VPUCM_RS09265 1568f2146a7f0a2d8fce3c58756aec70 156 Pfam PF00583 Acetyltransferase (GNAT) family 61 144 8.4E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS09265 1568f2146a7f0a2d8fce3c58756aec70 156 Gene3D G3DSA:3.40.630.30 2 143 8.9E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS09265 1568f2146a7f0a2d8fce3c58756aec70 156 SUPERFAMILY SSF55729 1 143 1.29E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS09265 1568f2146a7f0a2d8fce3c58756aec70 156 PANTHER PTHR23091 1 143 9.1E-19 T 22-04-2016 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 SUPERFAMILY SSF52540 37 82 5.89E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.971 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 SMART SM00487 9 426 1.8E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Pfam PF02151 UvrB/uvrC motif 636 671 4.4E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Pfam PF00271 Helicase conserved C-terminal domain 436 546 8.6E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 SUPERFAMILY SSF46600 625 672 1.57E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Gene3D G3DSA:4.10.860.10 617 673 2.5E-17 T 22-04-2016 IPR001943 UVR domain GO:0005515 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 SUPERFAMILY SSF52540 5 416 7.81E-137 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 3.4E-21 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 129 4.1E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Gene3D G3DSA:3.40.50.300 420 581 5.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 PANTHER PTHR24029 1 674 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 SMART SM00490 461 547 2.7E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Gene3D G3DSA:3.40.50.300 389 407 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Gene3D G3DSA:3.40.50.300 6 89 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Gene3D G3DSA:3.40.50.300 279 339 5.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 Gene3D G3DSA:3.30.2060.10 159 231 8.3E-12 T 22-04-2016 VPUCM_RS05625 38a566fa8a8d936fbaf3b5559aa2c262 676 SUPERFAMILY SSF52540 460 584 5.89E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 3.4E-87 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 Gene3D G3DSA:3.30.465.10 76 233 1.8E-50 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 PANTHER PTHR21071:SF6 1 340 4.7E-157 T 22-04-2016 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 Gene3D G3DSA:3.90.78.10 234 340 4.2E-39 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 Gene3D G3DSA:3.30.43.10 8 71 6.1E-22 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 Pfam PF01565 FAD binding domain 23 144 2.3E-18 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.617 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 SUPERFAMILY SSF56194 207 341 1.31E-46 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 PANTHER PTHR21071 1 340 4.7E-157 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 5.3E-31 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15290 6d5ee329934d322fe34e0aaf86467fd0 347 SUPERFAMILY SSF56176 8 198 1.85E-41 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VPUCM_RS02850 2d2c7580b2626e3db3afd235ae5e38b7 557 SUPERFAMILY SSF161098 283 538 1.96E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02850 2d2c7580b2626e3db3afd235ae5e38b7 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 4.1E-76 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VPUCM_RS02850 2d2c7580b2626e3db3afd235ae5e38b7 557 PANTHER PTHR30425 196 554 2.8E-243 T 22-04-2016 VPUCM_RS02850 2d2c7580b2626e3db3afd235ae5e38b7 557 Gene3D G3DSA:1.10.3720.10 283 552 1.1E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02850 2d2c7580b2626e3db3afd235ae5e38b7 557 Gene3D G3DSA:1.10.3720.10 24 43 1.1E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02850 2d2c7580b2626e3db3afd235ae5e38b7 557 PANTHER PTHR30425:SF7 196 554 2.8E-243 T 22-04-2016 VPUCM_RS02850 2d2c7580b2626e3db3afd235ae5e38b7 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 1.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS01375 1aae5c846a2c0ce946739ee99bce9825 335 SUPERFAMILY SSF56655 1 324 4.03E-106 T 22-04-2016 VPUCM_RS01375 1aae5c846a2c0ce946739ee99bce9825 335 PIRSF PIRSF004532 1 331 4.6E-134 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VPUCM_RS01375 1aae5c846a2c0ce946739ee99bce9825 335 Gene3D G3DSA:3.30.540.10 171 328 4.8E-45 T 22-04-2016 VPUCM_RS01375 1aae5c846a2c0ce946739ee99bce9825 335 Gene3D G3DSA:3.30.540.10 1 170 6.3E-66 T 22-04-2016 VPUCM_RS01375 1aae5c846a2c0ce946739ee99bce9825 335 PANTHER PTHR30447:SF0 1 335 1.4E-177 T 22-04-2016 VPUCM_RS01375 1aae5c846a2c0ce946739ee99bce9825 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 8.1E-128 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VPUCM_RS01375 1aae5c846a2c0ce946739ee99bce9825 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 1.1E-165 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VPUCM_RS01375 1aae5c846a2c0ce946739ee99bce9825 335 PANTHER PTHR30447 1 335 1.4E-177 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 SUPERFAMILY SSF111369 178 253 1.1E-5 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 Gene3D G3DSA:2.40.50.100 197 231 9.2E-20 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 Gene3D G3DSA:2.40.50.100 44 77 9.2E-20 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 SUPERFAMILY SSF111369 38 96 1.2E-9 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 Pfam PF13533 Biotin-lipoyl like 44 88 7.6E-17 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 PANTHER PTHR30367:SF6 1 354 7.0E-71 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 Pfam PF13437 HlyD family secretion protein 200 268 2.5E-6 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 SUPERFAMILY SSF111369 109 166 3.14E-6 T 22-04-2016 VPUCM_RS06210 428d4c2b4181a2713815a8b4a45dfb01 354 PANTHER PTHR30367 1 354 7.0E-71 T 22-04-2016 VPUCM_RS03285 1078241dc5e82d3a5f482c987455f67e 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.571 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VPUCM_RS03285 1078241dc5e82d3a5f482c987455f67e 294 Pfam PF01513 ATP-NAD kinase 8 273 6.0E-72 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VPUCM_RS03285 1078241dc5e82d3a5f482c987455f67e 294 Gene3D G3DSA:3.40.50.10330 4 151 6.4E-41 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VPUCM_RS03285 1078241dc5e82d3a5f482c987455f67e 294 PANTHER PTHR20275 8 290 1.3E-116 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VPUCM_RS03285 1078241dc5e82d3a5f482c987455f67e 294 Gene3D G3DSA:2.60.200.30 152 262 1.3E-41 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VPUCM_RS03285 1078241dc5e82d3a5f482c987455f67e 294 SUPERFAMILY SSF111331 8 290 4.45E-94 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 Gene3D G3DSA:3.40.50.720 397 530 1.7E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 9.0E-67 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.596 T 22-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 PANTHER PTHR16254 1 556 9.1E-242 T 22-04-2016 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 SUPERFAMILY SSF51735 401 528 7.8E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 PANTHER PTHR16254:SF6 1 556 9.1E-242 T 22-04-2016 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 Pfam PF02254 TrkA-N domain 402 512 2.6E-22 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 1.8E-81 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.2E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.2E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.2E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS14555 79d048652df7c87d11e126fab671d2a3 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.2E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 PANTHER PTHR30115 1 112 5.8E-68 T 22-04-2016 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 83 103 3.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 2 17 3.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 23 41 3.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 52 75 3.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 SMART SM00938 4 105 7.9E-70 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 SUPERFAMILY SSF54913 1 112 1.94E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 Gene3D G3DSA:3.30.70.120 1 112 3.3E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 9.9E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS04725 943aaa215ef47f45b21e24f488989328 112 PIRSF PIRSF039144 1 112 2.1E-58 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 PIRSF PIRSF000130 1 488 1.1E-201 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 SUPERFAMILY SSF51412 217 477 7.85E-126 T 22-04-2016 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 SUPERFAMILY SSF51412 1 90 7.85E-126 T 22-04-2016 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 Pfam PF00571 CBS domain 95 140 4.6E-10 T 22-04-2016 IPR000644 CBS domain VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 Pfam PF00571 CBS domain 149 201 1.0E-4 T 22-04-2016 IPR000644 CBS domain VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 3.8E-197 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 PANTHER PTHR11911 1 281 5.3E-252 T 22-04-2016 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 PANTHER PTHR11911 299 485 5.3E-252 T 22-04-2016 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 SMART SM00116 96 144 1.3E-12 T 22-04-2016 IPR000644 CBS domain VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 SMART SM00116 158 206 5.6E-6 T 22-04-2016 IPR000644 CBS domain VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 Gene3D G3DSA:3.20.20.70 2 485 3.5E-199 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 SMART SM01240 7 473 0.0 T 22-04-2016 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 3.5E-162 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 SUPERFAMILY SSF54631 94 203 1.77E-26 T 22-04-2016 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 PANTHER PTHR11911:SF6 1 281 5.3E-252 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 PANTHER PTHR11911:SF6 299 485 5.3E-252 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VPUCM_RS03040 dbe0cc70966cb4c382f1f648b4103c55 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.218 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.2E-275 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 SMART SM00955 267 595 1.6E-186 T 22-04-2016 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 SMART SM00357 90 152 3.6E-14 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 PANTHER PTHR23355:SF9 5 815 0.0 T 22-04-2016 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 SUPERFAMILY SSF50249 71 154 1.46E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 4.9E-257 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 SUPERFAMILY SSF50249 145 244 2.1E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 6.7E-12 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 Pfam PF08206 Ribonuclease B OB domain 91 151 5.2E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 Pfam PF00575 S1 RNA binding domain 650 731 1.3E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 Gene3D G3DSA:2.40.50.140 652 736 2.3E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 PANTHER PTHR23355 5 815 0.0 T 22-04-2016 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 Pfam PF00773 RNB domain 267 594 8.6E-109 T 22-04-2016 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 SMART SM00316 650 733 6.9E-15 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.39 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 SUPERFAMILY SSF50249 651 742 2.31E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14645 bc47fed6637ead824a5e1af81e8bd806 835 SUPERFAMILY SSF50249 227 650 3.08E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS16030 82e9e9accf0408f8b54babd4f81fdf07 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.9E-60 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 VPUCM_RS16030 82e9e9accf0408f8b54babd4f81fdf07 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.302 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VPUCM_RS16030 82e9e9accf0408f8b54babd4f81fdf07 156 PANTHER PTHR33445 1 156 4.5E-48 T 22-04-2016 VPUCM_RS16030 82e9e9accf0408f8b54babd4f81fdf07 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 7.1E-37 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VPUCM_RS16030 82e9e9accf0408f8b54babd4f81fdf07 156 SUPERFAMILY SSF81573 63 121 6.67E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VPUCM_RS16030 82e9e9accf0408f8b54babd4f81fdf07 156 Gene3D G3DSA:1.20.5.620 63 122 3.2E-25 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 Gene3D G3DSA:3.40.50.2300 57 174 1.3E-24 T 22-04-2016 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 PANTHER PTHR30146:SF42 4 304 4.0E-165 T 22-04-2016 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 Gene3D G3DSA:3.40.50.2300 175 278 1.0E-36 T 22-04-2016 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 7.2E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 Pfam PF13377 Periplasmic binding protein-like domain 168 307 2.4E-16 T 22-04-2016 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 Gene3D G3DSA:1.10.260.40 6 56 7.3E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 3.2E-139 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 SMART SM00354 4 74 2.1E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 SUPERFAMILY SSF53822 63 307 7.07E-59 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS12565 80e115698fe83399e4edd05faa49d099 315 PANTHER PTHR30146 4 304 4.0E-165 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54980 402 479 5.4E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SMART SM00838 598 685 3.7E-47 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 2.6E-60 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.70.870 404 478 1.9E-32 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SMART SM00889 478 596 9.9E-59 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.0E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54980 601 690 1.76E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF00679 Elongation factor G C-terminus 598 684 1.3E-29 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.70.240 598 683 1.1E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF14492 Elongation Factor G, domain II 402 475 2.0E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 100.212 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF50447 262 400 2.05E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF52540 3 279 4.29E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.40.50.300 2 284 7.4E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115 252 280 0.0 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115 302 689 0.0 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115 3 174 0.0 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF03764 Elongation factor G, domain IV 477 595 2.5E-41 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.230.10 482 597 9.4E-43 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 690 1.7E-288 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115:SF154 252 280 0.0 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115:SF154 302 689 0.0 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PANTHER PTHR23115:SF154 3 174 0.0 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:2.40.30.10 305 403 1.2E-35 T 22-04-2016 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 9.9E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS04095 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54211 477 596 2.38E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS02035 4e20848e1483e0fc1422e19e71f582a5 119 SMART SM00905 6 116 7.0E-49 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS02035 4e20848e1483e0fc1422e19e71f582a5 119 SUPERFAMILY SSF55620 3 117 2.39E-37 T 22-04-2016 VPUCM_RS02035 4e20848e1483e0fc1422e19e71f582a5 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.1E-32 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS02035 4e20848e1483e0fc1422e19e71f582a5 119 Gene3D G3DSA:3.30.1130.10 2 117 5.4E-43 T 22-04-2016 VPUCM_RS02035 4e20848e1483e0fc1422e19e71f582a5 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 1.1E-36 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS02035 4e20848e1483e0fc1422e19e71f582a5 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 2.1E-30 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS02035 4e20848e1483e0fc1422e19e71f582a5 119 PANTHER PTHR20941 4 119 7.1E-34 T 22-04-2016 VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 9.6E-151 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.275.10 1 119 5.6E-49 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.40.30 391 446 4.5E-34 T 22-04-2016 VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 PANTHER PTHR11444:SF17 4 456 0.0 T 22-04-2016 VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.20.200.10 120 390 6.4E-89 T 22-04-2016 VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 PANTHER PTHR11444 4 456 0.0 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 3.6E-52 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 SUPERFAMILY SSF48557 4 448 1.12E-108 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VPUCM_RS06075 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF00206 Lyase 14 313 2.0E-74 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 PANTHER PTHR11496:SF57 1 360 7.2E-172 T 22-04-2016 VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 Gene3D G3DSA:1.20.1090.10 160 359 4.6E-68 T 22-04-2016 VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 SUPERFAMILY SSF56796 3 356 7.59E-92 T 22-04-2016 VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 PIRSF PIRSF000112 1 360 6.0E-95 T 22-04-2016 VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 Gene3D G3DSA:3.40.50.1970 2 158 1.4E-46 T 22-04-2016 VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 PANTHER PTHR11496 1 360 7.2E-172 T 22-04-2016 VPUCM_RS01925 e58e456916533dd495cdeac4536c316a 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 4.7E-69 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VPUCM_RS15440 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS15440 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 SUPERFAMILY SSF53335 19 196 3.63E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15440 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 PANTHER PTHR18895:SF60 3 196 6.8E-50 T 22-04-2016 VPUCM_RS15440 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 PANTHER PTHR18895 3 196 6.8E-50 T 22-04-2016 VPUCM_RS15440 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 1.4E-61 T 22-04-2016 VPUCM_RS15440 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 1.9E-60 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15440 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 PIRSF PIRSF004553 18 198 1.7E-55 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15440 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 Gene3D G3DSA:3.40.50.150 10 197 1.0E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.920 707 886 3.0E-74 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 6.3E-10 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 480 535 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 787 869 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 553 768 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 361 450 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624 73 292 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52922 702 886 1.6E-58 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 480 535 0.0 T 22-04-2016 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 787 869 0.0 T 22-04-2016 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 553 768 0.0 T 22-04-2016 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 361 450 0.0 T 22-04-2016 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PANTHER PTHR11624:SF67 73 292 0.0 T 22-04-2016 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 PIRSF PIRSF000156 1 887 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.970 473 705 2.2E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52518 56 469 1.45E-140 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52518 474 701 1.3E-98 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VPUCM_RS13010 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.970 55 469 1.2E-153 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS02270 ba836bb858ddff8bcf7baba18e76deb8 260 PANTHER PTHR35851 4 260 1.2E-64 T 22-04-2016 VPUCM_RS02270 ba836bb858ddff8bcf7baba18e76deb8 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.495 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 VPUCM_RS02270 ba836bb858ddff8bcf7baba18e76deb8 260 Pfam PF03799 Cell division protein FtsQ 127 239 2.3E-24 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB VPUCM_RS02270 ba836bb858ddff8bcf7baba18e76deb8 260 Pfam PF08478 POTRA domain, FtsQ-type 54 123 3.1E-17 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type VPUCM_RS02270 ba836bb858ddff8bcf7baba18e76deb8 260 PANTHER PTHR35851:SF1 4 260 1.2E-64 T 22-04-2016 VPUCM_RS07565 8f3a1aaf715653364311195b5cbb44c0 456 PANTHER PTHR11206:SF153 2 446 6.0E-215 T 22-04-2016 VPUCM_RS07565 8f3a1aaf715653364311195b5cbb44c0 456 PANTHER PTHR11206 2 446 6.0E-215 T 22-04-2016 VPUCM_RS07565 8f3a1aaf715653364311195b5cbb44c0 456 PIRSF PIRSF006603 5 452 7.1E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS07565 8f3a1aaf715653364311195b5cbb44c0 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 1.1E-125 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS07565 8f3a1aaf715653364311195b5cbb44c0 456 Pfam PF01554 MatE 243 404 1.2E-38 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS07565 8f3a1aaf715653364311195b5cbb44c0 456 Pfam PF01554 MatE 17 176 3.9E-37 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS11825 6606fee7747dc56b8e78442d24ea6ae1 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 3.0E-58 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VPUCM_RS11825 6606fee7747dc56b8e78442d24ea6ae1 252 Gene3D G3DSA:3.40.1390.30 1 107 4.9E-37 T 22-04-2016 VPUCM_RS11825 6606fee7747dc56b8e78442d24ea6ae1 252 Gene3D G3DSA:3.40.1390.30 108 219 5.1E-28 T 22-04-2016 VPUCM_RS11825 6606fee7747dc56b8e78442d24ea6ae1 252 SUPERFAMILY SSF102705 1 251 4.05E-82 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VPUCM_RS11825 6606fee7747dc56b8e78442d24ea6ae1 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 2.5E-68 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VPUCM_RS11825 6606fee7747dc56b8e78442d24ea6ae1 252 PANTHER PTHR13799 1 248 2.2E-76 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.4E-174 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 9.3E-11 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 Gene3D G3DSA:2.40.50.140 988 1076 3.0E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 PANTHER PTHR32294 2 1159 0.0 T 22-04-2016 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 SMART SM00481 7 74 3.4E-25 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 8.0E-26 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 SUPERFAMILY SSF89550 5 263 1.71E-12 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 Gene3D G3DSA:3.20.20.140 5 256 1.8E-19 T 22-04-2016 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 Pfam PF02811 PHP domain 8 172 5.6E-43 T 22-04-2016 IPR004013 PHP domain GO:0003824 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 PANTHER PTHR32294:SF0 2 1159 0.0 T 22-04-2016 VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 SUPERFAMILY SSF50249 976 1064 2.4E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS04705 84977087212d4efb591625bbb3358b3b 1159 Gene3D G3DSA:1.10.150.280 824 882 1.9E-6 T 22-04-2016 VPUCM_RS05640 b4f3ff3c1440fa5603632f1eb2018ee3 297 Pfam PF01933 Uncharacterised protein family UPF0052 9 286 6.2E-77 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VPUCM_RS05640 b4f3ff3c1440fa5603632f1eb2018ee3 297 PANTHER PTHR30135:SF3 8 294 4.4E-109 T 22-04-2016 VPUCM_RS05640 b4f3ff3c1440fa5603632f1eb2018ee3 297 SUPERFAMILY SSF142338 6 291 1.19E-84 T 22-04-2016 VPUCM_RS05640 b4f3ff3c1440fa5603632f1eb2018ee3 297 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.485 T 22-04-2016 IPR010119 Gluconeogenesis factor VPUCM_RS05640 b4f3ff3c1440fa5603632f1eb2018ee3 297 PANTHER PTHR30135 8 294 4.4E-109 T 22-04-2016 VPUCM_RS05640 b4f3ff3c1440fa5603632f1eb2018ee3 297 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 290 9.8E-103 T 22-04-2016 IPR010119 Gluconeogenesis factor VPUCM_RS05640 b4f3ff3c1440fa5603632f1eb2018ee3 297 Gene3D G3DSA:3.40.50.10680 79 293 3.2E-55 T 22-04-2016 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 PANTHER PTHR18919:SF69 3 391 5.2E-207 T 22-04-2016 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 PIRSF PIRSF000429 2 391 5.1E-133 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 SUPERFAMILY SSF53901 4 263 7.81E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 SUPERFAMILY SSF53901 266 390 3.3E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.678 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 2.3E-142 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 147 187 4.1E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 272 390 4.1E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 1.6E-83 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 188 271 3.8E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 8 130 3.8E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.0E-243 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.3E-49 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VPUCM_RS00130 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 PANTHER PTHR18919 3 391 5.2E-207 T 22-04-2016 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 SUPERFAMILY SSF53223 4 267 7.91E-110 T 22-04-2016 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 144 173 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 264 280 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 239 257 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 180 202 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 295 311 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 84 108 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 405 421 1.28E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.083 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 SUPERFAMILY SSF51735 268 559 2.33E-96 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 Gene3D G3DSA:3.40.50.10380 14 265 8.8E-116 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 Gene3D G3DSA:3.40.50.720 266 559 4.0E-110 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 6.4E-104 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 SMART SM00919 268 528 3.6E-134 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 SMART SM01274 78 258 1.5E-107 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PANTHER PTHR23406:SF25 1 562 0.0 T 22-04-2016 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PANTHER PTHR23406 1 562 0.0 T 22-04-2016 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 8.1E-78 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VPUCM_RS09735 be677324153b4f3063c077cf98d64db8 562 PIRSF PIRSF000106 2 560 6.2E-226 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS06060 22341cd66314e8fe556226ce8cfc6b87 170 Pfam PF11086 Protein of unknown function (DUF2878) 4 150 2.4E-30 T 22-04-2016 IPR021306 Protein of unknown function DUF2878 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 PANTHER PTHR21631:SF1 5 541 2.6E-279 T 22-04-2016 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 PIRSF PIRSF001363 10 542 9.1E-253 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 Gene3D G3DSA:1.20.1220.12 423 535 2.9E-37 T 22-04-2016 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 SUPERFAMILY SSF51645 8 541 1.57E-188 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 Gene3D G3DSA:3.20.20.360 81 422 2.3E-118 T 22-04-2016 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 32 541 1.9E-264 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 PANTHER PTHR21631 5 541 2.6E-279 T 22-04-2016 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 ProSitePatterns PS00510 Malate synthase signature. 275 290 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VPUCM_RS02885 58cb507b5b7039da5fb44d4c4eedee23 542 Pfam PF01274 Malate synthase 21 541 2.1E-200 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 102 190 7.1E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 PANTHER PTHR11831 1 206 4.9E-94 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 PANTHER PTHR11831:SF4 1 206 4.9E-94 T 22-04-2016 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 101 4.7E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 22-04-2016 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-30 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS01550 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS04760 73611874a22ed276c12643357325f7e2 240 PANTHER PTHR30231:SF0 10 238 9.9E-118 T 22-04-2016 VPUCM_RS04760 73611874a22ed276c12643357325f7e2 240 Gene3D G3DSA:3.30.420.10 7 191 8.9E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS04760 73611874a22ed276c12643357325f7e2 240 PANTHER PTHR30231 10 238 9.9E-118 T 22-04-2016 VPUCM_RS04760 73611874a22ed276c12643357325f7e2 240 SUPERFAMILY SSF53098 9 190 3.17E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS04760 73611874a22ed276c12643357325f7e2 240 Pfam PF00929 Exonuclease 13 180 5.5E-38 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS04760 73611874a22ed276c12643357325f7e2 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 5.1E-82 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04760 73611874a22ed276c12643357325f7e2 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 239 1.4E-97 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04760 73611874a22ed276c12643357325f7e2 240 SMART SM00479 11 189 4.4E-53 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 SMART SM00228 280 370 4.0E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 SUPERFAMILY SSF50494 67 276 6.08E-61 T 22-04-2016 IPR009003 Peptidase S1, PA clan VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 Pfam PF13365 Trypsin-like peptidase domain 102 241 1.8E-34 T 22-04-2016 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 Gene3D G3DSA:2.40.10.10 168 284 4.0E-46 T 22-04-2016 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 Gene3D G3DSA:2.30.42.10 297 378 2.9E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 Gene3D G3DSA:2.40.10.10 59 167 1.1E-29 T 22-04-2016 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 SUPERFAMILY SSF50156 238 371 6.97E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 Pfam PF13180 PDZ domain 280 379 2.6E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 PANTHER PTHR22939 46 381 4.2E-112 T 22-04-2016 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 6.3E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 PRINTS PR00834 HtrA/DegQ protease family signature 111 123 6.3E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 PRINTS PR00834 HtrA/DegQ protease family signature 132 152 6.3E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 6.3E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 PRINTS PR00834 HtrA/DegQ protease family signature 174 198 6.3E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 6.3E-48 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS03615 5d942cbef282a128b87e4573ec65c412 383 PANTHER PTHR22939:SF81 46 381 4.2E-112 T 22-04-2016 VPUCM_RS01805 3d40c4d79ece29728975fe8d17e7e05b 332 Gene3D G3DSA:3.40.718.10 3 331 2.6E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VPUCM_RS01805 3d40c4d79ece29728975fe8d17e7e05b 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 8.1E-105 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VPUCM_RS01805 3d40c4d79ece29728975fe8d17e7e05b 332 PANTHER PTHR30004 3 331 2.1E-204 T 22-04-2016 VPUCM_RS01805 3d40c4d79ece29728975fe8d17e7e05b 332 SUPERFAMILY SSF53659 6 330 3.52E-109 T 22-04-2016 VPUCM_RS01805 3d40c4d79ece29728975fe8d17e7e05b 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 1.8E-125 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VPUCM_RS01805 3d40c4d79ece29728975fe8d17e7e05b 332 PANTHER PTHR30004:SF5 3 331 2.1E-204 T 22-04-2016 VPUCM_RS01805 3d40c4d79ece29728975fe8d17e7e05b 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 328 35.57 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VPUCM_RS10310 bfdae22abd3eb848a53e7533f0caa514 141 Gene3D G3DSA:3.40.630.30 10 129 1.8E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10310 bfdae22abd3eb848a53e7533f0caa514 141 PANTHER PTHR13355 17 122 9.6E-19 T 22-04-2016 VPUCM_RS10310 bfdae22abd3eb848a53e7533f0caa514 141 Pfam PF00583 Acetyltransferase (GNAT) family 52 122 1.6E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS10310 bfdae22abd3eb848a53e7533f0caa514 141 PANTHER PTHR13355:SF5 17 122 9.6E-19 T 22-04-2016 VPUCM_RS10310 bfdae22abd3eb848a53e7533f0caa514 141 SUPERFAMILY SSF55729 13 131 1.25E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 4.6E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 SMART SM00382 214 358 4.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 Gene3D G3DSA:3.40.50.300 191 366 3.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 Gene3D G3DSA:1.10.8.60 368 416 5.1E-15 T 22-04-2016 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 SUPERFAMILY SSF55781 7 163 6.32E-18 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 Gene3D G3DSA:1.10.10.60 417 507 3.6E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 PANTHER PTHR32071:SF35 133 507 3.4E-145 T 22-04-2016 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 Gene3D G3DSA:3.30.450.40 9 174 6.2E-15 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 Pfam PF01590 GAF domain 23 158 1.0E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 PANTHER PTHR32071 133 507 3.4E-145 T 22-04-2016 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 SMART SM00065 21 170 1.6E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 SUPERFAMILY SSF46689 459 507 9.41E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 488 9.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 508 9.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 SUPERFAMILY SSF52540 193 437 4.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 Pfam PF00158 Sigma-54 interaction domain 195 361 1.6E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS10070 8151d3b728e7a3a90308e7bd497a63f0 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS01545 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01545 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site VPUCM_RS01545 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 7 129 1.6E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01545 a7cce014599a851da5a362b0f6ba5fe0 129 PANTHER PTHR11759 11 129 5.5E-71 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01545 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.753 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01545 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 1.8E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01545 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 22-04-2016 VPUCM_RS01545 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS12905 c1e4469cb07e701cfb0310c37d4e59f7 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 31.023 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VPUCM_RS12905 c1e4469cb07e701cfb0310c37d4e59f7 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 8.0E-65 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VPUCM_RS12905 c1e4469cb07e701cfb0310c37d4e59f7 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 6.4E-42 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VPUCM_RS12905 c1e4469cb07e701cfb0310c37d4e59f7 122 PIRSF PIRSF006287 1 122 2.0E-49 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VPUCM_RS06150 4bc19316a9ad11d33ecaffff70f0fc7d 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.4E-114 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VPUCM_RS06150 4bc19316a9ad11d33ecaffff70f0fc7d 257 PANTHER PTHR21235:SF2 1 257 1.9E-119 T 22-04-2016 VPUCM_RS06150 4bc19316a9ad11d33ecaffff70f0fc7d 257 Gene3D G3DSA:3.20.20.70 4 257 2.1E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS06150 4bc19316a9ad11d33ecaffff70f0fc7d 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.931 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VPUCM_RS06150 4bc19316a9ad11d33ecaffff70f0fc7d 257 SUPERFAMILY SSF51366 1 256 1.88E-74 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VPUCM_RS06150 4bc19316a9ad11d33ecaffff70f0fc7d 257 PANTHER PTHR21235 1 257 1.9E-119 T 22-04-2016 VPUCM_RS06150 4bc19316a9ad11d33ecaffff70f0fc7d 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.9E-79 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VPUCM_RS14690 8771d4fba3dfdc5339ee9fa8f4d9097a 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 22-04-2016 IPR010920 LSM domain VPUCM_RS14690 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VPUCM_RS14690 8771d4fba3dfdc5339ee9fa8f4d9097a 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VPUCM_RS14690 8771d4fba3dfdc5339ee9fa8f4d9097a 87 PANTHER PTHR34772 1 87 1.2E-41 T 22-04-2016 VPUCM_RS14690 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Gene3D G3DSA:2.30.30.100 1 71 3.3E-38 T 22-04-2016 VPUCM_RS14690 8771d4fba3dfdc5339ee9fa8f4d9097a 87 PANTHER PTHR34772:SF1 1 87 1.2E-41 T 22-04-2016 VPUCM_RS13340 c2c93ca3c83b26bf1f16020d8e621d53 320 PANTHER PTHR38782:SF1 2 317 3.1E-115 T 22-04-2016 VPUCM_RS13340 c2c93ca3c83b26bf1f16020d8e621d53 320 Pfam PF03888 MucB/RseB N-terminal domain 26 195 3.1E-57 T 22-04-2016 IPR033434 MucB/RseB, N-terminal VPUCM_RS13340 c2c93ca3c83b26bf1f16020d8e621d53 320 Gene3D G3DSA:2.50.20.10 125 184 2.3E-8 T 22-04-2016 VPUCM_RS13340 c2c93ca3c83b26bf1f16020d8e621d53 320 PANTHER PTHR38782 2 317 3.1E-115 T 22-04-2016 VPUCM_RS13340 c2c93ca3c83b26bf1f16020d8e621d53 320 PIRSF PIRSF005427 1 318 1.2E-82 T 22-04-2016 IPR005588 MucB/RseB VPUCM_RS13340 c2c93ca3c83b26bf1f16020d8e621d53 320 Pfam PF17188 MucB/RseB C-terminal domain 218 311 7.0E-28 T 22-04-2016 IPR033436 MucB/RseB, C-terminal VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 SUPERFAMILY SSF46557 3 78 1.44E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 Gene3D G3DSA:1.10.287.180 3 75 1.2E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 PANTHER PTHR30437 2 163 2.1E-82 T 22-04-2016 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 PIRSF PIRSF006092 2 158 4.9E-43 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.637 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 PANTHER PTHR30437:SF6 2 163 2.1E-82 T 22-04-2016 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 1.6E-71 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.016 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.3E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.0E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 SUPERFAMILY SSF54534 80 156 1.02E-18 T 22-04-2016 VPUCM_RS00760 760ad6ea0e7f7e22e908885f9d16627e 163 Gene3D G3DSA:3.10.50.30 76 156 1.0E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.362 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 Gene3D G3DSA:3.40.1770.10 14 146 1.9E-163 T 22-04-2016 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 Gene3D G3DSA:3.40.1770.10 362 557 1.9E-163 T 22-04-2016 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 6.8E-292 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 PIRSF PIRSF001423 1 563 6.8E-295 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 Gene3D G3DSA:3.40.50.10730 147 351 3.1E-90 T 22-04-2016 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 SUPERFAMILY SSF111326 11 557 1.07E-259 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 Pfam PF01175 Urocanase 17 549 1.0E-259 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 PANTHER PTHR12216 10 557 0.0 T 22-04-2016 VPUCM_RS09655 08a530a0f422fe5a87508db86e88b02a 565 PANTHER PTHR12216:SF3 10 557 0.0 T 22-04-2016 VPUCM_RS12830 5edda75e1d2ef7cc165886609aa8f9f4 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 9.6E-76 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VPUCM_RS12830 5edda75e1d2ef7cc165886609aa8f9f4 560 PANTHER PTHR30290:SF31 45 543 1.5E-158 T 22-04-2016 VPUCM_RS12830 5edda75e1d2ef7cc165886609aa8f9f4 560 PIRSF PIRSF002741 5 542 3.2E-68 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VPUCM_RS12830 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.90.76.10 46 196 4.4E-40 T 22-04-2016 VPUCM_RS12830 5edda75e1d2ef7cc165886609aa8f9f4 560 SUPERFAMILY SSF53850 42 544 2.95E-107 T 22-04-2016 VPUCM_RS12830 5edda75e1d2ef7cc165886609aa8f9f4 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site VPUCM_RS12830 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.10.105.10 273 513 3.1E-51 T 22-04-2016 VPUCM_RS12830 5edda75e1d2ef7cc165886609aa8f9f4 560 PANTHER PTHR30290 45 543 1.5E-158 T 22-04-2016 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 SUPERFAMILY SSF55307 204 320 7.33E-43 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 SUPERFAMILY SSF52490 13 208 2.88E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 Pfam PF12327 FtsZ family, C-terminal domain 222 316 3.2E-36 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 6.0E-40 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 396 38.16 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 SMART SM00864 13 205 3.8E-112 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 SMART SM00865 207 325 2.9E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 Gene3D G3DSA:3.40.50.1440 14 214 4.0E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 331 2.4E-136 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 PANTHER PTHR30314:SF3 1 407 7.2E-203 T 22-04-2016 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 PANTHER PTHR30314 1 407 7.2E-203 T 22-04-2016 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.1E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.1E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.1E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.1E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VPUCM_RS02280 88d934ae13ce14cfe46a2eba9a78587f 409 Gene3D G3DSA:3.30.1330.20 215 321 2.6E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VPUCM_RS07855 23010a44ba71d554f606b9ee126c3b4a 165 Gene3D G3DSA:3.30.70.20 45 82 1.2E-11 T 22-04-2016 VPUCM_RS07855 23010a44ba71d554f606b9ee126c3b4a 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS07855 23010a44ba71d554f606b9ee126c3b4a 165 Gene3D G3DSA:3.30.70.20 83 124 1.3E-6 T 22-04-2016 VPUCM_RS07855 23010a44ba71d554f606b9ee126c3b4a 165 Gene3D G3DSA:3.30.70.20 125 161 5.1E-11 T 22-04-2016 VPUCM_RS07855 23010a44ba71d554f606b9ee126c3b4a 165 Pfam PF12838 4Fe-4S dicluster domain 117 156 3.0E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS07855 23010a44ba71d554f606b9ee126c3b4a 165 Pfam PF13237 4Fe-4S dicluster domain 46 88 7.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS07855 23010a44ba71d554f606b9ee126c3b4a 165 SUPERFAMILY SSF54862 41 162 6.16E-19 T 22-04-2016 VPUCM_RS13200 8ad1e9d83da7a31c2500484af61d6e5c 395 PANTHER PTHR21499:SF27 1 390 4.9E-126 T 22-04-2016 VPUCM_RS13200 8ad1e9d83da7a31c2500484af61d6e5c 395 PANTHER PTHR21499 1 390 4.9E-126 T 22-04-2016 VPUCM_RS13200 8ad1e9d83da7a31c2500484af61d6e5c 395 SUPERFAMILY SSF53633 6 241 4.84E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS13200 8ad1e9d83da7a31c2500484af61d6e5c 395 Gene3D G3DSA:3.40.1160.10 4 245 1.1E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS13200 8ad1e9d83da7a31c2500484af61d6e5c 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS13200 8ad1e9d83da7a31c2500484af61d6e5c 395 Pfam PF00696 Amino acid kinase family 5 231 3.7E-52 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS13200 8ad1e9d83da7a31c2500484af61d6e5c 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 2.4E-76 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.079 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 PANTHER PTHR10458:SF10 1 168 1.0E-106 T 22-04-2016 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 PIRSF PIRSF004749 1 172 4.1E-57 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 SUPERFAMILY SSF56420 3 165 4.19E-63 T 22-04-2016 IPR023635 Peptide deformylase VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 3.5E-62 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 Pfam PF01327 Polypeptide deformylase 4 152 9.7E-51 T 22-04-2016 IPR023635 Peptide deformylase VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 120 149 7.5E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 89 100 7.5E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 101 119 7.5E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 33 62 7.5E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 PANTHER PTHR10458 1 168 1.0E-106 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VPUCM_RS15880 55ca7751ba0e80ffaa089a3b44850af4 172 Gene3D G3DSA:3.90.45.10 5 169 2.3E-64 T 22-04-2016 IPR023635 Peptide deformylase VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.1E-101 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.231 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 Gene3D G3DSA:3.20.20.70 1 267 5.6E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 PANTHER PTHR10314:SF4 1 51 1.1E-27 T 22-04-2016 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 PANTHER PTHR10314:SF4 74 154 1.1E-27 T 22-04-2016 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 PANTHER PTHR10314 1 51 1.1E-27 T 22-04-2016 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 PANTHER PTHR10314 74 154 1.1E-27 T 22-04-2016 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 SUPERFAMILY SSF51366 1 266 5.56E-92 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VPUCM_RS06330 dc8cf1a3f90f23e8b74fbb06c81c1635 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 4.6E-103 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF100934 534 607 3.84E-6 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.30.30 53 106 1.2E-28 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PANTHER PTHR19375:SF173 2 636 0.0 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF53067 186 381 1.23E-65 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.238 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:2.60.34.10 389 530 1.3E-70 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PANTHER PTHR19375 2 636 0.0 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.5E-285 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 195 228 5.9E-32 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 318 359 5.9E-32 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF53067 1 182 1.17E-64 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 118 194 1.4E-63 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 4 52 1.4E-63 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Pfam PF00012 Hsp70 protein 4 601 1.4E-261 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 3.2E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.90.640.10 229 314 9.5E-32 T 22-04-2016 VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:1.20.1270.10 531 600 7.8E-26 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VPUCM_RS03300 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF100920 383 539 3.79E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 171 205 3.1E-5 T 22-04-2016 VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 112 126 3.1E-5 T 22-04-2016 VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 PANTHER PTHR30163:SF2 20 321 1.9E-133 T 22-04-2016 VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 321 2.5E-111 T 22-04-2016 IPR011970 Lytic murein transglycosylase VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 Pfam PF13406 Transglycosylase SLT domain 24 319 9.2E-111 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 PANTHER PTHR30163 20 321 1.9E-133 T 22-04-2016 IPR011757 Lytic transglycosylase MltB VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 SUPERFAMILY SSF53955 12 321 3.02E-101 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 68 111 1.6E-62 T 22-04-2016 VPUCM_RS04915 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 206 322 1.6E-62 T 22-04-2016 VPUCM_RS02990 3dd41dc475f59963926b59cb7cb26e68 375 PANTHER PTHR30544:SF5 1 375 2.9E-193 T 22-04-2016 VPUCM_RS02990 3dd41dc475f59963926b59cb7cb26e68 375 Gene3D G3DSA:3.20.20.70 106 329 1.2E-15 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS02990 3dd41dc475f59963926b59cb7cb26e68 375 SUPERFAMILY SSF102114 103 312 3.27E-13 T 22-04-2016 VPUCM_RS02990 3dd41dc475f59963926b59cb7cb26e68 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 2.8E-161 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02990 3dd41dc475f59963926b59cb7cb26e68 375 Pfam PF04055 Radical SAM superfamily 109 283 1.7E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS02990 3dd41dc475f59963926b59cb7cb26e68 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.98 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02990 3dd41dc475f59963926b59cb7cb26e68 375 PIRSF PIRSF006004 3 366 7.4E-145 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02990 3dd41dc475f59963926b59cb7cb26e68 375 PANTHER PTHR30544 1 375 2.9E-193 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 Gene3D G3DSA:2.40.170.20 153 624 2.3E-71 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 148 7.4E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 607 624 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 624 34.231 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 Pfam PF00593 TonB dependent receptor 407 623 1.7E-25 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 22-04-2016 IPR010916 TonB box, conserved site VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 Gene3D G3DSA:2.170.130.10 31 152 2.5E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 PANTHER PTHR30069:SF10 7 587 3.8E-120 T 22-04-2016 VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 SUPERFAMILY SSF56935 29 624 7.33E-102 T 22-04-2016 VPUCM_RS15350 4a99ce831297c65735a4b4604a39c9f2 624 PANTHER PTHR30069 7 587 3.8E-120 T 22-04-2016 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 SMART SM00283 190 365 4.8E-5 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 PANTHER PTHR32089:SF44 98 364 1.8E-84 T 22-04-2016 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 PANTHER PTHR32089:SF44 32 67 1.8E-84 T 22-04-2016 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 316 2.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 99 119 2.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 347 2.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 SUPERFAMILY SSF58104 144 364 1.7E-49 T 22-04-2016 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 Gene3D G3DSA:1.10.287.950 206 364 6.1E-42 T 22-04-2016 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 PANTHER PTHR32089 98 364 1.8E-84 T 22-04-2016 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 PANTHER PTHR32089 32 67 1.8E-84 T 22-04-2016 VPUCM_RS23290 e85929460e54a1d2439f5d028fd56fe3 365 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 254 363 4.0E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 PANTHER PTHR30258:SF2 14 550 1.5E-171 T 22-04-2016 VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 PANTHER PTHR30258 14 550 1.5E-171 T 22-04-2016 VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 SUPERFAMILY SSF160246 6 134 1.52E-14 T 22-04-2016 VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 37 138 9.3E-9 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 367 381 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 SUPERFAMILY SSF52540 159 549 1.78E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 Pfam PF00437 Type II/IV secretion system protein 180 439 5.1E-74 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 Gene3D G3DSA:3.40.50.300 276 550 2.6E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 SMART SM00382 300 423 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS01145 fbd6a7d01fab1d4ae4d8af04873d9523 551 Gene3D G3DSA:3.30.450.90 150 271 1.5E-41 T 22-04-2016 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 PANTHER PTHR21631 3 436 4.4E-173 T 22-04-2016 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 SUPERFAMILY SSF51621 6 436 4.93E-153 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 Gene3D G3DSA:3.20.20.60 7 419 4.1E-169 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 Pfam PF00463 Isocitrate lyase family 258 436 8.9E-53 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 Pfam PF00463 Isocitrate lyase family 14 257 5.8E-62 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 PIRSF PIRSF001362 1 436 1.9E-224 T 22-04-2016 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 2.9E-90 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VPUCM_RS02890 ad20daf92603b9769e14f1f9b58621c1 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 1.3E-113 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 VPUCM_RS12690 350d914ac001488152d8411f74f699e9 155 Pfam PF01029 NusB family 11 149 1.9E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VPUCM_RS12690 350d914ac001488152d8411f74f699e9 155 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 23.044 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VPUCM_RS12690 350d914ac001488152d8411f74f699e9 155 PANTHER PTHR11078 5 154 1.1E-46 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VPUCM_RS12690 350d914ac001488152d8411f74f699e9 155 SUPERFAMILY SSF48013 7 153 3.79E-39 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VPUCM_RS12690 350d914ac001488152d8411f74f699e9 155 Gene3D G3DSA:1.10.940.10 6 154 3.8E-43 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VPUCM_RS12690 350d914ac001488152d8411f74f699e9 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 5.4E-43 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.546 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 Gene3D G3DSA:3.40.50.620 236 306 1.8E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PIRSF PIRSF000099 1 427 2.4E-171 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PANTHER PTHR21256:SF14 1 430 1.4E-292 T 22-04-2016 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 6.9E-168 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 Pfam PF00815 Histidinol dehydrogenase 27 424 3.4E-172 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.1E-102 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 SUPERFAMILY SSF53720 4 424 2.55E-92 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 Gene3D G3DSA:3.40.50.1980 28 235 7.0E-83 T 22-04-2016 VPUCM_RS06125 c0c442a766e41b8ba758131959b3975d 431 PANTHER PTHR21256 1 430 1.4E-292 T 22-04-2016 VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 Gene3D G3DSA:3.40.30.10 170 241 2.2E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 Pfam PF00462 Glutaredoxin 173 231 4.2E-18 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 PANTHER PTHR10430 1 168 2.3E-105 T 22-04-2016 VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 Gene3D G3DSA:3.40.30.10 4 163 9.9E-64 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 Pfam PF08534 Redoxin 5 160 3.7E-33 T 22-04-2016 IPR013740 Redoxin GO:0016491 VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 PANTHER PTHR10430:SF19 1 168 2.3E-105 T 22-04-2016 VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 2.1E-42 T 22-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VPUCM_RS14405 60400285d751b1b5d11ebf93ce571d29 242 SUPERFAMILY SSF52833 3 241 8.09E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 SUPERFAMILY SSF53850 89 296 2.82E-39 T 22-04-2016 VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 Pfam PF03466 LysR substrate binding domain 89 290 2.5E-43 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 SUPERFAMILY SSF46785 1 111 5.28E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:1.10.10.10 1 83 4.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 PANTHER PTHR30346:SF15 1 297 2.6E-128 T 22-04-2016 VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:3.40.190.10 90 175 1.5E-18 T 22-04-2016 VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:3.40.190.10 176 266 3.8E-31 T 22-04-2016 VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 PANTHER PTHR30346 1 297 2.6E-128 T 22-04-2016 VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS14400 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 Gene3D G3DSA:3.40.50.720 2 160 1.1E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 PANTHER PTHR11645 1 270 4.6E-109 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 PANTHER PTHR11645:SF0 1 270 4.6E-109 T 22-04-2016 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 9.3E-26 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.369 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 SUPERFAMILY SSF48179 163 270 2.38E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.4E-73 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 PIRSF PIRSF000193 3 270 1.8E-75 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 Gene3D G3DSA:1.10.3730.10 162 268 3.0E-30 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 3.2E-30 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VPUCM_RS13530 c93642714902870db0ab1e10cfab118c 272 SUPERFAMILY SSF51735 4 160 7.9E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Gene3D G3DSA:1.10.287.610 3 68 2.1E-28 T 22-04-2016 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SUPERFAMILY SSF52113 595 670 1.74E-18 T 22-04-2016 IPR001357 BRCT domain VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 4.6E-135 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 3.9E-24 T 22-04-2016 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 PANTHER PTHR23389 1 533 3.9E-208 T 22-04-2016 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Gene3D G3DSA:3.30.470.30 120 253 6.9E-52 T 22-04-2016 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SMART SM00278 545 564 720.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SMART SM00278 481 500 6.7 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SMART SM00278 447 466 95.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 PIRSF PIRSF001604 1 670 1.4E-256 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Gene3D G3DSA:1.10.150.20 436 504 1.0E-25 T 22-04-2016 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SUPERFAMILY SSF56091 4 317 1.76E-125 T 22-04-2016 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 3.2E-12 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SUPERFAMILY SSF47781 404 584 2.63E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Gene3D G3DSA:2.40.50.140 321 392 9.7E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 1.5E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SMART SM00532 4 449 1.4E-280 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 54.213 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Gene3D G3DSA:3.40.50.10190 593 669 1.6E-24 T 22-04-2016 IPR001357 BRCT domain VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 3.1E-14 T 22-04-2016 IPR001357 BRCT domain VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 PANTHER PTHR23389:SF9 1 533 3.9E-208 T 22-04-2016 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 3.5E-266 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SMART SM00292 595 670 5.3E-11 T 22-04-2016 IPR001357 BRCT domain VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 SUPERFAMILY SSF50249 319 400 1.56E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Pfam PF14520 Helix-hairpin-helix domain 447 503 8.0E-6 T 22-04-2016 VPUCM_RS12045 1a8cdf6f7ac2642c0f289fbd7b1a90b1 670 Gene3D G3DSA:1.10.150.20 507 585 3.7E-31 T 22-04-2016 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PANTHER PTHR11946 288 907 0.0 T 22-04-2016 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PANTHER PTHR11946 237 262 0.0 T 22-04-2016 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PANTHER PTHR11946 6 215 0.0 T 22-04-2016 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 844 5.3E-27 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 SUPERFAMILY SSF52374 408 652 2.23E-137 T 22-04-2016 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 SUPERFAMILY SSF52374 4 202 2.23E-137 T 22-04-2016 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 9.6E-294 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 Gene3D G3DSA:1.10.730.10 647 792 7.4E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 Gene3D G3DSA:3.90.740.10 207 394 1.7E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.498 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 SUPERFAMILY SSF47323 657 933 5.98E-75 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 SUPERFAMILY SSF50677 203 408 1.15E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 8.8E-229 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 Gene3D G3DSA:3.40.50.620 17 205 4.9E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 Gene3D G3DSA:3.40.50.620 408 641 4.9E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 Pfam PF06827 Zinc finger found in FPG and IleRS 903 930 5.1E-6 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PANTHER PTHR11946:SF11 288 907 0.0 T 22-04-2016 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PANTHER PTHR11946:SF11 237 262 0.0 T 22-04-2016 VPUCM_RS02615 c2d06630a93f9fe84dc05351264c1f02 942 PANTHER PTHR11946:SF11 6 215 0.0 T 22-04-2016 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 PANTHER PTHR11911 1 422 3.3E-103 T 22-04-2016 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 SMART SM00924 36 139 3.0E-37 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 Gene3D G3DSA:1.10.357.20 279 451 6.0E-48 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 SUPERFAMILY SSF54631 138 278 7.58E-27 T 22-04-2016 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 Pfam PF01769 Divalent cation transporter 323 445 4.1E-22 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 Pfam PF03448 MgtE intracellular N domain 36 137 5.4E-27 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 Gene3D G3DSA:1.25.60.10 9 130 5.5E-29 T 22-04-2016 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 SUPERFAMILY SSF158791 12 136 1.31E-30 T 22-04-2016 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 3.2E-87 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 SMART SM00116 212 258 0.0014 T 22-04-2016 IPR000644 CBS domain VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 Gene3D G3DSA:3.10.580.10 131 262 1.2E-15 T 22-04-2016 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 Pfam PF00571 CBS domain 140 195 7.1E-4 T 22-04-2016 IPR000644 CBS domain VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 Pfam PF00571 CBS domain 214 257 7.3E-5 T 22-04-2016 IPR000644 CBS domain VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 PANTHER PTHR11911:SF99 1 422 3.3E-103 T 22-04-2016 VPUCM_RS14000 0cf7a320ca21dac543186ce520ff6c8d 451 SUPERFAMILY SSF161093 280 450 3.53E-44 T 22-04-2016 VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 Gene3D G3DSA:3.40.190.10 38 121 8.9E-22 T 22-04-2016 VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 Gene3D G3DSA:3.40.190.10 234 261 8.9E-22 T 22-04-2016 VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 SUPERFAMILY SSF53955 297 457 2.72E-37 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 Gene3D G3DSA:1.10.530.10 262 452 1.2E-44 T 22-04-2016 VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 Pfam PF01464 Transglycosylase SLT domain 302 415 8.2E-22 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 SMART SM00062 43 280 7.5E-18 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 266 8.2E-27 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 PANTHER PTHR21666 281 450 6.7E-36 T 22-04-2016 VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 SUPERFAMILY SSF53850 38 276 6.73E-37 T 22-04-2016 VPUCM_RS02730 886e4c1fa5024391ebfb526fd8fc068d 493 Gene3D G3DSA:3.40.190.10 122 224 5.7E-10 T 22-04-2016 VPUCM_RS04385 024193485cfb84299740dbe17df980bd 269 PANTHER PTHR10953 201 266 1.2E-139 T 22-04-2016 VPUCM_RS04385 024193485cfb84299740dbe17df980bd 269 PANTHER PTHR10953 13 168 1.2E-139 T 22-04-2016 VPUCM_RS04385 024193485cfb84299740dbe17df980bd 269 Pfam PF00899 ThiF family 24 198 1.1E-37 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VPUCM_RS04385 024193485cfb84299740dbe17df980bd 269 PANTHER PTHR10953:SF159 201 266 1.2E-139 T 22-04-2016 VPUCM_RS04385 024193485cfb84299740dbe17df980bd 269 PANTHER PTHR10953:SF159 13 168 1.2E-139 T 22-04-2016 VPUCM_RS04385 024193485cfb84299740dbe17df980bd 269 Gene3D G3DSA:3.40.50.720 5 267 4.9E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04385 024193485cfb84299740dbe17df980bd 269 SUPERFAMILY SSF69572 9 267 7.46E-64 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 2.1E-107 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 Gene3D G3DSA:1.20.970.10 3 68 1.5E-27 T 22-04-2016 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 4.6E-130 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 PANTHER PTHR11922:SF5 17 32 1.2E-107 T 22-04-2016 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 PANTHER PTHR11922:SF5 67 328 1.2E-107 T 22-04-2016 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 6.3E-17 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 PANTHER PTHR11922 17 32 1.2E-107 T 22-04-2016 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 PANTHER PTHR11922 67 328 1.2E-107 T 22-04-2016 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 40.299 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 SUPERFAMILY SSF47648 2 67 2.62E-19 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 Gene3D G3DSA:3.40.1030.10 71 329 2.7E-104 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VPUCM_RS06345 52769c3bb97f55333e7da589fd9d14c3 332 SUPERFAMILY SSF52418 70 329 6.15E-96 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VPUCM_RS01235 d21ca145e492399ef51fca76b6c6fe03 181 SUPERFAMILY SSF51182 1 179 9.71E-78 T 22-04-2016 IPR011051 RmlC-like cupin domain VPUCM_RS01235 d21ca145e492399ef51fca76b6c6fe03 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 178 8.0E-74 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VPUCM_RS01235 d21ca145e492399ef51fca76b6c6fe03 181 PANTHER PTHR21047:SF2 1 178 8.4E-80 T 22-04-2016 VPUCM_RS01235 d21ca145e492399ef51fca76b6c6fe03 181 PANTHER PTHR21047 1 178 8.4E-80 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VPUCM_RS01235 d21ca145e492399ef51fca76b6c6fe03 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 178 4.8E-84 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VPUCM_RS01235 d21ca145e492399ef51fca76b6c6fe03 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 3.7E-74 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 VPUCM_RS01235 d21ca145e492399ef51fca76b6c6fe03 181 Gene3D G3DSA:2.60.120.10 1 179 1.7E-82 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS00410 d868e2c4104b7fdf3457c06410874bc3 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.364 T 22-04-2016 IPR019598 Universal stress protein B VPUCM_RS00410 d868e2c4104b7fdf3457c06410874bc3 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 4.1E-51 T 22-04-2016 IPR019598 Universal stress protein B VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 PANTHER PTHR30001 1 824 0.0 T 22-04-2016 VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 PANTHER PTHR30001:SF1 1 824 0.0 T 22-04-2016 VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 Gene3D G3DSA:2.40.50.140 31 124 4.7E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 Hamap MF_00970 Ribonuclease E [rne]. 1 1002 35.827 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 Pfam PF10150 Ribonuclease E/G family 121 390 7.0E-95 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 SUPERFAMILY SSF50249 40 124 3.97E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 SMART SM00316 37 119 1.1E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.2E-171 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VPUCM_RS10605 a40a8d172243718fe154fb395689359d 1015 Pfam PF00575 S1 RNA binding domain 37 118 4.9E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Gene3D G3DSA:3.30.70.100 88 159 2.0E-16 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 SUPERFAMILY SSF55008 85 162 1.7E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 785 3.8E-121 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 SUPERFAMILY SSF81653 318 402 1.06E-22 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 SUPERFAMILY SSF56784 500 519 1.54E-47 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 SUPERFAMILY SSF56784 554 781 1.54E-47 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 4.6E-24 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 4.6E-24 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 4.6E-24 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 4.6E-24 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 4.6E-24 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PANTHER PTHR24093:SF50 74 783 1.0E-188 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 SUPERFAMILY SSF81665 253 306 7.45E-12 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 SUPERFAMILY SSF81665 726 766 7.45E-12 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 SUPERFAMILY SSF81665 404 495 7.45E-12 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Pfam PF00122 E1-E2 ATPase 278 492 3.2E-56 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 2.0E-27 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Gene3D G3DSA:3.40.1110.10 505 562 1.9E-4 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Gene3D G3DSA:3.40.50.1000 475 504 6.5E-45 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Gene3D G3DSA:3.40.50.1000 602 750 6.5E-45 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Pfam PF00403 Heavy-metal-associated domain 93 154 1.9E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 5.2E-75 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PANTHER PTHR24093 74 783 1.0E-188 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 3.8E-152 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Gene3D G3DSA:2.70.150.10 253 402 3.6E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 7.9E-159 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00943 Copper-transporting ATPase signature 230 249 1.3E-5 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.3E-5 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 1.3E-5 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.3E-5 T 22-04-2016 VPUCM_RS08155 d81952e838851b2e6fd08f4b5cfb7c33 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 5.3E-29 T 22-04-2016 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 2 78 1.8E-32 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.0E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 PANTHER PTHR10031 8 77 1.8E-20 T 22-04-2016 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.624 T 22-04-2016 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VPUCM_RS16035 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VPUCM_RS06205 6eb77c2f8a82601b118b8a8aed07d3e2 339 Pfam PF13515 Fusaric acid resistance protein-like 182 313 9.0E-7 T 22-04-2016 VPUCM_RS06205 6eb77c2f8a82601b118b8a8aed07d3e2 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 140 2.0E-47 T 22-04-2016 IPR022604 Protein of unknown function DUF2955 VPUCM_RS06205 6eb77c2f8a82601b118b8a8aed07d3e2 339 PIRSF PIRSF029594 1 330 3.2E-95 T 22-04-2016 IPR016926 Uncharacterised conserved protein UCP029594 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54211 484 604 5.31E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 1.4E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PANTHER PTHR23115 308 697 0.0 T 22-04-2016 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.3E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.70.870 411 485 1.7E-38 T 22-04-2016 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PANTHER PTHR23115:SF66 308 697 0.0 T 22-04-2016 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 SMART SM00838 605 693 6.1E-57 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.40.50.300 6 293 4.2E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.230.10 489 604 1.9E-52 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 SMART SM00889 485 603 4.6E-76 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.2E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54980 608 695 3.36E-30 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.1E-66 T 22-04-2016 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Pfam PF00679 Elongation factor G C-terminus 605 692 4.2E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.574 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF52540 6 288 5.66E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.1E-33 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF50447 271 409 5.52E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.70.240 605 691 2.7E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14490 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:2.40.30.10 310 410 2.2E-39 T 22-04-2016 VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 Gene3D G3DSA:3.30.1110.10 45 95 5.6E-5 T 22-04-2016 VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584 17 293 6.0E-243 T 22-04-2016 VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584 332 376 6.0E-243 T 22-04-2016 VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584 393 434 6.0E-243 T 22-04-2016 VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 SUPERFAMILY SSF53613 338 417 1.77E-44 T 22-04-2016 IPR029056 Ribokinase-like VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 SUPERFAMILY SSF53613 31 305 1.77E-44 T 22-04-2016 IPR029056 Ribokinase-like VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 Gene3D G3DSA:3.40.1190.20 337 434 7.8E-45 T 22-04-2016 IPR029056 Ribokinase-like VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 Gene3D G3DSA:3.40.1190.20 96 298 7.8E-45 T 22-04-2016 IPR029056 Ribokinase-like VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584:SF202 17 293 6.0E-243 T 22-04-2016 VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584:SF202 332 376 6.0E-243 T 22-04-2016 VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 PANTHER PTHR10584:SF202 393 434 6.0E-243 T 22-04-2016 VPUCM_RS06095 00d178314ba1d6efd52a463da030d502 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 1.1E-11 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB VPUCM_RS01755 82f9f637410cbef4eb34363a3d6aa293 323 PANTHER PTHR12001 5 323 3.7E-123 T 22-04-2016 IPR017446 Polyprenyl synthetase-related VPUCM_RS01755 82f9f637410cbef4eb34363a3d6aa293 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VPUCM_RS01755 82f9f637410cbef4eb34363a3d6aa293 323 Gene3D G3DSA:1.10.600.10 3 322 4.6E-100 T 22-04-2016 IPR008949 Isoprenoid synthase domain VPUCM_RS01755 82f9f637410cbef4eb34363a3d6aa293 323 PANTHER PTHR12001:SF47 5 323 3.7E-123 T 22-04-2016 VPUCM_RS01755 82f9f637410cbef4eb34363a3d6aa293 323 SUPERFAMILY SSF48576 4 322 1.28E-98 T 22-04-2016 IPR008949 Isoprenoid synthase domain VPUCM_RS01755 82f9f637410cbef4eb34363a3d6aa293 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VPUCM_RS01755 82f9f637410cbef4eb34363a3d6aa293 323 Pfam PF00348 Polyprenyl synthetase 32 272 3.1E-71 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VPUCM_RS09885 821841c42628bbcd4ec3f37a4f003803 361 PANTHER PTHR38591 1 361 3.9E-86 T 22-04-2016 VPUCM_RS09885 821841c42628bbcd4ec3f37a4f003803 361 Pfam PF17186 Lipocalin-like domain 240 361 1.6E-33 T 22-04-2016 IPR033451 AttH, lipocalin-like domain VPUCM_RS09885 821841c42628bbcd4ec3f37a4f003803 361 Gene3D G3DSA:2.40.370.10 240 361 2.6E-35 T 22-04-2016 IPR023374 AttH-like domain VPUCM_RS09885 821841c42628bbcd4ec3f37a4f003803 361 Gene3D G3DSA:2.40.370.10 54 236 8.8E-59 T 22-04-2016 IPR023374 AttH-like domain VPUCM_RS09885 821841c42628bbcd4ec3f37a4f003803 361 Pfam PF07143 CrtC N-terminal lipocalin domain 66 235 2.0E-44 T 22-04-2016 IPR010791 AttH domain VPUCM_RS09885 821841c42628bbcd4ec3f37a4f003803 361 SUPERFAMILY SSF159245 43 361 2.88E-91 T 22-04-2016 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 Pfam PF04542 Sigma-70 region 2 25 92 3.0E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 Pfam PF08281 Sigma-70, region 4 134 181 4.1E-18 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 3.0E-103 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 SUPERFAMILY SSF88659 124 184 1.63E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 PANTHER PTHR30173 1 187 3.3E-56 T 22-04-2016 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.6E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 PANTHER PTHR30173:SF1 1 187 3.3E-56 T 22-04-2016 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 SUPERFAMILY SSF88946 2 107 1.51E-32 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 Gene3D G3DSA:1.10.1740.10 2 111 2.2E-38 T 22-04-2016 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13350 54c7548b912f44e018accf7c699ef4cf 192 Gene3D G3DSA:1.10.10.10 124 188 1.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00655 7ad16bedf9ae74d4ab0faf37c4388474 128 SUPERFAMILY SSF55174 8 105 4.84E-31 T 22-04-2016 VPUCM_RS00655 7ad16bedf9ae74d4ab0faf37c4388474 128 PANTHER PTHR11079 1 75 2.7E-29 T 22-04-2016 VPUCM_RS00655 7ad16bedf9ae74d4ab0faf37c4388474 128 Gene3D G3DSA:3.10.290.10 7 103 1.7E-38 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS00655 7ad16bedf9ae74d4ab0faf37c4388474 128 PIRSF PIRSF016821 5 128 2.0E-42 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VPUCM_RS00655 7ad16bedf9ae74d4ab0faf37c4388474 128 PANTHER PTHR11079:SF70 1 75 2.7E-29 T 22-04-2016 VPUCM_RS00655 7ad16bedf9ae74d4ab0faf37c4388474 128 SMART SM00363 8 71 1.4E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS00655 7ad16bedf9ae74d4ab0faf37c4388474 128 Pfam PF01479 S4 domain 8 54 3.9E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 58 63 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 SUPERFAMILY SSF50494 44 316 5.89E-42 T 22-04-2016 IPR009003 Peptidase S1, PA clan VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 SMART SM00020 20 311 5.4E-26 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 Gene3D G3DSA:2.40.10.10 142 316 3.9E-26 T 22-04-2016 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 260 271 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 Gene3D G3DSA:2.40.10.10 45 141 1.2E-19 T 22-04-2016 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 9.2E-16 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 48 63 9.2E-16 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 259 271 9.2E-16 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 360 380 1.7E-4 T 22-04-2016 IPR020008 GlyGly-CTERM domain VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 PANTHER PTHR24256 176 319 7.7E-33 T 22-04-2016 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 PANTHER PTHR24256 34 114 7.7E-33 T 22-04-2016 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 PANTHER PTHR24256 131 160 7.7E-33 T 22-04-2016 VPUCM_RS02900 a500da4429ddf42c036461aae0dc7d9f 382 Pfam PF00089 Trypsin 44 311 3.0E-27 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 PANTHER PTHR24423 13 30 8.7E-125 T 22-04-2016 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 PANTHER PTHR24423 141 566 8.7E-125 T 22-04-2016 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 Gene3D G3DSA:3.40.50.2300 446 565 5.0E-37 T 22-04-2016 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 SUPERFAMILY SSF55874 258 425 3.67E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 SMART SM00448 449 560 5.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 SMART SM00387 316 427 6.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 Gene3D G3DSA:3.30.565.10 274 430 8.6E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 Gene3D G3DSA:1.10.287.130 196 265 9.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.2E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 Pfam PF00072 Response regulator receiver domain 451 558 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 SUPERFAMILY SSF52172 448 565 8.82E-34 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 SUPERFAMILY SSF47384 193 269 1.39E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 1.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06720 9e01df2f8dd7c50be328123e461a07b5 566 SMART SM00388 204 269 8.3E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 Pfam PF00932 Lamin Tail Domain 21 130 7.4E-15 T 22-04-2016 IPR001322 Lamin Tail Domain VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 963 983 0.0033 T 22-04-2016 IPR020008 GlyGly-CTERM domain VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 SUPERFAMILY SSF56219 473 844 4.75E-35 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 478 836 4.8E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 PANTHER PTHR33607 751 912 2.2E-157 T 22-04-2016 VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 PANTHER PTHR33607 7 484 2.2E-157 T 22-04-2016 VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 PANTHER PTHR33607 505 725 2.2E-157 T 22-04-2016 VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 Gene3D G3DSA:3.60.10.10 752 841 2.6E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 Gene3D G3DSA:3.60.10.10 475 719 2.6E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 PANTHER PTHR33607:SF1 751 912 2.2E-157 T 22-04-2016 VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 PANTHER PTHR33607:SF1 7 484 2.2E-157 T 22-04-2016 VPUCM_RS14620 e5bb25f0b87625dd59a7fc7e1f0f5524 984 PANTHER PTHR33607:SF1 505 725 2.2E-157 T 22-04-2016 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 PIRSF PIRSF000538 4 503 1.4E-177 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.3E-86 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.326 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.1E-226 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Gene3D G3DSA:3.30.420.40 2 254 2.0E-105 T 22-04-2016 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Gene3D G3DSA:3.30.420.40 255 498 4.6E-102 T 22-04-2016 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 PANTHER PTHR10196:SF9 1 505 1.0E-259 T 22-04-2016 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 3.0E-60 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 PANTHER PTHR10196 1 505 1.0E-259 T 22-04-2016 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 SUPERFAMILY SSF53067 5 256 3.05E-94 T 22-04-2016 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 SUPERFAMILY SSF53067 255 497 5.18E-85 T 22-04-2016 VPUCM_RS04295 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.552 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 SUPERFAMILY SSF109635 8 107 1.7E-36 T 22-04-2016 VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 PANTHER PTHR33823 5 146 1.8E-67 T 22-04-2016 VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 PANTHER PTHR33823:SF2 5 146 1.8E-67 T 22-04-2016 VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 5.8E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 22-04-2016 VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 7.7E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VPUCM_RS12935 263ae69592a8e0cbfd5f39542ed8fb74 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VPUCM_RS12075 5cef2448e92803417a3f4397cd74a868 169 SUPERFAMILY SSF51261 18 166 3.31E-55 T 22-04-2016 IPR011055 Duplicated hybrid motif VPUCM_RS12075 5cef2448e92803417a3f4397cd74a868 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.6E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS12075 5cef2448e92803417a3f4397cd74a868 169 PANTHER PTHR30175 1 118 2.1E-55 T 22-04-2016 VPUCM_RS12075 5cef2448e92803417a3f4397cd74a868 169 Gene3D G3DSA:2.70.70.10 17 166 7.7E-60 T 22-04-2016 VPUCM_RS12075 5cef2448e92803417a3f4397cd74a868 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS12075 5cef2448e92803417a3f4397cd74a868 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.8E-50 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.1E-44 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 PANTHER PTHR32071 19 98 4.2E-29 T 22-04-2016 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 27 98 4.1E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.9E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS15085 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 PANTHER PTHR10314:SF110 3 322 2.5E-161 T 22-04-2016 VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 SUPERFAMILY SSF53686 3 313 1.31E-95 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 PANTHER PTHR10314 3 322 2.5E-161 T 22-04-2016 VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 6.8E-142 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.2E-134 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 Gene3D G3DSA:3.40.50.1100 36 132 1.4E-37 T 22-04-2016 VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.4E-67 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS12060 7efbc76cfe412725899959eff3acc2e2 322 Gene3D G3DSA:3.40.50.1100 133 312 4.0E-74 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 PANTHER PTHR32282:SF5 768 834 7.1E-271 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 SUPERFAMILY SSF53955 43 256 9.0E-78 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 PANTHER PTHR32282 667 751 7.1E-271 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 PANTHER PTHR32282 768 834 7.1E-271 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 PANTHER PTHR32282 2 311 7.1E-271 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 Gene3D G3DSA:1.10.3810.10 55 231 1.3E-73 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 786 3.8E-168 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 Pfam PF17092 Penicillin-binding protein OB-like domain 317 434 5.7E-33 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 PANTHER PTHR32282 431 622 7.1E-271 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 Gene3D G3DSA:3.40.710.10 432 621 4.5E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 Gene3D G3DSA:3.40.710.10 668 835 4.5E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 Gene3D G3DSA:3.40.710.10 232 314 4.5E-128 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 Gene3D G3DSA:2.40.50.140 348 431 3.3E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 Pfam PF00912 Transglycosylase 55 229 3.6E-63 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 SUPERFAMILY SSF56601 432 620 6.69E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 SUPERFAMILY SSF56601 211 233 6.69E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 SUPERFAMILY SSF56601 667 836 6.69E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 SUPERFAMILY SSF56601 262 314 6.69E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 743 1.1E-26 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 PANTHER PTHR32282:SF5 431 622 7.1E-271 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 PANTHER PTHR32282:SF5 667 751 7.1E-271 T 22-04-2016 VPUCM_RS14395 ee506a0a64a34762298d50097c7af7fa 856 PANTHER PTHR32282:SF5 2 311 7.1E-271 T 22-04-2016 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 PANTHER PTHR10996 1 370 1.3E-242 T 22-04-2016 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF55021 338 409 6.49E-18 T 22-04-2016 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF51735 108 295 7.81E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 9.4E-53 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.40.50.720 8 119 1.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF52283 7 136 1.4E-49 T 22-04-2016 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.30.70.260 324 409 1.2E-30 T 22-04-2016 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 PANTHER PTHR10996:SF18 1 370 1.3E-242 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.2E-38 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VPUCM_RS13410 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.40.50.720 120 297 1.5E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 PANTHER PTHR19139:SF100 7 252 1.4E-87 T 22-04-2016 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 5.2E-68 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 3.2E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 Gene3D G3DSA:1.20.1080.10 5 253 6.2E-83 T 22-04-2016 IPR023271 Aquaporin-like VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 Pfam PF00230 Major intrinsic protein 6 252 5.4E-63 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 SUPERFAMILY SSF81338 9 254 2.75E-74 T 22-04-2016 IPR023271 Aquaporin-like VPUCM_RS04300 80b9c8aeffdd265e64f80b34a03d7766 284 PANTHER PTHR19139 7 252 1.4E-87 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 SUPERFAMILY SSF53187 179 496 5.34E-125 T 22-04-2016 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 22-04-2016 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 Gene3D G3DSA:3.40.220.10 1 161 5.4E-67 T 22-04-2016 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 PANTHER PTHR11963:SF13 7 502 4.0E-262 T 22-04-2016 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 9.3E-119 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.2E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 Gene3D G3DSA:3.40.630.10 171 499 3.0E-139 T 22-04-2016 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 PANTHER PTHR11963 7 502 4.0E-262 T 22-04-2016 VPUCM_RS13805 59d7b9f21bc93df80b6b9c5185e389ab 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.914 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 SUPERFAMILY SSF56784 3 158 4.33E-40 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 3.0E-28 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 SUPERFAMILY SSF54211 169 253 2.78E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 PANTHER PTHR23133:SF2 165 357 9.4E-174 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 PANTHER PTHR23133 165 357 9.4E-174 T 22-04-2016 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 7.7E-79 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 Gene3D G3DSA:3.30.230.40 169 255 5.8E-38 T 22-04-2016 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.678 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 PANTHER PTHR23133 12 99 9.4E-174 T 22-04-2016 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 PANTHER PTHR23133:SF2 12 99 9.4E-174 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 2.7E-65 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 Gene3D G3DSA:3.40.50.1000 3 160 6.3E-43 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 56.071 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.0E-48 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 Gene3D G3DSA:3.30.230.40 259 357 3.3E-32 T 22-04-2016 VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 SUPERFAMILY SSF54211 254 344 3.04E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS06135 a1962ca7f9e2027ae6876050b21ba109 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 5.0E-6 T 22-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 3.4E-30 T 22-04-2016 IPR010518 Flagellar regulatory FleQ VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF00158 Sigma-54 interaction domain 137 304 1.3E-72 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 9.9E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:1.10.8.60 310 384 2.1E-21 T 22-04-2016 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:3.40.50.300 134 309 4.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 SMART SM00382 157 301 5.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 PANTHER PTHR32071:SF36 1 387 1.5E-230 T 22-04-2016 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 PANTHER PTHR32071:SF36 412 488 1.5E-230 T 22-04-2016 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF52172 6 182 5.09E-5 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:1.10.10.60 428 486 3.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 PANTHER PTHR32071 1 387 1.5E-230 T 22-04-2016 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 PANTHER PTHR32071 412 488 1.5E-230 T 22-04-2016 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF52540 137 378 2.07E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF46689 349 392 7.17E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS11620 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF46689 434 486 7.17E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.844 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 PANTHER PTHR10210:SF41 2 314 2.6E-187 T 22-04-2016 VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.9E-31 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.9E-125 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 SUPERFAMILY SSF53271 69 306 2.56E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 Gene3D G3DSA:3.40.50.2020 2 159 1.7E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.5E-50 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 PANTHER PTHR10210 2 314 2.6E-187 T 22-04-2016 VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 Gene3D G3DSA:3.40.50.2020 160 286 1.8E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS12315 a415e3867f6b170de669f53bd90f2aa5 314 SMART SM01400 4 121 2.0E-77 T 22-04-2016 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 PANTHER PTHR11136 8 420 7.4E-124 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 Gene3D G3DSA:3.90.190.20 288 417 1.8E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 Gene3D G3DSA:3.40.1190.10 13 286 5.6E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 2.6E-5 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 Pfam PF08245 Mur ligase middle domain 54 192 1.1E-6 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 5.0E-104 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 SUPERFAMILY SSF53623 15 285 2.09E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 PIRSF PIRSF001563 6 420 4.3E-104 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 SUPERFAMILY SSF53244 288 416 8.7E-32 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS11305 3d528d267d534d0af5cee586cb9128b6 420 PANTHER PTHR11136:SF0 8 420 7.4E-124 T 22-04-2016 VPUCM_RS02010 f33d8a72f030d4bff9547a71dd1e8537 147 SUPERFAMILY SSF89095 1 146 2.46E-45 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 VPUCM_RS02010 f33d8a72f030d4bff9547a71dd1e8537 147 PANTHER PTHR28055:SF1 1 147 5.9E-54 T 22-04-2016 VPUCM_RS02010 f33d8a72f030d4bff9547a71dd1e8537 147 Gene3D G3DSA:1.10.10.410 91 147 2.1E-25 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VPUCM_RS02010 f33d8a72f030d4bff9547a71dd1e8537 147 Gene3D G3DSA:1.10.1510.10 1 90 2.7E-33 T 22-04-2016 VPUCM_RS02010 f33d8a72f030d4bff9547a71dd1e8537 147 Pfam PF09424 Yqey-like protein 5 146 3.8E-58 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial VPUCM_RS02010 f33d8a72f030d4bff9547a71dd1e8537 147 PANTHER PTHR28055 1 147 5.9E-54 T 22-04-2016 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.57 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 PANTHER PTHR21256 13 211 7.5E-114 T 22-04-2016 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 PANTHER PTHR21256:SF16 13 211 7.5E-114 T 22-04-2016 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 SUPERFAMILY SSF141734 14 124 9.81E-46 T 22-04-2016 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 4.0E-24 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 8.9E-32 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 7.8E-18 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.835 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 SUPERFAMILY SSF101386 123 210 2.43E-25 T 22-04-2016 VPUCM_RS06155 928882980f5ab1e88ba07e4124eb3a5b 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.7E-31 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 PANTHER PTHR10072:SF37 1 99 1.3E-86 T 22-04-2016 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 PANTHER PTHR10072:SF37 149 191 1.3E-86 T 22-04-2016 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.291 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 Pfam PF01106 NifU-like domain 113 180 9.5E-19 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 Gene3D G3DSA:2.60.300.12 3 99 8.0E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 1.0E-27 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 PANTHER PTHR10072 149 191 1.3E-86 T 22-04-2016 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 100 8.1E-13 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 2.3E-95 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 PANTHER PTHR10072 1 99 1.3E-86 T 22-04-2016 VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 SUPERFAMILY SSF89360 3 99 4.71E-22 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS00730 ea27fb9f683cc1d154213bcdc72ff52d 194 SUPERFAMILY SSF117916 97 187 3.27E-22 T 22-04-2016 VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 PANTHER PTHR21666:SF190 467 635 8.8E-77 T 22-04-2016 VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 Pfam PF01464 Transglycosylase SLT domain 489 600 1.2E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 Gene3D G3DSA:1.25.20.10 33 393 3.2E-108 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 Gene3D G3DSA:1.10.530.10 479 635 6.0E-49 T 22-04-2016 VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 SUPERFAMILY SSF48435 33 481 2.48E-128 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 PANTHER PTHR21666 467 635 8.8E-77 T 22-04-2016 VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 SUPERFAMILY SSF53955 484 643 9.76E-48 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 Gene3D G3DSA:1.10.1240.20 410 476 4.9E-27 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VPUCM_RS02705 b08b7f6c2e9425eb8f90522da368ddd8 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 9.7E-24 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 196 5.2E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 PIRSF PIRSF000349 1 202 7.2E-81 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.05E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.05E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.05E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.05E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.05E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 Gene3D G3DSA:1.10.287.990 20 85 3.6E-22 T 22-04-2016 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 PANTHER PTHR11404 1 201 1.7E-96 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 SUPERFAMILY SSF46609 1 86 3.01E-30 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 SUPERFAMILY SSF54719 88 200 6.68E-44 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS14970 7e45e782815e50ccac1fef1b9030bda4 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 8.8E-28 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.3E-9 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 7.8E-6 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 SUPERFAMILY SSF56712 3 615 1.31E-198 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 3.6E-36 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Pfam PF01751 Toprim domain 5 149 7.2E-32 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 728 53.832 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PANTHER PTHR11390 75 781 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 SUPERFAMILY SSF57783 814 870 1.16E-21 T 22-04-2016 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:2.20.25.10 813 870 2.5E-29 T 22-04-2016 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:2.70.20.10 220 341 4.7E-34 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:2.70.20.10 345 479 1.2E-32 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:1.10.460.10 171 218 3.3E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:1.10.460.10 480 602 3.3E-59 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 SMART SM00437 279 533 1.4E-117 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 SUPERFAMILY SSF57783 749 812 2.72E-19 T 22-04-2016 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:3.40.50.140 1 170 2.6E-56 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 SMART SM00436 140 228 2.5E-47 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 3.9E-248 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 5.5E-19 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 3.8E-11 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Pfam PF01131 DNA topoisomerase 164 571 3.8E-127 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 SMART SM00493 3 139 1.3E-32 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PANTHER PTHR11390:SF27 75 781 0.0 T 22-04-2016 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:3.30.65.10 603 629 1.9E-12 T 22-04-2016 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:3.30.65.10 712 748 2.3E-9 T 22-04-2016 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 Gene3D G3DSA:3.30.65.10 749 811 3.9E-26 T 22-04-2016 VPUCM_RS10855 09f878638b70377db4fabcb5311f5b71 876 SUPERFAMILY SSF57783 705 747 2.04E-5 T 22-04-2016 VPUCM_RS11685 2e76fe79c777efd6005bd9d2a7a63553 116 Pfam PF03960 ArsC family 6 112 5.1E-19 T 22-04-2016 IPR006660 Arsenate reductase-like VPUCM_RS11685 2e76fe79c777efd6005bd9d2a7a63553 116 PANTHER PTHR30041 1 115 9.5E-47 T 22-04-2016 VPUCM_RS11685 2e76fe79c777efd6005bd9d2a7a63553 116 SUPERFAMILY SSF52833 2 114 1.27E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11685 2e76fe79c777efd6005bd9d2a7a63553 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.6E-31 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR VPUCM_RS11685 2e76fe79c777efd6005bd9d2a7a63553 116 Gene3D G3DSA:3.40.30.10 2 115 5.9E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11685 2e76fe79c777efd6005bd9d2a7a63553 116 PANTHER PTHR30041:SF3 1 115 9.5E-47 T 22-04-2016 VPUCM_RS02185 35f1214898f8f23a3376a9da8f6b471a 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS02185 35f1214898f8f23a3376a9da8f6b471a 211 SUPERFAMILY SSF47616 82 208 1.34E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VPUCM_RS02185 35f1214898f8f23a3376a9da8f6b471a 211 Gene3D G3DSA:1.20.1050.10 101 208 6.9E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VPUCM_RS02185 35f1214898f8f23a3376a9da8f6b471a 211 PANTHER PTHR11260 9 210 4.8E-120 T 22-04-2016 VPUCM_RS02185 35f1214898f8f23a3376a9da8f6b471a 211 PANTHER PTHR11260:SF44 9 210 4.8E-120 T 22-04-2016 VPUCM_RS02185 35f1214898f8f23a3376a9da8f6b471a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VPUCM_RS02185 35f1214898f8f23a3376a9da8f6b471a 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.1E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal VPUCM_RS02185 35f1214898f8f23a3376a9da8f6b471a 211 Gene3D G3DSA:3.40.30.10 7 100 6.4E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 Pfam PF14821 Threonine synthase N terminus 8 78 3.5E-8 T 22-04-2016 IPR029144 Threonine synthase, N-terminal VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 SUPERFAMILY SSF53686 1 424 3.54E-132 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 TIGRFAM TIGR00260 thrC: threonine synthase 51 388 2.2E-114 T 22-04-2016 IPR004450 Threonine synthase-like VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 Gene3D G3DSA:3.90.1380.10 1 82 2.7E-17 T 22-04-2016 IPR029144 Threonine synthase, N-terminal VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 Gene3D G3DSA:3.40.50.1100 104 192 8.1E-13 T 22-04-2016 VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 366 4.0E-24 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 PANTHER PTHR10314 25 426 8.6E-137 T 22-04-2016 VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 PANTHER PTHR10314:SF1 25 426 8.6E-137 T 22-04-2016 VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 Gene3D G3DSA:3.40.50.1100 193 315 3.7E-53 T 22-04-2016 VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 Gene3D G3DSA:3.40.50.1100 322 399 1.1E-15 T 22-04-2016 VPUCM_RS02445 6abaf3391870758cf23ee5d92b2d2c7c 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 2.5E-215 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 SUPERFAMILY SSF51905 1 365 1.73E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.50.50.60 139 326 2.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PANTHER PTHR22912 1 451 1.4E-251 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.1E-29 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.1E-29 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.1E-29 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.1E-29 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-29 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PANTHER PTHR22912:SF106 1 451 1.4E-251 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.30.390.30 327 451 2.1E-41 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PIRSF PIRSF000350 1 445 9.9E-83 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 SUPERFAMILY SSF55424 337 451 4.3E-35 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.50.50.60 2 138 8.5E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.2E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 6.6E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.6E-64 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.6E-64 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.6E-64 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.6E-64 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 7.6E-64 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.6E-64 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 7.6E-64 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 7.6E-64 T 22-04-2016 VPUCM_RS00360 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.6E-64 T 22-04-2016 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50249 70 128 1.93E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.30.30.30 1 65 1.3E-28 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 PIRSF PIRSF005901 2 188 2.5E-63 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.40.50.140 130 187 1.3E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.2E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.455 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 SMART SM00841 131 186 3.0E-31 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 PANTHER PTHR30053 1 188 1.9E-89 T 22-04-2016 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 SMART SM01185 69 123 9.4E-26 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50249 130 187 4.63E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 4.3E-24 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.2E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.40.50.140 66 129 1.2E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.1E-77 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VPUCM_RS14900 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 22-04-2016 IPR008991 Translation protein SH3-like domain VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 24 271 1.2E-122 T 22-04-2016 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00119|UniPathway: UPA00606 VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 SUPERFAMILY SSF53167 12 272 6.54E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 Gene3D G3DSA:3.40.50.1580 9 271 3.0E-92 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 PANTHER PTHR11904 1 271 8.0E-113 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 PIRSF PIRSF000477 2 273 9.4E-104 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 270 1.9E-99 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 76 117 - T 22-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 PANTHER PTHR11904:SF9 1 271 8.0E-113 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 VPUCM_RS00350 9841d99be2d913c64d678390a4d45aba 274 Pfam PF01048 Phosphorylase superfamily 24 270 2.7E-43 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 PANTHER PTHR11921:SF29 4 234 7.3E-127 T 22-04-2016 VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 SUPERFAMILY SSF54292 1 104 3.07E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 2.7E-10 T 22-04-2016 VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 Gene3D G3DSA:1.10.1060.10 105 234 1.0E-45 T 22-04-2016 VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 Gene3D G3DSA:3.10.20.30 1 104 1.7E-36 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 PANTHER PTHR11921 4 234 7.3E-127 T 22-04-2016 VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 8.2E-30 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VPUCM_RS11800 c8c9e7215234c235a9c4811a2c2bca47 236 SUPERFAMILY SSF46548 105 233 5.76E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS06485 0978cbfc48bd1de3fdabefababc8c190 235 Gene3D G3DSA:3.40.50.150 23 218 1.6E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06485 0978cbfc48bd1de3fdabefababc8c190 235 PANTHER PTHR10108 4 233 4.8E-152 T 22-04-2016 VPUCM_RS06485 0978cbfc48bd1de3fdabefababc8c190 235 Pfam PF13489 Methyltransferase domain 52 201 1.0E-26 T 22-04-2016 VPUCM_RS06485 0978cbfc48bd1de3fdabefababc8c190 235 PANTHER PTHR10108:SF910 4 233 4.8E-152 T 22-04-2016 VPUCM_RS06485 0978cbfc48bd1de3fdabefababc8c190 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 1.9E-87 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VPUCM_RS06485 0978cbfc48bd1de3fdabefababc8c190 235 SUPERFAMILY SSF53335 15 232 1.16E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06485 0978cbfc48bd1de3fdabefababc8c190 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.595 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 SUPERFAMILY SSF46977 425 525 2.88E-32 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 Gene3D G3DSA:3.50.50.60 349 409 1.5E-103 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 Gene3D G3DSA:3.50.50.60 2 243 1.5E-103 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 SUPERFAMILY SSF51905 5 255 1.09E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 SUPERFAMILY SSF51905 356 447 1.09E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 Gene3D G3DSA:1.20.58.100 421 522 1.1E-34 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 Gene3D G3DSA:3.90.700.10 244 348 1.1E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VPUCM_RS13355 d41be667722fc29202427d64978de388 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.4E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 3.6E-210 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 PANTHER PTHR11632 5 535 1.8E-270 T 22-04-2016 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 PANTHER PTHR11632:SF27 5 535 1.8E-270 T 22-04-2016 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 SUPERFAMILY SSF56425 238 353 3.59E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VPUCM_RS13355 d41be667722fc29202427d64978de388 540 Pfam PF00890 FAD binding domain 10 392 2.5E-101 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VPUCM_RS13355 d41be667722fc29202427d64978de388 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.8E-9 T 22-04-2016 VPUCM_RS13355 d41be667722fc29202427d64978de388 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.8E-9 T 22-04-2016 VPUCM_RS03330 a5978ba81aa49d61455f92a0ba541698 137 Pfam PF13633 Prokaryotic N-terminal methylation site 5 31 2.2E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS03330 a5978ba81aa49d61455f92a0ba541698 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.7E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 Pfam PF00206 Lyase 13 337 7.3E-92 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 5.0E-31 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 5.0E-31 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 5.0E-31 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 5.0E-31 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.8E-5 T 22-04-2016 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.8E-5 T 22-04-2016 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.8E-5 T 22-04-2016 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 Gene3D G3DSA:1.10.275.10 4 133 2.8E-52 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 Gene3D G3DSA:1.10.40.30 414 459 1.2E-20 T 22-04-2016 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PANTHER PTHR11444:SF22 1 454 9.6E-281 T 22-04-2016 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 Gene3D G3DSA:1.20.200.10 134 413 9.6E-83 T 22-04-2016 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 PANTHER PTHR11444 1 454 9.6E-281 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 SUPERFAMILY SSF48557 5 455 4.87E-134 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 Pfam PF10415 Fumarase C C-terminus 403 455 4.8E-19 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS15030 5847fa31eeda53ac96e67db0f46ad79b 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.448 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Gene3D G3DSA:3.20.20.20 365 636 3.4E-114 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 SUPERFAMILY SSF82282 8 400 6.15E-120 T 22-04-2016 IPR003726 Homocysteine-binding domain VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 SUPERFAMILY SSF52242 744 895 3.66E-46 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Gene3D G3DSA:3.20.20.330 4 364 1.3E-127 T 22-04-2016 IPR003726 Homocysteine-binding domain VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 PANTHER PTHR21091:SF111 5 403 6.0E-172 T 22-04-2016 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Gene3D G3DSA:3.40.50.280 745 895 4.3E-66 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Gene3D G3DSA:1.10.1240.10 653 737 6.2E-39 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 SUPERFAMILY SSF47644 654 740 7.32E-29 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 SUPERFAMILY SSF56507 903 1225 7.85E-133 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 PIRSF PIRSF000381 3 1197 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 8.2E-93 T 22-04-2016 IPR003726 Homocysteine-binding domain VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 SUPERFAMILY SSF51717 357 631 3.14E-88 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Pfam PF02310 B12 binding domain 749 841 6.4E-18 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Gene3D G3DSA:3.10.196.10 959 1225 1.3E-108 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.7E-59 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Pfam PF02607 B12 binding domain 660 734 3.0E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 PANTHER PTHR21091 5 403 6.0E-172 T 22-04-2016 VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 SMART SM01018 658 741 6.6E-45 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VPUCM_RS14205 b6c41f17ed22bb29faeaaa4816034cfc 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 6.7E-123 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VPUCM_RS00985 ea37be245fee19b61febf7a599e45091 264 SUPERFAMILY SSF53448 3 145 1.69E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS00985 ea37be245fee19b61febf7a599e45091 264 PANTHER PTHR10859 4 107 1.8E-22 T 22-04-2016 VPUCM_RS00985 ea37be245fee19b61febf7a599e45091 264 Gene3D G3DSA:3.90.550.10 4 118 1.0E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS00985 ea37be245fee19b61febf7a599e45091 264 Pfam PF00535 Glycosyl transferase family 2 10 141 8.2E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 Gene3D G3DSA:3.20.20.70 105 314 2.7E-19 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 Pfam PF04055 Radical SAM superfamily 117 263 2.8E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.1E-159 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 SUPERFAMILY SSF102114 102 323 1.19E-29 T 22-04-2016 VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 PANTHER PTHR30538 13 337 3.7E-138 T 22-04-2016 VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 Pfam PF13353 4Fe-4S single cluster domain 114 183 1.7E-7 T 22-04-2016 VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 PANTHER PTHR30538:SF1 13 337 3.7E-138 T 22-04-2016 VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 2.2E-131 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VPUCM_RS14905 33484b66d3baded4e6f23b48773aa66c 340 PIRSF PIRSF004911 3 340 1.1E-119 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VPUCM_RS21100 1fae5a81b99a4e34407e4ad3841c7b6e 29 PANTHER PTHR18968:SF114 1 29 1.2E-12 T 22-04-2016 VPUCM_RS21100 1fae5a81b99a4e34407e4ad3841c7b6e 29 PANTHER PTHR18968 1 29 1.2E-12 T 22-04-2016 VPUCM_RS21100 1fae5a81b99a4e34407e4ad3841c7b6e 29 Gene3D G3DSA:3.40.50.970 1 29 1.0E-8 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS21100 1fae5a81b99a4e34407e4ad3841c7b6e 29 SUPERFAMILY SSF52518 1 29 1.12E-5 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS21100 1fae5a81b99a4e34407e4ad3841c7b6e 29 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 28 1.6E-6 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 Gene3D G3DSA:3.30.460.10 178 324 1.9E-46 T 22-04-2016 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 SMART SM00471 41 153 4.