VPUCM_RS15300 PF13091 PLD-like domain VPUCM_RS15340 PF01177 Asp/Glu/Hydantoin racemase VPUCM_RS15350 PF00593 TonB dependent receptor VPUCM_RS15350 PF07715 TonB-dependent Receptor Plug Domain VPUCM_RS15355 PF05958 tRNA (Uracil-5-)-methyltransferase VPUCM_RS15365 PF00440 Bacterial regulatory proteins, tetR family VPUCM_RS15370 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_RS15370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VPUCM_RS15375 PF01554 MatE VPUCM_RS15380 PF04072 Leucine carboxyl methyltransferase VPUCM_RS15385 PF01726 LexA DNA binding domain VPUCM_RS15385 PF00717 Peptidase S24-like VPUCM_RS15390 PF01553 Acyltransferase VPUCM_RS15395 PF01040 UbiA prenyltransferase family VPUCM_RS15400 PF04345 Chorismate lyase VPUCM_RS15405 PF03748 Flagellar basal body-associated protein FliL VPUCM_RS15410 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VPUCM_RS15410 PF01694 Rhomboid family VPUCM_RS15415 PF00581 Rhodanese-like domain VPUCM_RS15420 PF04545 Sigma-70, region 4 VPUCM_RS15420 PF04542 Sigma-70 region 2 VPUCM_RS15420 PF00140 Sigma-70 factor, region 1.2 VPUCM_RS15425 PF18075 FtsX extracellular domain VPUCM_RS15430 PF00005 ABC transporter VPUCM_RS15435 PF00448 SRP54-type protein, GTPase domain VPUCM_RS15435 PF02881 SRP54-type protein, helical bundle domain VPUCM_RS15450 PF01914 MarC family integral membrane protein VPUCM_RS15505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPUCM_RS15505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VPUCM_RS15510 PF01022 Bacterial regulatory protein, arsR family VPUCM_RS15515 PF00563 EAL domain VPUCM_RS15515 PF08668 HDOD domain VPUCM_RS15520 PF01810 LysE type translocator VPUCM_RS15525 PF12146 Serine aminopeptidase, S33 VPUCM_RS15545 PF03942 DTW domain VPUCM_RS15550 PF00563 EAL domain VPUCM_RS15550 PF08495 FIST N domain VPUCM_RS15550 PF10442 FIST C domain VPUCM_RS15550 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS15555 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_RS15560 PF00589 Phage integrase family VPUCM_RS15560 PF02899 Phage integrase, N-terminal SAM-like domain VPUCM_RS15570 PF01678 Diaminopimelate epimerase VPUCM_RS15575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VPUCM_RS15575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VPUCM_RS15585 PF01491 Frataxin-like domain VPUCM_RS15590 PF01295 Adenylate cyclase, class-I VPUCM_RS15590 PF12633 Adenylate cyclase NT domain VPUCM_RS15595 PF03900 Porphobilinogen deaminase, C-terminal domain VPUCM_RS15595 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VPUCM_RS15600 PF02602 Uroporphyrinogen-III synthase HemD VPUCM_RS15605 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VPUCM_RS15610 PF07219 HemY protein N-terminus VPUCM_RS15630 PF00175 Oxidoreductase NAD-binding domain VPUCM_RS15635 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_RS15640 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VPUCM_RS15650 PF07497 Rho termination factor, RNA-binding domain VPUCM_RS15650 PF07498 Rho termination factor, N-terminal domain VPUCM_RS15650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_RS15655 PF00085 Thioredoxin VPUCM_RS15660 PF00270 DEAD/DEAH box helicase VPUCM_RS15660 PF00271 Helicase conserved C-terminal domain VPUCM_RS15665 PF02541 Ppx/GppA phosphatase family VPUCM_RS15670 PF02592 Putative vitamin uptake transporter VPUCM_RS15680 PF00570 HRDC domain VPUCM_RS15680 PF16124 RecQ zinc-binding VPUCM_RS15680 PF09382 RQC domain VPUCM_RS15680 PF00270 DEAD/DEAH box helicase VPUCM_RS15680 PF00271 