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 SMART SM00954 235 345 6.9E-59 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 SUPERFAMILY SSF55021 633 703 3.08E-7 T 22-04-2016 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 22-04-2016 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 SUPERFAMILY SSF81301 180 393 2.13E-59 T 22-04-2016 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 Pfam PF02824 TGS domain 389 447 3.2E-19 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 PANTHER PTHR21262 3 706 0.0 T 22-04-2016 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 1.7E-270 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 Gene3D G3DSA:3.30.70.260 631 697 1.0E-8 T 22-04-2016 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 Pfam PF13328 HD domain 28 175 5.7E-54 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 Pfam PF13291 ACT domain 627 703 5.0E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 PANTHER PTHR21262:SF0 3 706 0.0 T 22-04-2016 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 8.1E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VPUCM_RS00800 b17caee291b9c23a1d134a5c5320a4b4 706 Gene3D G3DSA:3.10.20.30 388 448 7.5E-20 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 8.8E-136 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 Gene3D G3DSA:2.30.42.10 202 291 3.1E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 Gene3D G3DSA:2.30.42.10 95 187 8.6E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 PANTHER PTHR22939 130 452 5.5E-95 T 22-04-2016 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 SMART SM00228 115 186 0.43 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 SMART SM00228 212 281 3.2E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 SUPERFAMILY SSF50156 210 294 1.71E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 SUPERFAMILY SSF50156 89 185 4.47E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 PANTHER PTHR22939:SF78 130 452 5.5E-95 T 22-04-2016 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 Pfam PF13180 PDZ domain 226 288 3.3E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS04665 09f130a58c83c473fd97e1ed487df524 452 Pfam PF02163 Peptidase family M50 11 440 2.9E-87 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 VPUCM_RS12910 65310129544b095333ed460814792d41 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VPUCM_RS12910 65310129544b095333ed460814792d41 865 SUPERFAMILY SSF52016 162 372 2.2E-72 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VPUCM_RS12910 65310129544b095333ed460814792d41 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS12910 65310129544b095333ed460814792d41 865 Gene3D G3DSA:3.30.499.10 402 519 9.0E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS12910 65310129544b095333ed460814792d41 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 7.9E-67 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VPUCM_RS12910 65310129544b095333ed460814792d41 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.9E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS12910 65310129544b095333ed460814792d41 865 SUPERFAMILY SSF53732 379 861 8.89E-148 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS12910 65310129544b095333ed460814792d41 865 Gene3D G3DSA:3.30.499.10 684 859 1.8E-54 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS12910 65310129544b095333ed460814792d41 865 Gene3D G3DSA:3.20.19.10 162 361 3.6E-96 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VPUCM_RS12910 65310129544b095333ed460814792d41 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 3.4E-100 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VPUCM_RS12910 65310129544b095333ed460814792d41 865 Gene3D G3DSA:3.40.1060.10 520 682 8.0E-85 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS12910 65310129544b095333ed460814792d41 865 SUPERFAMILY SSF74778 2 160 2.22E-68 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VPUCM_RS12910 65310129544b095333ed460814792d41 865 PANTHER PTHR11670 305 863 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS12910 65310129544b095333ed460814792d41 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VPUCM_RS12910 65310129544b095333ed460814792d41 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS12910 65310129544b095333ed460814792d41 865 PANTHER PTHR11670:SF39 305 863 0.0 T 22-04-2016 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 SUPERFAMILY SSF52172 456 574 3.7E-35 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 Gene3D G3DSA:1.10.287.130 206 264 5.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 6.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 6.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 6.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 6.1E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 SUPERFAMILY SSF55874 268 436 5.11E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 SUPERFAMILY SSF47384 199 280 1.84E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 Pfam PF00072 Response regulator receiver domain 459 570 8.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 PANTHER PTHR24423 212 574 5.3E-139 T 22-04-2016 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 PANTHER PTHR24423 10 24 5.3E-139 T 22-04-2016 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 Gene3D G3DSA:3.30.565.10 265 437 7.5E-48 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 SMART SM00448 456 569 3.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 SMART SM00387 326 437 2.4E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 2.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 1.5E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 SMART SM00388 214 279 1.3E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS08195 dd43ddebdfdb17e524786f0368463d15 576 Gene3D G3DSA:3.40.50.2300 448 575 2.1E-39 T 22-04-2016 VPUCM_RS08965 f0ce0210b547d02c0147ed3dfe53c8e9 248 Pfam PF00929 Exonuclease 59 229 4.3E-17 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS08965 f0ce0210b547d02c0147ed3dfe53c8e9 248 PANTHER PTHR30231 22 236 1.7E-70 T 22-04-2016 VPUCM_RS08965 f0ce0210b547d02c0147ed3dfe53c8e9 248 Gene3D G3DSA:3.30.420.10 51 240 1.6E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS08965 f0ce0210b547d02c0147ed3dfe53c8e9 248 SUPERFAMILY SSF53098 50 238 1.88E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS08965 f0ce0210b547d02c0147ed3dfe53c8e9 248 SMART SM00479 57 238 4.3E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS08965 f0ce0210b547d02c0147ed3dfe53c8e9 248 PANTHER PTHR30231:SF11 22 236 1.7E-70 T 22-04-2016 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PANTHER PTHR39083:SF1 54 759 2.1E-100 T 22-04-2016 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 371 392 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 165 186 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 455 474 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 699 719 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 540 560 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 75 96 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 124 147 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 207 230 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 503 522 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PRINTS PR01440 Cellulose synthase subunit B signature 288 309 4.7E-38 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 Pfam PF03170 Bacterial cellulose synthase subunit 49 659 7.8E-204 T 22-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11995 b531b4f6f8c7654bb6cb41009a16de93 761 PANTHER PTHR39083 54 759 2.1E-100 T 22-04-2016 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 3.3E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 SUPERFAMILY SSF52540 1 192 1.81E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 Gene3D G3DSA:3.40.50.300 1 213 1.4E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 Pfam PF00406 Adenylate kinase 5 185 8.3E-60 T 22-04-2016 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 PANTHER PTHR23359 1 213 8.9E-112 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.623 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 8.2E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS11915 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.2E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 Gene3D G3DSA:3.20.20.70 284 472 1.1E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 SUPERFAMILY SSF51366 23 276 3.65E-82 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 72 90 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 Gene3D G3DSA:3.20.20.70 23 283 1.4E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 25 279 35.661 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 SUPERFAMILY SSF51366 282 477 3.61E-55 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 PANTHER PTHR22854 1 307 4.6E-138 T 22-04-2016 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 280 479 30.545 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 PANTHER PTHR22854:SF2 1 307 4.6E-138 T 22-04-2016 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 282 473 7.4E-61 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VPUCM_RS06340 3dc1e474761d4388c0af94df1f3320a1 479 Pfam PF00218 Indole-3-glycerol phosphate synthase 27 276 3.5E-98 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.4E-91 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 PIRSF PIRSF000164 10 336 3.2E-106 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 Gene3D G3DSA:3.20.20.70 1 336 9.7E-130 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.3E-146 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 PANTHER PTHR11938 11 335 1.5E-100 T 22-04-2016 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.614 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 SUPERFAMILY SSF51395 1 336 2.47E-109 T 22-04-2016 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VPUCM_RS08355 30aaf8cd38b8df13903ccffe8beaa5a2 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VPUCM_RS14290 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS14290 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.3E-22 T 22-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- VPUCM_RS14290 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.6E-44 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS14290 75ab96704cbd899c47e0a2b399f96a9f 153 PANTHER PTHR39452 1 153 6.5E-80 T 22-04-2016 VPUCM_RS14290 75ab96704cbd899c47e0a2b399f96a9f 153 PANTHER PTHR39452:SF1 1 153 6.5E-80 T 22-04-2016 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 SUPERFAMILY SSF55205 1 424 2.22E-144 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 1.2E-156 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 2.5E-142 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 PANTHER PTHR21090 1 425 3.9E-212 T 22-04-2016 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.481 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 PIRSF PIRSF000505 1 426 2.3E-154 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 Gene3D G3DSA:3.65.10.10 22 238 1.2E-69 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VPUCM_RS10865 488cf59216ba4cde6ea939e6db8cbec4 426 Gene3D G3DSA:3.65.10.10 239 424 5.8E-74 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 SUPERFAMILY SSF51905 1 191 2.71E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 SUPERFAMILY SSF51905 340 397 2.71E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 Gene3D G3DSA:2.40.30.10 192 272 8.9E-28 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.45E-9 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 7.45E-9 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 7.45E-9 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 6.8E-130 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 SUPERFAMILY SSF160996 193 341 4.05E-41 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 Gene3D G3DSA:1.10.8.260 273 325 2.3E-21 T 22-04-2016 IPR023166 HI0933 insert-like domain VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PANTHER PTHR10617 1 289 5.3E-129 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PANTHER PTHR10617 333 397 5.3E-129 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 1.34E-5 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.34E-5 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.34E-5 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 Gene3D G3DSA:3.50.50.60 2 189 9.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 Gene3D G3DSA:3.50.50.60 342 395 9.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PANTHER PTHR10617:SF103 1 289 5.3E-129 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 PANTHER PTHR10617:SF103 333 397 5.3E-129 T 22-04-2016 VPUCM_RS00415 3139e338a69d4337c3dbae4d84cd0eac 397 Pfam PF03486 HI0933-like protein 5 395 2.4E-157 T 22-04-2016 VPUCM_RS03210 73d0125e92b1dda16152de6b8fb1a3f6 379 SUPERFAMILY SSF53474 73 227 6.32E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS03210 73d0125e92b1dda16152de6b8fb1a3f6 379 Gene3D G3DSA:3.40.50.1820 58 219 1.5E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS03210 73d0125e92b1dda16152de6b8fb1a3f6 379 PANTHER PTHR21493 73 213 3.9E-24 T 22-04-2016 VPUCM_RS03210 73d0125e92b1dda16152de6b8fb1a3f6 379 Pfam PF01764 Lipase (class 3) 76 205 3.7E-20 T 22-04-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: REACT_14797|Reactome: REACT_604 VPUCM_RS09825 81646d173d400edb92a86b82f3e6bdd8 306 PANTHER PTHR33525 16 306 5.2E-104 T 22-04-2016 VPUCM_RS09825 81646d173d400edb92a86b82f3e6bdd8 306 PANTHER PTHR33525:SF2 16 306 5.2E-104 T 22-04-2016 VPUCM_RS09825 81646d173d400edb92a86b82f3e6bdd8 306 SUPERFAMILY SSF109604 24 296 7.53E-39 T 22-04-2016 VPUCM_RS09825 81646d173d400edb92a86b82f3e6bdd8 306 Gene3D G3DSA:1.10.3150.10 14 301 1.5E-53 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VPUCM_RS09825 81646d173d400edb92a86b82f3e6bdd8 306 Pfam PF08668 HDOD domain 39 233 5.3E-36 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 Pfam PF00813 FliP family 92 283 1.3E-78 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PANTHER PTHR30587 76 289 1.8E-121 T 22-04-2016 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 7.7E-82 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PANTHER PTHR30587:SF0 76 289 1.8E-121 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.8E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VPUCM_RS11550 04ffc8f661e69f35887d5ff080de4c0f 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 Gene3D G3DSA:3.30.950.10 122 235 1.3E-44 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 PANTHER PTHR21091 9 225 6.3E-93 T 22-04-2016 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 6.7E-30 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 SUPERFAMILY SSF53790 12 232 4.84E-86 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.726 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 PIRSF PIRSF005917 1 286 1.3E-109 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 PANTHER PTHR21091:SF18 9 225 6.3E-93 T 22-04-2016 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 Gene3D G3DSA:3.40.1010.10 13 121 1.9E-15 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VPUCM_RS02215 98fdd4bdbd2775f4fc5a7fe5c5081e2c 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.3E-103 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 Hamap MF_01201 Alanine racemase. 4 360 34.764 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PANTHER PTHR30511 1 359 1.1E-235 T 22-04-2016 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 Gene3D G3DSA:2.40.37.10 218 360 4.9E-56 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PANTHER PTHR30511:SF4 1 359 1.1E-235 T 22-04-2016 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 342 355 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 290 307 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 252 267 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 123 135 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 29 45 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 63 81 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 269 284 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 195 222 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 158 169 9.2E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 SUPERFAMILY SSF50621 229 360 3.0E-47 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 TIGRFAM TIGR00492 alr: alanine racemase 7 359 8.6E-129 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 SUPERFAMILY SSF51419 11 237 1.57E-70 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 Gene3D G3DSA:3.20.20.10 13 217 2.6E-72 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 4.9E-70 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 SMART SM01005 236 360 1.6E-67 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14310 545800f74c06a3e6c753333f8667be40 361 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 8.4E-40 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 SMART SM00345 9 68 1.9E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 PANTHER PTHR11751:SF364 3 94 4.6E-39 T 22-04-2016 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 Gene3D G3DSA:1.10.10.10 3 74 3.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 Gene3D G3DSA:3.40.1410.10 88 224 7.7E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 7.2E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 SMART SM00866 91 228 2.1E-24 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 SUPERFAMILY SSF46785 3 72 3.95E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 SUPERFAMILY SSF64288 95 231 2.51E-36 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 PANTHER PTHR11751 3 94 4.6E-39 T 22-04-2016 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 Pfam PF07702 UTRA domain 92 228 2.0E-31 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VPUCM_RS09640 6db2eac9088e3a52d6033a17ca910b1b 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 2.5E-91 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.4E-55 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 6.6E-190 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 159 3.8E-49 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 PIRSF PIRSF000149 1 342 4.8E-127 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 PANTHER PTHR10836 1 345 2.1E-235 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 SUPERFAMILY SSF55347 159 321 6.55E-59 T 22-04-2016 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 SMART SM00846 2 159 1.9E-73 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 SUPERFAMILY SSF51735 2 183 3.39E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 PANTHER PTHR10836:SF47 1 345 2.1E-235 T 22-04-2016 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 Gene3D G3DSA:3.30.360.10 168 322 1.5E-61 T 22-04-2016 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 Gene3D G3DSA:3.40.50.720 1 167 8.6E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.903 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS13450 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.6E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS22115 fdae3f9d4ae94dba852f4cf208274da3 258 Gene3D G3DSA:3.40.1190.20 68 258 1.2E-29 T 22-04-2016 IPR029056 Ribokinase-like VPUCM_RS22115 fdae3f9d4ae94dba852f4cf208274da3 258 PANTHER PTHR10584:SF202 1 258 3.1E-168 T 22-04-2016 VPUCM_RS22115 fdae3f9d4ae94dba852f4cf208274da3 258 PANTHER PTHR10584 1 258 3.1E-168 T 22-04-2016 VPUCM_RS22115 fdae3f9d4ae94dba852f4cf208274da3 258 SUPERFAMILY SSF53613 3 258 7.79E-36 T 22-04-2016 IPR029056 Ribokinase-like VPUCM_RS22115 fdae3f9d4ae94dba852f4cf208274da3 258 Gene3D G3DSA:3.30.1110.10 17 67 2.3E-5 T 22-04-2016 VPUCM_RS22115 fdae3f9d4ae94dba852f4cf208274da3 258 Pfam PF00294 pfkB family carbohydrate kinase 48 246 1.3E-11 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 5.0E-52 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 PANTHER PTHR30627:SF2 7 638 6.5E-264 T 22-04-2016 VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 PANTHER PTHR30627 7 638 6.5E-264 T 22-04-2016 VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 Gene3D G3DSA:3.90.1310.10 132 254 2.1E-39 T 22-04-2016 VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 3.7E-240 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 Gene3D G3DSA:3.40.710.10 256 619 1.4E-102 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 3.1E-73 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 SUPERFAMILY SSF56519 58 254 2.49E-56 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VPUCM_RS12500 7d2ffb2d7929a602b896d369cd4bce74 641 SUPERFAMILY SSF56601 256 619 2.54E-96 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 PANTHER PTHR11963:SF20 43 432 1.2E-244 T 22-04-2016 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 Pfam PF12404 Peptidase 5 81 3.7E-34 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 SUPERFAMILY SSF53187 105 428 1.35E-101 T 22-04-2016 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 66.191 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 PANTHER PTHR11963 43 432 1.2E-244 T 22-04-2016 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 Gene3D G3DSA:3.40.630.10 94 430 6.7E-118 T 22-04-2016 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 PIRSF PIRSF036388 1 432 1.8E-223 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 108 422 4.7E-100 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS02980 03edecd6181aa890260f16796fd0545f 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 2.7E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VPUCM_RS09470 0f0cd5b9d332bf1eb5b78d017a15b345 254 Gene3D G3DSA:3.40.50.300 15 237 4.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09470 0f0cd5b9d332bf1eb5b78d017a15b345 254 SMART SM00382 21 216 3.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS09470 0f0cd5b9d332bf1eb5b78d017a15b345 254 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 254 48.746 T 22-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VPUCM_RS09470 0f0cd5b9d332bf1eb5b78d017a15b345 254 Pfam PF00005 ABC transporter 14 167 6.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS09470 0f0cd5b9d332bf1eb5b78d017a15b345 254 PANTHER PTHR24220 1 236 2.1E-83 T 22-04-2016 VPUCM_RS09470 0f0cd5b9d332bf1eb5b78d017a15b345 254 SUPERFAMILY SSF52540 15 230 8.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09470 0f0cd5b9d332bf1eb5b78d017a15b345 254 PANTHER PTHR24220:SF547 1 236 2.1E-83 T 22-04-2016 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 PANTHER PTHR24423 907 1051 1.5E-150 T 22-04-2016 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 PANTHER PTHR24423 366 625 1.5E-150 T 22-04-2016 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 PANTHER PTHR24423 81 109 1.5E-150 T 22-04-2016 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 Gene3D G3DSA:3.40.50.2300 769 890 2.3E-40 T 22-04-2016 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 Pfam PF00072 Response regulator receiver domain 770 885 1.9E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 Pfam PF00072 Response regulator receiver domain 932 1047 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 Gene3D G3DSA:3.40.50.2300 927 1050 1.8E-40 T 22-04-2016 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 Gene3D G3DSA:3.30.565.10 469 618 1.1E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 619 6.7E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 SUPERFAMILY SSF52172 768 896 4.13E-37 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 SMART SM00448 768 885 7.6E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 SMART SM00448 930 1047 1.6E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 Pfam PF00512 His Kinase A (phospho-acceptor) domain 394 459 8.5E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 Gene3D G3DSA:1.10.287.130 390 455 8.2E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 1.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 SMART SM00387 506 622 3.4E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 SMART SM00388 394 459 1.6E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 SUPERFAMILY SSF55874 448 618 4.45E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 SUPERFAMILY SSF47384 382 459 3.14E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09110 241f596823cb34827b63543dc0e0204d 1051 SUPERFAMILY SSF52172 928 1050 1.99E-37 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 PANTHER PTHR11071 23 180 1.0E-58 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 Gene3D G3DSA:2.40.100.10 20 180 6.6E-49 T 22-04-2016 IPR029000 Cyclophilin-like domain VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 SUPERFAMILY SSF50891 18 180 9.64E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 1.7E-43 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 PIRSF PIRSF001467 5 181 2.4E-24 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 PANTHER PTHR11071:SF265 23 180 1.0E-58 T 22-04-2016 VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 9.2E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 9.2E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 9.2E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VPUCM_RS04450 71e635ca4241f4deadb5210979b0ad8e 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 SUPERFAMILY SSF51206 19 132 2.09E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 Pfam PF00027 Cyclic nucleotide-binding domain 22 101 1.4E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 Gene3D G3DSA:3.30.565.10 293 440 1.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PANTHER PTHR24423:SF450 256 441 5.4E-39 T 22-04-2016 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PANTHER PTHR24423:SF450 13 18 5.4E-39 T 22-04-2016 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PANTHER PTHR24423:SF450 128 181 5.4E-39 T 22-04-2016 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PANTHER PTHR24423 256 441 5.4E-39 T 22-04-2016 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PANTHER PTHR24423 13 18 5.4E-39 T 22-04-2016 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PANTHER PTHR24423 128 181 5.4E-39 T 22-04-2016 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 SMART SM00387 329 440 3.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 SMART SM00100 2 124 5.7E-4 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 Gene3D G3DSA:2.60.120.10 19 131 1.4E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 SUPERFAMILY SSF55874 293 437 6.42E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 439 6.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS07680 e6541f776d958666febce037bd84d85d 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 SUPERFAMILY SSF49493 17 41 1.96E-9 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 SUPERFAMILY SSF49493 117 129 1.96E-9 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 SUPERFAMILY SSF57938 37 113 2.88E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 Gene3D G3DSA:2.10.230.10 44 113 3.3E-26 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 PANTHER PTHR24078 1 129 3.9E-51 T 22-04-2016 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 Pfam PF01556 DnaJ C terminal domain 24 129 5.9E-8 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 PANTHER PTHR24078:SF231 1 129 3.9E-51 T 22-04-2016 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 Pfam PF00684 DnaJ central domain 50 110 4.8E-16 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 Gene3D G3DSA:2.60.260.20 11 43 5.9E-13 T 22-04-2016 VPUCM_RS19335 aaffcbfed911b5ead700acf3c9ff3bb7 129 Gene3D G3DSA:2.60.260.20 114 129 5.9E-13 T 22-04-2016 VPUCM_RS10795 263522781bc68efe58322db0cdb0f950 445 PIRSF PIRSF018282 1 445 1.3E-247 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VPUCM_RS10795 263522781bc68efe58322db0cdb0f950 445 Pfam PF03882 MukF winged-helix domain 10 122 2.9E-53 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain VPUCM_RS10795 263522781bc68efe58322db0cdb0f950 445 Gene3D G3DSA:1.10.10.10 29 123 1.4E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10795 263522781bc68efe58322db0cdb0f950 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.428 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VPUCM_RS10795 263522781bc68efe58322db0cdb0f950 445 SUPERFAMILY SSF46785 13 123 2.24E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10795 263522781bc68efe58322db0cdb0f950 445 Pfam PF17193 MukF C-terminal domain 288 445 1.1E-77 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain VPUCM_RS10795 263522781bc68efe58322db0cdb0f950 445 Pfam PF17192 MukF middle domain 126 286 2.1E-78 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VPUCM_RS10795 263522781bc68efe58322db0cdb0f950 445 SUPERFAMILY SSF140570 124 286 3.79E-76 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 1.2E-139 T 22-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 PANTHER PTHR30600 24 97 1.0E-159 T 22-04-2016 VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 PANTHER PTHR30600 245 460 1.0E-159 T 22-04-2016 VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 PANTHER PTHR30600 172 220 1.0E-159 T 22-04-2016 VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 PANTHER PTHR30600:SF4 24 97 1.0E-159 T 22-04-2016 VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 PANTHER PTHR30600:SF4 245 460 1.0E-159 T 22-04-2016 VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 PANTHER PTHR30600:SF4 172 220 1.0E-159 T 22-04-2016 VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 Gene3D G3DSA:1.10.760.10 323 460 4.1E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 SUPERFAMILY SSF46626 319 460 8.25E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS06555 2da7f72c0247652d122250e4dae039c5 460 PIRSF PIRSF028099 6 460 4.0E-185 T 22-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 Gene3D G3DSA:3.90.650.10 173 343 2.0E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 2.5E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 Gene3D G3DSA:3.30.1330.10 23 171 8.8E-65 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 SUPERFAMILY SSF55326 8 171 2.99E-54 T 22-04-2016 VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 PANTHER PTHR10520 8 346 7.2E-227 T 22-04-2016 VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.865 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 1.0E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.5E-151 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS11770 944f706234ddec63b812e43ec5f9a102 346 SUPERFAMILY SSF56042 172 341 2.99E-62 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS09080 6f7875c9ee331a91c04f0a78759c8502 475 PANTHER PTHR11785 11 458 2.0E-106 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS09080 6f7875c9ee331a91c04f0a78759c8502 475 PIRSF PIRSF006060 8 472 5.0E-54 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS09080 6f7875c9ee331a91c04f0a78759c8502 475 PANTHER PTHR11785:SF216 11 458 2.0E-106 T 22-04-2016 VPUCM_RS09080 6f7875c9ee331a91c04f0a78759c8502 475 Pfam PF13520 Amino acid permease 11 448 5.9E-53 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 Gene3D G3DSA:1.10.3130.10 7 142 2.5E-46 T 22-04-2016 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 4.0E-37 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 SMART SM00971 9 113 6.0E-59 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 PANTHER PTHR23416 5 268 2.9E-150 T 22-04-2016 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.5E-9 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 Gene3D G3DSA:2.160.10.10 143 250 4.0E-31 T 22-04-2016 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.5E-74 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 PANTHER PTHR23416:SF2 5 268 2.9E-150 T 22-04-2016 VPUCM_RS14845 9377db12b0a1b3e6406373358133bae8 273 SUPERFAMILY SSF51161 8 258 3.97E-63 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:1.10.287.610 100 152 3.0E-26 T 22-04-2016 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.3E-107 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 SUPERFAMILY SSF52313 6 232 9.03E-96 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:3.40.50.10490 23 99 3.1E-65 T 22-04-2016 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:3.40.50.10490 158 230 3.1E-65 T 22-04-2016 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.122 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.1E-37 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 PANTHER PTHR12534 1 231 6.6E-123 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 VPUCM_RS04630 f906f65ac86428713f372396bb26d105 242 Pfam PF00318 Ribosomal protein S2 9 224 9.9E-94 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01525 dc8e1b2b869c12c3d75eecb65f278b23 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P VPUCM_RS01525 dc8e1b2b869c12c3d75eecb65f278b23 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01525 dc8e1b2b869c12c3d75eecb65f278b23 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 8.5E-51 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS01525 dc8e1b2b869c12c3d75eecb65f278b23 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 9.0E-32 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P VPUCM_RS01525 dc8e1b2b869c12c3d75eecb65f278b23 144 Gene3D G3DSA:3.100.10.10 32 143 9.2E-27 T 22-04-2016 VPUCM_RS01525 dc8e1b2b869c12c3d75eecb65f278b23 144 PANTHER PTHR12934 1 144 2.1E-72 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS01525 dc8e1b2b869c12c3d75eecb65f278b23 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.103 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF04963 Sigma-54 factor, core binding domain 127 316 4.9E-61 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 375 394 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 PANTHER PTHR32248:SF4 1 488 2.5E-177 T 22-04-2016 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 PANTHER PTHR32248 1 488 2.5E-177 T 22-04-2016 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 2.1E-17 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 403 414 7.6E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 387 399 7.6E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 199 216 7.6E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 461 479 7.6E-32 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 PIRSF PIRSF000774 1 488 5.3E-152 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 485 2.2E-157 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF04552 Sigma-54, DNA binding domain 328 486 3.7E-72 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding VPUCM_RS13975 75ed7b0fa3ce1962d44e75b2902963ea 488 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 466 473 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 77 400 1.8E-55 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 PANTHER PTHR10314:SF9 44 131 2.6E-205 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 PANTHER PTHR10314:SF9 155 441 2.6E-205 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 1.1E-218 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 Gene3D G3DSA:3.40.50.1100 180 433 5.9E-45 T 22-04-2016 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 269.826 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 PANTHER PTHR10314 44 131 2.6E-205 T 22-04-2016 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 PANTHER PTHR10314 155 441 2.6E-205 T 22-04-2016 VPUCM_RS09785 eaa80ef02fbbd63f12ad1c435ef50aba 443 SUPERFAMILY SSF53686 74 431 1.28E-56 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.2E-50 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 Gene3D G3DSA:4.10.520.10 2 93 6.7E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 PANTHER PTHR33175:SF2 2 98 4.9E-53 T 22-04-2016 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 PANTHER PTHR33175 2 98 4.9E-53 T 22-04-2016 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 SMART SM00411 3 92 1.6E-40 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 SUPERFAMILY SSF47729 3 95 3.53E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.604 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VPUCM_RS09555 936458ad6b1d021333851a8406ab6d6d 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 SUPERFAMILY SSF53732 16 595 3.53E-188 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 Gene3D G3DSA:3.30.499.10 365 550 4.9E-56 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 Gene3D G3DSA:3.20.19.10 609 860 1.4E-63 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 SUPERFAMILY SSF52016 602 860 1.33E-67 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 Gene3D G3DSA:3.30.499.10 27 230 2.2E-60 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 859 3.8E-291 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 468 481 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 209 224 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 142 155 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 364 378 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 166 174 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 406 417 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 285 298 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 271 284 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PRINTS PR00415 Aconitase family signature 195 208 2.1E-26 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 Gene3D G3DSA:3.40.1060.10 231 364 7.7E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PANTHER PTHR11670 13 680 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PANTHER PTHR11670 723 863 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 862 0.0 T 22-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 4.7E-148 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 Pfam PF00694 Aconitase C-terminal domain 660 790 3.4E-30 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PANTHER PTHR11670:SF43 13 680 0.0 T 22-04-2016 VPUCM_RS08575 425f13197b48768247602a955d4bf8b4 863 PANTHER PTHR11670:SF43 723 863 0.0 T 22-04-2016 VPUCM_RS09440 94ee2d80dcc21d7544dc698c43540cd3 171 PANTHER PTHR30399:SF4 1 163 5.9E-91 T 22-04-2016 VPUCM_RS09440 94ee2d80dcc21d7544dc698c43540cd3 171 Pfam PF01863 Protein of unknown function DUF45 94 150 3.7E-10 T 22-04-2016 IPR002725 Protein of unknown function DUF45 VPUCM_RS09440 94ee2d80dcc21d7544dc698c43540cd3 171 PANTHER PTHR30399 1 163 5.9E-91 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Gene3D G3DSA:3.30.450.20 233 353 6.3E-5 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.7E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SUPERFAMILY SSF47384 446 527 2.35E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SUPERFAMILY SSF55874 516 687 2.1E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SUPERFAMILY SSF55785 860 927 2.09E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SMART SM00388 459 527 1.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Gene3D G3DSA:1.10.287.130 452 512 9.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SUPERFAMILY SSF158472 378 429 1.27E-10 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Pfam PF13188 PAS domain 879 916 1.7E-4 T 22-04-2016 IPR000014 PAS domain VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.0E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SMART SM00387 573 684 4.7E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Gene3D G3DSA:3.30.450.20 868 926 1.7E-9 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PANTHER PTHR24423 8 18 5.6E-128 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PANTHER PTHR24423 371 428 5.6E-128 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PANTHER PTHR24423 148 217 5.6E-128 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PANTHER PTHR24423 457 886 5.6E-128 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SMART SM00448 722 835 3.3E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SUPERFAMILY SSF52172 718 843 1.25E-40 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SMART SM00091 873 938 7.0E-6 T 22-04-2016 IPR000014 PAS domain VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 SMART SM00304 377 430 1.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PANTHER PTHR24423:SF374 8 18 5.6E-128 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PANTHER PTHR24423:SF374 371 428 5.6E-128 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PANTHER PTHR24423:SF374 148 217 5.6E-128 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 PANTHER PTHR24423:SF374 457 886 5.6E-128 T 22-04-2016 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Pfam PF00672 HAMP domain 358 427 5.8E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Gene3D G3DSA:3.30.565.10 513 687 5.7E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS12825 e09f536f07941870723bd8b4eacf8f8d 1128 Gene3D G3DSA:3.40.50.2300 722 843 2.5E-41 T 22-04-2016 VPUCM_RS00920 dd65d38970543ae519ae6cc7dbd8ae5e 213 PANTHER PTHR19278:SF36 1 213 4.0E-144 T 22-04-2016 VPUCM_RS00920 dd65d38970543ae519ae6cc7dbd8ae5e 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.236 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS00920 dd65d38970543ae519ae6cc7dbd8ae5e 213 Gene3D G3DSA:3.40.50.2020 7 212 1.5E-85 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS00920 dd65d38970543ae519ae6cc7dbd8ae5e 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.4E-69 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS00920 dd65d38970543ae519ae6cc7dbd8ae5e 213 SUPERFAMILY SSF53271 2 211 3.55E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS00920 dd65d38970543ae519ae6cc7dbd8ae5e 213 Pfam PF00156 Phosphoribosyl transferase domain 43 160 1.1E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VPUCM_RS00920 dd65d38970543ae519ae6cc7dbd8ae5e 213 PANTHER PTHR19278 1 213 4.0E-144 T 22-04-2016 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 SUPERFAMILY SSF46785 1 87 9.31E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:3.40.190.10 201 265 3.6E-11 T 22-04-2016 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 Pfam PF03466 LysR substrate binding domain 87 289 4.0E-34 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 SUPERFAMILY SSF53850 87 290 1.21E-28 T 22-04-2016 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:1.10.10.10 1 81 2.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.9E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 PANTHER PTHR30126 1 288 1.4E-166 T 22-04-2016 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 PANTHER PTHR30126:SF14 1 288 1.4E-166 T 22-04-2016 VPUCM_RS00185 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:3.40.190.10 82 200 4.5E-19 T 22-04-2016 VPUCM_RS03250 d08054feb11b2a071ea1d2d551b8f280 179 Gene3D G3DSA:1.10.150.130 110 178 2.0E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VPUCM_RS03250 d08054feb11b2a071ea1d2d551b8f280 179 PANTHER PTHR30629 2 179 1.9E-54 T 22-04-2016 VPUCM_RS03250 d08054feb11b2a071ea1d2d551b8f280 179 Pfam PF13356 Domain of unknown function (DUF4102) 8 95 4.3E-19 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 VPUCM_RS03250 d08054feb11b2a071ea1d2d551b8f280 179 SUPERFAMILY SSF56349 106 178 2.24E-6 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS03250 d08054feb11b2a071ea1d2d551b8f280 179 PANTHER PTHR30629:SF2 2 179 1.9E-54 T 22-04-2016 VPUCM_RS14320 063f2a64976f1cdb0f17bf118c512081 254 Gene3D G3DSA:2.40.160.10 39 135 8.4E-4 T 22-04-2016 IPR023614 Porin domain VPUCM_RS14320 063f2a64976f1cdb0f17bf118c512081 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 4.3E-53 T 22-04-2016 IPR007433 Protein of unknown function DUF481 VPUCM_RS14320 063f2a64976f1cdb0f17bf118c512081 254 SUPERFAMILY SSF56935 36 208 6.92E-5 T 22-04-2016 VPUCM_RS11380 589f876c337f599e61aa236cec070d07 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 1.3E-35 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VPUCM_RS11380 589f876c337f599e61aa236cec070d07 154 Gene3D G3DSA:3.40.50.1240 1 152 9.8E-37 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VPUCM_RS11380 589f876c337f599e61aa236cec070d07 154 SMART SM00855 2 116 5.9E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VPUCM_RS11380 589f876c337f599e61aa236cec070d07 154 SUPERFAMILY SSF53254 1 144 2.57E-21 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VPUCM_RS11380 589f876c337f599e61aa236cec070d07 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 1.3E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 2.7E-19 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 SUPERFAMILY SSF56349 113 303 3.83E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 SUPERFAMILY SSF47823 11 107 8.63E-34 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 PANTHER PTHR30349:SF5 14 305 1.7E-119 T 22-04-2016 VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 Gene3D G3DSA:1.10.150.130 14 106 1.9E-27 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 PANTHER PTHR30349 14 305 1.7E-119 T 22-04-2016 VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 Gene3D G3DSA:1.10.443.10 120 297 2.4E-59 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 11 305 30.308 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 2.6E-115 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.817 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VPUCM_RS02505 bd65f5e4841bcb916a6b11af72309cd4 305 Pfam PF00589 Phage integrase family 120 291 6.7E-53 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 PANTHER PTHR30093 1 66 4.4E-18 T 22-04-2016 VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 Pfam PF13633 Prokaryotic N-terminal methylation site 9 35 2.3E-12 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 SUPERFAMILY SSF54523 12 133 4.87E-22 T 22-04-2016 VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 2.6E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 Pfam PF00114 Pilin (bacterial filament) 40 133 1.3E-11 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 2.0E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 2.0E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VPUCM_RS13030 f68f6fc14bb9652a3929f97a26b623ae 139 Gene3D G3DSA:3.30.700.10 12 128 6.9E-28 T 22-04-2016 VPUCM_RS15335 3bb12651b423c8f51990b5723f7c4c2c 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 1.9E-17 T 22-04-2016 IPR000504 RNA recognition motif domain GO:0003676 VPUCM_RS15335 3bb12651b423c8f51990b5723f7c4c2c 151 Gene3D G3DSA:3.30.70.330 47 141 2.6E-27 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VPUCM_RS15335 3bb12651b423c8f51990b5723f7c4c2c 151 SUPERFAMILY SSF54928 47 141 2.42E-27 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VPUCM_RS15335 3bb12651b423c8f51990b5723f7c4c2c 151 SMART SM00360 63 135 2.1E-20 T 22-04-2016 IPR000504 RNA recognition motif domain GO:0003676 VPUCM_RS15335 3bb12651b423c8f51990b5723f7c4c2c 151 PANTHER PTHR24012 53 140 1.2E-22 T 22-04-2016 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 PANTHER PTHR32071:SF33 13 467 5.8E-219 T 22-04-2016 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 SUPERFAMILY SSF52172 12 191 1.57E-41 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 Pfam PF00072 Response regulator receiver domain 14 122 1.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 Gene3D G3DSA:1.10.8.60 320 392 1.4E-21 T 22-04-2016 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 Gene3D G3DSA:3.40.50.300 144 319 3.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 PANTHER PTHR32071 13 467 5.8E-219 T 22-04-2016 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 Gene3D G3DSA:3.40.50.2300 13 135 1.9E-34 T 22-04-2016 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 SMART SM00448 11 122 1.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 SMART SM00382 167 310 5.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 SUPERFAMILY SSF52540 147 390 2.26E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 SUPERFAMILY SSF46689 360 457 9.68E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 Pfam PF00158 Sigma-54 interaction domain 148 313 3.2E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 Gene3D G3DSA:1.10.10.60 413 456 6.8E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS05630 d6947cabc4002c16f47957454ccffda0 467 Pfam PF02954 Bacterial regulatory protein, Fis family 418 458 4.7E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 Pfam PF02222 ATP-grasp domain 121 293 9.3E-59 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 SUPERFAMILY SSF56059 111 313 1.64E-58 T 22-04-2016 VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 Gene3D G3DSA:3.30.470.20 197 387 5.7E-71 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 Gene3D G3DSA:3.30.1490.20 121 196 2.4E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 PANTHER PTHR11609:SF7 1 381 4.3E-219 T 22-04-2016 VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 SUPERFAMILY SSF51246 317 389 5.18E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 Gene3D G3DSA:3.40.50.20 3 118 3.1E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 52.046 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 1.4E-191 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 SUPERFAMILY SSF52440 2 110 1.14E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS09540 9c434bd35567dbc7184d641b7055f089 391 PANTHER PTHR11609 1 381 4.3E-219 T 22-04-2016 VPUCM_RS08770 c76d76f47912231765706b5835202898 142 Pfam PF05932 Tir chaperone protein (CesT) family 9 112 4.1E-6 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VPUCM_RS08770 c76d76f47912231765706b5835202898 142 SUPERFAMILY SSF69635 4 137 1.36E-28 T 22-04-2016 VPUCM_RS08770 c76d76f47912231765706b5835202898 142 Gene3D G3DSA:3.30.1460.10 5 120 2.3E-24 T 22-04-2016 VPUCM_RS04785 79215f0be985ddd93a887f146a90cc25 591 Pfam PF01740 STAS domain 451 543 2.5E-16 T 22-04-2016 IPR002645 STAS domain VPUCM_RS04785 79215f0be985ddd93a887f146a90cc25 591 PANTHER PTHR11814 6 539 2.0E-146 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VPUCM_RS04785 79215f0be985ddd93a887f146a90cc25 591 Pfam PF00916 Sulfate permease family 28 390 1.8E-81 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VPUCM_RS04785 79215f0be985ddd93a887f146a90cc25 591 SUPERFAMILY SSF52091 450 540 2.55E-13 T 22-04-2016 IPR002645 STAS domain VPUCM_RS04785 79215f0be985ddd93a887f146a90cc25 591 Gene3D G3DSA:3.30.750.24 450 540 2.1E-12 T 22-04-2016 IPR002645 STAS domain VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 PANTHER PTHR10657 7 422 5.1E-131 T 22-04-2016 VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 1.2E-23 T 22-04-2016 VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 5.5E-21 T 22-04-2016 VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 Gene3D G3DSA:3.10.50.40 168 271 2.9E-27 T 22-04-2016 VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 Gene3D G3DSA:3.10.50.40 278 401 9.8E-34 T 22-04-2016 VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.991 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 SUPERFAMILY SSF54534 278 380 2.42E-29 T 22-04-2016 VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 SUPERFAMILY SSF109998 24 196 1.7E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 PANTHER PTHR10657:SF15 7 422 5.1E-131 T 22-04-2016 VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 Pfam PF09312 SurA N-terminal domain 24 141 3.7E-43 T 22-04-2016 IPR015391 SurA N-terminal VPUCM_RS01810 ba38074eeee9b87208d15ed069144d08 427 SUPERFAMILY SSF54534 172 270 1.37E-24 T 22-04-2016 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 SUPERFAMILY SSF56601 30 282 6.6E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PRINTS PR00118 Beta-lactamase class A signature 62 79 1.1E-55 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PRINTS PR00118 Beta-lactamase class A signature 219 234 1.1E-55 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PRINTS PR00118 Beta-lactamase class A signature 166 191 1.1E-55 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PRINTS PR00118 Beta-lactamase class A signature 140 164 1.1E-55 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PRINTS PR00118 Beta-lactamase class A signature 202 217 1.1E-55 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PRINTS PR00118 Beta-lactamase class A signature 31 55 1.1E-55 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PRINTS PR00118 Beta-lactamase class A signature 104 129 1.1E-55 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 ProSitePatterns PS00146 Beta-lactamase class-A active site. 64 79 - T 22-04-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 Gene3D G3DSA:3.40.710.10 30 284 9.1E-89 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PANTHER PTHR35333 32 283 3.3E-61 T 22-04-2016 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 Pfam PF13354 Beta-lactamase enzyme family 51 259 2.3E-37 T 22-04-2016 VPUCM_RS03555 96b7de13b18ad6dc9d347986a8063087 287 PANTHER PTHR35333:SF2 32 283 3.3E-61 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 191 263 3.2E-30 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 9 163 5.3E-46 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 PANTHER PTHR19375:SF117 9 336 1.3E-188 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 PANTHER PTHR19375 9 336 1.3E-188 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 267 321 2.6E-35 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 164 190 2.6E-35 T 22-04-2016 VPUCM_RS14075 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 PANTHER PTHR24078 1 352 4.1E-173 T 22-04-2016 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF46565 1 113 5.23E-36 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 SMART SM00271 4 62 5.4E-31 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 PANTHER PTHR24078:SF231 1 352 4.1E-173 T 22-04-2016 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 261 346 7.85E-23 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF00684 DnaJ central domain 149 209 3.8E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.922 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF00226 DnaJ domain 5 67 6.5E-27 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 188 265 1.05E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 115 140 1.05E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.60.260.20 258 335 6.4E-23 T 22-04-2016 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 42 62 3.7E-32 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 7 25 3.7E-32 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 25 40 3.7E-32 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 62 81 3.7E-32 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF01556 DnaJ C terminal domain 123 335 2.1E-45 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.60.260.20 213 256 3.0E-22 T 22-04-2016 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.60.260.20 110 142 3.0E-22 T 22-04-2016 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.1E-140 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF57938 136 212 3.01E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:1.10.287.110 1 104 1.5E-36 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03305 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.10.230.10 143 212 3.4E-25 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VPUCM_RS05750 fefa6f4ea1265bbc7a98c8cd8c3c5fe1 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.594 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VPUCM_RS05750 fefa6f4ea1265bbc7a98c8cd8c3c5fe1 353 SUPERFAMILY SSF142754 29 341 1.7E-105 T 22-04-2016 VPUCM_RS05750 fefa6f4ea1265bbc7a98c8cd8c3c5fe1 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 1.0E-114 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VPUCM_RS05750 fefa6f4ea1265bbc7a98c8cd8c3c5fe1 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 3.2E-101 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VPUCM_RS05750 fefa6f4ea1265bbc7a98c8cd8c3c5fe1 353 PANTHER PTHR30573 1 352 8.3E-164 T 22-04-2016 VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 SUPERFAMILY SSF46565 215 278 7.63E-17 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 PRINTS PR00625 DnaJ domain signature 220 238 1.2E-8 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 PRINTS PR00625 DnaJ domain signature 262 282 1.2E-8 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 PRINTS PR00625 DnaJ domain signature 238 253 1.2E-8 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 284 40.349 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 Pfam PF05099 Tellurite resistance protein TerB 45 177 9.2E-18 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 Gene3D G3DSA:1.10.287.110 223 278 4.4E-15 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 SUPERFAMILY SSF158682 53 185 6.54E-32 T 22-04-2016 IPR029024 TerB-like VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 SUPERFAMILY SSF158682 216 230 6.54E-32 T 22-04-2016 IPR029024 TerB-like VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 SUPERFAMILY SSF158682 5 21 6.54E-32 T 22-04-2016 IPR029024 TerB-like VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 Gene3D G3DSA:1.10.3680.10 20 222 2.4E-39 T 22-04-2016 IPR029024 TerB-like VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 SMART SM00271 217 282 1.0E-17 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS01820 e384378d7e9932f31bfe68616ebe45e5 284 Pfam PF00226 DnaJ domain 218 278 6.8E-12 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS09260 2b167fb3e1a61fcb202724f0c61faf1e 208 Pfam PF01810 LysE type translocator 15 205 6.3E-32 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS09260 2b167fb3e1a61fcb202724f0c61faf1e 208 PIRSF PIRSF006324 1 208 3.5E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS09260 2b167fb3e1a61fcb202724f0c61faf1e 208 PANTHER PTHR30086:SF3 1 208 2.3E-92 T 22-04-2016 VPUCM_RS09260 2b167fb3e1a61fcb202724f0c61faf1e 208 PANTHER PTHR30086 1 208 2.3E-92 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 8.7E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 SUPERFAMILY SSF51735 1 242 5.45E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PANTHER PTHR24322:SF513 151 182 8.2E-45 T 22-04-2016 VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PANTHER PTHR24322 151 182 8.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PANTHER PTHR24322 1 134 8.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 Gene3D G3DSA:3.40.50.720 1 242 6.0E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 PANTHER PTHR24322:SF513 1 134 8.2E-45 T 22-04-2016 VPUCM_RS06960 2348294c919cfee05e7aae24d6f575ee 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 6 242 1.5E-54 T 22-04-2016 VPUCM_RS01110 c44d87c4fc5bf0f23de1033a6dc91933 365 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 11 350 4.2E-120 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 VPUCM_RS01110 c44d87c4fc5bf0f23de1033a6dc91933 365 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 353 24.31 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 VPUCM_RS01110 c44d87c4fc5bf0f23de1033a6dc91933 365 PANTHER PTHR22926:SF3 5 358 3.7E-61 T 22-04-2016 VPUCM_RS01110 c44d87c4fc5bf0f23de1033a6dc91933 365 Pfam PF00953 Glycosyl transferase family 4 71 229 7.7E-24 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS01110 c44d87c4fc5bf0f23de1033a6dc91933 365 PANTHER PTHR22926 5 358 3.7E-61 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 Pfam PF00691 OmpA family 84 179 1.4E-19 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 Gene3D G3DSA:4.10.1080.10 32 74 3.8E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 Gene3D G3DSA:3.30.1330.60 79 187 5.6E-31 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 PANTHER PTHR30128:SF15 30 203 1.9E-61 T 22-04-2016 VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 PANTHER PTHR30128 30 203 1.9E-61 T 22-04-2016 VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 SUPERFAMILY SSF103088 55 184 1.96E-30 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 PRINTS PR01021 OMPA domain signature 130 146 7.4E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 PRINTS PR01021 OMPA domain signature 115 130 7.4E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS08505 b6629763f679ac48b3bcfaacfb18e60a 205 PRINTS PR01021 OMPA domain signature 85 107 7.4E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS15555 13834963f5f55ef61cece11b5367c153 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 120 201 6.9E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS15555 13834963f5f55ef61cece11b5367c153 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 2.4E-10 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS15555 13834963f5f55ef61cece11b5367c153 238 Gene3D G3DSA:3.40.50.1000 8 62 4.7E-4 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS15555 13834963f5f55ef61cece11b5367c153 238 PANTHER PTHR12725:SF65 1 237 2.4E-59 T 22-04-2016 VPUCM_RS15555 13834963f5f55ef61cece11b5367c153 238 SUPERFAMILY SSF56784 9 238 7.63E-39 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS15555 13834963f5f55ef61cece11b5367c153 238 PANTHER PTHR12725 1 237 2.4E-59 T 22-04-2016 VPUCM_RS15555 13834963f5f55ef61cece11b5367c153 238 Gene3D G3DSA:3.40.50.1000 108 237 4.6E-26 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS07850 88612bc291b6f93754ef46d9d77cacb1 203 PIRSF PIRSF004690 3 198 1.8E-36 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type VPUCM_RS07850 88612bc291b6f93754ef46d9d77cacb1 203 PANTHER PTHR34227 1 201 4.1E-35 T 22-04-2016 VPUCM_RS07850 88612bc291b6f93754ef46d9d77cacb1 203 SUPERFAMILY SSF89155 5 198 4.32E-50 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS07850 88612bc291b6f93754ef46d9d77cacb1 203 PANTHER PTHR34227:SF5 1 201 4.1E-35 T 22-04-2016 VPUCM_RS07850 88612bc291b6f93754ef46d9d77cacb1 203 Pfam PF02613 Nitrate reductase delta subunit 41 157 1.0E-26 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS07850 88612bc291b6f93754ef46d9d77cacb1 203 Gene3D G3DSA:1.10.3480.10 5 198 3.1E-48 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS09760 b2175a80fa083bbdb96075a30bc1f78a 411 PANTHER PTHR11601 1 410 1.7E-147 T 22-04-2016 VPUCM_RS09760 b2175a80fa083bbdb96075a30bc1f78a 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 3.4E-165 T 22-04-2016 IPR011340 Cysteine desulfurase-related VPUCM_RS09760 b2175a80fa083bbdb96075a30bc1f78a 411 Pfam PF00266 Aminotransferase class-V 26 401 1.1E-67 T 22-04-2016 IPR000192 Aminotransferase class V domain VPUCM_RS09760 b2175a80fa083bbdb96075a30bc1f78a 411 SUPERFAMILY SSF53383 3 410 3.81E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS09760 b2175a80fa083bbdb96075a30bc1f78a 411 PANTHER PTHR11601:SF22 1 410 1.7E-147 T 22-04-2016 VPUCM_RS09760 b2175a80fa083bbdb96075a30bc1f78a 411 Gene3D G3DSA:3.90.1150.10 269 410 3.7E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS09760 b2175a80fa083bbdb96075a30bc1f78a 411 Gene3D G3DSA:3.40.640.10 36 268 1.0E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 Gene3D G3DSA:3.40.50.970 359 558 3.3E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 Gene3D G3DSA:3.40.50.1220 192 358 3.7E-66 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 SUPERFAMILY SSF52518 372 567 3.99E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 PANTHER PTHR18968 4 574 0.0 T 22-04-2016 VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 6.0E-47 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 Gene3D G3DSA:3.40.50.970 4 179 4.4E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 SUPERFAMILY SSF52467 191 364 8.66E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 1.8E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 6.4E-273 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 SUPERFAMILY SSF52518 2 181 8.84E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.9E-50 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VPUCM_RS01875 f5be17f24b83545ccb7b12f1a776b4ee 574 PANTHER PTHR18968:SF116 4 574 0.0 T 22-04-2016 VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 PANTHER PTHR32039 1 502 4.0E-261 T 22-04-2016 VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 SUPERFAMILY SSF52540 188 501 7.32E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 Gene3D G3DSA:3.30.230.10 6 153 4.4E-27 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 8.9E-29 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 3.3E-208 T 22-04-2016 IPR004482 Mg chelatase-related protein VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.5E-48 T 22-04-2016 VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 SMART SM00382 210 390 4.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 SUPERFAMILY SSF54211 2 169 6.83E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 PANTHER PTHR32039:SF7 1 502 4.0E-261 T 22-04-2016 IPR004482 Mg chelatase-related protein VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 1.8E-89 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 VPUCM_RS15950 b9cfe10cf49a8c0398c5a11f390656e3 507 Gene3D G3DSA:3.40.50.300 189 385 1.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 SUPERFAMILY SSF55729 466 584 7.85E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.612 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.20.200.10 108 374 5.2E-103 T 22-04-2016 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 SUPERFAMILY SSF48557 3 456 4.71E-142 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.25E-68 T 22-04-2016 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.25E-68 T 22-04-2016 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.25E-68 T 22-04-2016 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.25E-68 T 22-04-2016 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.25E-68 T 22-04-2016 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.25E-68 T 22-04-2016 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF00206 Lyase 6 301 4.4E-88 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.10.40.30 375 432 9.6E-31 T 22-04-2016 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:3.40.630.30 462 601 1.1E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PIRSF PIRSF036456 1 624 0.0 T 22-04-2016 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PANTHER PTHR11444 3 456 1.2E-238 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF00583 Acetyltransferase (GNAT) family 508 571 2.2E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 8.1E-204 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 1.4E-24 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 PANTHER PTHR11444:SF3 3 456 1.2E-238 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14415 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.10.275.10 1 107 8.1E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 2.5E-25 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.337 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 SUPERFAMILY SSF53681 8 108 3.6E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 PANTHER PTHR21198:SF2 1 265 6.3E-93 T 22-04-2016 VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 Gene3D G3DSA:3.40.50.1860 6 174 7.9E-45 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 231 5.4E-69 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 PANTHER PTHR21198 1 265 6.3E-93 T 22-04-2016 VPUCM_RS15340 51865c01751c6d10fe3ea6d6836197b0 270 SUPERFAMILY SSF53681 112 261 1.66E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS07105 a156dd3600761474a726dd9cfc75204c 154 Pfam PF13302 Acetyltransferase (GNAT) domain 6 134 1.7E-21 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS07105 a156dd3600761474a726dd9cfc75204c 154 SUPERFAMILY SSF55729 4 136 1.64E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07105 a156dd3600761474a726dd9cfc75204c 154 PANTHER PTHR13256 2 136 6.3E-16 T 22-04-2016 VPUCM_RS07105 a156dd3600761474a726dd9cfc75204c 154 Gene3D G3DSA:3.40.630.30 4 151 6.1E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS14445 4cf93ac04495568eca1b69696611cc25 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 8.3E-16 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal VPUCM_RS14445 4cf93ac04495568eca1b69696611cc25 179 PANTHER PTHR33169 1 176 4.2E-68 T 22-04-2016 VPUCM_RS14445 4cf93ac04495568eca1b69696611cc25 179 SUPERFAMILY SSF46785 3 176 1.04E-43 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14445 4cf93ac04495568eca1b69696611cc25 179 Gene3D G3DSA:1.10.10.10 1 87 8.3E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14445 4cf93ac04495568eca1b69696611cc25 179 PANTHER PTHR33169:SF4 1 176 4.2E-68 T 22-04-2016 VPUCM_RS14445 4cf93ac04495568eca1b69696611cc25 179 Pfam PF10400 Virulence activator alpha C-term 92 176 6.5E-15 T 22-04-2016 IPR018309 Transcription regulator PadR, C-terminal VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 22 134 8.8E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PANTHER PTHR12220 1 136 6.1E-74 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 3.5E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VPUCM_RS01465 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01020 6dabc09d89fc199a5bb6547b835a434e 161 PANTHER PTHR23416:SF55 33 144 1.1E-15 T 22-04-2016 VPUCM_RS01020 6dabc09d89fc199a5bb6547b835a434e 161 SUPERFAMILY SSF51161 26 145 9.29E-26 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS01020 6dabc09d89fc199a5bb6547b835a434e 161 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 134 3.0E-8 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS01020 6dabc09d89fc199a5bb6547b835a434e 161 PANTHER PTHR23416 33 144 1.1E-15 T 22-04-2016 VPUCM_RS01020 6dabc09d89fc199a5bb6547b835a434e 161 Gene3D G3DSA:2.160.10.10 55 155 1.7E-19 T 22-04-2016 VPUCM_RS18235 97b13af9904abee9df7adddab04fb0a7 204 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 3 65 3.4E-5 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS18235 97b13af9904abee9df7adddab04fb0a7 204 SUPERFAMILY SSF101904 94 204 6.28E-25 T 22-04-2016 VPUCM_RS18235 97b13af9904abee9df7adddab04fb0a7 204 Gene3D G3DSA:1.10.268.10 5 56 3.6E-13 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS18235 97b13af9904abee9df7adddab04fb0a7 204 Gene3D G3DSA:2.120.10.90 93 200 1.8E-13 T 22-04-2016 VPUCM_RS18235 97b13af9904abee9df7adddab04fb0a7 204 PANTHER PTHR10169 1 121 2.3E-62 T 22-04-2016 VPUCM_RS18235 97b13af9904abee9df7adddab04fb0a7 204 SUPERFAMILY SSF56719 3 80 4.05E-14 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VPUCM_RS18235 97b13af9904abee9df7adddab04fb0a7 204 PANTHER PTHR10169:SF30 1 121 2.3E-62 T 22-04-2016 VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 Pfam PF00106 short chain dehydrogenase 7 193 7.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 Gene3D G3DSA:3.40.50.720 4 243 2.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PANTHER PTHR24322 10 134 2.3E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PANTHER PTHR24322 150 181 2.3E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 3.5E-5 T 22-04-2016 VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PANTHER PTHR24322:SF57 10 134 2.3E-34 T 22-04-2016 VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 PANTHER PTHR24322:SF57 150 181 2.3E-34 T 22-04-2016 VPUCM_RS09005 2e02cb3c333c014e5f5d14b7a86af811 264 SUPERFAMILY SSF51735 4 260 3.9E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 Gene3D G3DSA:2.102.10.10 9 191 3.8E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 PANTHER PTHR10134:SF8 1 194 1.2E-114 T 22-04-2016 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 2.4E-74 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 40 1.8E-14 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 SUPERFAMILY SSF50022 30 189 7.26E-43 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 PANTHER PTHR10134 1 194 1.2E-114 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 VPUCM_RS02170 1e27d5550c8736079953e2adabe004c7 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 2.6E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 9.0E-15 T 22-04-2016 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.525 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.4E-64 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.4E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 PANTHER PTHR11661 1 142 8.3E-72 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 Gene3D G3DSA:3.30.1550.10 2 72 2.4E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 Gene3D G3DSA:1.10.10.250 73 141 1.0E-29 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 SUPERFAMILY SSF54747 3 73 1.06E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.7E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VPUCM_RS15240 01b3498404570ece5f10b2e26c0999d1 142 SMART SM00649 9 141 2.1E-81 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PANTHER PTHR11556 4 338 1.3E-187 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.8E-75 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 Gene3D G3DSA:3.40.190.80 199 331 2.6E-60 T 22-04-2016 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PIRSF PIRSF500210 1 336 3.4E-129 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.9E-75 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.15 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 Gene3D G3DSA:3.30.540.10 5 198 1.8E-80 T 22-04-2016 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 PIRSF PIRSF000904 1 337 2.2E-126 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VPUCM_RS01695 75a1b68650bb38d6b3b73a23761e88a3 338 SUPERFAMILY SSF56655 3 331 7.89E-115 T 22-04-2016 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 Gene3D G3DSA:1.10.287.130 372 434 8.1E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 38 279 8.1E-36 T 22-04-2016 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 SUPERFAMILY SSF53850 50 276 1.27E-15 T 22-04-2016 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 Gene3D G3DSA:3.30.565.10 442 594 2.7E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 Gene3D G3DSA:3.40.190.10 126 227 7.7E-4 T 22-04-2016 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 SMART SM00387 484 595 5.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 PANTHER PTHR24423 369 598 3.0E-46 T 22-04-2016 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 PANTHER PTHR24423 340 352 3.0E-46 T 22-04-2016 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 SUPERFAMILY SSF55874 428 593 1.05E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 554 5.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 5.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 573 5.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 592 5.2E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 SUPERFAMILY SSF47384 365 436 3.73E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 593 1.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 SMART SM00388 373 442 4.5E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 375 436 1.6E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 PANTHER PTHR24423:SF497 369 598 3.0E-46 T 22-04-2016 VPUCM_RS10020 1c6942d6ea20b0bb04754b84d43b4a89 600 PANTHER PTHR24423:SF497 340 352 3.0E-46 T 22-04-2016 VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 PANTHER PTHR30445:SF4 3 559 0.0 T 22-04-2016 VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.141 T 22-04-2016 IPR023017 Transport protein YbjL, putative VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 PANTHER PTHR30445 3 559 0.0 T 22-04-2016 VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 Gene3D G3DSA:3.30.70.1450 232 286 5.3E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 SUPERFAMILY SSF116726 231 285 2.75E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.5E-36 T 22-04-2016 IPR006512 YidE/YbjL duplication VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 7.4E-43 T 22-04-2016 IPR006512 YidE/YbjL duplication VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 7.3E-28 T 22-04-2016 IPR006512 YidE/YbjL duplication VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 1.7E-37 T 22-04-2016 IPR006512 YidE/YbjL duplication VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS09860 a732d9fde2d3435ded1e3dcf5f279ed0 560 Gene3D G3DSA:3.30.70.1450 308 377 7.6E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 593 2.5E-151 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 337 586 4.9E-82 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 SUPERFAMILY SSF82866 402 598 8.37E-44 T 22-04-2016 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PANTHER PTHR30081 1 162 8.0E-220 T 22-04-2016 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PANTHER PTHR30081 216 274 8.0E-220 T 22-04-2016 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PANTHER PTHR30081 305 605 8.0E-220 T 22-04-2016 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 Pfam PF02355 Protein export membrane protein 425 586 1.1E-17 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 Pfam PF13721 SecD export protein N-terminal TM region 1 92 5.6E-28 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 606 47.25 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PRINTS PR00702 Acriflavin resistance protein family signature 495 519 4.1E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 4.1E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PRINTS PR00702 Acriflavin resistance protein family signature 570 593 4.1E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 Gene3D G3DSA:1.20.1640.10 422 597 5.7E-24 T 22-04-2016 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PANTHER PTHR30081:SF1 1 162 8.0E-220 T 22-04-2016 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PANTHER PTHR30081:SF1 216 274 8.0E-220 T 22-04-2016 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 PANTHER PTHR30081:SF1 305 605 8.0E-220 T 22-04-2016 VPUCM_RS02920 9ac7b52faa55cf1eca3444f71385fcbf 607 Pfam PF07549 SecD/SecF GG Motif 105 130 2.1E-7 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VPUCM_RS14595 7563c43cb61344f9d5624402b37b1d4d 263 PANTHER PTHR31136:SF2 6 262 7.3E-129 T 22-04-2016 VPUCM_RS14595 7563c43cb61344f9d5624402b37b1d4d 263 SMART SM01150 3 262 1.9E-118 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 VPUCM_RS14595 7563c43cb61344f9d5624402b37b1d4d 263 PANTHER PTHR31136 6 262 7.3E-129 T 22-04-2016 VPUCM_RS14595 7563c43cb61344f9d5624402b37b1d4d 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 261 3.2E-47 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 VPUCM_RS14650 d86873025b996ea215ad63c45d8800fd 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site VPUCM_RS14650 d86873025b996ea215ad63c45d8800fd 141 Pfam PF02082 Transcriptional regulator 1 82 3.7E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type VPUCM_RS14650 d86873025b996ea215ad63c45d8800fd 141 PANTHER PTHR33221:SF4 2 138 5.8E-66 T 22-04-2016 VPUCM_RS14650 d86873025b996ea215ad63c45d8800fd 141 Gene3D G3DSA:1.10.10.10 1 133 1.3E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14650 d86873025b996ea215ad63c45d8800fd 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 4.0E-37 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type VPUCM_RS14650 d86873025b996ea215ad63c45d8800fd 141 SUPERFAMILY SSF46785 2 131 4.69E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14650 d86873025b996ea215ad63c45d8800fd 141 PANTHER PTHR33221 2 138 5.8E-66 T 22-04-2016 VPUCM_RS14650 d86873025b996ea215ad63c45d8800fd 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.924 T 22-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 SMART SM00344 8 115 5.0E-40 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 Gene3D G3DSA:3.30.70.920 71 145 4.4E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 PANTHER PTHR30154:SF2 1 154 8.3E-62 T 22-04-2016 VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 SUPERFAMILY SSF46785 7 68 2.03E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 Gene3D G3DSA:1.10.10.10 5 59 9.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 7.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 PANTHER PTHR30154 1 154 8.3E-62 T 22-04-2016 VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.3E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.3E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS00375 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.3E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 PANTHER PTHR33695 12 169 3.1E-54 T 22-04-2016 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 8.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 8.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 8.3E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 Pfam PF01252 Signal peptidase (SPase) II 19 161 4.7E-37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 PANTHER PTHR33695:SF1 12 169 3.1E-54 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.653 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VPUCM_RS02620 21616f5d4ab57f83aeafd54717aaa7c4 169 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 5.0E-49 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VPUCM_RS10155 c876ee75fd892a0aef41b1172d2fd6fc 223 PANTHER PTHR31088 2 222 8.0E-109 T 22-04-2016 VPUCM_RS10155 c876ee75fd892a0aef41b1172d2fd6fc 223 Pfam PF04012 PspA/IM30 family 2 217 8.0E-61 T 22-04-2016 IPR007157 PspA/IM30 VPUCM_RS10155 c876ee75fd892a0aef41b1172d2fd6fc 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 3.0E-94 T 22-04-2016 IPR014319 Phage shock protein, PspA VPUCM_RS10155 c876ee75fd892a0aef41b1172d2fd6fc 223 PANTHER PTHR31088:SF7 2 222 8.0E-109 T 22-04-2016 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 SMART SM00493 2 125 3.5E-28 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 Gene3D G3DSA:3.40.50.140 3 154 2.0E-45 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 Pfam PF01751 Toprim domain 4 132 1.2E-16 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 Gene3D G3DSA:1.10.460.10 495 612 5.5E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 Gene3D G3DSA:1.10.460.10 160 218 5.5E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 Pfam PF01131 DNA topoisomerase 159 598 5.4E-118 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 SUPERFAMILY SSF56712 3 612 1.7E-184 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 Gene3D G3DSA:2.70.20.10 374 493 3.8E-44 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 Gene3D G3DSA:2.70.20.10 219 256 3.8E-44 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PANTHER PTHR11390 1 508 1.2E-178 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PANTHER PTHR11390 526 611 1.2E-178 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 SMART SM00437 284 563 9.4E-90 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 SMART SM00436 129 224 1.1E-30 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 628 2.1E-239 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PANTHER PTHR11390:SF21 1 508 1.2E-178 T 22-04-2016 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 PANTHER PTHR11390:SF21 526 611 1.2E-178 T 22-04-2016 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VPUCM_RS11110 ee24fd05b344e484e889d3654b36a10d 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 651 64.345 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SMART SM00267 472 644 8.4E-40 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SMART SM00028 296 329 10.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SMART SM00028 216 249 91.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SMART SM00028 256 289 0.0078 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SMART SM00028 376 409 27.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SMART SM00028 336 369 51.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SMART SM00028 179 212 400.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 Pfam PF13424 Tetratricopeptide repeat 218 288 7.4E-10 T 22-04-2016 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 Gene3D G3DSA:1.25.40.10 110 231 1.4E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 Gene3D G3DSA:1.25.40.10 232 416 3.1E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 PANTHER PTHR10098 185 400 6.9E-24 T 22-04-2016 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SUPERFAMILY SSF48452 91 240 1.02E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 Pfam PF00990 Diguanylate cyclase, GGDEF domain 483 639 8.6E-34 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 Gene3D G3DSA:3.30.70.270 485 642 4.0E-37 T 22-04-2016 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SUPERFAMILY SSF55073 488 642 3.14E-34 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 642 8.4E-38 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 Pfam PF13176 Tetratricopeptide repeat 381 409 0.012 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS08530 a147e882a405aaf0168a53da1051551c 658 SUPERFAMILY SSF48452 195 419 4.55E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS03775 068cdd56a2c553575f83543e46274ed2 227 Pfam PF04231 Endonuclease I 53 226 1.1E-36 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 VPUCM_RS03775 068cdd56a2c553575f83543e46274ed2 227 SUPERFAMILY SSF54060 23 227 1.01E-79 T 22-04-2016 VPUCM_RS03775 068cdd56a2c553575f83543e46274ed2 227 PANTHER PTHR33607 5 227 1.6E-36 T 22-04-2016 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.40.190.10 198 277 2.3E-27 T 22-04-2016 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 PANTHER PTHR21022:SF0 1 383 2.2E-158 T 22-04-2016 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 PIRSF PIRSF001500 1 384 5.4E-143 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.30.70.260 299 381 3.0E-28 T 22-04-2016 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 Pfam PF00800 Prephenate dehydratase 110 291 3.7E-60 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 PANTHER PTHR21022 1 383 2.2E-158 T 22-04-2016 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF53850 109 295 3.8E-56 T 22-04-2016 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.40.190.10 111 197 1.6E-31 T 22-04-2016 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 7.1E-27 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 Pfam PF01817 Chorismate mutase type II 12 91 2.8E-16 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:1.20.59.10 4 110 1.5E-40 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF48600 7 95 7.51E-19 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 SMART SM00830 12 93 1.4E-21 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF55021 284 381 2.37E-26 T 22-04-2016 VPUCM_RS02720 b59f8a53ea2bc8ae2de550875455e6e9 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 600 606 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF55008 2 62 1.96E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Pfam PF00702 haloacid dehalogenase-like hydrolase 594 810 5.6E-48 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 329 905 6.1E-183 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Gene3D G3DSA:2.70.150.10 329 496 2.4E-30 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF81665 497 592 1.14E-9 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF81665 362 400 1.14E-9 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF81665 845 862 1.14E-9 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Pfam PF00122 E1-E2 ATPase 367 588 6.6E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Pfam PF00403 Heavy-metal-associated domain 6 61 4.0E-7 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Pfam PF00403 Heavy-metal-associated domain 177 236 7.7E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF81653 399 496 2.75E-25 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 368 874 1.1E-92 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PANTHER PTHR24093 173 906 0.0 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Gene3D G3DSA:3.30.70.100 66 125 1.4E-6 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 ProSitePatterns PS01047 Heavy-metal-associated domain. 177 206 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF56784 596 616 1.56E-60 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF56784 654 902 1.56E-60 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00943 Copper-transporting ATPase signature 869 883 2.0E-13 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00943 Copper-transporting ATPase signature 519 533 2.0E-13 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00943 Copper-transporting ATPase signature 187 201 2.0E-13 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00943 Copper-transporting ATPase signature 386 404 2.0E-13 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00943 Copper-transporting ATPase signature 581 596 2.0E-13 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00943 Copper-transporting ATPase signature 217 237 2.0E-13 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00943 Copper-transporting ATPase signature 314 333 2.0E-13 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00943 Copper-transporting ATPase signature 773 790 2.0E-13 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PANTHER PTHR24093:SF319 173 906 0.0 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Gene3D G3DSA:3.30.70.100 5 62 2.1E-9 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Gene3D G3DSA:3.40.1110.10 618 723 2.4E-20 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF55008 167 240 1.06E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Gene3D G3DSA:3.40.50.1000 724 864 1.7E-54 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Gene3D G3DSA:3.40.50.1000 570 614 1.7E-54 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 SUPERFAMILY SSF55008 65 125 2.75E-6 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 819 831 1.3E-27 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 732 1.3E-27 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 796 815 1.3E-27 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 743 753 1.3E-27 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 612 1.3E-27 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 446 460 1.3E-27 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 Gene3D G3DSA:3.30.70.100 171 257 5.3E-22 T 22-04-2016 VPUCM_RS12220 4afef603ede959c60759c990aa7ae5ad 911 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 310 906 5.3E-183 T 22-04-2016 VPUCM_RS14155 4e93d66c4210e096a7b326a9869f2952 483 SUPERFAMILY SSF53067 40 154 2.33E-11 T 22-04-2016 VPUCM_RS14155 4e93d66c4210e096a7b326a9869f2952 483 PIRSF PIRSF028153 1 483 1.0E-235 T 22-04-2016 IPR016871 MSHA biogenesis protein, MshI VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 PANTHER PTHR30522:SF0 5 263 1.6E-122 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 PANTHER PTHR30522 5 263 1.6E-122 T 22-04-2016 VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 Gene3D G3DSA:1.10.287.1080 134 222 3.4E-13 T 22-04-2016 VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 Gene3D G3DSA:1.10.287.1080 7 73 1.7E-8 T 22-04-2016 VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 1.6E-102 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 3.1E-28 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 233 8.3E-6 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 SUPERFAMILY SSF101386 138 237 8.41E-24 T 22-04-2016 VPUCM_RS13280 c1b42f8910b4832d30aa007656f68798 263 SUPERFAMILY SSF101386 3 105 5.52E-25 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 Pfam PF00271 Helicase conserved C-terminal domain 457 582 8.5E-12 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 SUPERFAMILY SSF52540 77 279 8.92E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 SUPERFAMILY SSF52540 446 617 1.06E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 SMART SM00490 509 582 1.1E-8 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 Gene3D G3DSA:3.40.50.300 82 263 1.1E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 Pfam PF00176 SNF2 family N-terminal domain 107 285 5.7E-15 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 PANTHER PTHR10799:SF576 420 442 9.9E-54 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 PANTHER PTHR10799:SF576 102 387 9.9E-54 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 PANTHER PTHR10799:SF576 466 612 9.9E-54 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 PANTHER PTHR10799:SF576 814 864 9.9E-54 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 Gene3D G3DSA:3.40.50.300 448 611 1.9E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 SUPERFAMILY SSF52540 203 272 1.06E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 PANTHER PTHR10799 420 442 9.9E-54 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 PANTHER PTHR10799 102 387 9.9E-54 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 PANTHER PTHR10799 466 612 9.9E-54 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 PANTHER PTHR10799 814 864 9.9E-54 T 22-04-2016 VPUCM_RS05850 24b2262163c59e1aba2d235b39edad56 891 SMART SM00487 84 291 2.2E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 Pfam PF01472 PUA domain 286 360 2.0E-23 T 22-04-2016 IPR002478 PUA domain GO:0003723 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 267 35.709 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 Gene3D G3DSA:2.30.130.10 284 375 6.1E-24 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 Pfam PF00696 Amino acid kinase family 15 243 2.3E-41 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 SUPERFAMILY SSF53633 15 265 6.15E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 SUPERFAMILY SSF88697 286 376 6.08E-25 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 Gene3D G3DSA:3.40.1160.10 11 268 6.3E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 PIRSF PIRSF000729 9 378 5.0E-137 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 PANTHER PTHR11063 14 379 2.0E-134 T 22-04-2016 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 SMART SM00359 286 369 4.1E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 9.1E-148 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VPUCM_RS12725 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.3E-53 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VPUCM_RS12625 72e58971648216fa4146bebdcea90da1 250 Pfam PF01223 DNA/RNA non-specific endonuclease 24 231 4.0E-58 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VPUCM_RS12625 72e58971648216fa4146bebdcea90da1 250 SMART SM00477 41 232 2.2E-65 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 VPUCM_RS12625 72e58971648216fa4146bebdcea90da1 250 PANTHER PTHR13966 23 240 3.3E-56 T 22-04-2016 VPUCM_RS12625 72e58971648216fa4146bebdcea90da1 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 100 108 - T 22-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 VPUCM_RS12625 72e58971648216fa4146bebdcea90da1 250 Gene3D G3DSA:3.40.570.10 20 248 9.9E-73 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 VPUCM_RS12625 72e58971648216fa4146bebdcea90da1 250 SMART SM00892 40 232 3.8E-64 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 VPUCM_RS12625 72e58971648216fa4146bebdcea90da1 250 SUPERFAMILY SSF54060 33 240 6.47E-71 T 22-04-2016 VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 PANTHER PTHR11751 3 338 6.6E-96 T 22-04-2016 VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 Pfam PF00155 Aminotransferase class I and II 42 337 1.1E-55 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 8.5E-118 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 PANTHER PTHR11751:SF398 3 338 6.6E-96 T 22-04-2016 VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 SUPERFAMILY SSF53383 10 343 3.58E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 52.938 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 Gene3D G3DSA:3.90.1150.10 251 344 1.3E-10 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS06130 a3260b1ba2ed15c72dfe94cc7efeed8c 346 Gene3D G3DSA:3.40.640.10 40 250 8.0E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS15405 b5cfbdadbe5d9ffca382a4afe1f4e96b 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 9.2E-20 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VPUCM_RS15405 b5cfbdadbe5d9ffca382a4afe1f4e96b 136 PANTHER PTHR35091 15 136 1.4E-36 T 22-04-2016 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF55681 3 254 1.34E-108 T 22-04-2016 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF50447 454 551 1.38E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.1E-224 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 2.9E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 PANTHER PTHR11777:SF9 1 860 0.0 T 22-04-2016 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 SMART SM00863 652 695 1.4E-22 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF55186 551 710 7.19E-54 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF02272 DHHA1 domain 786 852 2.7E-17 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.855 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 PANTHER PTHR11777 1 860 0.0 T 22-04-2016 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 Gene3D G3DSA:3.30.930.10 3 251 6.0E-124 T 22-04-2016 VPUCM_RS13205 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF101353 255 460 4.45E-60 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 PANTHER PTHR33525:SF4 3 368 3.0E-130 T 22-04-2016 VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 PANTHER PTHR33525 3 368 3.0E-130 T 22-04-2016 VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 Gene3D G3DSA:3.20.20.450 78 181 4.0E-13 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 Pfam PF00563 EAL domain 64 190 1.4E-15 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 SMART SM00052 2 195 7.3E-4 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 PIRSF PIRSF003180 1 403 1.4E-170 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 Pfam PF08668 HDOD domain 205 325 4.4E-13 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 Gene3D G3DSA:1.10.3150.10 182 399 3.3E-32 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 SUPERFAMILY SSF109604 181 400 2.04E-43 T 22-04-2016 VPUCM_RS06165 d757b5088aac2b5bba95d9777393dab3 404 SUPERFAMILY SSF141868 5 193 7.06E-29 T 22-04-2016 IPR001633 EAL domain VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 SUPERFAMILY SSF58014 44 142 2.75E-29 T 22-04-2016 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 SUPERFAMILY SSF51064 143 198 4.84E-20 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 PANTHER PTHR21237 24 198 7.2E-65 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 Pfam PF01025 GrpE 35 198 8.5E-52 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 Gene3D G3DSA:3.90.20.20 42 141 6.7E-33 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.757 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 Gene3D G3DSA:2.30.22.10 142 198 1.1E-27 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 PRINTS PR00773 GrpE protein signature 177 196 3.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 PRINTS PR00773 GrpE protein signature 67 83 3.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 PRINTS PR00773 GrpE protein signature 95 110 3.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03290 831c78b0ade2d3765ec4d2c03c392f2d 198 PRINTS PR00773 GrpE protein signature 150 165 3.4E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS10180 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.7E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS10180 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Gene3D G3DSA:3.40.50.300 2 260 2.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10180 66b0d84e4f2a23df0429cbf3ce5e3c90 331 PANTHER PTHR24220 5 328 6.3E-204 T 22-04-2016 VPUCM_RS10180 66b0d84e4f2a23df0429cbf3ce5e3c90 331 SUPERFAMILY SSF52540 4 268 2.41E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10180 66b0d84e4f2a23df0429cbf3ce5e3c90 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.9E-21 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS10180 66b0d84e4f2a23df0429cbf3ce5e3c90 331 SMART SM00382 32 237 2.5E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10180 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Pfam PF00005 ABC transporter 24 187 7.8E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS10180 66b0d84e4f2a23df0429cbf3ce5e3c90 331 PANTHER PTHR24220:SF514 5 328 6.3E-204 T 22-04-2016 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 SUPERFAMILY SSF50249 1 67 5.78E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PANTHER PTHR11544:SF52 1 71 9.4E-42 T 22-04-2016 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PIRSF PIRSF002599 1 72 4.8E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 SMART SM00357 3 67 7.8E-25 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PANTHER PTHR11544 1 71 9.4E-42 T 22-04-2016 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.6E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 Gene3D G3DSA:2.40.50.140 1 65 1.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 2.8E-41 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PRINTS PR00050 Cold shock protein signature 40 58 8.3E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PRINTS PR00050 Cold shock protein signature 4 19 8.3E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VPUCM_RS10905 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PRINTS PR00050 Cold shock protein signature 25 34 8.3E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 PANTHER PTHR30181 1 621 0.0 T 22-04-2016 VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 9.3E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 Gene3D G3DSA:3.40.930.10 507 645 1.6E-43 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 5.1E-12 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 6.4E-19 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 8.1E-170 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 PANTHER PTHR30181:SF2 1 621 0.0 T 22-04-2016 VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 Gene3D G3DSA:3.40.50.10370 382 477 4.0E-42 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 SUPERFAMILY SSF52794 385 472 3.49E-25 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VPUCM_RS01960 9f1c5e20b08c5d32fcd4953afab6edb1 650 SUPERFAMILY SSF55804 506 645 2.22E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.6E-138 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 7.7E-47 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 SUPERFAMILY SSF55347 149 312 3.43E-78 T 22-04-2016 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 SMART SM00846 3 150 2.3E-97 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 PIRSF PIRSF000149 1 331 4.9E-135 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 2.2E-70 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 Gene3D G3DSA:3.40.50.720 1 158 3.2E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 3.4E-61 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 SUPERFAMILY SSF51735 3 166 2.5E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 Gene3D G3DSA:3.30.360.10 159 314 3.3E-85 T 22-04-2016 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS11150 159f7a7c412671e303d7ae823fd6252f 331 PANTHER PTHR10836 1 331 6.3E-241 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 SUPERFAMILY SSF55021 297 394 1.41E-20 T 22-04-2016 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 SUPERFAMILY SSF53633 6 293 1.27E-77 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 SUPERFAMILY SSF55021 377 449 5.67E-16 T 22-04-2016 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 Pfam PF00696 Amino acid kinase family 6 278 2.5E-48 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 PANTHER PTHR21499:SF3 6 450 2.2E-146 T 22-04-2016 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 PANTHER PTHR21499 6 450 2.2E-146 T 22-04-2016 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 PIRSF PIRSF000726 2 450 5.5E-131 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.0E-123 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 3.6E-123 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 Gene3D G3DSA:3.40.1160.10 6 53 1.7E-61 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14200 54f817c2bece183e2e582b955f73ad37 450 Gene3D G3DSA:3.40.1160.10 107 294 1.7E-61 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS02420 c98e087d5d06ec8eb652c3bfdc4516d6 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 2.7E-19 T 22-04-2016 IPR021710 Protein of unknown function DUF3293 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PANTHER PTHR24423 317 368 1.2E-51 T 22-04-2016 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PANTHER PTHR24423:SF497 451 644 1.2E-51 T 22-04-2016 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 368 9.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 Gene3D G3DSA:1.10.287.130 335 387 1.6E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PANTHER PTHR24423:SF497 317 368 1.2E-51 T 22-04-2016 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PANTHER PTHR24423:SF497 1 12 1.2E-51 T 22-04-2016 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 SMART SM00387 528 641 1.8E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 SUPERFAMILY SSF52172 3 135 2.33E-6 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 SMART SM00100 176 301 0.0017 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 SUPERFAMILY SSF47384 335 374 1.2E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 Gene3D G3DSA:2.60.120.10 202 311 1.1E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PANTHER PTHR24423 451 644 1.2E-51 T 22-04-2016 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PANTHER PTHR24423 1 12 1.2E-51 T 22-04-2016 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 SUPERFAMILY SSF51206 201 311 1.31E-20 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 1.4E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 Gene3D G3DSA:3.40.50.2300 5 129 4.6E-6 T 22-04-2016 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 Gene3D G3DSA:3.30.565.10 486 641 3.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 1.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 1.8E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS09800 630143bf8f5de1d69304273917055e92 646 SUPERFAMILY SSF55874 480 639 1.96E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 1.8E-28 T 22-04-2016 IPR004477 ComEC/Rec2-related protein VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 676 2.5E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 PANTHER PTHR30619:SF2 1 748 3.8E-159 T 22-04-2016 VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 PANTHER PTHR30619 1 748 3.8E-159 T 22-04-2016 VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 Gene3D G3DSA:3.60.15.10 490 715 2.0E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 137 718 1.1E-118 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 Pfam PF03772 Competence protein 208 466 1.2E-51 T 22-04-2016 IPR004477 ComEC/Rec2-related protein VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 SUPERFAMILY SSF56281 494 741 2.3E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS05520 4678e6004e96e270c03d83fbc2a8d39a 752 SMART SM00849 506 689 5.5E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS08930 af3ad5cbd966d09c7de80cb757ea6da1 222 SUPERFAMILY SSF81901 47 170 1.22E-15 T 22-04-2016 VPUCM_RS08930 af3ad5cbd966d09c7de80cb757ea6da1 222 PANTHER PTHR11102 47 172 1.0E-14 T 22-04-2016 VPUCM_RS08930 af3ad5cbd966d09c7de80cb757ea6da1 222 Pfam PF08238 Sel1 repeat 130 164 0.0051 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS08930 af3ad5cbd966d09c7de80cb757ea6da1 222 Pfam PF08238 Sel1 repeat 62 92 0.5 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS08930 af3ad5cbd966d09c7de80cb757ea6da1 222 SMART SM00671 62 93 6.9 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS08930 af3ad5cbd966d09c7de80cb757ea6da1 222 SMART SM00671 129 165 0.019 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS08930 af3ad5cbd966d09c7de80cb757ea6da1 222 Gene3D G3DSA:1.25.40.10 47 172 5.9E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 Gene3D G3DSA:1.10.8.60 505 578 1.3E-13 T 22-04-2016 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 PANTHER PTHR32071:SF16 286 637 7.7E-79 T 22-04-2016 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 Pfam PF00989 PAS fold 221 308 2.9E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 Pfam PF02954 Bacterial regulatory protein, Fis family 591 632 1.1E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 Pfam PF00158 Sigma-54 interaction domain 342 495 1.4E-32 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 Gene3D G3DSA:3.30.450.20 219 308 5.1E-9 T 22-04-2016 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 PANTHER PTHR32071 286 637 7.7E-79 T 22-04-2016 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 SUPERFAMILY SSF52540 342 574 1.84E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 SUPERFAMILY SSF55785 220 307 1.47E-7 T 22-04-2016 IPR000014 PAS domain VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 Gene3D G3DSA:1.10.10.60 580 634 5.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 Gene3D G3DSA:3.40.50.300 337 504 3.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 418 433 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 SUPERFAMILY SSF46689 581 634 9.86E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS01945 85fe9d041c21fee3dbb8f82244e37248 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 362 375 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 PANTHER PTHR10799 10 33 5.2E-19 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 614 1.8E-34 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 1.3E-13 T 22-04-2016 IPR000014 PAS domain VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 Gene3D G3DSA:1.20.5.170 26 72 7.2E-28 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 SUPERFAMILY SSF55785 352 462 3.59E-19 T 22-04-2016 IPR000014 PAS domain VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 Pfam PF13426 PAS domain 352 453 4.3E-10 T 22-04-2016 IPR000014 PAS domain VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 Pfam PF02743 Cache domain 38 289 1.4E-15 T 22-04-2016 IPR033479 Double Cache domain 1 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 SUPERFAMILY SSF103190 207 298 8.63E-26 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 PANTHER PTHR10799:SF750 10 33 5.2E-19 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 PANTHER PTHR10799:SF750 500 616 5.2E-19 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 SUPERFAMILY SSF103190 36 206 1.1E-47 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 Gene3D G3DSA:3.30.450.20 73 204 9.9E-43 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 Gene3D G3DSA:3.30.450.20 207 301 3.3E-29 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 Gene3D G3DSA:3.30.450.20 346 455 3.0E-15 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 Gene3D G3DSA:3.30.70.270 467 620 2.3E-41 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 9.4E-38 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 SMART SM00267 454 619 8.1E-46 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 PANTHER PTHR10799 500 616 5.2E-19 T 22-04-2016 VPUCM_RS01885 17c1e7cffcd1ca1a05d887a6fa2fc066 626 SUPERFAMILY SSF55073 470 618 5.1E-38 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 PANTHER PTHR33154 7 96 3.9E-21 T 22-04-2016 VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 SMART SM00418 5 83 6.5E-24 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 7.4E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 PANTHER PTHR33154:SF4 7 96 3.9E-21 T 22-04-2016 VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 22-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 Gene3D G3DSA:1.10.10.10 5 86 9.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 SUPERFAMILY SSF46785 5 85 1.47E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.2E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.2E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 5.2E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS15510 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 5.2E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 PRINTS PR00301 70kDa heat shock protein signature 22 35 5.1E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 PRINTS PR00301 70kDa heat shock protein signature 240 250 5.1E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 PRINTS PR00301 70kDa heat shock protein signature 173 193 5.1E-7 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 Pfam PF00012 Hsp70 protein 24 348 6.9E-16 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 SUPERFAMILY SSF53067 22 215 9.78E-27 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 PANTHER PTHR19375:SF176 93 348 1.3E-50 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 PANTHER PTHR19375:SF176 21 77 1.3E-50 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 234 247 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 PANTHER PTHR19375 93 348 1.3E-50 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 PANTHER PTHR19375 21 77 1.3E-50 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 Gene3D G3DSA:3.30.420.40 241 333 1.6E-18 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 Gene3D G3DSA:3.30.420.40 151 240 3.6E-31 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 Gene3D G3DSA:3.30.420.40 23 112 3.6E-31 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 SUPERFAMILY SSF53067 229 379 2.22E-26 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 SUPERFAMILY SSF53067 432 491 2.22E-26 T 22-04-2016 VPUCM_RS07795 bc7759fafb92aafc7e5430641198f5b2 650 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 26 33 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS05390 a60ea442ff13947c98664dfcea5c303b 1200 SUPERFAMILY SSF52540 62 104 2.41E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05390 a60ea442ff13947c98664dfcea5c303b 1200 SUPERFAMILY SSF52540 232 265 2.41E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05390 a60ea442ff13947c98664dfcea5c303b 1200 Gene3D G3DSA:3.40.50.300 232 280 1.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05390 a60ea442ff13947c98664dfcea5c303b 1200 Gene3D G3DSA:3.40.50.300 36 104 1.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05390 a60ea442ff13947c98664dfcea5c303b 1200 SUPERFAMILY SSF52540 250 366 8.12E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05390 a60ea442ff13947c98664dfcea5c303b 1200 SUPERFAMILY SSF52540 52 127 8.12E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05390 a60ea442ff13947c98664dfcea5c303b 1200 Gene3D G3DSA:3.40.50.300 840 900 1.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05390 a60ea442ff13947c98664dfcea5c303b 1200 Gene3D G3DSA:3.40.50.300 775 794 1.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00855 665edd365ffe0a1992eb8f6110b34cbf 347 Gene3D G3DSA:1.10.3720.10 136 340 1.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00855 665edd365ffe0a1992eb8f6110b34cbf 347 PANTHER PTHR30325 1 347 2.8E-112 T 22-04-2016 VPUCM_RS00855 665edd365ffe0a1992eb8f6110b34cbf 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 4.8E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00855 665edd365ffe0a1992eb8f6110b34cbf 347 SUPERFAMILY SSF161098 139 325 5.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 Pfam PF13353 4Fe-4S single cluster domain 21 145 2.5E-7 T 22-04-2016 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 Pfam PF04055 Radical SAM superfamily 29 225 6.2E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 SUPERFAMILY SSF102114 83 277 7.65E-10 T 22-04-2016 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 PANTHER PTHR30352:SF13 12 64 1.1E-101 T 22-04-2016 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 PANTHER PTHR30352:SF13 98 278 1.1E-101 T 22-04-2016 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 286 1.6E-124 T 22-04-2016 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 Gene3D G3DSA:3.30.70.20 49 93 9.0E-10 T 22-04-2016 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 PANTHER PTHR30352 12 64 1.1E-101 T 22-04-2016 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 PANTHER PTHR30352 98 278 1.1E-101 T 22-04-2016 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 PIRSF PIRSF000371 1 293 1.3E-100 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 SUPERFAMILY SSF54862 28 145 1.06E-16 T 22-04-2016 VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS07710 2a0745605f194b4e0777da8c269d3152 293 Gene3D G3DSA:3.80.30.10 118 279 3.2E-36 T 22-04-2016 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 SUPERFAMILY SSF52172 3 186 1.18E-36 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 SUPERFAMILY SSF46689 457 505 4.39E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 Pfam PF00072 Response regulator receiver domain 5 114 3.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 PANTHER PTHR32071:SF33 439 508 1.6E-175 T 22-04-2016 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 PANTHER PTHR32071:SF33 1 393 1.6E-175 T 22-04-2016 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 Gene3D G3DSA:1.10.10.60 459 500 7.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 Pfam PF00158 Sigma-54 interaction domain 143 308 2.5E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 Gene3D G3DSA:3.40.50.2300 2 124 8.5E-30 T 22-04-2016 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 SMART SM00448 3 114 9.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 SUPERFAMILY SSF52540 142 385 6.41E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 Gene3D G3DSA:3.40.50.300 139 314 6.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 Gene3D G3DSA:1.10.8.60 315 393 1.4E-23 T 22-04-2016 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 Pfam PF02954 Bacterial regulatory protein, Fis family 464 500 2.8E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 PANTHER PTHR32071 439 508 1.6E-175 T 22-04-2016 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 PANTHER PTHR32071 1 393 1.6E-175 T 22-04-2016 VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS07525 e9c41772ce8551c83912c611c0ad2f81 514 SMART SM00382 162 304 3.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.1E-45 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 Gene3D G3DSA:1.20.120.220 94 267 4.9E-60 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 PANTHER PTHR11410:SF7 32 119 6.4E-102 T 22-04-2016 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 PANTHER PTHR11410:SF7 135 270 6.4E-102 T 22-04-2016 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 PANTHER PTHR11410 32 119 6.4E-102 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 PANTHER PTHR11410 135 270 6.4E-102 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 Pfam PF00119 ATP synthase A chain 44 262 3.3E-58 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS16040 db2470a72f9ae4c0f613fc2abc1c8de6 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.223 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VPUCM_RS14515 e4804df6c9002d929b7e6b9c7e300a2d 131 PANTHER PTHR34874:SF1 4 131 9.1E-57 T 22-04-2016 VPUCM_RS14515 e4804df6c9002d929b7e6b9c7e300a2d 131 PANTHER PTHR34874 4 131 9.1E-57 T 22-04-2016 VPUCM_RS14515 e4804df6c9002d929b7e6b9c7e300a2d 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 5.6E-55 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VPUCM_RS14515 e4804df6c9002d929b7e6b9c7e300a2d 131 Gene3D G3DSA:3.40.1260.10 6 131 2.9E-32 T 22-04-2016 IPR027396 DsrEFH-like VPUCM_RS14515 e4804df6c9002d929b7e6b9c7e300a2d 131 SUPERFAMILY SSF75169 6 131 1.02E-38 T 22-04-2016 IPR027396 DsrEFH-like VPUCM_RS14515 e4804df6c9002d929b7e6b9c7e300a2d 131 Pfam PF02635 DsrE/DsrF-like family 6 131 6.6E-28 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VPUCM_RS02030 6fbb8bf7901dd24093636a555ac906d0 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 1.1E-49 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VPUCM_RS02030 6fbb8bf7901dd24093636a555ac906d0 203 SMART SM01207 10 185 1.5E-82 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VPUCM_RS02030 6fbb8bf7901dd24093636a555ac906d0 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.834 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VPUCM_RS02030 6fbb8bf7901dd24093636a555ac906d0 203 PANTHER PTHR30309 1 202 1.2E-90 T 22-04-2016 VPUCM_RS02030 6fbb8bf7901dd24093636a555ac906d0 203 PANTHER PTHR30309:SF0 1 202 1.2E-90 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VPUCM_RS02030 6fbb8bf7901dd24093636a555ac906d0 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 3.8E-73 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VPUCM_RS20250 8a4ce9b6663ca2f23003720e329cc979 146 Pfam PF05940 NnrS protein 18 146 1.3E-39 T 22-04-2016 IPR010266 NnrS VPUCM_RS08670 78e476d4c64da98703ab5964dc2c06df 123 SUPERFAMILY SSF69635 2 121 8.63E-46 T 22-04-2016 VPUCM_RS08670 78e476d4c64da98703ab5964dc2c06df 123 Pfam PF05932 Tir chaperone protein (CesT) family 9 117 2.5E-6 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VPUCM_RS08670 78e476d4c64da98703ab5964dc2c06df 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 2.9E-47 T 22-04-2016 IPR012673 Type III secretion system chaperone SycN GO:0009306 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 4.1E-276 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 SUPERFAMILY SSF54991 703 800 3.27E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 9.4E-29 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Pfam PF03483 B3/4 domain 212 385 1.6E-71 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 PANTHER PTHR10947:SF0 2 800 0.0 T 22-04-2016 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 PANTHER PTHR10947 2 800 0.0 T 22-04-2016 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Pfam PF01588 Putative tRNA binding domain 45 145 8.1E-26 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 SUPERFAMILY SSF46955 403 475 1.19E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 SUPERFAMILY SSF56037 196 394 7.06E-78 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Gene3D G3DSA:3.30.56.20 402 475 4.6E-26 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 SUPERFAMILY SSF55681 467 695 6.46E-49 T 22-04-2016 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Gene3D G3DSA:3.30.70.380 709 800 2.3E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 SMART SM00896 707 800 6.4E-45 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 4.3E-18 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 SMART SM00874 403 471 4.8E-29 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 SUPERFAMILY SSF50249 38 196 1.37E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Gene3D G3DSA:3.30.930.10 496 695 4.3E-63 T 22-04-2016 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Gene3D G3DSA:3.30.56.10 155 184 2.6E-25 T 22-04-2016 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Gene3D G3DSA:3.30.56.10 1 38 2.6E-25 T 22-04-2016 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Gene3D G3DSA:3.50.40.10 198 392 2.5E-86 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 46.786 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 Gene3D G3DSA:2.40.50.140 42 154 1.5E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS09565 ec82b0293d84aa565d593e7c973a8a54 801 SMART SM00873 212 385 9.6E-100 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VPUCM_RS13505 0b000ecf8ed146ead46e92c4dd81dbaa 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.3E-51 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 VPUCM_RS13505 0b000ecf8ed146ead46e92c4dd81dbaa 187 PANTHER PTHR30327:SF1 1 187 2.4E-69 T 22-04-2016 VPUCM_RS13505 0b000ecf8ed146ead46e92c4dd81dbaa 187 SUPERFAMILY SSF143456 1 187 8.37E-68 T 22-04-2016 VPUCM_RS13505 0b000ecf8ed146ead46e92c4dd81dbaa 187 Gene3D G3DSA:3.30.70.1300 42 130 3.2E-29 T 22-04-2016 VPUCM_RS13505 0b000ecf8ed146ead46e92c4dd81dbaa 187 Gene3D G3DSA:3.40.1740.10 131 178 2.1E-37 T 22-04-2016 VPUCM_RS13505 0b000ecf8ed146ead46e92c4dd81dbaa 187 Gene3D G3DSA:3.40.1740.10 2 40 2.1E-37 T 22-04-2016 VPUCM_RS13505 0b000ecf8ed146ead46e92c4dd81dbaa 187 PANTHER PTHR30327 1 187 2.4E-69 T 22-04-2016 VPUCM_RS13505 0b000ecf8ed146ead46e92c4dd81dbaa 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.625 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 VPUCM_RS02255 53bdb271ad4b661972b10e636b32399f 398 PANTHER PTHR30474:SF2 3 398 1.9E-178 T 22-04-2016 VPUCM_RS02255 53bdb271ad4b661972b10e636b32399f 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VPUCM_RS02255 53bdb271ad4b661972b10e636b32399f 398 Pfam PF01098 Cell cycle protein 26 381 1.2E-113 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VPUCM_RS02255 53bdb271ad4b661972b10e636b32399f 398 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 22 390 41.489 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VPUCM_RS02255 53bdb271ad4b661972b10e636b32399f 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 7.4E-129 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VPUCM_RS02255 53bdb271ad4b661972b10e636b32399f 398 PANTHER PTHR30474 3 398 1.9E-178 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VPUCM_RS15755 60cec6dbd989c0aec373ce339a4ba87c 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.092 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VPUCM_RS15755 60cec6dbd989c0aec373ce339a4ba87c 255 PANTHER PTHR34266 1 253 6.4E-157 T 22-04-2016 VPUCM_RS15755 60cec6dbd989c0aec373ce339a4ba87c 255 Gene3D G3DSA:3.20.20.70 1 252 2.1E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS15755 60cec6dbd989c0aec373ce339a4ba87c 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 1.3E-109 T 22-04-2016 VPUCM_RS15755 60cec6dbd989c0aec373ce339a4ba87c 255 SUPERFAMILY SSF110399 1 236 1.44E-85 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 PANTHER PTHR10169:SF30 1 526 0.0 T 22-04-2016 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 22-04-2016 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 SUPERFAMILY SSF56719 33 485 1.07E-156 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 SMART SM00434 13 463 4.8E-234 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 SUPERFAMILY SSF101904 499 743 1.31E-50 T 22-04-2016 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 PANTHER PTHR10169 1 526 0.0 T 22-04-2016 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 Gene3D G3DSA:2.120.10.90 498 735 2.5E-26 T 22-04-2016 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 635 0.16 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.2E-137 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 Gene3D G3DSA:3.30.1360.40 240 333 8.2E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 Gene3D G3DSA:3.90.199.10 335 399 4.8E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 Gene3D G3DSA:3.90.199.10 32 239 4.8E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VPUCM_RS02135 2bb4f3969add9462425c73bfa2c5e1e7 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.953 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS13935 c5b82f9d6e5fbd92b77d387134ee0b2b 162 Pfam PF02470 MlaD protein 39 118 7.9E-20 T 22-04-2016 IPR003399 Mce/MlaD VPUCM_RS13935 c5b82f9d6e5fbd92b77d387134ee0b2b 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.2E-54 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VPUCM_RS13935 c5b82f9d6e5fbd92b77d387134ee0b2b 162 PANTHER PTHR33371 1 157 1.9E-43 T 22-04-2016 VPUCM_RS12305 62d8079bf60ed555693242a6a70acff4 203 PANTHER PTHR30634 4 203 2.8E-32 T 22-04-2016 VPUCM_RS12305 62d8079bf60ed555693242a6a70acff4 203 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 3 200 3.1E-37 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VPUCM_RS12305 62d8079bf60ed555693242a6a70acff4 203 Pfam PF03550 Outer membrane lipoprotein LolB 43 199 2.9E-43 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VPUCM_RS12305 62d8079bf60ed555693242a6a70acff4 203 Gene3D G3DSA:2.50.20.10 12 201 3.9E-61 T 22-04-2016 VPUCM_RS12305 62d8079bf60ed555693242a6a70acff4 203 SUPERFAMILY SSF89392 18 201 5.89E-49 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VPUCM_RS12305 62d8079bf60ed555693242a6a70acff4 203 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 201 26.528 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VPUCM_RS12305 62d8079bf60ed555693242a6a70acff4 203 PANTHER PTHR30634:SF11 4 203 2.8E-32 T 22-04-2016 VPUCM_RS12490 51363ff43e561d81f80806e0335ef16f 105 Gene3D G3DSA:3.30.460.10 4 105 1.8E-38 T 22-04-2016 VPUCM_RS12490 51363ff43e561d81f80806e0335ef16f 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.5E-39 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VPUCM_RS12490 51363ff43e561d81f80806e0335ef16f 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.3E-28 T 22-04-2016 VPUCM_RS12490 51363ff43e561d81f80806e0335ef16f 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.401 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VPUCM_RS12490 51363ff43e561d81f80806e0335ef16f 105 SUPERFAMILY SSF81301 5 105 3.6E-38 T 22-04-2016 VPUCM_RS12490 51363ff43e561d81f80806e0335ef16f 105 PANTHER PTHR21043 4 105 1.9E-42 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 Gene3D G3DSA:3.40.50.720 2 180 6.6E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 Gene3D G3DSA:1.10.1040.10 181 433 3.7E-113 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 5.4E-51 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 SMART SM01350 179 469 5.6E-215 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 SUPERFAMILY SSF48179 177 472 6.8E-127 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 PIRSF PIRSF000109 1 477 1.0E-241 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 PANTHER PTHR11811 1 482 7.1E-299 T 22-04-2016 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 1.5E-234 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 SUPERFAMILY SSF51735 4 174 6.37E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 Gene3D G3DSA:1.20.5.320 435 481 1.2E-26 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS08875 79169b73f481a4b8ce7f6de52b069452 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 1.1E-124 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 22-04-2016 IPR020845 AMP-binding, conserved site VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 Gene3D G3DSA:3.40.50.980 4 177 1.4E-35 T 22-04-2016 VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 3.7E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 PANTHER PTHR24096 2 507 1.1E-179 T 22-04-2016 VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 Gene3D G3DSA:3.30.300.30 411 508 6.5E-31 T 22-04-2016 VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 SUPERFAMILY SSF56801 4 509 2.62E-160 T 22-04-2016 VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 Gene3D G3DSA:3.40.50.980 178 336 4.1E-49 T 22-04-2016 VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 Gene3D G3DSA:2.30.38.10 337 407 3.2E-29 T 22-04-2016 VPUCM_RS06320 d0abc57f03388a35f2a76d831d89370e 513 Pfam PF00501 AMP-binding enzyme 8 416 1.0E-114 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 SMART SM00448 16 127 8.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 SUPERFAMILY SSF52172 16 199 2.42E-38 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 Pfam PF00072 Response regulator receiver domain 18 127 7.5E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 SUPERFAMILY SSF46689 426 475 2.06E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 Gene3D G3DSA:1.10.10.60 424 475 5.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 PANTHER PTHR32071:SF18 1 474 9.6E-208 T 22-04-2016 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 PANTHER PTHR32071 1 474 9.6E-208 T 22-04-2016 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 Gene3D G3DSA:1.10.8.60 327 386 6.7E-17 T 22-04-2016 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 8.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 8.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 SUPERFAMILY SSF52540 154 384 3.92E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 Gene3D G3DSA:3.40.50.300 152 326 5.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 SMART SM00382 175 321 2.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 Gene3D G3DSA:3.40.50.2300 15 148 6.9E-32 T 22-04-2016 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 Pfam PF00158 Sigma-54 interaction domain 155 321 1.2E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS07935 04109ac5a0f87437abe7462f634bb94d 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 1.0E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 214 9.7E-88 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.42 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 PANTHER PTHR11264:SF10 6 224 1.3E-161 T 22-04-2016 VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 SMART SM00986 49 210 5.5E-40 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 7.3E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 Gene3D G3DSA:3.40.470.10 4 222 4.6E-103 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 SMART SM00987 49 210 5.5E-40 T 22-04-2016 VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 SUPERFAMILY SSF52141 4 222 4.86E-97 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VPUCM_RS02460 babe5d4bd326c1bcb5b0197bdab83076 226 PANTHER PTHR11264 6 224 1.3E-161 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 Pfam PF00849 RNA pseudouridylate synthase 68 201 6.7E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 SMART SM00363 3 61 3.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 Gene3D G3DSA:3.10.290.10 3 59 8.7E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 Pfam PF01479 S4 domain 4 43 4.1E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 SUPERFAMILY SSF55174 4 96 5.72E-12 T 22-04-2016 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 PANTHER PTHR21600:SF2 1 309 1.7E-100 T 22-04-2016 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 7.2E-55 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 PANTHER PTHR21600 1 309 1.7E-100 T 22-04-2016 VPUCM_RS06380 2f7ac4df8b19b4c386c13dea0d7667a3 312 SUPERFAMILY SSF55120 68 237 1.3E-42 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS01795 818c00d1b3a77c4062e2f04a511d5735 126 Gene3D G3DSA:2.60.40.1470 5 125 2.1E-45 T 22-04-2016 IPR007474 ApaG domain VPUCM_RS01795 818c00d1b3a77c4062e2f04a511d5735 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.563 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG VPUCM_RS01795 818c00d1b3a77c4062e2f04a511d5735 126 Pfam PF04379 Protein of unknown function (DUF525) 18 103 1.5E-33 T 22-04-2016 IPR007474 ApaG domain VPUCM_RS01795 818c00d1b3a77c4062e2f04a511d5735 126 PANTHER PTHR14289 5 122 6.7E-50 T 22-04-2016 VPUCM_RS01795 818c00d1b3a77c4062e2f04a511d5735 126 SUPERFAMILY SSF110069 5 126 1.06E-46 T 22-04-2016 IPR007474 ApaG domain VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Gene3D G3DSA:3.40.50.300 754 900 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Gene3D G3DSA:3.40.50.300 463 596 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Gene3D G3DSA:1.10.3170.10 170 362 1.2E-61 T 22-04-2016 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Pfam PF13361 UvrD-like helicase C-terminal domain 456 839 1.4E-17 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Gene3D G3DSA:1.10.486.10 599 753 1.5E-50 T 22-04-2016 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 SUPERFAMILY SSF52980 925 1208 9.12E-87 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070:SF23 819 1202 0.0 T 22-04-2016 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070:SF23 529 799 0.0 T 22-04-2016 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070:SF23 133 230 0.0 T 22-04-2016 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070:SF23 19 104 0.0 T 22-04-2016 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070:SF23 313 501 0.0 T 22-04-2016 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Gene3D G3DSA:3.90.320.10 916 1209 5.0E-101 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Gene3D G3DSA:3.40.50.300 135 164 3.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Gene3D G3DSA:3.40.50.300 23 97 3.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Gene3D G3DSA:3.40.50.300 363 462 3.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 19 1207 15.196 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070 819 1202 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070 529 799 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070 133 230 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070 19 104 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 PANTHER PTHR11070 313 501 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Pfam PF00580 UvrD/REP helicase N-terminal domain 23 449 9.4E-60 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 22 1206 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 SUPERFAMILY SSF52540 133 217 9.48E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 SUPERFAMILY SSF52540 820 867 9.48E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 SUPERFAMILY SSF52540 28 95 9.48E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 SUPERFAMILY SSF52540 338 790 9.48E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04350 9091d63281b2cda9ab7c606ed0b4a4c6 1224 Pfam PF12705 PD-(D/E)XK nuclease superfamily 982 1206 2.1E-7 T 22-04-2016 VPUCM_RS12005 b2f6c62d25a60cb996fe25e8004a950b 259 SUPERFAMILY SSF52540 1 250 1.23E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12005 b2f6c62d25a60cb996fe25e8004a950b 259 Gene3D G3DSA:3.40.50.300 1 254 9.4E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12005 b2f6c62d25a60cb996fe25e8004a950b 259 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 252 1.1E-68 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ VPUCM_RS12005 b2f6c62d25a60cb996fe25e8004a950b 259 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 249 1.4E-45 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 590 1.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 SMART SM00387 483 593 4.2E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 Gene3D G3DSA:3.30.565.10 443 591 2.5E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 440 3.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 SUPERFAMILY SSF47384 367 440 1.73E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 SUPERFAMILY SSF103190 48 187 7.85E-29 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PIRSF PIRSF036431 1 599 1.1E-192 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 Pfam PF02743 Cache domain 37 223 3.9E-12 T 22-04-2016 IPR033479 Double Cache domain 1 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 SUPERFAMILY SSF55874 440 592 3.14E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 Gene3D G3DSA:1.10.287.130 372 436 2.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 SMART SM00388 372 440 1.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 2.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PANTHER PTHR24423:SF451 349 591 2.2E-130 T 22-04-2016 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PANTHER PTHR24423:SF451 82 179 2.2E-130 T 22-04-2016 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PANTHER PTHR24423 349 591 2.2E-130 T 22-04-2016 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 PANTHER PTHR24423 82 179 2.2E-130 T 22-04-2016 VPUCM_RS05110 c916ffe5c3b7f6052cd2866d9f7ab85e 600 Gene3D G3DSA:3.30.450.20 63 183 7.5E-6 T 22-04-2016 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 22-04-2016 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 7.8E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 55 117 1.1E-30 T 22-04-2016 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 PANTHER PTHR10986 2 117 9.2E-67 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 22-04-2016 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 PANTHER PTHR10986:SF12 2 117 9.2E-67 T 22-04-2016 VPUCM_RS09610 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 Gene3D G3DSA:3.30.1130.10 21 136 1.1E-45 T 22-04-2016 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 PANTHER PTHR34354 2 281 1.0E-103 T 22-04-2016 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 PIRSF PIRSF004750 6 281 5.3E-131 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 SUPERFAMILY SSF55620 184 267 5.86E-10 T 22-04-2016 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 PANTHER PTHR34354:SF1 2 281 1.0E-103 T 22-04-2016 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 Gene3D G3DSA:3.30.1130.10 144 280 1.0E-56 T 22-04-2016 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.8E-128 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 9.8E-49 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 165.609 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS12600 6a8ded38b40087dd6af1e58380331505 281 Pfam PF14489 QueF-like protein 194 270 5.5E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1375 10.461 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 SMART SM00663 235 514 1.1E-184 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.4E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 SUPERFAMILY SSF64484 1133 1363 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 1302 1379 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 1176 1261 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.40.20 417 489 2.5E-37 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.40.20 349 376 2.5E-37 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.327 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-27 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 961 1157 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 3.5E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376 961 1157 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.3E-19 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.50.100 1156 1209 7.0E-8 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 1302 1379 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 PANTHER PTHR19376:SF32 1176 1261 0.0 T 22-04-2016 VPUCM_RS15215 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.6E-87 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS04510 e6b0afabf43a4b8a0c964113e40466ab 77 Pfam PF04400 Protein of unknown function (DUF539) 22 63 1.7E-21 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM VPUCM_RS04510 e6b0afabf43a4b8a0c964113e40466ab 77 PANTHER PTHR40691 2 76 1.1E-28 T 22-04-2016 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 57 67 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 Pfam PF01168 Alanine racemase, N-terminal domain 33 256 3.4E-46 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 TIGRFAM TIGR00492 alr: alanine racemase 29 378 1.2E-65 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 SUPERFAMILY SSF50621 257 391 2.13E-39 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 SMART SM01005 264 392 1.5E-45 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 Gene3D G3DSA:2.40.37.10 246 391 1.7E-45 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PANTHER PTHR30511:SF0 23 392 1.0E-109 T 22-04-2016 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 Gene3D G3DSA:3.20.20.10 36 245 7.2E-47 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 Hamap MF_01201 Alanine racemase. 26 392 24.937 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 SUPERFAMILY SSF51419 33 264 1.96E-44 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PANTHER PTHR30511 23 392 1.0E-109 T 22-04-2016 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PRINTS PR00992 Alanine racemase signature 229 256 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PRINTS PR00992 Alanine racemase signature 52 68 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PRINTS PR00992 Alanine racemase signature 297 312 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PRINTS PR00992 Alanine racemase signature 150 162 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PRINTS PR00992 Alanine racemase signature 318 335 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PRINTS PR00992 Alanine racemase signature 88 106 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 PRINTS PR00992 Alanine racemase signature 186 197 5.0E-32 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS14910 b45aa91d740045b1e919659840a9f8e2 392 Pfam PF00842 Alanine racemase, C-terminal domain 265 391 2.0E-27 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 SMART SM00304 219 270 0.0012 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 441 3.9E-28 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 PANTHER PTHR33121:SF13 404 700 4.5E-68 T 22-04-2016 VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 PANTHER PTHR33121:SF13 123 144 4.5E-68 T 22-04-2016 VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 Gene3D G3DSA:3.30.70.270 277 448 5.6E-40 T 22-04-2016 VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 436 2.6E-29 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 Gene3D G3DSA:3.20.20.450 456 703 6.0E-89 T 22-04-2016 IPR001633 EAL domain VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 SUPERFAMILY SSF55073 281 444 2.67E-33 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 Pfam PF00672 HAMP domain 199 265 3.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 Pfam PF00563 EAL domain 458 694 3.2E-71 T 22-04-2016 IPR001633 EAL domain VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 PANTHER PTHR33121 404 700 4.5E-68 T 22-04-2016 VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 PANTHER PTHR33121 123 144 4.5E-68 T 22-04-2016 VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 SMART SM00267 265 442 1.0E-28 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 SUPERFAMILY SSF141868 466 705 7.19E-83 T 22-04-2016 IPR001633 EAL domain VPUCM_RS09105 6edec7632becd44ef2975bdde1e535f7 719 SMART SM00052 452 699 9.7E-106 T 22-04-2016 IPR001633 EAL domain VPUCM_RS12520 66e1d0bf8c501313dd8b653cc1aa075d 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.375 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 VPUCM_RS12520 66e1d0bf8c501313dd8b653cc1aa075d 92 Gene3D G3DSA:3.30.70.1460 8 92 3.2E-36 T 22-04-2016 IPR027471 YbeD-like domain VPUCM_RS12520 66e1d0bf8c501313dd8b653cc1aa075d 92 SUPERFAMILY SSF117991 7 92 3.66E-31 T 22-04-2016 IPR027471 YbeD-like domain VPUCM_RS12520 66e1d0bf8c501313dd8b653cc1aa075d 92 PANTHER PTHR38036 4 92 1.5E-42 T 22-04-2016 VPUCM_RS12520 66e1d0bf8c501313dd8b653cc1aa075d 92 PANTHER PTHR38036:SF1 4 92 1.5E-42 T 22-04-2016 VPUCM_RS12520 66e1d0bf8c501313dd8b653cc1aa075d 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 1.8E-29 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 VPUCM_RS06700 c900ee3c060b17825b73b4548f0fd598 453 Gene3D G3DSA:3.30.1330.90 10 157 5.0E-53 T 22-04-2016 IPR029009 Allosteric substrate binding domain VPUCM_RS06700 c900ee3c060b17825b73b4548f0fd598 453 PANTHER PTHR30182 1 453 0.0 T 22-04-2016 VPUCM_RS06700 c900ee3c060b17825b73b4548f0fd598 453 SUPERFAMILY SSF143548 16 157 2.09E-44 T 22-04-2016 IPR029009 Allosteric substrate binding domain VPUCM_RS06700 c900ee3c060b17825b73b4548f0fd598 453 PANTHER PTHR30182:SF5 1 453 0.0 T 22-04-2016 VPUCM_RS06700 c900ee3c060b17825b73b4548f0fd598 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.1E-98 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit VPUCM_RS06700 c900ee3c060b17825b73b4548f0fd598 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.3E-54 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VPUCM_RS06700 c900ee3c060b17825b73b4548f0fd598 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.6E-227 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VPUCM_RS23425 9250572611667ad2851283ed55cae485 187 Pfam PF03222 Tryptophan/tyrosine permease family 1 177 2.7E-48 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VPUCM_RS23425 9250572611667ad2851283ed55cae485 187 PANTHER PTHR32195 1 187 9.8E-77 T 22-04-2016 VPUCM_RS23425 9250572611667ad2851283ed55cae485 187 PANTHER PTHR32195:SF17 1 187 9.8E-77 T 22-04-2016 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 SUPERFAMILY SSF47807 165 257 2.99E-21 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 SMART SM00475 3 254 4.9E-72 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 PANTHER PTHR10133 1 253 3.7E-154 T 22-04-2016 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 Gene3D G3DSA:1.10.150.20 180 239 2.4E-20 T 22-04-2016 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 SMART SM00279 167 202 7.7E-10 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 Gene3D G3DSA:3.40.50.1010 4 179 7.1E-49 T 22-04-2016 IPR029060 PIN domain-like VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 SUPERFAMILY SSF88723 4 164 1.03E-39 T 22-04-2016 IPR029060 PIN domain-like VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 PANTHER PTHR10133:SF39 1 253 3.7E-154 T 22-04-2016 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 3.1E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 2.1E-31 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VPUCM_RS12620 0f46cd27b73988107c853cd894deea03 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.947 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 VPUCM_RS08105 7311a258885d483262b41c7f3fcf891e 286 PANTHER PTHR30193:SF10 4 286 3.1E-126 T 22-04-2016 VPUCM_RS08105 7311a258885d483262b41c7f3fcf891e 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 4.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08105 7311a258885d483262b41c7f3fcf891e 286 SUPERFAMILY SSF161098 10 275 2.49E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08105 7311a258885d483262b41c7f3fcf891e 286 Gene3D G3DSA:1.10.3720.10 7 272 1.8E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08105 7311a258885d483262b41c7f3fcf891e 286 PANTHER PTHR30193 4 286 3.1E-126 T 22-04-2016 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 Pfam PF00672 HAMP domain 156 225 4.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 SMART SM00388 230 296 4.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 448 3.0E-118 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 SMART SM00304 176 229 2.0E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 448 4.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 PANTHER PTHR24423 170 448 1.1E-88 T 22-04-2016 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 3.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 3.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 3.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 3.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 SUPERFAMILY SSF55874 285 449 1.44E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 Gene3D G3DSA:3.30.565.10 302 450 4.9E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 Gene3D G3DSA:1.10.287.130 220 292 1.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 SUPERFAMILY SSF47384 214 295 4.32E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 SMART SM00387 339 451 9.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 1.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS01920 dceb7ae3a151bfba29f6d18326bd1af0 461 PANTHER PTHR24423:SF354 170 448 1.1E-88 T 22-04-2016 VPUCM_RS01080 d330cda98c5b6bf50c0a7a4c2072da79 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.2E-124 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VPUCM_RS01080 d330cda98c5b6bf50c0a7a4c2072da79 313 SUPERFAMILY SSF51735 1 308 1.36E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01080 d330cda98c5b6bf50c0a7a4c2072da79 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 54.499 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VPUCM_RS01080 d330cda98c5b6bf50c0a7a4c2072da79 313 PANTHER PTHR10366:SF469 1 308 5.8E-113 T 22-04-2016 VPUCM_RS01080 d330cda98c5b6bf50c0a7a4c2072da79 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 4.4E-44 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VPUCM_RS01080 d330cda98c5b6bf50c0a7a4c2072da79 313 Gene3D G3DSA:3.90.25.10 177 294 5.2E-37 T 22-04-2016 VPUCM_RS01080 d330cda98c5b6bf50c0a7a4c2072da79 313 Gene3D G3DSA:3.40.50.720 2 176 1.1E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01080 d330cda98c5b6bf50c0a7a4c2072da79 313 PANTHER PTHR10366 1 308 5.8E-113 T 22-04-2016 VPUCM_RS15735 4abb12192e19df1d624f72b2d79c12b1 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 370 2.8E-69 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VPUCM_RS15735 4abb12192e19df1d624f72b2d79c12b1 386 Gene3D G3DSA:1.20.1250.20 200 372 2.3E-6 T 22-04-2016 VPUCM_RS15735 4abb12192e19df1d624f72b2d79c12b1 386 Gene3D G3DSA:1.20.1250.20 2 184 2.3E-33 T 22-04-2016 VPUCM_RS15735 4abb12192e19df1d624f72b2d79c12b1 386 PANTHER PTHR23502 1 371 5.9E-109 T 22-04-2016 VPUCM_RS15735 4abb12192e19df1d624f72b2d79c12b1 386 PANTHER PTHR23502:SF19 1 371 5.9E-109 T 22-04-2016 VPUCM_RS15735 4abb12192e19df1d624f72b2d79c12b1 386 Pfam PF07690 Major Facilitator Superfamily 5 341 1.3E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS15735 4abb12192e19df1d624f72b2d79c12b1 386 SUPERFAMILY SSF103473 2 372 4.05E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS15735 4abb12192e19df1d624f72b2d79c12b1 386 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VPUCM_RS10765 f863b3d85396396f5f857d1aba49a0f1 323 PANTHER PTHR10108:SF847 53 322 4.9E-134 T 22-04-2016 VPUCM_RS10765 f863b3d85396396f5f857d1aba49a0f1 323 SUPERFAMILY SSF53335 91 323 1.94E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10765 f863b3d85396396f5f857d1aba49a0f1 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 4.9E-173 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like VPUCM_RS10765 f863b3d85396396f5f857d1aba49a0f1 323 Gene3D G3DSA:3.40.50.150 96 311 1.0E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10765 f863b3d85396396f5f857d1aba49a0f1 323 PANTHER PTHR10108 53 322 4.9E-134 T 22-04-2016 VPUCM_RS10765 f863b3d85396396f5f857d1aba49a0f1 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 13 322 54.493 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VPUCM_RS10765 f863b3d85396396f5f857d1aba49a0f1 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 2.0E-147 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 3.7E-31 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:3.30.450.20 98 196 1.4E-10 T 22-04-2016 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 7.5E-6 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 SMART SM00388 205 272 1.7E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:1.10.287.130 197 258 2.0E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF55785 86 196 1.15E-11 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF47384 192 271 1.55E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 SMART SM00091 98 166 3.4E-6 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 SMART SM00387 317 429 3.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 PANTHER PTHR24423:SF554 1 432 9.6E-216 T 22-04-2016 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 4.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF55874 261 427 3.27E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:3.30.565.10 259 426 3.1E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 Pfam PF00989 PAS fold 99 165 6.0E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 1.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 2.6E-138 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VPUCM_RS02825 63682423614ce8271673d42018fafffa 432 PANTHER PTHR24423 1 432 9.6E-216 T 22-04-2016 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 PANTHER PTHR22573:SF52 18 543 9.8E-281 T 22-04-2016 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 PANTHER PTHR22573 18 543 9.8E-281 T 22-04-2016 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 9.0E-9 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 Gene3D G3DSA:3.40.120.10 225 317 5.2E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 Gene3D G3DSA:3.40.120.10 318 441 2.0E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.6E-28 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 SUPERFAMILY SSF55957 433 543 1.26E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 Gene3D G3DSA:3.30.310.50 466 543 1.4E-31 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 SUPERFAMILY SSF53738 27 235 2.83E-52 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 SUPERFAMILY SSF53738 305 446 6.67E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 4.7E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 Gene3D G3DSA:3.40.120.10 30 224 4.2E-61 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 SUPERFAMILY SSF53738 209 317 2.59E-8 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS11835 d7cc37fff0c5ca22a776ea61b36c5f71 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 1.4E-40 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 Gene3D G3DSA:3.30.70.260 1 68 1.8E-6 T 22-04-2016 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 Gene3D G3DSA:3.40.50.300 202 376 4.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 SUPERFAMILY SSF46689 461 512 1.02E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 PANTHER PTHR32071:SF3 3 514 5.2E-176 T 22-04-2016 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 SUPERFAMILY SSF55785 81 171 7.8E-10 T 22-04-2016 IPR000014 PAS domain VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 Gene3D G3DSA:1.10.10.60 461 513 5.3E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 SMART SM00091 80 146 7.8E-7 T 22-04-2016 IPR000014 PAS domain VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 SMART SM00382 225 368 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 Pfam PF00989 PAS fold 83 130 4.4E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 Pfam PF00158 Sigma-54 interaction domain 206 370 4.4E-57 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 Gene3D G3DSA:3.30.450.20 79 173 2.0E-8 T 22-04-2016 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 PANTHER PTHR32071 3 514 5.2E-176 T 22-04-2016 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.0E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 Gene3D G3DSA:1.10.8.60 377 449 5.6E-16 T 22-04-2016 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 SUPERFAMILY SSF52540 205 445 2.27E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 SUPERFAMILY SSF55021 1 68 1.02E-6 T 22-04-2016 VPUCM_RS06750 95f8ab227d1aac6035e995c834381689 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS14940 7acc987846c5cfb1b3d894594f338ce7 460 PIRSF PIRSF006603 6 459 4.7E-133 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS14940 7acc987846c5cfb1b3d894594f338ce7 460 PANTHER PTHR11206:SF142 13 456 4.8E-231 T 22-04-2016 VPUCM_RS14940 7acc987846c5cfb1b3d894594f338ce7 460 PANTHER PTHR11206 13 456 4.8E-231 T 22-04-2016 VPUCM_RS14940 7acc987846c5cfb1b3d894594f338ce7 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 423 9.9E-58 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS14940 7acc987846c5cfb1b3d894594f338ce7 460 Pfam PF01554 MatE 255 416 5.0E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS14940 7acc987846c5cfb1b3d894594f338ce7 460 Pfam PF01554 MatE 32 191 1.7E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS05085 ff3b8200d6c032962c5483aa20db062a 332 PIRSF PIRSF006470 1 332 5.4E-124 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VPUCM_RS05085 ff3b8200d6c032962c5483aa20db062a 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 1.6E-104 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VPUCM_RS05085 ff3b8200d6c032962c5483aa20db062a 332 PANTHER PTHR33376:SF7 12 332 4.2E-160 T 22-04-2016 VPUCM_RS05085 ff3b8200d6c032962c5483aa20db062a 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 276 5.6E-80 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VPUCM_RS05085 ff3b8200d6c032962c5483aa20db062a 332 PANTHER PTHR33376 12 332 4.2E-160 T 22-04-2016 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 PANTHER PTHR24031 626 667 1.0E-129 T 22-04-2016 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 PANTHER PTHR24031 299 603 1.0E-129 T 22-04-2016 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 PANTHER PTHR24031 259 282 1.0E-129 T 22-04-2016 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 1.0E-18 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 SUPERFAMILY SSF52540 508 653 4.42E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 SUPERFAMILY SSF52540 292 342 4.42E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 9.1E-239 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 SUPERFAMILY SSF50249 9 174 3.08E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 Gene3D G3DSA:2.40.50.140 47 142 1.3E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 SUPERFAMILY SSF52540 200 453 1.35E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 SMART SM00487 265 459 3.3E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 Gene3D G3DSA:3.40.50.300 454 638 3.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 7.5E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 SMART SM00490 505 589 1.7E-21 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 PANTHER PTHR24031:SF249 626 667 1.0E-129 T 22-04-2016 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 PANTHER PTHR24031:SF249 299 603 1.0E-129 T 22-04-2016 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 PANTHER PTHR24031:SF249 259 282 1.0E-129 T 22-04-2016 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 Gene3D G3DSA:3.40.50.300 256 453 2.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 Gene3D G3DSA:1.10.150.20 4 37 2.3E-5 T 22-04-2016 VPUCM_RS00790 691873f300d3f82aaf52affc58f576bc 693 Pfam PF17191 RecG wedge domain 14 172 2.8E-21 T 22-04-2016 IPR033454 RecG, wedge domain VPUCM_RS02995 d797423c22e7eccd3ff1a5aaefa8c149 316 SMART SM00530 19 80 7.8E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS02995 d797423c22e7eccd3ff1a5aaefa8c149 316 PANTHER PTHR34475:SF1 1 315 2.0E-46 T 22-04-2016 VPUCM_RS02995 d797423c22e7eccd3ff1a5aaefa8c149 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 4.7E-26 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 VPUCM_RS02995 d797423c22e7eccd3ff1a5aaefa8c149 316 SUPERFAMILY SSF47413 14 79 4.79E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS02995 d797423c22e7eccd3ff1a5aaefa8c149 316 PANTHER PTHR34475 1 315 2.0E-46 T 22-04-2016 VPUCM_RS02995 d797423c22e7eccd3ff1a5aaefa8c149 316 Pfam PF13413 Helix-turn-helix domain 20 78 1.2E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS02995 d797423c22e7eccd3ff1a5aaefa8c149 316 Gene3D G3DSA:1.10.260.40 14 82 5.3E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS07745 2cdf2a950daa896e0939749277303bf8 374 Pfam PF13487 HD domain 249 304 2.3E-9 T 22-04-2016 VPUCM_RS07745 2cdf2a950daa896e0939749277303bf8 374 Gene3D G3DSA:3.30.450.40 13 152 2.8E-4 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS07745 2cdf2a950daa896e0939749277303bf8 374 Gene3D G3DSA:1.10.3210.10 295 323 5.1E-7 T 22-04-2016 IPR006674 HD domain VPUCM_RS07745 2cdf2a950daa896e0939749277303bf8 374 Gene3D G3DSA:1.10.3210.10 159 262 5.1E-7 T 22-04-2016 IPR006674 HD domain VPUCM_RS07745 2cdf2a950daa896e0939749277303bf8 374 SUPERFAMILY SSF55781 13 138 7.85E-6 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS07745 2cdf2a950daa896e0939749277303bf8 374 SUPERFAMILY SSF109604 174 352 7.85E-14 T 22-04-2016 VPUCM_RS15495 65803fb6fa0892939be85e87681c7e09 405 PANTHER PTHR23547 1 398 1.0E-179 T 22-04-2016 VPUCM_RS15495 65803fb6fa0892939be85e87681c7e09 405 SUPERFAMILY SSF103473 9 399 6.41E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS15495 65803fb6fa0892939be85e87681c7e09 405 Gene3D G3DSA:1.20.1250.20 11 201 7.1E-16 T 22-04-2016 VPUCM_RS15495 65803fb6fa0892939be85e87681c7e09 405 PANTHER PTHR23547:SF1 1 398 1.0E-179 T 22-04-2016 VPUCM_RS15495 65803fb6fa0892939be85e87681c7e09 405 Pfam PF07690 Major Facilitator Superfamily 18 334 3.6E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS15495 65803fb6fa0892939be85e87681c7e09 405 Gene3D G3DSA:1.20.1250.20 217 399 6.4E-8 T 22-04-2016 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 SUPERFAMILY SSF53748 3 382 4.48E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 Pfam PF00162 Phosphoglycerate kinase 6 373 1.1E-136 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PIRSF PIRSF000724 1 386 4.4E-134 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.313 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 Gene3D G3DSA:3.40.50.1260 5 174 9.5E-65 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.9E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 Gene3D G3DSA:3.40.50.1270 175 371 4.3E-79 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS13445 386471d494c7dd86b74663bba0bb7ced 386 PANTHER PTHR11406 1 386 4.3E-195 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VPUCM_RS01015 91af47810113f1af137ff66af2bbee57 236 PANTHER PTHR10730:SF27 3 177 3.9E-14 T 22-04-2016 VPUCM_RS01015 91af47810113f1af137ff66af2bbee57 236 PANTHER PTHR10730 3 177 3.9E-14 T 22-04-2016 VPUCM_RS01015 91af47810113f1af137ff66af2bbee57 236 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 171 5.5E-39 T 22-04-2016 IPR002654 Glycosyl transferase, family 25 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 PANTHER PTHR11469:SF11 1 550 0.0 T 22-04-2016 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 294 507 4.6E-149 T 22-04-2016 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 9 99 4.6E-149 T 22-04-2016 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.181 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 SUPERFAMILY SSF53697 6 548 2.72E-226 T 22-04-2016 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 PANTHER PTHR11469 1 550 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 Pfam PF00342 Phosphoglucose isomerase 53 542 2.9E-255 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:1.10.1390.10 508 548 1.1E-21 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14295 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 100 291 2.3E-90 T 22-04-2016 VPUCM_RS01815 14e3bbdd756e1bbf1fdde1d4c4957f55 781 Gene3D G3DSA:2.60.450.10 50 205 1.1E-22 T 22-04-2016 VPUCM_RS01815 14e3bbdd756e1bbf1fdde1d4c4957f55 781 Pfam PF04453 Organic solvent tolerance protein 297 682 3.0E-112 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VPUCM_RS01815 14e3bbdd756e1bbf1fdde1d4c4957f55 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 9 753 20.75 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VPUCM_RS01815 14e3bbdd756e1bbf1fdde1d4c4957f55 781 Pfam PF03968 OstA-like protein 58 189 2.8E-17 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VPUCM_RS01815 14e3bbdd756e1bbf1fdde1d4c4957f55 781 PANTHER PTHR30189 53 781 8.2E-101 T 22-04-2016 VPUCM_RS06830 59514d71daa9e41753bfb9da8b24eeed 179 SUPERFAMILY SSF52540 11 177 8.26E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06830 59514d71daa9e41753bfb9da8b24eeed 179 Pfam PF13671 AAA domain 13 141 2.1E-12 T 22-04-2016 VPUCM_RS06830 59514d71daa9e41753bfb9da8b24eeed 179 Gene3D G3DSA:3.40.50.300 11 175 5.6E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 TIGRFAM TIGR01707 gspI: type II secretion system protein I 20 117 3.0E-36 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 Gene3D G3DSA:3.30.1300.30 46 130 2.6E-29 T 22-04-2016 VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 38 1.3E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 SUPERFAMILY SSF54523 51 129 1.22E-22 T 22-04-2016 VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 Pfam PF02501 Type II secretion system (T2SS), protein I 54 129 2.7E-21 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 Pfam PF13633 Prokaryotic N-terminal methylation site 19 43 1.9E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 PANTHER PTHR38779 14 131 5.5E-41 T 22-04-2016 VPUCM_RS00690 345c74810d629cfe681de7c53f169403 131 PANTHER PTHR38779:SF2 14 131 5.5E-41 T 22-04-2016 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 Gene3D G3DSA:3.40.50.300 3 204 1.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 PANTHER PTHR10285 1 211 1.0E-94 T 22-04-2016 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.464 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 SUPERFAMILY SSF52540 6 204 1.31E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 6.2E-90 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VPUCM_RS10630 2a4e989354cda5a2f53c15715bc70d3f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.3E-41 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 5.0E-39 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 PANTHER PTHR13779:SF25 1 333 9.7E-189 T 22-04-2016 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:1.10.8.60 188 260 1.3E-33 T 22-04-2016 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:1.10.10.10 262 333 2.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SMART SM00382 56 183 4.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 PANTHER PTHR13779 1 333 9.7E-189 T 22-04-2016 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SUPERFAMILY SSF52540 25 256 7.04E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.4E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 9.1E-117 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.6E-147 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SUPERFAMILY SSF46785 262 332 1.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.514 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VPUCM_RS10730 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:3.40.50.300 25 182 1.7E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 SUPERFAMILY SSF56731 122 431 1.05E-109 T 22-04-2016 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 TIGRFAM TIGR01391 dnaG: DNA primase 5 425 4.2E-146 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Hamap MF_00974 DNA primase [dnaG]. 4 582 29.086 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Gene3D G3DSA:3.90.580.10 2 101 1.9E-42 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Gene3D G3DSA:1.10.860.10 443 585 8.3E-55 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 PIRSF PIRSF002811 2 585 1.0E-142 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Gene3D G3DSA:3.40.1360.10 248 374 6.4E-46 T 22-04-2016 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 SMART SM00400 36 90 2.1E-36 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Pfam PF10410 DnaB-helicase binding domain of primase 377 431 8.4E-8 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 PANTHER PTHR30313 3 582 1.1E-158 T 22-04-2016 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Gene3D G3DSA:1.20.50.20 375 432 7.7E-14 T 22-04-2016 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Gene3D G3DSA:3.90.980.10 122 247 1.7E-46 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 2.9E-41 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 SMART SM00766 456 581 2.8E-58 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Pfam PF08278 DNA primase DnaG DnaB-binding 457 580 5.8E-37 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 SUPERFAMILY SSF57783 4 101 4.76E-38 T 22-04-2016 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 SMART SM00493 266 337 1.4E-17 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Pfam PF13155 Toprim-like 270 356 6.5E-14 T 22-04-2016 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 SUPERFAMILY SSF117023 453 584 6.41E-45 T 22-04-2016 VPUCM_RS02005 88652387e1c0d391f4d24a9d819e308e 586 Pfam PF01807 CHC2 zinc finger 6 101 2.4E-41 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VPUCM_RS04210 360623f891f038c27915640c0e2a9c4a 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 1.5E-25 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family VPUCM_RS04210 360623f891f038c27915640c0e2a9c4a 150 SUPERFAMILY SSF51197 1 143 4.67E-24 T 22-04-2016 VPUCM_RS04210 360623f891f038c27915640c0e2a9c4a 150 Gene3D G3DSA:2.60.120.370 4 142 4.4E-15 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.2E-47 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 Pfam PF02082 Transcriptional regulator 1 83 9.5E-28 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.2E-66 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 SUPERFAMILY SSF46785 2 133 1.61E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 PANTHER PTHR33221:SF1 2 152 1.5E-70 T 22-04-2016 VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 PANTHER PTHR33221 2 152 1.5E-70 T 22-04-2016 VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.688 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VPUCM_RS02940 03c277817dbfb7402df89be03fb336cd 168 Gene3D G3DSA:1.10.10.10 1 134 3.8E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06680 8df359356a3d9a6dea6a9d591674e1da 541 SUPERFAMILY SSF58104 224 533 4.71E-61 T 22-04-2016 VPUCM_RS06680 8df359356a3d9a6dea6a9d591674e1da 541 Gene3D G3DSA:1.10.287.950 286 501 3.3E-48 T 22-04-2016 VPUCM_RS06680 8df359356a3d9a6dea6a9d591674e1da 541 SMART SM00304 203 256 1.4E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS06680 8df359356a3d9a6dea6a9d591674e1da 541 SMART SM00283 271 532 3.0E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS06680 8df359356a3d9a6dea6a9d591674e1da 541 PANTHER PTHR32089 149 535 3.3E-151 T 22-04-2016 VPUCM_RS06680 8df359356a3d9a6dea6a9d591674e1da 541 Pfam PF00672 HAMP domain 184 251 1.5E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS06680 8df359356a3d9a6dea6a9d591674e1da 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 531 6.5E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS06680 8df359356a3d9a6dea6a9d591674e1da 541 PANTHER PTHR32089:SF58 149 535 3.3E-151 T 22-04-2016 VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 Gene3D G3DSA:3.30.1490.70 151 184 9.8E-7 T 22-04-2016 VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 Gene3D G3DSA:2.40.50.140 185 277 7.0E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 Pfam PF14743 DNA ligase OB-like domain 212 277 1.0E-26 T 22-04-2016 IPR029319 DNA ligase, OB-like domain VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 Gene3D G3DSA:3.30.470.30 18 149 5.2E-5 T 22-04-2016 VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 Pfam PF01068 ATP dependent DNA ligase domain 45 198 8.2E-8 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 SUPERFAMILY SSF56091 22 198 4.32E-42 T 22-04-2016 VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 SUPERFAMILY SSF50249 173 277 1.77E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 PANTHER PTHR10459:SF61 15 277 5.1E-63 T 22-04-2016 VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 PANTHER PTHR10459 15 277 5.1E-63 T 22-04-2016 VPUCM_RS07555 c1c0f782c78ed930ae04ffbfc0ad800e 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 22-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 SUPERFAMILY SSF52540 151 386 8.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 Gene3D G3DSA:1.10.10.60 418 461 2.3E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 SUPERFAMILY SSF46689 366 461 3.58E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 Gene3D G3DSA:3.40.50.300 152 319 5.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 SMART SM00382 167 311 5.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 SUPERFAMILY SSF52172 13 191 3.42E-23 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 Gene3D G3DSA:1.10.8.60 320 393 4.0E-17 T 22-04-2016 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 Gene3D G3DSA:3.40.50.2300 12 132 1.7E-17 T 22-04-2016 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 8.5E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 463 8.5E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 Pfam PF02954 Bacterial regulatory protein, Fis family 423 460 8.7E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 PANTHER PTHR32071 15 460 7.4E-142 T 22-04-2016 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 Pfam PF00158 Sigma-54 interaction domain 151 313 7.6E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 366 375 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 Pfam PF00072 Response regulator receiver domain 17 124 4.0E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS03870 ba100b45ca2ae216ca8ec3e4d2be408a 463 SMART SM00448 15 126 6.7E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS04465 c29c9a5ee453659f098bee235384177e 102 SUPERFAMILY SSF82657 1 89 1.07E-31 T 22-04-2016 IPR002634 BolA protein VPUCM_RS04465 c29c9a5ee453659f098bee235384177e 102 Gene3D G3DSA:3.30.300.90 1 100 1.0E-32 T 22-04-2016 IPR002634 BolA protein VPUCM_RS04465 c29c9a5ee453659f098bee235384177e 102 PANTHER PTHR12735:SF23 1 102 1.5E-53 T 22-04-2016 VPUCM_RS04465 c29c9a5ee453659f098bee235384177e 102 PIRSF PIRSF003113 1 99 7.6E-37 T 22-04-2016 IPR002634 BolA protein VPUCM_RS04465 c29c9a5ee453659f098bee235384177e 102 PANTHER PTHR12735 1 102 1.5E-53 T 22-04-2016 VPUCM_RS04465 c29c9a5ee453659f098bee235384177e 102 Pfam PF01722 BolA-like protein 10 83 2.5E-30 T 22-04-2016 IPR002634 BolA protein VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82866 794 1009 3.01E-49 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 4.7E-277 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:1.20.1640.10 286 499 1.0E-56 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.0E-73 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PANTHER PTHR32063:SF29 1 1008 0.0 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:3.30.2090.10 703 788 1.5E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82693 40 134 7.06E-25 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:3.30.2090.10 183 268 5.1E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 PANTHER PTHR32063 1 1008 0.0 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82866 290 488 8.76E-45 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82693 139 181 9.16E-18 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82693 268 324 9.16E-18 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:3.30.70.1430 40 140 3.5E-29 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82714 183 266 3.14E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82693 554 657 2.88E-17 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 SUPERFAMILY SSF82714 704 788 2.22E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:1.10.3850.10 796 1008 3.3E-63 T 22-04-2016 VPUCM_RS05270 b873cdd5c6e5674871565e442682f09c 1037 Gene3D G3DSA:3.30.70.1430 556 653 2.7E-15 T 22-04-2016 VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.7E-132 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 Gene3D G3DSA:3.10.180.10 5 146 6.7E-44 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 PANTHER PTHR11959 1 355 8.6E-141 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 Gene3D G3DSA:3.10.180.10 159 354 3.5E-73 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 SUPERFAMILY SSF54593 5 341 7.92E-79 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 274 8.7E-14 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 PANTHER PTHR11959:SF1 1 355 8.6E-141 T 22-04-2016 VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 PIRSF PIRSF009283 1 355 2.8E-126 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VPUCM_RS09315 64bb29f762d204656f5ceb18e9f0a81d 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 1.7E-56 T 22-04-2016 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.1490.20 688 744 2.1E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 2.0E-37 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.373 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52335 937 1071 3.53E-34 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.102 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52440 556 675 1.87E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF56059 673 932 4.95E-103 T 22-04-2016 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:1.10.1030.10 400 538 1.8E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PANTHER PTHR11405 1 1069 0.0 T 22-04-2016 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PANTHER PTHR11405:SF5 1 1069 0.0 T 22-04-2016 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 22-04-2016 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02142 MGS-like domain 956 1041 8.3E-16 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.1380 939 1071 1.8E-38 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF48108 397 554 6.8E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 5.7E-41 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 SMART SM01096 424 547 4.7E-76 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.20 3 108 3.0E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.20 539 662 9.0E-61 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 SMART SM00851 955 1041 1.3E-25 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52440 1 127 3.74E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.470.20 745 932 1.6E-81 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.470.20 200 399 1.5E-74 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS02315 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.1490.20 141 199 2.5E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 SUPERFAMILY SSF52255 2 158 1.07E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 PANTHER PTHR23046 2 161 2.5E-84 T 22-04-2016 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 PANTHER PTHR23046:SF2 2 161 2.5E-84 T 22-04-2016 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 PIRSF PIRSF001338 1 160 1.2E-68 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 4.6E-67 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 Gene3D G3DSA:3.40.50.7700 1 158 2.0E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 Pfam PF00731 AIR carboxylase 2 150 7.3E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 SMART SM01001 1 152 8.6E-104 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VPUCM_RS15850 8cd12974b62ce677a69cb68a926a7cca 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.52 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Gene3D G3DSA:2.40.240.10 348 462 6.9E-52 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 4.3E-65 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 SUPERFAMILY SSF52374 11 337 4.5E-104 T 22-04-2016 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.569 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 PANTHER PTHR11451 7 247 2.4E-243 T 22-04-2016 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 PANTHER PTHR11451 267 552 2.4E-243 T 22-04-2016 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Gene3D G3DSA:3.40.50.620 28 96 9.7E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Gene3D G3DSA:3.40.50.620 212 262 9.7E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Gene3D G3DSA:1.10.1160.10 263 338 6.0E-39 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Gene3D G3DSA:3.90.800.10 101 209 3.3E-48 T 22-04-2016 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.3E-299 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 PANTHER PTHR11451:SF29 7 247 2.4E-243 T 22-04-2016 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 PANTHER PTHR11451:SF29 267 552 2.4E-243 T 22-04-2016 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Gene3D G3DSA:2.40.240.10 463 548 5.0E-35 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 SUPERFAMILY SSF50715 340 548 1.99E-81 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VPUCM_RS11870 e59cd4b68e0c2a8ab40d277830119804 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.0E-127 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS06495 35cfe98f45734f39ba12aa70072751d1 207 Gene3D G3DSA:1.25.40.10 73 117 2.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS06495 35cfe98f45734f39ba12aa70072751d1 207 Gene3D G3DSA:1.25.40.10 118 206 6.5E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS06495 35cfe98f45734f39ba12aa70072751d1 207 SUPERFAMILY SSF48452 74 180 1.46E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05170 3b45074c90f8f92813c05f05f9cca852 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 2.0E-40 T 22-04-2016 VPUCM_RS05170 3b45074c90f8f92813c05f05f9cca852 194 SMART SM00471 26 151 8.0E-8 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS05170 3b45074c90f8f92813c05f05f9cca852 194 PANTHER PTHR11845 4 190 5.1E-33 T 22-04-2016 VPUCM_RS05170 3b45074c90f8f92813c05f05f9cca852 194 SUPERFAMILY SSF109604 4 184 6.85E-44 T 22-04-2016 VPUCM_RS05170 3b45074c90f8f92813c05f05f9cca852 194 Pfam PF13023 HD domain 11 159 2.9E-16 T 22-04-2016 IPR006674 HD domain VPUCM_RS05170 3b45074c90f8f92813c05f05f9cca852 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 46.038 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VPUCM_RS05170 3b45074c90f8f92813c05f05f9cca852 194 Gene3D G3DSA:1.10.3210.10 2 193 3.4E-48 T 22-04-2016 IPR006674 HD domain VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 PIRSF PIRSF005572 2 384 3.1E-138 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.686 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-89 T 22-04-2016 IPR000192 Aminotransferase class V domain VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 PANTHER PTHR11601:SF45 4 404 7.7E-238 T 22-04-2016 VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 SUPERFAMILY SSF53383 5 391 3.86E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.6E-230 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 PANTHER PTHR11601 4 404 7.7E-238 T 22-04-2016 VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 Gene3D G3DSA:3.40.640.10 17 254 5.5E-100 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VPUCM_RS02945 0001af578537a285348cee7fd91ec29c 404 Gene3D G3DSA:3.90.1150.10 255 374 1.7E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS02645 42bbb553a7f72323ecbe1513192beb2e 494 PANTHER PTHR30252:SF0 1 470 2.7E-170 T 22-04-2016 VPUCM_RS02645 42bbb553a7f72323ecbe1513192beb2e 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.9E-21 T 22-04-2016 IPR025299 CstA, C-terminal domain VPUCM_RS02645 42bbb553a7f72323ecbe1513192beb2e 494 PANTHER PTHR30252 1 470 2.7E-170 T 22-04-2016 VPUCM_RS02645 42bbb553a7f72323ecbe1513192beb2e 494 Pfam PF02554 Carbon starvation protein CstA 4 144 5.3E-33 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VPUCM_RS08665 f51fd69a9957117a3442e8b07f8203e3 125 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 125 9.9E-57 T 22-04-2016 IPR012672 Type III secretion system YscX VPUCM_RS08665 f51fd69a9957117a3442e8b07f8203e3 125 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 125 1.6E-51 T 22-04-2016 IPR012672 Type III secretion system YscX VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 SUPERFAMILY SSF52467 6 234 1.58E-72 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 PANTHER PTHR11085:SF17 6 234 3.6E-79 T 22-04-2016 VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 Pfam PF02146 Sir2 family 13 186 4.3E-50 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 57.503 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 PANTHER PTHR11085 6 234 3.6E-79 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 Gene3D G3DSA:3.30.1600.10 22 61 2.6E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 Gene3D G3DSA:3.30.1600.10 114 158 2.6E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 Gene3D G3DSA:3.40.50.1220 165 231 7.3E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 Gene3D G3DSA:3.40.50.1220 71 113 7.3E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS08085 82f3cd71c2f0dd644357ceef0a141285 241 Gene3D G3DSA:3.40.50.1220 6 21 7.3E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS05770 35b767f80a8db273937db168f5eace26 388 PANTHER PTHR30094:SF5 9 388 4.2E-127 T 22-04-2016 VPUCM_RS05770 35b767f80a8db273937db168f5eace26 388 PANTHER PTHR30094 9 388 4.2E-127 T 22-04-2016 VPUCM_RS05770 35b767f80a8db273937db168f5eace26 388 SUPERFAMILY SSF52440 174 280 2.24E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS05770 35b767f80a8db273937db168f5eace26 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.6E-157 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain VPUCM_RS05770 35b767f80a8db273937db168f5eace26 388 SUPERFAMILY SSF56059 267 385 1.01E-83 T 22-04-2016 VPUCM_RS05770 35b767f80a8db273937db168f5eace26 388 SUPERFAMILY SSF56059 1 169 1.01E-83 T 22-04-2016 VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 SUPERFAMILY SSF54631 209 342 9.39E-23 T 22-04-2016 VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 Gene3D G3DSA:3.30.465.10 332 433 1.3E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 Gene3D G3DSA:3.10.580.10 209 331 1.0E-11 T 22-04-2016 VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 SUPERFAMILY SSF56176 354 433 7.63E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 Pfam PF03471 Transporter associated domain 354 434 5.9E-20 T 22-04-2016 IPR005170 Transporter-associated domain VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 PANTHER PTHR22777:SF8 12 447 2.3E-149 T 22-04-2016 VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 SMART SM01091 353 435 4.9E-25 T 22-04-2016 IPR005170 Transporter-associated domain VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 PANTHER PTHR22777 12 447 2.3E-149 T 22-04-2016 VPUCM_RS05050 51b2b6baa63a4bdc273e8fc11aaa50aa 450 Pfam PF01595 Domain of unknown function DUF21 16 206 2.6E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 VPUCM_RS08480 e2cc52820a328c8b61c7ee92dc8e4426 467 Gene3D G3DSA:1.10.287.950 220 434 2.0E-53 T 22-04-2016 VPUCM_RS08480 e2cc52820a328c8b61c7ee92dc8e4426 467 PANTHER PTHR32089 119 467 1.3E-118 T 22-04-2016 VPUCM_RS08480 e2cc52820a328c8b61c7ee92dc8e4426 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 266 462 4.3E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS08480 e2cc52820a328c8b61c7ee92dc8e4426 467 SUPERFAMILY SSF58104 157 466 2.35E-66 T 22-04-2016 VPUCM_RS08480 e2cc52820a328c8b61c7ee92dc8e4426 467 PANTHER PTHR32089:SF65 119 467 1.3E-118 T 22-04-2016 VPUCM_RS08480 e2cc52820a328c8b61c7ee92dc8e4426 467 SMART SM00283 205 466 5.9E-59 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS13565 8b53e6bc0e007b88c5d20e9228ae7209 342 Gene3D G3DSA:3.40.50.150 112 168 8.2E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13565 8b53e6bc0e007b88c5d20e9228ae7209 342 Gene3D G3DSA:3.40.50.150 204 321 8.2E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13565 8b53e6bc0e007b88c5d20e9228ae7209 342 Pfam PF01170 Putative RNA methylase family UPF0020 134 295 5.3E-13 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS13565 8b53e6bc0e007b88c5d20e9228ae7209 342 SUPERFAMILY SSF53335 106 316 2.89E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 SMART SM00116 233 280 5.2E-6 T 22-04-2016 IPR000644 CBS domain VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 SMART SM00116 159 216 5.6E-5 T 22-04-2016 IPR000644 CBS domain VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 Pfam PF00571 CBS domain 226 278 3.4E-9 T 22-04-2016 IPR000644 CBS domain VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 Pfam PF00571 CBS domain 156 214 8.6E-7 T 22-04-2016 IPR000644 CBS domain VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 Gene3D G3DSA:2.60.120.10 10 137 7.6E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.9E-47 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 SMART SM00100 17 134 3.9E-7 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 PANTHER PTHR11911 144 454 1.1E-41 T 22-04-2016 VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 5.0E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 Gene3D G3DSA:3.10.580.10 151 281 3.3E-30 T 22-04-2016 VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 PANTHER PTHR11911:SF110 144 454 1.1E-41 T 22-04-2016 VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 3.9E-46 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 SUPERFAMILY SSF51206 7 135 9.69E-29 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS06640 9339486b4af135e291593348bcd98266 629 SUPERFAMILY SSF54631 151 278 6.22E-27 T 22-04-2016 VPUCM_RS10890 332304d7e820edc1aa36503b58a5eb87 346 PANTHER PTHR22935 75 346 4.9E-43 T 22-04-2016 VPUCM_RS10890 332304d7e820edc1aa36503b58a5eb87 346 Gene3D G3DSA:3.40.710.10 22 342 1.7E-53 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS10890 332304d7e820edc1aa36503b58a5eb87 346 Pfam PF00144 Beta-lactamase 47 324 2.1E-30 T 22-04-2016 IPR001466 Beta-lactamase-related VPUCM_RS10890 332304d7e820edc1aa36503b58a5eb87 346 SUPERFAMILY SSF56601 4 343 5.12E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 Gene3D G3DSA:1.10.3210.10 324 435 4.7E-4 T 22-04-2016 IPR006674 HD domain VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 PANTHER PTHR30005:SF4 6 501 5.3E-207 T 22-04-2016 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 4.7E-101 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 PIRSF PIRSF001267 2 501 2.2E-201 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 8.7E-86 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 Gene3D G3DSA:3.30.420.150 132 307 2.0E-52 T 22-04-2016 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 SUPERFAMILY SSF53067 136 308 2.89E-46 T 22-04-2016 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 SUPERFAMILY SSF109604 312 500 3.39E-47 T 22-04-2016 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 PANTHER PTHR30005 6 501 5.3E-207 T 22-04-2016 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 SUPERFAMILY SSF53067 12 131 1.31E-35 T 22-04-2016 VPUCM_RS02835 02a7d082e98c10baed8fc975ee711d0b 501 Gene3D G3DSA:3.30.420.40 6 131 1.1E-42 T 22-04-2016 VPUCM_RS12985 f57769e97919f1ac713def7bb3d4134d 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VPUCM_RS12985 f57769e97919f1ac713def7bb3d4134d 222 SMART SM00947 30 192 1.3E-66 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VPUCM_RS12985 f57769e97919f1ac713def7bb3d4134d 222 PANTHER PTHR11002:SF11 1 207 5.0E-138 T 22-04-2016 VPUCM_RS12985 f57769e97919f1ac713def7bb3d4134d 222 PANTHER PTHR11002 1 207 5.0E-138 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VPUCM_RS12985 f57769e97919f1ac713def7bb3d4134d 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VPUCM_RS12985 f57769e97919f1ac713def7bb3d4134d 222 Gene3D G3DSA:3.40.1050.10 1 212 1.5E-79 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VPUCM_RS12985 f57769e97919f1ac713def7bb3d4134d 222 SUPERFAMILY SSF53056 2 212 1.83E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VPUCM_RS12985 f57769e97919f1ac713def7bb3d4134d 222 Pfam PF00484 Carbonic anhydrase 38 188 9.3E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 51.235 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 SMART SM01091 493 572 1.6E-9 T 22-04-2016 IPR005170 Transporter-associated domain VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 SUPERFAMILY SSF56176 506 580 8.45E-8 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 Gene3D G3DSA:3.30.70.1450 420 483 2.2E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 PANTHER PTHR32507 1 575 3.3E-286 T 22-04-2016 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 385 1.9E-57 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 Gene3D G3DSA:3.30.465.10 500 569 2.1E-8 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 SUPERFAMILY SSF116726 413 481 6.54E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 Pfam PF02080 TrkA-C domain 417 484 4.1E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 PANTHER PTHR32507:SF7 1 575 3.3E-286 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 VPUCM_RS15005 9a85067953b90c6bac03bf094bfe3a7b 581 Pfam PF03471 Transporter associated domain 497 570 2.2E-7 T 22-04-2016 IPR005170 Transporter-associated domain VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 5.9E-60 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 PANTHER PTHR15184 1 467 0.0 T 22-04-2016 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.4E-20 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF47917 352 466 1.83E-50 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 SMART SM00382 142 334 5.9E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:3.40.50.300 76 350 3.7E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF52540 77 355 5.8E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.1E-248 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 PANTHER PTHR15184:SF44 1 467 0.0 T 22-04-2016 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF50615 1 75 2.17E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.912 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:1.10.1140.10 352 467 1.2E-50 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:2.40.10.170 2 75 7.4E-31 T 22-04-2016 VPUCM_RS16010 76e96d1aad10f6565f3772d07ce24dd0 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:1.10.8.60 318 418 6.9E-38 T 22-04-2016 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM01086 319 414 2.4E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 PANTHER PTHR11262 11 415 5.8E-252 T 22-04-2016 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.324 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:3.40.50.300 296 312 6.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:3.40.50.300 66 255 6.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 7.0E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM00382 113 266 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM00994 13 52 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.1E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 2.2E-209 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 22-04-2016 VPUCM_RS05130 3308a9ef8492d5667d1c583302c6be8d 426 SUPERFAMILY SSF52540 63 404 5.02E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08650 fe222775d0ef57ece7899322f275ec48 137 Pfam PF09621 Type III secretion system regulator (LcrR) 2 137 2.1E-63 T 22-04-2016 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 VPUCM_RS08650 fe222775d0ef57ece7899322f275ec48 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 1 137 6.2E-66 T 22-04-2016 IPR013405 Type III secretion system regulator, LcrR VPUCM_RS06185 d1bb1ed794116010dcac496547b60561 192 Pfam PF00265 Thymidine kinase 2 186 3.2E-59 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VPUCM_RS06185 d1bb1ed794116010dcac496547b60561 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.748 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VPUCM_RS06185 d1bb1ed794116010dcac496547b60561 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VPUCM_RS06185 d1bb1ed794116010dcac496547b60561 192 PANTHER PTHR11441 1 190 2.5E-80 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VPUCM_RS06185 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF52540 2 141 5.57E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06185 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF57716 142 190 1.57E-16 T 22-04-2016 VPUCM_RS06185 d1bb1ed794116010dcac496547b60561 192 PIRSF PIRSF035805 1 192 9.2E-57 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VPUCM_RS06185 d1bb1ed794116010dcac496547b60561 192 Gene3D G3DSA:3.30.60.20 142 189 4.0E-19 T 22-04-2016 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.4E-118 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 5.4E-43 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PANTHER PTHR11405:SF16 1 305 1.1E-144 T 22-04-2016 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 Gene3D G3DSA:3.40.50.1370 147 292 1.1E-56 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PANTHER PTHR11405 1 305 1.1E-144 T 22-04-2016 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.0E-33 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 9.7E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 SUPERFAMILY SSF53671 4 307 1.57E-102 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.935 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 Gene3D G3DSA:3.40.50.1370 8 146 4.8E-51 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.3E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.3E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.3E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13895 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.3E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS05605 d926059c87db92af22a1db4ab582fe68 246 PANTHER PTHR30133:SF3 3 246 1.1E-164 T 22-04-2016 VPUCM_RS05605 d926059c87db92af22a1db4ab582fe68 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 241 4.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05605 d926059c87db92af22a1db4ab582fe68 246 Gene3D G3DSA:1.10.3720.10 110 241 5.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05605 d926059c87db92af22a1db4ab582fe68 246 Gene3D G3DSA:1.10.3720.10 8 78 5.6E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05605 d926059c87db92af22a1db4ab582fe68 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.6E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VPUCM_RS05605 d926059c87db92af22a1db4ab582fe68 246 PANTHER PTHR30133 3 246 1.1E-164 T 22-04-2016 VPUCM_RS05605 d926059c87db92af22a1db4ab582fe68 246 SUPERFAMILY SSF161098 110 233 4.06E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05605 d926059c87db92af22a1db4ab582fe68 246 SUPERFAMILY SSF161098 11 78 4.06E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00925 1df86af73acb41cceb67cce44459cfad 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.947 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VPUCM_RS00925 1df86af73acb41cceb67cce44459cfad 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 3.1E-72 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS00925 1df86af73acb41cceb67cce44459cfad 316 PIRSF PIRSF026649 6 312 6.4E-79 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS00925 1df86af73acb41cceb67cce44459cfad 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 310 2.2E-134 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VPUCM_RS00925 1df86af73acb41cceb67cce44459cfad 316 PANTHER PTHR30606 6 310 5.8E-141 T 22-04-2016 VPUCM_RS00925 1df86af73acb41cceb67cce44459cfad 316 PANTHER PTHR30606:SF5 6 310 5.8E-141 T 22-04-2016 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 6.1E-77 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.749 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.4E-107 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 PANTHER PTHR10055 2 338 2.4E-178 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 SUPERFAMILY SSF52374 5 334 1.84E-90 T 22-04-2016 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 Gene3D G3DSA:3.40.50.620 4 208 4.2E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 PANTHER PTHR10055:SF10 2 338 2.4E-178 T 22-04-2016 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 Gene3D G3DSA:1.10.240.10 209 327 3.9E-18 T 22-04-2016 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS14630 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 SUPERFAMILY SSF46589 885 949 9.94E-18 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.1E-222 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 5.7E-18 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Gene3D G3DSA:3.90.740.10 194 360 2.9E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PANTHER PTHR11946:SF5 881 945 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PANTHER PTHR11946:SF5 608 861 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PANTHER PTHR11946:SF5 1 314 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PANTHER PTHR11946:SF5 333 570 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 SUPERFAMILY SSF47323 642 899 5.98E-66 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Gene3D G3DSA:3.40.50.620 609 630 2.5E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Gene3D G3DSA:3.40.50.620 3 193 2.5E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Gene3D G3DSA:3.40.50.620 364 571 2.5E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 5.0E-39 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Gene3D G3DSA:1.10.730.10 631 816 2.6E-59 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 SUPERFAMILY SSF50677 191 365 4.84E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.039 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PANTHER PTHR11946 881 945 0.0 T 22-04-2016 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PANTHER PTHR11946 608 861 0.0 T 22-04-2016 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PANTHER PTHR11946 1 314 0.0 T 22-04-2016 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PANTHER PTHR11946 333 570 0.0 T 22-04-2016 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 Gene3D G3DSA:1.10.287.380 879 942 1.3E-5 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 SUPERFAMILY SSF52374 364 571 2.38E-135 T 22-04-2016 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 SUPERFAMILY SSF52374 1 192 2.38E-135 T 22-04-2016 VPUCM_RS13815 64af3cbcd6cf04e02b99d229b8d54485 952 SUPERFAMILY SSF52374 609 641 2.38E-135 T 22-04-2016 VPUCM_RS20790 ec6da1f7bced652c837c98458a2535c9 113 SUPERFAMILY SSF52540 2 30 8.86E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS20790 ec6da1f7bced652c837c98458a2535c9 113 SUPERFAMILY SSF52540 61 87 8.86E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS20790 ec6da1f7bced652c837c98458a2535c9 113 Pfam PF13307 Helicase C-terminal domain 4 104 3.0E-28 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VPUCM_RS20790 ec6da1f7bced652c837c98458a2535c9 113 PANTHER PTHR11472:SF37 1 109 1.5E-53 T 22-04-2016 VPUCM_RS20790 ec6da1f7bced652c837c98458a2535c9 113 SMART SM00491 1 91 8.7E-20 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VPUCM_RS20790 ec6da1f7bced652c837c98458a2535c9 113 Gene3D G3DSA:3.40.50.300 2 87 4.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS20790 ec6da1f7bced652c837c98458a2535c9 113 PANTHER PTHR11472 1 109 1.5E-53 T 22-04-2016 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.2E-13 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 PANTHER PTHR13734 1 294 3.0E-78 T 22-04-2016 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 SUPERFAMILY SSF81301 2 119 1.42E-30 T 22-04-2016 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 Gene3D G3DSA:3.30.460.10 2 121 2.4E-31 T 22-04-2016 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.247 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 PIRSF PIRSF000813 1 406 9.1E-206 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 Pfam PF01966 HD domain 229 314 2.1E-8 T 22-04-2016 IPR006674 HD domain VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.08 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 Pfam PF01743 Poly A polymerase head domain 3 122 1.9E-19 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 Gene3D G3DSA:1.10.3090.10 122 359 3.3E-55 T 22-04-2016 VPUCM_RS02050 1ba68085299053f985a15894fd62f2b2 406 SUPERFAMILY SSF81891 120 400 1.31E-54 T 22-04-2016 VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 Pfam PF01752 Collagenase 317 600 2.6E-108 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 SUPERFAMILY SSF49299 609 691 4.97E-21 T 22-04-2016 IPR000601 PKD domain VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 PANTHER PTHR13062 64 606 3.3E-13 T 22-04-2016 VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 SMART SM00089 611 693 1.4E-23 T 22-04-2016 IPR022409 PKD/Chitinase domain VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 Pfam PF08453 Peptidase family M9 N-terminal 78 258 3.1E-55 T 22-04-2016 IPR013661 Peptidase M9, collagenase, N-terminal domain VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 476 494 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 449 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 415 429 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 498 513 1.6E-35 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 Gene3D G3DSA:2.60.40.670 609 692 8.6E-21 T 22-04-2016 IPR000601 PKD domain VPUCM_RS09360 f56a426fbf8c96afe7a71318a43189d0 814 Pfam PF00801 PKD domain 622 682 4.3E-12 T 22-04-2016 IPR000601 PKD domain VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 Pfam PF01734 Patatin-like phospholipase 45 235 3.4E-28 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 Gene3D G3DSA:3.40.1090.10 38 237 2.4E-13 T 22-04-2016 VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 Pfam PF07244 Surface antigen variable number repeat 355 425 5.3E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 PANTHER PTHR14226 146 467 4.1E-96 T 22-04-2016 VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 PANTHER PTHR14226 30 130 4.1E-96 T 22-04-2016 VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 PANTHER PTHR14226:SF37 146 467 4.1E-96 T 22-04-2016 VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 PANTHER PTHR14226:SF37 30 130 4.1E-96 T 22-04-2016 VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 SUPERFAMILY SSF52151 141 324 6.54E-57 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VPUCM_RS12915 fc1286ee0115ccda958d7c1e1c1f28e8 771 SUPERFAMILY SSF52151 39 111 6.54E-57 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 SUPERFAMILY SSF52540 26 224 1.18E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 Pfam PF16330 MukB hinge domain 647 811 3.1E-73 T 22-04-2016 IPR032520 MukB, hinge domain VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.1E-14 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.923 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PIRSF PIRSF005246 1 1487 0.0 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 Pfam PF04310 MukB N-terminal 2 227 1.4E-121 T 22-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937 99 529 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937 1427 1460 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937 898 939 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937 978 1117 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937 554 580 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937 605 815 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937 1213 1249 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937 848 879 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937:SF201 99 529 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937:SF201 1427 1460 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937:SF201 898 939 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937:SF201 978 1117 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937:SF201 554 580 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937:SF201 605 815 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937:SF201 1213 1249 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 PANTHER PTHR18937:SF201 848 879 0.0 T 22-04-2016 VPUCM_RS10785 4911c5bf3711449110572ea25129d4ac 1487 Gene3D G3DSA:3.40.1140.10 1 225 3.0E-44 T 22-04-2016 VPUCM_RS12145 ee34f11cdd92e348a294d92b9d3ca5dc 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 7.5E-28 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VPUCM_RS12145 ee34f11cdd92e348a294d92b9d3ca5dc 131 PIRSF PIRSF002889 1 131 6.2E-32 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VPUCM_RS12145 ee34f11cdd92e348a294d92b9d3ca5dc 131 PANTHER PTHR30435 2 131 2.7E-43 T 22-04-2016 VPUCM_RS12145 ee34f11cdd92e348a294d92b9d3ca5dc 131 PANTHER PTHR30435:SF12 2 131 2.7E-43 T 22-04-2016 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 PIRSF PIRSF001365 1 292 2.5E-97 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 SMART SM01130 1 290 9.8E-143 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 PANTHER PTHR12128:SF34 1 292 1.1E-142 T 22-04-2016 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.3E-109 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 PANTHER PTHR12128 1 292 1.1E-142 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 1.7E-118 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.888 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 SUPERFAMILY SSF51569 2 290 2.2E-101 T 22-04-2016 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 Gene3D G3DSA:3.20.20.70 1 291 1.0E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 8.4E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 8.4E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 8.4E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 8.4E-36 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS11710 97559051e3866278fd24b26d7fab9afc 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 1.4E-19 T 22-04-2016 VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 PANTHER PTHR30002:SF4 1 367 1.5E-192 T 22-04-2016 VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 1.4E-23 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 Gene3D G3DSA:3.30.70.20 187 261 1.6E-8 T 22-04-2016 VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 PANTHER PTHR30002 1 367 1.5E-192 T 22-04-2016 VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 1.8E-153 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 SUPERFAMILY SSF54862 165 315 1.67E-19 T 22-04-2016 VPUCM_RS14715 c1aeab424169dbb0484a4472c18f64c3 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.999 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS00905 c6a51a0383d0c4606b50d389052007bf 404 SUPERFAMILY SSF56349 98 391 5.0E-52 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS00905 c6a51a0383d0c4606b50d389052007bf 404 PANTHER PTHR30629 1 403 7.9E-69 T 22-04-2016 VPUCM_RS00905 c6a51a0383d0c4606b50d389052007bf 404 Gene3D G3DSA:1.10.443.10 201 387 4.8E-27 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS00905 c6a51a0383d0c4606b50d389052007bf 404 Gene3D G3DSA:1.10.150.130 99 186 2.2E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VPUCM_RS00905 c6a51a0383d0c4606b50d389052007bf 404 Pfam PF00589 Phage integrase family 221 382 3.6E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS00905 c6a51a0383d0c4606b50d389052007bf 404 Pfam PF13356 Domain of unknown function (DUF4102) 6 88 3.6E-12 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:2.40.270.10 1060 1241 2.8E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:2.40.270.10 793 820 2.8E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.286 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856 1181 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856 1034 1128 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856 340 725 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856 743 930 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.1E-28 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:3.90.1110.10 346 444 2.6E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:3.90.1110.10 153 230 2.6E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 7.9E-17 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 1.8E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:2.40.50.100 715 792 3.0E-30 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856:SF20 1181 1342 0.0 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:2.40.50.150 1045 1059 1.6E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:2.40.50.150 828 937 1.6E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.0E-57 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:2.30.150.10 592 656 4.5E-27 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:3.90.1100.10 445 591 2.1E-145 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:3.90.1100.10 659 713 2.1E-145 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Gene3D G3DSA:3.90.1100.10 20 151 2.1E-145 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.0E-156 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.0E-22 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 SUPERFAMILY SSF64484 343 939 0.0 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 SUPERFAMILY SSF64484 11 226 0.0 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 22-04-2016 VPUCM_RS15220 c9c7a172860cee57264279272eb48007 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 2.9E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 PANTHER PTHR33910 2 126 5.3E-30 T 22-04-2016 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.517 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.93E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.93E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.93E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.93E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 Gene3D G3DSA:1.20.5.1030 65 121 1.3E-24 T 22-04-2016 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 4.6E-21 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 9.6E-18 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VPUCM_RS15250 96118cd06073aeecf8d5ce715d47f0b7 126 PANTHER PTHR33910:SF1 2 126 5.3E-30 T 22-04-2016 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 Pfam PF04397 LytTr DNA-binding domain 146 238 2.2E-21 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 SUPERFAMILY SSF52172 1 123 3.56E-28 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:3.40.50.2300 1 117 1.7E-28 T 22-04-2016 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 Pfam PF00072 Response regulator receiver domain 5 112 9.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 SMART SM00850 145 239 3.3E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 SMART SM00448 2 112 7.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 PANTHER PTHR26402 2 115 5.4E-35 T 22-04-2016 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 PANTHER PTHR26402:SF524 2 115 5.4E-35 T 22-04-2016 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:2.20.25.10 217 240 4.5E-5 T 22-04-2016 VPUCM_RS02635 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:2.40.50.40 137 201 4.5E-8 T 22-04-2016 VPUCM_RS05510 616c1eba95862d2ab868bcae168c78f2 414 PANTHER PTHR30489:SF0 1 414 1.2E-80 T 22-04-2016 VPUCM_RS05510 616c1eba95862d2ab868bcae168c78f2 414 PANTHER PTHR30489 1 414 1.2E-80 T 22-04-2016 VPUCM_RS05510 616c1eba95862d2ab868bcae168c78f2 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 3.5E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VPUCM_RS05510 616c1eba95862d2ab868bcae168c78f2 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 3.0E-157 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VPUCM_RS05510 616c1eba95862d2ab868bcae168c78f2 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 5.0E-215 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 VPUCM_RS05510 616c1eba95862d2ab868bcae168c78f2 414 Pfam PF02687 FtsX-like permease family 274 407 8.5E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 Gene3D G3DSA:3.30.70.20 41 100 5.8E-36 T 22-04-2016 VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 Gene3D G3DSA:3.30.70.20 171 225 5.8E-36 T 22-04-2016 VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 PANTHER PTHR11938 5 199 7.6E-90 T 22-04-2016 VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 Gene3D G3DSA:3.30.70.20 134 170 2.2E-14 T 22-04-2016 VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 1.8E-26 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 SUPERFAMILY SSF54862 39 221 1.88E-64 T 22-04-2016 VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 Gene3D G3DSA:3.30.70.20 101 133 6.1E-13 T 22-04-2016 VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 PANTHER PTHR11938:SF110 5 199 7.6E-90 T 22-04-2016 VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 2.4E-132 T 22-04-2016 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VPUCM_RS06515 e19273358c33c2af62b29b32d6086802 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 690 5.3E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 8.2E-24 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 219 4.6E-41 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 SUPERFAMILY SSF48179 610 703 9.35E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 SUPERFAMILY SSF52096 2 303 4.47E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 SUPERFAMILY SSF48179 494 593 1.02E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Gene3D G3DSA:1.10.1040.10 621 702 7.7E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 PANTHER PTHR23309:SF6 7 703 0.0 T 22-04-2016 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 53.055 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 SUPERFAMILY SSF51735 310 491 2.03E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 PANTHER PTHR23309 7 703 0.0 T 22-04-2016 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Gene3D G3DSA:1.10.1040.10 496 588 1.7E-25 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Gene3D G3DSA:3.40.50.720 307 495 9.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 1.7E-53 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Gene3D G3DSA:3.90.226.10 232 269 4.4E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11395 c7b1669950fdccf682f6c1d6ddb4e26a 703 Gene3D G3DSA:3.90.226.10 2 194 4.4E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS10195 4f51683fa835d7f31c286c0899de3362 301 SMART SM01131 178 300 2.2E-33 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VPUCM_RS10195 4f51683fa835d7f31c286c0899de3362 301 SUPERFAMILY SSF64182 1 298 4.97E-67 T 22-04-2016 VPUCM_RS10195 4f51683fa835d7f31c286c0899de3362 301 Gene3D G3DSA:3.90.1640.10 2 180 1.6E-55 T 22-04-2016 VPUCM_RS10195 4f51683fa835d7f31c286c0899de3362 301 Pfam PF02833 DHHA2 domain 180 297 5.8E-17 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VPUCM_RS10195 4f51683fa835d7f31c286c0899de3362 301 Pfam PF01368 DHH family 2 142 1.9E-21 T 22-04-2016 IPR001667 DDH domain VPUCM_RS10195 4f51683fa835d7f31c286c0899de3362 301 PANTHER PTHR12112 1 301 3.7E-99 T 22-04-2016 VPUCM_RS10195 4f51683fa835d7f31c286c0899de3362 301 PANTHER PTHR12112:SF17 1 301 3.7E-99 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 Pfam PF00344 SecY translocase 76 418 3.2E-117 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 Gene3D G3DSA:1.10.3370.10 15 438 1.2E-162 T 22-04-2016 IPR023201 SecY subunit domain VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 1.1E-133 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.049 T 22-04-2016 IPR026593 Protein translocase subunit SecY VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PANTHER PTHR10906:SF2 17 444 8.3E-228 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 22-04-2016 IPR030659 SecY conserved site VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PANTHER PTHR10906 17 444 8.3E-228 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 22-04-2016 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 PIRSF PIRSF004557 10 442 1.4E-121 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VPUCM_RS01530 4eebfc4701b8144df1e94eda3f507e12 444 SUPERFAMILY SSF103491 15 425 1.44E-130 T 22-04-2016 IPR023201 SecY subunit domain VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 PANTHER PTHR24423 1 6 6.1E-49 T 22-04-2016 VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 PANTHER PTHR24423 185 437 6.1E-49 T 22-04-2016 VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 SMART SM00387 342 448 2.2E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 445 8.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 SUPERFAMILY SSF55874 308 444 4.19E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 Gene3D G3DSA:1.10.287.130 236 285 6.5E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 3.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 SUPERFAMILY SSF47384 224 289 1.14E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 PANTHER PTHR24423:SF496 1 6 6.1E-49 T 22-04-2016 VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 PANTHER PTHR24423:SF496 185 437 6.1E-49 T 22-04-2016 VPUCM_RS09965 b8960413eafa874e1d2b7df930061dd9 449 Gene3D G3DSA:3.30.565.10 308 444 1.6E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00030 65ba0ee293b749196a752f611c545185 245 PANTHER PTHR24220 3 242 2.0E-129 T 22-04-2016 VPUCM_RS00030 65ba0ee293b749196a752f611c545185 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS00030 65ba0ee293b749196a752f611c545185 245 SMART SM00382 26 216 9.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00030 65ba0ee293b749196a752f611c545185 245 SUPERFAMILY SSF52540 1 238 1.46E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00030 65ba0ee293b749196a752f611c545185 245 Gene3D G3DSA:3.40.50.300 1 240 5.0E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00030 65ba0ee293b749196a752f611c545185 245 PANTHER PTHR24220:SF327 3 242 2.0E-129 T 22-04-2016 VPUCM_RS00030 65ba0ee293b749196a752f611c545185 245 PIRSF PIRSF039085 1 244 2.2E-106 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VPUCM_RS00030 65ba0ee293b749196a752f611c545185 245 Pfam PF00005 ABC transporter 17 168 3.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS05570 151427944effd2c345b9a706a87e26bf 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 8.2E-21 T 22-04-2016 VPUCM_RS05570 151427944effd2c345b9a706a87e26bf 246 SUPERFAMILY SSF102114 23 220 4.32E-30 T 22-04-2016 VPUCM_RS05570 151427944effd2c345b9a706a87e26bf 246 PANTHER PTHR30352 1 246 4.9E-142 T 22-04-2016 VPUCM_RS05570 151427944effd2c345b9a706a87e26bf 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VPUCM_RS05570 151427944effd2c345b9a706a87e26bf 246 Gene3D G3DSA:3.80.30.10 69 245 3.4E-72 T 22-04-2016 VPUCM_RS05570 151427944effd2c345b9a706a87e26bf 246 PANTHER PTHR30352:SF9 1 246 4.9E-142 T 22-04-2016 VPUCM_RS05570 151427944effd2c345b9a706a87e26bf 246 Pfam PF04055 Radical SAM superfamily 24 178 5.4E-33 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS05570 151427944effd2c345b9a706a87e26bf 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.3E-108 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.0E-21 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 8.1E-16 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 7.5E-87 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 PANTHER PTHR21089:SF2 1 275 1.5E-149 T 22-04-2016 VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 Gene3D G3DSA:3.40.50.720 112 248 1.0E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 SUPERFAMILY SSF53223 6 105 1.38E-30 T 22-04-2016 VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 SUPERFAMILY SSF51735 106 273 3.04E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.404 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 Gene3D G3DSA:3.40.192.10 3 111 2.0E-35 T 22-04-2016 VPUCM_RS15835 ecf90a0b6dd70fb4383426cb9130dbc1 277 PANTHER PTHR21089 1 275 1.5E-149 T 22-04-2016 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.30.1490.20 137 191 3.0E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 SUPERFAMILY SSF52440 2 122 1.09E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 9.5E-141 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 SUPERFAMILY SSF56059 123 313 5.82E-59 T 22-04-2016 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 6.9E-49 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 PANTHER PTHR21621:SF4 1 314 2.4E-162 T 22-04-2016 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.30.470.20 192 299 1.2E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.40.50.20 2 129 3.6E-57 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 PANTHER PTHR21621 1 314 2.4E-162 T 22-04-2016 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VPUCM_RS13500 e55072d4baa3d78c203d6c267b568f6e 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.175 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VPUCM_RS13990 9952813b74afba76923b03c70b084c52 287 Gene3D G3DSA:3.40.50.300 1 155 2.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13990 9952813b74afba76923b03c70b084c52 287 SUPERFAMILY SSF52540 2 151 1.74E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13990 9952813b74afba76923b03c70b084c52 287 Pfam PF03668 P-loop ATPase protein family 1 284 4.0E-110 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 VPUCM_RS13990 9952813b74afba76923b03c70b084c52 287 PIRSF PIRSF005052 1 286 3.0E-105 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 VPUCM_RS13990 9952813b74afba76923b03c70b084c52 287 PANTHER PTHR30448:SF0 1 284 3.8E-133 T 22-04-2016 VPUCM_RS13990 9952813b74afba76923b03c70b084c52 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.782 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 VPUCM_RS13990 9952813b74afba76923b03c70b084c52 287 PANTHER PTHR30448 1 284 3.8E-133 T 22-04-2016 VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 SUPERFAMILY SSF55326 3 137 6.67E-33 T 22-04-2016 VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 SUPERFAMILY SSF56042 141 307 8.82E-34 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 PIRSF PIRSF005303 1 320 2.9E-81 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 1.9E-20 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 317 28.638 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 PANTHER PTHR30270:SF0 1 321 2.7E-126 T 22-04-2016 VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 301 1.6E-9 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 Gene3D G3DSA:3.30.1330.10 3 140 4.3E-41 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 PANTHER PTHR30270 1 321 2.7E-126 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 Gene3D G3DSA:3.90.650.10 144 320 4.9E-46 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS12685 68033f22775d0df70940aa6430e32a25 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 1.5E-101 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 Pfam PF03466 LysR substrate binding domain 99 299 3.7E-23 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 PANTHER PTHR30118:SF8 2 308 8.1E-77 T 22-04-2016 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 SUPERFAMILY SSF53850 92 298 1.59E-41 T 22-04-2016 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 PANTHER PTHR30118 2 308 8.1E-77 T 22-04-2016 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 Gene3D G3DSA:3.40.190.10 175 269 5.5E-21 T 22-04-2016 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 SUPERFAMILY SSF46785 7 88 2.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 Gene3D G3DSA:3.40.190.10 274 302 2.6E-25 T 22-04-2016 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 Gene3D G3DSA:3.40.190.10 92 174 2.6E-25 T 22-04-2016 VPUCM_RS00120 7e042313c49c971d08662bc095a33a0d 313 Gene3D G3DSA:1.10.10.10 5 90 1.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 PANTHER PTHR30146:SF46 1 327 1.9E-203 T 22-04-2016 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 PANTHER PTHR30146 1 327 1.9E-203 T 22-04-2016 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 SMART SM00354 1 71 5.7E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 SUPERFAMILY SSF53822 61 325 1.31E-66 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:3.40.50.2300 58 166 1.6E-42 T 22-04-2016 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.9E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 Pfam PF13377 Periplasmic binding protein-like domain 168 325 1.0E-29 T 22-04-2016 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:3.40.50.2300 167 325 1.7E-48 T 22-04-2016 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:1.10.260.40 3 57 2.6E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS13705 ec84b4266ce8788026a2dca6652ca235 336 SUPERFAMILY SSF47413 2 59 1.13E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 2.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 Pfam PF00989 PAS fold 214 277 1.3E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 SMART SM00091 213 279 9.3E-5 T 22-04-2016 IPR000014 PAS domain VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 SUPERFAMILY SSF55874 389 534 1.17E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 SUPERFAMILY SSF55890 322 390 1.14E-9 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 Gene3D G3DSA:3.30.450.20 33 171 6.3E-47 T 22-04-2016 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 PANTHER PTHR24423:SF375 47 158 1.1E-99 T 22-04-2016 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 PANTHER PTHR24423:SF375 191 538 1.1E-99 T 22-04-2016 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 319 373 7.3E-10 T 22-04-2016 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 SUPERFAMILY SSF103190 40 169 2.24E-34 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 Gene3D G3DSA:3.30.450.20 219 309 2.1E-9 T 22-04-2016 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 SUPERFAMILY SSF55785 215 306 8.2E-11 T 22-04-2016 IPR000014 PAS domain VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 PANTHER PTHR24423 47 158 1.1E-99 T 22-04-2016 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 PANTHER PTHR24423 191 538 1.1E-99 T 22-04-2016 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 Gene3D G3DSA:1.10.287.130 310 377 3.2E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 Gene3D G3DSA:3.30.565.10 389 534 8.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 Pfam PF17203 Single cache domain 3 39 168 1.7E-18 T 22-04-2016 IPR033463 Single cache domain 3 VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 SMART SM00387 418 537 6.0E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS08895 ab73d433c4515844f32e30d1f9d9c7ba 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 536 2.4E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 SUPERFAMILY SSF52540 5 243 3.9E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 Gene3D G3DSA:3.40.50.300 4 236 7.1E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 SMART SM00382 29 214 4.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 PANTHER PTHR24220 6 335 1.2E-129 T 22-04-2016 VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 Pfam PF08402 TOBE domain 276 341 2.4E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 SUPERFAMILY SSF50331 265 342 2.44E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 Pfam PF00005 ABC transporter 20 164 9.2E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS12880 9fee982a5165a712c36eef1a2f1dd513 343 PANTHER PTHR24220:SF282 6 335 1.2E-129 T 22-04-2016 VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 PIRSF PIRSF000183 1 371 1.4E-157 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 SMART SM01003 4 137 2.6E-79 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.0E-155 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 SUPERFAMILY SSF52283 305 360 3.49E-67 T 22-04-2016 VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 SUPERFAMILY SSF52283 1 137 3.49E-67 T 22-04-2016 VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.3E-46 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 SMART SM01002 149 297 7.4E-88 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 SUPERFAMILY SSF51735 137 303 1.74E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 Gene3D G3DSA:3.40.50.1770 204 357 2.9E-30 T 22-04-2016 VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 PANTHER PTHR10160 1 371 1.9E-213 T 22-04-2016 VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 Gene3D G3DSA:3.50.50.60 179 203 5.2E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 3.1E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VPUCM_RS05960 32647fcbacf47c328b6ae89c6f659637 374 Gene3D G3DSA:3.40.50.1770 3 178 1.7E-62 T 22-04-2016 VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 PIRSF PIRSF002457 1 472 2.3E-122 T 22-04-2016 IPR030676 Citrate carrier CitT-related VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 2.0E-79 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 PANTHER PTHR10283:SF92 1 6 5.5E-136 T 22-04-2016 VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 PANTHER PTHR10283:SF92 31 69 5.5E-136 T 22-04-2016 VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 PANTHER PTHR10283:SF92 89 468 5.5E-136 T 22-04-2016 VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 PANTHER PTHR10283 1 6 5.5E-136 T 22-04-2016 VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 PANTHER PTHR10283 31 69 5.5E-136 T 22-04-2016 VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 PANTHER PTHR10283 89 468 5.5E-136 T 22-04-2016 VPUCM_RS07675 3068008131aa89591ad336dc3ee7fe29 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 4.2E-51 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.128 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF81799 113 216 3.53E-31 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:3.40.50.150 7 110 3.2E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:3.40.50.150 220 316 3.2E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF53335 7 113 6.94E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF53335 217 316 6.94E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 PANTHER PTHR11265 1 316 8.7E-145 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 PIRSF PIRSF004486 1 316 1.4E-101 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 Pfam PF01795 MraW methylase family 5 315 4.5E-110 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:1.10.150.170 112 219 1.1E-34 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 PANTHER PTHR11265:SF0 1 316 8.7E-145 T 22-04-2016 VPUCM_RS02220 27127fcdd94d49d4920e644610f7118e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 4.3E-119 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Gene3D G3DSA:2.70.98.10 715 1000 1.4E-89 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 SUPERFAMILY SSF74650 715 1001 3.24E-87 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PANTHER PTHR10066:SF72 2 552 0.0 T 22-04-2016 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PANTHER PTHR10066:SF72 570 1003 0.0 T 22-04-2016 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 SMART SM01038 728 999 2.3E-126 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 4.6E-32 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Pfam PF16353 Domain of unknown function(DUF4981) 616 700 1.6E-13 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 SUPERFAMILY SSF49785 2 206 3.68E-61 T 22-04-2016 IPR008979 Galactose-binding domain-like VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 7.7E-115 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 SUPERFAMILY SSF49303 613 706 2.42E-19 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 SUPERFAMILY SSF51445 321 599 4.18E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Gene3D G3DSA:3.20.20.80 321 599 7.2E-93 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Gene3D G3DSA:2.60.40.320 602 701 1.8E-22 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Gene3D G3DSA:2.60.120.260 2 195 3.2E-71 T 22-04-2016 IPR008979 Galactose-binding domain-like VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PANTHER PTHR10066 2 552 0.0 T 22-04-2016 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 PANTHER PTHR10066 570 1003 0.0 T 22-04-2016 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 5.2E-17 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 SUPERFAMILY SSF49303 209 319 8.43E-24 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Gene3D G3DSA:2.60.40.320 196 319 3.6E-32 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Pfam PF02929 Beta galactosidase small chain 730 998 7.0E-70 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS04215 3b6b90b7c180c70f9405eeebcf1daa85 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 204 3.1E-47 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:3.40.50.620 11 227 1.7E-82 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 PANTHER PTHR11766 4 395 8.7E-235 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 SUPERFAMILY SSF55174 297 394 8.98E-16 T 22-04-2016 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 1.3E-79 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.308 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 PANTHER PTHR11766:SF1 4 395 8.7E-235 T 22-04-2016 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 SUPERFAMILY SSF52374 6 316 1.08E-98 T 22-04-2016 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:3.10.290.10 327 393 1.9E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:1.10.240.10 228 326 1.0E-37 T 22-04-2016 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VPUCM_RS12785 8b831f9a2af327bbe3be08119cb9dfe3 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 1.1E-126 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VPUCM_RS10335 a2e453288da42532b436e832210b3d54 703 PANTHER PTHR32234 1 702 2.4E-132 T 22-04-2016 VPUCM_RS10335 a2e453288da42532b436e832210b3d54 703 Gene3D G3DSA:3.40.30.10 582 674 2.6E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS10335 a2e453288da42532b436e832210b3d54 703 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 515 9.6E-15 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VPUCM_RS10335 a2e453288da42532b436e832210b3d54 703 SUPERFAMILY SSF52833 579 673 1.21E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS10335 a2e453288da42532b436e832210b3d54 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VPUCM_RS10335 a2e453288da42532b436e832210b3d54 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 164 3.5E-16 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VPUCM_RS10335 a2e453288da42532b436e832210b3d54 703 PANTHER PTHR32234:SF3 1 702 2.4E-132 T 22-04-2016 VPUCM_RS10335 a2e453288da42532b436e832210b3d54 703 Pfam PF13899 Thioredoxin-like 586 673 2.1E-11 T 22-04-2016 VPUCM_RS01240 952888238085c6aaa1e190947eb32195 297 Pfam PF04321 RmlD substrate binding domain 1 295 1.1E-98 T 22-04-2016 IPR029903 RmlD-like substrate binding domain VPUCM_RS01240 952888238085c6aaa1e190947eb32195 297 PANTHER PTHR10491 1 294 1.6E-87 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family VPUCM_RS01240 952888238085c6aaa1e190947eb32195 297 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 293 8.1E-99 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family VPUCM_RS01240 952888238085c6aaa1e190947eb32195 297 Gene3D G3DSA:3.40.50.720 1 234 3.7E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01240 952888238085c6aaa1e190947eb32195 297 PANTHER PTHR10491:SF4 1 294 1.6E-87 T 22-04-2016 VPUCM_RS01240 952888238085c6aaa1e190947eb32195 297 SUPERFAMILY SSF51735 1 294 3.02E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS03665 54aa4c94ecd92ec47c7b921398170cd0 606 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 153 287 6.4E-10 T 22-04-2016 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain VPUCM_RS03665 54aa4c94ecd92ec47c7b921398170cd0 606 SUPERFAMILY SSF52540 353 592 2.42E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03665 54aa4c94ecd92ec47c7b921398170cd0 606 SUPERFAMILY SSF52540 129 291 2.42E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03665 54aa4c94ecd92ec47c7b921398170cd0 606 Gene3D G3DSA:3.40.50.300 114 227 9.