Helicase conserved C-terminal domain VPUCM_RS15685 PF00892 EamA-like transporter family VPUCM_RS15695 PF01810 LysE type translocator VPUCM_RS15705 PF00580 UvrD/REP helicase N-terminal domain VPUCM_RS15705 PF13361 UvrD-like helicase C-terminal domain VPUCM_RS15715 PF05114 Protein of unknown function (DUF692) VPUCM_RS15735 PF07690 Major Facilitator Superfamily VPUCM_RS15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS15740 PF03466 LysR substrate binding domain VPUCM_RS15745 PF01321 Creatinase/Prolidase N-terminal domain VPUCM_RS15745 PF00557 Metallopeptidase family M24 VPUCM_RS15745 PF01321 Creatinase/Prolidase N-terminal domain VPUCM_RS15745 PF00557 Metallopeptidase family M24 VPUCM_RS15750 PF06968 Biotin and Thiamin Synthesis associated domain VPUCM_RS15750 PF04055 Radical SAM superfamily VPUCM_RS15755 PF05690 Thiazole biosynthesis protein ThiG VPUCM_RS15760 PF02597 ThiS family VPUCM_RS15765 PF00899 ThiF family VPUCM_RS15770 PF02581 Thiamine monophosphate synthase VPUCM_RS15775 PF13667 ThiC-associated domain VPUCM_RS15775 PF01964 Radical SAM ThiC family VPUCM_RS15780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VPUCM_RS15825 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_RS15830 PF07369 Protein of unknown function (DUF1488) VPUCM_RS15835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VPUCM_RS15835 PF01488 Shikimate / quinate 5-dehydrogenase VPUCM_RS15835 PF08501 Shikimate dehydrogenase substrate binding domain VPUCM_RS15840 PF01218 Coproporphyrinogen III oxidase VPUCM_RS15845 PF01300 Telomere recombination VPUCM_RS15850 PF00731 AIR carboxylase VPUCM_RS15855 PF02222 ATP-grasp domain VPUCM_RS15855 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VPUCM_RS15860 PF01396 Topoisomerase DNA binding C4 zinc finger VPUCM_RS15865 PF04361 Protein of unknown function (DUF494) VPUCM_RS15870 PF17782 DprA winged helix domain VPUCM_RS15870 PF02481 DNA recombination-mediator protein A VPUCM_RS15880 PF01327 Polypeptide deformylase VPUCM_RS15885 PF02911 Formyl transferase, C-terminal domain VPUCM_RS15885 PF00551 Formyl transferase VPUCM_RS15890 PF01189 16S rRNA methyltransferase RsmB/F VPUCM_RS15890 PF01029 NusB family VPUCM_RS15895 PF02080 TrkA-C domain VPUCM_RS15895 PF02254 TrkA-N domain VPUCM_RS15900 PF02386 Cation transport protein VPUCM_RS15910 PF03006 Haemolysin-III related VPUCM_RS15915 PF07070 SpoOM protein VPUCM_RS15920 PF06288 Protein of unknown function (DUF1040) VPUCM_RS15925 PF13746 4Fe-4S dicluster domain VPUCM_RS15925 PF12801 4Fe-4S binding domain VPUCM_RS15925 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VPUCM_RS15930 PF01636 Phosphotransferase enzyme family VPUCM_RS15935 PF01323 DSBA-like thioredoxin domain VPUCM_RS15940 PF01553 Acyltransferase VPUCM_RS15950 PF01078 Magnesium chelatase, subunit ChlI VPUCM_RS15950 PF13335 Magnesium chelatase, subunit ChlI C-terminal VPUCM_RS15955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VPUCM_RS15955 PF00205 Thiamine pyrophosphate enzyme, central domain VPUCM_RS15955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VPUCM_RS15965 PF01063 Amino-transferase class IV VPUCM_RS15970 PF00920 Dehydratase family VPUCM_RS15975 PF00585 C-terminal regulatory domain of Threonine dehydratase VPUCM_RS15975 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_RS15980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_RS15980 PF03466 LysR substrate binding domain VPUCM_RS15985 PF07690 Major Facilitator Superfamily VPUCM_RS15990 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_RS15995 