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03665 54aa4c94ecd92ec47c7b921398170cd0 606 Gene3D G3DSA:3.40.50.300 399 600 9.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03665 54aa4c94ecd92ec47c7b921398170cd0 606 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 599 5.0E-226 T 22-04-2016 IPR022458 Conjugative coupling factor TraG/TraD VPUCM_RS03665 54aa4c94ecd92ec47c7b921398170cd0 606 Pfam PF12696 TraM recognition site of TraD and TraG 451 576 2.7E-12 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site VPUCM_RS11165 f74ad38cef8f96d1d4b61d05f6751d65 279 Gene3D G3DSA:3.40.50.150 74 264 1.1E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS11165 f74ad38cef8f96d1d4b61d05f6751d65 279 PANTHER PTHR10108:SF886 16 275 1.5E-42 T 22-04-2016 VPUCM_RS11165 f74ad38cef8f96d1d4b61d05f6751d65 279 SUPERFAMILY SSF53335 4 258 9.34E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS11165 f74ad38cef8f96d1d4b61d05f6751d65 279 PIRSF PIRSF018249 1 274 1.5E-87 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VPUCM_RS11165 f74ad38cef8f96d1d4b61d05f6751d65 279 PANTHER PTHR10108 16 275 1.5E-42 T 22-04-2016 VPUCM_RS11165 f74ad38cef8f96d1d4b61d05f6751d65 279 Pfam PF13847 Methyltransferase domain 87 211 5.1E-16 T 22-04-2016 IPR025714 Methyltransferase domain VPUCM_RS04480 c685fa5e181f6217b2e906a8f7177593 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.4E-204 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VPUCM_RS04480 c685fa5e181f6217b2e906a8f7177593 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 4.1E-108 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VPUCM_RS04480 c685fa5e181f6217b2e906a8f7177593 414 PANTHER PTHR30578 3 414 8.9E-261 T 22-04-2016 VPUCM_RS04480 c685fa5e181f6217b2e906a8f7177593 414 PANTHER PTHR30578:SF1 3 414 8.9E-261 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VPUCM_RS04480 c685fa5e181f6217b2e906a8f7177593 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.536 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VPUCM_RS04480 c685fa5e181f6217b2e906a8f7177593 414 PIRSF PIRSF016055 1 414 1.6E-200 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 SMART SM00739 127 154 3.9E-4 T 22-04-2016 IPR005824 KOW VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.3E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.2E-70 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 SMART SM00738 6 115 1.0E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 Pfam PF00467 KOW motif 131 162 3.7E-7 T 22-04-2016 IPR005824 KOW VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.932 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 PANTHER PTHR30265 3 182 1.1E-84 T 22-04-2016 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:2.30.30.30 120 181 8.9E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VPUCM_RS15245 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:3.30.70.940 6 117 5.5E-44 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VPUCM_RS07510 f28e05d32261b08d113321b6c1323cba 390 Gene3D G3DSA:3.40.50.2000 260 332 5.8E-8 T 22-04-2016 VPUCM_RS07510 f28e05d32261b08d113321b6c1323cba 390 SUPERFAMILY SSF53756 10 359 6.8E-29 T 22-04-2016 VPUCM_RS07510 f28e05d32261b08d113321b6c1323cba 390 Pfam PF00534 Glycosyl transferases group 1 192 336 1.1E-12 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS01760 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 6.5E-40 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VPUCM_RS01760 f8e2fa0ab0d904fabfdeaf7445fc8729 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01760 f8e2fa0ab0d904fabfdeaf7445fc8729 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01760 f8e2fa0ab0d904fabfdeaf7445fc8729 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VPUCM_RS01760 f8e2fa0ab0d904fabfdeaf7445fc8729 103 PANTHER PTHR21349 1 101 6.0E-48 T 22-04-2016 VPUCM_RS01760 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.361 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 PANTHER PTHR10357 456 561 2.5E-273 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 PANTHER PTHR10357 10 424 2.5E-273 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 SMART SM00642 18 419 1.2E-164 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 556 2.5E-9 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 PANTHER PTHR10357:SF170 456 561 2.5E-273 T 22-04-2016 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 PANTHER PTHR10357:SF170 10 424 2.5E-273 T 22-04-2016 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 SUPERFAMILY SSF51445 9 477 2.28E-164 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 Gene3D G3DSA:3.20.20.80 180 479 3.8E-129 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 Gene3D G3DSA:3.20.20.80 8 109 3.8E-129 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 Gene3D G3DSA:2.60.40.1180 482 559 2.2E-20 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 SUPERFAMILY SSF51011 480 559 3.69E-16 T 22-04-2016 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 Pfam PF00128 Alpha amylase, catalytic domain 33 375 3.1E-128 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 Gene3D G3DSA:3.90.400.10 110 179 7.6E-32 T 22-04-2016 VPUCM_RS12555 23df18356aeb29002ca515935675bf4b 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 1.0E-268 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VPUCM_RS09935 bec2afa881471c7d6f7e6475fc2ae1be 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 2.2E-84 T 22-04-2016 IPR021316 Protein of unknown function DUF2913 VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 PANTHER PTHR30173 57 189 1.1E-25 T 22-04-2016 VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 PANTHER PTHR30173 1 41 1.1E-25 T 22-04-2016 VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 6 187 4.8E-57 T 22-04-2016 IPR011517 RNA polymerase sigma-70 ECF-like VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 Pfam PF07638 ECF sigma factor 6 188 1.4E-29 T 22-04-2016 IPR011517 RNA polymerase sigma-70 ECF-like VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 SUPERFAMILY SSF88659 123 187 3.18E-6 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 2.3E-17 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 PANTHER PTHR30173:SF5 57 189 1.1E-25 T 22-04-2016 VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 PANTHER PTHR30173:SF5 1 41 1.1E-25 T 22-04-2016 VPUCM_RS00295 ce6750658b3c8bb4cf761c3dea4fbb47 190 Gene3D G3DSA:1.10.10.10 142 188 1.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 38 131 1.94E-24 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 565 670 1.57E-31 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82714 182 272 1.28E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PANTHER PTHR32063:SF13 1 1053 0.0 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:1.20.1640.10 295 502 1.2E-57 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82866 296 497 1.44E-48 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:1.10.3850.10 814 1027 1.9E-50 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82714 722 809 9.42E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.70.1430 38 140 2.2E-32 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82866 831 1026 2.49E-41 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.2090.10 722 809 5.4E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.6E-108 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.2090.10 181 275 1.2E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.70.1430 567 670 2.0E-36 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 135 182 7.59E-24 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 672 721 2.88E-26 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 808 856 2.88E-26 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 274 330 7.59E-24 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 PANTHER PTHR32063 1 1053 0.0 T 22-04-2016 VPUCM_RS05910 0946371f22b5a77b2e00fd2ec4511be8 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 VPUCM_RS01680 0c53c730c41101d3aed64d9f1047303b 115 SUPERFAMILY SSF110857 3 114 5.36E-33 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VPUCM_RS01680 0c53c730c41101d3aed64d9f1047303b 115 PANTHER PTHR12510 1 114 2.1E-46 T 22-04-2016 VPUCM_RS01680 0c53c730c41101d3aed64d9f1047303b 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.7E-25 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VPUCM_RS01680 0c53c730c41101d3aed64d9f1047303b 115 Gene3D G3DSA:3.10.490.10 1 114 2.2E-40 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VPUCM_RS01680 0c53c730c41101d3aed64d9f1047303b 115 PANTHER PTHR12510:SF6 1 114 2.1E-46 T 22-04-2016 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 6.2E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 6.2E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 6.2E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 Pfam PF00672 HAMP domain 347 417 8.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 SMART SM00304 366 420 2.7E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 PANTHER PTHR32089 177 698 9.1E-130 T 22-04-2016 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 Gene3D G3DSA:3.30.450.20 190 330 9.4E-12 T 22-04-2016 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 Gene3D G3DSA:1.10.287.950 450 666 6.5E-53 T 22-04-2016 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 506 695 1.4E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 SUPERFAMILY SSF58104 388 697 1.57E-71 T 22-04-2016 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 SMART SM00283 435 696 3.7E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS06245 b8c50fef033784a7330f9b6780392870 698 PANTHER PTHR32089:SF34 177 698 9.1E-130 T 22-04-2016 VPUCM_RS13360 9f343ef5df2f2ccfeefb8aa7a3129226 86 Gene3D G3DSA:1.10.150.250 3 83 1.7E-29 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VPUCM_RS13360 9f343ef5df2f2ccfeefb8aa7a3129226 86 PANTHER PTHR12469 5 62 8.2E-25 T 22-04-2016 VPUCM_RS13360 9f343ef5df2f2ccfeefb8aa7a3129226 86 SUPERFAMILY SSF109910 2 79 4.84E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VPUCM_RS13360 9f343ef5df2f2ccfeefb8aa7a3129226 86 PANTHER PTHR12469:SF3 5 62 8.2E-25 T 22-04-2016 VPUCM_RS13360 9f343ef5df2f2ccfeefb8aa7a3129226 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 1.3E-24 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 PIRSF PIRSF003095 1 434 7.4E-130 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.3E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 PANTHER PTHR30560 1 430 3.8E-141 T 22-04-2016 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:3.30.70.1050 1 118 1.6E-40 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF102735 1 130 3.01E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.3E-42 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF54534 90 241 7.46E-37 T 22-04-2016 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 9.0E-41 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF109998 248 429 1.08E-49 T 22-04-2016 IPR027304 Trigger factor/SurA domain VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:3.10.50.40 155 215 4.1E-9 T 22-04-2016 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 2.0E-143 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 PANTHER PTHR30560:SF3 1 430 3.8E-141 T 22-04-2016 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:1.10.3120.10 216 388 1.0E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VPUCM_RS05120 f26a12b38c3490a805c2e33a45c921d0 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.954 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VPUCM_RS15670 0d3c64a089576d693ccd5aad6b16d982 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 5.6E-38 T 22-04-2016 IPR003744 Protein of unknown function DUF165 VPUCM_RS15670 0d3c64a089576d693ccd5aad6b16d982 222 PANTHER PTHR34300 1 220 5.9E-131 T 22-04-2016 VPUCM_RS15670 0d3c64a089576d693ccd5aad6b16d982 222 PANTHER PTHR34300:SF1 1 220 5.9E-131 T 22-04-2016 VPUCM_RS15670 0d3c64a089576d693ccd5aad6b16d982 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 4.2E-62 T 22-04-2016 IPR003744 Protein of unknown function DUF165 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Gene3D G3DSA:3.40.50.300 3 110 4.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Gene3D G3DSA:3.40.50.300 245 331 4.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01395 18907f191172796d53794751bd11422b 443 SMART SM00382 49 332 6.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS01395 18907f191172796d53794751bd11422b 443 SUPERFAMILY SSF52540 3 441 1.44E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.07 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 PANTHER PTHR11262:SF3 218 443 2.0E-206 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 PANTHER PTHR11262:SF3 1 105 2.0E-206 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.8E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 PANTHER PTHR11262 218 443 2.0E-206 T 22-04-2016 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 PANTHER PTHR11262 1 105 2.0E-206 T 22-04-2016 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 3.6E-222 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Gene3D G3DSA:1.10.8.60 335 443 1.6E-35 T 22-04-2016 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Gene3D G3DSA:1.10.8.10 111 177 9.8E-35 T 22-04-2016 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Gene3D G3DSA:1.10.8.10 213 243 9.8E-35 T 22-04-2016 VPUCM_RS01395 18907f191172796d53794751bd11422b 443 SMART SM01086 335 429 7.0E-20 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 5.9E-5 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS01395 18907f191172796d53794751bd11422b 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 5.6E-43 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 549 579 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 232 366 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 402 491 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 1 162 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031:SF319 186 196 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.0E-24 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 SMART SM00487 1 177 1.6E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 Pfam PF00271 Helicase conserved C-terminal domain 240 343 9.1E-14 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 SMART SM00490 265 344 1.1E-10 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 Gene3D G3DSA:3.40.50.300 2 154 1.5E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 SUPERFAMILY SSF52540 48 173 3.53E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 SUPERFAMILY SSF52540 236 360 3.53E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 Gene3D G3DSA:3.40.50.300 236 364 1.1E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 549 579 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 232 366 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 402 491 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 1 162 4.7E-155 T 22-04-2016 VPUCM_RS09950 4c747ac1703d21191154c0936577229f 583 PANTHER PTHR24031 186 196 4.7E-155 T 22-04-2016 VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 Gene3D G3DSA:3.30.1330.30 2 77 1.5E-25 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 SUPERFAMILY SSF55315 3 77 1.29E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.1E-39 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 PANTHER PTHR12029 4 246 1.3E-79 T 22-04-2016 VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.488 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.2E-86 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 Gene3D G3DSA:3.40.1280.10 91 245 4.3E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 SUPERFAMILY SSF75217 69 245 4.19E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 SMART SM00967 5 81 1.6E-19 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VPUCM_RS14640 6f630d4bcb631d9b17872bbe3fc694de 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 3.0E-19 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 PANTHER PTHR30602:SF3 1 445 6.2E-284 T 22-04-2016 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 PIRSF PIRSF000423 1 445 3.4E-204 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 SUPERFAMILY SSF55729 300 425 1.66E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 5.5E-201 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 Gene3D G3DSA:3.40.630.30 298 441 1.5E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 Gene3D G3DSA:3.40.1160.10 23 294 9.6E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 Pfam PF00583 Acetyltransferase (GNAT) family 344 416 5.9E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 PANTHER PTHR30602 1 445 6.2E-284 T 22-04-2016 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 Pfam PF00696 Amino acid kinase family 25 270 2.7E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.769 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VPUCM_RS04370 3252789cee0be81f8b14e4e0cd263587 445 SUPERFAMILY SSF53633 4 294 1.96E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14450 1bc87ca6c4a30ad60ce926540d347c8e 300 Gene3D G3DSA:3.20.20.220 20 295 7.8E-106 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like VPUCM_RS14450 1bc87ca6c4a30ad60ce926540d347c8e 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 1.8E-100 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VPUCM_RS14450 1bc87ca6c4a30ad60ce926540d347c8e 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 8.1E-103 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VPUCM_RS14450 1bc87ca6c4a30ad60ce926540d347c8e 300 SUPERFAMILY SSF51730 22 294 2.16E-95 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like VPUCM_RS14450 1bc87ca6c4a30ad60ce926540d347c8e 300 PANTHER PTHR21091 149 280 3.1E-42 T 22-04-2016 VPUCM_RS06740 22f3da06f0666dc2bdaf4f3ae98856fe 458 Gene3D G3DSA:3.40.50.300 110 136 9.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06740 22f3da06f0666dc2bdaf4f3ae98856fe 458 Gene3D G3DSA:3.40.50.300 17 30 9.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06740 22f3da06f0666dc2bdaf4f3ae98856fe 458 PIRSF PIRSF019381 1 458 2.8E-201 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VPUCM_RS06740 22f3da06f0666dc2bdaf4f3ae98856fe 458 PANTHER PTHR38605 1 458 5.7E-226 T 22-04-2016 VPUCM_RS06740 22f3da06f0666dc2bdaf4f3ae98856fe 458 PANTHER PTHR38605:SF1 1 458 5.7E-226 T 22-04-2016 VPUCM_RS06740 22f3da06f0666dc2bdaf4f3ae98856fe 458 Pfam PF04317 YcjX-like family, DUF463 20 457 1.7E-189 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VPUCM_RS06740 22f3da06f0666dc2bdaf4f3ae98856fe 458 Gene3D G3DSA:3.40.50.300 31 56 5.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06740 22f3da06f0666dc2bdaf4f3ae98856fe 458 Gene3D G3DSA:3.40.50.300 263 345 5.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14070 8a289289bda35a858068c1ae965b40db 298 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 3.8E-92 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VPUCM_RS14070 8a289289bda35a858068c1ae965b40db 298 PANTHER PTHR34138 1 295 1.8E-84 T 22-04-2016 VPUCM_RS14070 8a289289bda35a858068c1ae965b40db 298 PANTHER PTHR34138:SF1 1 295 1.8E-84 T 22-04-2016 VPUCM_RS14070 8a289289bda35a858068c1ae965b40db 298 PIRSF PIRSF038471 2 284 7.2E-83 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VPUCM_RS14070 8a289289bda35a858068c1ae965b40db 298 Pfam PF04085 rod shape-determining protein MreC 123 269 1.3E-40 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 Gene3D G3DSA:3.40.350.10 7 140 2.6E-23 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 Gene3D G3DSA:3.40.350.10 174 275 2.2E-8 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 SUPERFAMILY SSF53092 164 237 8.2E-5 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 1.7E-39 T 22-04-2016 VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 Pfam PF00557 Metallopeptidase family M24 325 526 5.4E-42 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 Pfam PF16188 C-terminal region of peptidase_M24 537 594 2.5E-23 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 SUPERFAMILY SSF53092 14 139 8.37E-13 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 Gene3D G3DSA:3.90.230.10 306 564 5.6E-55 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 PANTHER PTHR10804 285 594 3.4E-180 T 22-04-2016 VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 PANTHER PTHR10804 3 185 3.4E-180 T 22-04-2016 VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 SUPERFAMILY SSF55920 308 562 2.09E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 136 6.6E-20 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 PANTHER PTHR10804:SF87 285 594 3.4E-180 T 22-04-2016 VPUCM_RS09355 beac7d399d6a60daef239745d54fca7d 598 PANTHER PTHR10804:SF87 3 185 3.4E-180 T 22-04-2016 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 PANTHER PTHR10909:SF321 50 532 1.6E-295 T 22-04-2016 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 Gene3D G3DSA:1.10.540.10 96 235 9.8E-30 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 SUPERFAMILY SSF56645 121 356 2.88E-42 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 PANTHER PTHR10909 50 532 1.6E-295 T 22-04-2016 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 234 2.1E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.7E-116 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 Gene3D G3DSA:2.40.110.10 238 349 5.7E-16 T 22-04-2016 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 SUPERFAMILY SSF47203 361 508 4.99E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 5.0E-13 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VPUCM_RS04790 d2ca9315134bf418ffeaa1f41485c0c8 814 Gene3D G3DSA:1.20.140.10 350 508 6.8E-24 T 22-04-2016 VPUCM_RS11525 19d6e4cea219ab53362db6c43788694c 503 SUPERFAMILY SSF52540 286 477 1.38E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11525 19d6e4cea219ab53362db6c43788694c 503 SMART SM00382 289 442 7.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS11525 19d6e4cea219ab53362db6c43788694c 503 PANTHER PTHR11564:SF3 198 480 2.2E-94 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VPUCM_RS11525 19d6e4cea219ab53362db6c43788694c 503 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 378 7.2E-86 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VPUCM_RS11525 19d6e4cea219ab53362db6c43788694c 503 PANTHER PTHR11564 198 480 2.2E-94 T 22-04-2016 VPUCM_RS11525 19d6e4cea219ab53362db6c43788694c 503 SMART SM00962 290 483 1.3E-63 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS11525 19d6e4cea219ab53362db6c43788694c 503 Gene3D G3DSA:3.40.50.300 289 479 6.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11525 19d6e4cea219ab53362db6c43788694c 503 Pfam PF00448 SRP54-type protein, GTPase domain 292 479 2.8E-38 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS03830 96d57d0abf27949400b859456f67a1a6 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 165 6.2E-45 T 22-04-2016 IPR001405 RadC protein VPUCM_RS03830 96d57d0abf27949400b859456f67a1a6 165 SUPERFAMILY SSF102712 57 132 1.44E-6 T 22-04-2016 VPUCM_RS03830 96d57d0abf27949400b859456f67a1a6 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VPUCM_RS03830 96d57d0abf27949400b859456f67a1a6 165 PANTHER PTHR30471 26 165 1.3E-70 T 22-04-2016 VPUCM_RS03830 96d57d0abf27949400b859456f67a1a6 165 Pfam PF04002 RadC-like JAB domain 44 163 2.0E-44 T 22-04-2016 IPR025657 RadC-like JAB domain VPUCM_RS03830 96d57d0abf27949400b859456f67a1a6 165 PANTHER PTHR30471:SF5 26 165 1.3E-70 T 22-04-2016 VPUCM_RS03830 96d57d0abf27949400b859456f67a1a6 165 Gene3D G3DSA:3.40.140.10 42 165 5.9E-49 T 22-04-2016 VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 Pfam PF13538 UvrD-like helicase C-terminal domain 642 688 1.2E-14 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 26 713 53.284 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 PANTHER PTHR10887 235 415 1.2E-88 T 22-04-2016 VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 SUPERFAMILY SSF52540 540 713 7.17E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 SUPERFAMILY SSF52540 374 472 7.17E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 Gene3D G3DSA:3.40.50.300 240 412 9.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 Gene3D G3DSA:3.40.50.300 444 474 9.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 Pfam PF13604 AAA domain 248 409 2.0E-30 T 22-04-2016 VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 18 713 1.0E-217 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 Gene3D G3DSA:3.40.50.300 634 691 2.8E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 PANTHER PTHR10887:SF351 235 415 1.2E-88 T 22-04-2016 VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 SUPERFAMILY SSF52540 239 454 4.94E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04355 6cde9031a313731843110b0c5bb622c0 715 SUPERFAMILY SSF52540 20 172 4.94E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.8E-29 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 PANTHER PTHR10520 1 426 1.2E-292 T 22-04-2016 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF52440 1 103 7.91E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF51246 329 424 3.4E-33 T 22-04-2016 IPR011054 Rudiment single hybrid motif VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.35 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.8E-35 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.4E-186 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 SMART SM01209 103 296 1.5E-142 T 22-04-2016 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.2E-83 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 SMART SM01210 330 423 2.7E-55 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF56059 104 322 3.18E-68 T 22-04-2016 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.40.50.20 2 95 1.3E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.30.470.20 191 328 6.2E-66 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.30.1490.20 121 190 4.7E-34 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS15155 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.90.600.10 330 423 3.8E-36 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS11890 828c96f2ab820d653a88871782fe8340 529 PANTHER PTHR16254:SF14 3 528 8.4E-156 T 22-04-2016 VPUCM_RS11890 828c96f2ab820d653a88871782fe8340 529 PANTHER PTHR16254 3 528 8.4E-156 T 22-04-2016 VPUCM_RS11890 828c96f2ab820d653a88871782fe8340 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 1.8E-40 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VPUCM_RS11890 828c96f2ab820d653a88871782fe8340 529 Pfam PF02254 TrkA-N domain 388 504 5.9E-19 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VPUCM_RS11890 828c96f2ab820d653a88871782fe8340 529 SUPERFAMILY SSF51735 387 517 3.38E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11890 828c96f2ab820d653a88871782fe8340 529 Gene3D G3DSA:3.40.50.720 380 528 5.5E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 Gene3D G3DSA:1.10.760.10 132 203 1.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 Gene3D G3DSA:1.10.760.10 29 131 2.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 PIRSF PIRSF000005 1 205 1.1E-66 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 SUPERFAMILY SSF46626 6 106 1.38E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 PANTHER PTHR33751 1 205 6.4E-78 T 22-04-2016 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 PANTHER PTHR33751:SF3 1 205 6.4E-78 T 22-04-2016 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 6.6E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 6.6E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 SUPERFAMILY SSF46626 114 203 3.25E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 Pfam PF00034 Cytochrome c 116 201 9.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00550 15d956aac024caf43a9d7a215134baf2 205 Pfam PF00034 Cytochrome c 25 103 3.4E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00275 eabb4de582a22f020b62a8ff97c42986 318 SUPERFAMILY SSF161098 99 300 3.66E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00275 eabb4de582a22f020b62a8ff97c42986 318 Gene3D G3DSA:1.10.3720.10 97 313 1.5E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00275 eabb4de582a22f020b62a8ff97c42986 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 1.5E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VPUCM_RS00275 eabb4de582a22f020b62a8ff97c42986 318 PANTHER PTHR30465:SF67 13 317 9.4E-207 T 22-04-2016 VPUCM_RS00275 eabb4de582a22f020b62a8ff97c42986 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 4.1E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00275 eabb4de582a22f020b62a8ff97c42986 318 PANTHER PTHR30465 13 317 9.4E-207 T 22-04-2016 VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 38 125 2.4E-28 T 22-04-2016 IPR032093 Phospholipase D, N-terminal VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 Gene3D G3DSA:3.60.21.10 147 358 1.0E-10 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 0.0012 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 Pfam PF09423 PhoD-like phosphatase 136 528 2.7E-117 T 22-04-2016 IPR018946 Alkaline phosphatase D-related VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 PANTHER PTHR22953 338 554 3.3E-96 T 22-04-2016 VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 PANTHER PTHR22953 201 308 3.3E-96 T 22-04-2016 VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 PANTHER PTHR22953 28 177 3.3E-96 T 22-04-2016 VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 PANTHER PTHR22953:SF28 338 554 3.3E-96 T 22-04-2016 VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 PANTHER PTHR22953:SF28 201 308 3.3E-96 T 22-04-2016 VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 PANTHER PTHR22953:SF28 28 177 3.3E-96 T 22-04-2016 VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 SUPERFAMILY SSF56300 340 368 5.06E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 SUPERFAMILY SSF56300 136 308 5.06E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS09715 52303310ef8344713861d4dcd44ce6c4 557 SUPERFAMILY SSF56300 416 532 5.06E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 Pfam PF00266 Aminotransferase class-V 24 392 4.2E-150 T 22-04-2016 IPR000192 Aminotransferase class V domain VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 2.9E-167 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 PIRSF PIRSF005572 21 403 1.3E-52 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 Gene3D G3DSA:3.40.640.10 35 282 1.1E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 SUPERFAMILY SSF53383 2 400 3.9E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 5.0E-157 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 PANTHER PTHR11601:SF17 5 403 1.7E-181 T 22-04-2016 VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 PANTHER PTHR11601 5 403 1.7E-181 T 22-04-2016 VPUCM_RS04400 ad4264b43cd3332ebe3c220df14b3cfd 403 Gene3D G3DSA:3.90.1150.10 283 398 2.6E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS16410 21b785f839fc84d13a1736ed481a5497 236 Pfam PF00069 Protein kinase domain 14 215 3.7E-39 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS16410 21b785f839fc84d13a1736ed481a5497 236 PANTHER PTHR24362 3 234 6.0E-49 T 22-04-2016 VPUCM_RS16410 21b785f839fc84d13a1736ed481a5497 236 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 133 145 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VPUCM_RS16410 21b785f839fc84d13a1736ed481a5497 236 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 20 45 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 VPUCM_RS16410 21b785f839fc84d13a1736ed481a5497 236 Gene3D G3DSA:3.30.200.20 9 79 3.5E-18 T 22-04-2016 VPUCM_RS16410 21b785f839fc84d13a1736ed481a5497 236 SMART SM00220 14 234 6.4E-18 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS16410 21b785f839fc84d13a1736ed481a5497 236 Gene3D G3DSA:1.10.510.10 80 208 1.1E-33 T 22-04-2016 VPUCM_RS16410 21b785f839fc84d13a1736ed481a5497 236 SUPERFAMILY SSF56112 8 214 2.97E-52 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PANTHER PTHR30009:SF0 1 416 1.5E-169 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PANTHER PTHR30009:SF0 457 626 1.5E-169 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PANTHER PTHR30009 1 416 1.5E-169 T 22-04-2016 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PANTHER PTHR30009 457 626 1.5E-169 T 22-04-2016 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 620 3.3E-59 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 Pfam PF01578 Cytochrome C assembly protein 89 294 8.5E-40 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS06525 8afe5a4e32191b4dd99c761ff07779b6 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 1.1E-65 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS14210 d2bde2c1df5826d56d75e331bde6dd2c 418 PANTHER PTHR10110 44 417 5.1E-98 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 VPUCM_RS14210 d2bde2c1df5826d56d75e331bde6dd2c 418 PANTHER PTHR10110:SF86 44 417 5.1E-98 T 22-04-2016 VPUCM_RS14210 d2bde2c1df5826d56d75e331bde6dd2c 418 Pfam PF00999 Sodium/hydrogen exchanger family 30 390 1.7E-55 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PANTHER PTHR30070:SF1 2 222 9.2E-72 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.2E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PIRSF PIRSF002764 1 222 4.5E-83 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 PANTHER PTHR30070 2 222 9.2E-72 T 22-04-2016 VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 8.0E-92 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VPUCM_RS11465 f7332c65e93f804812213a53266fc30b 222 Pfam PF03379 CcmB protein 5 219 7.8E-90 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 PANTHER PTHR32071 284 584 1.4E-128 T 22-04-2016 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 Gene3D G3DSA:1.10.8.60 460 519 5.2E-11 T 22-04-2016 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 SUPERFAMILY SSF46689 489 584 7.17E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 SMART SM00382 300 444 1.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 1.2E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 SUPERFAMILY SSF52540 284 512 6.16E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 Gene3D G3DSA:1.10.10.60 520 584 1.5E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 Pfam PF00158 Sigma-54 interaction domain 285 447 1.0E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 Gene3D G3DSA:3.40.50.300 284 451 2.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 Pfam PF01590 GAF domain 75 186 1.9E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 VPUCM_RS08860 baf1126233eb24f01279c9701fd83897 586 PANTHER PTHR32071:SF5 284 584 1.4E-128 T 22-04-2016 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 PANTHER PTHR24423:SF474 8 339 1.5E-109 T 22-04-2016 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 8.41E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 8.41E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 8.41E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 8.41E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF55874 177 336 3.54E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 SMART SM00387 231 337 5.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:3.30.565.10 192 336 5.0E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF47384 111 188 2.94E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 PANTHER PTHR24423 8 339 1.5E-109 T 22-04-2016 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF13188 PAS domain 18 72 4.1E-6 T 22-04-2016 IPR000014 PAS domain VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 336 3.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:1.10.287.130 118 184 2.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF55785 18 85 2.62E-6 T 22-04-2016 IPR000014 PAS domain VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:3.30.450.20 14 117 1.1E-6 T 22-04-2016 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 SMART SM00388 122 188 1.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS11615 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 1.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS03660 9e3b155764a316b27541513708f2c0c4 716 SMART SM00471 91 259 0.001 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS03660 9e3b155764a316b27541513708f2c0c4 716 Pfam PF07514 Putative helicase 32 353 2.7E-124 T 22-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative VPUCM_RS03660 9e3b155764a316b27541513708f2c0c4 716 Gene3D G3DSA:1.10.3210.10 89 253 9.4E-6 T 22-04-2016 IPR006674 HD domain VPUCM_RS03660 9e3b155764a316b27541513708f2c0c4 716 SUPERFAMILY SSF109604 190 254 1.22E-7 T 22-04-2016 VPUCM_RS03660 9e3b155764a316b27541513708f2c0c4 716 SUPERFAMILY SSF109604 96 153 1.22E-7 T 22-04-2016 VPUCM_RS07520 9789d85ef9725b9868c920254b48b9c4 356 Gene3D G3DSA:3.40.50.2000 189 330 5.3E-20 T 22-04-2016 VPUCM_RS07520 9789d85ef9725b9868c920254b48b9c4 356 PANTHER PTHR12526 16 343 1.4E-36 T 22-04-2016 VPUCM_RS07520 9789d85ef9725b9868c920254b48b9c4 356 Pfam PF13579 Glycosyl transferase 4-like domain 26 167 4.9E-16 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VPUCM_RS07520 9789d85ef9725b9868c920254b48b9c4 356 Pfam PF00534 Glycosyl transferases group 1 190 331 2.8E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS07520 9789d85ef9725b9868c920254b48b9c4 356 PANTHER PTHR12526:SF374 16 343 1.4E-36 T 22-04-2016 VPUCM_RS07520 9789d85ef9725b9868c920254b48b9c4 356 SUPERFAMILY SSF53756 19 350 1.35E-55 T 22-04-2016 VPUCM_RS04980 2392a4fd4cda0a0d65e68b564716b4ff 148 PANTHER PTHR31793:SF9 19 140 6.5E-27 T 22-04-2016 VPUCM_RS04980 2392a4fd4cda0a0d65e68b564716b4ff 148 SUPERFAMILY SSF54637 10 144 2.37E-30 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS04980 2392a4fd4cda0a0d65e68b564716b4ff 148 Pfam PF13279 Thioesterase-like superfamily 19 124 2.1E-12 T 22-04-2016 VPUCM_RS04980 2392a4fd4cda0a0d65e68b564716b4ff 148 Gene3D G3DSA:3.10.129.10 13 137 2.1E-34 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS04980 2392a4fd4cda0a0d65e68b564716b4ff 148 PANTHER PTHR31793 19 140 6.5E-27 T 22-04-2016 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 PANTHER PTHR32338 1 334 3.4E-149 T 22-04-2016 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 SUPERFAMILY SSF51735 1 169 1.73E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 SMART SM00859 3 146 5.0E-45 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 SUPERFAMILY SSF55347 154 308 1.57E-50 T 22-04-2016 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 Gene3D G3DSA:3.40.50.720 1 162 1.0E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.7E-119 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 Gene3D G3DSA:3.30.360.10 163 308 4.6E-50 T 22-04-2016 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 165 311 1.8E-14 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 146 8.3E-33 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VPUCM_RS14430 ad0a13870762a774ad0de579767aea30 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.169 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS15015 91e4d5013af9937b6ef10adf9b242c83 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 5.1E-258 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily VPUCM_RS15015 91e4d5013af9937b6ef10adf9b242c83 575 Pfam PF00474 Sodium:solute symporter family 373 491 1.4E-16 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS15015 91e4d5013af9937b6ef10adf9b242c83 575 Pfam PF00474 Sodium:solute symporter family 33 296 1.9E-36 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS15015 91e4d5013af9937b6ef10adf9b242c83 575 PANTHER PTHR11819:SF159 341 566 2.0E-203 T 22-04-2016 VPUCM_RS15015 91e4d5013af9937b6ef10adf9b242c83 575 PANTHER PTHR11819:SF159 4 308 2.0E-203 T 22-04-2016 VPUCM_RS15015 91e4d5013af9937b6ef10adf9b242c83 575 PANTHER PTHR11819 341 566 2.0E-203 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS15015 91e4d5013af9937b6ef10adf9b242c83 575 PANTHER PTHR11819 4 308 2.0E-203 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS00345 92709be3d8e6f321f71ec6e7f10817ff 203 PANTHER PTHR30246:SF5 1 202 1.9E-130 T 22-04-2016 VPUCM_RS00345 92709be3d8e6f321f71ec6e7f10817ff 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VPUCM_RS00345 92709be3d8e6f321f71ec6e7f10817ff 203 Pfam PF01081 KDPG and KHG aldolase 5 197 1.8E-72 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VPUCM_RS00345 92709be3d8e6f321f71ec6e7f10817ff 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 2.4E-82 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VPUCM_RS00345 92709be3d8e6f321f71ec6e7f10817ff 203 SUPERFAMILY SSF51569 3 201 4.4E-66 T 22-04-2016 VPUCM_RS00345 92709be3d8e6f321f71ec6e7f10817ff 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 VPUCM_RS00345 92709be3d8e6f321f71ec6e7f10817ff 203 Gene3D G3DSA:3.20.20.70 2 201 2.1E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS00345 92709be3d8e6f321f71ec6e7f10817ff 203 PANTHER PTHR30246 1 202 1.9E-130 T 22-04-2016 VPUCM_RS14990 d18d573f80f5c763eb35195354eeea8f 435 PANTHER PTHR36106 1 435 1.6E-289 T 22-04-2016 VPUCM_RS14990 d18d573f80f5c763eb35195354eeea8f 435 PIRSF PIRSF004539 1 435 5.2E-177 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VPUCM_RS14990 d18d573f80f5c763eb35195354eeea8f 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 8.3E-180 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VPUCM_RS14990 d18d573f80f5c763eb35195354eeea8f 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 1.8E-145 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VPUCM_RS14990 d18d573f80f5c763eb35195354eeea8f 435 PANTHER PTHR36106:SF2 1 435 1.6E-289 T 22-04-2016 VPUCM_RS15965 73b3466414a1c1d4fae72d93040dbf16 312 Gene3D G3DSA:3.20.10.10 134 295 3.3E-59 T 22-04-2016 VPUCM_RS15965 73b3466414a1c1d4fae72d93040dbf16 312 SUPERFAMILY SSF56752 7 307 2.09E-102 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VPUCM_RS15965 73b3466414a1c1d4fae72d93040dbf16 312 Pfam PF01063 Amino-transferase class IV 36 268 3.6E-44 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VPUCM_RS15965 73b3466414a1c1d4fae72d93040dbf16 312 PANTHER PTHR11825 1 306 1.4E-126 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VPUCM_RS15965 73b3466414a1c1d4fae72d93040dbf16 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 3.7E-142 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 VPUCM_RS15965 73b3466414a1c1d4fae72d93040dbf16 312 PANTHER PTHR11825:SF7 1 306 1.4E-126 T 22-04-2016 VPUCM_RS15965 73b3466414a1c1d4fae72d93040dbf16 312 Gene3D G3DSA:3.30.470.10 7 130 3.6E-42 T 22-04-2016 VPUCM_RS15965 73b3466414a1c1d4fae72d93040dbf16 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VPUCM_RS06035 0a27d1d75a9006e01b9a6365346046ff 139 Gene3D G3DSA:3.10.450.50 4 134 1.4E-21 T 22-04-2016 IPR032710 NTF2-like domain VPUCM_RS06035 0a27d1d75a9006e01b9a6365346046ff 139 SUPERFAMILY SSF54427 5 129 2.48E-23 T 22-04-2016 IPR032710 NTF2-like domain VPUCM_RS06035 0a27d1d75a9006e01b9a6365346046ff 139 Pfam PF12680 SnoaL-like domain 8 108 3.2E-13 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain VPUCM_RS12820 6cfe87a57d2e642af4ad4b42f9062511 341 SUPERFAMILY SSF53335 152 332 6.49E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12820 6cfe87a57d2e642af4ad4b42f9062511 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.596 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS12820 6cfe87a57d2e642af4ad4b42f9062511 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS12820 6cfe87a57d2e642af4ad4b42f9062511 341 Pfam PF05175 Methyltransferase small domain 172 336 2.3E-61 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VPUCM_RS12820 6cfe87a57d2e642af4ad4b42f9062511 341 Gene3D G3DSA:3.40.50.150 169 335 3.4E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12820 6cfe87a57d2e642af4ad4b42f9062511 341 PANTHER PTHR18895:SF70 78 336 1.1E-108 T 22-04-2016 VPUCM_RS12820 6cfe87a57d2e642af4ad4b42f9062511 341 PANTHER PTHR18895 78 336 1.1E-108 T 22-04-2016 VPUCM_RS12820 6cfe87a57d2e642af4ad4b42f9062511 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 2.8E-57 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.6E-13 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PANTHER PTHR22600 567 774 1.5E-253 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PANTHER PTHR22600 151 392 1.5E-253 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PANTHER PTHR22600 792 882 1.5E-253 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PANTHER PTHR22600 415 538 1.5E-253 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 6.6E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 7.2E-28 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 Gene3D G3DSA:2.60.40.290 26 167 1.5E-61 T 22-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 SMART SM01081 34 195 6.0E-93 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 SUPERFAMILY SSF81296 781 882 3.22E-37 T 22-04-2016 IPR014756 Immunoglobulin E-set VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 3.9E-62 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 Gene3D G3DSA:2.60.40.320 833 882 2.0E-27 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 SUPERFAMILY SSF55545 208 331 7.63E-23 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 9.8E-109 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PANTHER PTHR22600:SF12 567 774 1.5E-253 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PANTHER PTHR22600:SF12 151 392 1.5E-253 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PANTHER PTHR22600:SF12 792 882 1.5E-253 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 PANTHER PTHR22600:SF12 415 538 1.5E-253 T 22-04-2016 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 Gene3D G3DSA:3.30.379.10 207 329 6.4E-23 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 Gene3D G3DSA:3.20.20.80 330 832 2.0E-157 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 SUPERFAMILY SSF51445 332 772 2.82E-143 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS12235 dbbe35889a84588068d353fa4acb420d 883 SUPERFAMILY SSF49384 26 198 1.69E-65 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF13500 AAA domain 3 229 3.7E-51 T 22-04-2016 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF75138 229 353 1.18E-23 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF53659 392 709 2.22E-96 T 22-04-2016 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.50.10750 524 682 8.6E-69 T 22-04-2016 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.3E-125 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 PANTHER PTHR23406 178 714 9.7E-56 T 22-04-2016 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.50.300 2 222 2.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF52540 1 240 1.33E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 PIRSF PIRSF006107 1 714 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 PANTHER PTHR23406:SF3 178 714 9.7E-56 T 22-04-2016 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF07085 DRTGG domain 233 344 8.9E-27 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.1390.20 226 364 2.7E-27 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like VPUCM_RS05710 ccb74bf723d39b610e1c9049eefa485f 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.2E-132 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 Gene3D G3DSA:3.90.780.10 367 542 1.3E-52 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 SUPERFAMILY SSF56300 32 364 2.8E-95 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 7.3E-24 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 6.1E-34 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 PANTHER PTHR11575:SF27 1 553 4.1E-234 T 22-04-2016 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 Gene3D G3DSA:3.60.21.10 32 364 1.5E-98 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 SUPERFAMILY SSF55816 366 542 3.53E-52 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 PANTHER PTHR11575 1 553 4.1E-234 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 PRINTS PR01607 Apyrase family signature 36 54 1.3E-51 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 PRINTS PR01607 Apyrase family signature 487 506 1.3E-51 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 PRINTS PR01607 Apyrase family signature 420 443 1.3E-51 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 PRINTS PR01607 Apyrase family signature 287 307 1.3E-51 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 PRINTS PR01607 Apyrase family signature 242 265 1.3E-51 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS12270 bb03a0e066f6f071a8806bb773f0962b 560 PRINTS PR01607 Apyrase family signature 211 228 1.3E-51 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS02510 d808ade8cfe593f50cfd36f9d10c9d05 262 Gene3D G3DSA:3.40.30.10 126 261 1.5E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS02510 d808ade8cfe593f50cfd36f9d10c9d05 262 PANTHER PTHR35272:SF3 3 261 2.0E-89 T 22-04-2016 VPUCM_RS02510 d808ade8cfe593f50cfd36f9d10c9d05 262 Gene3D G3DSA:3.10.450.70 44 101 7.2E-22 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VPUCM_RS02510 d808ade8cfe593f50cfd36f9d10c9d05 262 SUPERFAMILY SSF54423 44 100 4.19E-14 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VPUCM_RS02510 d808ade8cfe593f50cfd36f9d10c9d05 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 99 1.1E-12 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VPUCM_RS02510 d808ade8cfe593f50cfd36f9d10c9d05 262 PANTHER PTHR35272 3 261 2.0E-89 T 22-04-2016 VPUCM_RS02510 d808ade8cfe593f50cfd36f9d10c9d05 262 Pfam PF13098 Thioredoxin-like domain 131 259 5.3E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS02510 d808ade8cfe593f50cfd36f9d10c9d05 262 SUPERFAMILY SSF52833 122 261 3.95E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS04415 6aec9efc41466a121446c4a767c1c89b 272 Gene3D G3DSA:2.40.230.20 23 272 7.2E-102 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VPUCM_RS04415 6aec9efc41466a121446c4a767c1c89b 272 SUPERFAMILY SSF111364 30 272 4.05E-82 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VPUCM_RS04415 6aec9efc41466a121446c4a767c1c89b 272 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 272 9.5E-98 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VPUCM_RS04045 7c2ebb56724f1c35f63305732f559326 257 PIRSF PIRSF005902 1 257 5.6E-66 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS04045 7c2ebb56724f1c35f63305732f559326 257 SUPERFAMILY SSF51556 1 255 1.91E-77 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPUCM_RS04045 7c2ebb56724f1c35f63305732f559326 257 Pfam PF01026 TatD related DNase 4 253 5.8E-66 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS04045 7c2ebb56724f1c35f63305732f559326 257 PANTHER PTHR10060 1 257 8.4E-89 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS04045 7c2ebb56724f1c35f63305732f559326 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VPUCM_RS04045 7c2ebb56724f1c35f63305732f559326 257 Gene3D G3DSA:3.20.20.140 1 255 1.2E-79 T 22-04-2016 VPUCM_RS04045 7c2ebb56724f1c35f63305732f559326 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VPUCM_RS09210 2050bbf9ea7847edc2c5524505172f86 425 PANTHER PTHR13847:SF210 1 425 4.4E-209 T 22-04-2016 VPUCM_RS09210 2050bbf9ea7847edc2c5524505172f86 425 SUPERFAMILY SSF51905 28 251 1.47E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09210 2050bbf9ea7847edc2c5524505172f86 425 SUPERFAMILY SSF51905 353 409 1.47E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09210 2050bbf9ea7847edc2c5524505172f86 425 PANTHER PTHR13847 1 425 4.4E-209 T 22-04-2016 VPUCM_RS09210 2050bbf9ea7847edc2c5524505172f86 425 Gene3D G3DSA:3.50.50.60 171 251 1.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09210 2050bbf9ea7847edc2c5524505172f86 425 Gene3D G3DSA:3.50.50.60 343 400 1.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09210 2050bbf9ea7847edc2c5524505172f86 425 Gene3D G3DSA:3.50.50.60 15 118 1.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09210 2050bbf9ea7847edc2c5524505172f86 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 4.5E-54 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 PANTHER PTHR21091 1 351 5.8E-163 T 22-04-2016 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 SUPERFAMILY SSF51726 1 354 2.79E-123 T 22-04-2016 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.771 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.4E-139 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 Gene3D G3DSA:3.20.20.210 2 353 2.9E-155 T 22-04-2016 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.2E-141 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15190 ef4b959889a1885da279edc9582eec5e 355 PANTHER PTHR21091:SF2 1 351 5.8E-163 T 22-04-2016 VPUCM_RS09410 ae38178fc4e083cd1da74fb88671b9cb 508 Gene3D G3DSA:3.40.605.10 4 255 1.2E-46 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09410 ae38178fc4e083cd1da74fb88671b9cb 508 SUPERFAMILY SSF53720 6 502 7.98E-102 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09410 ae38178fc4e083cd1da74fb88671b9cb 508 Pfam PF00171 Aldehyde dehydrogenase family 7 452 5.7E-49 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09410 ae38178fc4e083cd1da74fb88671b9cb 508 Gene3D G3DSA:3.40.309.10 257 440 8.1E-51 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS09410 ae38178fc4e083cd1da74fb88671b9cb 508 PANTHER PTHR11699:SF10 8 505 3.0E-124 T 22-04-2016 VPUCM_RS09410 ae38178fc4e083cd1da74fb88671b9cb 508 PANTHER PTHR11699 8 505 3.0E-124 T 22-04-2016 VPUCM_RS14580 cd246ae55cf2a94743c9343dbe60c782 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 5.2E-34 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VPUCM_RS14580 cd246ae55cf2a94743c9343dbe60c782 70 Gene3D G3DSA:1.10.10.610 1 70 1.0E-35 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VPUCM_RS14580 cd246ae55cf2a94743c9343dbe60c782 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.6 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VPUCM_RS14580 cd246ae55cf2a94743c9343dbe60c782 70 PIRSF PIRSF006169 1 70 5.9E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VPUCM_RS14580 cd246ae55cf2a94743c9343dbe60c782 70 SUPERFAMILY SSF118001 1 69 4.97E-28 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VPUCM_RS14580 cd246ae55cf2a94743c9343dbe60c782 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 53 5.0E-24 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VPUCM_RS11910 609e408a77db5ec965fbf314762103bb 320 Pfam PF00762 Ferrochelatase 6 319 1.2E-110 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VPUCM_RS11910 609e408a77db5ec965fbf314762103bb 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 320 1.2E-106 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VPUCM_RS11910 609e408a77db5ec965fbf314762103bb 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VPUCM_RS11910 609e408a77db5ec965fbf314762103bb 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 38.75 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VPUCM_RS11910 609e408a77db5ec965fbf314762103bb 320 PANTHER PTHR11108 4 320 8.2E-134 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VPUCM_RS11910 609e408a77db5ec965fbf314762103bb 320 SUPERFAMILY SSF53800 4 319 2.62E-106 T 22-04-2016 VPUCM_RS11910 609e408a77db5ec965fbf314762103bb 320 Gene3D G3DSA:3.40.50.1400 202 320 3.8E-35 T 22-04-2016 VPUCM_RS11910 609e408a77db5ec965fbf314762103bb 320 Gene3D G3DSA:3.40.50.1400 4 201 4.8E-68 T 22-04-2016 VPUCM_RS05735 59c50e168efa7ab46a7f06d66717206f 264 Pfam PF00005 ABC transporter 22 177 5.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS05735 59c50e168efa7ab46a7f06d66717206f 264 PANTHER PTHR24220:SF534 3 251 8.3E-131 T 22-04-2016 VPUCM_RS05735 59c50e168efa7ab46a7f06d66717206f 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS05735 59c50e168efa7ab46a7f06d66717206f 264 PANTHER PTHR24220 3 251 8.3E-131 T 22-04-2016 VPUCM_RS05735 59c50e168efa7ab46a7f06d66717206f 264 SUPERFAMILY SSF52540 2 231 3.62E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05735 59c50e168efa7ab46a7f06d66717206f 264 Gene3D G3DSA:3.40.50.300 1 231 9.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05735 59c50e168efa7ab46a7f06d66717206f 264 SMART SM00382 31 226 8.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:1.10.486.10 383 516 2.4E-41 T 22-04-2016 VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.995 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 SUPERFAMILY SSF52540 1 640 3.87E-163 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.6E-73 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 8.6E-78 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 182 279 5.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 2 104 5.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 PANTHER PTHR11070:SF19 1 669 0.0 T 22-04-2016 VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:1.10.10.160 108 181 3.4E-26 T 22-04-2016 IPR013986 DExx box DNA helicase domain VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 280 382 2.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 552 641 2.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 PANTHER PTHR11070 1 669 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VPUCM_RS00215 caf78b231f249f54d5a0e1a69d983eed 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.229 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 SUPERFAMILY SSF55681 118 429 1.94E-97 T 22-04-2016 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 PANTHER PTHR11778:SF0 1 434 6.3E-210 T 22-04-2016 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 Gene3D G3DSA:1.10.287.40 1 106 5.6E-23 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 PANTHER PTHR11778 1 434 6.3E-210 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 PIRSF PIRSF001529 1 435 7.1E-187 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 SUPERFAMILY SSF46589 1 114 2.93E-27 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.5E-29 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 Gene3D G3DSA:3.30.930.10 107 431 2.1E-138 T 22-04-2016 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 3.7E-35 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS05985 372cfce916e1cc5c80b52ba4981c1c49 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 5.3E-172 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 Gene3D G3DSA:3.30.70.270 149 310 3.9E-55 T 22-04-2016 VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 PANTHER PTHR10799:SF750 62 305 3.8E-35 T 22-04-2016 VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 SUPERFAMILY SSF55073 152 307 1.02E-48 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 307 3.2E-50 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 Gene3D G3DSA:3.30.450.20 4 134 1.9E-10 T 22-04-2016 VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 PANTHER PTHR10799 62 305 3.8E-35 T 22-04-2016 VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 304 2.9E-44 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 SMART SM00267 136 308 1.6E-51 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS15100 94e1ef8aea1de31905ac83a7bc160007 329 SUPERFAMILY SSF55785 4 134 2.47E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS12635 b37c521d234d3ed74dc7fbffe975dad2 132 PANTHER PTHR10584:SF191 6 67 3.8E-15 T 22-04-2016 VPUCM_RS12635 b37c521d234d3ed74dc7fbffe975dad2 132 PANTHER PTHR10584 6 67 3.8E-15 T 22-04-2016 VPUCM_RS12635 b37c521d234d3ed74dc7fbffe975dad2 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 2.0E-28 T 22-04-2016 IPR006696 Protein of unknown function DUF423 VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.230.10 78 159 1.4E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.160.20 10 73 1.6E-30 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 5.9E-29 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.2E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 PANTHER PTHR13718 10 163 1.0E-79 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.556 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.0E-69 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VPUCM_RS01515 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 PANTHER PTHR33308:SF3 11 301 2.2E-38 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 SMART SM00047 146 307 6.2E-49 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 Pfam PF10135 Rod binding protein 53 102 3.3E-15 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 PANTHER PTHR33308 11 301 2.2E-38 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 Gene3D G3DSA:1.10.530.10 148 206 9.0E-5 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 169 305 2.7E-21 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 305 4.7E-129 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.8E-28 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 182 200 1.8E-28 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.8E-28 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 245 266 1.8E-28 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 288 306 1.8E-28 T 22-04-2016 VPUCM_RS12105 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 223 244 1.8E-28 T 22-04-2016 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 PANTHER PTHR22648:SF0 1 448 3.9E-186 T 22-04-2016 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.5E-125 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.9E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.8E-22 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 SMART SM00316 133 198 9.4E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:1.10.150.20 356 420 1.5E-22 T 22-04-2016 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:1.10.150.20 429 493 6.1E-24 T 22-04-2016 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF69705 1 126 2.49E-40 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.300.20 199 277 8.4E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF54814 201 278 6.34E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.300.20 278 347 1.2E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.2E-8 T 22-04-2016 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF13184 NusA-like KH domain 230 297 4.1E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:2.40.50.140 128 197 1.1E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.773 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.1480.10 1 124 3.7E-44 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 PANTHER PTHR22648 1 448 3.9E-186 T 22-04-2016 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF47794 429 492 1.0E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF08529 NusA N-terminal domain 4 123 1.7E-35 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF47794 356 415 7.06E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VPUCM_RS03415 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VPUCM_RS10815 784d8ea8a10fdacf9a38f0947c83d6ad 215 PANTHER PTHR34227:SF1 1 212 4.7E-73 T 22-04-2016 VPUCM_RS10815 784d8ea8a10fdacf9a38f0947c83d6ad 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.681 T 22-04-2016 IPR023069 Chaperone TorD VPUCM_RS10815 784d8ea8a10fdacf9a38f0947c83d6ad 215 SUPERFAMILY SSF89155 8 212 1.16E-51 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS10815 784d8ea8a10fdacf9a38f0947c83d6ad 215 Pfam PF02613 Nitrate reductase delta subunit 50 183 1.5E-36 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS10815 784d8ea8a10fdacf9a38f0947c83d6ad 215 PANTHER PTHR34227 1 212 4.7E-73 T 22-04-2016 VPUCM_RS10815 784d8ea8a10fdacf9a38f0947c83d6ad 215 Gene3D G3DSA:1.10.3480.10 2 212 2.8E-48 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS15140 b167fa2280efb6c2d3d9b71ba826f3af 522 PANTHER PTHR26402:SF557 7 103 2.5E-17 T 22-04-2016 VPUCM_RS15140 b167fa2280efb6c2d3d9b71ba826f3af 522 Gene3D G3DSA:1.25.40.10 340 485 1.9E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS15140 b167fa2280efb6c2d3d9b71ba826f3af 522 SUPERFAMILY SSF48452 338 485 3.25E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS15140 b167fa2280efb6c2d3d9b71ba826f3af 522 SUPERFAMILY SSF46894 6 103 8.79E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS15140 b167fa2280efb6c2d3d9b71ba826f3af 522 Gene3D G3DSA:1.10.10.10 7 103 7.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15140 b167fa2280efb6c2d3d9b71ba826f3af 522 PANTHER PTHR26402 7 103 2.5E-17 T 22-04-2016 VPUCM_RS15140 b167fa2280efb6c2d3d9b71ba826f3af 522 SMART SM00862 24 100 1.8E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS15140 b167fa2280efb6c2d3d9b71ba826f3af 522 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 4.2E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS12630 9426db590bbe190f535c0bca114fb4df 363 PANTHER PTHR37524 2 362 3.3E-193 T 22-04-2016 VPUCM_RS12630 9426db590bbe190f535c0bca114fb4df 363 PANTHER PTHR37524:SF2 2 362 3.3E-193 T 22-04-2016 VPUCM_RS12630 9426db590bbe190f535c0bca114fb4df 363 PIRSF PIRSF028774 1 362 2.5E-193 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VPUCM_RS12630 9426db590bbe190f535c0bca114fb4df 363 Gene3D G3DSA:3.40.50.150 186 281 4.4E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12630 9426db590bbe190f535c0bca114fb4df 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.7E-5 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VPUCM_RS12630 9426db590bbe190f535c0bca114fb4df 363 SUPERFAMILY SSF53335 186 298 1.31E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12630 9426db590bbe190f535c0bca114fb4df 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.409 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:1.10.300.10 103 195 2.7E-38 T 22-04-2016 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 SMART SM00788 4 431 0.0 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 PANTHER PTHR11846 1 435 3.1E-259 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 220.46 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:3.90.170.10 267 431 3.7E-64 T 22-04-2016 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 6.2E-193 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:3.40.440.10 196 266 3.1E-72 T 22-04-2016 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:3.40.440.10 4 94 3.1E-72 T 22-04-2016 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 SUPERFAMILY SSF52540 3 436 1.01E-179 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.0E-176 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VPUCM_RS14665 d2021b22f6e2f83212ce78f48e5ef408 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 Gene3D G3DSA:1.10.1660.10 58 132 3.8E-25 T 22-04-2016 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.4E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 SMART SM00422 2 71 4.1E-30 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 7.3E-70 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 Gene3D G3DSA:1.10.1660.10 1 57 1.8E-27 T 22-04-2016 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 PANTHER PTHR30204:SF18 1 132 1.9E-53 T 22-04-2016 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 PANTHER PTHR30204 1 132 1.9E-53 T 22-04-2016 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 SUPERFAMILY SSF46955 2 121 4.76E-34 T 22-04-2016 IPR009061 Putative DNA-binding domain VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VPUCM_RS15145 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 Gene3D G3DSA:1.10.10.10 124 217 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 PANTHER PTHR26402 1 217 9.4E-102 T 22-04-2016 VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 SMART SM00862 145 216 4.5E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 PANTHER PTHR26402:SF518 1 217 9.4E-102 T 22-04-2016 VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 Gene3D G3DSA:3.40.50.2300 1 123 3.9E-35 T 22-04-2016 VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 7.0E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 Pfam PF00072 Response regulator receiver domain 4 112 5.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 SUPERFAMILY SSF52172 1 173 5.71E-36 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS09015 ebb12445966cf44bb0431663a4b53727 218 SMART SM00448 1 112 1.1E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 PANTHER PTHR10264:SF51 7 386 1.1E-193 T 22-04-2016 IPR010201 HflK GO:0016021 VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 Pfam PF01145 SPFH domain / Band 7 family 92 263 4.9E-30 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 SUPERFAMILY SSF117892 125 253 9.42E-22 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 TIGRFAM TIGR01933 hflK: HflK protein 90 350 1.5E-121 T 22-04-2016 IPR010201 HflK GO:0016021 VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 95 117 1.3E-6 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 198 221 1.3E-6 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 142 163 1.3E-6 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 SMART SM00244 88 248 2.1E-52 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 PANTHER PTHR10264 7 386 1.1E-193 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS14680 2d371387a4767901846a0645ed8092d3 400 Pfam PF12221 Bacterial membrane protein N terminal 1 58 6.0E-14 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal VPUCM_RS04695 736da123e7377a2da8676615e86e2d96 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 41.857 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VPUCM_RS04695 736da123e7377a2da8676615e86e2d96 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 1.9E-143 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VPUCM_RS04695 736da123e7377a2da8676615e86e2d96 379 PANTHER PTHR30372:SF0 1 378 5.9E-134 T 22-04-2016 VPUCM_RS04695 736da123e7377a2da8676615e86e2d96 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 2.3E-130 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VPUCM_RS04695 736da123e7377a2da8676615e86e2d96 379 PANTHER PTHR30372 1 378 5.9E-134 T 22-04-2016 VPUCM_RS04695 736da123e7377a2da8676615e86e2d96 379 SUPERFAMILY SSF53756 6 379 9.42E-27 T 22-04-2016 VPUCM_RS04695 736da123e7377a2da8676615e86e2d96 379 Gene3D G3DSA:3.40.50.2000 162 346 6.0E-5 T 22-04-2016 VPUCM_RS01230 7a904188d3335b13eb084a54ec6a7314 293 PANTHER PTHR22572 4 271 5.6E-161 T 22-04-2016 VPUCM_RS01230 7a904188d3335b13eb084a54ec6a7314 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 1.7E-146 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VPUCM_RS01230 7a904188d3335b13eb084a54ec6a7314 293 Gene3D G3DSA:3.90.550.10 1 266 5.4E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01230 7a904188d3335b13eb084a54ec6a7314 293 Pfam PF00483 Nucleotidyl transferase 4 238 1.1E-70 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VPUCM_RS01230 7a904188d3335b13eb084a54ec6a7314 293 PANTHER PTHR22572:SF105 4 271 5.6E-161 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VPUCM_RS01230 7a904188d3335b13eb084a54ec6a7314 293 SUPERFAMILY SSF53448 2 289 1.67E-90 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 PANTHER PTHR22642 54 411 1.4E-139 T 22-04-2016 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 SUPERFAMILY SSF51556 72 371 3.1E-83 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 PANTHER PTHR22642:SF1 54 411 1.4E-139 T 22-04-2016 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.491 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 Gene3D G3DSA:3.20.20.140 83 356 4.0E-39 T 22-04-2016 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 409 7.5E-150 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 Pfam PF01979 Amidohydrolase family 70 408 7.6E-15 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 Gene3D G3DSA:2.30.40.10 357 395 4.7E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 SUPERFAMILY SSF51338 373 412 1.89E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 SUPERFAMILY SSF51338 1 72 1.89E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS09645 087d9c7a47a372c9906b792fd1142029 416 Gene3D G3DSA:2.30.40.10 1 82 1.9E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS01195 7cd23804076e3319322d9106840a6c34 240 Pfam PF13462 Thioredoxin 63 213 8.8E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS01195 7cd23804076e3319322d9106840a6c34 240 Gene3D G3DSA:3.40.30.10 58 228 8.1E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS01195 7cd23804076e3319322d9106840a6c34 240 PANTHER PTHR13887 41 208 6.0E-30 T 22-04-2016 VPUCM_RS01195 7cd23804076e3319322d9106840a6c34 240 SUPERFAMILY SSF52833 54 212 1.01E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 PANTHER PTHR23083 257 389 1.2E-80 T 22-04-2016 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 PANTHER PTHR23083 1 219 1.2E-80 T 22-04-2016 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 SUPERFAMILY SSF48452 245 294 4.11E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 SUPERFAMILY SSF48452 85 215 4.11E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 SMART SM00028 327 360 0.0011 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 1.8E-109 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 SUPERFAMILY SSF48452 263 389 1.19E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 Gene3D G3DSA:1.25.40.10 270 389 5.1E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 Gene3D G3DSA:1.25.40.10 85 203 4.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 PANTHER PTHR23083:SF396 257 389 1.2E-80 T 22-04-2016 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 PANTHER PTHR23083:SF396 1 219 1.2E-80 T 22-04-2016 VPUCM_RS15610 d1b304397057eb3e1e32ecb8c21cce9e 393 Pfam PF07219 HemY protein N-terminus 26 132 4.6E-27 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 SMART SM00862 156 232 1.8E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 Gene3D G3DSA:3.40.50.2300 4 125 6.3E-42 T 22-04-2016 VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 SMART SM00448 5 116 3.8E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.9E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 Gene3D G3DSA:1.10.10.10 133 235 2.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 PANTHER PTHR26402:SF292 5 235 1.1E-113 T 22-04-2016 VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 PANTHER PTHR26402 5 235 1.1E-113 T 22-04-2016 VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 SUPERFAMILY SSF46894 132 234 2.44E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS00770 bf80c1b9c8df171bf3f592e22978dcbf 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Gene3D G3DSA:3.40.50.300 596 826 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 SMART SM00382 642 789 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 SMART SM00382 302 449 7.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Gene3D G3DSA:3.40.50.300 263 448 3.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 SUPERFAMILY SSF81923 112 249 2.26E-24 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 PANTHER PTHR11638 101 928 0.0 T 22-04-2016 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 676 694 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 307 440 2.5E-15 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Pfam PF07724 AAA domain (Cdc48 subfamily) 641 810 1.0E-51 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 PANTHER PTHR11638:SF80 101 928 0.0 T 22-04-2016 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 SUPERFAMILY SSF52540 591 890 1.81E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 691 709 1.4E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 753 767 1.4E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 738 1.4E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.4E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 SUPERFAMILY SSF52540 263 571 3.21E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Gene3D G3DSA:1.10.8.60 827 915 6.4E-24 T 22-04-2016 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 200 248 2.0E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 123 171 5.5E-8 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 SMART SM01086 816 907 6.1E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 816 893 8.5E-21 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Gene3D G3DSA:1.10.8.60 450 534 4.8E-32 T 22-04-2016 VPUCM_RS03585 40bc678e777827aa7f55046989018554 949 Gene3D G3DSA:1.10.1780.10 111 248 2.4E-35 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS00545 a7f99f3749c2f6ac980768dec828bae4 219 SUPERFAMILY SSF52540 6 197 7.83E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00545 a7f99f3749c2f6ac980768dec828bae4 219 PANTHER PTHR11649 11 211 2.0E-54 T 22-04-2016 VPUCM_RS00545 a7f99f3749c2f6ac980768dec828bae4 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.582 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 VPUCM_RS00545 a7f99f3749c2f6ac980768dec828bae4 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 2.7E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS00545 a7f99f3749c2f6ac980768dec828bae4 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.9E-74 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 VPUCM_RS00545 a7f99f3749c2f6ac980768dec828bae4 219 Gene3D G3DSA:3.40.50.300 7 197 4.9E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14110 364de6ec48702a6606ef24baffee6c62 169 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 9.6E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS14110 364de6ec48702a6606ef24baffee6c62 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS14110 364de6ec48702a6606ef24baffee6c62 169 PANTHER PTHR30093 1 60 7.4E-26 T 22-04-2016 VPUCM_RS14110 364de6ec48702a6606ef24baffee6c62 169 PANTHER PTHR30093:SF7 1 60 7.4E-26 T 22-04-2016 VPUCM_RS14110 364de6ec48702a6606ef24baffee6c62 169 SUPERFAMILY SSF54523 7 50 2.67E-12 T 22-04-2016 VPUCM_RS14110 364de6ec48702a6606ef24baffee6c62 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 8.3E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS14110 364de6ec48702a6606ef24baffee6c62 169 Gene3D G3DSA:3.30.700.10 7 98 6.9E-6 T 22-04-2016 VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 SUPERFAMILY SSF52540 180 320 4.12E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 235 253 2.3E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 309 320 2.3E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 280 298 2.3E-29 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 Gene3D G3DSA:3.40.50.300 184 320 3.1E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 265 283 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 Gene3D G3DSA:1.10.8.60 1 62 3.4E-23 T 22-04-2016 VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 SUPERFAMILY SSF52540 1 179 5.31E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 PANTHER PTHR11638 1 320 2.4E-189 T 22-04-2016 VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 PANTHER PTHR11638:SF18 1 320 2.4E-189 T 22-04-2016 VPUCM_RS18855 a6ed0697cd79defddddc7a03dbe8cb06 320 Pfam PF07724 AAA domain (Cdc48 subfamily) 230 318 1.9E-28 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS04080 1744ad7e63e0b7733cb46493101bbb7a 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 310 2.5E-83 T 22-04-2016 VPUCM_RS04080 1744ad7e63e0b7733cb46493101bbb7a 326 SUPERFAMILY SSF56784 107 310 1.93E-49 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS04080 1744ad7e63e0b7733cb46493101bbb7a 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 9.1E-29 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 VPUCM_RS04080 1744ad7e63e0b7733cb46493101bbb7a 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 5.5E-15 T 22-04-2016 VPUCM_RS04080 1744ad7e63e0b7733cb46493101bbb7a 326 PANTHER PTHR10000:SF7 60 316 2.4E-110 T 22-04-2016 VPUCM_RS04080 1744ad7e63e0b7733cb46493101bbb7a 326 Gene3D G3DSA:1.10.150.210 117 168 2.3E-28 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 VPUCM_RS04080 1744ad7e63e0b7733cb46493101bbb7a 326 Gene3D G3DSA:3.40.50.1000 169 297 1.8E-36 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS04080 1744ad7e63e0b7733cb46493101bbb7a 326 PANTHER PTHR10000 60 316 2.4E-110 T 22-04-2016 VPUCM_RS02160 b4367cbfde6eb74c78cfd6a73a0327d8 142 SUPERFAMILY SSF52161 1 140 1.24E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02160 b4367cbfde6eb74c78cfd6a73a0327d8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.9E-66 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02160 b4367cbfde6eb74c78cfd6a73a0327d8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02160 b4367cbfde6eb74c78cfd6a73a0327d8 142 PANTHER PTHR11545 1 142 1.0E-79 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02160 b4367cbfde6eb74c78cfd6a73a0327d8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02160 b4367cbfde6eb74c78cfd6a73a0327d8 142 PIRSF PIRSF002181 1 142 3.5E-53 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02160 b4367cbfde6eb74c78cfd6a73a0327d8 142 Pfam PF00572 Ribosomal protein L13 15 138 2.8E-57 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02160 b4367cbfde6eb74c78cfd6a73a0327d8 142 Gene3D G3DSA:3.90.1180.10 3 141 1.1E-65 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 PANTHER PTHR22942 3 335 3.1E-206 T 22-04-2016 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 ProSitePatterns PS00321 recA signature. 213 221 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.2E-170 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 Gene3D G3DSA:3.30.250.10 268 326 3.7E-29 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 210 238 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 165 194 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 243 272 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 127 156 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 297 314 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 93 122 2.9E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 SUPERFAMILY SSF54752 269 325 2.09E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 Gene3D G3DSA:3.40.50.300 26 267 1.5E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 5.8E-143 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.595 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 SMART SM00382 57 228 4.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 PANTHER PTHR22942:SF1 3 335 3.1E-206 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS13215 b8d60124ca077d8108425db2a35a43cc 347 SUPERFAMILY SSF52540 4 266 4.02E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 Gene3D G3DSA:1.10.287.130 217 284 2.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 287 7.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 SMART SM00388 224 289 8.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 SMART SM00387 333 423 2.6E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 420 2.2E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 PANTHER PTHR24423:SF474 161 419 8.6E-30 T 22-04-2016 VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 PANTHER PTHR24423:SF474 1 12 8.6E-30 T 22-04-2016 VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 SUPERFAMILY SSF47384 207 289 1.71E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 SUPERFAMILY SSF55874 280 419 1.2E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 PANTHER PTHR24423 161 419 8.6E-30 T 22-04-2016 VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 PANTHER PTHR24423 1 12 8.6E-30 T 22-04-2016 VPUCM_RS06235 1e87457144e5f32254fd7f5a792892d9 429 Gene3D G3DSA:3.30.565.10 303 424 2.7E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS24035 56dfc61966beecaef851c9d0831915fa 85 SUPERFAMILY SSF53850 3 82 1.99E-6 T 22-04-2016 VPUCM_RS24035 56dfc61966beecaef851c9d0831915fa 85 Gene3D G3DSA:3.40.190.10 3 67 2.8E-5 T 22-04-2016 VPUCM_RS11145 3d4795870d738d52f40e969c2a08b043 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 134 9.2E-58 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VPUCM_RS11145 3d4795870d738d52f40e969c2a08b043 136 Pfam PF01641 SelR domain 14 132 2.0E-54 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VPUCM_RS11145 3d4795870d738d52f40e969c2a08b043 136 Gene3D G3DSA:2.170.150.20 5 135 4.1E-62 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VPUCM_RS11145 3d4795870d738d52f40e969c2a08b043 136 PANTHER PTHR10173 6 136 2.5E-61 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VPUCM_RS11145 3d4795870d738d52f40e969c2a08b043 136 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 37.616 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VPUCM_RS11145 3d4795870d738d52f40e969c2a08b043 136 PANTHER PTHR10173:SF18 6 136 2.5E-61 T 22-04-2016 VPUCM_RS11145 3d4795870d738d52f40e969c2a08b043 136 SUPERFAMILY SSF51316 8 135 3.03E-59 T 22-04-2016 IPR011057 Mss4-like VPUCM_RS06810 2c8e3f668cdb236310446f8ab78d636c 177 PANTHER PTHR11080 1 160 2.3E-32 T 22-04-2016 VPUCM_RS06810 2c8e3f668cdb236310446f8ab78d636c 177 SUPERFAMILY SSF52499 2 168 1.7E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS06810 2c8e3f668cdb236310446f8ab78d636c 177 Gene3D G3DSA:3.40.50.850 1 168 2.0E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS06810 2c8e3f668cdb236310446f8ab78d636c 177 Pfam PF00857 Isochorismatase family 3 147 5.6E-33 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS06810 2c8e3f668cdb236310446f8ab78d636c 177 PANTHER PTHR11080:SF13 1 160 2.3E-32 T 22-04-2016 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88946 115 453 1.57E-95 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.10.10 459 510 1.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04545 Sigma-70, region 4 554 607 1.5E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 45.744 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04546 Sigma-70, non-essential region 139 355 5.4E-67 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.10.10 551 619 5.7E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 2.5E-28 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.1E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PANTHER PTHR30603 333 619 7.9E-250 T 22-04-2016 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PANTHER PTHR30603 1 152 7.9E-250 T 22-04-2016 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 6.0E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PANTHER PTHR30603:SF0 333 619 7.9E-250 T 22-04-2016 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 PANTHER PTHR30603:SF0 1 152 7.9E-250 T 22-04-2016 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.2E-120 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88659 516 618 9.38E-26 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS02000 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.601.10 112 455 7.8E-133 T 22-04-2016 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 Gene3D G3DSA:3.30.930.10 151 500 4.4E-120 T 22-04-2016 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 SUPERFAMILY SSF50249 12 149 1.69E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 2.4E-200 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 Gene3D G3DSA:2.40.50.140 14 148 4.3E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 3.7E-80 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 SUPERFAMILY SSF55681 156 502 1.82E-118 T 22-04-2016 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.154 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 PANTHER PTHR22594 3 504 2.4E-262 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 PANTHER PTHR22594:SF4 3 504 2.4E-262 T 22-04-2016 VPUCM_RS02525 ec4dc797f2c0b7b3fef3241bbcd03e8d 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 2.1E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VPUCM_RS09940 089d5a1c028ce473885c8c4a273b9285 400 PANTHER PTHR23502 15 391 4.4E-184 T 22-04-2016 VPUCM_RS09940 089d5a1c028ce473885c8c4a273b9285 400 SUPERFAMILY SSF103473 8 398 4.71E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS09940 089d5a1c028ce473885c8c4a273b9285 400 PANTHER PTHR23502:SF39 15 391 4.4E-184 T 22-04-2016 VPUCM_RS09940 089d5a1c028ce473885c8c4a273b9285 400 Gene3D G3DSA:1.20.1250.20 223 397 5.0E-8 T 22-04-2016 VPUCM_RS09940 089d5a1c028ce473885c8c4a273b9285 400 Gene3D G3DSA:1.20.1250.20 19 201 5.6E-32 T 22-04-2016 VPUCM_RS09940 089d5a1c028ce473885c8c4a273b9285 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 4.1E-120 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VPUCM_RS09940 089d5a1c028ce473885c8c4a273b9285 400 Pfam PF07690 Major Facilitator Superfamily 24 364 5.6E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 Hamap MF_00318 Enolase [eno]. 2 417 44.504 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 Gene3D G3DSA:3.30.390.10 3 127 1.1E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 165 178 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 107 123 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 369 386 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 317 328 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 37 51 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 340 354 4.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.2E-207 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 Gene3D G3DSA:3.20.20.120 128 429 2.1E-135 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 SUPERFAMILY SSF54826 3 138 4.52E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 Pfam PF03952 Enolase, N-terminal domain 4 134 3.9E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 PANTHER PTHR11902 1 428 6.6E-273 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 PIRSF PIRSF001400 1 431 4.2E-192 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 SUPERFAMILY SSF51604 143 428 8.06E-127 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.2E-137 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 SMART SM01192 143 431 6.4E-214 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS13270 b91cc1658d562689e07dda0346698ee9 433 SMART SM01193 4 134 1.6E-92 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS14830 651fad5bf6ba04f07a48b53eafbff7ba 144 PANTHER PTHR12231 1 144 1.4E-43 T 22-04-2016 VPUCM_RS14830 651fad5bf6ba04f07a48b53eafbff7ba 144 SMART SM00450 40 138 1.6E-20 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS14830 651fad5bf6ba04f07a48b53eafbff7ba 144 Gene3D G3DSA:3.40.250.10 22 143 2.9E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS14830 651fad5bf6ba04f07a48b53eafbff7ba 144 SUPERFAMILY SSF52821 15 143 2.1E-30 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS14830 651fad5bf6ba04f07a48b53eafbff7ba 144 Pfam PF00581 Rhodanese-like domain 44 135 6.6E-17 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS14830 651fad5bf6ba04f07a48b53eafbff7ba 144 PANTHER PTHR12231:SF138 1 144 1.4E-43 T 22-04-2016 VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 2.3E-192 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 Gene3D G3DSA:3.40.50.300 460 633 2.1E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 Gene3D G3DSA:3.40.50.300 198 382 9.2E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 SUPERFAMILY SSF52540 71 123 1.07E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 SUPERFAMILY SSF52540 150 380 1.07E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 SMART SM00490 493 590 4.0E-13 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 Pfam PF00270 DEAD/DEAH box helicase 219 364 2.1E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 SUPERFAMILY SSF52540 462 632 2.99E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 Pfam PF00271 Helicase conserved C-terminal domain 501 589 3.9E-8 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 PANTHER PTHR30580 1 734 9.9E-283 T 22-04-2016 VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 SMART SM00487 197 396 9.1E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS01415 dc294ec7f0f3ee5bc6302116e3f9911b 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.386 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PANTHER PTHR22912:SF93 1 461 3.7E-279 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 SUPERFAMILY SSF51905 5 319 4.94E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 Gene3D G3DSA:3.50.50.60 271 339 1.2E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 Gene3D G3DSA:3.50.50.60 6 141 1.2E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 2.0E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PANTHER PTHR22912 1 461 3.7E-279 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.724 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 SUPERFAMILY SSF55424 345 463 1.89E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.6E-52 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 4.9E-28 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 4.9E-28 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 4.9E-28 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.9E-28 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 4.9E-28 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 PIRSF PIRSF000350 2 463 1.0E-69 T 22-04-2016 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 Gene3D G3DSA:3.50.50.60 142 270 4.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 Gene3D G3DSA:3.30.390.30 344 460 1.4E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VPUCM_RS15370 1ef09be69e9a62ebb7aa93af2fd409a4 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 2.5E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 PANTHER PTHR22617:SF6 1 152 4.4E-270 T 22-04-2016 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 PANTHER PTHR22617:SF6 187 737 4.4E-270 T 22-04-2016 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 9.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 9.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 9.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Gene3D G3DSA:3.30.565.10 417 601 6.6E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 601 2.4E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 SMART SM00073 6 103 3.3E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 SMART SM01231 354 414 3.2E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 SUPERFAMILY SSF50341 601 735 2.88E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Gene3D G3DSA:1.20.120.160 4 141 1.8E-42 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Gene3D G3DSA:1.10.287.560 355 415 1.9E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Gene3D G3DSA:2.40.50.180 626 690 8.4E-12 T 22-04-2016 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Pfam PF01584 CheW-like domain 608 737 1.8E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 PANTHER PTHR22617 1 152 4.4E-270 T 22-04-2016 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 PANTHER PTHR22617 187 737 4.4E-270 T 22-04-2016 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 355 414 5.1E-12 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 SMART SM00260 594 735 4.6E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 SUPERFAMILY SSF55874 417 600 5.11E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 SMART SM00387 459 602 1.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 SUPERFAMILY SSF47384 356 415 7.45E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 SUPERFAMILY SSF47226 6 129 3.53E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Gene3D G3DSA:2.30.30.40 691 735 1.6E-21 T 22-04-2016 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Gene3D G3DSA:2.30.30.40 602 623 1.6E-21 T 22-04-2016 VPUCM_RS11500 c3a024483f0588dea4dfc7bff46e1d1c 744 Pfam PF01627 Hpt domain 8 100 6.5E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.3E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.357 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 Gene3D G3DSA:3.40.190.10 112 200 3.3E-40 T 22-04-2016 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 SUPERFAMILY SSF54782 221 310 5.89E-28 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 Gene3D G3DSA:3.30.160.40 222 306 1.7E-26 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 SUPERFAMILY SSF53850 6 220 6.4E-86 T 22-04-2016 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 3.8E-20 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 Gene3D G3DSA:3.40.190.10 4 111 2.0E-49 T 22-04-2016 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.1E-115 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.2E-79 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 PANTHER PTHR11557 7 312 8.6E-166 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15595 89f61d00567aacfad457baf0c05e06fb 312 PIRSF PIRSF001438 1 312 1.4E-122 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS06510 add951298493e9b0c7185116dae4c5e2 200 PANTHER PTHR35038 8 187 5.6E-19 T 22-04-2016 VPUCM_RS06510 add951298493e9b0c7185116dae4c5e2 200 Pfam PF13435 Cytochrome c554 and c-prime 84 160 2.6E-4 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VPUCM_RS06510 add951298493e9b0c7185116dae4c5e2 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 4.8E-63 T 22-04-2016 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 UniPathway: UPA00045 VPUCM_RS06510 add951298493e9b0c7185116dae4c5e2 200 Gene3D G3DSA:1.10.3820.10 14 191 4.3E-16 T 22-04-2016 VPUCM_RS06510 add951298493e9b0c7185116dae4c5e2 200 SUPERFAMILY SSF48695 5 190 2.62E-26 T 22-04-2016 IPR011031 Multihaem cytochrome VPUCM_RS03410 8f03d3599fe349cb69069d3cf3f64f88 151 Pfam PF02576 Putative ribosome maturation factor RimP 12 147 2.9E-49 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VPUCM_RS03410 8f03d3599fe349cb69069d3cf3f64f88 151 PANTHER PTHR33867:SF1 1 151 3.3E-59 T 22-04-2016 VPUCM_RS03410 8f03d3599fe349cb69069d3cf3f64f88 151 Gene3D G3DSA:3.30.300.70 2 80 2.9E-33 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VPUCM_RS03410 8f03d3599fe349cb69069d3cf3f64f88 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.688 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VPUCM_RS03410 8f03d3599fe349cb69069d3cf3f64f88 151 SUPERFAMILY SSF75420 2 83 2.62E-26 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VPUCM_RS03410 8f03d3599fe349cb69069d3cf3f64f88 151 PANTHER PTHR33867 1 151 3.3E-59 T 22-04-2016 VPUCM_RS03410 8f03d3599fe349cb69069d3cf3f64f88 151 Gene3D G3DSA:2.30.30.180 88 148 5.4E-14 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VPUCM_RS03410 8f03d3599fe349cb69069d3cf3f64f88 151 SUPERFAMILY SSF74942 84 151 1.02E-17 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.911 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.7E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF116878 120 219 1.09E-52 T 22-04-2016 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF116878 378 453 1.09E-52 T 22-04-2016 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 3.4E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 PANTHER PTHR11649 7 453 1.2E-171 T 22-04-2016 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:3.40.50.300 285 375 1.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.8E-35 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:3.30.1360.120 2 120 1.2E-42 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 5.1E-101 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:1.20.120.430 246 270 3.1E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:1.20.120.430 121 181 3.1E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:1.20.120.430 383 453 3.1E-60 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 PANTHER PTHR11649:SF56 7 453 1.2E-171 T 22-04-2016 VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF52540 203 371 5.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF52540 70 169 5.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:3.40.50.300 193 245 5.7E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00010 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF12631 MnmE helical domain 122 450 2.0E-61 T 22-04-2016 IPR025867 MnmE, helical domain VPUCM_RS04595 a8773241d069147ad6132a78619df7b7 168 Pfam PF13302 Acetyltransferase (GNAT) domain 30 139 1.3E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS04595 a8773241d069147ad6132a78619df7b7 168 Gene3D G3DSA:3.40.630.30 3 151 2.3E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS04595 a8773241d069147ad6132a78619df7b7 168 PANTHER PTHR13256:SF10 1 146 1.4E-26 T 22-04-2016 VPUCM_RS04595 a8773241d069147ad6132a78619df7b7 168 SUPERFAMILY SSF55729 3 146 4.37E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS04595 a8773241d069147ad6132a78619df7b7 168 PANTHER PTHR13256 1 146 1.4E-26 T 22-04-2016 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 SUPERFAMILY SSF56672 3 238 6.23E-73 T 22-04-2016 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 Pfam PF00817 impB/mucB/samB family 7 152 6.9E-37 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 Pfam PF13438 Domain of unknown function (DUF4113) 372 421 2.2E-22 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 Pfam PF11798 IMS family HHH motif 170 201 4.4E-6 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 352 3.8E-11 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 SUPERFAMILY SSF100879 245 348 6.87E-7 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 Gene3D G3DSA:3.30.1490.100 246 352 3.2E-6 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 PANTHER PTHR11076:SF40 1 383 6.1E-182 T 22-04-2016 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 PANTHER PTHR11076 1 383 6.1E-182 T 22-04-2016 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 Gene3D G3DSA:1.10.150.20 169 241 6.3E-22 T 22-04-2016 VPUCM_RS03525 27a054cb35a98990f1f611e5aa14fa88 422 Gene3D G3DSA:3.30.70.270 71 158 2.5E-24 T 22-04-2016 VPUCM_RS08750 a773b7f8f90ebd1297c22c0ca90e1394 152 Pfam PF05932 Tir chaperone protein (CesT) family 7 126 6.3E-27 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VPUCM_RS08750 a773b7f8f90ebd1297c22c0ca90e1394 152 SUPERFAMILY SSF69635 1 147 1.81E-34 T 22-04-2016 VPUCM_RS08750 a773b7f8f90ebd1297c22c0ca90e1394 152 Gene3D G3DSA:3.30.1460.10 1 130 7.9E-10 T 22-04-2016 VPUCM_RS04640 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.005 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VPUCM_RS04640 ebbd96ee4e09ea22ef717643c4e1ef4b 243 SUPERFAMILY SSF53633 7 239 6.55E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS04640 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Pfam PF00696 Amino acid kinase family 11 219 6.1E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS04640 ebbd96ee4e09ea22ef717643c4e1ef4b 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.4E-102 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VPUCM_RS04640 ebbd96ee4e09ea22ef717643c4e1ef4b 243 PIRSF PIRSF005650 4 243 5.6E-89 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VPUCM_RS04640 ebbd96ee4e09ea22ef717643c4e1ef4b 243 PANTHER PTHR21499 4 239 1.0E-112 T 22-04-2016 VPUCM_RS04640 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Gene3D G3DSA:3.40.1160.10 2 240 2.0E-87 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS04640 ebbd96ee4e09ea22ef717643c4e1ef4b 243 PANTHER PTHR21499:SF23 4 239 1.0E-112 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 PANTHER PTHR30349:SF28 9 180 5.8E-118 T 22-04-2016 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 PANTHER PTHR30349:SF28 199 308 5.8E-118 T 22-04-2016 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 SUPERFAMILY SSF56349 99 185 1.65E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 SUPERFAMILY SSF56349 214 315 1.65E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 Pfam PF00589 Phage integrase family 105 305 1.0E-43 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 PANTHER PTHR30349 9 180 5.8E-118 T 22-04-2016 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 PANTHER PTHR30349 199 308 5.8E-118 T 22-04-2016 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 Gene3D G3DSA:1.10.443.10 105 307 1.1E-47 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 Gene3D G3DSA:1.10.150.130 14 84 9.1E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 6.4E-157 T 22-04-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VPUCM_RS06770 0bdfe292a5e06c18f15f47641d021524 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 8.4E-24 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VPUCM_RS13260 60217fdc2264e9290ccab0b0507b177f 234 Gene3D G3DSA:3.90.550.10 9 232 5.4E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS13260 60217fdc2264e9290ccab0b0507b177f 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 9.3E-78 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS13260 60217fdc2264e9290ccab0b0507b177f 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS13260 60217fdc2264e9290ccab0b0507b177f 234 PANTHER PTHR32125:SF4 9 233 2.6E-84 T 22-04-2016 VPUCM_RS13260 60217fdc2264e9290ccab0b0507b177f 234 PANTHER PTHR32125 9 233 2.6E-84 T 22-04-2016 VPUCM_RS13260 60217fdc2264e9290ccab0b0507b177f 234 SUPERFAMILY SSF53448 9 230 1.75E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS13260 60217fdc2264e9290ccab0b0507b177f 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 229 2.3E-78 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS13260 60217fdc2264e9290ccab0b0507b177f 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 232 32.475 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS09680 bcb73cafb185092c92bad295731091ed 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 9.9E-118 T 22-04-2016 IPR024513 Protein of unknown function DUF3334 VPUCM_RS09680 bcb73cafb185092c92bad295731091ed 226 SUPERFAMILY SSF103039 10 173 3.27E-24 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS09680 bcb73cafb185092c92bad295731091ed 226 Gene3D G3DSA:3.40.1550.10 17 173 3.2E-14 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS00250 9e18de1e086904ade4d94cca79c3dd0a 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 203 5.4E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS00250 9e18de1e086904ade4d94cca79c3dd0a 241 SUPERFAMILY SSF56784 3 237 1.49E-42 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS00250 9e18de1e086904ade4d94cca79c3dd0a 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 209 8.5E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS00250 9e18de1e086904ade4d94cca79c3dd0a 241 Gene3D G3DSA:3.40.50.1000 3 232 3.5E-39 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS00250 9e18de1e086904ade4d94cca79c3dd0a 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 1.9E-22 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS00250 9e18de1e086904ade4d94cca79c3dd0a 241 PANTHER PTHR12725:SF57 2 239 1.6E-44 T 22-04-2016 VPUCM_RS00250 9e18de1e086904ade4d94cca79c3dd0a 241 PANTHER PTHR12725 2 239 1.6E-44 T 22-04-2016 VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 PANTHER PTHR24567:SF27 1 207 3.8E-154 T 22-04-2016 VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 PANTHER PTHR24567 1 207 3.8E-154 T 22-04-2016 VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 6 143 8.8E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.8E-23 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.6E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS14590 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 SUPERFAMILY SSF53448 1 249 9.46E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 8.9E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 2.9E-4 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.6E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 SUPERFAMILY SSF51161 252 434 1.14E-51 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.635 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 PANTHER PTHR22572 4 446 8.4E-226 T 22-04-2016 VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 2.3E-205 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 Pfam PF12804 MobA-like NTP transferase domain 5 121 3.1E-22 T 22-04-2016 IPR025877 MobA-like NTP transferase VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 Gene3D G3DSA:3.90.550.10 1 243 6.7E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 Gene3D G3DSA:2.160.10.10 244 321 7.8E-20 T 22-04-2016 VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 PANTHER PTHR22572:SF115 4 446 8.4E-226 T 22-04-2016 VPUCM_RS16000 6b3e44d2ba94853f7bf9fa219951c80f 453 Gene3D G3DSA:2.160.10.10 322 451 6.7E-35 T 22-04-2016 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 Gene3D G3DSA:3.30.565.10 501 668 1.3E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 668 1.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 Pfam PF00672 HAMP domain 326 395 1.1E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 SMART SM00387 558 669 1.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 SUPERFAMILY SSF103190 178 310 1.2E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 SUPERFAMILY SSF47384 442 512 8.63E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 Gene3D G3DSA:1.10.287.130 443 500 3.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PANTHER PTHR24423:SF532 21 283 3.1E-186 T 22-04-2016 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PANTHER PTHR24423:SF532 444 666 3.1E-186 T 22-04-2016 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PANTHER PTHR24423:SF532 339 395 3.1E-186 T 22-04-2016 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 SUPERFAMILY SSF55874 505 667 1.23E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 666 1.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 1.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 1.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 1.6E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 SMART SM00388 448 515 4.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 513 3.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 Pfam PF17202 Single cache domain 3 204 318 4.7E-28 T 22-04-2016 IPR033463 Single cache domain 3 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PANTHER PTHR24423 21 283 3.1E-186 T 22-04-2016 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PANTHER PTHR24423 444 666 3.1E-186 T 22-04-2016 VPUCM_RS07940 9847cf6be2f2b16eaa773578c1f4da7d 679 PANTHER PTHR24423 339 395 3.1E-186 T 22-04-2016 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 PANTHER PTHR24220:SF402 264 334 1.5E-161 T 22-04-2016 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 PANTHER PTHR24220:SF402 10 246 1.5E-161 T 22-04-2016 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 PANTHER PTHR24220 264 334 1.5E-161 T 22-04-2016 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 PANTHER PTHR24220 10 246 1.5E-161 T 22-04-2016 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 Gene3D G3DSA:2.40.50.100 336 341 0.001 T 22-04-2016 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 Gene3D G3DSA:2.40.50.100 244 289 0.001 T 22-04-2016 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 SMART SM00382 34 217 1.8E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 SUPERFAMILY SSF50331 242 361 1.89E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 358 2.1E-116 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 SUPERFAMILY SSF52540 9 246 1.27E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 Pfam PF08402 TOBE domain 283 361 1.1E-15 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 Gene3D G3DSA:3.40.50.300 6 241 1.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09380 23b6aef1253e61cfd6beb4a5d96c8baf 373 Pfam PF00005 ABC transporter 26 167 8.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 SMART SM00487 25 221 7.1E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 PANTHER PTHR13710:SF81 17 610 3.5E-298 T 22-04-2016 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 SMART SM00341 533 611 2.1E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Gene3D G3DSA:1.10.10.10 348 517 2.6E-63 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 SMART SM00956 414 517 8.9E-51 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Pfam PF00270 DEAD/DEAH box helicase 31 188 1.5E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 SUPERFAMILY SSF52540 17 204 2.08E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Gene3D G3DSA:3.40.50.300 18 205 5.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Gene3D G3DSA:3.40.50.300 210 347 6.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Pfam PF09382 RQC domain 409 517 6.0E-37 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 9.5E-190 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Gene3D G3DSA:1.10.150.80 534 606 6.1E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.8E-253 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 PANTHER PTHR13710 17 610 3.5E-298 T 22-04-2016 VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 SUPERFAMILY SSF52540 211 459 1.36E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Pfam PF00271 Helicase conserved C-terminal domain 228 334 1.1E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 SMART SM00490 253 334 9.3E-29 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS15680 73bd1e7db35e1befa66712582837c227 611 Pfam PF16124 RecQ zinc-binding 346 407 2.8E-18 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 Gene3D G3DSA:3.40.50.300 61 279 8.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 SMART SM00382 93 246 5.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.6E-9 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF52540 70 294 2.66E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.2E-225 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 PANTHER PTHR32472 1 455 1.6E-225 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 Pfam PF13481 AAA domain 73 224 1.8E-13 T 22-04-2016 VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF54211 305 456 4.17E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF54211 257 271 4.17E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS04090 c0b05929f5d38700ef3c4aff5498310b 459 Gene3D G3DSA:3.30.230.10 286 456 1.7E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 Gene3D G3DSA:3.40.50.170 4 208 1.7E-75 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 SUPERFAMILY SSF50486 208 310 4.32E-33 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 9.3E-109 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.3E-29 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 Pfam PF00551 Formyl transferase 6 182 1.6E-47 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.98 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 PANTHER PTHR11138 5 305 1.7E-118 T 22-04-2016 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 SUPERFAMILY SSF53328 5 210 1.19E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS15885 d56a92e37ef0e634971c252b5164ff4c 315 Gene3D G3DSA:3.10.25.10 210 307 1.1E-35 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PANTHER PTHR11958 1 407 4.5E-282 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 1.4E-119 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 7.39E-53 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 SUPERFAMILY SSF118215 15 403 7.98E-110 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 PANTHER PTHR11958:SF54 1 407 4.5E-282 T 22-04-2016 VPUCM_RS06315 474648488c25e6b0382a9cec95433c1e 419 Gene3D G3DSA:1.10.3860.10 6 408 1.1E-113 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PANTHER PTHR24322 151 183 1.4E-75 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PANTHER PTHR24322 10 135 1.4E-75 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 6.0E-5 T 22-04-2016 VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 SUPERFAMILY SSF51735 4 243 3.71E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PANTHER PTHR24322:SF635 151 183 1.4E-75 T 22-04-2016 VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PANTHER PTHR24322:SF635 10 135 1.4E-75 T 22-04-2016 VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 3.3E-67 T 22-04-2016 VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 Gene3D G3DSA:3.40.50.720 1 243 3.3E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 5.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.9E-100 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 8.4E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10565 ebe33cdec3bcbe468c1f490770a5a6ac 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 SUPERFAMILY SSF109604 351 490 4.87E-12 T 22-04-2016 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 Pfam PF05746 DALR anticodon binding domain 580 677 3.0E-10 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 PANTHER PTHR30075 1 688 0.0 T 22-04-2016 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.983 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 1.2E-205 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.0E-296 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00090 d239945fda36124156b039ad67efb010 688 Gene3D G3DSA:1.10.730.10 582 676 5.3E-7 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 SMART SM00487 20 221 6.2E-59 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 PANTHER PTHR24031 1 399 1.5E-250 T 22-04-2016 VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 PANTHER PTHR24031:SF273 1 399 1.5E-250 T 22-04-2016 VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 Pfam PF00271 Helicase conserved C-terminal domain 233 338 2.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 SMART SM00490 257 338 1.4E-30 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 Gene3D G3DSA:3.40.50.300 2 217 4.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 Pfam PF00270 DEAD/DEAH box helicase 25 194 3.9E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 SUPERFAMILY SSF52540 74 359 6.56E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05055 53053c3deaa1020cf35cc4314a923fb3 411 Gene3D G3DSA:3.40.50.300 218 372 4.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 Gene3D G3DSA:3.90.25.10 199 356 2.7E-51 T 22-04-2016 VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 PANTHER PTHR10366 5 281 5.1E-163 T 22-04-2016 VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 PANTHER PTHR10366 305 358 5.1E-163 T 22-04-2016 VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 SUPERFAMILY SSF51735 1 356 2.67E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 PANTHER PTHR10366:SF437 5 281 5.1E-163 T 22-04-2016 VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 PANTHER PTHR10366:SF437 305 358 5.1E-163 T 22-04-2016 VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 Gene3D G3DSA:3.40.50.720 2 198 7.8E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 344 1.9E-95 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01245 f0e00ee62df3729c3df9e3eff72301e1 359 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 358 3.3E-151 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VPUCM_RS08470 66362b991488fac257a7cc095e1fa296 109 SUPERFAMILY SSF69721 2 109 6.67E-41 T 22-04-2016 IPR025526 DsrC-like domain VPUCM_RS08470 66362b991488fac257a7cc095e1fa296 109 PIRSF PIRSF006223 2 109 3.0E-40 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VPUCM_RS08470 66362b991488fac257a7cc095e1fa296 109 PANTHER PTHR37010:SF1 1 109 5.2E-57 T 22-04-2016 VPUCM_RS08470 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:1.10.10.370 40 109 6.4E-36 T 22-04-2016 VPUCM_RS08470 66362b991488fac257a7cc095e1fa296 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.6E-49 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VPUCM_RS08470 66362b991488fac257a7cc095e1fa296 109 PANTHER PTHR37010 1 109 5.2E-57 T 22-04-2016 VPUCM_RS08470 66362b991488fac257a7cc095e1fa296 109 Pfam PF04358 DsrC like protein 4 109 1.1E-43 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VPUCM_RS08470 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:3.30.1420.10 3 39 2.9E-12 T 22-04-2016 VPUCM_RS03260 9dce24472e8e5f0c01a8fce0924b1478 147 PANTHER PTHR12901:SF7 1 142 2.7E-65 T 22-04-2016 VPUCM_RS03260 9dce24472e8e5f0c01a8fce0924b1478 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 6.3E-31 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain VPUCM_RS03260 9dce24472e8e5f0c01a8fce0924b1478 147 SUPERFAMILY SSF55961 1 143 6.14E-34 T 22-04-2016 VPUCM_RS03260 9dce24472e8e5f0c01a8fce0924b1478 147 PANTHER PTHR12901 1 142 2.7E-65 T 22-04-2016 VPUCM_RS03260 9dce24472e8e5f0c01a8fce0924b1478 147 Gene3D G3DSA:3.30.530.20 1 142 1.1E-46 T 22-04-2016 IPR023393 START-like domain VPUCM_RS09445 3809d8dbb8d694f41407167e0360728a 76 Pfam PF00462 Glutaredoxin 4 60 5.8E-12 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VPUCM_RS09445 3809d8dbb8d694f41407167e0360728a 76 Gene3D G3DSA:3.40.30.10 3 74 1.5E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS09445 3809d8dbb8d694f41407167e0360728a 76 SUPERFAMILY SSF52833 3 68 6.2E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS09445 3809d8dbb8d694f41407167e0360728a 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VPUCM_RS09445 3809d8dbb8d694f41407167e0360728a 76 PANTHER PTHR34386 1 74 2.8E-19 T 22-04-2016 VPUCM_RS09445 3809d8dbb8d694f41407167e0360728a 76 PANTHER PTHR34386:SF1 1 74 2.8E-19 T 22-04-2016 VPUCM_RS06145 800eb79f896af34b74ba82716eeec3a4 245 SUPERFAMILY SSF51366 2 242 3.43E-63 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VPUCM_RS06145 800eb79f896af34b74ba82716eeec3a4 245 PANTHER PTHR21235 2 245 4.9E-110 T 22-04-2016 VPUCM_RS06145 800eb79f896af34b74ba82716eeec3a4 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.516 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VPUCM_RS06145 800eb79f896af34b74ba82716eeec3a4 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 9.7E-78 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VPUCM_RS06145 800eb79f896af34b74ba82716eeec3a4 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.7E-75 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VPUCM_RS06145 800eb79f896af34b74ba82716eeec3a4 245 Gene3D G3DSA:3.20.20.70 2 242 5.1E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS06145 800eb79f896af34b74ba82716eeec3a4 245 PANTHER PTHR21235:SF15 2 245 4.9E-110 T 22-04-2016 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 SUPERFAMILY SSF54211 594 769 2.2E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.035 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 Gene3D G3DSA:3.40.50.300 310 499 3.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 SMART SM00464 10 201 1.4E-76 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 5.3E-41 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 4.0E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 Gene3D G3DSA:1.10.8.60 500 583 3.2E-33 T 22-04-2016 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 PANTHER PTHR10046:SF43 8 775 0.0 T 22-04-2016 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 3.0E-100 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 SUPERFAMILY SSF88697 10 200 1.74E-48 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 PANTHER PTHR10046 8 775 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.3E-56 T 22-04-2016 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.3E-56 T 22-04-2016 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.3E-56 T 22-04-2016 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.3E-56 T 22-04-2016 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.3E-56 T 22-04-2016 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 PIRSF PIRSF001174 1 774 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 SUPERFAMILY SSF52540 312 586 1.83E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 SMART SM00382 347 491 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VPUCM_RS05135 6f7438dbbef2c6e2ac1c0462b72767a6 783 Gene3D G3DSA:3.30.230.10 589 770 1.2E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS20710 b0141c382559568744bb4d21da501d05 204 Pfam PF09317 Domain of unknown function (DUF1974) 124 204 2.1E-31 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VPUCM_RS20710 b0141c382559568744bb4d21da501d05 204 SUPERFAMILY SSF47203 3 123 4.03E-18 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VPUCM_RS20710 b0141c382559568744bb4d21da501d05 204 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 4 117 2.4E-10 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VPUCM_RS20710 b0141c382559568744bb4d21da501d05 204 PANTHER PTHR10909 1 141 1.1E-75 T 22-04-2016 VPUCM_RS20710 b0141c382559568744bb4d21da501d05 204 PANTHER PTHR10909:SF321 1 141 1.1E-75 T 22-04-2016 VPUCM_RS20710 b0141c382559568744bb4d21da501d05 204 Gene3D G3DSA:1.20.140.10 3 117 5.5E-16 T 22-04-2016 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 Gene3D G3DSA:3.30.2060.10 92 181 3.0E-29 T 22-04-2016 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 SUPERFAMILY SSF53955 190 383 5.91E-69 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 Gene3D G3DSA:1.10.3810.10 187 363 6.4E-68 T 22-04-2016 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 Pfam PF00912 Transglycosylase 190 360 1.5E-59 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 PIRSF PIRSF002799 14 790 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 453 692 3.0E-23 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 Gene3D G3DSA:3.40.710.10 364 776 5.6E-108 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 49 772 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 PANTHER PTHR32282:SF11 177 741 1.2E-260 T 22-04-2016 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 Pfam PF14814 Bifunctional transglycosylase second domain 94 178 5.0E-27 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 SUPERFAMILY SSF56601 343 365 7.14E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 SUPERFAMILY SSF56601 393 777 7.14E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 PANTHER PTHR32282 177 741 1.2E-260 T 22-04-2016 VPUCM_RS12920 d65274dbb5d909047d6c2d67ca570250 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 194 727 2.4E-157 T 22-04-2016 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 2.9E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PIRSF PIRSF001535 1 571 6.7E-265 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 Pfam PF03129 Anticodon binding domain 475 568 1.2E-21 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PANTHER PTHR11451 4 244 2.4E-148 T 22-04-2016 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PANTHER PTHR11451 399 571 2.4E-148 T 22-04-2016 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.90.960.10 251 388 3.6E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.016 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF52954 463 570 3.32E-33 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF55826 218 390 6.8E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.40.50.800 472 571 1.5E-34 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF55681 407 478 1.24E-96 T 22-04-2016 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF55681 10 237 1.24E-96 T 22-04-2016 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 4.8E-39 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PANTHER PTHR11451:SF3 4 244 2.4E-148 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 PANTHER PTHR11451:SF3 399 571 2.4E-148 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.30.930.10 389 471 3.1E-100 T 22-04-2016 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.30.930.10 10 234 3.1E-100 T 22-04-2016 VPUCM_RS04565 336cd22801a341936643ce88148778f6 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.4E-245 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 PIRSF PIRSF000456 4 262 1.0E-95 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.8E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 3.4E-5 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 5.1E-95 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Gene3D G3DSA:1.20.1180.10 209 262 1.2E-23 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 PANTHER PTHR23416:SF8 1 254 9.9E-118 T 22-04-2016 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.67 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Gene3D G3DSA:2.160.10.10 94 208 3.2E-24 T 22-04-2016 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 SUPERFAMILY SSF51161 1 262 5.99E-74 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 PANTHER PTHR23416 1 254 9.9E-118 T 22-04-2016 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.7E-25 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VPUCM_RS04690 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Gene3D G3DSA:2.160.10.10 2 93 5.2E-22 T 22-04-2016 VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 Gene3D G3DSA:3.40.50.150 92 280 2.8E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 46.315 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 PANTHER PTHR18895 8 280 3.1E-112 T 22-04-2016 VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 PANTHER PTHR18895:SF64 8 280 3.1E-112 T 22-04-2016 VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 Pfam PF13847 Methyltransferase domain 117 247 1.1E-18 T 22-04-2016 IPR025714 Methyltransferase domain VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 5.1E-94 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 SUPERFAMILY SSF53335 7 279 6.31E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 283 2.2E-81 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VPUCM_RS12290 a0984bdc58f3bf2d34106f736c6b06b3 285 Gene3D G3DSA:1.10.8.10 6 90 1.6E-32 T 22-04-2016 VPUCM_RS09830 1e4d608501fa60b2358b6a94ffe8046a 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 4.0E-79 T 22-04-2016 IPR005642 Lysine exporter LysO VPUCM_RS09830 1e4d608501fa60b2358b6a94ffe8046a 301 Pfam PF03956 Membrane protein of unknown function (DUF340) 112 297 3.5E-52 T 22-04-2016 IPR005642 Lysine exporter LysO VPUCM_RS09830 1e4d608501fa60b2358b6a94ffe8046a 301 PANTHER PTHR35804 2 301 1.3E-85 T 22-04-2016 VPUCM_RS09830 1e4d608501fa60b2358b6a94ffe8046a 301 PANTHER PTHR35804:SF1 2 301 1.3E-85 T 22-04-2016 VPUCM_RS07960 083d0727a314d04cc58284095b3d9070 154 Pfam PF11749 Protein of unknown function (DUF3305) 58 144 2.5E-19 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 SUPERFAMILY SSF51971 126 285 3.06E-38 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 SUPERFAMILY SSF51971 10 78 3.06E-38 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 SUPERFAMILY SSF51971 346 405 3.06E-38 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 PANTHER PTHR13847:SF216 115 417 1.2E-45 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 PANTHER PTHR13847:SF216 12 68 1.2E-45 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 Gene3D G3DSA:3.30.9.10 144 196 9.1E-5 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 Gene3D G3DSA:3.30.9.10 272 313 9.1E-5 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 Pfam PF01266 FAD dependent oxidoreductase 12 399 1.1E-49 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 Gene3D G3DSA:3.50.50.60 197 271 1.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 Gene3D G3DSA:3.50.50.60 10 66 1.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 Gene3D G3DSA:3.50.50.60 116 138 1.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 Gene3D G3DSA:3.50.50.60 361 417 1.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 PANTHER PTHR13847 115 417 1.2E-45 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 PANTHER PTHR13847 12 68 1.2E-45 T 22-04-2016 VPUCM_RS09400 0850aca21e8b09a84992d4ca7baaaba6 418 SUPERFAMILY SSF54373 273 360 3.01E-9 T 22-04-2016 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 Gene3D G3DSA:3.20.70.20 398 559 1.2E-42 T 22-04-2016 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 Gene3D G3DSA:3.20.70.20 610 702 1.2E-42 T 22-04-2016 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 Gene3D G3DSA:3.20.70.20 130 344 1.2E-42 T 22-04-2016 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 665 1.3E-113 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 4.9E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.6E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 Pfam PF03477 ATP cone domain 6 92 2.1E-18 T 22-04-2016 IPR005144 ATP-cone domain VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 SUPERFAMILY SSF51998 222 738 5.8E-164 T 22-04-2016 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 SUPERFAMILY SSF48168 10 221 2.49E-74 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 PANTHER PTHR11573 6 752 0.0 T 22-04-2016 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 PANTHER PTHR11573:SF17 6 752 0.0 T 22-04-2016 VPUCM_RS06480 a03e55a87b54f44df3e175b80440f467 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.4E-175 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 Gene3D G3DSA:3.30.565.10 523 684 8.4E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 1.1E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 SMART SM00388 461 530 7.0E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 SUPERFAMILY SSF52172 720 835 2.13E-30 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 Gene3D G3DSA:1.10.287.130 457 522 1.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 SMART SM00387 574 683 3.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 PANTHER PTHR24423 438 834 1.6E-62 T 22-04-2016 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 9.0E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 Gene3D G3DSA:3.40.50.2300 717 836 1.0E-31 T 22-04-2016 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 SUPERFAMILY SSF47384 455 521 1.96E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 6.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 Pfam PF00072 Response regulator receiver domain 722 829 7.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 SUPERFAMILY SSF55874 521 682 1.96E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06305 c2ce0d88f287742441b6a677553792e9 850 SMART SM00448 720 830 3.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 SUPERFAMILY SSF48179 167 290 2.86E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 Gene3D G3DSA:1.10.1040.10 174 291 2.7E-43 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 SUPERFAMILY SSF51735 2 165 2.55E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 3.6E-79 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 2.8E-31 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 PANTHER PTHR21708:SF24 1 296 2.6E-74 T 22-04-2016 VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 290 4.3E-36 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 PANTHER PTHR21708 1 296 2.6E-74 T 22-04-2016 VPUCM_RS04410 d269c82873ed73c850b926807b5bdf93 296 Gene3D G3DSA:3.40.50.720 2 173 2.0E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01000 f6b1b9f6e3f5f7fcebfe9cf0a8527cc1 235 Gene3D G3DSA:1.10.510.10 148 216 2.0E-12 T 22-04-2016 VPUCM_RS01000 f6b1b9f6e3f5f7fcebfe9cf0a8527cc1 235 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 234 38.111 T 22-04-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676|UniPathway: UPA00958 VPUCM_RS01000 f6b1b9f6e3f5f7fcebfe9cf0a8527cc1 235 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 4.7E-60 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 VPUCM_RS01000 f6b1b9f6e3f5f7fcebfe9cf0a8527cc1 235 SUPERFAMILY SSF56112 46 233 2.56E-18 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS11345 293f0c97e0c7061b0902608b2616ff98 174 SUPERFAMILY SSF52218 1 169 1.06E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS11345 293f0c97e0c7061b0902608b2616ff98 174 Gene3D G3DSA:3.40.50.360 1 170 8.9E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS11345 293f0c97e0c7061b0902608b2616ff98 174 PANTHER PTHR30543 1 170 2.4E-36 T 22-04-2016 VPUCM_RS11345 293f0c97e0c7061b0902608b2616ff98 174 PANTHER PTHR30543:SF6 1 170 2.4E-36 T 22-04-2016 VPUCM_RS11345 293f0c97e0c7061b0902608b2616ff98 174 Pfam PF03358 NADPH-dependent FMN reductase 1 134 3.1E-26 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VPUCM_RS15295 65822d620e925cebc2d3f701c118d916 142 SUPERFAMILY SSF55729 15 109 2.28E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS15295 65822d620e925cebc2d3f701c118d916 142 Pfam PF13673 Acetyltransferase (GNAT) domain 24 108 8.8E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS15295 65822d620e925cebc2d3f701c118d916 142 Gene3D G3DSA:3.40.630.30 25 111 2.8E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.8E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.8E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.8E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.8E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.10.10.10 175 238 9.9E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 PANTHER PTHR30385 5 244 6.0E-78 T 22-04-2016 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.10.601.10 16 83 1.5E-16 T 22-04-2016 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.10.10.10 91 138 9.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.854 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 1.3E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88659 92 164 5.23E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04542 Sigma-70 region 2 19 91 5.8E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 PANTHER PTHR30385:SF7 5 244 6.0E-78 T 22-04-2016 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88946 6 91 3.79E-24 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04539 Sigma-70 region 3 100 161 6.7E-12 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88659 155 239 9.53E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 PIRSF PIRSF000770 2 243 8.5E-40 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04545 Sigma-70, region 4 187 234 3.3E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11515 8f53a4f75eccb81c0e9a8d16030b91f3 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 6.3E-87 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS04905 c7095f7048b2761682a48491c6291eaf 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 5.2E-78 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VPUCM_RS04905 c7095f7048b2761682a48491c6291eaf 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.1E-32 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VPUCM_RS04905 c7095f7048b2761682a48491c6291eaf 220 Gene3D G3DSA:2.160.20.70 101 218 2.4E-38 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VPUCM_RS04905 c7095f7048b2761682a48491c6291eaf 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.4E-30 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VPUCM_RS04905 c7095f7048b2761682a48491c6291eaf 220 PANTHER PTHR34108:SF1 1 205 2.9E-60 T 22-04-2016 VPUCM_RS04905 c7095f7048b2761682a48491c6291eaf 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.089 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VPUCM_RS04905 c7095f7048b2761682a48491c6291eaf 220 SUPERFAMILY SSF63848 113 216 9.68E-30 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VPUCM_RS04905 c7095f7048b2761682a48491c6291eaf 220 PANTHER PTHR34108 1 205 2.9E-60 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.4E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.871 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 Gene3D G3DSA:3.50.30.20 5 144 2.7E-63 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 1.8E-150 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PANTHER PTHR11405 3 173 1.6E-252 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PANTHER PTHR11405 189 377 1.6E-252 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 SMART SM01097 3 133 3.8E-93 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 Gene3D G3DSA:3.40.50.880 154 377 1.1E-82 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.4E-47 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 SUPERFAMILY SSF52317 153 377 2.14E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 22-04-2016 VPUCM_RS02310 c93dadaefd81d114945f85e754afcb2a 379 SUPERFAMILY SSF52021 5 142 7.06E-58 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VPUCM_RS11950 f9cf322abe66815e1a7f926de1b36406 135 SUPERFAMILY SSF54631 7 126 4.3E-24 T 22-04-2016 VPUCM_RS11950 f9cf322abe66815e1a7f926de1b36406 135 Pfam PF00571 CBS domain 78 125 4.8E-10 T 22-04-2016 IPR000644 CBS domain VPUCM_RS11950 f9cf322abe66815e1a7f926de1b36406 135 Gene3D G3DSA:3.10.580.10 8 126 3.1E-23 T 22-04-2016 VPUCM_RS11950 f9cf322abe66815e1a7f926de1b36406 135 SMART SM00116 83 130 2.1E-5 T 22-04-2016 IPR000644 CBS domain VPUCM_RS11950 f9cf322abe66815e1a7f926de1b36406 135 SMART SM00116 16 65 11.0 T 22-04-2016 IPR000644 CBS domain VPUCM_RS10165 8d517f2a67c195a71b25614940789531 539 Gene3D G3DSA:3.90.76.10 42 222 2.3E-39 T 22-04-2016 VPUCM_RS10165 8d517f2a67c195a71b25614940789531 539 SUPERFAMILY SSF53850 35 535 9.23E-131 T 22-04-2016 VPUCM_RS10165 8d517f2a67c195a71b25614940789531 539 PANTHER PTHR30290:SF28 1 538 2.8E-244 T 22-04-2016 VPUCM_RS10165 8d517f2a67c195a71b25614940789531 539 PANTHER PTHR30290 1 538 2.8E-244 T 22-04-2016 VPUCM_RS10165 8d517f2a67c195a71b25614940789531 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 1.2E-85 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VPUCM_RS10165 8d517f2a67c195a71b25614940789531 539 PIRSF PIRSF002741 4 538 3.3E-91 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VPUCM_RS10165 8d517f2a67c195a71b25614940789531 539 Gene3D G3DSA:3.10.105.10 293 508 7.3E-58 T 22-04-2016 VPUCM_RS01350 4b57a4d108365061fb9c46d02f3d326b 256 SUPERFAMILY SSF51351 2 250 5.11E-89 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VPUCM_RS01350 4b57a4d108365061fb9c46d02f3d326b 256 Gene3D G3DSA:3.20.20.70 1 253 4.2E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS01350 4b57a4d108365061fb9c46d02f3d326b 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 4.3E-78 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VPUCM_RS01350 4b57a4d108365061fb9c46d02f3d326b 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VPUCM_RS01350 4b57a4d108365061fb9c46d02f3d326b 256 Pfam PF00121 Triosephosphate isomerase 5 247 2.0E-87 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VPUCM_RS01350 4b57a4d108365061fb9c46d02f3d326b 256 PANTHER PTHR21139 1 256 8.2E-123 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VPUCM_RS01350 4b57a4d108365061fb9c46d02f3d326b 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.741 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 PANTHER PTHR11177:SF195 496 836 1.5E-58 T 22-04-2016 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 Gene3D G3DSA:3.20.20.80 524 836 6.8E-58 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 SUPERFAMILY SSF51055 17 78 1.96E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 Pfam PF00704 Glycosyl hydrolases family 18 527 827 5.3E-24 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 Pfam PF02839 Carbohydrate binding domain 29 68 6.6E-10 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 SUPERFAMILY SSF51445 524 835 6.55E-48 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 ProSitePatterns PS01095 Chitinases family 18 active site. 639 647 - T 22-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 SMART SM00495 279 328 0.0094 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 SMART SM00495 28 74 1.4E-10 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 SMART SM00636 525 827 2.7E-4 T 22-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 Gene3D G3DSA:2.10.10.20 24 77 6.3E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS04540 d3842f6a11da716baede109bc9bfe8bb 848 PANTHER PTHR11177 496 836 1.5E-58 T 22-04-2016 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 PANTHER PTHR30332:SF5 18 597 3.7E-174 T 22-04-2016 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 473 506 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 Pfam PF00263 Bacterial type II and III secretion system protein 367 527 2.5E-36 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 Pfam PF03958 Bacterial type II/III secretion system short domain 184 293 3.1E-15 T 22-04-2016 IPR005644 NolW-like VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 36 528 3.5E-150 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 PANTHER PTHR30332 18 597 3.7E-174 T 22-04-2016 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 380 399 5.5E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 506 525 5.5E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 414 429 5.5E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 196 213 5.5E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPUCM_RS08820 733f8b40829a8fd4d14de5437164871c 624 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 296 316 5.5E-39 T 22-04-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 VPUCM_RS12895 bd7851be12ca98a36ee7e524348165c6 409 PANTHER PTHR11730:SF6 2 404 1.3E-143 T 22-04-2016 VPUCM_RS12895 bd7851be12ca98a36ee7e524348165c6 409 SUPERFAMILY SSF111352 12 383 4.45E-105 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VPUCM_RS12895 bd7851be12ca98a36ee7e524348165c6 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 1.1E-204 T 22-04-2016 IPR019879 Ammonium transporter, marine subtype VPUCM_RS12895 bd7851be12ca98a36ee7e524348165c6 409 Gene3D G3DSA:1.10.3430.10 27 398 1.3E-108 T 22-04-2016 IPR029020 Ammonium/urea transporter VPUCM_RS12895 bd7851be12ca98a36ee7e524348165c6 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VPUCM_RS12895 bd7851be12ca98a36ee7e524348165c6 409 PANTHER PTHR11730 2 404 1.3E-143 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VPUCM_RS12895 bd7851be12ca98a36ee7e524348165c6 409 Pfam PF00909 Ammonium Transporter Family 18 402 4.8E-101 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VPUCM_RS16835 7fc46fba6497631c67cec47a282f4656 134 PANTHER PTHR38831:SF1 1 134 1.7E-28 T 22-04-2016 VPUCM_RS16835 7fc46fba6497631c67cec47a282f4656 134 Gene3D G3DSA:1.10.40.60 6 121 8.7E-39 T 22-04-2016 VPUCM_RS16835 7fc46fba6497631c67cec47a282f4656 134 Pfam PF03934 Type II secretion system (T2SS), protein K 1 130 4.4E-41 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VPUCM_RS16835 7fc46fba6497631c67cec47a282f4656 134 SUPERFAMILY SSF158544 8 120 7.59E-34 T 22-04-2016 VPUCM_RS16835 7fc46fba6497631c67cec47a282f4656 134 PANTHER PTHR38831 1 134 1.7E-28 T 22-04-2016 VPUCM_RS01580 dbd270841fad3b440ca51a1e8375fb9f 153 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 1.5E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS01580 dbd270841fad3b440ca51a1e8375fb9f 153 PANTHER PTHR23091:SF275 9 153 3.7E-45 T 22-04-2016 VPUCM_RS01580 dbd270841fad3b440ca51a1e8375fb9f 153 SUPERFAMILY SSF55729 1 150 2.48E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS01580 dbd270841fad3b440ca51a1e8375fb9f 153 PANTHER PTHR23091 9 153 3.7E-45 T 22-04-2016 VPUCM_RS01580 dbd270841fad3b440ca51a1e8375fb9f 153 Gene3D G3DSA:3.40.630.30 3 148 3.2E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS14605 179a16c1356a0771f282490c6be1276c 339 SUPERFAMILY SSF55729 1 338 5.04E-129 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS14605 179a16c1356a0771f282490c6be1276c 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 5.1E-133 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VPUCM_RS14605 179a16c1356a0771f282490c6be1276c 339 PANTHER PTHR30420:SF1 1 338 2.2E-186 T 22-04-2016 VPUCM_RS14605 179a16c1356a0771f282490c6be1276c 339 PANTHER PTHR30420 1 338 2.2E-186 T 22-04-2016 VPUCM_RS14605 179a16c1356a0771f282490c6be1276c 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 1.8E-137 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VPUCM_RS14605 179a16c1356a0771f282490c6be1276c 339 Gene3D G3DSA:2.40.40.20 278 338 2.2E-14 T 22-04-2016 VPUCM_RS14605 179a16c1356a0771f282490c6be1276c 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 2.5E-132 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 PANTHER PTHR11938:SF93 23 470 1.2E-297 T 22-04-2016 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 6.9E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 SUPERFAMILY SSF51971 145 399 3.35E-69 T 22-04-2016 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.9E-39 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 Gene3D G3DSA:3.50.50.60 237 398 1.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.1E-251 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 Gene3D G3DSA:3.40.50.720 150 236 1.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 Gene3D G3DSA:3.40.50.720 399 469 1.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 SUPERFAMILY SSF46548 6 157 1.36E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 Gene3D G3DSA:1.10.1060.10 5 149 1.6E-47 T 22-04-2016 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.2E-36 T 22-04-2016 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.2E-36 T 22-04-2016 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.2E-36 T 22-04-2016 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.2E-36 T 22-04-2016 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.2E-36 T 22-04-2016 VPUCM_RS02375 df5a7e9f86df7945b5b05a2a36730dd4 470 PANTHER PTHR11938 23 470 1.2E-297 T 22-04-2016 VPUCM_RS07870 7d0fcae2e007f655f1f6221b9484e577 159 Gene3D G3DSA:2.40.160.20 6 158 4.1E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS07870 7d0fcae2e007f655f1f6221b9484e577 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 1.1E-17 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VPUCM_RS07870 7d0fcae2e007f655f1f6221b9484e577 159 SUPERFAMILY SSF56925 17 158 8.89E-21 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 296 3.4E-43 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 SMART SM00267 130 301 3.5E-50 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 SUPERFAMILY SSF55073 146 302 4.55E-43 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 Gene3D G3DSA:3.30.450.20 6 116 1.3E-5 T 22-04-2016 VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 Gene3D G3DSA:3.30.70.270 143 305 1.9E-49 T 22-04-2016 VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 SUPERFAMILY SSF55785 5 84 9.0E-5 T 22-04-2016 IPR000014 PAS domain VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 PANTHER PTHR10799:SF750 174 299 1.3E-27 T 22-04-2016 VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 PANTHER PTHR10799:SF750 53 121 1.3E-27 T 22-04-2016 VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 299 1.5E-45 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 PANTHER PTHR10799 174 299 1.3E-27 T 22-04-2016 VPUCM_RS04395 2ca82d0eb3488f52dd7780034f659a41 306 PANTHER PTHR10799 53 121 1.3E-27 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PANTHER PTHR10133 6 288 0.0 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PANTHER PTHR10133 318 930 0.0 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.5E-28 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Gene3D G3DSA:1.10.150.20 187 253 1.3E-25 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 TIGRFAM TIGR00593 pola: DNA polymerase I 9 931 1.4E-287 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 SUPERFAMILY SSF56672 524 931 1.33E-160 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 SUPERFAMILY SSF47807 171 291 6.58E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.4E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PANTHER PTHR10133:SF27 6 288 0.0 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PANTHER PTHR10133:SF27 318 930 0.0 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 SUPERFAMILY SSF88723 7 170 8.59E-58 T 22-04-2016 IPR029060 PIN domain-like VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Gene3D G3DSA:1.20.1060.10 545 665 2.6E-39 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 SMART SM00279 173 208 1.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 SUPERFAMILY SSF53098 335 520 1.1E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Gene3D G3DSA:3.30.70.370 821 931 9.3E-66 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Gene3D G3DSA:3.30.70.370 666 713 9.3E-66 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 878 891 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 2.0E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 SMART SM00482 688 895 2.7E-116 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Pfam PF01612 3'-5' exonuclease 332 516 1.7E-39 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Gene3D G3DSA:3.40.50.1010 8 186 1.4E-73 T 22-04-2016 IPR029060 PIN domain-like VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Gene3D G3DSA:1.10.150.20 714 820 7.1E-36 T 22-04-2016 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Gene3D G3DSA:3.30.420.10 331 544 5.0E-85 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 SMART SM00474 332 519 1.8E-41 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 SMART SM00475 7 267 6.2E-122 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VPUCM_RS00540 55df48441c7c0423f6335d3c46ccfdcc 931 Pfam PF00476 DNA polymerase family A 553 928 1.6E-158 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 PANTHER PTHR23135 17 467 6.5E-229 T 22-04-2016 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.0E-187 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 Gene3D G3DSA:3.40.1190.10 111 328 1.3E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 3.4E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 SUPERFAMILY SSF53623 108 322 3.79E-72 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.716 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 SUPERFAMILY SSF51984 23 109 6.02E-29 T 22-04-2016 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 SUPERFAMILY SSF53244 326 474 1.48E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 Gene3D G3DSA:3.40.50.720 25 110 8.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 Gene3D G3DSA:3.90.190.20 329 475 2.8E-58 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 Pfam PF01225 Mur ligase family, catalytic domain 25 121 4.0E-28 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 PANTHER PTHR23135:SF5 17 467 6.5E-229 T 22-04-2016 VPUCM_RS02265 b60013ac08e11fda69918be7f5f5c82d 485 Pfam PF08245 Mur ligase middle domain 127 307 2.7E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 SUPERFAMILY SSF56112 489 786 5.53E-50 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 PANTHER PTHR24362:SF160 337 800 4.8E-112 T 22-04-2016 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 PANTHER PTHR24362:SF160 1345 1369 4.8E-112 T 22-04-2016 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 Gene3D G3DSA:3.30.200.20 484 602 1.6E-17 T 22-04-2016 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 PANTHER PTHR24362 337 800 4.8E-112 T 22-04-2016 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 PANTHER PTHR24362 1345 1369 4.8E-112 T 22-04-2016 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 Pfam PF00069 Protein kinase domain 504 706 2.0E-31 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 Pfam PF00069 Protein kinase domain 235 455 1.6E-26 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 SMART SM00220 504 755 9.7E-32 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 SMART SM00220 191 457 7.8E-11 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 Gene3D G3DSA:3.30.200.20 235 309 1.3E-5 T 22-04-2016 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 SUPERFAMILY SSF56112 190 469 6.88E-39 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 Gene3D G3DSA:1.10.510.10 310 457 3.4E-28 T 22-04-2016 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 Gene3D G3DSA:1.10.510.10 603 779 3.7E-27 T 22-04-2016 VPUCM_RS05885 c2d6a6a016f8dd8bf24a25b5f9635e58 1376 Pfam PF08378 Nuclease-related domain 13 123 2.1E-13 T 22-04-2016 IPR011528 Nuclease-related domain, NERD VPUCM_RS09995 ed35775d2113cf2ca1390b801196bdd6 291 Pfam PF00665 Integrase core domain 123 237 7.7E-36 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VPUCM_RS09995 ed35775d2113cf2ca1390b801196bdd6 291 Pfam PF13276 HTH-like domain 46 97 1.6E-12 T 22-04-2016 IPR025948 HTH-like domain VPUCM_RS09995 ed35775d2113cf2ca1390b801196bdd6 291 SUPERFAMILY SSF53098 117 282 3.79E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS09995 ed35775d2113cf2ca1390b801196bdd6 291 PANTHER PTHR32552 1 286 4.1E-73 T 22-04-2016 VPUCM_RS09995 ed35775d2113cf2ca1390b801196bdd6 291 Gene3D G3DSA:3.30.420.10 118 276 7.1E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS05800 ed35775d2113cf2ca1390b801196bdd6 291 Pfam PF00665 Integrase core domain 123 237 7.7E-36 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VPUCM_RS05800 ed35775d2113cf2ca1390b801196bdd6 291 Pfam PF13276 HTH-like domain 46 97 1.6E-12 T 22-04-2016 IPR025948 HTH-like domain VPUCM_RS05800 ed35775d2113cf2ca1390b801196bdd6 291 SUPERFAMILY SSF53098 117 282 3.79E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS05800 ed35775d2113cf2ca1390b801196bdd6 291 PANTHER PTHR32552 1 286 4.1E-73 T 22-04-2016 VPUCM_RS05800 ed35775d2113cf2ca1390b801196bdd6 291 Gene3D G3DSA:3.30.420.10 118 276 7.1E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS07130 ed35775d2113cf2ca1390b801196bdd6 291 Pfam PF00665 Integrase core domain 123 237 7.7E-36 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VPUCM_RS07130 ed35775d2113cf2ca1390b801196bdd6 291 Pfam PF13276 HTH-like domain 46 97 1.6E-12 T 22-04-2016 IPR025948 HTH-like domain VPUCM_RS07130 ed35775d2113cf2ca1390b801196bdd6 291 SUPERFAMILY SSF53098 117 282 3.79E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS07130 ed35775d2113cf2ca1390b801196bdd6 291 PANTHER PTHR32552 1 286 4.1E-73 T 22-04-2016 VPUCM_RS07130 ed35775d2113cf2ca1390b801196bdd6 291 Gene3D G3DSA:3.30.420.10 118 276 7.1E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS03240 ed35775d2113cf2ca1390b801196bdd6 291 Pfam PF00665 Integrase core domain 123 237 7.7E-36 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VPUCM_RS03240 ed35775d2113cf2ca1390b801196bdd6 291 Pfam PF13276 HTH-like domain 46 97 1.6E-12 T 22-04-2016 IPR025948 HTH-like domain VPUCM_RS03240 ed35775d2113cf2ca1390b801196bdd6 291 SUPERFAMILY SSF53098 117 282 3.79E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS03240 ed35775d2113cf2ca1390b801196bdd6 291 PANTHER PTHR32552 1 286 4.1E-73 T 22-04-2016 VPUCM_RS03240 ed35775d2113cf2ca1390b801196bdd6 291 Gene3D G3DSA:3.30.420.10 118 276 7.1E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 2.1E-44 T 22-04-2016 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:2.40.30.10 243 359 6.0E-20 T 22-04-2016 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF50465 332 434 4.12E-30 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 2.3E-197 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF50447 243 324 1.72E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 2.3E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 PANTHER PTHR23115 11 359 2.6E-76 T 22-04-2016 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:3.40.50.300 18 234 3.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 PANTHER PTHR23115:SF91 11 359 2.6E-76 T 22-04-2016 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.679 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01610 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF52540 18 235 1.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 PANTHER PTHR28629:SF2 1 241 6.3E-155 T 22-04-2016 VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 PANTHER PTHR28629:SF2 259 352 6.3E-155 T 22-04-2016 VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 Gene3D G3DSA:3.30.1180.20 182 352 2.0E-63 T 22-04-2016 VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 349 6.5E-142 T 22-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 Gene3D G3DSA:3.40.50.10440 11 180 5.0E-66 T 22-04-2016 VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 SUPERFAMILY SSF82549 10 352 3.66E-124 T 22-04-2016 VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 Pfam PF02733 Dak1 domain 17 348 2.1E-124 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 PANTHER PTHR28629 1 241 6.3E-155 T 22-04-2016 VPUCM_RS01930 b85ef63690b10a355a7d63cf8d1a4280 352 PANTHER PTHR28629 259 352 6.3E-155 T 22-04-2016 VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 SUPERFAMILY SSF117892 53 187 1.7E-40 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 SMART SM00244 22 180 1.9E-58 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 PANTHER PTHR10264 2 301 3.2E-118 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 PANTHER PTHR10264:SF27 2 301 3.2E-118 T 22-04-2016 VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 77 98 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 175 196 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 156 174 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 112 129 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 132 155 3.5E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 Pfam PF01145 SPFH domain / Band 7 family 26 195 4.0E-34 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS12025 bdb1d7b7e466aa4fea049f5df8ceb888 305 Pfam PF16200 C-terminal region of band_7 242 303 1.8E-7 T 22-04-2016 IPR032435 Band 7, C-terminal extension VPUCM_RS04580 071187246e16da1d093296d27cb8a9b6 528 Pfam PF03806 AbgT putative transporter family 19 526 6.2E-226 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VPUCM_RS04580 071187246e16da1d093296d27cb8a9b6 528 PANTHER PTHR30282:SF0 5 528 6.0E-289 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VPUCM_RS04580 071187246e16da1d093296d27cb8a9b6 528 PANTHER PTHR30282 5 528 6.0E-289 T 22-04-2016 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 PANTHER PTHR11493:SF47 20 567 9.1E-274 T 22-04-2016 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Gene3D G3DSA:3.90.480.10 79 151 2.5E-61 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Gene3D G3DSA:3.90.480.10 348 429 2.5E-61 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.634 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Gene3D G3DSA:3.30.413.10 436 565 9.9E-34 T 22-04-2016 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Gene3D G3DSA:3.30.413.10 154 346 5.3E-71 T 22-04-2016 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 SUPERFAMILY SSF55124 18 150 1.29E-27 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 5.2E-5 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 336 1.5E-45 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 2.8E-287 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 SUPERFAMILY SSF56014 154 350 4.45E-58 T 22-04-2016 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 SUPERFAMILY SSF55124 352 430 2.13E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 SUPERFAMILY SSF56014 435 566 4.45E-32 T 22-04-2016 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 PANTHER PTHR11493 20 567 9.1E-274 T 22-04-2016 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 1.3E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 7.7E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14255 40995cabdb64827838deaca421c978ab 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS01855 bbea541769520262c116365699fafbb6 182 Pfam PF01569 PAP2 superfamily 73 180 3.0E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VPUCM_RS01855 bbea541769520262c116365699fafbb6 182 PANTHER PTHR14969 23 179 3.3E-29 T 22-04-2016 VPUCM_RS01855 bbea541769520262c116365699fafbb6 182 Gene3D G3DSA:1.20.144.10 12 178 2.9E-41 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VPUCM_RS01855 bbea541769520262c116365699fafbb6 182 SMART SM00014 71 177 3.9E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VPUCM_RS01855 bbea541769520262c116365699fafbb6 182 SUPERFAMILY SSF48317 12 179 6.93E-38 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VPUCM_RS05480 940cb81c2735a20359345609e5532363 182 PANTHER PTHR13256:SF43 1 180 2.9E-48 T 22-04-2016 VPUCM_RS05480 940cb81c2735a20359345609e5532363 182 SUPERFAMILY SSF55729 3 177 9.19E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS05480 940cb81c2735a20359345609e5532363 182 Gene3D G3DSA:3.40.630.30 2 177 3.4E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS05480 940cb81c2735a20359345609e5532363 182 PANTHER PTHR13256 1 180 2.9E-48 T 22-04-2016 VPUCM_RS05480 940cb81c2735a20359345609e5532363 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 153 2.8E-23 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS09180 f6f31a1c8cb3d396c14d9069ac76816d 502 PANTHER PTHR33121 6 497 5.5E-143 T 22-04-2016 VPUCM_RS09180 f6f31a1c8cb3d396c14d9069ac76816d 502 SUPERFAMILY SSF141868 264 496 2.88E-64 T 22-04-2016 IPR001633 EAL domain VPUCM_RS09180 f6f31a1c8cb3d396c14d9069ac76816d 502 PANTHER PTHR33121:SF1 6 497 5.5E-143 T 22-04-2016 VPUCM_RS09180 f6f31a1c8cb3d396c14d9069ac76816d 502 Gene3D G3DSA:3.20.20.450 263 496 6.4E-64 T 22-04-2016 IPR001633 EAL domain VPUCM_RS09180 f6f31a1c8cb3d396c14d9069ac76816d 502 Pfam PF00563 EAL domain 264 489 3.8E-52 T 22-04-2016 IPR001633 EAL domain VPUCM_RS09180 f6f31a1c8cb3d396c14d9069ac76816d 502 SMART SM00052 256 494 1.0E-66 T 22-04-2016 IPR001633 EAL domain VPUCM_RS14510 83c2b1a4a8a0ececc59178eca1086de0 118 PANTHER PTHR38780 1 118 4.2E-42 T 22-04-2016 VPUCM_RS14510 83c2b1a4a8a0ececc59178eca1086de0 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 5.8E-46 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF VPUCM_RS14510 83c2b1a4a8a0ececc59178eca1086de0 118 SUPERFAMILY SSF75169 3 118 7.2E-36 T 22-04-2016 IPR027396 DsrEFH-like VPUCM_RS14510 83c2b1a4a8a0ececc59178eca1086de0 118 Gene3D G3DSA:3.40.1260.10 3 118 5.7E-45 T 22-04-2016 IPR027396 DsrEFH-like VPUCM_RS14510 83c2b1a4a8a0ececc59178eca1086de0 118 PANTHER PTHR38780:SF1 1 118 4.2E-42 T 22-04-2016 VPUCM_RS14510 83c2b1a4a8a0ececc59178eca1086de0 118 Pfam PF02635 DsrE/DsrF-like family 4 118 1.5E-25 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 SUPERFAMILY SSF52540 4 286 3.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 Gene3D G3DSA:3.40.50.300 1 288 1.8E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 PANTHER PTHR10285 1 284 1.2E-151 T 22-04-2016 VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.7E-69 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VPUCM_RS14585 226ad5b10ad81930190a037fe9085522 289 PANTHER PTHR10285:SF72 1 284 1.2E-151 T 22-04-2016 VPUCM_RS05975 9a19bd7a8f3a93a85de4e77ab43779c1 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 3.4E-63 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VPUCM_RS05975 9a19bd7a8f3a93a85de4e77ab43779c1 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 196 1.2E-55 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VPUCM_RS05975 9a19bd7a8f3a93a85de4e77ab43779c1 208 SUPERFAMILY SSF89392 30 207 2.63E-51 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VPUCM_RS05975 9a19bd7a8f3a93a85de4e77ab43779c1 208 Gene3D G3DSA:2.50.20.10 30 207 1.0E-53 T 22-04-2016 VPUCM_RS05975 9a19bd7a8f3a93a85de4e77ab43779c1 208 PANTHER PTHR35869 13 208 3.6E-51 T 22-04-2016 VPUCM_RS05975 9a19bd7a8f3a93a85de4e77ab43779c1 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.852 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VPUCM_RS09510 0a51cb60b78b5b4cb6f06d7951cc72c0 231 SUPERFAMILY SSF51735 7 219 1.06E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09510 0a51cb60b78b5b4cb6f06d7951cc72c0 231 PANTHER PTHR14097:SF7 1 226 7.3E-55 T 22-04-2016 VPUCM_RS09510 0a51cb60b78b5b4cb6f06d7951cc72c0 231 PANTHER PTHR14097 1 226 7.3E-55 T 22-04-2016 VPUCM_RS09510 0a51cb60b78b5b4cb6f06d7951cc72c0 231 Pfam PF13460 NAD(P)H-binding 13 162 1.0E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09510 0a51cb60b78b5b4cb6f06d7951cc72c0 231 Gene3D G3DSA:3.40.50.720 7 210 1.1E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 Gene3D G3DSA:3.30.565.10 456 610 3.2E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 Gene3D G3DSA:1.10.287.130 389 450 9.2E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 Gene3D G3DSA:3.40.190.10 139 245 1.1E-8 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 SUPERFAMILY SSF53850 64 291 1.73E-17 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 SMART SM00387 498 611 2.0E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 SMART SM00388 387 456 2.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 609 8.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 62 295 2.3E-38 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 SUPERFAMILY SSF47384 380 452 4.51E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 393 452 4.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 PANTHER PTHR24423:SF485 296 334 7.1E-40 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 PANTHER PTHR24423:SF485 1 11 7.1E-40 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 PANTHER PTHR24423:SF485 371 608 7.1E-40 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 SUPERFAMILY SSF55874 445 609 1.44E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 PANTHER PTHR24423 296 334 7.1E-40 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 PANTHER PTHR24423 1 11 7.1E-40 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 PANTHER PTHR24423 371 608 7.1E-40 T 22-04-2016 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 8.04E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS10355 b1a2e768b01a69b8738081f16e419f4f 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 8.04E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 PANTHER PTHR24222 1 573 7.2E-236 T 22-04-2016 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 Gene3D G3DSA:1.20.1560.10 8 327 4.9E-31 T 22-04-2016 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 Gene3D G3DSA:3.40.50.300 339 568 2.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 SUPERFAMILY SSF52540 335 571 8.73E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 Pfam PF00664 ABC transporter transmembrane region 53 272 3.9E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 SUPERFAMILY SSF90123 7 323 2.35E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 4.8E-134 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 Pfam PF00005 ABC transporter 356 502 6.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 PANTHER PTHR24222:SF30 1 573 7.2E-236 T 22-04-2016 VPUCM_RS09780 d9940ebd2335f3948e0ab38b07e42ed3 573 SMART SM00382 365 549 1.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 200 1.3E-62 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 Pfam PF13241 Putative NAD(P)-binding 6 116 1.2E-31 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 Gene3D G3DSA:3.30.160.110 114 149 4.4E-18 T 22-04-2016 VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 PANTHER PTHR35330 1 229 1.4E-57 T 22-04-2016 VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 SUPERFAMILY SSF51735 1 113 4.6E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 Gene3D G3DSA:1.10.8.210 150 207 5.2E-20 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 Gene3D G3DSA:3.40.50.720 1 113 1.3E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.0E-7 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 SUPERFAMILY SSF75615 109 206 3.4E-26 T 22-04-2016 VPUCM_RS08435 a3f801db853f9b47d41aa4441f3f6570 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 198 3.2E-13 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 Gene3D G3DSA:3.40.50.150 108 297 3.2E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 1.1E-96 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 PANTHER PTHR18895 4 298 6.0E-181 T 22-04-2016 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 Gene3D G3DSA:1.10.8.10 15 106 1.2E-5 T 22-04-2016 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.02 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 Pfam PF05175 Methyltransferase small domain 134 223 2.3E-18 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 6.7E-139 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 PANTHER PTHR18895:SF66 4 298 6.0E-181 T 22-04-2016 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 PIRSF PIRSF037167 2 307 5.8E-150 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VPUCM_RS11370 a0d4975cf3a84541c4e3dd71f266ee4d 310 SUPERFAMILY SSF53335 16 295 5.23E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Pfam PF00204 DNA gyrase B 221 391 1.4E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 794 1.9E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PANTHER PTHR10169 725 805 0.0 T 22-04-2016 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PANTHER PTHR10169 1 554 0.0 T 22-04-2016 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 2.3E-85 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 SMART SM00433 35 798 9.0E-274 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 7.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.9E-70 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 SUPERFAMILY SSF55874 4 212 2.88E-75 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Pfam PF01751 Toprim domain 420 532 8.3E-19 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 SMART SM00387 31 175 2.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 SUPERFAMILY SSF54211 221 393 1.1E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Gene3D G3DSA:3.30.565.10 15 214 1.1E-93 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Gene3D G3DSA:3.30.230.10 220 393 1.7E-75 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 SUPERFAMILY SSF56719 395 561 1.1E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 SUPERFAMILY SSF56719 731 796 1.1E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 107.949 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Gene3D G3DSA:3.40.50.670 405 551 1.2E-101 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00060 7a2e088ac0ec3fbf93e882b7a2d19b58 805 Gene3D G3DSA:3.40.50.670 719 787 1.2E-101 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS13930 d2303323f0423e1f3766caf0cf953d91 212 PIRSF PIRSF004649 1 212 1.4E-56 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VPUCM_RS13930 d2303323f0423e1f3766caf0cf953d91 212 PANTHER PTHR36573 1 212 4.6E-64 T 22-04-2016 VPUCM_RS13930 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:1.10.10.640 78 112 9.2E-10 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VPUCM_RS13930 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:1.10.10.640 174 203 9.2E-10 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VPUCM_RS13930 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:3.10.450.50 27 71 3.9E-17 T 22-04-2016 IPR032710 NTF2-like domain VPUCM_RS13930 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:3.10.450.50 115 173 3.9E-17 T 22-04-2016 IPR032710 NTF2-like domain VPUCM_RS13930 d2303323f0423e1f3766caf0cf953d91 212 Pfam PF05494 MlaC protein 33 200 7.9E-46 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VPUCM_RS07125 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215:SF1 1 91 5.5E-30 T 22-04-2016 VPUCM_RS07125 2ef394599149ed986d17b76d5df10867 92 Pfam PF01527 Transposase 4 70 8.2E-18 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VPUCM_RS07125 2ef394599149ed986d17b76d5df10867 92 SUPERFAMILY SSF46689 1 89 4.12E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS07125 2ef394599149ed986d17b76d5df10867 92 Gene3D G3DSA:1.10.10.60 8 86 4.2E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS07125 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215 1 91 5.5E-30 T 22-04-2016 VPUCM_RS05805 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215:SF1 1 91 5.5E-30 T 22-04-2016 VPUCM_RS05805 2ef394599149ed986d17b76d5df10867 92 Pfam PF01527 Transposase 4 70 8.2E-18 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VPUCM_RS05805 2ef394599149ed986d17b76d5df10867 92 SUPERFAMILY SSF46689 1 89 4.12E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS05805 2ef394599149ed986d17b76d5df10867 92 Gene3D G3DSA:1.10.10.60 8 86 4.2E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS05805 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215 1 91 5.5E-30 T 22-04-2016 VPUCM_RS10000 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215:SF1 1 91 5.5E-30 T 22-04-2016 VPUCM_RS10000 2ef394599149ed986d17b76d5df10867 92 Pfam PF01527 Transposase 4 70 8.2E-18 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VPUCM_RS10000 2ef394599149ed986d17b76d5df10867 92 SUPERFAMILY SSF46689 1 89 4.12E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10000 2ef394599149ed986d17b76d5df10867 92 Gene3D G3DSA:1.10.10.60 8 86 4.2E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10000 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215 1 91 5.5E-30 T 22-04-2016 VPUCM_RS03245 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215:SF1 1 91 5.5E-30 T 22-04-2016 VPUCM_RS03245 2ef394599149ed986d17b76d5df10867 92 Pfam PF01527 Transposase 4 70 8.2E-18 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VPUCM_RS03245 2ef394599149ed986d17b76d5df10867 92 SUPERFAMILY SSF46689 1 89 4.12E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS03245 2ef394599149ed986d17b76d5df10867 92 Gene3D G3DSA:1.10.10.60 8 86 4.2E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS03245 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215 1 91 5.5E-30 T 22-04-2016 VPUCM_RS07480 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215:SF1 1 91 5.5E-30 T 22-04-2016 VPUCM_RS07480 2ef394599149ed986d17b76d5df10867 92 Pfam PF01527 Transposase 4 70 8.2E-18 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VPUCM_RS07480 2ef394599149ed986d17b76d5df10867 92 SUPERFAMILY SSF46689 1 89 4.12E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS07480 2ef394599149ed986d17b76d5df10867 92 Gene3D G3DSA:1.10.10.60 8 86 4.2E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS07480 2ef394599149ed986d17b76d5df10867 92 PANTHER PTHR33215 1 91 5.5E-30 T 22-04-2016 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 3.2E-30 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 Pfam PF08029 HisG, C-terminal domain 222 295 6.4E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 Gene3D G3DSA:3.30.70.120 225 298 4.5E-30 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.157 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 Gene3D G3DSA:3.40.190.10 2 138 2.0E-48 T 22-04-2016 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 8.5E-44 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 PANTHER PTHR21403:SF0 1 298 7.5E-120 T 22-04-2016 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 6.3E-55 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 PANTHER PTHR21403 1 298 7.5E-120 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 SUPERFAMILY SSF54913 225 297 5.89E-21 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VPUCM_RS06120 0daac0b748c891222f4fa6fd04ec7697 298 SUPERFAMILY SSF53850 5 222 1.71E-66 T 22-04-2016 VPUCM_RS03620 9031f9df1c6254db018e66a25f3e11a1 301 SUPERFAMILY SSF53098 48 221 4.61E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS03620 9031f9df1c6254db018e66a25f3e11a1 301 Gene3D G3DSA:3.30.420.10 49 211 1.4E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS03620 9031f9df1c6254db018e66a25f3e11a1 301 PANTHER PTHR30231 14 272 1.2E-26 T 22-04-2016 VPUCM_RS03620 9031f9df1c6254db018e66a25f3e11a1 301 SMART SM00479 51 217 8.7E-12 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS03620 9031f9df1c6254db018e66a25f3e11a1 301 PANTHER PTHR30231:SF4 14 272 1.2E-26 T 22-04-2016 VPUCM_RS03620 9031f9df1c6254db018e66a25f3e11a1 301 Pfam PF00929 Exonuclease 53 207 6.8E-13 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 SUPERFAMILY SSF54534 81 156 1.83E-24 T 22-04-2016 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 8.8E-54 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 PIRSF PIRSF006092 1 157 2.8E-47 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 Gene3D G3DSA:3.10.50.30 78 156 2.1E-32 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 7.5E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.3E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.018 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 Gene3D G3DSA:1.10.287.180 1 74 5.1E-28 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 SUPERFAMILY SSF46557 2 75 1.02E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VPUCM_RS03360 a7c4393a94f6925c83ea841d93342960 157 PANTHER PTHR30437 1 156 2.9E-63 T 22-04-2016 VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 4.9E-26 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 PANTHER PTHR11562:SF55 1 300 1.8E-115 T 22-04-2016 VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 3.4E-68 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 Gene3D G3DSA:3.30.70.1350 207 288 2.8E-30 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 SUPERFAMILY SSF161111 8 207 7.19E-50 T 22-04-2016 VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 Pfam PF01545 Cation efflux family 15 206 1.5E-42 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 Gene3D G3DSA:1.20.1510.10 11 206 2.3E-41 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 SUPERFAMILY SSF160240 210 287 3.66E-24 T 22-04-2016 VPUCM_RS14950 e1a226f357b9c8849e27543acc987537 302 PANTHER PTHR11562 1 300 1.8E-115 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 Gene3D G3DSA:3.40.50.360 1 171 7.9E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 PANTHER PTHR19384:SF77 143 174 1.2E-104 T 22-04-2016 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 PANTHER PTHR19384:SF77 1 120 1.2E-104 T 22-04-2016 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 PIRSF PIRSF038996 1 174 2.0E-66 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 Pfam PF00258 Flavodoxin 6 162 2.2E-32 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 PANTHER PTHR19384 143 174 1.2E-104 T 22-04-2016 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 PANTHER PTHR19384 1 120 1.2E-104 T 22-04-2016 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 1.1E-70 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VPUCM_RS11855 382c19062eab2660429cb5f9e682eaae 177 SUPERFAMILY SSF52218 4 172 7.14E-51 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 Pfam PF08448 PAS fold 15 119 1.2E-6 T 22-04-2016 IPR013656 PAS fold-4 VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 SUPERFAMILY SSF55073 258 412 2.43E-45 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 Gene3D G3DSA:3.30.450.20 119 210 1.6E-8 T 22-04-2016 VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 Gene3D G3DSA:3.30.450.20 6 111 9.6E-10 T 22-04-2016 VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 407 1.8E-36 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 Gene3D G3DSA:3.30.70.270 255 418 1.2E-50 T 22-04-2016 VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 PANTHER PTHR33121:SF13 372 678 6.2E-81 T 22-04-2016 VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 SUPERFAMILY SSF55785 115 210 1.94E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 Gene3D G3DSA:3.20.20.450 424 673 6.0E-93 T 22-04-2016 IPR001633 EAL domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 PANTHER PTHR33121 372 678 6.2E-81 T 22-04-2016 VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.8E-42 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 SMART SM00267 243 410 2.0E-52 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 1.1E-7 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 SUPERFAMILY SSF55785 5 115 1.17E-9 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 Pfam PF13188 PAS domain 133 176 1.3E-5 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 SMART SM00091 8 74 0.0052 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 SMART SM00091 131 198 0.039 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 Pfam PF00563 EAL domain 427 661 5.1E-72 T 22-04-2016 IPR001633 EAL domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 SUPERFAMILY SSF141868 427 674 1.44E-83 T 22-04-2016 IPR001633 EAL domain VPUCM_RS03470 4bffa0de7adbff519855a14d74bac928 679 SMART SM00052 420 666 4.8E-106 T 22-04-2016 IPR001633 EAL domain VPUCM_RS10545 036100b036353460454c333a8cf661e3 338 PANTHER PTHR30518 1 335 4.0E-89 T 22-04-2016 VPUCM_RS10545 036100b036353460454c333a8cf661e3 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 336 3.9E-102 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VPUCM_RS10545 036100b036353460454c333a8cf661e3 338 Gene3D G3DSA:3.30.160.60 74 110 1.9E-15 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VPUCM_RS10545 036100b036353460454c333a8cf661e3 338 PANTHER PTHR30518:SF2 1 335 4.0E-89 T 22-04-2016 VPUCM_RS10545 036100b036353460454c333a8cf661e3 338 Gene3D G3DSA:3.30.160.60 302 337 2.2E-19 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VPUCM_RS10545 036100b036353460454c333a8cf661e3 338 Pfam PF02618 YceG-like family 43 328 1.6E-82 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VPUCM_RS16945 8f0e94b0b404e96ee82aeb422d7f3b6b 296 PANTHER PTHR21262 1 295 3.4E-142 T 22-04-2016 VPUCM_RS16945 8f0e94b0b404e96ee82aeb422d7f3b6b 296 SUPERFAMILY SSF81301 1 67 4.74E-7 T 22-04-2016 VPUCM_RS16945 8f0e94b0b404e96ee82aeb422d7f3b6b 296 Pfam PF02824 TGS domain 63 121 9.2E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VPUCM_RS16945 8f0e94b0b404e96ee82aeb422d7f3b6b 296 Gene3D G3DSA:3.10.20.30 62 122 2.1E-20 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS16945 8f0e94b0b404e96ee82aeb422d7f3b6b 296 PANTHER PTHR21262:SF0 1 295 3.4E-142 T 22-04-2016 VPUCM_RS16945 8f0e94b0b404e96ee82aeb422d7f3b6b 296 SUPERFAMILY SSF81271 50 122 4.8E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VPUCM_RS06290 1cd2480c7b1e6da41a2398fb2bc39459 131 Gene3D G3DSA:3.10.129.10 8 130 2.6E-41 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS06290 1cd2480c7b1e6da41a2398fb2bc39459 131 PANTHER PTHR11049 1 129 4.9E-66 T 22-04-2016 VPUCM_RS06290 1cd2480c7b1e6da41a2398fb2bc39459 131 PANTHER PTHR11049:SF5 1 129 4.9E-66 T 22-04-2016 VPUCM_RS06290 1cd2480c7b1e6da41a2398fb2bc39459 131 Pfam PF03061 Thioesterase superfamily 26 98 6.2E-20 T 22-04-2016 IPR006683 Thioesterase domain VPUCM_RS06290 1cd2480c7b1e6da41a2398fb2bc39459 131 SUPERFAMILY SSF54637 9 129 4.73E-38 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Gene3D G3DSA:1.10.287.130 274 343 7.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Pfam PF00072 Response regulator receiver domain 529 638 2.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SUPERFAMILY SSF55785 140 267 3.14E-25 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 1.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SMART SM00073 673 779 5.7E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PIRSF PIRSF003182 1 783 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PANTHER PTHR24423:SF476 153 684 0.0 T 22-04-2016 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PANTHER PTHR24423:SF476 20 95 0.0 T 22-04-2016 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SMART SM00387 394 510 1.3E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SUPERFAMILY SSF47384 270 347 2.16E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Gene3D G3DSA:3.30.450.20 142 267 2.1E-23 T 22-04-2016 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Gene3D G3DSA:1.10.287.970 1 89 3.1E-39 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Pfam PF08448 PAS fold 162 271 6.7E-19 T 22-04-2016 IPR013656 PAS fold-4 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Gene3D G3DSA:1.20.120.160 683 781 2.0E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SUPERFAMILY SSF55874 336 506 3.54E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 9.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 9.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 9.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 9.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SMART SM00388 282 347 9.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PANTHER PTHR24423 153 684 0.0 T 22-04-2016 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 PANTHER PTHR24423 20 95 0.0 T 22-04-2016 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Pfam PF01627 Hpt domain 694 765 6.3E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 6.5E-18 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SMART SM00091 155 221 9.2E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SMART SM00448 527 638 2.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Gene3D G3DSA:3.40.50.2300 522 642 1.7E-28 T 22-04-2016 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SUPERFAMILY SSF52172 527 642 2.7E-25 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 SUPERFAMILY SSF47226 667 781 2.88E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS02405 b7c2f2b0ec8ae380a991da237b45d4e3 783 Gene3D G3DSA:3.30.565.10 355 506 1.0E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Gene3D G3DSA:3.30.420.40 193 229 1.6E-34 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Gene3D G3DSA:3.30.420.40 319 361 1.6E-34 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 SUPERFAMILY SSF100920 384 540 3.66E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Pfam PF00012 Hsp70 protein 5 598 4.0E-263 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Gene3D G3DSA:3.90.640.10 230 313 1.0E-31 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Gene3D G3DSA:3.30.420.40 4 52 3.5E-64 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Gene3D G3DSA:3.30.420.40 119 192 3.5E-64 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PANTHER PTHR19375 2 626 0.0 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 627 36.621 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Gene3D G3DSA:3.30.30.30 53 108 6.3E-29 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 SUPERFAMILY SSF53067 4 184 5.89E-67 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Gene3D G3DSA:2.60.34.10 390 531 9.3E-70 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 Gene3D G3DSA:1.20.1270.10 532 598 1.6E-19 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 SUPERFAMILY SSF53067 187 382 7.41E-68 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PANTHER PTHR19375:SF173 2 626 0.0 T 22-04-2016 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 1.7E-288 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS03910 de2c22cba593c3c3fce439268f72afb5 630 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.6E-82 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS13965 1fa5018afacf5cb0a109c14160d8bbb9 164 Gene3D G3DSA:2.60.450.10 21 156 4.8E-36 T 22-04-2016 VPUCM_RS13965 1fa5018afacf5cb0a109c14160d8bbb9 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.2E-47 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VPUCM_RS13965 1fa5018afacf5cb0a109c14160d8bbb9 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.676 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VPUCM_RS13965 1fa5018afacf5cb0a109c14160d8bbb9 164 Pfam PF03968 OstA-like protein 30 141 6.9E-30 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VPUCM_RS13965 1fa5018afacf5cb0a109c14160d8bbb9 164 PANTHER PTHR36504 1 162 1.3E-42 T 22-04-2016 VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 SUPERFAMILY SSF55785 126 239 1.29E-15 T 22-04-2016 IPR000014 PAS domain VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 Gene3D G3DSA:3.20.20.450 420 661 5.9E-71 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 Pfam PF00989 PAS fold 132 238 2.3E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 240 1.8E-10 T 22-04-2016 IPR000014 PAS domain VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 PANTHER PTHR33121:SF10 334 696 6.7E-76 T 22-04-2016 VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 Gene3D G3DSA:3.10.580.10 689 816 8.0E-8 T 22-04-2016 VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 PANTHER PTHR33121 334 696 6.7E-76 T 22-04-2016 VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 SMART SM00052 417 663 7.9E-66 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 SUPERFAMILY SSF141868 424 661 6.15E-66 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 Pfam PF00563 EAL domain 426 657 5.0E-61 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 Gene3D G3DSA:3.30.450.20 128 239 5.1E-13 T 22-04-2016 VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 SMART SM00091 128 194 6.0E-6 T 22-04-2016 IPR000014 PAS domain VPUCM_RS06255 a54c3f7c97c7587dc4f4bc6f46d2bd91 818 SUPERFAMILY SSF54631 688 816 9.05E-8 T 22-04-2016 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 318 1.4E-66 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:3.30.930.10 74 270 1.1E-58 T 22-04-2016 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF46785 7 62 4.31E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 PANTHER PTHR12835 1 318 8.5E-83 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:2.30.30.100 272 319 2.1E-20 T 22-04-2016 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF55681 72 269 1.21E-60 T 22-04-2016 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 208 4.8E-20 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:1.10.10.10 4 64 4.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF08279 HTH domain 9 60 2.5E-12 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 3.5E-11 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF50037 272 318 1.05E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal VPUCM_RS15285 4185d78b54bfa78014ef7701058c2c14 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.586 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VPUCM_RS00270 9e7e2b6a121b247e868b26a58ed5e738 325 Gene3D G3DSA:1.10.3720.10 88 313 3.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00270 9e7e2b6a121b247e868b26a58ed5e738 325 PANTHER PTHR30465:SF47 1 320 6.3E-208 T 22-04-2016 VPUCM_RS00270 9e7e2b6a121b247e868b26a58ed5e738 325 PANTHER PTHR30465 1 320 6.3E-208 T 22-04-2016 VPUCM_RS00270 9e7e2b6a121b247e868b26a58ed5e738 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 7.6E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00270 9e7e2b6a121b247e868b26a58ed5e738 325 SUPERFAMILY SSF161098 90 302 9.48E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS11300 c17b20fa973fb4cd26b12f93e7bf3ad9 202 PANTHER PTHR38687 2 202 3.4E-47 T 22-04-2016 VPUCM_RS11300 c17b20fa973fb4cd26b12f93e7bf3ad9 202 Pfam PF05036 Sporulation related domain 126 194 7.5E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS11300 c17b20fa973fb4cd26b12f93e7bf3ad9 202 PANTHER PTHR38687:SF1 2 202 3.4E-47 T 22-04-2016 VPUCM_RS11300 c17b20fa973fb4cd26b12f93e7bf3ad9 202 Gene3D G3DSA:3.30.70.1070 120 199 5.5E-22 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS11300 c17b20fa973fb4cd26b12f93e7bf3ad9 202 SUPERFAMILY SSF110997 125 198 2.62E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 SUPERFAMILY SSF50998 31 375 1.13E-81 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 Pfam PF13360 PQQ-like domain 76 310 4.5E-51 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 3.2E-143 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.871 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 PANTHER PTHR32303:SF8 1 365 7.1E-147 T 22-04-2016 VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 SMART SM00564 191 223 330.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 SMART SM00564 280 312 42.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 SMART SM00564 147 178 0.25 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 SMART SM00564 322 353 0.0084 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 SMART SM00564 243 274 80.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 SMART SM00564 107 138 0.063 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 SMART SM00564 63 94 9.8E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 PANTHER PTHR32303 1 365 7.1E-147 T 22-04-2016 VPUCM_RS03015 d7a9333edc484cdd98506c05b2ca63ba 386 Gene3D G3DSA:2.140.10.10 8 379 5.4E-73 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain VPUCM_RS01590 ead6bbcf03e3b1fe70139ea92a55e7d8 190 Gene3D G3DSA:2.60.120.10 12 152 4.3E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS01590 ead6bbcf03e3b1fe70139ea92a55e7d8 190 SUPERFAMILY SSF51206 15 132 1.31E-21 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS01590 ead6bbcf03e3b1fe70139ea92a55e7d8 190 PANTHER PTHR24567 15 185 9.2E-20 T 22-04-2016 VPUCM_RS01590 ead6bbcf03e3b1fe70139ea92a55e7d8 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 1.2E-8 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS01590 ead6bbcf03e3b1fe70139ea92a55e7d8 190 PANTHER PTHR24567:SF33 15 185 9.2E-20 T 22-04-2016 VPUCM_RS12320 a41227fd9f6c259085e05da6c3c6326a 196 Gene3D G3DSA:3.40.50.1470 3 193 4.0E-72 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VPUCM_RS12320 a41227fd9f6c259085e05da6c3c6326a 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 2.9E-53 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VPUCM_RS12320 a41227fd9f6c259085e05da6c3c6326a 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VPUCM_RS12320 a41227fd9f6c259085e05da6c3c6326a 196 SUPERFAMILY SSF53178 5 194 1.57E-69 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VPUCM_RS12320 a41227fd9f6c259085e05da6c3c6326a 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VPUCM_RS12320 a41227fd9f6c259085e05da6c3c6326a 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.725 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VPUCM_RS12320 a41227fd9f6c259085e05da6c3c6326a 196 PANTHER PTHR17224 5 195 5.1E-85 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VPUCM_RS12320 a41227fd9f6c259085e05da6c3c6326a 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 8.9E-69 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VPUCM_RS08475 c31b6ecf396997f5f84ab85a76007473 90 Pfam PF00708 Acylphosphatase 6 89 2.9E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VPUCM_RS08475 c31b6ecf396997f5f84ab85a76007473 90 SUPERFAMILY SSF54975 4 89 1.16E-28 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VPUCM_RS08475 c31b6ecf396997f5f84ab85a76007473 90 Gene3D G3DSA:3.30.70.100 5 89 7.5E-31 T 22-04-2016 VPUCM_RS08475 c31b6ecf396997f5f84ab85a76007473 90 PANTHER PTHR10029 4 90 1.6E-24 T 22-04-2016 VPUCM_RS08475 c31b6ecf396997f5f84ab85a76007473 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VPUCM_RS08475 c31b6ecf396997f5f84ab85a76007473 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PANTHER PTHR11958:SF44 1 418 5.7E-126 T 22-04-2016 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 1.1E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 Gene3D G3DSA:1.10.3860.10 3 408 3.0E-109 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 SUPERFAMILY SSF118215 5 406 2.62E-105 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PANTHER PTHR11958 1 418 5.7E-126 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03295 1769448a30716f6e5ab1cd9e3f06d7b1 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.9E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 SUPERFAMILY SSF53850 96 293 6.15E-24 T 22-04-2016 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.5E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 PANTHER PTHR30537 5 292 3.9E-63 T 22-04-2016 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 Gene3D G3DSA:1.10.10.10 9 87 2.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 Pfam PF03466 LysR substrate binding domain 97 292 1.2E-19 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 Gene3D G3DSA:3.40.190.10 179 260 7.5E-22 T 22-04-2016 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 SUPERFAMILY SSF46785 4 117 1.57E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 Gene3D G3DSA:3.40.190.10 99 178 1.2E-18 T 22-04-2016 VPUCM_RS03200 b41b5fdbe3aac111a631571ceeff866f 296 PANTHER PTHR30537:SF26 5 292 3.9E-63 T 22-04-2016 VPUCM_RS04925 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 2.4E-26 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04925 a126cb83962c41f5bc876fbe0494389d 399 PANTHER PTHR10590 3 396 4.4E-184 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04925 a126cb83962c41f5bc876fbe0494389d 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 6.4E-134 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04925 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF07670 Nucleoside recognition 87 182 1.9E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04925 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 4.5E-71 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04605 08ceeffccd9f5f2b6393d414a9e8d41e 104 SUPERFAMILY SSF158452 1 103 9.42E-38 T 22-04-2016 IPR023376 YqcC-like domain VPUCM_RS04605 08ceeffccd9f5f2b6393d414a9e8d41e 104 Gene3D G3DSA:1.20.1440.40 1 104 1.9E-38 T 22-04-2016 IPR023376 YqcC-like domain VPUCM_RS04605 08ceeffccd9f5f2b6393d414a9e8d41e 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 5.5E-34 T 22-04-2016 IPR023376 YqcC-like domain VPUCM_RS04605 08ceeffccd9f5f2b6393d414a9e8d41e 104 PIRSF PIRSF006257 1 104 2.6E-43 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 VPUCM_RS04605 08ceeffccd9f5f2b6393d414a9e8d41e 104 PANTHER PTHR39586 2 103 4.7E-35 T 22-04-2016 VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 PIRSF PIRSF002936 1 302 3.4E-156 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 PANTHER PTHR23293 245 302 6.2E-97 T 22-04-2016 VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 PANTHER PTHR23293 178 211 6.2E-97 T 22-04-2016 VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 PANTHER PTHR23293 1 158 6.2E-97 T 22-04-2016 VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.4E-164 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 SUPERFAMILY SSF52402 6 209 2.19E-74 T 22-04-2016 VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.5E-64 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 Gene3D G3DSA:3.40.50.620 244 253 5.9E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 Gene3D G3DSA:3.40.50.620 3 210 5.9E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS01605 55b3255bc5cbd7397ab87761b449ce96 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.245 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PANTHER PTHR12428 168 538 6.4E-140 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PANTHER PTHR12428:SF14 168 538 6.4E-140 T 22-04-2016 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 6.4E-111 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 Pfam PF14849 YidC periplasmic domain 65 339 1.2E-83 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 Pfam PF02096 60Kd inner membrane protein 351 530 1.3E-63 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 1.0E-73 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 1.6E-99 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VPUCM_RS00015 a332ca081c95c09a7ab4525216123df2 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 26.034 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 SUPERFAMILY SSF63418 1 96 2.09E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 SUPERFAMILY SSF53623 100 313 1.57E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 SUPERFAMILY SSF53244 316 450 1.28E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.874 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 PANTHER PTHR23135 12 452 6.4E-152 T 22-04-2016 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 Gene3D G3DSA:3.40.1190.10 82 311 1.7E-70 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 Pfam PF08245 Mur ligase middle domain 105 295 5.0E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 7.2E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 PANTHER PTHR23135:SF3 12 452 6.4E-152 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 5.0E-142 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 Gene3D G3DSA:3.40.1390.10 1 80 3.9E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 Pfam PF01225 Mur ligase family, catalytic domain 24 91 1.0E-7 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02240 f80745c469ddc9c565b2299b243803d4 454 Gene3D G3DSA:3.90.190.20 316 452 1.4E-39 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 PANTHER PTHR10362:SF7 4 494 3.8E-250 T 22-04-2016 VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 Gene3D G3DSA:1.20.200.10 198 495 3.3E-127 T 22-04-2016 VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 PANTHER PTHR10362 4 494 3.8E-250 T 22-04-2016 VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 Gene3D G3DSA:1.10.275.10 4 197 1.0E-74 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.232 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 1.3E-214 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 SUPERFAMILY SSF48557 5 503 1.81E-192 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 Pfam PF00221 Aromatic amino acid lyase 12 470 3.0E-188 T 22-04-2016 IPR001106 Aromatic amino acid lyase VPUCM_RS09660 595ad9c8579692cb178b1940b5b83f4d 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.0E-179 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF47446 329 430 7.19E-38 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02978 Signal peptide binding domain 329 427 4.1E-33 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00962 100 296 7.1E-115 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.20.120.140 2 89 6.0E-36 T 22-04-2016 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00382 99 247 1.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:3.40.50.300 93 297 4.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00963 1 86 5.3E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF52540 42 353 1.38E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 PANTHER PTHR11564 1 435 1.2E-273 T 22-04-2016 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.0E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 PANTHER PTHR11564:SF7 1 435 1.2E-273 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.10.260.30 329 432 3.3E-41 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.4E-73 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS13085 3333ccf35fe09cb61f2d5f60c84c8761 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 4.6E-120 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 Gene3D G3DSA:3.40.140.20 378 520 9.4E-61 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 PANTHER PTHR11692:SF2 5 530 0.0 T 22-04-2016 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.949 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 Gene3D G3DSA:3.40.140.20 254 373 2.9E-50 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 Pfam PF02142 MGS-like domain 19 132 4.4E-31 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 PANTHER PTHR11692 5 530 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 SUPERFAMILY SSF53927 222 530 1.3E-130 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 2.5E-260 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 SMART SM00798 137 462 5.9E-219 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 SUPERFAMILY SSF52335 7 197 3.01E-72 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 PIRSF PIRSF000414 1 530 7.2E-229 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 SMART SM00851 19 132 1.9E-61 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VPUCM_RS15150 63121a434bca0d52bd3952d4324f61cb 530 Gene3D G3DSA:3.40.50.1380 5 190 3.0E-87 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VPUCM_RS16735 56332ce3ed9929871df0c0abf5ae8550 174 Gene3D G3DSA:2.40.50.250 145 174 3.9E-6 T 22-04-2016 VPUCM_RS16735 56332ce3ed9929871df0c0abf5ae8550 174 PANTHER PTHR23115:SF14 7 174 1.3E-66 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VPUCM_RS16735 56332ce3ed9929871df0c0abf5ae8550 174 PANTHER PTHR23115 7 174 1.3E-66 T 22-04-2016 VPUCM_RS16735 56332ce3ed9929871df0c0abf5ae8550 174 Pfam PF00679 Elongation factor G C-terminus 57 138 1.4E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS16735 56332ce3ed9929871df0c0abf5ae8550 174 SUPERFAMILY SSF54980 3 49 1.87E-10 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS16735 56332ce3ed9929871df0c0abf5ae8550 174 SUPERFAMILY SSF54980 60 173 3.02E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS16735 56332ce3ed9929871df0c0abf5ae8550 174 Gene3D G3DSA:3.30.70.240 62 140 9.2E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS16735 56332ce3ed9929871df0c0abf5ae8550 174 Gene3D G3DSA:3.30.70.870 3 61 1.2E-22 T 22-04-2016 VPUCM_RS09545 9bc3dfd971e309d15f2867570eef2f79 216 PANTHER PTHR10259 1 214 1.2E-95 T 22-04-2016 VPUCM_RS09545 9bc3dfd971e309d15f2867570eef2f79 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.822 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VPUCM_RS09545 9bc3dfd971e309d15f2867570eef2f79 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 9.7E-74 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 VPUCM_RS09545 9bc3dfd971e309d15f2867570eef2f79 216 PIRSF PIRSF023956 1 216 6.5E-73 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VPUCM_RS09545 9bc3dfd971e309d15f2867570eef2f79 216 Gene3D G3DSA:3.40.50.150 17 214 1.1E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS09545 9bc3dfd971e309d15f2867570eef2f79 216 PANTHER PTHR10259:SF16 1 214 1.2E-95 T 22-04-2016 VPUCM_RS09545 9bc3dfd971e309d15f2867570eef2f79 216 SUPERFAMILY SSF53335 3 214 3.07E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS09545 9bc3dfd971e309d15f2867570eef2f79 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 1.4E-78 T 22-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VPUCM_RS09520 3c169d7d3a8a7a9d3c7a5d3b91494982 473 SMART SM00479 8 201 0.0046 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS09520 3c169d7d3a8a7a9d3c7a5d3b91494982 473 SUPERFAMILY SSF53098 7 471 4.69E-138 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS09520 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Gene3D G3DSA:3.30.420.10 2 197 6.0E-83 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS09520 3c169d7d3a8a7a9d3c7a5d3b91494982 473 PANTHER PTHR11046 3 472 6.6E-275 T 22-04-2016 VPUCM_RS09520 3c169d7d3a8a7a9d3c7a5d3b91494982 473 PIRSF PIRSF000977 1 473 2.7E-196 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VPUCM_RS09520 3c169d7d3a8a7a9d3c7a5d3b91494982 473 PANTHER PTHR11046:SF2 3 472 6.6E-275 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VPUCM_RS09520 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Pfam PF08411 Exonuclease C-terminal 210 469 1.1E-103 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 VPUCM_RS09520 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Pfam PF00929 Exonuclease 11 190 3.1E-23 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 1.5E-92 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 SUPERFAMILY SSF55120 91 307 1.6E-63 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 Pfam PF00849 RNA pseudouridylate synthase 102 247 5.4E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 PANTHER PTHR11079 4 313 5.7E-153 T 22-04-2016 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 Gene3D G3DSA:3.10.290.10 20 68 9.6E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 Pfam PF01479 S4 domain 20 66 2.8E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 SUPERFAMILY SSF55174 19 71 3.79E-9 T 22-04-2016 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 PANTHER PTHR11079:SF84 4 313 5.7E-153 T 22-04-2016 VPUCM_RS10600 6a280db555cac47a6d5e8c896eee6731 315 SMART SM00363 20 77 1.6E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS06225 19d71eeaffcc14b119366118c7b5552c 298 PIRSF PIRSF006278 2 296 1.2E-23 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VPUCM_RS06225 19d71eeaffcc14b119366118c7b5552c 298 SUPERFAMILY SSF53686 9 295 1.2E-56 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS06225 19d71eeaffcc14b119366118c7b5552c 298 Gene3D G3DSA:3.40.50.1100 129 293 8.4E-16 T 22-04-2016 VPUCM_RS06225 19d71eeaffcc14b119366118c7b5552c 298 Gene3D G3DSA:3.40.50.1100 33 128 6.4E-8 T 22-04-2016 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PANTHER PTHR13697 2 306 1.6E-133 T 22-04-2016 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 SUPERFAMILY SSF53784 3 310 4.45E-112 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 Gene3D G3DSA:3.40.50.450 2 215 9.9E-75 T 22-04-2016 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.319 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PANTHER PTHR13697:SF4 2 306 1.6E-133 T 22-04-2016 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PIRSF PIRSF000532 1 320 1.0E-126 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 Pfam PF00365 Phosphofructokinase 4 276 2.6E-108 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.1E-129 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS14945 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 9.4E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 Gene3D G3DSA:1.10.10.10 9 84 2.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 Gene3D G3DSA:3.40.190.10 93 201 3.6E-23 T 22-04-2016 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 SUPERFAMILY SSF53850 93 303 5.61E-24 T 22-04-2016 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 Pfam PF03466 LysR substrate binding domain 93 299 6.9E-22 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 4.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 PANTHER PTHR30537:SF8 1 303 2.2E-86 T 22-04-2016 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 PANTHER PTHR30537 1 303 2.2E-86 T 22-04-2016 VPUCM_RS03150 82d03b1c7e2e3f73b02962b356a68c2b 306 SUPERFAMILY SSF46785 9 111 2.33E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13910 bc48cebb66062b31e65e1383449dbe2f 241 SUPERFAMILY SSF69593 4 235 7.32E-57 T 22-04-2016 VPUCM_RS13910 bc48cebb66062b31e65e1383449dbe2f 241 Gene3D G3DSA:3.40.1130.10 44 210 1.9E-17 T 22-04-2016 VPUCM_RS13910 bc48cebb66062b31e65e1383449dbe2f 241 PANTHER PTHR10434:SF20 1 241 1.8E-153 T 22-04-2016 VPUCM_RS13910 bc48cebb66062b31e65e1383449dbe2f 241 SMART SM00563 67 182 6.6E-40 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS13910 bc48cebb66062b31e65e1383449dbe2f 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.4E-44 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 VPUCM_RS13910 bc48cebb66062b31e65e1383449dbe2f 241 PANTHER PTHR10434 1 241 1.8E-153 T 22-04-2016 VPUCM_RS13910 bc48cebb66062b31e65e1383449dbe2f 241 Pfam PF01553 Acyltransferase 58 180 6.5E-32 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 Gene3D G3DSA:3.40.50.620 1 176 8.1E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 SUPERFAMILY SSF52374 1 280 2.82E-106 T 22-04-2016 VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 Gene3D G3DSA:3.30.1300.10 177 288 9.6E-27 T 22-04-2016 VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.105 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 PANTHER PTHR21299:SF1 1 294 2.1E-134 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.9E-100 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 8.7E-103 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 63 8.9E-9 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VPUCM_RS12960 816de773b3f832cd8e35ce1177581bf3 301 PANTHER PTHR21299 1 294 2.1E-134 T 22-04-2016 VPUCM_RS15040 207e57bce0a90ef89fd59d34f2e1a39c 396 Gene3D G3DSA:1.20.1250.20 13 184 3.0E-15 T 22-04-2016 VPUCM_RS15040 207e57bce0a90ef89fd59d34f2e1a39c 396 SUPERFAMILY SSF103473 8 373 1.57E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS15040 207e57bce0a90ef89fd59d34f2e1a39c 396 Pfam PF12832 MFS_1 like family 13 361 3.6E-39 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain VPUCM_RS15040 207e57bce0a90ef89fd59d34f2e1a39c 396 PANTHER PTHR23522 1 396 3.4E-138 T 22-04-2016 VPUCM_RS15040 207e57bce0a90ef89fd59d34f2e1a39c 396 PIRSF PIRSF004925 1 385 9.3E-104 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter VPUCM_RS15040 207e57bce0a90ef89fd59d34f2e1a39c 396 PANTHER PTHR23522:SF3 1 396 3.4E-138 T 22-04-2016 VPUCM_RS15040 207e57bce0a90ef89fd59d34f2e1a39c 396 Gene3D G3DSA:1.20.1250.20 199 374 5.1E-19 T 22-04-2016 VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 SUPERFAMILY SSF55073 153 306 7.45E-19 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 SMART SM00091 22 88 0.001 T 22-04-2016 IPR000014 PAS domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 SUPERFAMILY SSF141868 319 562 7.85E-74 T 22-04-2016 IPR001633 EAL domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 SMART SM00267 135 304 1.4E-7 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 1.9E-13 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 Gene3D G3DSA:3.30.70.270 147 310 3.5E-19 T 22-04-2016 VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 SMART SM00086 95 135 4.9E-4 T 22-04-2016 IPR001610 PAC motif VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 139 1.2E-12 T 22-04-2016 IPR000014 PAS domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 Gene3D G3DSA:3.30.450.20 18 133 1.1E-18 T 22-04-2016 VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 PANTHER PTHR33121 274 564 4.2E-62 T 22-04-2016 VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 Gene3D G3DSA:3.20.20.450 318 561 2.0E-76 T 22-04-2016 IPR001633 EAL domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 SUPERFAMILY SSF55785 27 137 2.44E-18 T 22-04-2016 IPR000014 PAS domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 PANTHER PTHR33121:SF13 274 564 4.2E-62 T 22-04-2016 VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 SMART SM00052 314 560 1.9E-68 T 22-04-2016 IPR001633 EAL domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 Pfam PF00563 EAL domain 322 555 4.6E-64 T 22-04-2016 IPR001633 EAL domain VPUCM_RS07690 7fd099d1a366b39a5b9f14e4d85efe7d 568 Pfam PF08447 PAS fold 45 114 2.0E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 VPUCM_RS11250 64c2fd2fad0ef404856ca911a187fa18 109 PIRSF PIRSF004555 3 109 5.6E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VPUCM_RS11250 64c2fd2fad0ef404856ca911a187fa18 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.6E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VPUCM_RS11250 64c2fd2fad0ef404856ca911a187fa18 109 SUPERFAMILY SSF82607 11 103 1.01E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VPUCM_RS11250 64c2fd2fad0ef404856ca911a187fa18 109 Gene3D G3DSA:3.30.1310.10 1 109 1.5E-51 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VPUCM_RS11250 64c2fd2fad0ef404856ca911a187fa18 109 PANTHER PTHR33449:SF1 1 109 1.7E-54 T 22-04-2016 VPUCM_RS11250 64c2fd2fad0ef404856ca911a187fa18 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.4E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VPUCM_RS11250 64c2fd2fad0ef404856ca911a187fa18 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.43 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VPUCM_RS11250 64c2fd2fad0ef404856ca911a187fa18 109 PANTHER PTHR33449 1 109 1.7E-54 T 22-04-2016 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 PANTHER PTHR11451 3 219 3.0E-109 T 22-04-2016 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 40.04 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 SUPERFAMILY SSF52374 4 280 7.11E-84 T 22-04-2016 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 3.9E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 PANTHER PTHR11451:SF35 3 219 3.0E-109 T 22-04-2016 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 124 265 8.6E-17 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 109 6.8E-27 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 3.5E-112 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 Gene3D G3DSA:3.40.50.620 156 285 9.0E-18 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12940 920706f2dbd4b88fc298a788eed61395 294 Gene3D G3DSA:3.40.50.620 3 142 1.7E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 Gene3D G3DSA:3.40.50.300 8 263 1.2E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 SMART SM00382 46 239 1.8E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 1.2E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 9.2E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 PANTHER PTHR24220 10 326 2.0E-193 T 22-04-2016 VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 Pfam PF00005 ABC transporter 38 189 1.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 PANTHER PTHR24220:SF544 10 326 2.0E-193 T 22-04-2016 VPUCM_RS05690 2fe9bbd47a92d5e40a2a54e0bad15738 330 SUPERFAMILY SSF52540 11 261 2.4E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 4.1E-106 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 SUPERFAMILY SSF56808 6 225 1.96E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.40.50.790 69 159 8.0E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 PIRSF PIRSF002155 1 227 4.9E-79 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.30.190.20 18 68 1.5E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.30.190.20 161 225 1.5E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 PANTHER PTHR23105 19 232 2.1E-81 T 22-04-2016 VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.2E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.018 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VPUCM_RS15235 af7841816b85fbe93c955c9bc0544a50 233 PANTHER PTHR23105:SF5 19 232 2.1E-81 T 22-04-2016 VPUCM_RS07270 d1e843f31b119e9c34563c7811035878 125 SUPERFAMILY SSF82784 9 120 1.57E-25 T 22-04-2016 IPR003718 OsmC/Ohr family VPUCM_RS07270 d1e843f31b119e9c34563c7811035878 125 Gene3D G3DSA:3.30.300.20 25 120 4.9E-23 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VPUCM_RS07270 d1e843f31b119e9c34563c7811035878 125 Pfam PF02566 OsmC-like protein 20 116 2.3E-13 T 22-04-2016 IPR003718 OsmC/Ohr family VPUCM_RS07270 d1e843f31b119e9c34563c7811035878 125 PANTHER PTHR34352 20 124 1.7E-20 T 22-04-2016 VPUCM_RS07335 7dbd0d398cdaa3c43de3e7fe5c47add6 145 Gene3D G3DSA:3.40.630.30 1 133 1.3E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07335 7dbd0d398cdaa3c43de3e7fe5c47add6 145 PANTHER PTHR23091 1 133 2.3E-13 T 22-04-2016 VPUCM_RS07335 7dbd0d398cdaa3c43de3e7fe5c47add6 145 SUPERFAMILY SSF55729 2 133 5.23E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07335 7dbd0d398cdaa3c43de3e7fe5c47add6 145 Pfam PF00583 Acetyltransferase (GNAT) family 55 130 1.3E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 SUPERFAMILY SSF58104 248 557 1.18E-73 T 22-04-2016 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 SMART SM01049 44 133 9.5E-32 T 22-04-2016 IPR033480 Single Cache domain 2 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 SMART SM00283 295 556 7.9E-59 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 SMART SM00304 226 280 1.8E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 PANTHER PTHR32089:SF55 66 557 6.2E-197 T 22-04-2016 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 Pfam PF00672 HAMP domain 207 276 5.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 Gene3D G3DSA:3.30.450.20 42 185 2.7E-47 T 22-04-2016 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 Pfam PF17200 Single Cache domain 2 47 189 1.8E-38 T 22-04-2016 IPR033480 Single Cache domain 2 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 PANTHER PTHR32089 66 557 6.2E-197 T 22-04-2016 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 555 5.0E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS00940 aca00484bb5bbcb44d5276c89954e6f1 557 Gene3D G3DSA:1.10.287.950 314 527 5.2E-56 T 22-04-2016 VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 2.1E-86 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.4E-56 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 PANTHER PTHR13767:SF2 1 308 2.1E-130 T 22-04-2016 VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 7.4E-20 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 9.7E-25 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 Gene3D G3DSA:2.30.130.10 249 312 3.1E-26 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 SUPERFAMILY SSF88697 250 310 6.96E-15 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.982 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 PANTHER PTHR13767 1 308 2.1E-130 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS03430 5ce9ae5cb53cfa1f159f96ec44bcb143 314 SUPERFAMILY SSF55120 9 247 5.76E-84 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 SUPERFAMILY SSF48179 191 287 4.42E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.7E-27 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 2.1E-31 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 Gene3D G3DSA:1.10.1040.10 198 284 1.4E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 PANTHER PTHR11374:SF17 1 372 1.3E-231 T 22-04-2016 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 SUPERFAMILY SSF51735 1 194 2.74E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 Gene3D G3DSA:3.40.50.720 285 388 9.2E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 Gene3D G3DSA:3.40.50.720 1 197 2.7E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 PANTHER PTHR11374 1 372 1.3E-231 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 PIRSF PIRSF500134 1 343 1.9E-118 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.2E-104 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 SUPERFAMILY SSF52413 283 387 1.11E-27 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 PIRSF PIRSF000124 1 388 1.6E-135 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.1E-8 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VPUCM_RS01340 77db226480ef13623bb019a21481fbe0 388 SMART SM00984 300 387 1.4E-14 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 108 123 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 Pfam PF02954 Bacterial regulatory protein, Fis family 273 313 4.2E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 SMART SM00382 42 186 3.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 232 241 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 Gene3D G3DSA:1.10.8.60 195 264 9.8E-21 T 22-04-2016 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 Gene3D G3DSA:3.40.50.300 21 194 2.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 Gene3D G3DSA:1.10.10.60 265 316 2.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 279 296 7.8E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 316 7.8E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 SUPERFAMILY SSF52540 22 260 8.81E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 PANTHER PTHR32071 16 317 5.9E-136 T 22-04-2016 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 Pfam PF00158 Sigma-54 interaction domain 22 188 1.0E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS06115 61f43fa2f0908f4b23d8f7a937c26c5a 317 SUPERFAMILY SSF46689 232 316 2.82E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS08640 03b0095b4c4f9624d0cbaa3ad07875b0 605 SUPERFAMILY SSF103388 348 604 2.22E-92 T 22-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 VPUCM_RS08640 03b0095b4c4f9624d0cbaa3ad07875b0 605 Pfam PF04792 V antigen (LcrV) protein 391 605 3.6E-32 T 22-04-2016 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 VPUCM_RS09310 dec5cba1e8c403380d8a6efe6a93045b 376 Pfam PF04209 homogentisate 1,2-dioxygenase 87 374 8.5E-22 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 VPUCM_RS09310 dec5cba1e8c403380d8a6efe6a93045b 376 SUPERFAMILY SSF51182 78 374 2.06E-91 T 22-04-2016 IPR011051 RmlC-like cupin domain VPUCM_RS09310 dec5cba1e8c403380d8a6efe6a93045b 376 Gene3D G3DSA:2.60.120.10 67 165 2.4E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS09310 dec5cba1e8c403380d8a6efe6a93045b 376 Gene3D G3DSA:2.60.120.10 216 352 8.9E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS09310 dec5cba1e8c403380d8a6efe6a93045b 376 PANTHER PTHR11056 92 374 4.2E-70 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 Gene3D G3DSA:3.40.50.970 335 495 1.2E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 5.0E-303 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 PANTHER PTHR11624:SF20 241 621 0.0 T 22-04-2016 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.954 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 1.4E-36 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 SUPERFAMILY SSF52518 317 504 1.3E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 Gene3D G3DSA:3.40.50.970 242 334 6.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 Gene3D G3DSA:3.40.50.970 26 201 6.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.6E-119 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 SUPERFAMILY SSF52922 492 619 2.75E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 Gene3D G3DSA:3.40.50.920 496 619 2.3E-38 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 PANTHER PTHR11624 241 621 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 SUPERFAMILY SSF52518 243 381 2.66E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 SUPERFAMILY SSF52518 9 199 2.66E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.2E-28 T 22-04-2016 IPR033248 Transketolase, C-terminal domain VPUCM_RS12675 e8dbf777e0da9a16a7cc8779079975f7 621 SMART SM00861 319 483 4.1E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 SUPERFAMILY SSF52172 4 135 1.42E-34 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 SUPERFAMILY SSF46894 141 211 2.01E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 2.2E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 SMART SM00421 148 205 4.0E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 Pfam PF00072 Response regulator receiver domain 7 119 8.9E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 Gene3D G3DSA:1.10.10.10 125 211 6.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 PANTHER PTHR26402 5 210 1.9E-77 T 22-04-2016 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 PANTHER PTHR26402:SF151 5 210 1.9E-77 T 22-04-2016 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 SMART SM00448 5 118 2.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06615 945d2424a30ee6e538df68089c2968d7 212 Gene3D G3DSA:3.40.50.2300 2 124 2.0E-35 T 22-04-2016 VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 PANTHER PTHR23152 5 941 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 8.4E-67 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.1E-13 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 SMART SM00861 594 787 4.0E-64 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Pfam PF00676 Dehydrogenase E1 component 221 514 2.0E-48 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 SUPERFAMILY SSF52518 122 532 4.49E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Gene3D G3DSA:3.40.50.970 163 549 9.8E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 PANTHER PTHR23152:SF4 5 941 0.0 T 22-04-2016 VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.1E-55 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 SUPERFAMILY SSF52518 577 794 3.62E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Gene3D G3DSA:3.40.50.970 592 793 1.4E-26 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS11795 482e02d1c5c9521a54c1af0bbd4ee1f0 941 PIRSF PIRSF000157 1 935 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 SUPERFAMILY SSF90123 7 320 5.49E-74 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 Pfam PF00005 ABC transporter 353 500 8.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 Pfam PF00664 ABC transporter transmembrane region 21 291 3.3E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 SUPERFAMILY SSF52540 340 571 2.41E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 PANTHER PTHR24221 1 579 1.3E-175 T 22-04-2016 VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 SMART SM00382 361 547 2.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 Gene3D G3DSA:3.40.50.300 344 565 3.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07765 5c62a618d23f1f618ccb4d41af0a6e51 579 Gene3D G3DSA:1.20.1560.10 7 319 4.6E-72 T 22-04-2016 VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 PANTHER PTHR13710 507 638 2.0E-156 T 22-04-2016 VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 PANTHER PTHR13710 1 345 2.0E-156 T 22-04-2016 VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 349 1.8E-112 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 SMART SM00490 245 326 4.7E-28 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 Gene3D G3DSA:3.40.50.300 200 335 7.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 Pfam PF16124 RecQ zinc-binding 512 559 1.4E-8 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 Gene3D G3DSA:3.40.50.300 4 190 5.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 SMART SM00487 15 211 1.8E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 PANTHER PTHR13710:SF81 507 638 2.0E-156 T 22-04-2016 VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 PANTHER PTHR13710:SF81 1 345 2.0E-156 T 22-04-2016 VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 22-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 Pfam PF00270 DEAD/DEAH box helicase 22 181 1.3E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 Pfam PF00271 Helicase conserved C-terminal domain 230 326 1.5E-17 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 Gene3D G3DSA:1.10.10.10 514 638 1.