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_RS16000 PF12804 MobA-like NTP transferase domain VPUCM_RS16000 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_RS16005 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VPUCM_RS16005 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VPUCM_RS16010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_RS16010 PF02874 ATP synthase alpha/beta family, beta-barrel domain VPUCM_RS16015 PF00231 ATP synthase VPUCM_RS16020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_RS16020 PF02874 ATP synthase alpha/beta family, beta-barrel domain VPUCM_RS16020 PF00306 ATP synthase alpha/beta chain, C terminal domain VPUCM_RS16025 PF00213 ATP synthase delta (OSCP) subunit VPUCM_RS16030 PF00430 ATP synthase B/B' CF(0) VPUCM_RS16035 PF00137 ATP synthase subunit C VPUCM_RS16040 PF00119 ATP synthase A chain VPUCM_RS16045 PF03899 ATP synthase I chain VPUCM_RS16050 PF17762 HTH domain found in ParB protein VPUCM_RS16050 PF02195 ParB-like nuclease domain VPUCM_RS16055 PF13614 AAA domain VPUCM_RS16060 PF02527 rRNA small subunit methyltransferase G VPUCM_RS16065 PF13932 GidA associated domain VPUCM_RS16065 PF01134 Glucose inhibited division protein A VPUCM_RS16180 PF02092 Glycyl-tRNA synthetase beta subunit VPUCM_RS16180 PF05746 DALR anticodon binding domain VPUCM_RS16220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VPUCM_RS16220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VPUCM_RS16220 PF00378 Enoyl-CoA hydratase/isomerase VPUCM_RS16410 PF00069 Protein kinase domain VPUCM_RS16570 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS16570 PF03707 Bacterial signalling protein N terminal repeat VPUCM_RS16570 PF00563 EAL domain VPUCM_RS16735 PF00679 Elongation factor G C-terminus VPUCM_RS16735 PF03144 Elongation factor Tu domain 2 VPUCM_RS16735 PF00009 Elongation factor Tu GTP binding domain VPUCM_RS16760 PF03631 Virulence factor BrkB VPUCM_RS16780 PF01293 Phosphoenolpyruvate carboxykinase VPUCM_RS16835 PF03934 Type II secretion system (T2SS), protein K VPUCM_RS16930 PF00270 DEAD/DEAH box helicase VPUCM_RS16930 PF00271 Helicase conserved C-terminal domain VPUCM_RS16930 PF17191 RecG wedge domain VPUCM_RS16945 PF02824 TGS domain VPUCM_RS16945 PF04607 Region found in RelA / SpoT proteins VPUCM_RS16945 PF13291 ACT domain VPUCM_RS17305 PF00483 Nucleotidyl transferase VPUCM_RS17660 PF02872 5'-nucleotidase, C-terminal domain VPUCM_RS17660 PF00149 Calcineurin-like phosphoesterase VPUCM_RS17670 PF14824 Sirohaem biosynthesis protein central VPUCM_RS17670 PF10414 Sirohaem synthase dimerisation region VPUCM_RS17670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VPUCM_RS17810 PF01018 GTP1/OBG VPUCM_RS17810 PF01926 50S ribosome-binding GTPase VPUCM_RS18080 PF00140 Sigma-70 factor, region 1.2 VPUCM_RS18080 PF03979 Sigma-70 factor, region 1.1 VPUCM_RS18080 PF04539 Sigma-70 region 3 VPUCM_RS18080 PF04546 Sigma-70, non-essential region VPUCM_RS18080 PF04545 Sigma-70, region 4 VPUCM_RS18080 PF04542 Sigma-70 region 2 VPUCM_RS18155 PF01384 Phosphate transporter family VPUCM_RS18230 PF00521 DNA gyrase/topoisomerase IV, subunit A VPUCM_RS18230 PF03989 DNA gyrase C-terminal domain, beta-propeller VPUCM_RS18235 PF00521 DNA gyrase/topoisomerase IV, subunit A VPUCM_RS18235 PF03989 DNA gyrase C-terminal domain, beta-propeller VPUCM_RS18560 PF08544 GHMP kinases C terminal VPUCM_RS18560 PF00288 GHMP kinases N terminal domain VPUCM_RS18650 PF00158 Sigma-54 interaction domain VPUCM_RS18650 PF00989 