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04525 11d08b0d52d5e86459077fa007fc2cc4 641 SUPERFAMILY SSF52540 60 338 3.42E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 Gene3D G3DSA:3.40.47.10 1 260 3.0E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 3.3E-40 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 5.2E-28 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 SMART SM00825 Beta-ketoacyl synthase 5 377 2.4E-11 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 PANTHER PTHR11712 2 406 2.6E-111 T 22-04-2016 VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 SUPERFAMILY SSF53901 215 406 6.1E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 SUPERFAMILY SSF53901 2 252 2.3E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS04945 87467e1888f3b5bd311558badeaf50a3 407 Gene3D G3DSA:3.40.47.10 264 406 8.7E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 Gene3D G3DSA:1.10.287.990 20 82 1.6E-23 T 22-04-2016 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 PANTHER PTHR11404:SF8 1 194 7.5E-111 T 22-04-2016 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.6E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 PANTHER PTHR11404 1 194 7.5E-111 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 SUPERFAMILY SSF46609 1 84 5.24E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 SUPERFAMILY SSF54719 84 193 1.31E-43 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 5.9E-39 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS11025 49a07737907fb1a498e251002bcababa 194 PIRSF PIRSF000349 1 194 1.6E-84 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 1.8E-57 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 Gene3D G3DSA:1.10.1040.10 205 382 1.4E-47 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 Gene3D G3DSA:3.40.50.720 3 201 3.1E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 40.989 T 22-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 SUPERFAMILY SSF48179 205 382 9.18E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 PANTHER PTHR30524 1 382 3.1E-198 T 22-04-2016 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.5E-23 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 SUPERFAMILY SSF51735 3 203 3.23E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 VPUCM_RS01955 f55e2bed7386cacf42f3aed5b4fccf12 382 PANTHER PTHR30524:SF0 1 382 3.1E-198 T 22-04-2016 VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 SUPERFAMILY SSF51735 116 289 1.66E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 PANTHER PTHR11695 16 326 2.5E-165 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 PANTHER PTHR11695:SF13 16 326 2.5E-165 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 SUPERFAMILY SSF50129 2 145 5.33E-45 T 22-04-2016 IPR011032 GroES-like VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 Gene3D G3DSA:3.90.180.10 4 87 1.3E-9 T 22-04-2016 IPR011032 GroES-like VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.7E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.1E-139 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 Gene3D G3DSA:3.40.50.720 126 291 1.0E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 9.8E-11 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VPUCM_RS00125 d1a434040dab94dd71225b643f29601b 326 SMART SM00829 13 324 3.6E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VPUCM_RS02330 eb4d571e26eb17875273bc82e76cce2d 259 PANTHER PTHR30269:SF0 3 255 3.6E-101 T 22-04-2016 VPUCM_RS02330 eb4d571e26eb17875273bc82e76cce2d 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 1.9E-41 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS02330 eb4d571e26eb17875273bc82e76cce2d 259 PANTHER PTHR30269 3 255 3.6E-101 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS06020 1041d1373f70dba44b2bb34bce86fc05 268 PANTHER PTHR10108 23 191 2.8E-41 T 22-04-2016 VPUCM_RS06020 1041d1373f70dba44b2bb34bce86fc05 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 32.638 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VPUCM_RS06020 1041d1373f70dba44b2bb34bce86fc05 268 Gene3D G3DSA:3.40.50.150 40 265 7.6E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06020 1041d1373f70dba44b2bb34bce86fc05 268 PANTHER PTHR10108:SF855 23 191 2.8E-41 T 22-04-2016 VPUCM_RS06020 1041d1373f70dba44b2bb34bce86fc05 268 Pfam PF08241 Methyltransferase domain 58 148 1.5E-25 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VPUCM_RS06020 1041d1373f70dba44b2bb34bce86fc05 268 SUPERFAMILY SSF53335 20 207 1.26E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06020 1041d1373f70dba44b2bb34bce86fc05 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 266 4.2E-68 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 SUPERFAMILY SSF53901 14 293 1.46E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 PIRSF PIRSF000429 8 435 1.9E-118 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 3.2E-62 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 4.3E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 4.0E-267 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.118 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 PANTHER PTHR18919:SF5 9 435 2.6E-188 T 22-04-2016 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 SUPERFAMILY SSF53901 296 434 1.18E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 7.9E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 303 435 2.3E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 174 219 2.3E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 14 133 1.1E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 220 299 1.1E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11400 3c59fb7317280b84cb0f6ec3439d397f 435 PANTHER PTHR18919 9 435 2.6E-188 T 22-04-2016 VPUCM_RS11490 a546850871970878d725d96a1cc52695 259 Gene3D G3DSA:3.40.50.300 3 248 1.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11490 a546850871970878d725d96a1cc52695 259 PANTHER PTHR13696:SF69 1 251 1.7E-145 T 22-04-2016 VPUCM_RS11490 a546850871970878d725d96a1cc52695 259 SUPERFAMILY SSF52540 1 252 5.77E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11490 a546850871970878d725d96a1cc52695 259 PANTHER PTHR13696 1 251 1.7E-145 T 22-04-2016 VPUCM_RS11490 a546850871970878d725d96a1cc52695 259 Pfam PF13614 AAA domain 4 174 2.3E-50 T 22-04-2016 IPR025669 AAA domain VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 Pfam PF01467 Cytidylyltransferase-like 345 468 1.0E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.1E-61 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 SUPERFAMILY SSF53613 12 302 2.65E-60 T 22-04-2016 IPR029056 Ribokinase-like VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 Gene3D G3DSA:3.40.1190.20 13 310 5.9E-69 T 22-04-2016 IPR029056 Ribokinase-like VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 3.0E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 PANTHER PTHR10584 1 340 7.0E-144 T 22-04-2016 VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 5.2E-127 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 Gene3D G3DSA:3.40.50.620 340 461 7.2E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 PANTHER PTHR10584:SF159 1 340 7.0E-144 T 22-04-2016 VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 SUPERFAMILY SSF52374 340 471 3.66E-23 T 22-04-2016 VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VPUCM_RS02100 4e55eba1604f3cdef1e2dc4b0850db8b 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.991 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 PANTHER PTHR15184 1 434 4.3E-262 T 22-04-2016 VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 437 4.0E-175 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 Gene3D G3DSA:3.40.50.300 96 360 1.5E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 SMART SM00382 161 342 5.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 437 5.0E-200 T 22-04-2016 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 SUPERFAMILY SSF52540 95 364 2.17E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 3.9E-78 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 PANTHER PTHR15184:SF48 1 434 4.3E-262 T 22-04-2016 VPUCM_RS08685 ba7013e9ccba7b06e41ec0a6fcf4684d 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 1.5E-9 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS05540 90eb6efb7fa4db75801c052684d58e16 251 PANTHER PTHR21485 1 246 2.0E-126 T 22-04-2016 VPUCM_RS05540 90eb6efb7fa4db75801c052684d58e16 251 PANTHER PTHR21485:SF4 1 246 2.0E-126 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS05540 90eb6efb7fa4db75801c052684d58e16 251 SUPERFAMILY SSF53448 3 246 1.82E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS05540 90eb6efb7fa4db75801c052684d58e16 251 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.983 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS05540 90eb6efb7fa4db75801c052684d58e16 251 Gene3D G3DSA:3.90.550.10 1 249 5.7E-87 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS05540 90eb6efb7fa4db75801c052684d58e16 251 Pfam PF02348 Cytidylyltransferase 5 221 4.9E-66 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS05540 90eb6efb7fa4db75801c052684d58e16 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 8.5E-118 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 Pfam PF00403 Heavy-metal-associated domain 77 126 6.2E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 736 7.3E-86 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 SUPERFAMILY SSF81665 706 745 5.36E-20 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 SUPERFAMILY SSF81665 363 457 5.36E-20 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 SUPERFAMILY SSF81665 215 266 5.36E-20 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 3.2E-27 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 3.2E-27 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 3.2E-27 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 3.2E-27 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 3.2E-27 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 3.2E-27 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 522 7.4E-97 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 Gene3D G3DSA:3.40.1110.10 477 586 4.5E-18 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 SUPERFAMILY SSF56784 462 481 1.15E-50 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 SUPERFAMILY SSF56784 556 757 1.15E-50 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 Gene3D G3DSA:2.70.150.10 215 363 1.9E-26 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 SUPERFAMILY SSF55008 74 137 6.41E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PANTHER PTHR24093 65 760 6.3E-212 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 SUPERFAMILY SSF81653 265 362 4.97E-22 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 Gene3D G3DSA:3.30.70.100 74 139 1.6E-13 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PANTHER PTHR24093:SF126 65 760 6.3E-212 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 6.7E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 6.7E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 6.7E-8 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 2.0E-175 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 1.3E-38 T 22-04-2016 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 Pfam PF00122 E1-E2 ATPase 233 454 2.7E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 Gene3D G3DSA:3.40.50.1000 436 476 8.3E-42 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS05425 4adb105ebbad995fe5f7d8bf3188327e 768 Gene3D G3DSA:3.40.50.1000 587 723 8.3E-42 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS10915 fcda556ca29d3bd847cf348434e54a0e 232 SUPERFAMILY SSF55120 47 230 3.52E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10915 fcda556ca29d3bd847cf348434e54a0e 232 PANTHER PTHR21600:SF23 43 158 1.2E-88 T 22-04-2016 VPUCM_RS10915 fcda556ca29d3bd847cf348434e54a0e 232 PANTHER PTHR21600:SF23 175 230 1.2E-88 T 22-04-2016 VPUCM_RS10915 fcda556ca29d3bd847cf348434e54a0e 232 Pfam PF00849 RNA pseudouridylate synthase 57 201 1.6E-16 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10915 fcda556ca29d3bd847cf348434e54a0e 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 92 106 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VPUCM_RS10915 fcda556ca29d3bd847cf348434e54a0e 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 61 231 1.6E-58 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VPUCM_RS10915 fcda556ca29d3bd847cf348434e54a0e 232 PANTHER PTHR21600 43 158 1.2E-88 T 22-04-2016 VPUCM_RS10915 fcda556ca29d3bd847cf348434e54a0e 232 PANTHER PTHR21600 175 230 1.2E-88 T 22-04-2016 VPUCM_RS11925 6877e0860d13838591f43db09ef30ed6 292 Gene3D G3DSA:1.10.10.10 11 108 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11925 6877e0860d13838591f43db09ef30ed6 292 SUPERFAMILY SSF46894 9 107 1.9E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS11925 6877e0860d13838591f43db09ef30ed6 292 SMART SM00862 30 107 2.9E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS11925 6877e0860d13838591f43db09ef30ed6 292 PANTHER PTHR26402:SF483 9 262 4.8E-51 T 22-04-2016 VPUCM_RS11925 6877e0860d13838591f43db09ef30ed6 292 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 1.0E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS11925 6877e0860d13838591f43db09ef30ed6 292 PANTHER PTHR26402 9 262 4.8E-51 T 22-04-2016 VPUCM_RS08075 3a6908ee02918f43928ab35b7b97ee57 406 SUPERFAMILY SSF111352 17 384 2.35E-95 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VPUCM_RS08075 3a6908ee02918f43928ab35b7b97ee57 406 PANTHER PTHR11730 4 406 6.7E-118 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VPUCM_RS08075 3a6908ee02918f43928ab35b7b97ee57 406 Gene3D G3DSA:1.10.3430.10 15 384 1.2E-94 T 22-04-2016 IPR029020 Ammonium/urea transporter VPUCM_RS08075 3a6908ee02918f43928ab35b7b97ee57 406 PANTHER PTHR11730:SF6 4 406 6.7E-118 T 22-04-2016 VPUCM_RS08075 3a6908ee02918f43928ab35b7b97ee57 406 Pfam PF00909 Ammonium Transporter Family 23 399 5.5E-87 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 PANTHER PTHR23416:SF62 192 312 1.0E-94 T 22-04-2016 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 PANTHER PTHR23416:SF62 2 167 1.0E-94 T 22-04-2016 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 Pfam PF03102 NeuB family 22 289 5.2E-99 T 22-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 SUPERFAMILY SSF51269 295 356 9.42E-17 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 PANTHER PTHR23416 192 312 1.0E-94 T 22-04-2016 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 PANTHER PTHR23416 2 167 1.0E-94 T 22-04-2016 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 Gene3D G3DSA:3.90.1210.10 304 355 1.7E-16 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 Gene3D G3DSA:3.20.20.70 2 288 2.4E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 2 355 1.0E-148 T 22-04-2016 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 SUPERFAMILY SSF51569 184 313 6.72E-78 T 22-04-2016 VPUCM_RS01040 b4701400dd2fbc1778b049005abf7f0c 357 SUPERFAMILY SSF51569 2 157 6.72E-78 T 22-04-2016 VPUCM_RS03425 b56faf693d6bb4214387811b73ef11eb 131 Gene3D G3DSA:3.30.300.20 4 119 6.2E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VPUCM_RS03425 b56faf693d6bb4214387811b73ef11eb 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VPUCM_RS03425 b56faf693d6bb4214387811b73ef11eb 131 SUPERFAMILY SSF89919 2 105 4.32E-32 T 22-04-2016 IPR023799 Ribosome-binding factor A domain VPUCM_RS03425 b56faf693d6bb4214387811b73ef11eb 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 21.297 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VPUCM_RS03425 b56faf693d6bb4214387811b73ef11eb 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 1.8E-35 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VPUCM_RS03425 b56faf693d6bb4214387811b73ef11eb 131 PANTHER PTHR33515 1 131 1.8E-47 T 22-04-2016 VPUCM_RS03425 b56faf693d6bb4214387811b73ef11eb 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 2.0E-47 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VPUCM_RS03425 b56faf693d6bb4214387811b73ef11eb 131 Pfam PF02033 Ribosome-binding factor A 7 110 3.7E-30 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VPUCM_RS01305 148f446c5d294afd7c1e196324013a6b 287 Pfam PF13632 Glycosyl transferase family group 2 76 270 7.1E-9 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS01305 148f446c5d294afd7c1e196324013a6b 287 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 9 280 4.2E-60 T 22-04-2016 IPR006446 Rhamnosyltransferase KEGG: 00540+2.4.-.-|UniPathway: UPA00030 VPUCM_RS01305 148f446c5d294afd7c1e196324013a6b 287 SUPERFAMILY SSF53448 16 241 4.78E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01305 148f446c5d294afd7c1e196324013a6b 287 Gene3D G3DSA:3.90.550.10 48 238 3.5E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS02805 e83f80bf7eb0e0d62336ed8f693e6f96 84 Gene3D G3DSA:3.30.70.20 4 73 5.4E-17 T 22-04-2016 VPUCM_RS02805 e83f80bf7eb0e0d62336ed8f693e6f96 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS02805 e83f80bf7eb0e0d62336ed8f693e6f96 84 SUPERFAMILY SSF54862 4 72 5.59E-17 T 22-04-2016 VPUCM_RS02805 e83f80bf7eb0e0d62336ed8f693e6f96 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.5E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS02805 e83f80bf7eb0e0d62336ed8f693e6f96 84 PANTHER PTHR24960:SF38 1 81 3.5E-27 T 22-04-2016 VPUCM_RS02805 e83f80bf7eb0e0d62336ed8f693e6f96 84 PANTHER PTHR24960 1 81 3.5E-27 T 22-04-2016 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 PANTHER PTHR32294 1 1008 0.0 T 22-04-2016 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 1004 2.5E-9 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 PANTHER PTHR32294:SF4 1 1008 0.0 T 22-04-2016 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.199 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 4.0E-150 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 857 1.8E-155 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 Pfam PF14579 Helix-hairpin-helix motif 768 856 6.2E-15 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 Pfam PF02811 PHP domain 8 99 2.4E-8 T 22-04-2016 IPR004013 PHP domain GO:0003824 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 SMART SM00481 4 73 8.4E-6 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VPUCM_RS10480 e440cc25357c5ca7f08482740f289d58 1024 Gene3D G3DSA:2.40.50.140 921 998 1.9E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:3.40.50.300 4 211 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.796 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 PANTHER PTHR23115:SF151 1 392 2.6E-284 T 22-04-2016 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:2.40.30.10 212 298 2.3E-35 T 22-04-2016 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.1E-231 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 PANTHER PTHR23115 1 392 2.6E-284 T 22-04-2016 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.7E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.8E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:2.40.30.10 300 392 5.2E-47 T 22-04-2016 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF50465 298 393 1.61E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.8E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.0E-58 T 22-04-2016 VPUCM_RS15255 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF52540 6 219 5.86E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07115 8830a1d88cb97df5d809c9c94661b55e 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 5.8E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VPUCM_RS07115 8830a1d88cb97df5d809c9c94661b55e 119 Gene3D G3DSA:3.10.180.10 7 116 2.0E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS07115 8830a1d88cb97df5d809c9c94661b55e 119 PANTHER PTHR33993 1 119 6.1E-63 T 22-04-2016 VPUCM_RS07115 8830a1d88cb97df5d809c9c94661b55e 119 SUPERFAMILY SSF54593 6 117 2.89E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS07115 8830a1d88cb97df5d809c9c94661b55e 119 PANTHER PTHR33993:SF1 1 119 6.1E-63 T 22-04-2016 VPUCM_RS11745 a52efa215b8e67ed09775c5dbe6423cc 190 Gene3D G3DSA:3.40.50.360 3 188 3.9E-66 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS11745 a52efa215b8e67ed09775c5dbe6423cc 190 Pfam PF03358 NADPH-dependent FMN reductase 12 135 4.1E-12 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VPUCM_RS11745 a52efa215b8e67ed09775c5dbe6423cc 190 SUPERFAMILY SSF52218 4 187 1.31E-55 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS11745 a52efa215b8e67ed09775c5dbe6423cc 190 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VPUCM_RS11745 a52efa215b8e67ed09775c5dbe6423cc 190 PANTHER PTHR30546 1 188 2.6E-69 T 22-04-2016 VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 SUPERFAMILY SSF53850 44 283 4.59E-33 T 22-04-2016 VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 325 353 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 Gene3D G3DSA:3.40.190.10 19 146 5.0E-18 T 22-04-2016 VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 8 484 48.653 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 SMART SM00062 43 284 5.0E-25 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 283 6.7E-29 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 PANTHER PTHR21666 289 492 3.4E-122 T 22-04-2016 VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 Gene3D G3DSA:1.10.530.10 304 477 3.2E-37 T 22-04-2016 VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 SUPERFAMILY SSF53955 261 413 1.13E-35 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 SUPERFAMILY SSF53955 448 466 1.13E-35 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 PANTHER PTHR21666:SF215 289 492 3.4E-122 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VPUCM_RS12780 a55a282a30520b71ac1b0979acc5ac7a 525 Pfam PF01464 Transglycosylase SLT domain 314 417 1.0E-20 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VPUCM_RS04240 aaab8d1b502f258706a638736be28f24 354 Pfam PF01263 Aldose 1-epimerase 25 351 1.7E-93 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VPUCM_RS04240 aaab8d1b502f258706a638736be28f24 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VPUCM_RS04240 aaab8d1b502f258706a638736be28f24 354 Gene3D G3DSA:2.70.98.10 18 353 1.2E-124 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VPUCM_RS04240 aaab8d1b502f258706a638736be28f24 354 PANTHER PTHR10091 1 354 1.3E-137 T 22-04-2016 VPUCM_RS04240 aaab8d1b502f258706a638736be28f24 354 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 21 353 1.6E-150 T 22-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VPUCM_RS04240 aaab8d1b502f258706a638736be28f24 354 PIRSF PIRSF005096 7 354 9.8E-117 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VPUCM_RS04240 aaab8d1b502f258706a638736be28f24 354 SUPERFAMILY SSF74650 15 352 3.01E-111 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VPUCM_RS04240 aaab8d1b502f258706a638736be28f24 354 PANTHER PTHR10091:SF0 1 354 1.3E-137 T 22-04-2016 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 Gene3D G3DSA:3.40.50.720 1 223 2.9E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 PANTHER PTHR10366:SF77 2 232 1.6E-165 T 22-04-2016 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 PANTHER PTHR10366:SF77 251 334 1.6E-165 T 22-04-2016 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.32E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.32E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.32E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.32E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 SUPERFAMILY SSF51735 1 333 1.61E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 PANTHER PTHR10366 2 232 1.6E-165 T 22-04-2016 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 PANTHER PTHR10366 251 334 1.6E-165 T 22-04-2016 VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 5.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10415 11172421afa93a36792301296530a5cc 334 Gene3D G3DSA:3.90.25.10 259 330 3.1E-19 T 22-04-2016 VPUCM_RS07375 0c880a738bfc83a087333501cadba532 181 Gene3D G3DSA:3.40.630.30 1 174 2.9E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07375 0c880a738bfc83a087333501cadba532 181 Pfam PF13420 Acetyltransferase (GNAT) domain 55 163 2.3E-10 T 22-04-2016 VPUCM_RS07375 0c880a738bfc83a087333501cadba532 181 SUPERFAMILY SSF55729 40 178 8.19E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07375 0c880a738bfc83a087333501cadba532 181 PANTHER PTHR23091 1 175 1.9E-13 T 22-04-2016 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PANTHER PTHR11946 239 569 0.0 T 22-04-2016 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PANTHER PTHR11946 612 857 0.0 T 22-04-2016 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 3.1E-17 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 SUPERFAMILY SSF52374 4 226 3.11E-147 T 22-04-2016 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 SUPERFAMILY SSF52374 415 666 3.11E-147 T 22-04-2016 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Gene3D G3DSA:3.40.50.620 616 645 1.5E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Gene3D G3DSA:3.40.50.620 424 571 1.5E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Gene3D G3DSA:3.40.50.620 4 222 1.5E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 1.8E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.5E-9 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 9.8E-27 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 SUPERFAMILY SSF50677 226 414 8.79E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.473 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Gene3D G3DSA:1.10.730.10 646 792 5.4E-47 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.8E-79 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 Gene3D G3DSA:3.90.740.10 223 423 4.1E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PANTHER PTHR11946:SF7 239 569 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PANTHER PTHR11946:SF7 612 857 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VPUCM_RS12475 6b63d149bd86517046453ca0a2bd6b9e 857 SUPERFAMILY SSF47323 660 856 1.4E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 PANTHER PTHR10314:SF3 6 393 4.0E-225 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 7.5E-195 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 SUPERFAMILY SSF53686 5 387 9.17E-142 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 Gene3D G3DSA:3.40.50.1100 176 393 1.0E-94 T 22-04-2016 VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 Gene3D G3DSA:3.40.50.1100 96 175 2.8E-22 T 22-04-2016 VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 8.4E-51 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 PANTHER PTHR10314 6 393 4.0E-225 T 22-04-2016 VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 PIRSF PIRSF001413 1 395 7.9E-168 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS06335 9269f230eb1800bc03bcff3298636262 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.956 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 1.3E-223 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 PRINTS PR00095 Anthranilate synthase component I signature 463 477 5.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 PRINTS PR00095 Anthranilate synthase component I signature 448 462 5.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 PRINTS PR00095 Anthranilate synthase component I signature 368 381 5.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 PRINTS PR00095 Anthranilate synthase component I signature 354 367 5.9E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 PANTHER PTHR11236 13 521 2.1E-249 T 22-04-2016 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 PANTHER PTHR11236:SF22 13 521 2.1E-249 T 22-04-2016 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 Gene3D G3DSA:3.60.120.10 13 518 2.7E-159 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 8.1E-14 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 PIRSF PIRSF001373 3 525 3.2E-263 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 SUPERFAMILY SSF56322 14 517 1.31E-159 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VPUCM_RS06355 01c850c258e0fbe110d65c9dcd95a378 525 Pfam PF00425 chorismate binding enzyme 246 506 2.6E-85 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Gene3D G3DSA:2.40.50.180 60 107 3.6E-6 T 22-04-2016 VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Gene3D G3DSA:3.40.50.2300 183 311 1.6E-23 T 22-04-2016 VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 PANTHER PTHR22617 1 174 6.8E-85 T 22-04-2016 VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SMART SM00260 17 158 9.8E-26 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Pfam PF01584 CheW-like domain 21 160 1.6E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Pfam PF00072 Response regulator receiver domain 186 303 5.7E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SUPERFAMILY SSF50341 16 163 6.8E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 PIRSF PIRSF002867 1 313 1.4E-106 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SMART SM00448 184 305 1.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SUPERFAMILY SSF52172 183 311 3.7E-21 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS10485 7cbbfab8d06e0a9435b25ac2e0108bd7 317 PANTHER PTHR22617:SF37 1 174 6.8E-85 T 22-04-2016 VPUCM_RS08825 7471f9b3576a06a73e857abde014fbd5 142 Gene3D G3DSA:3.30.1460.10 3 127 3.4E-4 T 22-04-2016 VPUCM_RS08825 7471f9b3576a06a73e857abde014fbd5 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 4.1E-64 T 22-04-2016 IPR013353 Type III secretion system chaperone YscB VPUCM_RS08825 7471f9b3576a06a73e857abde014fbd5 142 SUPERFAMILY SSF69635 3 128 1.92E-52 T 22-04-2016 VPUCM_RS08825 7471f9b3576a06a73e857abde014fbd5 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 122 8.4E-27 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 Pfam PF00072 Response regulator receiver domain 6 115 3.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 Gene3D G3DSA:1.10.8.60 302 373 6.2E-25 T 22-04-2016 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 SMART SM00382 149 296 7.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 SMART SM00448 4 115 1.3E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 PANTHER PTHR32071 1 469 1.5E-265 T 22-04-2016 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 Pfam PF00158 Sigma-54 interaction domain 134 295 1.1E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 SUPERFAMILY SSF52172 3 173 2.42E-40 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 Gene3D G3DSA:3.40.50.2300 3 119 7.6E-36 T 22-04-2016 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 2.6E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 Gene3D G3DSA:1.10.10.60 416 459 2.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 SUPERFAMILY SSF46689 342 460 7.62E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 Gene3D G3DSA:3.40.50.300 128 299 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 SUPERFAMILY SSF52540 135 370 1.03E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 PANTHER PTHR32071:SF21 1 469 1.5E-265 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 VPUCM_RS11610 5e8fa75b6119deae82ce8063eb07d71d 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS04865 5ef215bef5410c0e8605ed75bf6d2316 233 Pfam PF00814 Glycoprotease family 30 174 1.8E-32 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS04865 5ef215bef5410c0e8605ed75bf6d2316 233 SUPERFAMILY SSF53067 4 107 4.27E-32 T 22-04-2016 VPUCM_RS04865 5ef215bef5410c0e8605ed75bf6d2316 233 SUPERFAMILY SSF53067 111 219 3.88E-28 T 22-04-2016 VPUCM_RS04865 5ef215bef5410c0e8605ed75bf6d2316 233 PANTHER PTHR11735:SF11 1 139 1.5E-61 T 22-04-2016 VPUCM_RS04865 5ef215bef5410c0e8605ed75bf6d2316 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 7.7E-70 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 VPUCM_RS04865 5ef215bef5410c0e8605ed75bf6d2316 233 PANTHER PTHR11735 1 139 1.5E-61 T 22-04-2016 VPUCM_RS04865 5ef215bef5410c0e8605ed75bf6d2316 233 Gene3D G3DSA:3.30.420.40 4 133 1.8E-47 T 22-04-2016 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 PANTHER PTHR30244 2 384 4.2E-148 T 22-04-2016 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:1.20.1330.10 286 339 2.3E-59 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:1.20.1330.10 54 171 2.3E-59 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 37 54 2.4E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 76 95 2.4E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 111 134 2.4E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF07196 Flagellin hook IN motif 195 252 1.2E-10 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.2E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 SUPERFAMILY SSF64518 1 384 3.14E-97 T 22-04-2016 VPUCM_RS12090 ccf936d351bd4ffecb37b5e94aeacafd 384 PANTHER PTHR30244:SF1 2 384 4.2E-148 T 22-04-2016 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 114 127 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 Pfam PF04542 Sigma-70 region 2 90 159 6.4E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 Pfam PF04539 Sigma-70 region 3 170 243 2.4E-22 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 Pfam PF00140 Sigma-70 factor, region 1.2 52 85 4.3E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 Gene3D G3DSA:1.10.10.10 163 212 1.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 Pfam PF04545 Sigma-70, region 4 258 311 1.2E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 Gene3D G3DSA:1.10.10.10 255 318 2.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 283 309 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 86 313 3.5E-36 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 PRINTS PR00046 Major sigma-70 factor signature 114 127 6.29E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 PRINTS PR00046 Major sigma-70 factor signature 283 298 6.29E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 PRINTS PR00046 Major sigma-70 factor signature 138 146 6.29E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 PRINTS PR00046 Major sigma-70 factor signature 262 274 6.29E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 PRINTS PR00046 Major sigma-70 factor signature 298 309 6.29E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 16 324 39.664 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 SUPERFAMILY SSF88659 163 236 2.09E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 Gene3D G3DSA:1.10.601.10 25 159 2.5E-58 T 22-04-2016 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 SUPERFAMILY SSF88946 51 160 9.42E-46 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 PANTHER PTHR30603 1 329 1.3E-183 T 22-04-2016 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 PANTHER PTHR30603:SF15 1 329 1.3E-183 T 22-04-2016 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 324 6.5E-139 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13230 619b0afb4836979f3fb4f1c89541f263 329 SUPERFAMILY SSF88659 220 319 1.87E-24 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 4.5E-29 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 Pfam PF01416 tRNA pseudouridine synthase 8 103 6.5E-11 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.54 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 5.2E-73 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 SUPERFAMILY SSF55120 1 257 5.9E-94 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 PIRSF PIRSF001430 1 254 1.4E-76 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 Gene3D G3DSA:3.30.70.580 1 104 1.8E-38 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 PANTHER PTHR11142 1 259 1.1E-103 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11315 e7aa5e64d59025ba895401de840ff298 264 Gene3D G3DSA:3.30.70.660 106 241 9.2E-45 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS09865 ad3a4810e3d58e84147f7f044471b48d 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.8E-31 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPUCM_RS09865 ad3a4810e3d58e84147f7f044471b48d 400 PANTHER PTHR37480 2 400 1.9E-254 T 22-04-2016 VPUCM_RS09865 ad3a4810e3d58e84147f7f044471b48d 400 Gene3D G3DSA:3.40.50.720 184 281 5.4E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09865 ad3a4810e3d58e84147f7f044471b48d 400 Gene3D G3DSA:3.40.50.720 40 151 5.4E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09865 ad3a4810e3d58e84147f7f044471b48d 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPUCM_RS09865 ad3a4810e3d58e84147f7f044471b48d 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.613 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPUCM_RS09865 ad3a4810e3d58e84147f7f044471b48d 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 9.1E-113 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPUCM_RS01830 9668a2f7c457f3cb0188d51b2a99251f 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.416 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01830 9668a2f7c457f3cb0188d51b2a99251f 200 SUPERFAMILY SSF52016 1 196 2.16E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VPUCM_RS01830 9668a2f7c457f3cb0188d51b2a99251f 200 PANTHER PTHR11670 1 200 1.7E-118 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01830 9668a2f7c457f3cb0188d51b2a99251f 200 Gene3D G3DSA:3.20.19.10 1 194 2.4E-49 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VPUCM_RS01830 9668a2f7c457f3cb0188d51b2a99251f 200 Pfam PF00694 Aconitase C-terminal domain 1 125 9.4E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01830 9668a2f7c457f3cb0188d51b2a99251f 200 PANTHER PTHR11670:SF27 1 200 1.7E-118 T 22-04-2016 VPUCM_RS01830 9668a2f7c457f3cb0188d51b2a99251f 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 9.0E-99 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.084 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 4.6E-241 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 3.6E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Gene3D G3DSA:3.30.54.20 132 188 7.4E-22 T 22-04-2016 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.1E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 SMART SM00863 171 220 5.1E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 SUPERFAMILY SSF55681 244 527 1.57E-98 T 22-04-2016 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Gene3D G3DSA:3.40.50.800 533 639 6.8E-36 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 SUPERFAMILY SSF52954 530 638 1.24E-31 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Pfam PF02824 TGS domain 4 61 1.2E-11 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 PANTHER PTHR11451 1 636 0.0 T 22-04-2016 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 PANTHER PTHR11451:SF31 1 636 0.0 T 22-04-2016 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Gene3D G3DSA:3.10.20.30 1 64 3.5E-22 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Gene3D G3DSA:3.30.980.10 67 130 1.2E-41 T 22-04-2016 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Gene3D G3DSA:3.30.980.10 189 224 1.2E-41 T 22-04-2016 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 SUPERFAMILY SSF55186 65 242 3.27E-65 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Gene3D G3DSA:3.30.930.10 243 531 2.8E-122 T 22-04-2016 VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Pfam PF03129 Anticodon binding domain 542 631 1.9E-21 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS09625 0012015625fdb90e2e42247d426c7469 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 7.7E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PANTHER PTHR30161 1 705 0.0 T 22-04-2016 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 4.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 4.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 4.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 4.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 4.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 4.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PIRSF PIRSF005419 1 705 7.1E-264 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 PANTHER PTHR30161:SF2 1 705 0.0 T 22-04-2016 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 22-04-2016 IPR025505 FHIPEP conserved site VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 703 2.2E-300 T 22-04-2016 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 VPUCM_RS08655 0a5d75c91cbcd7cb0393d62d06343c54 705 Pfam PF00771 FHIPEP family 26 695 7.2E-238 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS13915 131f7110817240e9ce2aa173b2d4390d 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.746 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS13915 131f7110817240e9ce2aa173b2d4390d 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 9.4E-182 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS13915 131f7110817240e9ce2aa173b2d4390d 418 PANTHER PTHR21090 1 418 3.0E-210 T 22-04-2016 VPUCM_RS13915 131f7110817240e9ce2aa173b2d4390d 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 4.0E-122 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VPUCM_RS13915 131f7110817240e9ce2aa173b2d4390d 418 Gene3D G3DSA:3.65.10.10 221 417 2.7E-57 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VPUCM_RS13915 131f7110817240e9ce2aa173b2d4390d 418 SUPERFAMILY SSF55205 6 417 5.23E-141 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VPUCM_RS13915 131f7110817240e9ce2aa173b2d4390d 418 Gene3D G3DSA:3.65.10.10 22 220 2.5E-70 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 Gene3D G3DSA:3.90.1150.10 322 410 2.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 Gene3D G3DSA:3.90.1150.10 4 54 2.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 4.8E-206 T 22-04-2016 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 Gene3D G3DSA:3.40.640.10 55 309 7.7E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 3.8E-150 T 22-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 PANTHER PTHR11986:SF61 8 417 4.3E-225 T 22-04-2016 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 PANTHER PTHR11986 8 417 4.3E-225 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 SUPERFAMILY SSF53383 7 410 2.74E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS08950 b0876b1ccb5cc2750729fc667a3f7c12 421 Pfam PF00202 Aminotransferase class-III 16 409 9.8E-79 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS00780 ed3d36abfb04b43bf51e7a3d87aa3dc7 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 444 9.2E-128 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VPUCM_RS00780 ed3d36abfb04b43bf51e7a3d87aa3dc7 463 Pfam PF00860 Permease family 22 414 4.5E-99 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS00780 ed3d36abfb04b43bf51e7a3d87aa3dc7 463 PANTHER PTHR11119 5 460 3.1E-262 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS00780 ed3d36abfb04b43bf51e7a3d87aa3dc7 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VPUCM_RS00780 ed3d36abfb04b43bf51e7a3d87aa3dc7 463 TIGRFAM TIGR03173 pbuX: xanthine permease 27 446 5.9E-132 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 VPUCM_RS00780 ed3d36abfb04b43bf51e7a3d87aa3dc7 463 PANTHER PTHR11119:SF44 5 460 3.1E-262 T 22-04-2016 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 SUPERFAMILY SSF47757 3 75 2.48E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 PANTHER PTHR24422 1 275 1.3E-121 T 22-04-2016 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 PANTHER PTHR24422:SF9 1 275 1.3E-121 T 22-04-2016 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 SMART SM00138 8 272 4.7E-132 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 SUPERFAMILY SSF53335 76 269 2.55E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 Gene3D G3DSA:3.40.50.150 75 270 1.1E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 Gene3D G3DSA:1.10.155.10 3 74 4.9E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.3E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 9.7E-69 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VPUCM_RS12150 5205aeb81f32ee592b36e66e7574a29e 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 55 7.1E-10 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.0E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 PANTHER PTHR11921 3 229 1.6E-102 T 22-04-2016 VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 Gene3D G3DSA:1.10.1060.10 107 230 1.0E-35 T 22-04-2016 VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.1E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 SUPERFAMILY SSF46548 107 226 6.1E-31 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 SUPERFAMILY SSF54292 5 106 1.04E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.0E-95 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VPUCM_RS14880 b661bce73a5130d9e6b24dbb0c6b45a9 246 Gene3D G3DSA:3.10.20.30 3 106 5.3E-35 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 10 454 37.755 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 Gene3D G3DSA:1.10.3090.10 184 419 1.1E-47 T 22-04-2016 VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 454 3.7E-162 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 447 3.2E-37 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 SUPERFAMILY SSF81301 26 181 3.49E-40 T 22-04-2016 VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 Gene3D G3DSA:3.30.460.10 35 183 9.5E-50 T 22-04-2016 VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 Pfam PF01743 Poly A polymerase head domain 54 184 2.0E-39 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 SUPERFAMILY SSF81891 182 419 2.49E-48 T 22-04-2016 VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 211 271 3.8E-22 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 PANTHER PTHR13734 18 326 8.1E-127 T 22-04-2016 VPUCM_RS12945 60cbedad3185fb67123d880a96395c8b 455 PANTHER PTHR13734:SF47 18 326 8.1E-127 T 22-04-2016 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 PANTHER PTHR22749:SF0 1 308 3.2E-144 T 22-04-2016 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 4.9E-108 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Pfam PF01687 Riboflavin kinase 184 306 7.2E-39 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SMART SM00904 183 307 9.5E-64 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Gene3D G3DSA:3.40.50.620 1 179 1.4E-68 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Pfam PF06574 FAD synthetase 13 167 2.0E-59 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 PIRSF PIRSF004491 1 311 2.8E-107 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Gene3D G3DSA:2.40.30.30 180 308 3.2E-40 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SUPERFAMILY SSF82114 174 309 3.49E-45 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 PANTHER PTHR22749 1 308 3.2E-144 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 56 1.8E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VPUCM_RS02610 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SUPERFAMILY SSF52374 16 175 2.67E-36 T 22-04-2016 VPUCM_RS00080 62c33548e98d811c8fc04c756ad6b4b0 417 PANTHER PTHR11751 11 415 1.1E-181 T 22-04-2016 VPUCM_RS00080 62c33548e98d811c8fc04c756ad6b4b0 417 Gene3D G3DSA:3.40.640.10 53 266 4.6E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS00080 62c33548e98d811c8fc04c756ad6b4b0 417 PANTHER PTHR11751:SF419 11 415 1.1E-181 T 22-04-2016 VPUCM_RS00080 62c33548e98d811c8fc04c756ad6b4b0 417 Pfam PF00155 Aminotransferase class I and II 67 401 3.8E-27 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VPUCM_RS00080 62c33548e98d811c8fc04c756ad6b4b0 417 SUPERFAMILY SSF53383 13 411 2.02E-61 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS00080 62c33548e98d811c8fc04c756ad6b4b0 417 Gene3D G3DSA:3.90.1150.10 267 410 3.8E-16 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS09765 6d81d5125e53f9bc172084d1a6c4279c 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 3.1E-54 T 22-04-2016 IPR018724 2OG-Fe dioxygenase VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.6E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.6E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.6E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.6E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.6E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 PANTHER PTHR10381:SF22 12 206 6.2E-142 T 22-04-2016 VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 Gene3D G3DSA:3.90.226.10 16 205 2.7E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 SUPERFAMILY SSF52096 23 206 8.42E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.409 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 Pfam PF00574 Clp protease 25 205 1.4E-89 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 1.2E-107 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site VPUCM_RS05125 5f4ed8be549056570a84855eeb5d2155 208 PANTHER PTHR10381 12 206 6.2E-142 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 PANTHER PTHR11361 3 853 0.0 T 22-04-2016 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 SMART SM00534 606 793 3.5E-118 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Pfam PF05188 MutS domain II 128 253 1.2E-30 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Gene3D G3DSA:3.30.420.110 127 255 9.7E-42 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Gene3D G3DSA:1.10.1420.10 264 467 3.5E-57 T 22-04-2016 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Gene3D G3DSA:3.40.1170.10 3 120 3.8E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 SMART SM00533 283 590 3.0E-109 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 SUPERFAMILY SSF52540 566 797 1.95E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Pfam PF01624 MutS domain I 8 119 2.6E-41 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 SUPERFAMILY SSF55271 4 113 7.85E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 PANTHER PTHR11361:SF86 3 853 0.0 T 22-04-2016 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Pfam PF05192 MutS domain III 269 558 2.3E-39 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Gene3D G3DSA:3.40.50.300 566 797 4.4E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Pfam PF05190 MutS family domain IV 427 517 9.8E-31 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 SUPERFAMILY SSF53150 114 266 2.35E-41 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.231 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 SUPERFAMILY SSF48334 267 564 7.46E-93 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VPUCM_RS13225 3a89c0cd747049ab6a6bfc15f4f686f8 853 Pfam PF00488 MutS domain V 609 796 1.2E-86 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VPUCM_RS04140 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 177 187 3.3E-10 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS04140 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 3.3E-10 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS04140 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 420 3.3E-10 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS04140 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 383 401 3.3E-10 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS04140 151a71f54a6abacda5a2187b4a56706b 487 Pfam PF00263 Bacterial type II and III secretion system protein 254 417 4.3E-38 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VPUCM_RS04140 151a71f54a6abacda5a2187b4a56706b 487 PANTHER PTHR30332:SF1 154 444 6.4E-57 T 22-04-2016 VPUCM_RS04140 151a71f54a6abacda5a2187b4a56706b 487 PANTHER PTHR30332 154 444 6.4E-57 T 22-04-2016 VPUCM_RS04140 151a71f54a6abacda5a2187b4a56706b 487 Pfam PF13629 Pilus formation protein N terminal region 27 96 2.6E-19 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 SUPERFAMILY SSF51569 1 300 1.08E-90 T 22-04-2016 VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 Pfam PF02436 Conserved carboxylase domain 292 494 8.3E-58 T 22-04-2016 IPR003379 Carboxylase, conserved domain VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 SUPERFAMILY SSF51230 522 594 4.71E-20 T 22-04-2016 IPR011053 Single hybrid motif VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 22-04-2016 IPR001882 Biotin-binding site VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 PANTHER PTHR18866 7 588 2.6E-224 T 22-04-2016 VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 PANTHER PTHR18866:SF109 7 588 2.6E-224 T 22-04-2016 VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 SUPERFAMILY SSF89000 297 462 3.06E-50 T 22-04-2016 VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 589 1.1E-266 T 22-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 Gene3D G3DSA:3.20.20.70 2 282 3.8E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 Pfam PF00364 Biotin-requiring enzyme 529 593 2.9E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 Gene3D G3DSA:2.40.50.100 524 594 2.7E-24 T 22-04-2016 VPUCM_RS13135 8a77aa968e29fe881eca29bba87148a4 595 Pfam PF00682 HMGL-like 6 270 2.4E-60 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:1.10.10.10 6 87 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.9E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 Pfam PF03466 LysR substrate binding domain 90 287 3.6E-19 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 SUPERFAMILY SSF53850 90 291 9.77E-24 T 22-04-2016 VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 PANTHER PTHR30126 1 299 2.1E-153 T 22-04-2016 VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:3.40.190.10 90 172 3.9E-7 T 22-04-2016 VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:3.40.190.10 173 255 8.4E-7 T 22-04-2016 VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 PANTHER PTHR30126:SF18 1 299 2.1E-153 T 22-04-2016 VPUCM_RS15980 629f83048d8fae13f24ef83182c5e9d3 300 SUPERFAMILY SSF46785 6 87 3.21E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS12135 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF13861 FlgD Tudor-like domain 93 229 2.8E-15 T 22-04-2016 IPR025963 FlgD Tudor-like domain VPUCM_RS12135 b9450fee049d80b2fa1cc0a2db82576c 235 PANTHER PTHR30435:SF15 15 224 1.8E-59 T 22-04-2016 VPUCM_RS12135 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF13860 FlgD Ig-like domain 115 184 2.5E-19 T 22-04-2016 IPR025965 FlgD Ig-like domain VPUCM_RS12135 b9450fee049d80b2fa1cc0a2db82576c 235 PANTHER PTHR30435 15 224 1.8E-59 T 22-04-2016 VPUCM_RS12135 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 1.3E-21 T 22-04-2016 IPR005648 Flagellar hook capping protein VPUCM_RS08395 3adeddcfcafa7d9191990cb5cb70b087 415 Gene3D G3DSA:3.90.10.10 188 251 1.3E-4 T 22-04-2016 VPUCM_RS08395 3adeddcfcafa7d9191990cb5cb70b087 415 PANTHER PTHR30462 6 403 4.1E-184 T 22-04-2016 VPUCM_RS08395 3adeddcfcafa7d9191990cb5cb70b087 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 10 402 8.8E-106 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 VPUCM_RS08395 3adeddcfcafa7d9191990cb5cb70b087 415 PANTHER PTHR30462:SF1 6 403 4.1E-184 T 22-04-2016 VPUCM_RS08395 3adeddcfcafa7d9191990cb5cb70b087 415 Pfam PF04403 Paraquat-inducible protein A 248 403 4.2E-47 T 22-04-2016 IPR007498 Paraquat-inducible protein A VPUCM_RS08395 3adeddcfcafa7d9191990cb5cb70b087 415 Pfam PF04403 Paraquat-inducible protein A 54 205 1.3E-36 T 22-04-2016 IPR007498 Paraquat-inducible protein A VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 PANTHER PTHR30537 1 298 2.7E-149 T 22-04-2016 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 SUPERFAMILY SSF53850 92 296 1.57E-38 T 22-04-2016 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:1.10.10.10 1 86 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:3.40.190.10 94 179 6.6E-34 T 22-04-2016 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 PANTHER PTHR30537:SF26 1 298 2.7E-149 T 22-04-2016 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:3.40.190.10 180 259 7.4E-15 T 22-04-2016 VPUCM_RS12645 d5a435937e46734dfc50eb77c35ac110 306 Pfam PF03466 LysR substrate binding domain 91 291 2.7E-37 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS11195 9eaa3d08e17b1d5951a6d34c9749e7f8 94 PANTHER PTHR33336 1 94 7.5E-21 T 22-04-2016 VPUCM_RS11195 9eaa3d08e17b1d5951a6d34c9749e7f8 94 SUPERFAMILY SSF54909 1 93 6.52E-28 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS11195 9eaa3d08e17b1d5951a6d34c9749e7f8 94 PANTHER PTHR33336:SF5 1 94 7.5E-21 T 22-04-2016 VPUCM_RS11195 9eaa3d08e17b1d5951a6d34c9749e7f8 94 Gene3D G3DSA:3.30.70.900 1 93 2.0E-30 T 22-04-2016 VPUCM_RS11195 9eaa3d08e17b1d5951a6d34c9749e7f8 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 2.7E-19 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 Gene3D G3DSA:3.30.200.20 199 351 8.0E-16 T 22-04-2016 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SUPERFAMILY SSF52075 37 207 1.44E-34 T 22-04-2016 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 209 236 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 Gene3D G3DSA:3.80.10.10 4 198 4.9E-36 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 Pfam PF00069 Protein kinase domain 203 365 5.6E-17 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 PANTHER PTHR23155 26 242 4.4E-60 T 22-04-2016 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00364 103 122 11.0 T 22-04-2016 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00364 126 145 140.0 T 22-04-2016 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00364 58 77 13.0 T 22-04-2016 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00364 35 54 90.0 T 22-04-2016 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00220 203 404 5.9E-6 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SUPERFAMILY SSF56112 195 367 1.91E-25 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 PANTHER PTHR23155:SF644 26 242 4.4E-60 T 22-04-2016 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 Pfam PF13855 Leucine rich repeat 104 162 2.0E-7 T 22-04-2016 IPR001611 Leucine-rich repeat GO:0005515 VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00369 58 81 12.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00369 127 148 140.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00369 37 57 32.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00369 102 126 52.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VPUCM_RS06230 6ab479395941a2c789a3bfe239e694c2 412 SMART SM00369 149 172 23.0 T 22-04-2016 IPR003591 Leucine-rich repeat, typical subtype VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 PIRSF PIRSF000167 9 460 1.7E-173 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 Pfam PF06969 HemN C-terminal domain 369 437 1.4E-11 T 22-04-2016 IPR010723 HemN, C-terminal VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 Gene3D G3DSA:3.80.30.20 59 289 1.0E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 PANTHER PTHR13932:SF6 5 457 1.7E-263 T 22-04-2016 VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 Pfam PF04055 Radical SAM superfamily 63 234 3.3E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 PANTHER PTHR13932 5 457 1.7E-263 T 22-04-2016 VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 SMART SM00729 58 278 4.6E-55 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 3.6E-207 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VPUCM_RS00575 6a72ee9affe5f20fa89e8babf5c81a79 463 SUPERFAMILY SSF102114 12 450 5.36E-145 T 22-04-2016 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 SUPERFAMILY SSF56925 18 171 2.35E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 Gene3D G3DSA:2.40.160.20 5 189 7.3E-49 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 273 292 2.8E-6 T 22-04-2016 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 293 313 2.8E-6 T 22-04-2016 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 255 272 2.8E-6 T 22-04-2016 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 PANTHER PTHR30128:SF15 4 317 2.7E-104 T 22-04-2016 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 PRINTS PR01021 OMPA domain signature 255 271 8.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 PRINTS PR01021 OMPA domain signature 240 255 8.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 PRINTS PR01021 OMPA domain signature 210 232 8.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 Pfam PF01389 OmpA-like transmembrane domain 18 170 8.6E-32 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 SUPERFAMILY SSF103088 184 310 9.29E-39 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 Pfam PF00691 OmpA family 210 304 1.6E-25 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 Gene3D G3DSA:3.30.1330.60 197 310 2.2E-41 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS12200 389563399a69c33c61ce7a37d27de955 319 PANTHER PTHR30128 4 317 2.7E-104 T 22-04-2016 VPUCM_RS07345 53baacd5579d47586131d49b77a3616a 133 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 5 133 8.0E-12 T 22-04-2016 IPR020353 Toxin YafO VPUCM_RS07345 53baacd5579d47586131d49b77a3616a 133 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 30 131 1.8E-24 T 22-04-2016 IPR020353 Toxin YafO VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 Gene3D G3DSA:1.10.10.60 254 302 1.7E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 PANTHER PTHR11019:SF68 46 304 2.1E-51 T 22-04-2016 VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 SMART SM00342 217 300 2.7E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 PANTHER PTHR11019 46 304 2.1E-51 T 22-04-2016 VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 Pfam PF01965 DJ-1/PfpI family 51 162 1.3E-9 T 22-04-2016 IPR002818 DJ-1/PfpI VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 Pfam PF12833 Helix-turn-helix domain 223 302 2.1E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 Gene3D G3DSA:1.10.10.60 207 253 1.2E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 SUPERFAMILY SSF46689 253 303 1.43E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 SUPERFAMILY SSF46689 203 251 3.67E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 SUPERFAMILY SSF52317 11 184 2.29E-25 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS10270 f71b7b116850cc61287d3e39125fee63 304 Gene3D G3DSA:3.40.50.880 49 206 3.2E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 Pfam PF01979 Amidohydrolase family 51 374 1.5E-37 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 PANTHER PTHR11113 1 374 6.7E-168 T 22-04-2016 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 PIRSF PIRSF038994 1 378 1.3E-121 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 Gene3D G3DSA:3.20.20.140 55 346 2.3E-100 T 22-04-2016 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 PANTHER PTHR11113:SF7 1 374 6.7E-168 T 22-04-2016 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 SUPERFAMILY SSF51338 1 53 1.5E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 7.9E-155 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 Gene3D G3DSA:2.30.40.10 347 363 1.5E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 Gene3D G3DSA:2.30.40.10 2 54 1.5E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS11880 78b3d2a78de4db31ad703d8104929be8 378 SUPERFAMILY SSF51556 54 347 1.13E-101 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 SMART SM00052 290 434 2.1E-13 T 22-04-2016 IPR001633 EAL domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 PANTHER PTHR10799:SF774 151 390 1.8E-83 T 22-04-2016 VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 PANTHER PTHR10799:SF774 1 12 1.8E-83 T 22-04-2016 VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 SUPERFAMILY SSF141868 296 434 2.48E-41 T 22-04-2016 IPR001633 EAL domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 Gene3D G3DSA:3.30.70.270 124 287 3.2E-50 T 22-04-2016 VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 Pfam PF00563 EAL domain 296 423 7.0E-34 T 22-04-2016 IPR001633 EAL domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 SMART SM00086 69 111 9.5E-7 T 22-04-2016 IPR001610 PAC motif VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 Pfam PF13426 PAS domain 8 109 2.6E-19 T 22-04-2016 IPR000014 PAS domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 Gene3D G3DSA:3.30.450.20 2 105 1.0E-26 T 22-04-2016 VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 Gene3D G3DSA:3.20.20.450 294 433 2.2E-46 T 22-04-2016 IPR001633 EAL domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 PANTHER PTHR10799 1 12 1.8E-83 T 22-04-2016 VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 118 278 6.6E-39 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 Pfam PF00990 Diguanylate cyclase, GGDEF domain 122 275 1.5E-43 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 SMART SM00091 1 64 4.9E-5 T 22-04-2016 IPR000014 PAS domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 118 2.1E-23 T 22-04-2016 IPR000014 PAS domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 PANTHER PTHR10799 151 390 1.8E-83 T 22-04-2016 VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 SUPERFAMILY SSF55785 5 108 1.08E-28 T 22-04-2016 IPR000014 PAS domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 SMART SM00267 111 280 1.1E-60 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS16570 5bfee25d90e4374c8671b495cce5e051 435 SUPERFAMILY SSF55073 127 282 7.85E-46 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS08795 96f1fd168b1950e2eb2a663397af0f7c 208 Pfam PF09025 YopR, type III needle-polymerisation regulator 68 208 1.0E-65 T 22-04-2016 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 VPUCM_RS08795 96f1fd168b1950e2eb2a663397af0f7c 208 SUPERFAMILY SSF140591 88 188 2.35E-8 T 22-04-2016 VPUCM_RS08795 96f1fd168b1950e2eb2a663397af0f7c 208 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 81 207 1.9E-52 T 22-04-2016 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 VPUCM_RS09135 302a24b8bf4c4fd10228c880dd1d58ea 181 SMART SM01118 10 181 1.2E-15 T 22-04-2016 IPR023577 CYTH domain VPUCM_RS09135 302a24b8bf4c4fd10228c880dd1d58ea 181 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 11 180 9.2E-17 T 22-04-2016 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 VPUCM_RS09135 302a24b8bf4c4fd10228c880dd1d58ea 181 Gene3D G3DSA:2.40.320.10 11 180 5.2E-38 T 22-04-2016 IPR023577 CYTH domain VPUCM_RS09135 302a24b8bf4c4fd10228c880dd1d58ea 181 PANTHER PTHR21028 4 179 7.6E-36 T 22-04-2016 VPUCM_RS09135 302a24b8bf4c4fd10228c880dd1d58ea 181 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 139 7.0E-8 T 22-04-2016 VPUCM_RS09135 302a24b8bf4c4fd10228c880dd1d58ea 181 SUPERFAMILY SSF55154 11 179 1.03E-38 T 22-04-2016 IPR033469 CYTH-like domain VPUCM_RS09135 302a24b8bf4c4fd10228c880dd1d58ea 181 Pfam PF01928 CYTH domain 11 175 5.6E-19 T 22-04-2016 IPR023577 CYTH domain VPUCM_RS09135 302a24b8bf4c4fd10228c880dd1d58ea 181 PANTHER PTHR21028:SF2 4 179 7.6E-36 T 22-04-2016 VPUCM_RS07995 aac3e31ed7657b5c6e610eed7429d4bc 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 5.6E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VPUCM_RS07995 aac3e31ed7657b5c6e610eed7429d4bc 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 3.6E-84 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VPUCM_RS07995 aac3e31ed7657b5c6e610eed7429d4bc 350 PANTHER PTHR30074 32 344 6.6E-154 T 22-04-2016 VPUCM_RS07995 aac3e31ed7657b5c6e610eed7429d4bc 350 SUPERFAMILY SSF81342 119 332 1.1E-46 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VPUCM_RS07995 aac3e31ed7657b5c6e610eed7429d4bc 350 Gene3D G3DSA:1.20.950.20 119 334 5.5E-65 T 22-04-2016 VPUCM_RS07995 aac3e31ed7657b5c6e610eed7429d4bc 350 PANTHER PTHR30074:SF2 32 344 6.6E-154 T 22-04-2016 VPUCM_RS09120 de13ade37fd11d431974cc77d5d1fc29 362 Gene3D G3DSA:2.40.160.10 132 358 8.4E-8 T 22-04-2016 IPR023614 Porin domain VPUCM_RS09120 de13ade37fd11d431974cc77d5d1fc29 362 SUPERFAMILY SSF56935 26 362 9.16E-26 T 22-04-2016 VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 PANTHER PTHR20919 2 313 4.5E-157 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.228 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 SUPERFAMILY SSF52317 18 297 7.4E-102 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-127 T 22-04-2016 VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 Gene3D G3DSA:3.40.50.880 34 301 9.1E-121 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 PIRSF PIRSF000450 1 309 5.0E-147 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.7E-161 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 PANTHER PTHR20919:SF0 2 313 4.5E-157 T 22-04-2016 VPUCM_RS09090 6b8fa43204976f8691335e18b1aba0b0 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 9.7E-135 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VPUCM_RS10760 1c455126f31154667bb7da0df3b729d9 245 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 6 245 43.275 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VPUCM_RS10760 1c455126f31154667bb7da0df3b729d9 245 Gene3D G3DSA:3.40.50.150 22 244 9.8E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10760 1c455126f31154667bb7da0df3b729d9 245 PANTHER PTHR10108 8 244 2.4E-115 T 22-04-2016 VPUCM_RS10760 1c455126f31154667bb7da0df3b729d9 245 SUPERFAMILY SSF53335 23 245 5.73E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10760 1c455126f31154667bb7da0df3b729d9 245 Pfam PF13649 Methyltransferase domain 63 161 1.5E-13 T 22-04-2016 VPUCM_RS10760 1c455126f31154667bb7da0df3b729d9 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 4.4E-118 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VPUCM_RS10760 1c455126f31154667bb7da0df3b729d9 245 PANTHER PTHR10108:SF809 8 244 2.4E-115 T 22-04-2016 VPUCM_RS10760 1c455126f31154667bb7da0df3b729d9 245 PIRSF PIRSF006325 4 245 2.7E-125 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 3.0E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 Gene3D G3DSA:3.30.1390.10 51 122 1.8E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 9.6E-30 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.522 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 9.7E-47 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 Gene3D G3DSA:1.20.5.710 2 50 8.6E-22 T 22-04-2016 VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 1.0E-28 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 SUPERFAMILY SSF48300 4 58 8.76E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS15225 97cda421c0e4a09f168303e1508af077 122 SUPERFAMILY SSF54736 51 122 1.46E-24 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.2E-40 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 PANTHER PTHR15893 1 85 2.9E-53 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 20 82 1.1E-32 T 22-04-2016 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01765 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 22-04-2016 VPUCM_RS00910 c66e54f18a9ae97cd71d0b33cfb1ccf1 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 5.6E-44 T 22-04-2016 IPR013527 YicC-like, N-terminal VPUCM_RS00910 c66e54f18a9ae97cd71d0b33cfb1ccf1 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 7.8E-118 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 VPUCM_RS00910 c66e54f18a9ae97cd71d0b33cfb1ccf1 288 PANTHER PTHR30636 1 288 3.9E-112 T 22-04-2016 VPUCM_RS00910 c66e54f18a9ae97cd71d0b33cfb1ccf1 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.4E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 PANTHER PTHR23115 1 184 3.2E-251 T 22-04-2016 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 PANTHER PTHR23115 251 472 3.2E-251 T 22-04-2016 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 SUPERFAMILY SSF50447 262 393 4.04E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 PANTHER PTHR23115:SF69 1 184 3.2E-251 T 22-04-2016 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 PANTHER PTHR23115:SF69 251 472 3.2E-251 T 22-04-2016 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.9E-46 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 Gene3D G3DSA:3.40.50.300 9 283 8.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 154 4.8E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 1.9E-46 T 22-04-2016 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 9.5E-301 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 Gene3D G3DSA:2.40.30.10 293 394 3.1E-24 T 22-04-2016 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 SUPERFAMILY SSF52540 9 277 2.06E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 Gene3D G3DSA:3.30.70.870 395 463 5.2E-14 T 22-04-2016 VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS04035 32b5b3d14880a53e486ea043e826f9d1 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.832 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 PANTHER PTHR26402:SF596 3 237 8.0E-109 T 22-04-2016 VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 SUPERFAMILY SSF46894 134 235 1.47E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 Gene3D G3DSA:3.40.50.2300 2 122 8.3E-36 T 22-04-2016 VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 SMART SM00862 158 234 3.4E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 SUPERFAMILY SSF52172 2 123 1.71E-36 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 Gene3D G3DSA:1.10.10.10 135 235 2.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 PANTHER PTHR26402 3 237 8.0E-109 T 22-04-2016 VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.0E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS10810 113adc3ae8d269bb6202ab1d9d8df245 237 SMART SM00448 3 113 8.6E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS12610 c04d9868162aa3cd83d428457ec1c01a 521 SMART SM00267 351 521 8.6E-34 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS12610 c04d9868162aa3cd83d428457ec1c01a 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 519 1.8E-35 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS12610 c04d9868162aa3cd83d428457ec1c01a 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 1.1E-34 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS12610 c04d9868162aa3cd83d428457ec1c01a 521 SUPERFAMILY SSF55073 366 518 2.35E-34 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS12610 c04d9868162aa3cd83d428457ec1c01a 521 Gene3D G3DSA:3.30.70.270 364 519 6.7E-39 T 22-04-2016 VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 248 5.8E-57 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 SUPERFAMILY SSF53850 1 251 8.4E-59 T 22-04-2016 VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 SMART SM00079 29 249 0.0066 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 Gene3D G3DSA:3.40.190.10 106 206 3.2E-29 T 22-04-2016 VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 PANTHER PTHR18966:SF205 29 251 7.9E-116 T 22-04-2016 VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 SMART SM00062 29 250 1.0E-75 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 Gene3D G3DSA:3.40.190.10 209 252 6.6E-35 T 22-04-2016 VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 Gene3D G3DSA:3.40.190.10 28 105 6.6E-35 T 22-04-2016 VPUCM_RS00040 cf2936df12e6b57c3a141f5a34849cf1 253 PANTHER PTHR18966 29 251 7.9E-116 T 22-04-2016 VPUCM_RS11605 765f204838c257ecffd979823c886ad3 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 6.0E-29 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VPUCM_RS11605 765f204838c257ecffd979823c886ad3 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.721 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VPUCM_RS11605 765f204838c257ecffd979823c886ad3 103 PANTHER PTHR34653 5 103 2.8E-25 T 22-04-2016 VPUCM_RS11605 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 1.0E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VPUCM_RS11605 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 1.0E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VPUCM_RS11605 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 1.0E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VPUCM_RS11605 765f204838c257ecffd979823c886ad3 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 18 102 1.1E-18 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 Gene3D G3DSA:3.10.420.10 6 153 2.3E-60 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 PANTHER PTHR36918 1 151 1.9E-81 T 22-04-2016 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 SUPERFAMILY SSF54611 4 143 4.8E-52 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.171 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 1.2E-59 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 PANTHER PTHR36918:SF1 1 151 1.9E-81 T 22-04-2016 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.5E-38 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.5E-38 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.5E-38 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.5E-38 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS14835 ae31bdc448c73792b5db819da1c363a5 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.4E-55 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 22-04-2016 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 22-04-2016 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 22-04-2016 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 22-04-2016 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 22-04-2016 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 Gene3D G3DSA:3.30.230.10 3 165 6.9E-44 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 PANTHER PTHR20861 1 317 1.4E-122 T 22-04-2016 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 SUPERFAMILY SSF54211 4 191 2.66E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 30.102 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 1.1E-108 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 PANTHER PTHR20861:SF1 1 317 1.4E-122 T 22-04-2016 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 Gene3D G3DSA:3.30.70.890 174 304 7.6E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 Pfam PF08544 GHMP kinases C terminal 218 291 3.3E-9 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 SUPERFAMILY SSF55060 178 294 5.76E-33 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 PIRSF PIRSF000676 1 316 1.4E-79 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VPUCM_RS02440 97bbc30bacf379a7458e5ecf5efe493e 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 9.7E-13 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 Gene3D G3DSA:3.20.190.10 2 129 3.6E-38 T 22-04-2016 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.134 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 Gene3D G3DSA:1.10.8.50 130 269 3.8E-47 T 22-04-2016 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.5E-24 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 SUPERFAMILY SSF81624 2 138 1.44E-41 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 2.7E-91 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 SMART SM01232 129 221 1.3E-41 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.0E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 SUPERFAMILY SSF46946 130 221 1.38E-27 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 SMART SM00898 2 115 8.0E-55 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 PANTHER PTHR22993:SF15 1 268 1.8E-125 T 22-04-2016 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.6E-31 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 PANTHER PTHR22993 1 268 1.8E-125 T 22-04-2016 VPUCM_RS00965 49c3ea76530838c95f3a11780b70c7de 269 SUPERFAMILY SSF57716 217 268 7.13E-16 T 22-04-2016 VPUCM_RS12545 f7299260080c911f6a7ff618fa1bc400 506 PANTHER PTHR26402:SF557 183 311 5.3E-34 T 22-04-2016 VPUCM_RS12545 f7299260080c911f6a7ff618fa1bc400 506 PANTHER PTHR26402:SF557 15 119 5.3E-34 T 22-04-2016 VPUCM_RS12545 f7299260080c911f6a7ff618fa1bc400 506 Gene3D G3DSA:1.10.10.10 16 113 1.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS12545 f7299260080c911f6a7ff618fa1bc400 506 PANTHER PTHR26402 183 311 5.3E-34 T 22-04-2016 VPUCM_RS12545 f7299260080c911f6a7ff618fa1bc400 506 PANTHER PTHR26402 15 119 5.3E-34 T 22-04-2016 VPUCM_RS12545 f7299260080c911f6a7ff618fa1bc400 506 SMART SM00862 31 111 6.0E-6 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS12545 f7299260080c911f6a7ff618fa1bc400 506 SUPERFAMILY SSF46894 9 112 7.37E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS12545 f7299260080c911f6a7ff618fa1bc400 506 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 2.3E-10 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:2.40.50.140 580 687 3.0E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF57770 147 181 4.19E-13 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.615 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF50249 583 687 1.86E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:3.40.50.620 188 384 2.0E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:3.40.50.620 11 149 2.0E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 PANTHER PTHR11946 11 643 2.4E-265 T 22-04-2016 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 5.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 PANTHER PTHR11946:SF86 11 643 2.4E-265 T 22-04-2016 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:1.10.730.10 385 539 1.8E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF47323 394 552 4.36E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 549 687 8.6E-47 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:2.20.28.20 150 181 3.2E-20 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF52374 10 146 9.98E-102 T 22-04-2016 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF52374 181 392 9.98E-102 T 22-04-2016 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 Pfam PF01588 Putative tRNA binding domain 593 685 6.0E-26 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 Pfam PF09334 tRNA synthetases class I (M) 14 401 4.2E-166 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10640 2c5687f25578b86879971a5a6456d94e 688 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 6.5E-202 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VPUCM_RS11095 cfe1f642503e4aa7ef81ae9383fe85c5 302 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 4.6E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily VPUCM_RS11095 cfe1f642503e4aa7ef81ae9383fe85c5 302 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 4.6E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily VPUCM_RS11095 cfe1f642503e4aa7ef81ae9383fe85c5 302 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 4.6E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily VPUCM_RS11095 cfe1f642503e4aa7ef81ae9383fe85c5 302 PANTHER PTHR10625:SF131 1 293 5.3E-123 T 22-04-2016 VPUCM_RS11095 cfe1f642503e4aa7ef81ae9383fe85c5 302 SUPERFAMILY SSF52768 2 287 3.02E-82 T 22-04-2016 VPUCM_RS11095 cfe1f642503e4aa7ef81ae9383fe85c5 302 Pfam PF00850 Histone deacetylase domain 26 282 1.4E-50 T 22-04-2016 IPR023801 Histone deacetylase domain VPUCM_RS11095 cfe1f642503e4aa7ef81ae9383fe85c5 302 PANTHER PTHR10625 1 293 5.3E-123 T 22-04-2016 IPR000286 Histone deacetylase superfamily VPUCM_RS11095 cfe1f642503e4aa7ef81ae9383fe85c5 302 Gene3D G3DSA:3.40.800.20 3 283 4.3E-66 T 22-04-2016 IPR023801 Histone deacetylase domain VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 Gene3D G3DSA:3.20.20.140 247 528 1.1E-18 T 22-04-2016 VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 Gene3D G3DSA:3.20.20.140 100 117 1.1E-18 T 22-04-2016 VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 PANTHER PTHR22642 36 581 1.4E-140 T 22-04-2016 VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 PANTHER PTHR22642:SF2 36 581 1.4E-140 T 22-04-2016 VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 Gene3D G3DSA:2.30.40.10 37 99 2.3E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 Gene3D G3DSA:2.30.40.10 537 580 2.3E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 SUPERFAMILY SSF51338 36 98 5.15E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 SUPERFAMILY SSF51338 537 579 5.15E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 SUPERFAMILY SSF51556 245 538 4.36E-22 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 SUPERFAMILY SSF51556 97 123 4.36E-22 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPUCM_RS03165 8ebb10f4843e560d020d7753c03a19a3 581 Pfam PF07969 Amidohydrolase family 86 578 4.5E-130 T 22-04-2016 IPR013108 Amidohydrolase 3 VPUCM_RS01385 8192b81505dd738e7264472a801d9a90 170 PANTHER PTHR33254 1 162 5.4E-106 T 22-04-2016 VPUCM_RS01385 8192b81505dd738e7264472a801d9a90 170 Pfam PF03737 Demethylmenaquinone methyltransferase 6 152 2.1E-39 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VPUCM_RS01385 8192b81505dd738e7264472a801d9a90 170 PANTHER PTHR33254:SF7 1 162 5.4E-106 T 22-04-2016 VPUCM_RS01385 8192b81505dd738e7264472a801d9a90 170 Gene3D G3DSA:3.50.30.40 1 158 4.0E-49 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VPUCM_RS01385 8192b81505dd738e7264472a801d9a90 170 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 9.3E-83 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VPUCM_RS01385 8192b81505dd738e7264472a801d9a90 170 SUPERFAMILY SSF89562 2 158 2.75E-47 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VPUCM_RS01385 8192b81505dd738e7264472a801d9a90 170 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.5E-68 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VPUCM_RS01385 8192b81505dd738e7264472a801d9a90 170 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.793 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 SMART SM00052 590 828 1.1E-26 T 22-04-2016 IPR001633 EAL domain VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 Gene3D G3DSA:3.30.70.270 415 546 1.3E-9 T 22-04-2016 VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 SMART SM01204 215 341 2.6E-17 T 22-04-2016 IPR019494 FIST, C-domain VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 SUPERFAMILY SSF141868 598 825 2.88E-54 T 22-04-2016 IPR001633 EAL domain VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 SUPERFAMILY SSF55073 419 526 3.45E-8 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 Pfam PF00563 EAL domain 598 824 5.7E-56 T 22-04-2016 IPR001633 EAL domain VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 Pfam PF10442 FIST C domain 215 338 4.1E-11 T 22-04-2016 IPR019494 FIST, C-domain VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 1.5E-6 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 SMART SM00897 27 214 2.6E-26 T 22-04-2016 IPR013702 FIST domain, N-terminal VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 PANTHER PTHR33121:SF10 598 827 4.3E-41 T 22-04-2016 VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 PANTHER PTHR33121 598 827 4.3E-41 T 22-04-2016 VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 Gene3D G3DSA:3.20.20.450 599 825 1.4E-53 T 22-04-2016 IPR001633 EAL domain VPUCM_RS15550 469f204043a8d0d0028d7aed0e16bc2e 828 Pfam PF08495 FIST N domain 30 212 1.2E-16 T 22-04-2016 IPR013702 FIST domain, N-terminal VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.409 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.5E-68 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 SUPERFAMILY SSF51998 64 124 1.01E-23 T 22-04-2016 VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 Pfam PF01228 Glycine radical 15 106 3.2E-23 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 Gene3D G3DSA:3.20.70.20 38 124 1.2E-33 T 22-04-2016 VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 PANTHER PTHR30191:SF5 1 125 4.0E-93 T 22-04-2016 VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 PANTHER PTHR30191 1 125 4.0E-93 T 22-04-2016 VPUCM_RS02450 585a6e7b730b25048f5e0ba0972f6488 125 PIRSF PIRSF000378 2 125 3.3E-54 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF54713 56 138 1.9E-18 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 3.7E-104 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF54713 142 278 1.22E-45 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 PANTHER PTHR11741 1 281 3.9E-125 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 76.638 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:1.10.286.20 181 225 1.5E-20 T 22-04-2016 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 Pfam PF00889 Elongation factor TS 71 261 6.9E-63 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 22-04-2016 IPR009060 UBA-like GO:0005515 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:3.30.479.20 226 264 6.5E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:3.30.479.20 57 93 6.5E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:3.30.479.20 165 180 6.5E-27 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VPUCM_RS04635 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:1.10.8.10 3 55 4.7E-26 T 22-04-2016 VPUCM_RS04390 b4e3024af77336ee473a1fc835560c8a 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 2.9E-47 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 VPUCM_RS04390 b4e3024af77336ee473a1fc835560c8a 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 139 4.0E-48 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VPUCM_RS04390 b4e3024af77336ee473a1fc835560c8a 142 SUPERFAMILY SSF82649 4 141 7.32E-50 T 22-04-2016 VPUCM_RS04390 b4e3024af77336ee473a1fc835560c8a 142 Gene3D G3DSA:3.90.1010.10 5 140 8.4E-55 T 22-04-2016 VPUCM_RS04390 b4e3024af77336ee473a1fc835560c8a 142 PANTHER PTHR12735:SF11 7 138 2.0E-50 T 22-04-2016 VPUCM_RS04390 b4e3024af77336ee473a1fc835560c8a 142 PANTHER PTHR12735 7 138 2.0E-50 T 22-04-2016 VPUCM_RS04155 348c09b52b72145ecbbd810c592ae798 154 Pfam PF07811 TadE-like protein 18 60 2.4E-10 T 22-04-2016 IPR012495 TadE-like VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.1140.32 108 207 2.2E-46 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 SMART SM00322 60 125 7.7E-8 T 22-04-2016 IPR004087 K Homology domain GO:0003676 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.529 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.5E-97 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.3E-40 T 22-04-2016 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 PANTHER PTHR11760 2 231 6.7E-143 T 22-04-2016 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.300.20 18 107 2.0E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF07650 KH domain 38 111 1.3E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 PANTHER PTHR11760:SF19 2 231 6.7E-143 T 22-04-2016 VPUCM_RS01460 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 Pfam PF08402 TOBE domain 292 371 2.6E-12 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 3.7E-156 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 Pfam PF00005 ABC transporter 35 174 3.2E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 PANTHER PTHR24220 19 318 1.3E-162 T 22-04-2016 VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 PANTHER PTHR24220:SF150 19 318 1.3E-162 T 22-04-2016 VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 SMART SM00382 42 225 4.6E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 SUPERFAMILY SSF52540 18 257 5.32E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 SUPERFAMILY SSF50331 250 372 6.23E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VPUCM_RS08110 05c0b1848381138747f13830cefe2e5c 377 Gene3D G3DSA:3.40.50.300 14 250 6.0E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 2.3E-174 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 2.4E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 3.9E-194 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 PANTHER PTHR15184:SF9 23 437 2.6E-227 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 SMART SM00382 158 342 4.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 SUPERFAMILY SSF52540 93 362 5.04E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 Gene3D G3DSA:3.40.50.300 94 359 5.3E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11585 78c416f069d4360c702facd26e043609 439 PANTHER PTHR15184 23 437 2.6E-227 T 22-04-2016 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF47831 24 143 8.37E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 PIRSF PIRSF000732 1 574 3.4E-218 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.1E-246 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.8E-32 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 6.9E-30 T 22-04-2016 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 6.9E-30 T 22-04-2016 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 6.9E-30 T 22-04-2016 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 6.9E-30 T 22-04-2016 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 2.3E-124 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF51621 249 549 3.14E-109 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 PANTHER PTHR22931 66 550 1.9E-213 T 22-04-2016 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:1.10.274.10 23 132 2.1E-37 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF52009 125 243 1.31E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:3.20.20.60 255 571 1.8E-113 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.0E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VPUCM_RS12070 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:3.50.30.10 133 254 2.9E-38 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS14095 20702248f5f0c8a00e5542f4de3b293d 199 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS14095 20702248f5f0c8a00e5542f4de3b293d 199 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 1.8E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS14095 20702248f5f0c8a00e5542f4de3b293d 199 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 2.4E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS14095 20702248f5f0c8a00e5542f4de3b293d 199 SUPERFAMILY SSF54523 7 82 1.26E-5 T 22-04-2016 VPUCM_RS01665 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 PANTHER PTHR10173 1 201 1.0E-99 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VPUCM_RS01665 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 PANTHER PTHR10173:SF36 1 201 1.0E-99 T 22-04-2016 VPUCM_RS01665 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 7.3E-69 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VPUCM_RS01665 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 SUPERFAMILY SSF55068 3 207 5.36E-81 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VPUCM_RS01665 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 2.1E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VPUCM_RS01665 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 Gene3D G3DSA:3.30.1060.10 4 197 1.8E-82 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VPUCM_RS01665 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.479 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 PIRSF PIRSF001435 1 211 4.6E-50 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 SMART SM00525 186 206 6.5E-6 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 PANTHER PTHR10359 1 212 1.1E-91 T 22-04-2016 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.217 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 Gene3D G3DSA:1.10.340.30 23 122 2.3E-33 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 SMART SM00478 38 185 5.7E-56 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 6.0E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 Gene3D G3DSA:1.10.1670.10 123 208 3.2E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.6E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.1E-88 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 PANTHER PTHR10359:SF18 1 212 1.1E-91 T 22-04-2016 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.2E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VPUCM_RS10985 372723b50e9d2ab701662cb72d265563 213 SUPERFAMILY SSF48150 2 207 3.3E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VPUCM_RS03805 50c252686c2a8ae92745422aa34b10ef 319 Pfam PF07728 AAA domain (dynein-related subfamily) 67 186 4.4E-19 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VPUCM_RS03805 50c252686c2a8ae92745422aa34b10ef 319 SUPERFAMILY SSF52540 32 284 3.32E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03805 50c252686c2a8ae92745422aa34b10ef 319 SMART SM00382 62 216 0.0028 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03805 50c252686c2a8ae92745422aa34b10ef 319 Gene3D G3DSA:3.40.50.300 38 237 1.6E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03805 50c252686c2a8ae92745422aa34b10ef 319 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 219 311 4.9E-23 T 22-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal VPUCM_RS03805 50c252686c2a8ae92745422aa34b10ef 319 PANTHER PTHR22908 295 313 1.4E-32 T 22-04-2016 VPUCM_RS03805 50c252686c2a8ae92745422aa34b10ef 319 PANTHER PTHR22908 54 278 1.4E-32 T 22-04-2016 VPUCM_RS03790 2328d58515521a7b131b9204d2357e05 139 Pfam PF00436 Single-strand binding protein family 3 107 4.6E-21 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VPUCM_RS03790 2328d58515521a7b131b9204d2357e05 139 PIRSF PIRSF002070 1 138 9.1E-23 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VPUCM_RS03790 2328d58515521a7b131b9204d2357e05 139 Gene3D G3DSA:2.40.50.140 1 136 2.2E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS03790 2328d58515521a7b131b9204d2357e05 139 PANTHER PTHR10302 1 138 3.8E-23 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VPUCM_RS03790 2328d58515521a7b131b9204d2357e05 139 Hamap MF_00984 Single-stranded DNA-binding protein. 2 113 22.448 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VPUCM_RS03790 2328d58515521a7b131b9204d2357e05 139 SUPERFAMILY SSF50249 1 129 2.74E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS03790 2328d58515521a7b131b9204d2357e05 139 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 121 9.8E-26 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VPUCM_RS08585 e06a91b849ae6652ca2068a2b73617c1 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 259 4.2E-46 T 22-04-2016 VPUCM_RS08585 e06a91b849ae6652ca2068a2b73617c1 298 PANTHER PTHR21631 3 296 1.9E-158 T 22-04-2016 VPUCM_RS08585 e06a91b849ae6652ca2068a2b73617c1 298 SUPERFAMILY SSF51621 5 294 1.44E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS08585 e06a91b849ae6652ca2068a2b73617c1 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 6.7E-127 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VPUCM_RS08585 e06a91b849ae6652ca2068a2b73617c1 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.521 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VPUCM_RS08585 e06a91b849ae6652ca2068a2b73617c1 298 Gene3D G3DSA:3.20.20.60 6 291 3.0E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS08585 e06a91b849ae6652ca2068a2b73617c1 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VPUCM_RS08585 e06a91b849ae6652ca2068a2b73617c1 298 PANTHER PTHR21631:SF4 3 296 1.9E-158 T 22-04-2016 VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 SMART SM00347 42 145 1.3E-29 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 3.2E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 3.2E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 3.2E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 3.2E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 Gene3D G3DSA:1.10.10.10 8 156 2.7E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 PANTHER PTHR33164:SF4 2 160 5.9E-38 T 22-04-2016 VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 SUPERFAMILY SSF46785 10 156 6.39E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 Pfam PF01047 MarR family 50 110 1.1E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site VPUCM_RS09150 a2e4fcdb219bec13c72a1da2a112793f 160 PANTHER PTHR33164 2 160 5.9E-38 T 22-04-2016 VPUCM_RS09010 176eee17d8e3a03db157d58e16b76802 211 SUPERFAMILY SSF48452 50 181 2.28E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS09010 176eee17d8e3a03db157d58e16b76802 211 Gene3D G3DSA:1.25.40.10 34 189 1.3E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS09010 176eee17d8e3a03db157d58e16b76802 211 Pfam PF13181 Tetratricopeptide repeat 137 155 0.034 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS13335 b2b7e71e22f415dc81765e5f53726861 156 PIRSF PIRSF004923 1 156 2.3E-38 T 22-04-2016 IPR026268 Protein RseC VPUCM_RS13335 b2b7e71e22f415dc81765e5f53726861 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 149 8.6E-32 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC VPUCM_RS13335 b2b7e71e22f415dc81765e5f53726861 156 PANTHER PTHR35867 6 155 1.3E-28 T 22-04-2016 VPUCM_RS13335 b2b7e71e22f415dc81765e5f53726861 156 PANTHER PTHR35867:SF1 6 155 1.3E-28 T 22-04-2016 VPUCM_RS02790 0e9d1278d18251e4f9c7a9206755ddcc 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.2E-38 T 22-04-2016 IPR015017 Protein of unknown function DUF1904 VPUCM_RS02790 0e9d1278d18251e4f9c7a9206755ddcc 110 SUPERFAMILY SSF55331 1 110 7.32E-38 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily VPUCM_RS02790 0e9d1278d18251e4f9c7a9206755ddcc 110 Gene3D G3DSA:3.30.429.10 1 110 2.5E-46 T 22-04-2016 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 Gene3D G3DSA:1.10.1040.10 196 338 1.8E-58 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.107 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 SUPERFAMILY SSF51735 16 190 3.38E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 1.3E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 SUPERFAMILY SSF48179 191 343 1.7E-56 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PIRSF PIRSF000114 10 344 1.7E-95 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PANTHER PTHR11728 3 343 1.9E-135 T 22-04-2016 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 9.8E-47 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 Gene3D G3DSA:3.40.50.720 8 195 7.4E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 3.9E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VPUCM_RS14840 941e51821aeb7ceccfcb15fc5236f59b 345 PANTHER PTHR11728:SF1 3 343 1.9E-135 T 22-04-2016 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.9E-14 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 PIRSF PIRSF005784 3 188 4.8E-87 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 SUPERFAMILY SSF54862 37 173 9.43E-31 T 22-04-2016 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 43.331 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 Gene3D G3DSA:3.30.70.20 120 175 5.4E-17 T 22-04-2016 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 7.2E-18 T 22-04-2016 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 PANTHER PTHR11938 1 183 1.5E-94 T 22-04-2016 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 PANTHER PTHR11938:SF64 1 183 1.5E-94 T 22-04-2016 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 1.8E-87 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 VPUCM_RS10960 9672446e5b09e0a5effd7972ed8b3d90 198 Gene3D G3DSA:1.10.1060.10 41 119 4.1E-6 T 22-04-2016 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PANTHER PTHR11616 1 474 6.0E-181 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 2.0E-39 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 462 1.2E-76 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 SUPERFAMILY SSF161070 3 475 4.97E-148 T 22-04-2016 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 2.8E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10515 1d8c6f1eab984689b90c82099e36a25c 488 PANTHER PTHR11616:SF11 1 474 6.0E-181 T 22-04-2016 VPUCM_RS01280 4d674c747e59af7d1d57436a5512cdc4 310 Gene3D G3DSA:3.10.580.10 192 309 4.9E-22 T 22-04-2016 VPUCM_RS01280 4d674c747e59af7d1d57436a5512cdc4 310 PANTHER PTHR38418 28 253 1.0E-39 T 22-04-2016 VPUCM_RS01280 4d674c747e59af7d1d57436a5512cdc4 310 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 42 308 2.4E-101 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VPUCM_RS01280 4d674c747e59af7d1d57436a5512cdc4 310 PIRSF PIRSF004692 1 310 1.1E-122 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VPUCM_RS01280 4d674c747e59af7d1d57436a5512cdc4 310 Pfam PF01380 SIS domain 38 168 3.3E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VPUCM_RS01280 4d674c747e59af7d1d57436a5512cdc4 310 SUPERFAMILY SSF53697 4 253 8.9E-60 T 22-04-2016 VPUCM_RS01280 4d674c747e59af7d1d57436a5512cdc4 310 Gene3D G3DSA:3.40.50.10490 6 191 7.3E-51 T 22-04-2016 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 PANTHER PTHR32234 12 152 8.1E-224 T 22-04-2016 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 PANTHER PTHR32234 185 612 8.1E-224 T 22-04-2016 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 PANTHER PTHR32234:SF0 12 152 8.1E-224 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 PANTHER PTHR32234:SF0 185 612 8.1E-224 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 SUPERFAMILY SSF52833 510 611 4.33E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 222 422 5.0E-18 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 Pfam PF13899 Thioredoxin-like 503 567 3.7E-13 T 22-04-2016 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 613 38.426 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 SUPERFAMILY SSF74863 39 153 3.4E-40 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 Gene3D G3DSA:2.60.40.1250 36 154 1.9E-41 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 ProSitePatterns PS00194 Thioredoxin family active site. 522 540 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 Pfam PF11412 Disulphide bond corrector protein DsbC 41 151 7.2E-29 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VPUCM_RS14995 752e87dc2f2f1519415cbce9b7c8ce3a 613 Gene3D G3DSA:3.40.30.10 501 612 1.1E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 Gene3D G3DSA:3.30.70.920 56 140 1.7E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 PANTHER PTHR30154:SF17 1 154 6.5E-90 T 22-04-2016 VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.6E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.6E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.6E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 PANTHER PTHR30154 1 154 6.5E-90 T 22-04-2016 VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 SUPERFAMILY SSF54909 63 152 1.57E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 SUPERFAMILY SSF46785 2 61 1.55E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.7E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.0E-17 T 22-04-2016 VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 SMART SM00344 3 112 6.5E-44 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VPUCM_RS05295 6fc3c087ea031cc4346dd48d5d34b5ec 154 Gene3D G3DSA:1.10.10.10 4 55 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 PANTHER PTHR11702:SF3 1 378 5.5E-182 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 SUPERFAMILY SSF82051 2 157 3.4E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 6.5E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 Gene3D G3DSA:3.40.50.300 160 342 2.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 Gene3D G3DSA:2.70.210.12 2 156 1.5E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.4E-143 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 PIRSF PIRSF002401 1 375 4.7E-137 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.059 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 PANTHER PTHR11702 1 378 5.5E-182 T 22-04-2016 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 Pfam PF01018 GTP1/OBG 3 156 1.8E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VPUCM_RS01770 dec8d8780046449d053d2daa4f49e6f3 390 SUPERFAMILY SSF52540 151 340 1.13E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 Gene3D G3DSA:3.20.20.450 595 844 1.9E-85 T 22-04-2016 IPR001633 EAL domain VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 Gene3D G3DSA:3.30.450.20 84 219 7.4E-22 T 22-04-2016 VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 Pfam PF00563 EAL domain 600 834 1.8E-68 T 22-04-2016 IPR001633 EAL domain VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 SUPERFAMILY SSF55073 432 584 1.96E-32 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 Pfam PF00672 HAMP domain 349 417 1.7E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 573 3.7E-24 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 SMART SM00304 368 421 1.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 Pfam PF02743 Cache domain 47 264 6.4E-24 T 22-04-2016 IPR033479 Double Cache domain 1 VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 574 1.2E-28 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 PANTHER PTHR33121:SF13 479 848 1.9E-81 T 22-04-2016 VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 SMART SM00267 416 582 1.6E-30 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 SMART SM00052 592 839 1.2E-98 T 22-04-2016 IPR001633 EAL domain VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 SUPERFAMILY SSF141868 600 846 1.44E-80 T 22-04-2016 IPR001633 EAL domain VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 SUPERFAMILY SSF158472 369 418 2.48E-8 T 22-04-2016 VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 PANTHER PTHR33121 479 848 1.9E-81 T 22-04-2016 VPUCM_RS00585 974f347e0a85912b1c937ed376c9f5d8 848 Gene3D G3DSA:3.30.70.270 429 587 1.4E-33 T 22-04-2016 VPUCM_RS01400 5fe094ac046cb839037b65304aaf627b 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.6E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VPUCM_RS01400 5fe094ac046cb839037b65304aaf627b 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.13 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VPUCM_RS01400 5fe094ac046cb839037b65304aaf627b 183 SUPERFAMILY SSF56235 2 172 6.92E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS01400 5fe094ac046cb839037b65304aaf627b 183 PIRSF PIRSF039093 1 175 1.2E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VPUCM_RS01400 5fe094ac046cb839037b65304aaf627b 183 Gene3D G3DSA:3.60.20.10 2 173 1.1E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS01400 5fe094ac046cb839037b65304aaf627b 183 Pfam PF00227 Proteasome subunit 2 169 8.0E-24 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 VPUCM_RS01400 5fe094ac046cb839037b65304aaf627b 183 PANTHER PTHR32194 2 177 5.5E-127 T 22-04-2016 VPUCM_RS00805 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS00805 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 8.8E-18 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS00805 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS00805 aa5786e3bf1f603ececde4a6f8a5238f 90 PANTHER PTHR34476 2 90 2.4E-29 T 22-04-2016 VPUCM_RS00805 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS00805 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 77 4.2E-17 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS00805 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS03490 30aaa3f52c102164b6d046530f5c4d03 132 Pfam PF03603 DNA polymerase III psi subunit 4 130 6.5E-39 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03490 30aaa3f52c102164b6d046530f5c4d03 132 SUPERFAMILY SSF102220 30 131 1.18E-31 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03490 30aaa3f52c102164b6d046530f5c4d03 132 Gene3D G3DSA:3.40.50.10220 31 131 2.0E-38 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03490 30aaa3f52c102164b6d046530f5c4d03 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 128 4.0E-5 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS03490 30aaa3f52c102164b6d046530f5c4d03 132 PIRSF PIRSF029225 2 132 1.8E-47 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1152 13.415 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 PANTHER PTHR30591 1 1161 0.0 T 22-04-2016 VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 SUPERFAMILY SSF52980 838 1145 5.36E-76 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 PANTHER PTHR30591:SF1 1 1161 0.0 T 22-04-2016 VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 SUPERFAMILY SSF52540 363 815 5.93E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1122 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 Gene3D G3DSA:1.10.10.160 86 179 1.1E-35 T 22-04-2016 IPR013986 DExx box DNA helicase domain VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 22-04-2016 VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 SUPERFAMILY SSF52540 2 351 1.06E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 PIRSF PIRSF000980 1 1161 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 Gene3D G3DSA:3.40.50.300 662 758 8.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04340 c298e32b846a1003db7b8b4442a650ef 1163 Gene3D G3DSA:3.40.50.300 352 456 8.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 1.5E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 SUPERFAMILY SSF47413 1 51 1.22E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:3.40.50.2300 76 165 1.4E-5 T 22-04-2016 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 PANTHER PTHR30146:SF28 1 328 1.5E-155 T 22-04-2016 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 SMART SM00354 1 74 1.8E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:3.40.50.2300 166 328 2.7E-44 T 22-04-2016 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 PANTHER PTHR30146 1 328 1.5E-155 T 22-04-2016 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:1.10.260.40 1 48 4.1E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 5.5E-31 T 22-04-2016 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 SUPERFAMILY SSF53822 77 324 2.75E-43 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04220 c910eb7fa1a786e630be6a0af4edfd6e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Gene3D G3DSA:2.120.10.90 530 838 4.2E-141 T 22-04-2016 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 PANTHER PTHR10169:SF48 2 417 0.0 T 22-04-2016 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 PANTHER PTHR10169:SF48 449 811 0.0 T 22-04-2016 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.6E-158 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 SUPERFAMILY SSF56719 30 520 2.75E-188 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 SMART SM00434 11 498 0.0 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Gene3D G3DSA:3.30.1360.40 236 332 1.8E-40 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 842 30.251 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Gene3D G3DSA:1.10.268.10 362 496 5.0E-51 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 SUPERFAMILY SSF101904 532 851 5.89E-114 T 22-04-2016 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 6.2E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.2E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 8.2E-16 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 4.8E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.8E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 PANTHER PTHR10169 2 417 0.0 T 22-04-2016 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 PANTHER PTHR10169 449 811 0.0 T 22-04-2016 VPUCM_RS06490 1ea188eb398e321723c40f97d6be20f1 878 Gene3D G3DSA:3.90.199.10 34 216 1.2E-85 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VPUCM_RS06055 3e71c1d09b51f629af0e9308d2e525e8 418 PIRSF PIRSF003085 24 418 4.6E-120 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VPUCM_RS06055 3e71c1d09b51f629af0e9308d2e525e8 418 PANTHER PTHR10108:SF795 73 331 2.9E-112 T 22-04-2016 VPUCM_RS06055 3e71c1d09b51f629af0e9308d2e525e8 418 PANTHER PTHR10108:SF795 349 418 2.9E-112 T 22-04-2016 VPUCM_RS06055 3e71c1d09b51f629af0e9308d2e525e8 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 1.0E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06055 3e71c1d09b51f629af0e9308d2e525e8 418 Gene3D G3DSA:3.40.50.150 139 417 8.8E-97 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06055 3e71c1d09b51f629af0e9308d2e525e8 418 SUPERFAMILY SSF53335 21 371 6.69E-90 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06055 3e71c1d09b51f629af0e9308d2e525e8 418 PANTHER PTHR10108 73 331 2.9E-112 T 22-04-2016 VPUCM_RS06055 3e71c1d09b51f629af0e9308d2e525e8 418 PANTHER PTHR10108 349 418 2.9E-112 T 22-04-2016 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 PANTHER PTHR22595 34 358 2.9E-148 T 22-04-2016 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 Gene3D G3DSA:1.10.530.10 211 349 1.1E-54 T 22-04-2016 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 Gene3D G3DSA:1.10.530.10 87 154 1.1E-54 T 22-04-2016 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 PANTHER PTHR22595:SF49 34 358 2.9E-148 T 22-04-2016 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 SUPERFAMILY SSF51055 430 479 1.22E-16 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 SUPERFAMILY SSF53955 87 350 1.94E-53 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 Pfam PF00182 Chitinase class I 106 325 4.7E-30 T 22-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 Gene3D G3DSA:2.10.10.20 433 479 2.1E-20 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 Pfam PF02839 Carbohydrate binding domain 437 475 1.5E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 SMART SM00495 436 478 1.2E-17 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS03125 45146a9cd321e99eb7374932afc6d260 560 SMART SM00495 512 557 1.5 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 Pfam PF01026 TatD related DNase 3 253 6.0E-80 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 Gene3D G3DSA:3.20.20.140 1 253 1.2E-89 T 22-04-2016 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.4E-95 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 PANTHER PTHR10060:SF20 1 253 2.3E-127 T 22-04-2016 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 PIRSF PIRSF005902 1 255 2.1E-83 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 PANTHER PTHR10060 1 253 2.3E-127 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS10530 312026818a8edbfe369cc752c56f52b5 255 SUPERFAMILY SSF51556 1 253 2.14E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 PANTHER PTHR11817 1 464 4.5E-255 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF52935 323 469 2.88E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.6E-155 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF50800 70 167 2.97E-29 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:2.40.33.10 73 168 1.9E-32 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 4.8E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.40.1380.20 327 468 1.1E-43 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.20.20.60 2 72 1.3E-118 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.20.20.60 169 326 1.3E-118 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.5E-188 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF51621 1 74 4.19E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS01895 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF51621 156 339 4.19E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 PANTHER PTHR21237 27 177 3.5E-59 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 Gene3D G3DSA:3.90.20.20 27 116 7.9E-27 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 SUPERFAMILY SSF58014 27 118 1.44E-23 T 22-04-2016 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 PRINTS PR00773 GrpE protein signature 153 172 6.2E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 PRINTS PR00773 GrpE protein signature 126 141 6.2E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 PRINTS PR00773 GrpE protein signature 72 87 6.2E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 PRINTS PR00773 GrpE protein signature 44 60 6.2E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 Hamap MF_01151 Protein GrpE [grpE]. 2 174 19.256 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 Pfam PF01025 GrpE 18 174 1.0E-50 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 Gene3D G3DSA:2.30.22.10 118 176 3.2E-24 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 ProSitePatterns PS01071 grpE protein signature. 129 172 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VPUCM_RS03905 e2631d73cebd87781c8cc620def1a57f 186 SUPERFAMILY SSF51064 119 176 3.01E-19 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 Gene3D G3DSA:2.30.38.10 439 516 6.1E-7 T 22-04-2016 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 5.8E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 Gene3D G3DSA:3.40.50.980 80 266 1.1E-43 T 22-04-2016 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 SUPERFAMILY SSF56801 9 644 2.09E-182 T 22-04-2016 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 Gene3D G3DSA:3.30.300.30 519 639 1.1E-27 T 22-04-2016 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 Gene3D G3DSA:3.40.50.980 267 427 1.4E-26 T 22-04-2016 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 PANTHER PTHR24095 6 648 0.0 T 22-04-2016 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 PANTHER PTHR24095:SF178 6 648 0.0 T 22-04-2016 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-20 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 Pfam PF00501 AMP-binding enzyme 84 523 7.0E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS15055 1acf919d63f30d7798950d4ca9a72fa2 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.423 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 7.1E-101 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 PANTHER PTHR31689 1 275 9.4E-143 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 Gene3D G3DSA:3.10.310.10 4 122 1.6E-49 T 22-04-2016 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 PANTHER PTHR31689:SF0 1 275 9.4E-143 T 22-04-2016 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 Pfam PF01678 Diaminopimelate epimerase 154 269 2.3E-31 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 Pfam PF01678 Diaminopimelate epimerase 5 124 2.0E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.482 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 Gene3D G3DSA:3.10.310.10 123 264 4.6E-52 T 22-04-2016 VPUCM_RS15570 cd4a6e89a441aeda026dbcfb99f77dc8 276 SUPERFAMILY SSF54506 2 274 1.26E-52 T 22-04-2016 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 4.2E-114 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 PANTHER PTHR10909:SF283 32 474 1.3E-239 T 22-04-2016 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 Gene3D G3DSA:1.20.140.10 290 448 4.3E-22 T 22-04-2016 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 1.9E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 3.1E-9 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 SUPERFAMILY SSF56645 61 296 1.96E-47 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 SUPERFAMILY SSF47203 301 453 1.26E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.7E-8 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 Gene3D G3DSA:2.40.110.10 178 289 6.0E-18 T 22-04-2016 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 Gene3D G3DSA:1.10.540.10 63 171 3.6E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VPUCM_RS09870 3b92fea79966390fc5a1c455d55fc957 760 PANTHER PTHR10909 32 474 1.3E-239 T 22-04-2016 VPUCM_RS08735 70c237eb47408de11f1045a5eee41562 312 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 146 4.4E-7 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 VPUCM_RS08735 70c237eb47408de11f1045a5eee41562 312 Gene3D G3DSA:3.40.50.1820 4 312 2.4E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS08735 70c237eb47408de11f1045a5eee41562 312 PANTHER PTHR17630:SF49 1 312 9.7E-46 T 22-04-2016 VPUCM_RS08735 70c237eb47408de11f1045a5eee41562 312 SUPERFAMILY SSF53474 3 143 4.5E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS08735 70c237eb47408de11f1045a5eee41562 312 SUPERFAMILY SSF53474 177 206 4.5E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS08735 70c237eb47408de11f1045a5eee41562 312 SUPERFAMILY SSF53474 233 312 4.5E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS08735 70c237eb47408de11f1045a5eee41562 312 PANTHER PTHR17630 1 312 9.7E-46 T 22-04-2016 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 SUPERFAMILY SSF51905 1 54 4.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 SUPERFAMILY SSF51905 360 416 4.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 SUPERFAMILY SSF51905 107 270 4.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 Pfam PF01266 FAD dependent oxidoreductase 3 397 3.7E-67 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 Gene3D G3DSA:3.30.9.10 270 359 2.6E-16 T 22-04-2016 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 Gene3D G3DSA:3.30.9.10 134 190 2.6E-16 T 22-04-2016 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.213 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 Gene3D G3DSA:3.50.50.60 108 130 1.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 Gene3D G3DSA:3.50.50.60 360 416 1.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 Gene3D G3DSA:3.50.50.60 191 269 1.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 Gene3D G3DSA:3.50.50.60 1 58 1.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 PANTHER PTHR13847:SF148 1 63 1.1E-210 T 22-04-2016 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 PANTHER PTHR13847:SF148 107 418 1.1E-210 T 22-04-2016 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 PANTHER PTHR13847 1 63 1.1E-210 T 22-04-2016 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 PANTHER PTHR13847 107 418 1.1E-210 T 22-04-2016 VPUCM_RS03145 433a8c22d7ab4d43651b2a9c10d7247f 418 SUPERFAMILY SSF54373 270 360 1.29E-17 T 22-04-2016 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 127 400 65.29 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 Gene3D G3DSA:3.40.50.300 196 400 2.9E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 Pfam PF00448 SRP54-type protein, GTPase domain 200 399 1.9E-77 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 SUPERFAMILY SSF52540 197 400 3.54E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 SMART SM00962 199 400 3.6E-124 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 PANTHER PTHR11564 94 403 4.8E-152 T 22-04-2016 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 Gene3D G3DSA:1.20.120.140 90 180 6.8E-34 T 22-04-2016 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 Pfam PF02881 SRP54-type protein, helical bundle domain 119 180 1.6E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 SMART SM00963 104 184 2.7E-27 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 373 386 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 SMART SM00382 198 390 9.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 127 399 2.4E-115 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 PANTHER PTHR11564:SF16 94 403 4.8E-152 T 22-04-2016 VPUCM_RS15435 3dd208bf7abf27c99cc43e9eac0eacbd 403 SUPERFAMILY SSF47364 99 178 1.57E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VPUCM_RS07860 a391712a048aecbc1c6db779335193f9 194 Gene3D G3DSA:3.40.50.360 1 193 3.6E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS07860 a391712a048aecbc1c6db779335193f9 194 SUPERFAMILY SSF52218 1 192 4.03E-50 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS07860 a391712a048aecbc1c6db779335193f9 194 Pfam PF02525 Flavodoxin-like fold 3 189 3.0E-43 T 22-04-2016 IPR003680 Flavodoxin-like fold VPUCM_RS07860 a391712a048aecbc1c6db779335193f9 194 PANTHER PTHR10204 1 194 4.6E-88 T 22-04-2016 VPUCM_RS07860 a391712a048aecbc1c6db779335193f9 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.768 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 VPUCM_RS07860 a391712a048aecbc1c6db779335193f9 194 PANTHER PTHR10204:SF16 1 194 4.6E-88 T 22-04-2016 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.0E-134 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 SUPERFAMILY SSF160544 250 355 6.54E-40 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 Gene3D G3DSA:3.40.1690.10 218 357 1.2E-62 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 PANTHER PTHR30531 1 361 3.3E-238 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.6E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 7.5E-122 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS11535 25104c3e138f429defc630319c24c804 376 PANTHER PTHR30531:SF4 1 361 3.3E-238 T 22-04-2016 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 SUPERFAMILY SSF82714 711 793 6.28E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 PANTHER PTHR32063:SF31 1 1029 0.0 T 22-04-2016 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 Gene3D G3DSA:3.30.2090.10 712 792 4.8E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 SUPERFAMILY SSF82714 184 263 2.09E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 PANTHER PTHR32063 1 1029 0.0 T 22-04-2016 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 Pfam PF00873 AcrB/AcrD/AcrF family 5 1026 1.1E-174 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 Gene3D G3DSA:1.10.3850.10 800 1026 6.3E-57 T 22-04-2016 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 Gene3D G3DSA:3.30.2090.10 185 263 3.6E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 SUPERFAMILY SSF82693 41 133 2.62E-23 T 22-04-2016 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 Gene3D G3DSA:3.30.70.1430 41 137 1.7E-25 T 22-04-2016 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 SUPERFAMILY SSF82866 793 1029 3.14E-49 T 22-04-2016 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.1E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.1E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 5.1E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.1E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.1E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 5.1E-28 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 SUPERFAMILY SSF82866 289 490 1.96E-41 T 22-04-2016 VPUCM_RS12795 c583d1917ceab49c8dbcebc207e91e1d 1043 Gene3D G3DSA:1.20.1640.10 284 500 2.3E-51 T 22-04-2016 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 SUPERFAMILY SSF52172 2 109 7.83E-27 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 SMART SM00448 3 126 1.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 Pfam PF01339 CheB methylesterase 184 361 3.6E-58 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 PANTHER PTHR24421:SF16 1 366 3.4E-171 T 22-04-2016 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 Pfam PF00072 Response regulator receiver domain 5 109 1.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 PANTHER PTHR24421 1 366 3.4E-171 T 22-04-2016 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 Gene3D G3DSA:3.40.50.180 176 363 4.3E-72 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 367 38.777 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 PIRSF PIRSF000876 1 367 2.0E-127 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 SUPERFAMILY SSF52738 178 363 1.7E-62 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VPUCM_RS11495 6170aa939449cf921b38d33e8bcd287c 369 Gene3D G3DSA:3.40.50.2300 2 109 3.6E-30 T 22-04-2016 VPUCM_RS06295 3df73cd9f8476fdb90ce31edcabf243f 187 Pfam PF04279 Intracellular septation protein A 1 174 1.5E-66 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VPUCM_RS06295 3df73cd9f8476fdb90ce31edcabf243f 187 PANTHER PTHR36917 1 185 7.1E-70 T 22-04-2016 VPUCM_RS06295 3df73cd9f8476fdb90ce31edcabf243f 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 1.3E-62 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VPUCM_RS06295 3df73cd9f8476fdb90ce31edcabf243f 187 PANTHER PTHR36917:SF1 1 185 7.1E-70 T 22-04-2016 VPUCM_RS06295 3df73cd9f8476fdb90ce31edcabf243f 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.39 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VPUCM_RS11375 7fc4a36b336ad2d9db81a215acc3abe1 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.373 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 VPUCM_RS11375 7fc4a36b336ad2d9db81a215acc3abe1 176 PANTHER PTHR35562 1 175 1.4E-102 T 22-04-2016 VPUCM_RS11375 7fc4a36b336ad2d9db81a215acc3abe1 176 PANTHER PTHR35562:SF1 1 175 1.4E-102 T 22-04-2016 VPUCM_RS11375 7fc4a36b336ad2d9db81a215acc3abe1 176 SUPERFAMILY SSF160443 95 171 2.48E-11 T 22-04-2016 IPR002625 Smr domain VPUCM_RS11375 7fc4a36b336ad2d9db81a215acc3abe1 176 SMART SM00463 94 172 1.5E-15 T 22-04-2016 IPR002625 Smr domain VPUCM_RS11375 7fc4a36b336ad2d9db81a215acc3abe1 176 Pfam PF01713 Smr domain 97 171 2.5E-17 T 22-04-2016 IPR002625 Smr domain VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 Gene3D G3DSA:3.90.190.10 84 232 1.8E-26 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 SUPERFAMILY SSF111331 241 544 8.34E-55 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 SMART SM00195 90 232 3.0E-14 T 22-04-2016 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 SMART SM00404 135 231 6.9E-4 T 22-04-2016 IPR003595 Protein-tyrosine phosphatase, catalytic VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 SMART SM00046 240 363 4.3E-5 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 PANTHER PTHR12358 67 544 2.2E-37 T 22-04-2016 VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 Pfam PF00781 Diacylglycerol kinase catalytic domain 242 365 6.1E-28 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 PANTHER PTHR12358:SF43 67 544 2.2E-37 T 22-04-2016 VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 Pfam PF00782 Dual specificity phosphatase, catalytic domain 107 229 2.4E-17 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 SUPERFAMILY SSF52799 84 227 1.02E-27 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VPUCM_RS00445 a15f01d29157b0b19c67a921a0d49848 545 Gene3D G3DSA:3.40.50.10330 259 356 2.0E-6 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 PANTHER PTHR32089 230 482 1.4E-44 T 22-04-2016 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 295 473 6.8E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 SMART SM00283 244 477 7.9E-39 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 1.5E-26 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 1.5E-26 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 1.5E-26 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 1.5E-26 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 Gene3D G3DSA:1.10.287.950 245 453 1.8E-43 T 22-04-2016 VPUCM_RS10740 7e72edcf07a3bd1fb32ee3138deb48db 483 SUPERFAMILY SSF58104 242 479 1.96E-46 T 22-04-2016 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 476 568 6.7E-21 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.0E-161 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 Gene3D G3DSA:3.40.1670.10 479 583 2.7E-32 T 22-04-2016 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 Gene3D G3DSA:3.40.1670.10 337 453 3.5E-51 T 22-04-2016 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 SUPERFAMILY SSF50475 3 322 2.75E-122 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 PANTHER PTHR30108:SF1 1 478 1.6E-246 T 22-04-2016 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 SUPERFAMILY SSF143968 323 466 3.4E-53 T 22-04-2016 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 Gene3D G3DSA:1.20.5.570 584 617 9.3E-18 T 22-04-2016 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 2.2E-165 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 PANTHER PTHR30108 1 478 1.6E-246 T 22-04-2016 VPUCM_RS15640 4dc2442d89ced8d1181ba3cc642aa39d 617 SUPERFAMILY SSF143968 475 615 2.09E-36 T 22-04-2016 VPUCM_RS03685 156d53252434d0765bdd32c5ae8019e5 368 PANTHER PTHR10245 1 278 2.6E-22 T 22-04-2016 VPUCM_RS03685 156d53252434d0765bdd32c5ae8019e5 368 PANTHER PTHR10245:SF22 1 278 2.6E-22 T 22-04-2016 VPUCM_RS03685 156d53252434d0765bdd32c5ae8019e5 368 Pfam PF12844 Helix-turn-helix domain 7 69 3.1E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS03685 156d53252434d0765bdd32c5ae8019e5 368 Pfam PF06114 Domain of unknown function (DUF955) 173 277 6.1E-12 T 22-04-2016 IPR010359 HTH domain, IrrE-type VPUCM_RS03685 156d53252434d0765bdd32c5ae8019e5 368 SMART SM00530 9 64 1.2E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS03685 156d53252434d0765bdd32c5ae8019e5 368 SUPERFAMILY SSF47413 2 70 2.42E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS03685 156d53252434d0765bdd32c5ae8019e5 368 Gene3D G3DSA:1.10.260.40 3 71 6.1E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 3.2E-266 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.827 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 Gene3D G3DSA:3.30.499.10 2 158 2.5E-23 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PANTHER PTHR11670:SF38 327 471 2.7E-269 T 22-04-2016 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PANTHER PTHR11670:SF38 1 307 2.7E-269 T 22-04-2016 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 343 354 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 82 95 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 133 148 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 195 208 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 119 132 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 108 116 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 286 300 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 209 222 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PRINTS PR00415 Aconitase family signature 399 412 9.7E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 Gene3D G3DSA:3.40.1060.10 166 280 3.7E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 Gene3D G3DSA:3.30.499.10 317 468 1.2E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 6.6E-156 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PANTHER PTHR11670 327 471 2.7E-269 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 PANTHER PTHR11670 1 307 2.7E-269 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 SUPERFAMILY SSF53732 1 466 1.57E-165 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS01835 297d04f2f2338fc3366191fc2bdcf0ca 471 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 Gene3D G3DSA:1.20.1250.20 205 376 2.2E-15 T 22-04-2016 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 Gene3D G3DSA:1.20.1250.20 5 184 2.4E-28 T 22-04-2016 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 PANTHER PTHR23501 1 372 5.7E-44 T 22-04-2016 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 PRINTS PR01035 Tetracycline resistance protein signature 39 58 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 PRINTS PR01035 Tetracycline resistance protein signature 127 149 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 PRINTS PR01035 Tetracycline resistance protein signature 97 118 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 PRINTS PR01035 Tetracycline resistance protein signature 293 313 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 PRINTS PR01035 Tetracycline resistance protein signature 237 257 6.9E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 Pfam PF07690 Major Facilitator Superfamily 7 341 4.4E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS15090 169e2041cf6f6709bfaeaea2453173e8 385 SUPERFAMILY SSF103473 5 372 1.57E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 PIRSF PIRSF500176 2 333 2.8E-108 T 22-04-2016 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 PANTHER PTHR11707:SF31 1 336 7.9E-249 T 22-04-2016 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 SMART SM00870 5 324 1.9E-139 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 PANTHER PTHR11707 1 336 7.9E-249 T 22-04-2016 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 Gene3D G3DSA:3.40.50.40 212 336 2.9E-48 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 3.9E-116 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 PIRSF PIRSF001220 1 335 2.1E-94 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 SUPERFAMILY SSF53774 3 336 2.49E-114 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 Gene3D G3DSA:3.40.50.1170 4 206 4.1E-81 T 22-04-2016 IPR027474 L-asparaginase, N-terminal VPUCM_RS11130 0069fe2006549ef00f02e9c1db61053e 337 Pfam PF00710 Asparaginase, N-terminal 5 191 8.2E-67 T 22-04-2016 IPR027474 L-asparaginase, N-terminal VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 PANTHER PTHR30520 1 227 5.1E-99 T 22-04-2016 VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 PANTHER PTHR30520 244 279 5.1E-99 T 22-04-2016 VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 4.6E-77 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 Gene3D G3DSA:1.20.1080.10 29 279 9.8E-86 T 22-04-2016 IPR023271 Aquaporin-like VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 1.4E-112 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 PANTHER PTHR30520:SF4 1 227 5.1E-99 T 22-04-2016 VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 PANTHER PTHR30520:SF4 244 279 5.1E-99 T 22-04-2016 VPUCM_RS10230 9af22c491775b0f0c633e43a12f5e55b 286 Pfam PF01226 Formate/nitrite transporter 14 275 1.3E-73 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VPUCM_RS03825 a85cdc46f65d7a0ad4be26f28e08d3b8 551 Pfam PF00092 von Willebrand factor type A domain 381 519 1.9E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A VPUCM_RS03825 a85cdc46f65d7a0ad4be26f28e08d3b8 551 Gene3D G3DSA:3.40.50.410 380 522 1.3E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A VPUCM_RS03825 a85cdc46f65d7a0ad4be26f28e08d3b8 551 Pfam PF06213 Cobalamin biosynthesis protein CobT 4 261 3.9E-12 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 VPUCM_RS03825 a85cdc46f65d7a0ad4be26f28e08d3b8 551 SMART SM00327 376 549 1.8E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A VPUCM_RS03825 a85cdc46f65d7a0ad4be26f28e08d3b8 551 SUPERFAMILY SSF53300 377 537 1.36E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 SUPERFAMILY SSF141868 147 292 2.88E-38 T 22-04-2016 IPR001633 EAL domain VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1 127 4.6E-36 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 Gene3D G3DSA:3.20.20.450 148 292 3.3E-40 T 22-04-2016 IPR001633 EAL domain VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 Gene3D G3DSA:3.30.70.270 1 136 7.8E-45 T 22-04-2016 VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 PANTHER PTHR10799:SF710 1 241 2.3E-66 T 22-04-2016 VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 SMART SM00267 1 131 6.8E-28 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 Pfam PF00563 EAL domain 148 292 8.7E-33 T 22-04-2016 IPR001633 EAL domain VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 SMART SM00052 141 293 1.9E-10 T 22-04-2016 IPR001633 EAL domain VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 131 1.9E-34 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 PANTHER PTHR10799 1 241 2.3E-66 T 22-04-2016 VPUCM_RS19605 2b6888c40d82984782376bd2d694bf28 293 SUPERFAMILY SSF55073 1 133 1.57E-40 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 SUPERFAMILY SSF52402 15 233 3.53E-62 T 22-04-2016 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 Pfam PF01171 PP-loop family 21 199 1.0E-57 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 SMART SM00977 365 434 1.7E-21 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 23.504 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 Pfam PF09179 TilS substrate binding domain 248 315 1.0E-18 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 Gene3D G3DSA:3.40.50.620 19 181 1.4E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 SUPERFAMILY SSF82829 236 319 2.75E-24 T 22-04-2016 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 1.2E-14 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 PANTHER PTHR11807:SF2 1 419 3.3E-88 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 SUPERFAMILY SSF56037 322 436 5.49E-28 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 1.4E-54 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 PANTHER PTHR11807 1 419 3.3E-88 T 22-04-2016 VPUCM_RS04715 95e1d8fc8f0ca099d7380940dd2102b4 438 Pfam PF11734 TilS substrate C-terminal domain 365 435 2.0E-24 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VPUCM_RS14870 e5eb121aea4b45562c174fe6b1f1c1da 323 SUPERFAMILY SSF55681 11 320 8.67E-81 T 22-04-2016 VPUCM_RS14870 e5eb121aea4b45562c174fe6b1f1c1da 323 PANTHER PTHR22594 10 319 6.0E-144 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS14870 e5eb121aea4b45562c174fe6b1f1c1da 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.238 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VPUCM_RS14870 e5eb121aea4b45562c174fe6b1f1c1da 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 3.7E-128 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VPUCM_RS14870 e5eb121aea4b45562c174fe6b1f1c1da 323 Gene3D G3DSA:3.30.930.10 12 319 3.2E-71 T 22-04-2016 VPUCM_RS14870 e5eb121aea4b45562c174fe6b1f1c1da 323 PANTHER PTHR22594:SF7 10 319 6.0E-144 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VPUCM_RS14870 e5eb121aea4b45562c174fe6b1f1c1da 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 319 3.8E-45 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS05935 dc3f5f4e4d397df1ab88669faf461f44 442 Gene3D G3DSA:3.60.10.10 178 346 1.0E-12 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS05935 dc3f5f4e4d397df1ab88669faf461f44 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 433 2.5E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS05935 dc3f5f4e4d397df1ab88669faf461f44 442 PANTHER PTHR16320 172 344 3.5E-33 T 22-04-2016 VPUCM_RS05935 dc3f5f4e4d397df1ab88669faf461f44 442 SUPERFAMILY SSF56219 175 440 4.84E-65 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 Pfam PF06165 Glycosyltransferase family 36 21 267 3.0E-84 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 PANTHER PTHR37469 419 802 0.0 T 22-04-2016 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 PANTHER PTHR37469 1 393 0.0 T 22-04-2016 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 PANTHER PTHR37469:SF1 419 802 0.0 T 22-04-2016 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 PANTHER PTHR37469:SF1 1 393 0.0 T 22-04-2016 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 Gene3D G3DSA:2.60.420.10 720 782 5.4E-9 T 22-04-2016 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 Gene3D G3DSA:2.70.98.40 1 325 1.9E-101 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 Gene3D G3DSA:1.50.10.10 508 674 6.6E-8 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 SUPERFAMILY SSF74650 1 269 2.01E-82 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 5.6E-210 T 22-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 SUPERFAMILY SSF48208 274 801 3.4E-110 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VPUCM_RS12870 592ac2fc2b39266e40a4ed43d41a5c63 802 SMART SM01068 1 63 2.3E-20 T 22-04-2016 IPR009342 Putative carbohydrate binding domain VPUCM_RS11545 fc5181b521cd6171871ed345ab7d2fac 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.2E-32 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VPUCM_RS11545 fc5181b521cd6171871ed345ab7d2fac 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.1E-28 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS11545 fc5181b521cd6171871ed345ab7d2fac 89 PANTHER PTHR34040 1 89 6.0E-37 T 22-04-2016 VPUCM_RS11545 fc5181b521cd6171871ed345ab7d2fac 89 PIRSF PIRSF004669 1 89 1.0E-29 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS11545 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS11545 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS11545 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS11545 fc5181b521cd6171871ed345ab7d2fac 89 PANTHER PTHR34040:SF2 1 89 6.0E-37 T 22-04-2016 VPUCM_RS10550 d55dd517b67cc76496f2d1d7cf347a9e 272 SUPERFAMILY SSF56752 1 267 4.06E-70 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VPUCM_RS10550 d55dd517b67cc76496f2d1d7cf347a9e 272 Gene3D G3DSA:3.20.10.10 123 266 7.2E-42 T 22-04-2016 VPUCM_RS10550 d55dd517b67cc76496f2d1d7cf347a9e 272 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 267 3.4E-108 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 VPUCM_RS10550 d55dd517b67cc76496f2d1d7cf347a9e 272 Pfam PF01063 Amino-transferase class IV 24 247 1.1E-46 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VPUCM_RS10550 d55dd517b67cc76496f2d1d7cf347a9e 272 PANTHER PTHR11825:SF55 1 267 9.7E-76 T 22-04-2016 VPUCM_RS10550 d55dd517b67cc76496f2d1d7cf347a9e 272 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VPUCM_RS10550 d55dd517b67cc76496f2d1d7cf347a9e 272 Gene3D G3DSA:3.30.470.10 1 105 5.8E-32 T 22-04-2016 VPUCM_RS10550 d55dd517b67cc76496f2d1d7cf347a9e 272 PANTHER PTHR11825 1 267 9.7E-76 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 759 3.0E-56 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 SUPERFAMILY SSF81923 4 156 5.2E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 SMART SM00382 597 748 6.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 SMART SM00382 198 343 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Gene3D G3DSA:3.40.50.300 550 775 4.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Gene3D G3DSA:1.10.1780.10 1 147 1.0E-45 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.4E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 5.4E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 8.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 8.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 8.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 8.7E-43 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 SMART SM01086 766 857 1.2E-28 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 SUPERFAMILY SSF52540 159 545 1.55E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 SUPERFAMILY SSF52540 546 849 1.05E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Gene3D G3DSA:3.40.50.300 160 342 1.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 PANTHER PTHR11638 1 862 0.0 T 22-04-2016 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 PANTHER PTHR11638:SF18 1 862 0.0 T 22-04-2016 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 2.0E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Gene3D G3DSA:1.10.8.60 776 858 6.4E-27 T 22-04-2016 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 1.5E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VPUCM_RS03925 bfc0f1485ce28accae93f3af11bd500b 865 Gene3D G3DSA:1.10.8.60 344 428 8.6E-37 T 22-04-2016 VPUCM_RS13730 8138e056ad05bda4c2a1655d094dafda 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 5.1E-24 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VPUCM_RS13730 8138e056ad05bda4c2a1655d094dafda 101 Gene3D G3DSA:3.40.50.270 1 101 6.5E-38 T 22-04-2016 VPUCM_RS13730 8138e056ad05bda4c2a1655d094dafda 101 SUPERFAMILY SSF52794 1 101 3.53E-36 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VPUCM_RS13730 8138e056ad05bda4c2a1655d094dafda 101 PANTHER PTHR34581 2 101 1.1E-49 T 22-04-2016 VPUCM_RS13730 8138e056ad05bda4c2a1655d094dafda 101 PANTHER PTHR34581:SF2 2 101 1.1E-49 T 22-04-2016 VPUCM_RS13720 816a9d4ada2159d98d21889893eae897 103 PANTHER PTHR34382 1 103 2.4E-44 T 22-04-2016 VPUCM_RS13720 816a9d4ada2159d98d21889893eae897 103 PANTHER PTHR34382:SF2 1 103 2.4E-44 T 22-04-2016 VPUCM_RS13720 816a9d4ada2159d98d21889893eae897 103 Gene3D G3DSA:1.20.58.80 2 100 9.6E-38 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS13720 816a9d4ada2159d98d21889893eae897 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 1.2E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS13720 816a9d4ada2159d98d21889893eae897 103 SUPERFAMILY SSF46973 2 98 4.32E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS13720 816a9d4ada2159d98d21889893eae897 103 PIRSF PIRSF000699 1 103 2.2E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS11965 cc25aa7cbc411f9354b03bca3ca81915 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 241 3.9E-72 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 Gene3D G3DSA:3.40.190.10 27 143 1.1E-22 T 22-04-2016 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PANTHER PTHR30222:SF10 1 340 1.1E-158 T 22-04-2016 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 SUPERFAMILY SSF53850 26 340 4.78E-85 T 22-04-2016 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PANTHER PTHR30222 1 340 1.1E-158 T 22-04-2016 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 Gene3D G3DSA:3.40.190.10 144 287 2.4E-56 T 22-04-2016 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-69 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 PIRSF PIRSF019574 1 343 1.6E-109 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08095 d4a8fa70e072b8993060b9fb82f01dc7 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 300 3.4E-37 T 22-04-2016 VPUCM_RS06285 8d1219cc7bcf0bfefea182cb03561265 98 Gene3D G3DSA:3.30.70.1060 1 98 1.3E-37 T 22-04-2016 VPUCM_RS06285 8d1219cc7bcf0bfefea182cb03561265 98 Pfam PF03795 YCII-related domain 1 95 2.2E-29 T 22-04-2016 IPR005545 YCII-related VPUCM_RS06285 8d1219cc7bcf0bfefea182cb03561265 98 PANTHER PTHR33606 1 98 7.4E-34 T 22-04-2016 VPUCM_RS06285 8d1219cc7bcf0bfefea182cb03561265 98 SUPERFAMILY SSF54909 1 98 2.5E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS06905 c84d373f521404675edb3e36a6ad0aab 152 Pfam PF13471 Transglutaminase-like superfamily 31 80 5.0E-5 T 22-04-2016 IPR032708 Microcin J25-processing protein McjB, C-terminal VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 Pfam PF00970 Oxidoreductase FAD-binding domain 22 99 4.4E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 9.6E-24 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 Gene3D G3DSA:3.40.50.80 104 235 8.0E-38 T 22-04-2016 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 SUPERFAMILY SSF63380 2 101 4.74E-17 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 SUPERFAMILY SSF52343 104 235 2.62E-35 T 22-04-2016 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 Gene3D G3DSA:2.40.30.10 1 101 1.1E-26 T 22-04-2016 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 PANTHER PTHR19370 3 237 7.5E-119 T 22-04-2016 VPUCM_RS15630 177b4978630b88ac22617d1b562fe283 237 PANTHER PTHR19370:SF119 3 237 7.5E-119 T 22-04-2016 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 SUPERFAMILY SSF56931 13 251 9.94E-69 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 PANTHER PTHR40457 23 252 2.8E-50 T 22-04-2016 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 167 185 2.9E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 222 242 2.9E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 53 70 2.9E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 96 115 2.9E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 200 217 2.9E-21 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 Pfam PF02253 Phospholipase A1 19 249 5.7E-59 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VPUCM_RS09725 6768036fb4587e9a003c62fa95e97885 252 Gene3D G3DSA:2.40.230.10 18 251 1.5E-67 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 VPUCM_RS02225 0c045c7748906b02c6f5c3c4e6a23cb0 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 15.785 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VPUCM_RS02225 0c045c7748906b02c6f5c3c4e6a23cb0 105 Pfam PF04999 Cell division protein FtsL 8 103 7.2E-36 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VPUCM_RS02225 0c045c7748906b02c6f5c3c4e6a23cb0 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 102 2.9E-25 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VPUCM_RS02225 0c045c7748906b02c6f5c3c4e6a23cb0 105 PANTHER PTHR37479 1 105 1.8E-34 T 22-04-2016 VPUCM_RS02225 0c045c7748906b02c6f5c3c4e6a23cb0 105 PANTHER PTHR37479:SF1 1 105 1.8E-34 T 22-04-2016 VPUCM_RS02690 f741372e7414174b52a5ed910c75acce 122 Gene3D G3DSA:2.40.10.220 1 121 9.7E-38 T 22-04-2016 VPUCM_RS02690 f741372e7414174b52a5ed910c75acce 122 PIRSF PIRSF028141 1 120 5.0E-35 T 22-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type VPUCM_RS02690 f741372e7414174b52a5ed910c75acce 122 Pfam PF07238 PilZ domain 3 100 2.8E-13 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VPUCM_RS02690 f741372e7414174b52a5ed910c75acce 122 SUPERFAMILY SSF141371 1 120 8.24E-29 T 22-04-2016 VPUCM_RS14335 651a2b034d77ed5ba0c119708376fd32 100 PIRSF PIRSF003135 1 100 1.1E-46 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VPUCM_RS14335 651a2b034d77ed5ba0c119708376fd32 100 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 28.938 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VPUCM_RS14335 651a2b034d77ed5ba0c119708376fd32 100 Pfam PF00436 Single-strand binding protein family 3 88 8.0E-7 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VPUCM_RS14335 651a2b034d77ed5ba0c119708376fd32 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 3.0E-31 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VPUCM_RS14335 651a2b034d77ed5ba0c119708376fd32 100 SUPERFAMILY SSF50249 1 99 2.19E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14335 651a2b034d77ed5ba0c119708376fd32 100 Gene3D G3DSA:2.40.50.140 1 100 1.3E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS03975 7676c953847c8d651a2db9b109ab7d55 255 SUPERFAMILY SSF53098 104 250 1.39E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS03975 7676c953847c8d651a2db9b109ab7d55 255 Pfam PF00665 Integrase core domain 105 209 3.7E-12 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VPUCM_RS03975 7676c953847c8d651a2db9b109ab7d55 255 Gene3D G3DSA:3.30.420.10 104 248 7.1E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS03975 7676c953847c8d651a2db9b109ab7d55 255 ProSitePatterns PS01043 Transposases, IS30 family, signature. 196 212 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VPUCM_RS03975 7676c953847c8d651a2db9b109ab7d55 255 PANTHER PTHR10948 4 248 8.9E-65 T 22-04-2016 VPUCM_RS14520 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF13309 HTH domain 174 231 1.6E-18 T 22-04-2016 VPUCM_RS14520 6ce09169e4cd3489b16b3d6c64b12207 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 22-04-2016 IPR013559 YheO-like VPUCM_RS14520 6ce09169e4cd3489b16b3d6c64b12207 238 PANTHER PTHR35568 14 238 6.8E-167 T 22-04-2016 VPUCM_RS14520 6ce09169e4cd3489b16b3d6c64b12207 238 PANTHER PTHR35568:SF3 14 238 6.8E-167 T 22-04-2016 VPUCM_RS14520 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF08348 YheO-like PAS domain 31 139 5.6E-35 T 22-04-2016 IPR013559 YheO-like VPUCM_RS08445 24980086542cd85425ad858429fde761 401 SUPERFAMILY SSF161098 193 382 1.83E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 1.4E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 SUPERFAMILY SSF161098 91 162 7.36E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 PANTHER PTHR30085 259 401 5.5E-165 T 22-04-2016 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 PANTHER PTHR30085 1 180 5.5E-165 T 22-04-2016 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 PANTHER PTHR30085:SF1 259 401 5.5E-165 T 22-04-2016 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 PANTHER PTHR30085:SF1 1 180 5.5E-165 T 22-04-2016 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 396 3.9E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 Gene3D G3DSA:1.10.3720.10 201 202 1.8E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 Gene3D G3DSA:1.10.3720.10 90 159 1.8E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08445 24980086542cd85425ad858429fde761 401 Gene3D G3DSA:1.10.3720.10 267 396 1.8E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02470 37303fa4eb4cc519f46dfa6353fdcc3a 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 9.0E-26 T 22-04-2016 IPR021932 Protein of unknown function DUF3545 VPUCM_RS00660 bb8d16d25b8a64e1f83505759b710d84 307 Pfam PF11356 Type II secretion system protein C 37 177 3.3E-43 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal VPUCM_RS00660 bb8d16d25b8a64e1f83505759b710d84 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 9.4E-74 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00660 bb8d16d25b8a64e1f83505759b710d84 307 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 245 271 - T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00660 bb8d16d25b8a64e1f83505759b710d84 307 Gene3D G3DSA:2.30.42.10 242 304 1.7E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS00660 bb8d16d25b8a64e1f83505759b710d84 307 SUPERFAMILY SSF50156 211 307 5.46E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 SUPERFAMILY SSF143437 1 173 1.92E-47 T 22-04-2016 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 PANTHER PTHR14911:SF15 3 417 3.4E-257 T 22-04-2016 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 SUPERFAMILY SSF52402 174 372 1.17E-42 T 22-04-2016 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Gene3D G3DSA:3.40.50.620 173 333 1.1E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 PANTHER PTHR14911 3 417 3.4E-257 T 22-04-2016 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 224.789 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Pfam PF02926 THUMP domain 45 158 2.3E-24 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.9E-42 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 SMART SM00981 75 165 8.2E-26 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Gene3D G3DSA:3.40.250.10 405 480 9.8E-11 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.5E-73 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.5E-114 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VPUCM_RS12650 cc2bd9c9c9b16fb499c0423ec33cc38f 482 SUPERFAMILY SSF52821 402 481 1.83E-12 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10450 ce423144d286918801206531909589aa 556 SMART SM00316 103 171 1.2E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS10450 ce423144d286918801206531909589aa 556 SMART SM00316 190 260 6.0E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS10450 ce423144d286918801206531909589aa 556 SMART SM00316 449 520 1.5E-19 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS10450 ce423144d286918801206531909589aa 556 SMART SM00316 275 347 1.8E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS10450 ce423144d286918801206531909589aa 556 SMART SM00316 362 434 1.9E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS10450 ce423144d286918801206531909589aa 556 SMART SM00316 19 87 0.0012 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PANTHER PTHR10724:SF6 1 514 1.1E-275 T 22-04-2016 VPUCM_RS10450 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 347 438 6.34E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS10450 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 189 260 1.6E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS10450 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 449 520 8.7E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS10450 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS10450 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 103 171 5.8E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS10450 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 362 434 1.1E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS10450 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 357 439 2.8E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 429 540 2.61E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 PIRSF PIRSF002111 1 534 4.3E-218 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 255 360 2.29E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 8.3E-231 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10450 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 102 172 1.2E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 PANTHER PTHR10724 1 514 1.1E-275 T 22-04-2016 VPUCM_RS10450 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 445 531 2.5E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 279 356 4.5E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 192 278 9.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 21 101 1.4E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10450 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS07725 db9a7623f035464c97cc376303ea6909 200 SUPERFAMILY SSF51197 3 128 4.12E-5 T 22-04-2016 VPUCM_RS07725 db9a7623f035464c97cc376303ea6909 200 SMART SM00702 11 187 3.2E-34 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 VPUCM_RS07725 db9a7623f035464c97cc376303ea6909 200 PANTHER PTHR12907 1 192 2.0E-61 T 22-04-2016 VPUCM_RS07725 db9a7623f035464c97cc376303ea6909 200 PANTHER PTHR12907:SF14 1 192 2.0E-61 T 22-04-2016 VPUCM_RS07725 db9a7623f035464c97cc376303ea6909 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.0E-21 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 VPUCM_RS07725 db9a7623f035464c97cc376303ea6909 200 Gene3D G3DSA:2.60.120.620 53 183 2.5E-4 T 22-04-2016 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 SMART SM00563 456 570 3.0E-36 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 Pfam PF07690 Major Facilitator Superfamily 43 312 4.0E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 Gene3D G3DSA:3.40.1130.10 445 568 4.7E-15 T 22-04-2016 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 SUPERFAMILY SSF69593 405 609 1.7E-30 T 22-04-2016 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 SUPERFAMILY SSF103473 13 424 6.41E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 Pfam PF01553 Acyltransferase 442 567 4.1E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 Gene3D G3DSA:1.20.1250.20 16 198 1.9E-5 T 22-04-2016 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 PANTHER PTHR10434:SF15 345 620 4.8E-148 T 22-04-2016 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 PANTHER PTHR10434 345 620 4.8E-148 T 22-04-2016 VPUCM_RS05220 24764d6a79821d716c81aade9f7d86f3 624 Gene3D G3DSA:1.20.1250.20 227 420 1.6E-10 T 22-04-2016 VPUCM_RS23955 99ea5321519abb7a1b1e45902d0ed7bc 71 PANTHER PTHR30290:SF24 1 71 3.4E-12 T 22-04-2016 VPUCM_RS23955 99ea5321519abb7a1b1e45902d0ed7bc 71 Gene3D G3DSA:3.10.105.10 7 61 3.5E-12 T 22-04-2016 VPUCM_RS23955 99ea5321519abb7a1b1e45902d0ed7bc 71 PANTHER PTHR30290 1 71 3.4E-12 T 22-04-2016 VPUCM_RS23955 99ea5321519abb7a1b1e45902d0ed7bc 71 SUPERFAMILY SSF53850 11 71 6.52E-13 T 22-04-2016 VPUCM_RS14920 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.2E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VPUCM_RS14920 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.2E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VPUCM_RS14920 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.2E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VPUCM_RS14920 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.2E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VPUCM_RS14920 970b2569037946ba84462e7e18ff496e 165 Pfam PF02308 MgtC family 19 141 7.0E-28 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VPUCM_RS14920 970b2569037946ba84462e7e18ff496e 165 PANTHER PTHR33778 26 143 1.8E-24 T 22-04-2016 VPUCM_RS01825 70c81b579a3b92005e10d2beaf4ae6d7 260 PANTHER PTHR23054:SF21 74 243 1.5E-29 T 22-04-2016 VPUCM_RS01825 70c81b579a3b92005e10d2beaf4ae6d7 260 Pfam PF04784 Protein of unknown function, DUF547 89 198 4.8E-26 T 22-04-2016 IPR006869 Domain of unknown function DUF547 VPUCM_RS01825 70c81b579a3b92005e10d2beaf4ae6d7 260 PANTHER PTHR23054 74 243 1.5E-29 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 SUPERFAMILY SSF82693 54 149 5.93E-22 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 Gene3D G3DSA:1.20.1640.10 304 512 2.6E-40 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 PANTHER PTHR32063 15 1035 0.0 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 SUPERFAMILY SSF82866 306 505 1.31E-33 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 SUPERFAMILY SSF82714 198 281 7.06E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 Gene3D G3DSA:3.30.2090.10 730 805 4.8E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 Gene3D G3DSA:3.30.2090.10 198 281 1.0E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 Pfam PF00873 AcrB/AcrD/AcrF family 18 1029 1.3E-173 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 SUPERFAMILY SSF82714 730 804 2.09E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 PANTHER PTHR32063:SF18 15 1035 0.0 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 Gene3D G3DSA:1.10.3850.10 817 1030 1.3E-57 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 SUPERFAMILY SSF82693 150 196 3.14E-18 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 SUPERFAMILY SSF82693 284 337 3.14E-18 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 SUPERFAMILY SSF82866 809 1031 4.05E-48 T 22-04-2016 VPUCM_RS10130 a5863dd9360dc8313212292b06ead57d 1035 Gene3D G3DSA:3.30.70.1430 54 153 2.9E-27 T 22-04-2016 VPUCM_RS15540 8e79f93bf390cfefdd99b499256776a1 516 PIRSF PIRSF028175 1 516 0.0 T 22-04-2016 IPR014540 Uncharacterised conserved protein UCP028175 VPUCM_RS12140 156b2f6369c2564ee5df6ad55360620c 137 PANTHER PTHR30435 1 137 8.9E-65 T 22-04-2016 VPUCM_RS12140 156b2f6369c2564ee5df6ad55360620c 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VPUCM_RS12140 156b2f6369c2564ee5df6ad55360620c 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 2.9E-51 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VPUCM_RS12140 156b2f6369c2564ee5df6ad55360620c 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VPUCM_RS12140 156b2f6369c2564ee5df6ad55360620c 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 135 3.0E-12 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VPUCM_RS12140 156b2f6369c2564ee5df6ad55360620c 137 PANTHER PTHR30435:SF2 1 137 8.9E-65 T 22-04-2016 VPUCM_RS07605 58c775360288606b983d1925d5cc268a 672 PANTHER PTHR32089:SF44 247 282 4.6E-118 T 22-04-2016 VPUCM_RS07605 58c775360288606b983d1925d5cc268a 672 PANTHER PTHR32089:SF44 313 670 4.6E-118 T 22-04-2016 VPUCM_RS07605 58c775360288606b983d1925d5cc268a 672 SMART SM00283 405 667 2.1E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS07605 58c775360288606b983d1925d5cc268a 672 PANTHER PTHR32089 247 282 4.6E-118 T 22-04-2016 VPUCM_RS07605 58c775360288606b983d1925d5cc268a 672 PANTHER PTHR32089 313 670 4.6E-118 T 22-04-2016 VPUCM_RS07605 58c775360288606b983d1925d5cc268a 672 SUPERFAMILY SSF58104 359 668 4.05E-61 T 22-04-2016 VPUCM_RS07605 58c775360288606b983d1925d5cc268a 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 469 664 6.8E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS07605 58c775360288606b983d1925d5cc268a 672 Gene3D G3DSA:1.10.287.950 421 636 4.9E-49 T 22-04-2016 VPUCM_RS02915 ef73bfe6ce40993c8548493c2f8e8b3f 109 PANTHER PTHR33909:SF1 1 109 1.2E-34 T 22-04-2016 VPUCM_RS02915 ef73bfe6ce40993c8548493c2f8e8b3f 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC VPUCM_RS02915 ef73bfe6ce40993c8548493c2f8e8b3f 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC VPUCM_RS02915 ef73bfe6ce40993c8548493c2f8e8b3f 109 Pfam PF02699 Preprotein translocase subunit 21 98 6.5E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC VPUCM_RS02915 ef73bfe6ce40993c8548493c2f8e8b3f 109 SMART SM01323 17 101 1.1E-38 T 22-04-2016 IPR003849 Preprotein translocase YajC VPUCM_RS02915 ef73bfe6ce40993c8548493c2f8e8b3f 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 1.3E-30 T 22-04-2016 IPR003849 Preprotein translocase YajC VPUCM_RS02915 ef73bfe6ce40993c8548493c2f8e8b3f 109 PANTHER PTHR33909 1 109 1.2E-34 T 22-04-2016 VPUCM_RS14850 e244f8ffc68c867df6eb2e331c991c5c 381 Gene3D G3DSA:2.70.70.10 240 380 1.1E-34 T 22-04-2016 VPUCM_RS14850 e244f8ffc68c867df6eb2e331c991c5c 381 Pfam PF01551 Peptidase family M23 282 375 1.2E-24 T 22-04-2016 IPR016047 Peptidase M23 VPUCM_RS14850 e244f8ffc68c867df6eb2e331c991c5c 381 PANTHER PTHR21666:SF213 35 381 5.8E-88 T 22-04-2016 VPUCM_RS14850 e244f8ffc68c867df6eb2e331c991c5c 381 PANTHER PTHR21666 35 381 5.8E-88 T 22-04-2016 VPUCM_RS14850 e244f8ffc68c867df6eb2e331c991c5c 381 SUPERFAMILY SSF51261 148 379 4.87E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif VPUCM_RS08515 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Pfam PF02321 Outer membrane efflux protein 233 416 1.7E-30 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS08515 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Pfam PF02321 Outer membrane efflux protein 24 212 3.6E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS08515 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 1.5E-120 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VPUCM_RS08515 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 SUPERFAMILY SSF56954 23 430 5.36E-88 T 22-04-2016 VPUCM_RS08515 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 PANTHER PTHR30026:SF4 11 436 3.9E-104 T 22-04-2016 VPUCM_RS08515 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Gene3D G3DSA:1.20.1600.10 22 420 7.1E-66 T 22-04-2016 VPUCM_RS08515 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 PANTHER PTHR30026 11 436 3.9E-104 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Gene3D G3DSA:2.60.34.10 387 528 2.2E-55 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 5.2E-269 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Gene3D G3DSA:1.20.1270.10 529 616 3.1E-30 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PANTHER PTHR19375:SF176 19 606 0.0 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Pfam PF00012 Hsp70 protein 22 601 3.9E-191 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Gene3D G3DSA:3.30.420.40 128 200 1.1E-52 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Gene3D G3DSA:3.30.420.40 20 87 1.1E-52 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 SUPERFAMILY SSF100934 504 616 1.8E-34 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PANTHER PTHR19375 19 606 0.0 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 SUPERFAMILY SSF100920 384 537 1.02E-51 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Gene3D G3DSA:3.30.420.40 201 238 8.9E-31 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Gene3D G3DSA:3.30.420.40 314 356 8.9E-31 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Gene3D G3DSA:3.30.30.30 88 127 1.4E-9 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.2E-52 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Gene3D G3DSA:3.90.640.10 239 310 3.3E-6 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 SUPERFAMILY SSF53067 19 196 4.21E-50 T 22-04-2016 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.643 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VPUCM_RS02965 9906427ddb11b8159acb8fb06402251b 617 SUPERFAMILY SSF53067 200 377 9.36E-50 T 22-04-2016 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 PANTHER PTHR11748 17 194 1.2E-175 T 22-04-2016 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 PANTHER PTHR11748 242 582 1.2E-175 T 22-04-2016 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 Gene3D G3DSA:3.30.43.10 3 109 6.1E-28 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 Pfam PF01565 FAD binding domain 52 191 1.4E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 Gene3D G3DSA:3.30.465.10 110 277 2.8E-40 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 Pfam PF13183 4Fe-4S dicluster domain 570 681 3.6E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 9.4E-62 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 Gene3D G3DSA:1.10.1060.10 646 695 6.0E-14 T 22-04-2016 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 Gene3D G3DSA:1.10.1060.10 511 614 6.0E-14 T 22-04-2016 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 SUPERFAMILY SSF55103 252 538 3.27E-53 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 PANTHER PTHR11748:SF35 17 194 1.2E-175 T 22-04-2016 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 PANTHER PTHR11748:SF35 242 582 1.2E-175 T 22-04-2016 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 SUPERFAMILY SSF46548 649 685 5.1E-7 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 SUPERFAMILY SSF46548 571 617 5.1E-7 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 SUPERFAMILY SSF56176 235 277 9.4E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 SUPERFAMILY SSF56176 24 192 9.4E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VPUCM_RS09675 26f6d5579bb14db51d66bd0196cf80c3 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS01775 3743f9bc0a9745b693d7c032ddec0bf4 266 Pfam PF06738 Putative threonine/serine exporter 21 258 3.4E-67 T 22-04-2016 IPR010619 Putative threonine/serine exporter VPUCM_RS01775 3743f9bc0a9745b693d7c032ddec0bf4 266 PANTHER PTHR34390 1 266 3.7E-125 T 22-04-2016 VPUCM_RS01775 3743f9bc0a9745b693d7c032ddec0bf4 266 PANTHER PTHR34390:SF2 1 266 3.7E-125 T 22-04-2016 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 283 4.9E-72 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 5.8E-168 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 Gene3D G3DSA:2.40.37.10 269 415 1.0E-48 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 SUPERFAMILY SSF50621 261 414 2.93E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 SUPERFAMILY SSF51419 27 284 9.74E-83 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 Gene3D G3DSA:3.20.20.10 37 268 1.8E-82 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PANTHER PTHR11482:SF5 3 416 8.6E-185 T 22-04-2016 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PANTHER PTHR11482 3 416 8.6E-185 T 22-04-2016 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.423 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 288 390 1.3E-17 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.4E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.4E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.4E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS15575 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.4E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS07385 a50a81ee74f3f17508d20c5f73fe7311 119 SUPERFAMILY SSF54593 6 117 2.2E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS07385 a50a81ee74f3f17508d20c5f73fe7311 119 Gene3D G3DSA:3.10.180.10 7 116 6.8E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS07385 a50a81ee74f3f17508d20c5f73fe7311 119 PANTHER PTHR33993 1 117 3.6E-62 T 22-04-2016 VPUCM_RS07385 a50a81ee74f3f17508d20c5f73fe7311 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 4.4E-7 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VPUCM_RS07385 a50a81ee74f3f17508d20c5f73fe7311 119 PANTHER PTHR33993:SF1 1 117 3.6E-62 T 22-04-2016 VPUCM_RS10990 b1d84c569586ddbff5b650c541c9ef28 138 SUPERFAMILY SSF54593 3 130 3.76E-36 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS10990 b1d84c569586ddbff5b650c541c9ef28 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VPUCM_RS10990 b1d84c569586ddbff5b650c541c9ef28 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VPUCM_RS10990 b1d84c569586ddbff5b650c541c9ef28 138 PANTHER PTHR10374 1 134 4.0E-61 T 22-04-2016 VPUCM_RS10990 b1d84c569586ddbff5b650c541c9ef28 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 8.3E-69 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VPUCM_RS10990 b1d84c569586ddbff5b650c541c9ef28 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 6.3E-24 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VPUCM_RS10990 b1d84c569586ddbff5b650c541c9ef28 138 Gene3D G3DSA:3.10.180.10 5 131 2.1E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS01370 b236b90d4c24dd22610b0c89a570fa4f 204 PANTHER PTHR30363:SF9 1 204 1.2E-96 T 22-04-2016 VPUCM_RS01370 b236b90d4c24dd22610b0c89a570fa4f 204 PANTHER PTHR30363 1 204 1.2E-96 T 22-04-2016 VPUCM_RS01370 b236b90d4c24dd22610b0c89a570fa4f 204 Gene3D G3DSA:1.10.10.10 6 99 2.3E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01370 b236b90d4c24dd22610b0c89a570fa4f 204 SUPERFAMILY SSF46785 5 183 1.94E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01370 b236b90d4c24dd22610b0c89a570fa4f 204 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 4.5E-6 T 22-04-2016 VPUCM_RS13310 3dcbaf5bf07851aa97cfb74f891db788 243 Pfam PF11967 Recombination protein O N terminal 11 81 2.4E-24 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal VPUCM_RS13310 3dcbaf5bf07851aa97cfb74f891db788 243 SUPERFAMILY SSF50249 10 80 5.82E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS13310 3dcbaf5bf07851aa97cfb74f891db788 243 SUPERFAMILY SSF57863 91 169 6.28E-12 T 22-04-2016 VPUCM_RS13310 3dcbaf5bf07851aa97cfb74f891db788 243 Gene3D G3DSA:2.40.50.140 12 80 2.6E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS13310 3dcbaf5bf07851aa97cfb74f891db788 243 Pfam PF02565 Recombination protein O C terminal 90 230 1.0E-23 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VPUCM_RS13310 3dcbaf5bf07851aa97cfb74f891db788 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 4.8E-41 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VPUCM_RS13310 3dcbaf5bf07851aa97cfb74f891db788 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.918 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VPUCM_RS13310 3dcbaf5bf07851aa97cfb74f891db788 243 PANTHER PTHR33991 6 239 1.7E-65 T 22-04-2016 VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 SMART SM00448 2 111 4.6E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 Pfam PF00072 Response regulator receiver domain 4 112 9.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 SMART SM00862 149 225 1.4E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 SUPERFAMILY SSF46894 124 226 9.07E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 6.4E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 Gene3D G3DSA:1.10.10.10 126 227 3.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 PANTHER PTHR26402:SF614 2 228 3.9E-78 T 22-04-2016 VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 SUPERFAMILY SSF52172 1 123 1.85E-39 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 PANTHER PTHR26402 2 228 3.9E-78 T 22-04-2016 VPUCM_RS14960 fef8431caeaf550e3913c4f4165f333d 229 Gene3D G3DSA:3.40.50.2300 1 123 4.2E-39 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 41 130 2.79E-23 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.2090.10 181 264 2.2E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 136 181 7.72E-22 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 267 323 7.72E-22 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.8E-277 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 553 650 1.99E-21 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:1.20.1640.10 284 500 1.3E-55 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.2090.10 700 787 1.2E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PANTHER PTHR32063 1 1029 0.0 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82866 290 489 4.97E-47 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82714 182 263 1.31E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.1E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1430 555 650 3.3E-17 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:1.10.3850.10 792 1006 3.7E-58 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1430 41 141 4.3E-28 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82714 701 783 1.31E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82866 782 1008 7.85E-48 T 22-04-2016 VPUCM_RS00200 5fcb4c67bedb9561df3c72a334d352e1 1040 PANTHER PTHR32063:SF28 1 1029 0.0 T 22-04-2016 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 Gene3D G3DSA:3.30.1840.10 107 300 5.4E-56 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 PANTHER PTHR30218:SF0 1 690 0.0 T 22-04-2016 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 Gene3D G3DSA:3.30.870.10 315 499 2.8E-72 T 22-04-2016 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 6.0E-47 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.3E-145 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.5E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 SUPERFAMILY SSF56024 315 496 1.29E-53 T 22-04-2016 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 PIRSF PIRSF015589 1 694 1.9E-252 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.1E-263 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 SUPERFAMILY SSF56024 500 684 6.28E-70 T 22-04-2016 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 32.367 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 SUPERFAMILY SSF143724 107 313 8.24E-64 T 22-04-2016 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 PANTHER PTHR30218 1 690 0.0 T 22-04-2016 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 Gene3D G3DSA:3.30.870.10 500 684 2.6E-71 T 22-04-2016 VPUCM_RS02840 fe0d237458f44105ea56338459970e0f 696 SUPERFAMILY SSF140356 4 104 3.01E-32 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VPUCM_RS12950 809a456f7e2e0f51624d230cea7525b3 161 SUPERFAMILY SSF55083 1 159 1.57E-55 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS12950 809a456f7e2e0f51624d230cea7525b3 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.5E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS12950 809a456f7e2e0f51624d230cea7525b3 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 5.4E-47 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS12950 809a456f7e2e0f51624d230cea7525b3 161 PANTHER PTHR20941 1 159 6.0E-78 T 22-04-2016 VPUCM_RS12950 809a456f7e2e0f51624d230cea7525b3 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS12950 809a456f7e2e0f51624d230cea7525b3 161 Gene3D G3DSA:3.30.70.560 3 155 9.9E-60 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS03000 0caaa4630ab42b7e03a4305444ea68f4 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 5.5E-127 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VPUCM_RS03000 0caaa4630ab42b7e03a4305444ea68f4 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.154 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VPUCM_RS03000 0caaa4630ab42b7e03a4305444ea68f4 372 PIRSF PIRSF004640 1 364 6.1E-148 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VPUCM_RS03000 0caaa4630ab42b7e03a4305444ea68f4 372 SUPERFAMILY SSF51717 15 208 7.3E-11 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VPUCM_RS03000 0caaa4630ab42b7e03a4305444ea68f4 372 SUPERFAMILY SSF56014 265 354 6.28E-11 T 22-04-2016 VPUCM_RS03000 0caaa4630ab42b7e03a4305444ea68f4 372 PANTHER PTHR30454 1 368 2.8E-225 T 22-04-2016 VPUCM_RS03000 0caaa4630ab42b7e03a4305444ea68f4 372 Gene3D G3DSA:3.20.20.70 29 132 2.7E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS03000 0caaa4630ab42b7e03a4305444ea68f4 372 Pfam PF04551 GcpE protein 14 354 1.0E-132 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.6E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 9.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 9.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 9.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 PANTHER PTHR33705:SF1 1 84 4.3E-36 T 22-04-2016 VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 6.9E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 SUPERFAMILY SSF55594 1 82 1.96E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 Gene3D G3DSA:3.30.1340.10 1 83 1.5E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 PANTHER PTHR33705 1 84 4.3E-36 T 22-04-2016 VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VPUCM_RS12065 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 SUPERFAMILY SSF109604 239 396 5.79E-33 T 22-04-2016 VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 Gene3D G3DSA:1.10.3210.10 237 397 2.2E-25 T 22-04-2016 IPR006674 HD domain VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 Gene3D G3DSA:1.10.3210.10 22 204 1.5E-18 T 22-04-2016 IPR006674 HD domain VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 SMART SM00471 245 380 1.5E-11 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 SMART SM00471 31 160 2.7 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 TIGRFAM TIGR00277 HDIG: HDIG domain 249 339 5.4E-9 T 22-04-2016 IPR006675 HDIG domain VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 Pfam PF01966 HD domain 249 370 4.1E-19 T 22-04-2016 IPR006674 HD domain VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 Pfam PF01966 HD domain 37 147 1.2E-5 T 22-04-2016 IPR006674 HD domain VPUCM_RS07730 a85126cd2410ab59ed6d7614ef052c7a 421 SUPERFAMILY SSF109604 26 194 9.63E-17 T 22-04-2016 VPUCM_RS11480 dff045c1cb20c6f035a88be390ce1c3a 164 PANTHER PTHR22617 14 164 7.8E-111 T 22-04-2016 VPUCM_RS11480 dff045c1cb20c6f035a88be390ce1c3a 164 SMART SM00260 16 153 2.5E-50 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11480 dff045c1cb20c6f035a88be390ce1c3a 164 SUPERFAMILY SSF50341 15 158 9.29E-42 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11480 dff045c1cb20c6f035a88be390ce1c3a 164 PANTHER PTHR22617:SF26 14 164 7.8E-111 T 22-04-2016 VPUCM_RS11480 dff045c1cb20c6f035a88be390ce1c3a 164 Pfam PF01584 CheW-like domain 20 155 4.6E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11480 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.40.50.180 59 94 1.1E-8 T 22-04-2016 VPUCM_RS11480 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.30.30.40 95 146 1.0E-8 T 22-04-2016 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 2.2E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Gene3D G3DSA:3.40.120.10 177 251 7.8E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 PANTHER PTHR22573 3 446 1.3E-173 T 22-04-2016 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.6E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Gene3D G3DSA:3.30.310.50 363 443 4.8E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.769 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 9.0E-46 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 SUPERFAMILY SSF55957 358 444 2.88E-22 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.4E-203 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 SUPERFAMILY SSF53738 259 365 2.2E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 SUPERFAMILY SSF53738 4 182 1.26E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 SUPERFAMILY SSF53738 157 257 1.73E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Gene3D G3DSA:3.40.120.10 252 362 1.1E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.9E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.9E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.9E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 PANTHER PTHR22573:SF15 3 446 1.3E-173 T 22-04-2016 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Gene3D G3DSA:3.40.120.10 5 153 2.2E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS03385 1dc55b6e2cae43f85de12d096cc4f7bf 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 6.7E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS07635 ed63ff6d0dd9320b1aab1d17a9414d8f 273 PANTHER PTHR11863 53 231 5.9E-31 T 22-04-2016 VPUCM_RS07635 ed63ff6d0dd9320b1aab1d17a9414d8f 273 Pfam PF04116 Fatty acid hydroxylase superfamily 92 229 2.6E-25 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 VPUCM_RS07635 ed63ff6d0dd9320b1aab1d17a9414d8f 273 PANTHER PTHR11863:SF2 53 231 5.9E-31 T 22-04-2016 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 SUPERFAMILY SSF52540 4 169 6.92E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 22-04-2016 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 22-04-2016 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 22-04-2016 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 22-04-2016 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 22-04-2016 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 Pfam PF01202 Shikimate kinase 13 169 1.5E-57 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 PANTHER PTHR21087 1 171 4.5E-75 T 22-04-2016 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 30.116 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS14365 6ffdba2debfc527604d0c738c96220dd 172 Gene3D G3DSA:3.40.50.300 2 171 4.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 22-04-2016 IPR010916 TonB box, conserved site VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 SUPERFAMILY SSF56935 33 652 9.16E-128 T 22-04-2016 VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 1.0E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 Gene3D G3DSA:2.40.170.20 159 652 3.7E-99 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 Gene3D G3DSA:2.170.130.10 25 158 1.5E-41 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 Pfam PF00593 TonB dependent receptor 397 650 3.5E-40 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 PANTHER PTHR32552 30 652 2.0E-176 T 22-04-2016 VPUCM_RS13455 3dd0ccdca9d770f3a6de8463c7792909 652 PANTHER PTHR32552:SF15 30 652 2.0E-176 T 22-04-2016 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 Pfam PF00742 Homoserine dehydrogenase 600 795 3.3E-43 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 Gene3D G3DSA:3.40.1160.10 106 291 2.3E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 Gene3D G3DSA:3.40.1160.10 2 52 2.3E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 Gene3D G3DSA:3.40.50.720 448 621 3.5E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 PANTHER PTHR21499 378 799 5.9E-202 T 22-04-2016 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 SUPERFAMILY SSF55347 600 783 7.19E-45 T 22-04-2016 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 Pfam PF00696 Amino acid kinase family 5 274 2.4E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 Gene3D G3DSA:3.30.360.10 622 778 5.6E-49 T 22-04-2016 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.3E-66 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 SUPERFAMILY SSF51735 448 622 3.94E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 1.0E-14 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 PANTHER PTHR21499:SF29 378 799 5.9E-202 T 22-04-2016 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 PIRSF PIRSF000727 5 802 2.2E-288 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VPUCM_RS14455 804f1794ba3d5880604f614d4f4d1652 802 SUPERFAMILY SSF53633 5 291 1.31E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 PANTHER PTHR24220 6 16 6.5E-156 T 22-04-2016 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 PANTHER PTHR24220 41 274 6.5E-156 T 22-04-2016 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 SMART SM00382 53 242 8.3E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 PANTHER PTHR24220:SF374 6 16 6.5E-156 T 22-04-2016 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 PANTHER PTHR24220:SF374 41 274 6.5E-156 T 22-04-2016 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 Gene3D G3DSA:3.10.580.10 273 394 1.7E-19 T 22-04-2016 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 Gene3D G3DSA:3.40.50.300 2 264 3.0E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 Pfam PF00571 CBS domain 348 393 7.6E-6 T 22-04-2016 IPR000644 CBS domain VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 SUPERFAMILY SSF52540 43 271 3.16E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 Pfam PF00005 ABC transporter 45 192 1.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 SUPERFAMILY SSF54631 274 392 1.57E-15 T 22-04-2016 VPUCM_RS08975 ead810171f2a7dd9a8ecaf3a636c74e6 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 7.1E-150 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PIRSF PIRSF036480 1 277 9.4E-112 T 22-04-2016 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 Gene3D G3DSA:3.40.50.170 82 275 7.8E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 Gene3D G3DSA:3.30.70.260 3 70 1.9E-11 T 22-04-2016 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 SUPERFAMILY SSF53328 82 276 1.7E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PANTHER PTHR10520 6 271 1.8E-137 T 22-04-2016 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 Pfam PF01842 ACT domain 5 65 1.2E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PANTHER PTHR10520:SF7 6 271 1.8E-137 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.8E-64 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.3E-122 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 SUPERFAMILY SSF55021 4 55 2.33E-8 T 22-04-2016 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 Pfam PF00551 Formyl transferase 82 259 5.7E-50 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS04855 7de080ca1a016b9fb4c943c6310fb9e1 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.977 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:1.20.58.100 447 555 1.2E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.90.700.10 243 349 2.9E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:4.10.80.40 556 588 8.9E-21 T 22-04-2016 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.6E-240 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.2E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.4E-274 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 PIRSF PIRSF000171 1 580 1.8E-49 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 Pfam PF00890 FAD binding domain 9 405 3.3E-118 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 PANTHER PTHR11632 2 573 0.0 T 22-04-2016 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF51905 359 428 1.67E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF51905 5 259 1.67E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.50.50.60 351 423 3.9E-116 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.50.50.60 6 242 3.9E-116 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF46977 452 588 2.75E-46 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VPUCM_RS11805 84bdf563922c8bab6954ca067d761b3c 588 PANTHER PTHR11632:SF5 2 573 0.0 T 22-04-2016 VPUCM_RS13700 611465d5191c6e157fed503d297a2b52 417 Gene3D G3DSA:1.10.3210.10 164 317 3.7E-19 T 22-04-2016 IPR006674 HD domain VPUCM_RS13700 611465d5191c6e157fed503d297a2b52 417 SUPERFAMILY SSF109604 160 330 7.07E-27 T 22-04-2016 VPUCM_RS13700 611465d5191c6e157fed503d297a2b52 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 2.5E-30 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 VPUCM_RS13700 611465d5191c6e157fed503d297a2b52 417 SMART SM00471 164 300 2.0E-8 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS13700 611465d5191c6e157fed503d297a2b52 417 Pfam PF01966 HD domain 170 290 5.5E-16 T 22-04-2016 IPR006674 HD domain VPUCM_RS00875 42f2a23e6dc904fee6b4f1288025e880 141 PANTHER PTHR37819 2 139 2.0E-21 T 22-04-2016 VPUCM_RS00875 42f2a23e6dc904fee6b4f1288025e880 141 PANTHER PTHR37819:SF1 2 139 2.0E-21 T 22-04-2016 VPUCM_RS00875 42f2a23e6dc904fee6b4f1288025e880 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 2.7E-13 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VPUCM_RS00875 42f2a23e6dc904fee6b4f1288025e880 141 PIRSF PIRSF029598 3 135 4.9E-40 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 2.4E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 2.4E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 76 201 3.1E-7 T 22-04-2016 IPR032551 HTH-type transcriptional repressor, C-terminal VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 8.1E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 PANTHER PTHR30055:SF82 7 201 2.2E-69 T 22-04-2016 VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 SUPERFAMILY SSF46689 15 94 3.84E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 Gene3D G3DSA:1.10.357.10 19 202 1.4E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VPUCM_RS00210 1b6148c481ee765f959013a07937d0ed 204 PANTHER PTHR30055 7 201 2.2E-69 T 22-04-2016 VPUCM_RS03885 301571c966e0cfe127e60468a04cff21 147 SUPERFAMILY SSF49764 26 146 1.12E-27 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS03885 301571c966e0cfe127e60468a04cff21 147 PANTHER PTHR11527 11 147 1.5E-25 T 22-04-2016 IPR031107 Small heat shock protein HSP20 VPUCM_RS03885 301571c966e0cfe127e60468a04cff21 147 Pfam PF00011 Hsp20/alpha crystallin family 54 146 1.9E-17 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VPUCM_RS03885 301571c966e0cfe127e60468a04cff21 147 PANTHER PTHR11527:SF118 11 147 1.5E-25 T 22-04-2016 VPUCM_RS03885 301571c966e0cfe127e60468a04cff21 147 Gene3D G3DSA:2.60.40.790 10 147 9.6E-29 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS13130 19ad7d321869891c54ee6c4412dabac9 376 PANTHER PTHR35806 1 376 6.8E-193 T 22-04-2016 VPUCM_RS13130 19ad7d321869891c54ee6c4412dabac9 376 PIRSF PIRSF015658 1 376 1.4E-177 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VPUCM_RS13130 19ad7d321869891c54ee6c4412dabac9 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.0E-168 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VPUCM_RS13130 19ad7d321869891c54ee6c4412dabac9 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.4E-157 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VPUCM_RS05810 3d010dc514cf5ae8c3705243e5e255be 168 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 6 128 4.1E-34 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 VPUCM_RS05810 3d010dc514cf5ae8c3705243e5e255be 168 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 64 70 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS05810 3d010dc514cf5ae8c3705243e5e255be 168 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 4 123 4.1E-30 T 22-04-2016 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 VPUCM_RS09155 efe38fc9960c268dc93ce5531ddf2c75 295 PANTHER PTHR32322 1 267 7.0E-31 T 22-04-2016 VPUCM_RS09155 efe38fc9960c268dc93ce5531ddf2c75 295 SUPERFAMILY SSF103481 41 123 3.14E-7 T 22-04-2016 VPUCM_RS09155 efe38fc9960c268dc93ce5531ddf2c75 295 SUPERFAMILY SSF103481 194 271 3.27E-6 T 22-04-2016 VPUCM_RS09155 efe38fc9960c268dc93ce5531ddf2c75 295 Pfam PF00892 EamA-like transporter family 140 275 1.4E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS09155 efe38fc9960c268dc93ce5531ddf2c75 295 Pfam PF00892 EamA-like transporter family 3 126 6.3E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS03645 8f9f044987725bdd2b5b7233e048dd94 284 Pfam PF14338 Mrr N-terminal domain 4 89 2.7E-20 T 22-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain VPUCM_RS03645 8f9f044987725bdd2b5b7233e048dd94 284 Gene3D G3DSA:3.40.1350.10 142 261 2.7E-19 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VPUCM_RS03645 8f9f044987725bdd2b5b7233e048dd94 284 Pfam PF04471 Restriction endonuclease 142 257 4.3E-33 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VPUCM_RS03645 8f9f044987725bdd2b5b7233e048dd94 284 PANTHER PTHR30015:SF4 1 268 1.5E-31 T 22-04-2016 VPUCM_RS03645 8f9f044987725bdd2b5b7233e048dd94 284 SUPERFAMILY SSF52980 147 259 4.72E-14 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS03645 8f9f044987725bdd2b5b7233e048dd94 284 PANTHER PTHR30015 1 268 1.5E-31 T 22-04-2016 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 Gene3D G3DSA:3.40.710.10 30 282 2.6E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 SUPERFAMILY SSF56601 11 283 4.01E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 5.0E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 1.7E-94 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 SUPERFAMILY SSF69189 283 375 3.34E-28 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 PANTHER PTHR21581 32 392 3.3E-157 T 22-04-2016 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 SMART SM00936 283 373 1.4E-38 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 PANTHER PTHR21581:SF4 32 392 3.3E-157 T 22-04-2016 VPUCM_RS12515 c088a159ca4f11898203174f3d2aede1 392 Gene3D G3DSA:2.60.410.10 283 373 3.1E-33 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 65.96 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 SUPERFAMILY SSF53187 301 377 4.29E-56 T 22-04-2016 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 SUPERFAMILY SSF53187 3 176 4.29E-56 T 22-04-2016 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 Gene3D G3DSA:3.40.630.10 5 185 5.2E-60 T 22-04-2016 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 Gene3D G3DSA:3.40.630.10 319 377 5.2E-60 T 22-04-2016 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 PANTHER PTHR11014:SF75 6 377 3.3E-202 T 22-04-2016 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 Gene3D G3DSA:3.30.70.360 186 287 1.1E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 PANTHER PTHR11014 6 377 3.3E-202 T 22-04-2016 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 Pfam PF07687 Peptidase dimerisation domain 174 285 7.3E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 4.4E-32 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 2.8E-127 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VPUCM_RS14435 048a22de9717a0a70b1151de41b317b2 378 SUPERFAMILY SSF55031 177 290 8.22E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 6.4E-278 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.849 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF01103 Surface antigen 448 804 3.2E-91 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 176 263 8.4E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 266 344 2.9E-10 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.3E-17 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 92 172 1.2E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 PIRSF PIRSF006076 1 804 3.9E-245 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 PANTHER PTHR12815 5 675 8.2E-290 T 22-04-2016 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 PANTHER PTHR12815 691 804 8.2E-290 T 22-04-2016 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 PANTHER PTHR12815:SF11 5 675 8.2E-290 T 22-04-2016 VPUCM_RS04670 85e58b992783507e4fa07b9a236dcab2 804 PANTHER PTHR12815:SF11 691 804 8.2E-290 T 22-04-2016 VPUCM_RS05450 f6b1177a60be05c717b500fb84e4279c 465 Gene3D G3DSA:1.25.40.10 67 99 1.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05450 f6b1177a60be05c717b500fb84e4279c 465 Gene3D G3DSA:1.25.40.10 207 265 1.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05450 f6b1177a60be05c717b500fb84e4279c 465 Gene3D G3DSA:1.25.40.10 131 163 1.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05450 f6b1177a60be05c717b500fb84e4279c 465 SUPERFAMILY SSF48452 67 160 9.28E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05450 f6b1177a60be05c717b500fb84e4279c 465 SUPERFAMILY SSF48452 204 259 9.28E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 PANTHER PTHR30425 382 500 4.0E-151 T 22-04-2016 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 PANTHER PTHR30425 565 734 4.0E-151 T 22-04-2016 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 PANTHER PTHR30425:SF3 382 500 4.0E-151 T 22-04-2016 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 PANTHER PTHR30425:SF3 565 734 4.0E-151 T 22-04-2016 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 Gene3D G3DSA:1.10.3720.10 33 54 6.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 Gene3D G3DSA:1.10.3720.10 416 515 6.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 Gene3D G3DSA:1.10.3720.10 516 732 2.6E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 1.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 SUPERFAMILY SSF161098 418 530 5.72E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 SUPERFAMILY SSF161098 502 720 1.83E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 SUPERFAMILY SSF69322 223 379 2.75E-7 T 22-04-2016 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 SUPERFAMILY SSF69322 69 98 2.75E-7 T 22-04-2016 VPUCM_RS02845 49e291910003390dd012568b312ade11 734 SUPERFAMILY SSF69322 140 195 2.75E-7 T 22-04-2016 VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 Gene3D G3DSA:3.90.1150.10 2 58 1.0E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 Gene3D G3DSA:3.90.1150.10 319 420 1.0E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 Gene3D G3DSA:3.40.640.10 59 317 3.2E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 PANTHER PTHR11986:SF17 4 423 3.7E-183 T 22-04-2016 VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 Pfam PF00202 Aminotransferase class-III 24 419 1.7E-128 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 PANTHER PTHR11986 4 423 3.7E-183 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 SUPERFAMILY SSF53383 18 419 2.16E-131 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS09190 bda97977448587dcd863124240ca2058 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 418 2.1E-175 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 VPUCM_RS06360 5e574226282986cc10d22760ec2aef27 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 1.0E-7 T 22-04-2016 IPR012639 Tryptophan operon leader peptide VPUCM_RS06360 5e574226282986cc10d22760ec2aef27 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 5.0E-31 T 22-04-2016 IPR012639 Tryptophan operon leader peptide VPUCM_RS02540 aefb5e9c9e6a9df4b024f587f5fe6cb4 344 PANTHER PTHR11732:SF112 1 137 2.0E-201 T 22-04-2016 VPUCM_RS02540 aefb5e9c9e6a9df4b024f587f5fe6cb4 344 PANTHER PTHR11732:SF112 155 344 2.0E-201 T 22-04-2016 VPUCM_RS02540 aefb5e9c9e6a9df4b024f587f5fe6cb4 344 PANTHER PTHR11732 1 137 2.0E-201 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VPUCM_RS02540 aefb5e9c9e6a9df4b024f587f5fe6cb4 344 PANTHER PTHR11732 155 344 2.0E-201 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VPUCM_RS02540 aefb5e9c9e6a9df4b024f587f5fe6cb4 344 Pfam PF00248 Aldo/keto reductase family 15 335 1.4E-75 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VPUCM_RS02540 aefb5e9c9e6a9df4b024f587f5fe6cb4 344 SUPERFAMILY SSF51430 1 343 1.83E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VPUCM_RS02540 aefb5e9c9e6a9df4b024f587f5fe6cb4 344 Gene3D G3DSA:3.20.20.100 1 342 6.0E-107 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 SMART SM00228 256 338 4.9E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 SUPERFAMILY SSF50494 43 265 5.06E-62 T 22-04-2016 IPR009003 Peptidase S1, PA clan VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 Pfam PF13365 Trypsin-like peptidase domain 82 215 4.8E-33 T 22-04-2016 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.30.42.10 258 352 1.8E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 PANTHER PTHR22939 1 351 4.1E-155 T 22-04-2016 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 Pfam PF13180 PDZ domain 257 346 4.0E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 SUPERFAMILY SSF50156 239 346 6.05E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.40.10.10 146 257 4.3E-38 T 22-04-2016 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.40.10.10 39 145 4.4E-35 T 22-04-2016 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 1.2E-46 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 PANTHER PTHR22939:SF93 1 351 4.1E-155 T 22-04-2016 VPUCM_RS02140 04ae05ff14e3b85d23d2f460fc023209 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 1.2E-166 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VPUCM_RS15685 987704c7f830953b6f9ae526f96bd1db 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 4.7E-87 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 VPUCM_RS15685 987704c7f830953b6f9ae526f96bd1db 304 PANTHER PTHR22911:SF41 4 304 4.4E-151 T 22-04-2016 VPUCM_RS15685 987704c7f830953b6f9ae526f96bd1db 304 Pfam PF00892 EamA-like transporter family 12 145 1.6E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS15685 987704c7f830953b6f9ae526f96bd1db 304 PANTHER PTHR22911 4 304 4.4E-151 T 22-04-2016 VPUCM_RS15685 987704c7f830953b6f9ae526f96bd1db 304 SUPERFAMILY SSF103481 50 146 6.93E-14 T 22-04-2016 VPUCM_RS15685 987704c7f830953b6f9ae526f96bd1db 304 SUPERFAMILY SSF103481 190 291 4.05E-9 T 22-04-2016 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 537 1.0E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 SUPERFAMILY SSF58104 246 539 1.83E-69 T 22-04-2016 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 SMART SM00283 277 538 1.8E-70 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 SMART SM01049 30 124 8.3E-20 T 22-04-2016 IPR033480 Single Cache domain 2 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 3.0E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 3.0E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 3.0E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 PANTHER PTHR32089 8 541 1.5E-216 T 22-04-2016 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 Pfam PF17200 Single Cache domain 2 36 185 3.0E-34 T 22-04-2016 IPR033480 Single Cache domain 2 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 Gene3D G3DSA:1.10.287.950 292 504 3.7E-56 T 22-04-2016 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 PANTHER PTHR32089:SF31 8 541 1.5E-216 T 22-04-2016 VPUCM_RS13625 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 Gene3D G3DSA:3.30.450.20 18 178 8.8E-34 T 22-04-2016 VPUCM_RS01345 e86aee15b9030a79d02cc79a39d171e4 292 PANTHER PTHR22572 4 283 1.5E-100 T 22-04-2016 VPUCM_RS01345 e86aee15b9030a79d02cc79a39d171e4 292 Gene3D G3DSA:3.90.550.10 3 272 1.4E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01345 e86aee15b9030a79d02cc79a39d171e4 292 Pfam PF00483 Nucleotidyl transferase 9 265 1.8E-31 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VPUCM_RS01345 e86aee15b9030a79d02cc79a39d171e4 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.7E-123 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VPUCM_RS01345 e86aee15b9030a79d02cc79a39d171e4 292 SUPERFAMILY SSF53448 2 271 1.11E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01345 e86aee15b9030a79d02cc79a39d171e4 292 PANTHER PTHR22572:SF14 4 283 1.5E-100 T 22-04-2016 VPUCM_RS08985 f8e7978735a105131586818f6b74109c 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 317 8.1E-51 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 VPUCM_RS08985 f8e7978735a105131586818f6b74109c 335 Gene3D G3DSA:3.40.190.100 117 267 1.3E-53 T 22-04-2016 VPUCM_RS08985 f8e7978735a105131586818f6b74109c 335 SUPERFAMILY SSF53850 28 332 9.77E-89 T 22-04-2016 VPUCM_RS08985 f8e7978735a105131586818f6b74109c 335 Gene3D G3DSA:3.40.190.10 268 334 2.6E-53 T 22-04-2016 VPUCM_RS08985 f8e7978735a105131586818f6b74109c 335 Gene3D G3DSA:3.40.190.10 28 116 2.6E-53 T 22-04-2016 VPUCM_RS13485 0038a89848645744c1974e6ffe77a7e6 165 Pfam PF10263 SprT-like family 16 158 8.7E-28 T 22-04-2016 IPR006640 SprT-like VPUCM_RS13485 0038a89848645744c1974e6ffe77a7e6 165 PANTHER PTHR38773 1 165 3.3E-80 T 22-04-2016 VPUCM_RS13485 0038a89848645744c1974e6ffe77a7e6 165 SMART SM00731 11 160 2.6E-54 T 22-04-2016 IPR006640 SprT-like VPUCM_RS13485 0038a89848645744c1974e6ffe77a7e6 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.603 T 22-04-2016 IPR023483 Uncharacterised protein family SprT VPUCM_RS07925 f786868468671df9d0f667bf2e44bc57 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 2.5E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS07925 f786868468671df9d0f667bf2e44bc57 232 Gene3D G3DSA:1.10.3720.10 18 227 3.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS07925 f786868468671df9d0f667bf2e44bc57 232 PANTHER PTHR30183:SF4 1 232 2.0E-106 T 22-04-2016 VPUCM_RS07925 f786868468671df9d0f667bf2e44bc57 232 SUPERFAMILY SSF161098 15 222 1.7E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS07925 f786868468671df9d0f667bf2e44bc57 232 PANTHER PTHR30183 1 232 2.0E-106 T 22-04-2016 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 Gene3D G3DSA:3.40.50.10490 11 191 1.8E-54 T 22-04-2016 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 Pfam PF00571 CBS domain 211 258 1.2E-4 T 22-04-2016 IPR000644 CBS domain VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 Pfam PF00571 CBS domain 268 320 1.2E-6 T 22-04-2016 IPR000644 CBS domain VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 Gene3D G3DSA:3.10.580.10 192 320 1.4E-37 T 22-04-2016 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 PANTHER PTHR38418 9 205 4.7E-40 T 22-04-2016 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 SUPERFAMILY SSF53697 11 282 6.45E-69 T 22-04-2016 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 SMART SM00116 275 322 4.4 T 22-04-2016 IPR000644 CBS domain VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 SMART SM00116 210 258 0.72 T 22-04-2016 IPR000644 CBS domain VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.5E-112 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 PIRSF PIRSF004692 2 323 6.1E-132 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 SUPERFAMILY SSF54631 262 320 5.65E-8 T 22-04-2016 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 Pfam PF01380 SIS domain 41 172 5.1E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VPUCM_RS13955 0cfdce98ddd0a67687fddf863fdbdce0 323 PANTHER PTHR38418:SF1 9 205 4.7E-40 T 22-04-2016 VPUCM_RS11200 bb54efe6229c90d6f716303d325f1057 559 PANTHER PTHR30221 276 552 1.8E-89 T 22-04-2016 VPUCM_RS11200 bb54efe6229c90d6f716303d325f1057 559 Pfam PF00924 Mechanosensitive ion channel 350 542 2.6E-54 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VPUCM_RS11200 bb54efe6229c90d6f716303d325f1057 559 Gene3D G3DSA:3.30.70.100 457 540 9.9E-28 T 22-04-2016 VPUCM_RS11200 bb54efe6229c90d6f716303d325f1057 559 SUPERFAMILY SSF50182 387 453 2.22E-18 T 22-04-2016 IPR010920 LSM domain VPUCM_RS11200 bb54efe6229c90d6f716303d325f1057 559 SUPERFAMILY SSF82861 300 386 7.19E-14 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VPUCM_RS11200 bb54efe6229c90d6f716303d325f1057 559 Gene3D G3DSA:2.30.30.60 403 452 1.2E-18 T 22-04-2016 VPUCM_RS11200 bb54efe6229c90d6f716303d325f1057 559 PANTHER PTHR30221:SF1 276 552 1.8E-89 T 22-04-2016 VPUCM_RS11200 bb54efe6229c90d6f716303d325f1057 559 SUPERFAMILY SSF82689 456 552 1.57E-31 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 SUPERFAMILY SSF50891 1 162 2.78E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 Gene3D G3DSA:2.40.100.10 2 162 2.2E-54 T 22-04-2016 IPR029000 Cyclophilin-like domain VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 PANTHER PTHR11071:SF192 1 164 4.3E-81 T 22-04-2016 VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 PANTHER PTHR11071 1 164 4.3E-81 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.9E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.9E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.9E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 PIRSF PIRSF001467 1 163 2.0E-28 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VPUCM_RS06175 4d5614345d60b6b28699cdbd47a24997 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 2.8E-49 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VPUCM_RS10145 6ebb11f52f109875aa58ce4c541957de 129 PANTHER PTHR33885 1 126 2.6E-25 T 22-04-2016 VPUCM_RS10145 6ebb11f52f109875aa58ce4c541957de 129 Pfam PF04024 PspC domain 4 62 9.6E-16 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal VPUCM_RS10145 6ebb11f52f109875aa58ce4c541957de 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 9.2E-48 T 22-04-2016 IPR014320 Phage shock protein, PspC VPUCM_RS05405 de1a19b0f74f0d9a7b6848108c45f77e 244 SUPERFAMILY SSF75217 94 243 9.16E-34 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VPUCM_RS05405 de1a19b0f74f0d9a7b6848108c45f77e 244 Gene3D G3DSA:3.30.1330.30 1 93 5.8E-26 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VPUCM_RS05405 de1a19b0f74f0d9a7b6848108c45f77e 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 2.4E-29 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VPUCM_RS05405 de1a19b0f74f0d9a7b6848108c45f77e 244 PANTHER PTHR12029 3 243 4.4E-44 T 22-04-2016 VPUCM_RS05405 de1a19b0f74f0d9a7b6848108c45f77e 244 SUPERFAMILY SSF55315 4 93 3.77E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VPUCM_RS05405 de1a19b0f74f0d9a7b6848108c45f77e 244 Gene3D G3DSA:3.40.1280.10 95 243 8.1E-38 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VPUCM_RS12890 1cb3e7732bdff359d89e1a824fe577ea 337 PIRSF PIRSF002825 1 337 2.5E-102 T 22-04-2016 IPR026045 Ferric binding protein VPUCM_RS12890 1cb3e7732bdff359d89e1a824fe577ea 337 PANTHER PTHR30006 1 337 7.6E-183 T 22-04-2016 VPUCM_RS12890 1cb3e7732bdff359d89e1a824fe577ea 337 Gene3D G3DSA:3.40.190.10 120 284 2.2E-62 T 22-04-2016 VPUCM_RS12890 1cb3e7732bdff359d89e1a824fe577ea 337 Gene3D G3DSA:3.40.190.10 22 114 4.8E-20 T 22-04-2016 VPUCM_RS12890 1cb3e7732bdff359d89e1a824fe577ea 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 1.0E-19 T 22-04-2016 VPUCM_RS12890 1cb3e7732bdff359d89e1a824fe577ea 337 SUPERFAMILY SSF53850 24 332 6.14E-77 T 22-04-2016 VPUCM_RS12890 1cb3e7732bdff359d89e1a824fe577ea 337 PANTHER PTHR30006:SF4 1 337 7.6E-183 T 22-04-2016 VPUCM_RS02550 647335737b3ec683918c5247df28e666 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 3.7E-100 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VPUCM_RS02550 647335737b3ec683918c5247df28e666 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.5E-34 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VPUCM_RS02550 647335737b3ec683918c5247df28e666 226 SMART SM00927 53 151 5.7E-65 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VPUCM_RS02550 647335737b3ec683918c5247df28e666 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 145.53 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VPUCM_RS02550 647335737b3ec683918c5247df28e666 226 Gene3D G3DSA:3.40.600.10 3 221 1.1E-79 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VPUCM_RS02550 647335737b3ec683918c5247df28e666 226 SUPERFAMILY SSF52980 2 220 3.06E-80 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS15875 935d3acfe2e992a6ee412280b45a887d 364 SMART SM00257 39 87 1.8E-4 T 22-04-2016 IPR018392 LysM domain VPUCM_RS15875 935d3acfe2e992a6ee412280b45a887d 364 PANTHER PTHR34700:SF2 1 353 1.2E-77 T 22-04-2016 VPUCM_RS15875 935d3acfe2e992a6ee412280b45a887d 364 SUPERFAMILY SSF54106 38 86 8.89E-7 T 22-04-2016 IPR018392 LysM domain VPUCM_RS15875 935d3acfe2e992a6ee412280b45a887d 364 Pfam PF01476 LysM domain 40 85 1.8E-11 T 22-04-2016 IPR018392 LysM domain VPUCM_RS15875 935d3acfe2e992a6ee412280b45a887d 364 Gene3D G3DSA:3.10.350.10 37 86 2.7E-7 T 22-04-2016 IPR018392 LysM domain VPUCM_RS15875 935d3acfe2e992a6ee412280b45a887d 364 PANTHER PTHR34700 1 353 1.2E-77 T 22-04-2016 VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 Pfam PF00437 Type II/IV secretion system protein 127 392 4.9E-88 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 SUPERFAMILY SSF160246 12 78 2.88E-17 T 22-04-2016 VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 PANTHER PTHR30258:SF9 3 499 0.0 T 22-04-2016 VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 SMART SM00382 253 376 5.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 PANTHER PTHR30258 3 499 0.0 T 22-04-2016 VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 Gene3D G3DSA:3.30.450.90 92 225 8.3E-56 T 22-04-2016 VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 1.2E-226 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 SUPERFAMILY SSF52540 107 497 1.28E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00670 0faac9abd49143049d651a6a5f3bad8c 500 Gene3D G3DSA:3.40.50.300 228 498 2.7E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 PANTHER PTHR11695:SF294 17 314 4.8E-83 T 22-04-2016 VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 Gene3D G3DSA:3.40.50.720 154 238 3.4E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 SUPERFAMILY SSF50129 4 154 3.65E-35 T 22-04-2016 IPR011032 GroES-like VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 Gene3D G3DSA:3.90.180.10 3 153 1.2E-42 T 22-04-2016 IPR011032 GroES-like VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 SUPERFAMILY SSF51735 123 243 1.03E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 1.8E-19 T 22-04-2016 VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 PANTHER PTHR11695 17 314 4.8E-83 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 SMART SM00829 12 312 1.6E-13 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VPUCM_RS13125 f41eafd90f0e5563e027383e7ba4a980 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 92 2.2E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VPUCM_RS07325 23889be15c05225871412461442209b0 95 Gene3D G3DSA:3.40.630.30 8 90 4.0E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07325 23889be15c05225871412461442209b0 95 SUPERFAMILY SSF55729 8 91 1.92E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07325 23889be15c05225871412461442209b0 95 Pfam PF00583 Acetyltransferase (GNAT) family 12 69 1.7E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 SUPERFAMILY SSF46785 9 76 1.76E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.4E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 Gene3D G3DSA:1.10.10.10 8 73 8.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 Gene3D G3DSA:1.20.120.530 75 219 1.6E-37 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 PANTHER PTHR11751 7 98 1.5E-28 T 22-04-2016 VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 PANTHER PTHR11751:SF436 7 98 1.5E-28 T 22-04-2016 VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 SMART SM00895 82 207 2.9E-20 T 22-04-2016 IPR011711 GntR, C-terminal VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 Pfam PF07729 FCD domain 82 206 1.6E-25 T 22-04-2016 IPR011711 GntR, C-terminal VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 SMART SM00345 14 72 1.5E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS09415 e4413c912583b2a5b8869524feb816be 224 SUPERFAMILY SSF48008 78 214 3.66E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 PANTHER PTHR24221 4 60 0.0 T 22-04-2016 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 PANTHER PTHR24221 78 592 0.0 T 22-04-2016 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 Pfam PF00664 ABC transporter transmembrane region 25 312 6.8E-30 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 PANTHER PTHR24221:SF233 4 60 0.0 T 22-04-2016 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 PANTHER PTHR24221:SF233 78 592 0.0 T 22-04-2016 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 Gene3D G3DSA:3.40.50.300 361 592 3.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 SUPERFAMILY SSF52540 356 591 9.4E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 SUPERFAMILY SSF90123 12 343 3.27E-57 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 Gene3D G3DSA:1.20.1560.10 12 342 1.5E-54 T 22-04-2016 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 Pfam PF00005 ABC transporter 376 524 2.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS08390 b151681c86216e2e12b3dec09d816b28 598 SMART SM00382 385 572 3.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 SUPERFAMILY SSF64518 3 397 2.48E-68 T 22-04-2016 VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 PANTHER PTHR30244:SF5 3 187 9.8E-91 T 22-04-2016 VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 PANTHER PTHR30244:SF5 225 397 9.8E-91 T 22-04-2016 VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 1.8E-94 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.0E-12 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 Gene3D G3DSA:1.20.1330.10 57 170 1.7E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 Gene3D G3DSA:1.20.1330.10 302 355 1.7E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 PANTHER PTHR30244 3 187 9.8E-91 T 22-04-2016 VPUCM_RS12095 99e5430eb9f16f45af0ae5382df325c9 397 PANTHER PTHR30244 225 397 9.8E-91 T 22-04-2016 VPUCM_RS10870 a9f6612c1e3ebe6ae82ace003f41ab19 158 PANTHER PTHR35603 27 157 3.3E-25 T 22-04-2016 VPUCM_RS10870 a9f6612c1e3ebe6ae82ace003f41ab19 158 Pfam PF05433 Glycine zipper 2TM domain 63 100 1.7E-9 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 VPUCM_RS04675 8e05b73b8a6318aa812f9515248a1585 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 5.5E-27 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VPUCM_RS04675 8e05b73b8a6318aa812f9515248a1585 169 PANTHER PTHR35089 2 168 3.4E-47 T 22-04-2016 VPUCM_RS04675 8e05b73b8a6318aa812f9515248a1585 169 PANTHER PTHR35089:SF1 2 168 3.4E-47 T 22-04-2016 VPUCM_RS04675 8e05b73b8a6318aa812f9515248a1585 169 SMART SM00935 15 169 9.1E-43 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VPUCM_RS04675 8e05b73b8a6318aa812f9515248a1585 169 Gene3D G3DSA:3.30.910.20 101 169 4.4E-32 T 22-04-2016 VPUCM_RS04675 8e05b73b8a6318aa812f9515248a1585 169 Gene3D G3DSA:3.30.910.20 17 63 4.4E-32 T 22-04-2016 VPUCM_RS04675 8e05b73b8a6318aa812f9515248a1585 169 SUPERFAMILY SSF111384 26 169 1.7E-31 T 22-04-2016 IPR024930 Skp domain VPUCM_RS04675 8e05b73b8a6318aa812f9515248a1585 169 PIRSF PIRSF002094 1 169 3.5E-41 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 2.8E-48 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 PANTHER PTHR10889 5 253 4.8E-115 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.842 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 Gene3D G3DSA:3.20.20.70 3 247 1.3E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 SUPERFAMILY SSF51569 6 245 1.15E-82 T 22-04-2016 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 SMART SM01133 10 244 1.3E-78 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 8.5E-81 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 PANTHER PTHR10889:SF3 5 253 4.8E-115 T 22-04-2016 VPUCM_RS04055 5c40e574ea2742f9cba8e6a6642507af 258 PIRSF PIRSF001357 5 251 1.3E-76 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 9.0E-105 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 Pfam PF04055 Radical SAM superfamily 19 181 2.4E-26 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 SMART SM00729 14 214 1.3E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 PANTHER PTHR22960 7 285 1.4E-125 T 22-04-2016 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 SUPERFAMILY SSF102114 6 289 7.06E-70 T 22-04-2016 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.0E-8 T 22-04-2016 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 Gene3D G3DSA:3.20.20.70 5 307 6.0E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 36.908 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS05645 93060d41961d1aa3344ccd3b25145c64 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 4.9E-39 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS03345 4d4ff6b9a0c736f7d5cf5d479146f12e 281 Gene3D G3DSA:1.10.357.20 99 279 8.9E-53 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VPUCM_RS03345 4d4ff6b9a0c736f7d5cf5d479146f12e 281 PANTHER PTHR41394 72 281 6.8E-29 T 22-04-2016 VPUCM_RS03345 4d4ff6b9a0c736f7d5cf5d479146f12e 281 SUPERFAMILY SSF161093 99 278 1.23E-44 T 22-04-2016 VPUCM_RS03345 4d4ff6b9a0c736f7d5cf5d479146f12e 281 Pfam PF01769 Divalent cation transporter 142 272 3.8E-27 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 2.1E-187 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:3.40.50.300 124 297 3.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF00308 Bacterial dnaA protein 134 350 3.3E-98 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 SMART SM00382 165 378 4.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PANTHER PTHR30050 131 468 1.1E-246 T 22-04-2016 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PANTHER PTHR30050 1 104 1.1E-246 T 22-04-2016 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF11638 DnaA N-terminal domain 4 65 1.9E-19 T 22-04-2016 IPR024633 DnaA N-terminal domain VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:1.10.8.60 299 366 1.1E-30 T 22-04-2016 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PANTHER PTHR30050:SF2 131 468 1.1E-246 T 22-04-2016 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 PANTHER PTHR30050:SF2 1 104 1.1E-246 T 22-04-2016 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 SMART SM00760 376 445 3.4E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 SUPERFAMILY SSF52540 133 344 1.07E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:1.10.1750.10 367 467 8.0E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VPUCM_RS00045 ad5be436e8c39ea2deb69565d8b1fd60 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.548 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VPUCM_RS00890 87e54eafcf5aa6a6946c09cc118b6db6 62 SUPERFAMILY SSF46955 7 57 4.21E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain VPUCM_RS00890 87e54eafcf5aa6a6946c09cc118b6db6 62 Gene3D G3DSA:1.10.10.10 9 56 2.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00890 87e54eafcf5aa6a6946c09cc118b6db6 62 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 6 54 1.9E-8 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 Pfam PF11842 Domain of unknown function (DUF3362) 585 723 3.2E-42 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 1.2E-262 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 Pfam PF04055 Radical SAM superfamily 371 576 6.8E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 SMART SM00729 367 617 1.6E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 Pfam PF08497 Radical SAM N-terminal 24 370 6.4E-143 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 SUPERFAMILY SSF102114 370 431 4.58E-11 T 22-04-2016 VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 SUPERFAMILY SSF102114 461 605 4.58E-11 T 22-04-2016 VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 PANTHER PTHR32331 3 716 0.0 T 22-04-2016 VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 686 48.107 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 Gene3D G3DSA:3.80.30.20 365 614 2.8E-47 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 PANTHER PTHR32331:SF3 3 716 0.0 T 22-04-2016 VPUCM_RS06250 60ad6afde636ca02163a4627fce93be6 777 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 Gene3D G3DSA:3.40.50.880 4 214 4.2E-64 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.514 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 Gene3D G3DSA:3.40.50.620 215 391 7.9E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.1E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 7.8E-156 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 Pfam PF02540 NAD synthase 212 284 1.5E-7 T 22-04-2016 IPR022310 NAD/GMP synthase VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 Gene3D G3DSA:3.30.300.10 393 517 3.5E-53 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.8E-84 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 SUPERFAMILY SSF52402 189 412 2.87E-58 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 7.2E-43 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PANTHER PTHR11922:SF2 3 514 1.0E-297 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 PANTHER PTHR11922 3 514 1.0E-297 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 SUPERFAMILY SSF54810 397 517 6.93E-51 T 22-04-2016 VPUCM_RS03045 7ee40deb1add3cebf2c8b0b3e2783e86 517 SUPERFAMILY SSF52317 5 196 1.19E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS03315 5da21e028adb260d2c454bc7eced0573 170 Pfam PF12019 Type II transport protein GspH 41 138 7.3E-8 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VPUCM_RS03315 5da21e028adb260d2c454bc7eced0573 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 6.8E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS03315 5da21e028adb260d2c454bc7eced0573 170 SUPERFAMILY SSF54523 5 93 3.3E-13 T 22-04-2016 VPUCM_RS03315 5da21e028adb260d2c454bc7eced0573 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS03315 5da21e028adb260d2c454bc7eced0573 170 PIRSF PIRSF024622 1 170 3.1E-63 T 22-04-2016 IPR016824 Tfp pilus assembly protein FimT VPUCM_RS07670 451e0b694115e6dcae23f5d4ce3b8256 157 PANTHER PTHR23091 1 157 3.0E-19 T 22-04-2016 VPUCM_RS07670 451e0b694115e6dcae23f5d4ce3b8256 157 SUPERFAMILY SSF55729 1 154 1.72E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07670 451e0b694115e6dcae23f5d4ce3b8256 157 Gene3D G3DSA:3.40.630.30 1 155 4.0E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07670 451e0b694115e6dcae23f5d4ce3b8256 157 Pfam PF13673 Acetyltransferase (GNAT) domain 29 150 1.1E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 PIRSF PIRSF000149 1 331 1.0E-115 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 2.6E-51 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 1.9E-119 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 PANTHER PTHR10836 1 330 3.0E-225 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 SUPERFAMILY SSF51735 1 173 1.84E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 PANTHER PTHR10836:SF37 1 330 3.0E-225 T 22-04-2016 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 SMART SM00846 3 152 9.6E-73 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 SUPERFAMILY SSF55347 152 314 3.57E-63 T 22-04-2016 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 Gene3D G3DSA:3.40.50.720 2 160 2.5E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 6.3E-59 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 Gene3D G3DSA:3.30.360.10 161 315 1.7E-66 T 22-04-2016 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.1E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.1E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.1E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.1E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS15505 3fc86b771d19301b6d2644a56696f3fa 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.1E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 PANTHER PTHR30093:SF9 4 146 7.1E-73 T 22-04-2016 VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 28 5.2E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 PANTHER PTHR30093 4 146 7.1E-73 T 22-04-2016 VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 SUPERFAMILY SSF54523 36 142 3.19E-38 T 22-04-2016 VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 8.2E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 Gene3D G3DSA:3.30.700.10 11 75 9.2E-9 T 22-04-2016 VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.1E-42 T 22-04-2016 IPR013545 Type II secretion system protein G VPUCM_RS00680 c4bc8d99aaa3b679036114ba89e51a3f 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.7E-57 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VPUCM_RS07545 841fd20fe5f52a1956ecdb321c9c2245 300 PANTHER PTHR30128 95 277 1.3E-24 T 22-04-2016 VPUCM_RS07545 841fd20fe5f52a1956ecdb321c9c2245 300 Pfam PF00691 OmpA family 167 261 1.2E-19 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS07545 841fd20fe5f52a1956ecdb321c9c2245 300 PRINTS PR01021 OMPA domain signature 212 228 5.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS07545 841fd20fe5f52a1956ecdb321c9c2245 300 PRINTS PR01021 OMPA domain signature 167 189 5.