PAS fold VPUCM_RS18650 PF02954 Bacterial regulatory protein, Fis family VPUCM_RS18855 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_RS18855 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_RS18855 PF02861 Clp amino terminal domain, pathogenicity island component VPUCM_RS18855 PF17871 AAA lid domain VPUCM_RS18855 PF07724 AAA domain (Cdc48 subfamily) VPUCM_RS19335 PF00684 DnaJ central domain VPUCM_RS19335 PF01556 DnaJ C terminal domain VPUCM_RS19335 PF00226 DnaJ domain VPUCM_RS19440 PF02576 RimP N-terminal domain VPUCM_RS19440 PF17384 RimP C-terminal SH3 domain VPUCM_RS19605 PF00990 Diguanylate cyclase, GGDEF domain VPUCM_RS19605 PF00563 EAL domain VPUCM_RS19605 PF03707 Bacterial signalling protein N terminal repeat VPUCM_RS19870 PF00012 Hsp70 protein VPUCM_RS19910 PF00226 DnaJ domain VPUCM_RS19910 PF01556 DnaJ C terminal domain VPUCM_RS20135 PF00437 Type II/IV secretion system protein VPUCM_RS20455 PF02508 Rnf-Nqr subunit, membrane protein VPUCM_RS20710 PF09317 Domain of unknown function (DUF1974) VPUCM_RS20710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_RS20710 PF02770 Acyl-CoA dehydrogenase, middle domain VPUCM_RS20710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_RS20775 PF03485 Arginyl tRNA synthetase N terminal domain VPUCM_RS20775 PF00750 tRNA synthetases class I (R) VPUCM_RS20775 PF05746 DALR anticodon binding domain VPUCM_RS20790 PF04851 Type III restriction enzyme, res subunit VPUCM_RS20790 PF13307 Helicase C-terminal domain VPUCM_RS20830 PF13406 Transglycosylase SLT domain VPUCM_RS20900 PF00221 Aromatic amino acid lyase VPUCM_RS20915 PF00535 Glycosyl transferase family 2 VPUCM_RS21100 PF16582 Middle domain of thiamine pyrophosphate VPUCM_RS21100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VPUCM_RS21100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VPUCM_RS21340 PF00403 Heavy-metal-associated domain VPUCM_RS21350 PF00403 Heavy-metal-associated domain VPUCM_RS21445 PF00271 Helicase conserved C-terminal domain VPUCM_RS21445 PF02559 CarD-like/TRCF domain VPUCM_RS21445 PF17757 UvrB interaction domain VPUCM_RS21445 PF03461 TRCF domain VPUCM_RS21445 PF00270 DEAD/DEAH box helicase VPUCM_RS22115 PF00294 pfkB family carbohydrate kinase VPUCM_RS22740 PF04317 YcjX-like family, DUF463 VPUCM_RS22760 PF00158 Sigma-54 interaction domain VPUCM_RS22760 PF18024 Helix-turn-helix domain VPUCM_RS22760 PF13188 PAS domain VPUCM_RS23290 PF00672 HAMP domain VPUCM_RS23290 PF12729 Four helix bundle sensory module for signal transduction VPUCM_RS23290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_RS23425 PF03222 Tryptophan/tyrosine permease family VPUCM_RS23560 PF11898 Domain of unknown function (DUF3418) VPUCM_RS23560 PF00270 DEAD/DEAH box helicase VPUCM_RS23560 PF04408 Helicase associated domain (HA2) VPUCM_RS23560 PF00271 Helicase conserved C-terminal domain VPUCM_RS23560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VPUCM_RS23625 PF00308 Bacterial dnaA protein VPUCM_RS23625 PF08299 Bacterial dnaA protein helix-turn-helix VPUCM_RS23625 PF11638 DnaA N-terminal domain VPUCM_RS23650 PF02463 RecF/RecN/SMC N terminal domain VPUCM_RS23950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_RS24070 PF02447 GntP family permease VPUCM_RS24100 PF01432 Peptidase family M3 VPUCM_RS24150 PF01966 HD domain VPUCM_RS24150 PF13286 Phosphohydrolase-associated domain VPUCM_RS24160 PF13676 TIR domain VPUCM_RS24165 PF12102 Domain of unknown function (DUF3578) VPUCM_RS24165 PF07728 AAA domain (dynein-related subfamily)