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS07545 841fd20fe5f52a1956ecdb321c9c2245 300 PRINTS PR01021 OMPA domain signature 197 212 5.4E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS07545 841fd20fe5f52a1956ecdb321c9c2245 300 SUPERFAMILY SSF103088 156 267 3.27E-29 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS07545 841fd20fe5f52a1956ecdb321c9c2245 300 Gene3D G3DSA:3.30.1330.60 163 269 1.5E-27 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 PANTHER PTHR30118 14 319 1.8E-152 T 22-04-2016 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 189 281 1.1E-15 T 22-04-2016 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 SUPERFAMILY SSF53850 106 309 2.53E-39 T 22-04-2016 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 Pfam PF03466 LysR substrate binding domain 121 307 2.3E-23 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 PANTHER PTHR30118:SF6 14 319 1.8E-152 T 22-04-2016 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 287 315 6.9E-25 T 22-04-2016 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 106 188 6.9E-25 T 22-04-2016 VPUCM_RS01865 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:1.10.10.10 17 101 4.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF54292 38 124 1.06E-21 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:3.10.20.30 34 123 9.0E-21 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PIRSF PIRSF000044 1 407 4.8E-219 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PANTHER PTHR19370:SF32 62 176 5.3E-145 T 22-04-2016 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PANTHER PTHR19370:SF32 205 407 5.3E-145 T 22-04-2016 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.814 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF63380 105 272 3.08E-36 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.7E-16 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PANTHER PTHR19370 62 176 5.3E-145 T 22-04-2016 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PANTHER PTHR19370 205 407 5.3E-145 T 22-04-2016 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF52343 258 402 9.82E-36 T 22-04-2016 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.4E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 6.6E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 4.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:3.40.50.80 269 406 6.3E-41 T 22-04-2016 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:2.40.30.10 124 264 1.6E-62 T 22-04-2016 VPUCM_RS04500 344cef93d718ea5c34938b324ea442b5 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.1E-229 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VPUCM_RS14710 ece949a7466773d6cf19313cea09add0 154 Gene3D G3DSA:3.40.50.300 4 150 3.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14710 ece949a7466773d6cf19313cea09add0 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 9.9E-44 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VPUCM_RS14710 ece949a7466773d6cf19313cea09add0 154 PANTHER PTHR33540 1 152 1.6E-55 T 22-04-2016 VPUCM_RS14710 ece949a7466773d6cf19313cea09add0 154 PANTHER PTHR33540:SF2 1 152 1.6E-55 T 22-04-2016 VPUCM_RS14710 ece949a7466773d6cf19313cea09add0 154 SUPERFAMILY SSF52540 27 151 5.8E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14710 ece949a7466773d6cf19313cea09add0 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 2.8E-53 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VPUCM_RS14955 ab2fc91b2d66ba86f84b30ba2d9c8efc 170 PANTHER PTHR38102:SF1 2 170 3.7E-36 T 22-04-2016 VPUCM_RS14955 ab2fc91b2d66ba86f84b30ba2d9c8efc 170 PIRSF PIRSF034445 2 159 1.3E-21 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VPUCM_RS14955 ab2fc91b2d66ba86f84b30ba2d9c8efc 170 Pfam PF07813 LTXXQ motif family protein 39 149 8.0E-25 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VPUCM_RS14955 ab2fc91b2d66ba86f84b30ba2d9c8efc 170 PANTHER PTHR38102 2 170 3.7E-36 T 22-04-2016 VPUCM_RS04900 2411e05576e0397ec9b37b9861271b6b 270 SUPERFAMILY SSF52540 1 268 7.57E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04900 2411e05576e0397ec9b37b9861271b6b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 4.2E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VPUCM_RS04900 2411e05576e0397ec9b37b9861271b6b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.3E-109 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 VPUCM_RS04900 2411e05576e0397ec9b37b9861271b6b 270 PANTHER PTHR13696 1 258 2.2E-91 T 22-04-2016 VPUCM_RS04900 2411e05576e0397ec9b37b9861271b6b 270 Gene3D G3DSA:3.40.50.300 1 248 6.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04900 2411e05576e0397ec9b37b9861271b6b 270 PANTHER PTHR13696:SF1 1 258 2.2E-91 T 22-04-2016 VPUCM_RS04900 2411e05576e0397ec9b37b9861271b6b 270 PIRSF PIRSF003092 1 270 3.9E-93 T 22-04-2016 IPR025501 ATP binding protein MinD VPUCM_RS02670 b97e56ad57dd487d976c3722d442077d 327 PANTHER PTHR30480 4 287 9.8E-120 T 22-04-2016 VPUCM_RS02670 b97e56ad57dd487d976c3722d442077d 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 44.777 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 VPUCM_RS02670 b97e56ad57dd487d976c3722d442077d 327 Gene3D G3DSA:3.20.20.300 3 284 4.2E-90 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VPUCM_RS02670 b97e56ad57dd487d976c3722d442077d 327 PANTHER PTHR30480:SF7 4 287 9.8E-120 T 22-04-2016 VPUCM_RS02670 b97e56ad57dd487d976c3722d442077d 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 286 1.7E-83 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VPUCM_RS02670 b97e56ad57dd487d976c3722d442077d 327 SUPERFAMILY SSF51445 2 286 3.16E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS02670 b97e56ad57dd487d976c3722d442077d 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 Gene3D G3DSA:3.90.1150.10 306 400 4.4E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 Gene3D G3DSA:3.90.1150.10 14 59 4.4E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 SUPERFAMILY SSF53383 16 399 1.48E-129 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 PANTHER PTHR11986 12 403 9.7E-195 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.785 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 1.2E-147 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 Gene3D G3DSA:3.40.640.10 60 302 3.5E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.1E-206 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 Pfam PF00202 Aminotransferase class-III 22 399 2.1E-125 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS14610 617d971f7baa2a96b4ce16ddcbfd0fd3 403 PANTHER PTHR11986:SF71 12 403 9.7E-195 T 22-04-2016 VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 Gene3D G3DSA:3.30.63.10 43 87 1.7E-30 T 22-04-2016 VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.259 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 SUPERFAMILY SSF52540 3 189 1.86E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.8E-76 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 PANTHER PTHR23117 1 200 2.4E-103 T 22-04-2016 VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 Gene3D G3DSA:3.40.50.300 18 42 6.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 PANTHER PTHR23117:SF13 1 200 2.4E-103 T 22-04-2016 VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 SMART SM00072 3 187 1.3E-77 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 Gene3D G3DSA:3.40.50.300 2 17 1.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 Gene3D G3DSA:3.40.50.300 88 203 1.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00810 f29b5dfabeb78a109c5292325c04db9d 207 Pfam PF00625 Guanylate kinase 5 185 2.5E-63 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VPUCM_RS05230 efcabeed6a1c0e099ca849bcaab3da4e 290 Pfam PF04280 Tim44-like domain 168 289 9.9E-15 T 22-04-2016 IPR007379 Tim44-like domain VPUCM_RS05230 efcabeed6a1c0e099ca849bcaab3da4e 290 PANTHER PTHR41542:SF1 1 290 2.6E-82 T 22-04-2016 VPUCM_RS05230 efcabeed6a1c0e099ca849bcaab3da4e 290 Pfam PF07466 Protein of unknown function (DUF1517) 28 125 1.3E-5 T 22-04-2016 IPR010903 Protein of unknown function DUF1517 VPUCM_RS05230 efcabeed6a1c0e099ca849bcaab3da4e 290 SUPERFAMILY SSF54427 169 289 1.45E-16 T 22-04-2016 IPR032710 NTF2-like domain VPUCM_RS05230 efcabeed6a1c0e099ca849bcaab3da4e 290 PANTHER PTHR41542 1 290 2.6E-82 T 22-04-2016 VPUCM_RS05230 efcabeed6a1c0e099ca849bcaab3da4e 290 SMART SM00978 159 290 5.1E-36 T 22-04-2016 IPR007379 Tim44-like domain VPUCM_RS11170 c962f5a61cbdf967b9cb09f1c723d697 315 SUPERFAMILY SSF159501 32 282 2.3E-74 T 22-04-2016 VPUCM_RS11170 c962f5a61cbdf967b9cb09f1c723d697 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 55 255 2.8E-60 T 22-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VPUCM_RS11170 c962f5a61cbdf967b9cb09f1c723d697 315 PANTHER PTHR31620:SF8 35 271 3.8E-15 T 22-04-2016 VPUCM_RS11170 c962f5a61cbdf967b9cb09f1c723d697 315 PANTHER PTHR31620 35 271 3.8E-15 T 22-04-2016 VPUCM_RS11170 c962f5a61cbdf967b9cb09f1c723d697 315 PIRSF PIRSF020419 1 299 4.9E-78 T 22-04-2016 IPR016773 Ferric uptake regulator, CjrA, predicted VPUCM_RS05785 b3a366f6d684ab2c7458edae6ad0dbd2 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-69 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VPUCM_RS05785 b3a366f6d684ab2c7458edae6ad0dbd2 149 Pfam PF06610 L-alanine exporter 8 142 1.4E-69 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VPUCM_RS05785 b3a366f6d684ab2c7458edae6ad0dbd2 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.974 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 PIRSF PIRSF002134 1 118 3.4E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.813 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:1.10.8.50 1 71 2.1E-28 T 22-04-2016 VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:4.10.910.10 72 118 3.5E-27 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 PANTHER PTHR10871 1 118 3.2E-70 T 22-04-2016 VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.3E-32 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01540 e8b2fa34d117e41896678b4dde01c2be 118 SUPERFAMILY SSF46946 2 114 4.42E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 Pfam PF03600 Citrate transporter 38 526 5.7E-26 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 SUPERFAMILY SSF116726 205 287 7.06E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 Gene3D G3DSA:3.30.70.1450 299 357 1.6E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 Gene3D G3DSA:3.30.70.1450 210 290 6.5E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 SUPERFAMILY SSF116726 300 363 5.1E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 Pfam PF02080 TrkA-C domain 300 357 6.5E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 Pfam PF02080 TrkA-C domain 217 281 2.4E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 PANTHER PTHR10283 341 579 1.3E-73 T 22-04-2016 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 PANTHER PTHR10283 13 223 1.3E-73 T 22-04-2016 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 PANTHER PTHR10283:SF79 341 579 1.3E-73 T 22-04-2016 VPUCM_RS01315 5f39cd5c6fac644124e3fb127d5417e3 582 PANTHER PTHR10283:SF79 13 223 1.3E-73 T 22-04-2016 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.4E-24 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 Gene3D G3DSA:1.10.10.10 5 55 9.4E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 SMART SM00420 6 58 1.2E-27 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 PANTHER PTHR30363 1 261 1.1E-113 T 22-04-2016 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 SMART SM01134 72 234 8.8E-68 T 22-04-2016 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 PANTHER PTHR30363:SF1 1 261 1.1E-113 T 22-04-2016 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 SUPERFAMILY SSF46785 5 77 4.94E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 SUPERFAMILY SSF100950 74 234 5.39E-29 T 22-04-2016 VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.7E-50 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain VPUCM_RS04290 e85b8ae1a431f3285a019ffd56555e6a 263 Gene3D G3DSA:3.30.750.70 77 154 5.0E-14 T 22-04-2016 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 Gene3D G3DSA:3.30.572.10 2 283 8.1E-80 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 PANTHER PTHR11548 2 283 9.0E-108 T 22-04-2016 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 SUPERFAMILY SSF55831 2 283 1.44E-92 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 Pfam PF00303 Thymidylate synthase 2 283 3.0E-76 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 5.6E-44 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.504 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.5E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.5E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.5E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS02575 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.5E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 3.3E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 8.6E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 SMART SM00382 208 355 0.11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 SMART SM00382 1 174 3.5 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.7E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.215 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 PANTHER PTHR11649 1 468 1.1E-160 T 22-04-2016 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 SUPERFAMILY SSF52540 207 471 4.78E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 SUPERFAMILY SSF52540 141 170 4.78E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 PANTHER PTHR11649:SF5 1 468 1.1E-160 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 Gene3D G3DSA:3.40.50.300 204 390 3.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 Gene3D G3DSA:3.40.50.300 3 161 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 Gene3D G3DSA:3.30.300.20 391 467 3.9E-23 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 PIRSF PIRSF006485 1 473 2.6E-179 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 SUPERFAMILY SSF52540 4 164 7.29E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 4.9E-178 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VPUCM_RS03020 50f479814dde62ef9608a781a9215e8b 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 2.3E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like VPUCM_RS09585 42c450d8cca67d893c038220bf3e51fe 263 Gene3D G3DSA:2.50.20.10 27 261 1.9E-84 T 22-04-2016 VPUCM_RS09585 42c450d8cca67d893c038220bf3e51fe 263 SUPERFAMILY SSF89392 106 212 2.75E-5 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VPUCM_RS09585 42c450d8cca67d893c038220bf3e51fe 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 1.8E-66 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein VPUCM_RS04280 731974de8c23b81e2c918b59ba8fa187 315 Gene3D G3DSA:1.20.58.340 240 307 1.0E-17 T 22-04-2016 VPUCM_RS04280 731974de8c23b81e2c918b59ba8fa187 315 PANTHER PTHR21535 54 311 3.0E-18 T 22-04-2016 VPUCM_RS04280 731974de8c23b81e2c918b59ba8fa187 315 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 7.0E-48 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VPUCM_RS04280 731974de8c23b81e2c918b59ba8fa187 315 SUPERFAMILY SSF143865 25 236 5.49E-25 T 22-04-2016 VPUCM_RS04280 731974de8c23b81e2c918b59ba8fa187 315 SUPERFAMILY SSF144083 245 306 6.54E-14 T 22-04-2016 VPUCM_RS04280 731974de8c23b81e2c918b59ba8fa187 315 Gene3D G3DSA:1.20.58.340 132 225 4.9E-4 T 22-04-2016 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PRINTS PR00107 Phosphocarrier protein signature 191 206 2.0E-7 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PRINTS PR00107 Phosphocarrier protein signature 166 182 2.0E-7 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PRINTS PR00107 Phosphocarrier protein signature 206 223 2.0E-7 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 515 796 4.9E-98 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 158 233 6.6E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Gene3D G3DSA:1.10.274.10 295 391 1.1E-24 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 442 453 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 166 173 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 SUPERFAMILY SSF47831 296 402 1.22E-22 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 SUPERFAMILY SSF52009 384 503 1.28E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 719 734 1.0E-23 T 22-04-2016 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 551 570 1.0E-23 T 22-04-2016 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 755 767 1.0E-23 T 22-04-2016 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 702 717 1.0E-23 T 22-04-2016 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 126 8.1E-37 T 22-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 SUPERFAMILY SSF53062 1 127 3.66E-33 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 SUPERFAMILY SSF55594 157 240 1.44E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Gene3D G3DSA:3.50.30.10 392 509 4.7E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Pfam PF05524 PEP-utilising enzyme, N-terminal 273 385 2.2E-22 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Gene3D G3DSA:3.40.50.510 1 131 5.7E-46 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Gene3D G3DSA:3.30.1340.10 156 240 4.4E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 271 797 1.6E-139 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PANTHER PTHR22931 304 797 2.6E-156 T 22-04-2016 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Pfam PF00391 PEP-utilising enzyme, mobile domain 410 483 9.7E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 PANTHER PTHR22931:SF15 304 797 2.6E-156 T 22-04-2016 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Pfam PF00381 PTS HPr component phosphorylation site 158 234 2.7E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 SUPERFAMILY SSF51621 514 797 7.33E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Gene3D G3DSA:3.20.20.60 516 797 3.0E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS01940 a063715caf552fcda2b1d69f950e89aa 799 Pfam PF03610 PTS system fructose IIA component 3 113 3.5E-24 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VPUCM_RS08525 1fd63605a8ff3e7cf2b8a0a335288c71 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 3.1E-33 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 Pfam PF02441 Flavoprotein 12 149 2.0E-24 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 13 206 3.6E-57 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 11 208 34.845 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 Gene3D G3DSA:3.40.50.1950 12 210 1.0E-73 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 SUPERFAMILY SSF52507 11 207 5.1E-57 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 PANTHER PTHR30108 1 66 1.3E-82 T 22-04-2016 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 PANTHER PTHR30108 83 212 1.3E-82 T 22-04-2016 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 PANTHER PTHR30108:SF2 1 66 1.3E-82 T 22-04-2016 VPUCM_RS01705 d654e032c1d73648ffb2e5061f3a0a1a 212 PANTHER PTHR30108:SF2 83 212 1.3E-82 T 22-04-2016 VPUCM_RS15430 dbcc22f39d7fc94a38c4506c3cd5a524 224 Pfam PF00005 ABC transporter 18 165 2.4E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS15430 dbcc22f39d7fc94a38c4506c3cd5a524 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.5E-90 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VPUCM_RS15430 dbcc22f39d7fc94a38c4506c3cd5a524 224 Gene3D G3DSA:3.40.50.300 1 201 2.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15430 dbcc22f39d7fc94a38c4506c3cd5a524 224 PANTHER PTHR24220 3 221 3.5E-117 T 22-04-2016 VPUCM_RS15430 dbcc22f39d7fc94a38c4506c3cd5a524 224 SMART SM00382 27 215 5.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS15430 dbcc22f39d7fc94a38c4506c3cd5a524 224 SUPERFAMILY SSF52540 1 220 5.87E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15430 dbcc22f39d7fc94a38c4506c3cd5a524 224 PANTHER PTHR24220:SF470 3 221 3.5E-117 T 22-04-2016 VPUCM_RS15430 dbcc22f39d7fc94a38c4506c3cd5a524 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS05470 6974776d77cde45939c5ec184cea32bb 179 PANTHER PTHR35602 1 177 7.2E-125 T 22-04-2016 VPUCM_RS05470 6974776d77cde45939c5ec184cea32bb 179 PANTHER PTHR35602:SF2 1 177 7.2E-125 T 22-04-2016 VPUCM_RS05470 6974776d77cde45939c5ec184cea32bb 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.7E-68 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VPUCM_RS05470 6974776d77cde45939c5ec184cea32bb 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.417 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 VPUCM_RS05470 6974776d77cde45939c5ec184cea32bb 179 SUPERFAMILY SSF53474 2 176 1.98E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 Pfam PF00483 Nucleotidyl transferase 124 346 1.4E-37 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 PANTHER PTHR22572:SF114 121 349 1.0E-130 T 22-04-2016 VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 Gene3D G3DSA:3.10.580.10 5 112 3.6E-25 T 22-04-2016 VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 SUPERFAMILY SSF54631 7 56 4.59E-9 T 22-04-2016 VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 PANTHER PTHR22572 121 349 1.0E-130 T 22-04-2016 VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 SMART SM00116 6 54 0.034 T 22-04-2016 IPR000644 CBS domain VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 SMART SM00116 70 117 4.1 T 22-04-2016 IPR000644 CBS domain VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 Pfam PF00571 CBS domain 63 106 9.6E-5 T 22-04-2016 IPR000644 CBS domain VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 Pfam PF00571 CBS domain 8 54 3.7E-9 T 22-04-2016 IPR000644 CBS domain VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 Gene3D G3DSA:3.90.550.10 124 346 9.9E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01050 668fb7bc51a398307bb620b135995477 352 SUPERFAMILY SSF53448 48 346 1.76E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS09205 8c8416d6a6aabb498f6bd51f040bfe13 288 PANTHER PTHR23088 1 286 2.9E-133 T 22-04-2016 VPUCM_RS09205 8c8416d6a6aabb498f6bd51f040bfe13 288 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 3.2E-143 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 VPUCM_RS09205 8c8416d6a6aabb498f6bd51f040bfe13 288 Gene3D G3DSA:3.60.110.10 3 282 1.0E-95 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS09205 8c8416d6a6aabb498f6bd51f040bfe13 288 PANTHER PTHR23088:SF11 1 286 2.9E-133 T 22-04-2016 VPUCM_RS09205 8c8416d6a6aabb498f6bd51f040bfe13 288 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 2.5E-59 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS09205 8c8416d6a6aabb498f6bd51f040bfe13 288 SUPERFAMILY SSF56317 4 281 1.11E-83 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS05545 f447ca6c37f31eb44e18b79c3d6dcf6f 519 Pfam PF04293 SpoVR like protein 26 456 4.1E-178 T 22-04-2016 IPR007390 Sporulation stage V, protein R VPUCM_RS05545 f447ca6c37f31eb44e18b79c3d6dcf6f 519 PANTHER PTHR30029 16 519 3.9E-240 T 22-04-2016 VPUCM_RS05545 f447ca6c37f31eb44e18b79c3d6dcf6f 519 PANTHER PTHR30029:SF2 16 519 3.9E-240 T 22-04-2016 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 SMART SM00528 88 135 6.4E-26 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 Pfam PF00816 H-NS histone family 32 129 6.3E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 Gene3D G3DSA:1.10.287.1050 1 58 1.0E-17 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 SUPERFAMILY SSF81273 2 58 1.0E-16 T 22-04-2016 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 PANTHER PTHR38097 2 135 2.7E-63 T 22-04-2016 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 SUPERFAMILY SSF81273 93 135 2.12E-12 T 22-04-2016 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 PANTHER PTHR38097:SF2 2 135 2.7E-63 T 22-04-2016 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 Gene3D G3DSA:4.10.430.10 92 135 7.7E-27 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VPUCM_RS06100 bdd61b49b2eec451e7dff55d5ef28f57 135 PIRSF PIRSF002096 1 135 1.9E-55 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VPUCM_RS01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 PANTHER PTHR10286 6 172 6.0E-75 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VPUCM_RS01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.251 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VPUCM_RS01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.4E-51 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VPUCM_RS01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VPUCM_RS01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 SUPERFAMILY SSF50324 3 174 2.09E-65 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VPUCM_RS01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 Gene3D G3DSA:3.90.80.10 4 175 1.1E-58 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 SMART SM00965 182 230 7.6E-9 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 PANTHER PTHR30604 17 582 1.6E-133 T 22-04-2016 VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 563 7.8E-20 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 582 7.8E-20 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 321 331 7.8E-20 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 418 442 7.8E-20 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 PRINTS PR00811 Bacterial general secretion pathway protein D signature 453 463 7.8E-20 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 157 580 1.8E-164 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 526 559 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 Pfam PF03958 Bacterial type II/III secretion system short domain 256 321 9.4E-13 T 22-04-2016 IPR005644 NolW-like VPUCM_RS14370 eb2f2af6b386616289e4e355660690ab 582 Pfam PF00263 Bacterial type II and III secretion system protein 422 580 5.5E-46 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VPUCM_RS09140 a26e42d6784d92ddc27b209d2f16a5d7 144 PANTHER PTHR28026:SF3 1 143 5.4E-35 T 22-04-2016 VPUCM_RS09140 a26e42d6784d92ddc27b209d2f16a5d7 144 PANTHER PTHR28026 1 143 5.4E-35 T 22-04-2016 VPUCM_RS09140 a26e42d6784d92ddc27b209d2f16a5d7 144 Pfam PF06127 Protein of unknown function (DUF962) 1 142 4.3E-20 T 22-04-2016 IPR009305 Protein of unknown function DUF962 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 8.5E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 PANTHER PTHR11985:SF1 3 509 9.3E-191 T 22-04-2016 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 502 5.0E-11 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 PANTHER PTHR11985 3 509 9.3E-191 T 22-04-2016 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 SUPERFAMILY SSF51905 324 385 1.04E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 SUPERFAMILY SSF51905 17 272 1.04E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 Gene3D G3DSA:3.50.50.60 17 316 5.3E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VPUCM_RS04285 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 3.8E-29 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 Gene3D G3DSA:1.10.10.10 2 135 1.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 SMART SM00347 23 124 1.0E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 PANTHER PTHR33164:SF16 10 133 8.3E-22 T 22-04-2016 VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 SUPERFAMILY SSF46785 12 136 3.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 Pfam PF12802 MarR family 30 88 1.4E-12 T 22-04-2016 VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.9E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 2.9E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.9E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.9E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS03450 bbe7e4392c1aea711d7fbb5d2381cca3 137 PANTHER PTHR33164 10 133 8.3E-22 T 22-04-2016 VPUCM_RS00145 8dd2022c7fbbf861daf16c0e3f1e297a 485 Pfam PF02386 Cation transport protein 39 477 4.8E-90 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VPUCM_RS00145 8dd2022c7fbbf861daf16c0e3f1e297a 485 PANTHER PTHR32024:SF2 1 484 2.2E-267 T 22-04-2016 VPUCM_RS00145 8dd2022c7fbbf861daf16c0e3f1e297a 485 PIRSF PIRSF006247 1 485 1.1E-175 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VPUCM_RS00145 8dd2022c7fbbf861daf16c0e3f1e297a 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 9.6E-118 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VPUCM_RS00145 8dd2022c7fbbf861daf16c0e3f1e297a 485 PANTHER PTHR32024 1 484 2.2E-267 T 22-04-2016 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 PANTHER PTHR32119 1 230 8.2E-120 T 22-04-2016 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 SUPERFAMILY SSF51366 1 228 1.01E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 SMART SM00934 5 226 9.9E-102 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 6.9E-54 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 4.1E-58 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 PANTHER PTHR32119:SF2 1 230 8.2E-120 T 22-04-2016 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 Gene3D G3DSA:3.20.20.70 3 229 5.0E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS10430 c19d0a9e413945143e0489f5b7ad62ae 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.442 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VPUCM_RS01535 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01535 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01535 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 8.8E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01535 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 22-04-2016 VPUCM_RS01535 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01535 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01535 756d9a7dbdd6c76983597e7873ac5986 37 PANTHER PTHR18804 1 37 3.4E-18 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14165 e9530ed76ca6a976f127ee9bbcaf2e41 176 PANTHER PTHR10302 1 176 1.3E-55 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VPUCM_RS14165 e9530ed76ca6a976f127ee9bbcaf2e41 176 Gene3D G3DSA:2.40.50.140 4 176 4.6E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14165 e9530ed76ca6a976f127ee9bbcaf2e41 176 Pfam PF00436 Single-strand binding protein family 6 106 5.1E-44 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VPUCM_RS14165 e9530ed76ca6a976f127ee9bbcaf2e41 176 SUPERFAMILY SSF50249 4 176 1.27E-64 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14165 e9530ed76ca6a976f127ee9bbcaf2e41 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 1.8E-63 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VPUCM_RS14165 e9530ed76ca6a976f127ee9bbcaf2e41 176 PIRSF PIRSF002070 2 175 5.0E-38 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VPUCM_RS14165 e9530ed76ca6a976f127ee9bbcaf2e41 176 PANTHER PTHR10302:SF0 1 176 1.3E-55 T 22-04-2016 VPUCM_RS14165 e9530ed76ca6a976f127ee9bbcaf2e41 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.834 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VPUCM_RS09560 0c0c1ec9ecf113b2d9f3d8191aa35ac7 292 PANTHER PTHR36838 1 291 1.2E-108 T 22-04-2016 VPUCM_RS09560 0c0c1ec9ecf113b2d9f3d8191aa35ac7 292 PANTHER PTHR36838:SF2 1 291 1.2E-108 T 22-04-2016 VPUCM_RS09560 0c0c1ec9ecf113b2d9f3d8191aa35ac7 292 Pfam PF03547 Membrane transport protein 150 284 6.9E-7 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 PANTHER PTHR11938:SF96 144 182 1.5E-104 T 22-04-2016 VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 PANTHER PTHR11938:SF96 1 125 1.5E-104 T 22-04-2016 VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 4.8E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 SUPERFAMILY SSF54862 1 183 6.38E-48 T 22-04-2016 VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 PANTHER PTHR11938 144 182 1.5E-104 T 22-04-2016 VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 PANTHER PTHR11938 1 125 1.5E-104 T 22-04-2016 VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 65 120 5.3E-22 T 22-04-2016 VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 3 64 7.9E-21 T 22-04-2016 VPUCM_RS07990 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 121 181 7.9E-21 T 22-04-2016 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 9.6E-44 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 SUPERFAMILY SSF55347 127 236 1.87E-37 T 22-04-2016 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 SUPERFAMILY SSF51735 236 268 2.22E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 SUPERFAMILY SSF51735 1 126 2.22E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 PANTHER PTHR20836:SF0 1 269 2.8E-100 T 22-04-2016 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 Gene3D G3DSA:3.40.50.720 1 163 1.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 2.6E-40 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 3.8E-98 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 PANTHER PTHR20836 1 269 2.8E-100 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 PIRSF PIRSF000161 1 268 9.8E-88 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS02305 c587c6e81b420e5817d889855634b14c 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.37 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Pfam PF00667 FAD binding domain 256 448 1.4E-28 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 623 49.214 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 623 4.5E-257 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PANTHER PTHR19384 86 623 5.1E-208 T 22-04-2016 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Gene3D G3DSA:3.40.50.360 82 232 4.4E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 SUPERFAMILY SSF63380 252 469 4.71E-62 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 1.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 1.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 1.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 1.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 1.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 452 1.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 1.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 1.6E-29 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PIRSF PIRSF000207 20 623 5.5E-281 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PANTHER PTHR19384:SF76 86 623 5.1E-208 T 22-04-2016 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Gene3D G3DSA:1.20.990.10 305 407 7.7E-33 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 SUPERFAMILY SSF52343 468 623 9.17E-51 T 22-04-2016 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Pfam PF00258 Flavodoxin 89 220 5.1E-29 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Gene3D G3DSA:3.40.50.80 479 622 2.0E-61 T 22-04-2016 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00369 Flavodoxin signature 88 101 9.9E-10 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00369 Flavodoxin signature 168 178 9.9E-10 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00369 Flavodoxin signature 136 147 9.9E-10 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 PRINTS PR00369 Flavodoxin signature 192 211 9.9E-10 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 SUPERFAMILY SSF52218 86 233 2.92E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Gene3D G3DSA:2.40.30.10 252 304 2.0E-40 T 22-04-2016 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Gene3D G3DSA:2.40.30.10 408 478 2.0E-40 T 22-04-2016 VPUCM_RS14260 625b72d891b451fd1619b65140d42cf9 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 1.8E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VPUCM_RS12210 31ed7fd77d6e01f7f70db70ca30f1f54 198 PANTHER PTHR38108 2 152 1.8E-19 T 22-04-2016 VPUCM_RS12210 31ed7fd77d6e01f7f70db70ca30f1f54 198 PANTHER PTHR38108:SF1 2 152 1.8E-19 T 22-04-2016 VPUCM_RS12210 31ed7fd77d6e01f7f70db70ca30f1f54 198 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 192 3.7E-33 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VPUCM_RS12210 31ed7fd77d6e01f7f70db70ca30f1f54 198 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 195 25.139 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 SUPERFAMILY SSF46689 382 466 2.28E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 Gene3D G3DSA:1.10.10.60 400 466 3.5E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 6.7E-238 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 SUPERFAMILY SSF52540 141 385 1.18E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 SMART SM00382 162 316 9.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 SUPERFAMILY SSF52172 2 187 3.42E-43 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 Pfam PF00158 Sigma-54 interaction domain 142 308 7.0E-71 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 Gene3D G3DSA:3.40.50.2300 6 131 9.9E-36 T 22-04-2016 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 PANTHER PTHR32071:SF15 6 466 2.1E-240 T 22-04-2016 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 SMART SM00448 4 115 3.1E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 Pfam PF00072 Response regulator receiver domain 6 115 1.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 PANTHER PTHR32071 6 466 2.1E-240 T 22-04-2016 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.6E-16 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 Gene3D G3DSA:1.10.8.60 315 392 1.9E-22 T 22-04-2016 VPUCM_RS00590 c4baca8abee61efc4fd259419672ac0b 467 Gene3D G3DSA:3.40.50.300 139 314 2.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10460 77fed326f9030c6ef81815d71e2fa603 353 Gene3D G3DSA:3.90.226.10 102 209 2.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS10460 77fed326f9030c6ef81815d71e2fa603 353 Gene3D G3DSA:3.90.226.10 275 311 2.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS10460 77fed326f9030c6ef81815d71e2fa603 353 PANTHER PTHR33209 1 353 4.0E-197 T 22-04-2016 VPUCM_RS10460 77fed326f9030c6ef81815d71e2fa603 353 SUPERFAMILY SSF52096 103 213 7.85E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS10460 77fed326f9030c6ef81815d71e2fa603 353 SUPERFAMILY SSF52096 244 303 7.85E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS10460 77fed326f9030c6ef81815d71e2fa603 353 PANTHER PTHR33209:SF2 1 353 4.0E-197 T 22-04-2016 VPUCM_RS10460 77fed326f9030c6ef81815d71e2fa603 353 Pfam PF01343 Peptidase family S49 166 314 2.1E-47 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VPUCM_RS10460 77fed326f9030c6ef81815d71e2fa603 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 1.5E-56 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VPUCM_RS04165 70af0fb1d5dc27d6057d5276f2624797 402 Gene3D G3DSA:3.40.50.2300 91 143 0.001 T 22-04-2016 VPUCM_RS04165 70af0fb1d5dc27d6057d5276f2624797 402 Gene3D G3DSA:3.40.50.300 147 385 1.3E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04165 70af0fb1d5dc27d6057d5276f2624797 402 SUPERFAMILY SSF52540 152 384 9.69E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04165 70af0fb1d5dc27d6057d5276f2624797 402 Pfam PF13614 AAA domain 153 306 5.4E-10 T 22-04-2016 IPR025669 AAA domain VPUCM_RS04165 70af0fb1d5dc27d6057d5276f2624797 402 PANTHER PTHR13696 153 398 9.5E-25 T 22-04-2016 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 3.5E-207 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 PANTHER PTHR22594 6 180 2.2E-249 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 PANTHER PTHR22594 199 465 2.2E-249 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 SUPERFAMILY SSF55681 97 464 3.98E-95 T 22-04-2016 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 SUPERFAMILY SSF50249 15 101 8.78E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 PANTHER PTHR22594:SF6 6 180 2.2E-249 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 PANTHER PTHR22594:SF6 199 465 2.2E-249 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 Gene3D G3DSA:2.40.50.140 15 103 6.4E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.5E-12 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 Gene3D G3DSA:3.30.930.10 109 462 1.8E-112 T 22-04-2016 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.6E-81 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06675 0409801b4b1a37410b0f585f25fc2948 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.922 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VPUCM_RS12605 1f65f83ee6e4fe6dfab1a720650c3b03 760 SUPERFAMILY SSF48452 258 453 2.42E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS12605 1f65f83ee6e4fe6dfab1a720650c3b03 760 SMART SM00028 88 121 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS12605 1f65f83ee6e4fe6dfab1a720650c3b03 760 SMART SM00028 254 287 27.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS12605 1f65f83ee6e4fe6dfab1a720650c3b03 760 SMART SM00028 416 449 420.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS12605 1f65f83ee6e4fe6dfab1a720650c3b03 760 SMART SM00028 334 367 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS12605 1f65f83ee6e4fe6dfab1a720650c3b03 760 SMART SM00028 294 327 0.054 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS12605 1f65f83ee6e4fe6dfab1a720650c3b03 760 SUPERFAMILY SSF48452 83 234 5.9E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS12605 1f65f83ee6e4fe6dfab1a720650c3b03 760 Gene3D G3DSA:1.25.40.10 189 456 4.9E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS19680 6815bdfc5ae3943098d53673ed7e5c22 179 Gene3D G3DSA:3.40.50.300 5 179 2.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS19680 6815bdfc5ae3943098d53673ed7e5c22 179 SUPERFAMILY SSF52540 7 179 2.07E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS19680 6815bdfc5ae3943098d53673ed7e5c22 179 Pfam PF12696 TraM recognition site of TraD and TraG 52 164 2.4E-13 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site VPUCM_RS12585 aeacf76cc294c13f0711566bf49b010a 269 Gene3D G3DSA:3.40.190.10 31 162 8.4E-57 T 22-04-2016 VPUCM_RS12585 aeacf76cc294c13f0711566bf49b010a 269 SUPERFAMILY SSF53850 32 269 3.49E-78 T 22-04-2016 VPUCM_RS12585 aeacf76cc294c13f0711566bf49b010a 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.0E-126 T 22-04-2016 IPR004872 Lipoprotein NlpA family VPUCM_RS12585 aeacf76cc294c13f0711566bf49b010a 269 Pfam PF03180 NLPA lipoprotein 33 269 7.0E-98 T 22-04-2016 IPR004872 Lipoprotein NlpA family VPUCM_RS12585 aeacf76cc294c13f0711566bf49b010a 269 PIRSF PIRSF002854 1 269 6.1E-99 T 22-04-2016 IPR004872 Lipoprotein NlpA family VPUCM_RS12585 aeacf76cc294c13f0711566bf49b010a 269 PANTHER PTHR30429:SF1 3 269 4.0E-140 T 22-04-2016 VPUCM_RS12585 aeacf76cc294c13f0711566bf49b010a 269 PANTHER PTHR30429 3 269 4.0E-140 T 22-04-2016 IPR004872 Lipoprotein NlpA family VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 SUPERFAMILY SSF64383 180 312 1.96E-48 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 180 307 1.5E-45 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 181 316 3.0E-77 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 PANTHER PTHR38685 1 316 4.0E-65 T 22-04-2016 VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 PANTHER PTHR38685:SF1 1 316 4.0E-65 T 22-04-2016 VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 Gene3D G3DSA:3.30.1400.10 179 313 4.8E-57 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 SMART SM00771 178 308 5.1E-72 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 310 24.676 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VPUCM_RS12050 02bf0b78167f873718df3b9c63a82a0a 316 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 308 8.2E-87 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VPUCM_RS13945 7d59f26153b5a2694bdcecc571de25f5 267 SUPERFAMILY SSF52540 6 239 4.96E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13945 7d59f26153b5a2694bdcecc571de25f5 267 Gene3D G3DSA:3.40.50.300 2 240 5.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13945 7d59f26153b5a2694bdcecc571de25f5 267 Pfam PF00005 ABC transporter 23 170 2.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS13945 7d59f26153b5a2694bdcecc571de25f5 267 SMART SM00382 31 228 4.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS13945 7d59f26153b5a2694bdcecc571de25f5 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS13945 7d59f26153b5a2694bdcecc571de25f5 267 PANTHER PTHR24220:SF368 8 263 2.6E-185 T 22-04-2016 VPUCM_RS13945 7d59f26153b5a2694bdcecc571de25f5 267 PANTHER PTHR24220 8 263 2.6E-185 T 22-04-2016 VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 SUPERFAMILY SSF46785 5 114 5.25E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 PANTHER PTHR30126:SF11 5 294 2.2E-90 T 22-04-2016 VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 Gene3D G3DSA:1.10.10.10 5 86 4.5E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 SUPERFAMILY SSF53850 92 296 6.52E-44 T 22-04-2016 VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 PANTHER PTHR30126 5 294 2.2E-90 T 22-04-2016 VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 Pfam PF03466 LysR substrate binding domain 90 294 8.7E-50 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 Gene3D G3DSA:3.40.190.10 177 261 4.7E-16 T 22-04-2016 VPUCM_RS04325 f5b5ebde737d4582d07c652897a5c6d9 308 Gene3D G3DSA:3.40.190.10 92 176 3.7E-15 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 334.029 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 SMART SM00471 447 594 2.1E-10 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 3.2E-35 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 SUPERFAMILY SSF55021 689 761 2.18E-8 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 PANTHER PTHR13734:SF45 97 688 2.3E-146 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 SUPERFAMILY SSF55021 797 860 3.88E-10 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Pfam PF01966 HD domain 452 584 1.3E-12 T 22-04-2016 IPR006674 HD domain VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 SUPERFAMILY SSF81593 187 310 5.02E-9 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 SUPERFAMILY SSF109604 418 585 2.29E-12 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 PIRSF PIRSF006288 7 874 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 SUPERFAMILY SSF81301 35 171 1.15E-19 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Gene3D G3DSA:3.30.70.260 692 751 6.4E-4 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Gene3D G3DSA:3.30.70.260 797 855 1.2E-9 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Gene3D G3DSA:1.10.3210.10 421 610 3.1E-25 T 22-04-2016 IPR006674 HD domain VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 PANTHER PTHR13734 97 688 2.3E-146 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Pfam PF01842 ACT domain 802 849 6.5E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Gene3D G3DSA:3.30.460.10 70 162 2.5E-9 T 22-04-2016 VPUCM_RS04620 48d1fe883eb922da872d6f72cdb668f6 874 Pfam PF01909 Nucleotidyltransferase domain 57 109 2.2E-7 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VPUCM_RS10875 e0ecd7fa9ca829d46474a72f99c8346a 236 PANTHER PTHR30098 1 236 5.8E-78 T 22-04-2016 VPUCM_RS10875 e0ecd7fa9ca829d46474a72f99c8346a 236 SUPERFAMILY SSF55729 5 229 2.12E-87 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10875 e0ecd7fa9ca829d46474a72f99c8346a 236 PANTHER PTHR30098:SF2 1 236 5.8E-78 T 22-04-2016 VPUCM_RS10875 e0ecd7fa9ca829d46474a72f99c8346a 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 216 3.6E-75 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VPUCM_RS10875 e0ecd7fa9ca829d46474a72f99c8346a 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 91.834 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VPUCM_RS10875 e0ecd7fa9ca829d46474a72f99c8346a 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 204 4.6E-69 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VPUCM_RS12660 4135665ad58361fc45e960483aa499ad 253 PANTHER PTHR30433 2 253 1.6E-126 T 22-04-2016 VPUCM_RS12660 4135665ad58361fc45e960483aa499ad 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 7.1E-22 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VPUCM_RS12660 4135665ad58361fc45e960483aa499ad 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site VPUCM_RS12660 4135665ad58361fc45e960483aa499ad 253 PANTHER PTHR30433:SF2 2 253 1.6E-126 T 22-04-2016 IPR022522 Flagellar motor stator, MotA VPUCM_RS10085 1ad130899d9e95e6cce484c51404c76b 310 PANTHER PTHR11061 1 308 2.4E-86 T 22-04-2016 VPUCM_RS10085 1ad130899d9e95e6cce484c51404c76b 310 PANTHER PTHR11061:SF34 1 308 2.4E-86 T 22-04-2016 VPUCM_RS10085 1ad130899d9e95e6cce484c51404c76b 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 6.8E-177 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VPUCM_RS10085 1ad130899d9e95e6cce484c51404c76b 310 Gene3D G3DSA:3.40.50.150 44 309 1.9E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10085 1ad130899d9e95e6cce484c51404c76b 310 SUPERFAMILY SSF53335 9 287 3.84E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS12965 cdc7dce4a3918f23d5bbf83bdd8e6382 309 PANTHER PTHR30606 4 308 2.9E-120 T 22-04-2016 VPUCM_RS12965 cdc7dce4a3918f23d5bbf83bdd8e6382 309 PANTHER PTHR30606:SF5 4 308 2.9E-120 T 22-04-2016 VPUCM_RS12965 cdc7dce4a3918f23d5bbf83bdd8e6382 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 299 9.0E-69 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS12965 cdc7dce4a3918f23d5bbf83bdd8e6382 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 43.362 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VPUCM_RS12965 cdc7dce4a3918f23d5bbf83bdd8e6382 309 PIRSF PIRSF026649 5 306 4.7E-72 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS12965 cdc7dce4a3918f23d5bbf83bdd8e6382 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 308 2.6E-135 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 SMART SM00852 4 171 5.3E-30 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 SUPERFAMILY SSF53218 2 204 4.06E-34 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 PANTHER PTHR13939:SF3 1 289 3.4E-138 T 22-04-2016 VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 Gene3D G3DSA:3.40.980.10 2 201 8.4E-26 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 PANTHER PTHR13939 1 289 3.4E-138 T 22-04-2016 VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 PIRSF PIRSF006728 1 391 3.7E-117 T 22-04-2016 IPR008135 Competence-induced protein CinA VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 SUPERFAMILY SSF142433 252 386 1.96E-8 T 22-04-2016 IPR008136 CinA, C-terminal VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.2E-28 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 403 6.9E-76 T 22-04-2016 IPR008135 Competence-induced protein CinA VPUCM_RS06465 679d2a3854009d302ce62484e564947d 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 103.406 T 22-04-2016 IPR008135 Competence-induced protein CinA VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 SUPERFAMILY SSF63867 512 590 5.23E-23 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 SUPERFAMILY SSF52540 7 169 2.65E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 PIRSF PIRSF036618 1 592 0.0 T 22-04-2016 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 1.2E-48 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 SMART SM00852 366 503 5.9E-40 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.3E-25 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Gene3D G3DSA:2.40.340.10 518 586 6.6E-29 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Gene3D G3DSA:3.40.50.300 6 170 5.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 199 353 4.2E-32 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 SUPERFAMILY SSF53218 363 508 1.44E-43 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Gene3D G3DSA:3.90.105.10 328 348 7.8E-19 T 22-04-2016 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Gene3D G3DSA:3.90.105.10 213 235 7.8E-19 T 22-04-2016 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 1.3E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Gene3D G3DSA:2.170.190.11 236 327 6.7E-27 T 22-04-2016 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 PANTHER PTHR10192 193 588 2.9E-159 T 22-04-2016 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.5E-31 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 SUPERFAMILY SSF63882 192 362 1.83E-47 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 1.0E-43 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VPUCM_RS07910 bcc4568ae674d0dc0d16e5a4c8d85038 592 Gene3D G3DSA:3.40.980.10 349 517 6.0E-64 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PANTHER PTHR19271:SF9 247 418 1.0E-268 T 22-04-2016 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PANTHER PTHR19271:SF9 1 221 1.0E-268 T 22-04-2016 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 8.1E-66 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81342 248 296 1.73E-92 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81342 6 221 1.73E-92 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PIRSF PIRSF038885 1 421 3.0E-152 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 5.1E-41 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Gene3D G3DSA:1.20.810.10 6 416 6.2E-158 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81648 297 412 1.13E-33 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PANTHER PTHR19271 247 418 1.0E-268 T 22-04-2016 VPUCM_RS02175 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PANTHER PTHR19271 1 221 1.0E-268 T 22-04-2016 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.0E-45 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 SMART SM01134 73 234 2.4E-58 T 22-04-2016 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 Gene3D G3DSA:3.40.50.1360 76 217 7.5E-16 T 22-04-2016 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 PANTHER PTHR30363 3 253 1.8E-143 T 22-04-2016 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 SMART SM00420 9 61 7.3E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 PANTHER PTHR30363:SF15 3 253 1.8E-143 T 22-04-2016 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 SUPERFAMILY SSF100950 78 234 2.18E-31 T 22-04-2016 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 Gene3D G3DSA:1.10.10.10 5 51 5.9E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 SUPERFAMILY SSF46785 3 67 5.05E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VPUCM_RS01900 bce064b5a0c35d3b2432f3533ecdfa41 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.9E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 SUPERFAMILY SSF103190 64 175 6.28E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 PANTHER PTHR32089:SF59 1 626 1.1E-171 T 22-04-2016 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 Gene3D G3DSA:3.30.450.20 136 270 2.4E-23 T 22-04-2016 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 SMART SM00304 295 349 9.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 SUPERFAMILY SSF58104 317 626 3.01E-73 T 22-04-2016 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 Gene3D G3DSA:1.10.287.950 379 591 2.7E-56 T 22-04-2016 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF02743 Cache domain 38 258 5.2E-26 T 22-04-2016 IPR033479 Double Cache domain 1 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF00672 HAMP domain 277 345 2.8E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 PANTHER PTHR32089 1 626 1.1E-171 T 22-04-2016 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 SMART SM00283 364 625 5.9E-67 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS14810 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 624 5.2E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS01720 48a22cb7e6eb8c7d94d1447fbf2b8cc1 234 SMART SM00382 24 207 5.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS01720 48a22cb7e6eb8c7d94d1447fbf2b8cc1 234 Pfam PF00005 ABC transporter 18 157 3.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS01720 48a22cb7e6eb8c7d94d1447fbf2b8cc1 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 2.2E-102 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 VPUCM_RS01720 48a22cb7e6eb8c7d94d1447fbf2b8cc1 234 Gene3D G3DSA:3.40.50.300 1 229 5.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01720 48a22cb7e6eb8c7d94d1447fbf2b8cc1 234 SUPERFAMILY SSF52540 1 230 2.48E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01720 48a22cb7e6eb8c7d94d1447fbf2b8cc1 234 PANTHER PTHR24220:SF439 1 233 5.2E-97 T 22-04-2016 VPUCM_RS01720 48a22cb7e6eb8c7d94d1447fbf2b8cc1 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS01720 48a22cb7e6eb8c7d94d1447fbf2b8cc1 234 PANTHER PTHR24220 1 233 5.2E-97 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF11987 Translation-initiation factor 2 689 794 1.1E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF50447 806 902 1.59E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:2.40.30.10 577 668 5.6E-22 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF52156 682 811 8.24E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF50447 578 659 1.93E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:2.40.30.10 806 902 9.1E-40 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF46955 3 50 3.11E-12 T 22-04-2016 IPR009061 Putative DNA-binding domain VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 902 17.648 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF52540 403 569 6.19E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF00009 Elongation factor Tu GTP binding domain 408 564 2.8E-32 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 408 562 7.7E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 PANTHER PTHR23115 757 905 4.0E-212 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 PANTHER PTHR23115 382 732 4.0E-212 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 PANTHER PTHR23115:SF184 757 905 4.0E-212 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 PANTHER PTHR23115:SF184 382 732 4.0E-212 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 ProSitePatterns PS01176 Initiation factor 2 signature. 855 877 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.30.56.50 2 50 6.1E-22 T 22-04-2016 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.40.50.300 401 563 9.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.40.50.10050 704 783 3.3E-26 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 330 379 6.4E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 3.8E-8 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 5.2E-16 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial VPUCM_RS03420 d081880ea17bbe0295850cc9f806e1b0 905 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 322 904 1.8E-285 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 VPUCM_RS00525 7cc0e67f7b6c175d12b9f0b1d10950ff 253 Gene3D G3DSA:3.20.20.140 1 253 4.5E-78 T 22-04-2016 VPUCM_RS00525 7cc0e67f7b6c175d12b9f0b1d10950ff 253 PANTHER PTHR10060 1 252 1.0E-146 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS00525 7cc0e67f7b6c175d12b9f0b1d10950ff 253 Pfam PF01026 TatD related DNase 2 252 6.5E-64 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS00525 7cc0e67f7b6c175d12b9f0b1d10950ff 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 2.0E-70 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VPUCM_RS00525 7cc0e67f7b6c175d12b9f0b1d10950ff 253 PANTHER PTHR10060:SF21 1 252 1.0E-146 T 22-04-2016 VPUCM_RS00525 7cc0e67f7b6c175d12b9f0b1d10950ff 253 SUPERFAMILY SSF51556 1 253 1.92E-80 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPUCM_RS00525 7cc0e67f7b6c175d12b9f0b1d10950ff 253 PIRSF PIRSF005902 1 253 2.0E-70 T 22-04-2016 IPR001130 TatD family GO:0016788 VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 Pfam PF01381 Helix-turn-helix 16 61 2.1E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 PANTHER PTHR33516:SF3 85 207 2.4E-41 T 22-04-2016 VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 SUPERFAMILY SSF47413 4 64 8.16E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 PANTHER PTHR33516 85 207 2.4E-41 T 22-04-2016 VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 Pfam PF00717 Peptidase S24-like 126 200 1.7E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 SMART SM00530 7 61 1.6E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 SUPERFAMILY SSF51306 84 212 3.84E-28 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 Gene3D G3DSA:1.10.260.40 3 67 2.2E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS04030 10695ef731a25030f06a20c4fd5babe4 215 Gene3D G3DSA:2.10.109.10 119 214 4.8E-33 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 PIRSF PIRSF000111 1 865 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.605.10 2 225 9.5E-24 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 SUPERFAMILY SSF56796 452 863 2.49E-114 T 22-04-2016 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 PANTHER PTHR11496 361 866 0.0 T 22-04-2016 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 1.9E-25 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.50.1970 451 642 3.7E-59 T 22-04-2016 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.309.10 226 273 2.7E-27 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.309.10 309 405 2.7E-27 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 PANTHER PTHR11496:SF79 361 866 0.0 T 22-04-2016 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:1.20.1090.10 643 863 1.1E-67 T 22-04-2016 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 SUPERFAMILY SSF53720 5 454 1.7E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS11040 bbf96b81fc3521e656f2baa37947ec99 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 2.0E-111 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 Gene3D G3DSA:1.20.1250.20 23 225 6.2E-52 T 22-04-2016 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 SUPERFAMILY SSF103473 13 451 1.15E-87 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 Pfam PF07690 Major Facilitator Superfamily 34 401 1.2E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 PIRSF PIRSF002808 5 453 6.8E-170 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 PANTHER PTHR11662 1 449 5.4E-240 T 22-04-2016 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 2.8E-150 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 4.0E-235 T 22-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 Gene3D G3DSA:1.20.1250.20 244 451 1.1E-52 T 22-04-2016 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 VPUCM_RS04305 a7e053452e580c5f6ac54f5b17fb3960 456 PANTHER PTHR11662:SF141 1 449 5.4E-240 T 22-04-2016 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 SUPERFAMILY SSF53686 16 366 9.95E-108 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 SUPERFAMILY SSF55021 421 514 5.95E-27 T 22-04-2016 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 PANTHER PTHR10314 1 369 1.3E-205 T 22-04-2016 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 1.4E-84 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 2.6E-252 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 PANTHER PTHR10314:SF30 1 369 1.3E-205 T 22-04-2016 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 1.3E-25 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 4.4E-27 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 SUPERFAMILY SSF55021 338 424 1.3E-27 T 22-04-2016 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 Gene3D G3DSA:3.40.50.1100 82 335 2.1E-82 T 22-04-2016 VPUCM_RS15975 2bc4d2700bd1a83797bb4e5e283a3b08 515 Gene3D G3DSA:3.40.1020.10 341 514 2.6E-55 T 22-04-2016 VPUCM_RS00710 3ba52668f0d1ece52822f3b3b5b333fc 163 PIRSF PIRSF006291 2 162 4.1E-40 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VPUCM_RS00710 3ba52668f0d1ece52822f3b3b5b333fc 163 Gene3D G3DSA:3.30.1360.100 85 163 1.1E-33 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VPUCM_RS00710 3ba52668f0d1ece52822f3b3b5b333fc 163 Pfam PF04612 Type II secretion system (T2SS), protein M 6 162 7.7E-56 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VPUCM_RS00710 3ba52668f0d1ece52822f3b3b5b333fc 163 SUPERFAMILY SSF103054 85 162 2.88E-25 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VPUCM_RS15930 0612d2a068077947239a5e09980172c6 328 Gene3D G3DSA:3.90.1200.10 107 326 3.6E-46 T 22-04-2016 VPUCM_RS15930 0612d2a068077947239a5e09980172c6 328 Gene3D G3DSA:3.30.200.20 37 106 6.1E-5 T 22-04-2016 VPUCM_RS15930 0612d2a068077947239a5e09980172c6 328 PANTHER PTHR39573 2 328 1.9E-178 T 22-04-2016 VPUCM_RS15930 0612d2a068077947239a5e09980172c6 328 Pfam PF01636 Phosphotransferase enzyme family 35 256 1.5E-41 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase VPUCM_RS15930 0612d2a068077947239a5e09980172c6 328 SUPERFAMILY SSF56112 5 328 5.23E-91 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS15930 0612d2a068077947239a5e09980172c6 328 PANTHER PTHR39573:SF1 2 328 1.9E-178 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VPUCM_RS15930 0612d2a068077947239a5e09980172c6 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.798 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.2E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 2.0E-150 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.9E-41 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.9E-41 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.9E-41 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.9E-41 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.9E-41 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 152 271 6.6E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 7 149 1.7E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 272 341 1.7E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 SUPERFAMILY SSF51905 3 337 2.67E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 SUPERFAMILY SSF55424 343 466 1.17E-38 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PANTHER PTHR22912:SF160 1 459 5.3E-268 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PANTHER PTHR22912 1 459 5.3E-268 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PIRSF PIRSF000350 1 468 1.5E-82 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 22-04-2016 VPUCM_RS13000 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.30.390.30 342 460 2.2E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 SUPERFAMILY SSF50465 329 432 1.77E-29 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 Gene3D G3DSA:3.40.50.300 7 232 1.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 Gene3D G3DSA:2.40.30.10 344 434 3.2E-10 T 22-04-2016 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 Gene3D G3DSA:2.40.30.10 241 343 8.1E-23 T 22-04-2016 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 432 1.4E-190 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 Pfam PF03143 Elongation factor Tu C-terminal domain 332 435 6.4E-7 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.1E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.1E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.1E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.1E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.1E-12 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 SUPERFAMILY SSF50447 241 325 1.97E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 209 6.3E-12 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 469 50.054 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 Pfam PF00009 Elongation factor Tu GTP binding domain 24 219 1.0E-45 T 22-04-2016 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 PANTHER PTHR23115 10 51 4.6E-76 T 22-04-2016 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 PANTHER PTHR23115 73 323 4.6E-76 T 22-04-2016 VPUCM_RS01115 f73bba61e6238fab47d30edba28f9cf6 469 SUPERFAMILY SSF52540 17 233 4.53E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06280 22962080cb90c0d4e8bc6516188c6a5d 130 PIRSF PIRSF007010 1 130 7.1E-53 T 22-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VPUCM_RS06280 22962080cb90c0d4e8bc6516188c6a5d 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 6.5E-49 T 22-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4292 4310 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 Pfam PF13519 von Willebrand factor type A domain 3951 4064 7.1E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SUPERFAMILY SSF51120 4211 4374 6.67E-24 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SUPERFAMILY SSF53300 3910 4067 1.03E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SMART SM00736 1365 1457 0.13 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SMART SM00736 2881 2973 0.065 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SMART SM00736 986 1078 0.045 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SMART SM00736 1744 1836 0.05 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SMART SM00736 2123 2215 0.051 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SMART SM00736 2502 2594 0.075 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SMART SM00736 504 596 0.034 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SUPERFAMILY SSF141072 3381 3486 2.88E-7 T 22-04-2016 VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4310 4328 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VPUCM_RS08510 0e25a2965e54eee012948739e3b56c35 4435 SMART SM00327 3948 4121 6.6E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 Gene3D G3DSA:3.30.300.30 497 623 5.9E-24 T 22-04-2016 VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 PANTHER PTHR24095:SF160 1 624 0.0 T 22-04-2016 VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 3.0E-25 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 1.2E-11 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 Gene3D G3DSA:3.40.50.980 68 242 1.5E-37 T 22-04-2016 VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 Gene3D G3DSA:3.40.50.980 243 402 1.7E-27 T 22-04-2016 VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 22-04-2016 IPR020845 AMP-binding, conserved site VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 PANTHER PTHR24095 1 624 0.0 T 22-04-2016 VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 SUPERFAMILY SSF56801 3 617 3.79E-155 T 22-04-2016 VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 Gene3D G3DSA:2.30.38.10 417 495 3.6E-9 T 22-04-2016 VPUCM_RS08565 1ab6e5a9c98681c9943ec2005e522a26 625 Pfam PF00501 AMP-binding enzyme 65 501 3.0E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS01455 f4391e6104c2106448fbc151e389915d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01455 f4391e6104c2106448fbc151e389915d 110 Gene3D G3DSA:3.90.470.10 1 109 4.3E-45 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01455 f4391e6104c2106448fbc151e389915d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.699 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS01455 f4391e6104c2106448fbc151e389915d 110 SUPERFAMILY SSF54843 1 109 9.42E-45 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01455 f4391e6104c2106448fbc151e389915d 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 9.1E-36 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01455 f4391e6104c2106448fbc151e389915d 110 PANTHER PTHR13501 1 109 2.6E-55 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS01455 f4391e6104c2106448fbc151e389915d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-50 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 Gene3D G3DSA:3.40.190.10 91 173 4.4E-8 T 22-04-2016 VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 Gene3D G3DSA:3.40.190.10 174 263 1.6E-21 T 22-04-2016 VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 SUPERFAMILY SSF53850 90 299 8.32E-45 T 22-04-2016 VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 SUPERFAMILY SSF46785 8 90 7.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 Gene3D G3DSA:1.10.10.10 8 89 2.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 PANTHER PTHR30537 1 313 3.3E-182 T 22-04-2016 VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 PANTHER PTHR30537:SF14 1 313 3.3E-182 T 22-04-2016 VPUCM_RS04920 f5cd63d342dc7c64662152e8356250a9 314 Pfam PF03466 LysR substrate binding domain 90 295 9.7E-43 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS00980 cf98fa804cf66ef4d06808c5c6102ff9 346 SUPERFAMILY SSF53756 3 343 5.89E-63 T 22-04-2016 VPUCM_RS00980 cf98fa804cf66ef4d06808c5c6102ff9 346 PANTHER PTHR12526 1 344 9.7E-47 T 22-04-2016 VPUCM_RS00980 cf98fa804cf66ef4d06808c5c6102ff9 346 Pfam PF00534 Glycosyl transferases group 1 168 316 2.3E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS00980 cf98fa804cf66ef4d06808c5c6102ff9 346 Gene3D G3DSA:3.40.50.2000 168 312 3.2E-26 T 22-04-2016 VPUCM_RS03085 397ee7b6c1fffe50733221d5293a2705 431 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 28 321 4.7E-73 T 22-04-2016 IPR014150 Conjugal transfer, TrbL VPUCM_RS03085 397ee7b6c1fffe50733221d5293a2705 431 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 62 267 2.6E-37 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 6.0E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 6.0E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 SUPERFAMILY SSF58104 232 536 2.09E-72 T 22-04-2016 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 SMART SM00304 206 259 3.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 534 2.1E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 PANTHER PTHR32089 20 160 5.9E-103 T 22-04-2016 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 PANTHER PTHR32089 180 537 5.9E-103 T 22-04-2016 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 Pfam PF00672 HAMP domain 188 254 5.7E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 SMART SM00283 274 535 1.7E-72 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS10095 89cdbc1d8ddad1176704a1e8e2857594 537 Gene3D G3DSA:1.10.287.950 289 503 3.7E-54 T 22-04-2016 VPUCM_RS11730 07d3d6384014f10ab18a20d2225f220b 78 Gene3D G3DSA:3.30.110.40 3 72 8.5E-8 T 22-04-2016 IPR001455 TusA-like domain VPUCM_RS11730 07d3d6384014f10ab18a20d2225f220b 78 Pfam PF01206 Sulfurtransferase TusA 3 72 3.4E-9 T 22-04-2016 IPR001455 TusA-like domain VPUCM_RS11730 07d3d6384014f10ab18a20d2225f220b 78 SUPERFAMILY SSF64307 2 69 4.06E-7 T 22-04-2016 IPR001455 TusA-like domain VPUCM_RS01030 d01cf9c9a0d6f7903524c99af77d16d4 383 Gene3D G3DSA:3.40.640.10 19 275 8.4E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS01030 d01cf9c9a0d6f7903524c99af77d16d4 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 30 378 1.9E-77 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VPUCM_RS01030 d01cf9c9a0d6f7903524c99af77d16d4 383 PANTHER PTHR30244:SF16 11 376 5.0E-112 T 22-04-2016 VPUCM_RS01030 d01cf9c9a0d6f7903524c99af77d16d4 383 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 20 376 1.6E-160 T 22-04-2016 IPR026385 Aminotransferase, LLPSF_NHT_00031 family VPUCM_RS01030 d01cf9c9a0d6f7903524c99af77d16d4 383 PIRSF PIRSF000390 15 382 1.4E-81 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VPUCM_RS01030 d01cf9c9a0d6f7903524c99af77d16d4 383 Gene3D G3DSA:3.90.1150.10 280 378 9.5E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS01030 d01cf9c9a0d6f7903524c99af77d16d4 383 PANTHER PTHR30244 11 376 5.0E-112 T 22-04-2016 VPUCM_RS01030 d01cf9c9a0d6f7903524c99af77d16d4 383 SUPERFAMILY SSF53383 17 378 2.77E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS08910 4968f62e13972e08bf66789663f70978 326 SUPERFAMILY SSF111369 43 126 5.36E-9 T 22-04-2016 VPUCM_RS08910 4968f62e13972e08bf66789663f70978 326 Pfam PF13437 HlyD family secretion protein 208 312 5.9E-6 T 22-04-2016 VPUCM_RS08910 4968f62e13972e08bf66789663f70978 326 PANTHER PTHR30438 9 326 6.7E-121 T 22-04-2016 VPUCM_RS08910 4968f62e13972e08bf66789663f70978 326 PANTHER PTHR30438:SF1 9 326 6.7E-121 T 22-04-2016 VPUCM_RS08910 4968f62e13972e08bf66789663f70978 326 Gene3D G3DSA:2.40.50.100 205 238 3.6E-13 T 22-04-2016 VPUCM_RS08910 4968f62e13972e08bf66789663f70978 326 Gene3D G3DSA:2.40.50.100 44 78 3.6E-13 T 22-04-2016 VPUCM_RS08910 4968f62e13972e08bf66789663f70978 326 Pfam PF13533 Biotin-lipoyl like 47 91 2.5E-12 T 22-04-2016 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 Gene3D G3DSA:3.40.50.2300 4 131 1.8E-29 T 22-04-2016 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 SUPERFAMILY SSF52172 4 173 7.55E-27 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 PANTHER PTHR26402:SF474 5 204 6.2E-95 T 22-04-2016 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 3.6E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 Pfam PF00072 Response regulator receiver domain 7 120 6.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 PANTHER PTHR26402 5 204 6.2E-95 T 22-04-2016 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 SMART SM00448 5 119 4.9E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 SMART SM00421 147 204 5.0E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 Gene3D G3DSA:1.10.10.10 142 206 5.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS15000 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS12165 da8461a8599cad61e1e0ddb10063f9bc 105 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 1.0E-17 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VPUCM_RS12165 da8461a8599cad61e1e0ddb10063f9bc 105 SUPERFAMILY SSF101498 2 98 2.48E-21 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VPUCM_RS12165 da8461a8599cad61e1e0ddb10063f9bc 105 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 98 1.3E-23 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VPUCM_RS06645 977a3dc30f156d0a33faa936bc56e3d6 213 Gene3D G3DSA:2.40.160.20 32 176 1.7E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS06645 977a3dc30f156d0a33faa936bc56e3d6 213 Pfam PF13505 Outer membrane protein beta-barrel domain 11 175 8.5E-13 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VPUCM_RS06645 977a3dc30f156d0a33faa936bc56e3d6 213 SUPERFAMILY SSF56925 32 176 7.32E-18 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS11355 4873e4eb32ee3daca5435a0f3d33135e 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 1.0E-72 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 SUPERFAMILY SSF53335 10 367 2.33E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 45.216 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 PANTHER PTHR11061 10 368 4.0E-227 T 22-04-2016 VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 Gene3D G3DSA:3.40.50.150 154 367 4.4E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 PANTHER PTHR11061:SF25 10 368 4.0E-227 T 22-04-2016 VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 4.4E-189 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VPUCM_RS15355 cbd8759373c58a478b09a74eb66eabcd 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 5.5E-190 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 Gene3D G3DSA:3.20.20.450 400 638 2.2E-40 T 22-04-2016 IPR001633 EAL domain VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 SUPERFAMILY SSF55073 233 386 5.57E-19 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 382 4.4E-10 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 7.3E-28 T 22-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 Pfam PF00563 EAL domain 406 637 8.1E-53 T 22-04-2016 IPR001633 EAL domain VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 PANTHER PTHR33121 365 637 4.3E-23 T 22-04-2016 VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 SMART SM00267 216 386 5.3E-10 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 Gene3D G3DSA:3.30.70.270 230 388 4.5E-21 T 22-04-2016 VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 PANTHER PTHR33121:SF10 365 637 4.3E-23 T 22-04-2016 VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 4.8E-20 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 SMART SM00052 397 651 1.1E-17 T 22-04-2016 IPR001633 EAL domain VPUCM_RS14160 d1a2b749b3997f9e6ee05097d9c7eb0f 669 SUPERFAMILY SSF141868 406 638 7.32E-38 T 22-04-2016 IPR001633 EAL domain VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 PANTHER PTHR11575 1 651 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 1.1E-23 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 PANTHER PTHR11575:SF6 1 651 0.0 T 22-04-2016 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 PRINTS PR01607 Apyrase family signature 221 238 4.5E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 PRINTS PR01607 Apyrase family signature 289 309 4.5E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 PRINTS PR01607 Apyrase family signature 28 46 4.5E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 PRINTS PR01607 Apyrase family signature 249 272 4.5E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 PRINTS PR01607 Apyrase family signature 536 555 4.5E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 PRINTS PR01607 Apyrase family signature 434 457 4.5E-29 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 SUPERFAMILY SSF56300 23 360 3.37E-87 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 Gene3D G3DSA:3.90.780.10 366 602 2.6E-40 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 2.5E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 SUPERFAMILY SSF55816 361 603 6.54E-36 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS01595 b555598d73c29bb3ec1cce981804370c 653 Gene3D G3DSA:3.60.21.10 19 365 3.6E-96 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 Pfam PF01938 TRAM domain 17 68 6.0E-8 T 22-04-2016 IPR002792 TRAM domain VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 6.2E-130 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 2.6E-36 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 Gene3D G3DSA:2.40.50.140 8 88 7.4E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 SUPERFAMILY SSF53335 77 438 5.63E-86 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 SUPERFAMILY SSF50249 18 74 3.43E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 Gene3D G3DSA:3.40.50.150 259 437 5.2E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 PANTHER PTHR11061 6 438 6.8E-135 T 22-04-2016 VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 64.013 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VPUCM_RS13290 284fddbc7e5fb10c55d37d9ff6c8913e 439 PANTHER PTHR11061:SF30 6 438 6.8E-135 T 22-04-2016 VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 SUPERFAMILY SSF52540 153 406 3.86E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 Gene3D G3DSA:1.25.40.10 622 716 4.7E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 Gene3D G3DSA:3.40.50.300 161 309 1.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 Pfam PF00931 NB-ARC domain 175 309 3.7E-8 T 22-04-2016 IPR002182 NB-ARC GO:0043531 VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 SUPERFAMILY SSF48452 705 730 4.61E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 SUPERFAMILY SSF48452 538 670 4.61E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 Gene3D G3DSA:1.25.40.10 542 621 3.9E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 SMART SM00028 634 667 2.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 SMART SM00028 532 566 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS05395 0271aed381a32d1c91b63ed90b8ce735 880 SMART SM00028 600 633 66.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS04070 ecafe8d879760385435c3706ff944825 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.375 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VPUCM_RS04070 ecafe8d879760385435c3706ff944825 239 PANTHER PTHR21234:SF8 3 234 2.6E-82 T 22-04-2016 VPUCM_RS04070 ecafe8d879760385435c3706ff944825 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VPUCM_RS04070 ecafe8d879760385435c3706ff944825 239 SUPERFAMILY SSF53167 3 234 3.01E-92 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS04070 ecafe8d879760385435c3706ff944825 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.9E-118 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VPUCM_RS04070 ecafe8d879760385435c3706ff944825 239 Gene3D G3DSA:3.40.50.1580 10 233 5.7E-81 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS04070 ecafe8d879760385435c3706ff944825 239 PANTHER PTHR21234 3 234 2.6E-82 T 22-04-2016 IPR018017 Nucleoside phosphorylase VPUCM_RS04070 ecafe8d879760385435c3706ff944825 239 Pfam PF01048 Phosphorylase superfamily 15 217 2.0E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.20.5.110 190 231 1.4E-15 T 22-04-2016 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.20.120.350 30 142 6.1E-16 T 22-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 PANTHER PTHR11537 28 268 1.9E-20 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 PANTHER PTHR11537:SF14 28 268 1.9E-20 T 22-04-2016 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 198 224 8.2E-6 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 107 133 8.2E-6 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 169 191 8.2E-6 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.10.287.70 143 188 7.4E-16 T 22-04-2016 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 Pfam PF00520 Ion transport protein 62 226 7.9E-15 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VPUCM_RS02085 4803098475b090c0d40b3dbcd8ce64ca 272 SUPERFAMILY SSF81324 26 225 2.57E-45 T 22-04-2016 VPUCM_RS24070 7268e69076077b52dea2948fd68b870e 241 PANTHER PTHR30354:SF2 1 241 7.0E-125 T 22-04-2016 VPUCM_RS24070 7268e69076077b52dea2948fd68b870e 241 PANTHER PTHR30354 1 241 7.0E-125 T 22-04-2016 VPUCM_RS24070 7268e69076077b52dea2948fd68b870e 241 Pfam PF02447 GntP family permease 18 240 2.4E-56 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 Gene3D G3DSA:1.10.1020.10 60 156 4.1E-34 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 PANTHER PTHR30481 2 268 5.5E-120 T 22-04-2016 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 SUPERFAMILY SSF53335 5 268 7.75E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 Gene3D G3DSA:3.40.50.150 1 59 1.6E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 Gene3D G3DSA:3.40.50.150 160 267 1.6E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 PANTHER PTHR30481:SF3 2 268 5.5E-120 T 22-04-2016 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 PIRSF PIRSF000398 1 274 1.2E-72 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.3E-67 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS14350 f92c003404acb4556b6d2f5a704dd554 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 2.5E-94 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 Gene3D G3DSA:1.10.10.10 15 144 8.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 8.5E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 8.5E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 8.5E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 8.5E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 SMART SM00347 34 134 4.3E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 PANTHER PTHR33164 22 144 2.5E-15 T 22-04-2016 VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 Pfam PF01047 MarR family 46 97 4.7E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS05915 2f00eb2b8885f6b60ee7c62df5d2a4ed 150 SUPERFAMILY SSF46785 9 145 2.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09390 bef53aed4c2a1153268bdb6c1473309b 324 PANTHER PTHR13812 1 315 1.5E-75 T 22-04-2016 VPUCM_RS09390 bef53aed4c2a1153268bdb6c1473309b 324 PANTHER PTHR13812:SF19 1 315 1.5E-75 T 22-04-2016 VPUCM_RS09390 bef53aed4c2a1153268bdb6c1473309b 324 PIRSF PIRSF001439 1 322 7.6E-65 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin VPUCM_RS09390 bef53aed4c2a1153268bdb6c1473309b 324 Gene3D G3DSA:3.30.1780.10 1 132 4.5E-36 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal VPUCM_RS09390 bef53aed4c2a1153268bdb6c1473309b 324 SUPERFAMILY SSF51735 1 315 4.16E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09390 bef53aed4c2a1153268bdb6c1473309b 324 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 314 1.5E-53 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin VPUCM_RS09390 bef53aed4c2a1153268bdb6c1473309b 324 Gene3D G3DSA:3.40.50.720 133 302 1.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 SUPERFAMILY SSF142695 205 367 1.1E-48 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.75 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 PANTHER PTHR21327:SF6 7 367 4.3E-157 T 22-04-2016 VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.3E-85 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 PIRSF PIRSF001259 3 369 1.2E-130 T 22-04-2016 VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 Gene3D G3DSA:3.90.870.10 2 211 7.1E-102 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 PANTHER PTHR21327 7 367 4.3E-157 T 22-04-2016 VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 3.8E-76 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 SUPERFAMILY SSF55821 3 202 1.9E-87 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VPUCM_RS12700 239951ab22624541ac25f959443ab008 369 Pfam PF00925 GTP cyclohydrolase II 207 367 5.2E-42 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VPUCM_RS13790 b93be475697784dfb96c538d66fe2a7f 159 PANTHER PTHR36115 1 157 2.2E-56 T 22-04-2016 VPUCM_RS13790 b93be475697784dfb96c538d66fe2a7f 159 Pfam PF06271 RDD family 9 149 4.6E-22 T 22-04-2016 IPR010432 RDD VPUCM_RS13790 b93be475697784dfb96c538d66fe2a7f 159 PANTHER PTHR36115:SF2 1 157 2.2E-56 T 22-04-2016 VPUCM_RS14560 c7e0146ae2c109d4fedcc04e331b56ba 197 Gene3D G3DSA:3.40.50.360 10 186 4.5E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS14560 c7e0146ae2c109d4fedcc04e331b56ba 197 SUPERFAMILY SSF52218 10 184 1.37E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS14560 c7e0146ae2c109d4fedcc04e331b56ba 197 PANTHER PTHR10204 9 189 3.7E-73 T 22-04-2016 VPUCM_RS14560 c7e0146ae2c109d4fedcc04e331b56ba 197 PANTHER PTHR10204:SF42 9 189 3.7E-73 T 22-04-2016 VPUCM_RS14560 c7e0146ae2c109d4fedcc04e331b56ba 197 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 191 49.725 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VPUCM_RS14560 c7e0146ae2c109d4fedcc04e331b56ba 197 Pfam PF02525 Flavodoxin-like fold 10 176 9.9E-42 T 22-04-2016 IPR003680 Flavodoxin-like fold VPUCM_RS15185 6f5bfd0ff8b648ba1f7d049fd29395ff 190 SMART SM00986 27 183 7.1E-31 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VPUCM_RS15185 6f5bfd0ff8b648ba1f7d049fd29395ff 190 Gene3D G3DSA:3.40.470.10 2 189 1.1E-47 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VPUCM_RS15185 6f5bfd0ff8b648ba1f7d049fd29395ff 190 PANTHER PTHR42160 1 190 6.4E-92 T 22-04-2016 VPUCM_RS15185 6f5bfd0ff8b648ba1f7d049fd29395ff 190 PANTHER PTHR42160:SF1 1 190 6.4E-92 T 22-04-2016 VPUCM_RS15185 6f5bfd0ff8b648ba1f7d049fd29395ff 190 SUPERFAMILY SSF52141 2 189 6.54E-59 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VPUCM_RS15185 6f5bfd0ff8b648ba1f7d049fd29395ff 190 SMART SM00987 27 183 7.1E-31 T 22-04-2016 VPUCM_RS15185 6f5bfd0ff8b648ba1f7d049fd29395ff 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 1.1E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 SUPERFAMILY SSF51246 299 369 2.83E-19 T 22-04-2016 IPR011054 Rudiment single hybrid motif VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 SUPERFAMILY SSF52440 1 88 1.73E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 Pfam PF02222 ATP-grasp domain 101 274 1.8E-51 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 PANTHER PTHR11609:SF5 3 355 1.2E-114 T 22-04-2016 VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 Gene3D G3DSA:3.30.470.20 177 360 1.5E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 SUPERFAMILY SSF56059 92 295 1.73E-56 T 22-04-2016 VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 PANTHER PTHR11609 3 355 1.2E-114 T 22-04-2016 VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 Gene3D G3DSA:3.40.50.20 1 82 6.0E-21 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 Gene3D G3DSA:3.30.1490.20 107 165 1.1E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.967 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VPUCM_RS15855 61d8f051f687da88f8f4396c0f1c2dac 375 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 2.2E-104 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Gene3D G3DSA:3.10.430.100 61 148 5.3E-28 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 SUPERFAMILY SSF55658 1 57 2.27E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 SUPERFAMILY SSF55653 60 148 1.05E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.5E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 1.0E-55 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.19 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Gene3D G3DSA:3.40.5.10 1 52 3.3E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 PANTHER PTHR21368 1 148 4.9E-53 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14325 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.4E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 SUPERFAMILY SSF51735 173 420 5.12E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 365 2.3E-25 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 PANTHER PTHR23406 44 425 1.5E-164 T 22-04-2016 VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 SUPERFAMILY SSF53223 20 171 2.45E-52 T 22-04-2016 VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 Pfam PF00390 Malic enzyme, N-terminal domain 31 160 7.2E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 Gene3D G3DSA:3.40.50.10380 16 170 1.6E-49 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 PIRSF PIRSF000106 49 425 2.3E-72 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 SMART SM01274 28 161 6.0E-75 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 Gene3D G3DSA:3.40.50.720 171 422 9.7E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14470 824cf05326eb4126af8b8f4fbb294164 425 SMART SM00919 173 409 1.0E-142 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 VPUCM_RS09905 8d966259b50b7d0a79450b3bc49976d1 492 Gene3D G3DSA:3.40.50.720 1 223 3.7E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09905 8d966259b50b7d0a79450b3bc49976d1 492 SUPERFAMILY SSF51735 1 295 2.39E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09905 8d966259b50b7d0a79450b3bc49976d1 492 Pfam PF11066 Protein of unknown function (DUF2867) 333 466 9.1E-14 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 VPUCM_RS09905 8d966259b50b7d0a79450b3bc49976d1 492 Pfam PF13460 NAD(P)H-binding 8 150 4.2E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09905 8d966259b50b7d0a79450b3bc49976d1 492 PANTHER PTHR10366 260 319 3.9E-104 T 22-04-2016 VPUCM_RS09905 8d966259b50b7d0a79450b3bc49976d1 492 PANTHER PTHR10366 3 239 3.9E-104 T 22-04-2016 VPUCM_RS09905 8d966259b50b7d0a79450b3bc49976d1 492 PANTHER PTHR10366:SF401 260 319 3.9E-104 T 22-04-2016 VPUCM_RS09905 8d966259b50b7d0a79450b3bc49976d1 492 PANTHER PTHR10366:SF401 3 239 3.9E-104 T 22-04-2016 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 Gene3D G3DSA:3.40.605.10 18 263 2.7E-88 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 SUPERFAMILY SSF53720 15 474 1.44E-153 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 Pfam PF00171 Aldehyde dehydrogenase family 22 470 9.0E-159 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 PIRSF PIRSF036492 7 474 1.5E-83 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 PANTHER PTHR11699:SF49 24 473 3.8E-235 T 22-04-2016 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 Gene3D G3DSA:3.40.309.10 264 446 1.7E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS13655 303f307a71406b04a7c4472db4c4547b 477 PANTHER PTHR11699 24 473 3.8E-235 T 22-04-2016 VPUCM_RS06745 cc4a4b776e07868805b01cff85444a6f 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 66 339 6.8E-75 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 VPUCM_RS06745 cc4a4b776e07868805b01cff85444a6f 346 PANTHER PTHR39342:SF1 1 345 3.6E-78 T 22-04-2016 VPUCM_RS06745 cc4a4b776e07868805b01cff85444a6f 346 PANTHER PTHR39342 1 345 3.6E-78 T 22-04-2016 VPUCM_RS06745 cc4a4b776e07868805b01cff85444a6f 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 34.003 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 VPUCM_RS06745 cc4a4b776e07868805b01cff85444a6f 346 Pfam PF05128 Domain of unknown function (DUF697) 181 339 2.3E-49 T 22-04-2016 IPR021147 Protein of unknown function DUF697 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Gene3D G3DSA:1.10.1040.10 499 593 4.9E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.174 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Gene3D G3DSA:3.90.226.10 235 296 1.0E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Gene3D G3DSA:3.90.226.10 4 201 1.0E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 PANTHER PTHR23309 8 719 0.0 T 22-04-2016 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 SUPERFAMILY SSF51735 315 496 1.01E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 PANTHER PTHR23309:SF18 8 719 0.0 T 22-04-2016 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Gene3D G3DSA:1.10.1040.10 633 715 2.8E-19 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 SUPERFAMILY SSF48179 496 605 2.72E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 209 1.1E-38 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 SUPERFAMILY SSF52096 2 304 5.67E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 2.4E-26 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 710 8.6E-6 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Gene3D G3DSA:3.40.50.720 305 498 1.6E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 2.6E-57 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS00135 e7c20dae291de24c6958a1b201ec3789 723 SUPERFAMILY SSF48179 625 715 1.02E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS04940 2913d89daa35cdbb823f1310e990f9e5 563 Pfam PF13395 HNH endonuclease 454 492 6.2E-5 T 22-04-2016 IPR003615 HNH nuclease VPUCM_RS04940 2913d89daa35cdbb823f1310e990f9e5 563 SUPERFAMILY SSF53335 7 168 1.86E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS04940 2913d89daa35cdbb823f1310e990f9e5 563 PANTHER PTHR10108 36 141 1.8E-13 T 22-04-2016 VPUCM_RS04940 2913d89daa35cdbb823f1310e990f9e5 563 PANTHER PTHR10108 1 20 1.8E-13 T 22-04-2016 VPUCM_RS04940 2913d89daa35cdbb823f1310e990f9e5 563 Pfam PF13489 Methyltransferase domain 35 167 3.3E-11 T 22-04-2016 VPUCM_RS04940 2913d89daa35cdbb823f1310e990f9e5 563 Gene3D G3DSA:3.40.50.150 20 175 7.1E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751:SF406 482 490 7.6E-251 T 22-04-2016 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751:SF406 510 630 7.6E-251 T 22-04-2016 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751:SF406 131 459 7.6E-251 T 22-04-2016 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 3.2E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 SUPERFAMILY SSF53383 130 562 3.02E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.40.640.10 130 423 3.8E-100 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 SUPERFAMILY SSF55904 568 708 4.45E-43 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 PIRSF PIRSF009393 1 711 7.3E-289 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.6E-189 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.90.100.10 588 709 8.5E-38 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.90.1150.10 425 587 1.7E-66 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751 482 490 7.6E-251 T 22-04-2016 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751 510 630 7.6E-251 T 22-04-2016 VPUCM_RS15130 43a38a507f79df15ee5237d69e115783 711 PANTHER PTHR11751 131 459 7.6E-251 T 22-04-2016 VPUCM_RS01630 9d5f46e66ac0341a85d64b9f16615713 164 Pfam PF11736 Protein of unknown function (DUF3299) 28 161 6.1E-45 T 22-04-2016 IPR021727 Protein of unknown function DUF3299 VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 PIRSF PIRSF001217 8 616 1.2E-227 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 2.3E-52 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 Gene3D G3DSA:3.90.226.10 29 174 4.4E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 Gene3D G3DSA:3.90.226.10 468 552 4.7E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 Gene3D G3DSA:3.90.226.10 217 313 4.4E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 Gene3D G3DSA:3.90.226.10 323 431 4.7E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 SUPERFAMILY SSF52096 315 439 6.78E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 Pfam PF01343 Peptidase family S49 138 294 1.5E-30 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 Pfam PF01343 Peptidase family S49 391 541 2.1E-46 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 PANTHER PTHR33209:SF1 1 614 2.6E-218 T 22-04-2016 VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 SUPERFAMILY SSF52096 209 284 4.55E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 SUPERFAMILY SSF52096 53 178 4.55E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 SUPERFAMILY SSF52096 467 529 6.78E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 PANTHER PTHR33209 1 614 2.6E-218 T 22-04-2016 VPUCM_RS11125 9abeffc2f53afed216372ae11f495e26 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 4.1E-193 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VPUCM_RS01215 b0182420453ba9992037dd9bc5d8eea1 261 Pfam PF01061 ABC-2 type transporter 17 222 2.5E-19 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 VPUCM_RS01215 b0182420453ba9992037dd9bc5d8eea1 261 PIRSF PIRSF006648 1 258 3.7E-14 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS01215 b0182420453ba9992037dd9bc5d8eea1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 1.5E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS01215 b0182420453ba9992037dd9bc5d8eea1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 35 56 1.5E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS01215 b0182420453ba9992037dd9bc5d8eea1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 200 219 1.5E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS01215 b0182420453ba9992037dd9bc5d8eea1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 66 88 1.5E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS01215 b0182420453ba9992037dd9bc5d8eea1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 143 167 1.5E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS01215 b0182420453ba9992037dd9bc5d8eea1 261 PANTHER PTHR30413 10 261 9.2E-16 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 SUPERFAMILY SSF51395 452 1221 1.58E-268 T 22-04-2016 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 Pfam PF00310 Glutamine amidotransferases class-II 21 443 1.2E-184 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 Gene3D G3DSA:2.160.20.60 1241 1510 2.3E-108 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 Gene3D G3DSA:3.20.20.70 454 806 2.9E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 Gene3D G3DSA:3.20.20.70 831 1223 7.2E-179 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 Gene3D G3DSA:3.60.20.10 21 453 8.0E-183 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 PANTHER PTHR11938:SF1 10 1502 0.0 T 22-04-2016 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 PANTHER PTHR11938 10 1502 0.0 T 22-04-2016 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 SUPERFAMILY SSF56235 21 447 7.72E-153 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 SUPERFAMILY SSF69336 1235 1498 6.93E-96 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 Pfam PF01645 Conserved region in glutamate synthase 817 1187 1.1E-150 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 Pfam PF04898 Glutamate synthase central domain 472 756 2.1E-117 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VPUCM_RS02390 3d981a981d16e8e868bf66323159cd31 1517 Pfam PF01493 GXGXG motif 1267 1452 2.7E-84 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 PANTHER PTHR13789 2 399 2.0E-166 T 22-04-2016 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 Gene3D G3DSA:3.50.50.60 279 316 2.7E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 Gene3D G3DSA:3.50.50.60 1 167 2.7E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 Gene3D G3DSA:3.30.9.10 168 274 1.4E-4 T 22-04-2016 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 Gene3D G3DSA:3.30.9.10 332 360 1.4E-4 T 22-04-2016 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 PANTHER PTHR13789:SF5 2 399 2.0E-166 T 22-04-2016 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.9E-18 T 22-04-2016 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.9E-18 T 22-04-2016 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.9E-18 T 22-04-2016 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.9E-18 T 22-04-2016 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 2.3E-138 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 SUPERFAMILY SSF51905 268 385 1.22E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 SUPERFAMILY SSF51905 5 177 1.22E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 Pfam PF01494 FAD binding domain 5 347 1.3E-27 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VPUCM_RS13380 acd72be72afcb0ee6d876418ced77447 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VPUCM_RS05375 3c7f77dbaf2b3920ca1fb3928bce43e4 698 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 441 572 2.2E-9 T 22-04-2016 IPR013398 CRISPR-associated protein Csy2 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 SUPERFAMILY SSF54292 242 350 1.15E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 Pfam PF00970 Oxidoreductase FAD-binding domain 18 108 1.4E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 PANTHER PTHR19370:SF89 10 271 2.4E-65 T 22-04-2016 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 SUPERFAMILY SSF63380 4 110 1.42E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 Gene3D G3DSA:3.10.20.30 249 349 9.8E-26 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 PANTHER PTHR19370 10 271 2.4E-65 T 22-04-2016 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 Gene3D G3DSA:3.40.50.80 119 248 2.3E-31 T 22-04-2016 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 1.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 1.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 SUPERFAMILY SSF52343 118 253 2.36E-31 T 22-04-2016 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 275 341 1.9E-11 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 Pfam PF00175 Oxidoreductase NAD-binding domain 126 233 8.6E-13 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VPUCM_RS10080 874bfaaa9559ff4affef6f7f2d5f9408 351 Gene3D G3DSA:2.40.30.10 4 107 1.1E-24 T 22-04-2016 VPUCM_RS00955 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00955 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00955 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VPUCM_RS00955 e4bb6030cdb6c1393052a1629f342086 56 PANTHER PTHR15238 1 56 1.4E-24 T 22-04-2016 VPUCM_RS00955 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00955 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 Gene3D G3DSA:3.40.140.10 184 287 8.3E-24 T 22-04-2016 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 142 4.8E-12 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 6.1E-42 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 PIRSF PIRSF006334 14 295 7.1E-110 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 SUPERFAMILY SSF53927 152 287 2.8E-38 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 SUPERFAMILY SSF53927 1 146 1.02E-40 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 PANTHER PTHR11644 19 295 7.5E-131 T 22-04-2016 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.888 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 Gene3D G3DSA:3.40.140.10 32 176 1.0E-43 T 22-04-2016 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 292 4.5E-99 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VPUCM_RS09535 9e0b41c1130d1e81eaefe6745f43b528 295 PANTHER PTHR11644:SF15 19 295 7.5E-131 T 22-04-2016 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 Pfam PF02743 Cache domain 40 258 8.7E-34 T 22-04-2016 IPR033479 Double Cache domain 1 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 Pfam PF00672 HAMP domain 278 346 6.1E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 SUPERFAMILY SSF58104 318 627 9.02E-77 T 22-04-2016 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 SMART SM00304 296 350 3.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 SMART SM00304 353 403 4.3 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 PANTHER PTHR32089:SF59 1 627 1.2E-284 T 22-04-2016 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 Gene3D G3DSA:1.10.287.950 380 597 3.8E-57 T 22-04-2016 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 Gene3D G3DSA:3.30.450.20 63 168 1.3E-30 T 22-04-2016 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 PANTHER PTHR32089 1 627 1.2E-284 T 22-04-2016 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 625 1.0E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 SUPERFAMILY SSF103190 89 175 2.62E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VPUCM_RS06630 8e905871a82e5c20211b17f3d1156c9b 627 SMART SM00283 365 626 7.1E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 3.0E-255 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF54849 137 203 1.19E-23 T 22-04-2016 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.644 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:3.50.7.10 200 369 2.0E-94 T 22-04-2016 IPR027409 GroEL-like apical domain VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:1.10.560.10 370 518 2.0E-39 T 22-04-2016 IPR027413 GroEL-like equatorial domain VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF52029 185 376 8.37E-84 T 22-04-2016 IPR027409 GroEL-like apical domain VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.5E-97 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:1.10.560.10 3 199 6.1E-50 T 22-04-2016 IPR027413 GroEL-like equatorial domain VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 PANTHER PTHR11353 2 547 4.5E-256 T 22-04-2016 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF48592 406 521 3.89E-77 T 22-04-2016 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF48592 7 134 3.89E-77 T 22-04-2016 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VPUCM_RS14930 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 Gene3D G3DSA:1.10.860.10 20 122 2.6E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF48024 18 129 4.58E-37 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 Gene3D G3DSA:3.40.50.300 194 457 6.3E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 5.7E-175 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 4.4E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 1.7E-115 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 PANTHER PTHR30153 4 465 4.2E-224 T 22-04-2016 VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF52540 197 268 7.42E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14315 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF52540 295 449 7.42E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05385 3a88c13ad5cf8d320d731993a85e2161 200 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 6 196 4.0E-26 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 VPUCM_RS05385 3a88c13ad5cf8d320d731993a85e2161 200 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 5 196 8.1E-25 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 VPUCM_RS09740 9444ac178e83e3a2386e34738980e55f 244 Pfam PF02698 DUF218 domain 61 200 9.4E-22 T 22-04-2016 IPR003848 Domain of unknown function DUF218 VPUCM_RS09740 9444ac178e83e3a2386e34738980e55f 244 Gene3D G3DSA:3.40.50.620 54 181 1.4E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS09740 9444ac178e83e3a2386e34738980e55f 244 PANTHER PTHR30336 16 220 2.7E-87 T 22-04-2016 VPUCM_RS09740 9444ac178e83e3a2386e34738980e55f 244 PANTHER PTHR30336:SF0 16 220 2.7E-87 T 22-04-2016 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 SUPERFAMILY SSF47323 316 459 2.09E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 PANTHER PTHR10890 1 459 2.2E-254 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 Pfam PF09190 DALR domain 341 402 6.4E-25 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 2.5E-191 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 Gene3D G3DSA:1.20.120.640 306 392 1.7E-27 T 22-04-2016 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 7.3E-141 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 Gene3D G3DSA:3.40.50.620 20 305 2.4E-112 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 SMART SM00840 341 402 1.4E-28 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.294 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VPUCM_RS06180 cf9e6df6dddbd8279549d4d990226ec2 460 SUPERFAMILY SSF52374 1 313 2.25E-103 T 22-04-2016 VPUCM_RS10620 a8fc74d3c4f4f9cc10162f43925313dd 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 3.4E-68 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VPUCM_RS10620 a8fc74d3c4f4f9cc10162f43925313dd 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 7.7E-58 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VPUCM_RS10620 a8fc74d3c4f4f9cc10162f43925313dd 201 SUPERFAMILY SSF52540 12 201 4.56E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10620 a8fc74d3c4f4f9cc10162f43925313dd 201 Gene3D G3DSA:3.40.50.300 7 201 7.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10620 a8fc74d3c4f4f9cc10162f43925313dd 201 PIRSF PIRSF015617 6 201 2.5E-65 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VPUCM_RS10620 a8fc74d3c4f4f9cc10162f43925313dd 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.3E-7 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VPUCM_RS10620 a8fc74d3c4f4f9cc10162f43925313dd 201 PANTHER PTHR30069 1 201 3.4E-65 T 22-04-2016 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 SUPERFAMILY SSF51735 1 146 1.71E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 PANTHER PTHR10174 200 367 2.7E-152 T 22-04-2016 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 PANTHER PTHR10174 102 178 2.7E-152 T 22-04-2016 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 3.2E-57 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 Gene3D G3DSA:3.40.50.720 1 141 1.9E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 119 1.1E-21 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 SMART SM00859 2 121 3.8E-21 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 PIRSF PIRSF000148 1 371 7.0E-65 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 PANTHER PTHR10174:SF116 200 367 2.7E-152 T 22-04-2016 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 PANTHER PTHR10174:SF116 102 178 2.7E-152 T 22-04-2016 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 Gene3D G3DSA:3.30.360.10 142 350 4.4E-76 T 22-04-2016 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.845 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 SUPERFAMILY SSF55347 133 354 2.43E-78 T 22-04-2016 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 9.6E-189 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS11055 83e3ad9d0042cfa17620b2ea88f19d92 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 Gene3D G3DSA:3.40.190.10 178 256 1.4E-10 T 22-04-2016 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 3.6E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 PANTHER PTHR30537 1 307 7.7E-83 T 22-04-2016 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 PANTHER PTHR30537:SF26 1 307 7.7E-83 T 22-04-2016 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 SUPERFAMILY SSF46785 4 87 1.08E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 SUPERFAMILY SSF53850 95 292 9.77E-36 T 22-04-2016 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 Gene3D G3DSA:3.40.190.10 95 177 1.9E-28 T 22-04-2016 VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 Gene3D G3DSA:1.10.10.10 5 84 4.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04100 1efcd7f4f0c3e7e66282e34708bf1358 308 Pfam PF03466 LysR substrate binding domain 94 289 2.1E-29 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS05535 1daeecf015ea74373340e4bdcd73fd21 59 Pfam PF03966 Trm112p-like protein 2 41 2.7E-11 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 VPUCM_RS05535 1daeecf015ea74373340e4bdcd73fd21 59 SUPERFAMILY SSF158997 1 54 1.05E-20 T 22-04-2016 VPUCM_RS05535 1daeecf015ea74373340e4bdcd73fd21 59 Gene3D G3DSA:2.20.25.10 8 57 1.3E-25 T 22-04-2016 VPUCM_RS05535 1daeecf015ea74373340e4bdcd73fd21 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.799 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 VPUCM_RS05535 1daeecf015ea74373340e4bdcd73fd21 59 PANTHER PTHR33505 1 57 4.8E-26 T 22-04-2016 VPUCM_RS14045 8cfb4f548305685546416ae17612da96 273 PANTHER PTHR23088 3 272 1.3E-104 T 22-04-2016 VPUCM_RS14045 8cfb4f548305685546416ae17612da96 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 7.2E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS14045 8cfb4f548305685546416ae17612da96 273 PANTHER PTHR23088:SF27 3 272 1.3E-104 T 22-04-2016 VPUCM_RS14045 8cfb4f548305685546416ae17612da96 273 SUPERFAMILY SSF56317 3 263 8.76E-80 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS14045 8cfb4f548305685546416ae17612da96 273 Gene3D G3DSA:3.60.110.10 3 266 2.8E-82 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS14045 8cfb4f548305685546416ae17612da96 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site VPUCM_RS10475 a0e930ea090fdd04a67b0f66809aa77a 467 PANTHER PTHR35369:SF2 1 467 3.3E-57 T 22-04-2016 VPUCM_RS10475 a0e930ea090fdd04a67b0f66809aa77a 467 PANTHER PTHR35369 1 467 3.3E-57 T 22-04-2016 VPUCM_RS10475 a0e930ea090fdd04a67b0f66809aa77a 467 SUPERFAMILY SSF56672 11 225 1.78E-33 T 22-04-2016 VPUCM_RS10475 a0e930ea090fdd04a67b0f66809aa77a 467 Pfam PF00817 impB/mucB/samB family 23 146 1.1E-9 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS15445 f9c6a561672ee2879f13e1d026d281d4 88 PANTHER PTHR38775:SF1 2 88 7.7E-27 T 22-04-2016 VPUCM_RS15445 f9c6a561672ee2879f13e1d026d281d4 88 PANTHER PTHR38775 2 88 7.7E-27 T 22-04-2016 VPUCM_RS15445 f9c6a561672ee2879f13e1d026d281d4 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 9.0E-19 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 PANTHER PTHR18964:SF128 61 286 4.6E-191 T 22-04-2016 VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 PANTHER PTHR18964:SF128 304 401 4.6E-191 T 22-04-2016 VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 PANTHER PTHR18964 61 286 4.6E-191 T 22-04-2016 VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 PANTHER PTHR18964 304 401 4.6E-191 T 22-04-2016 VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 Pfam PF00480 ROK family 86 390 1.9E-76 T 22-04-2016 IPR000600 ROK family VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:3.30.420.40 83 221 1.9E-35 T 22-04-2016 VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:1.10.10.10 11 78 4.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 22-04-2016 IPR000600 ROK family VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 SUPERFAMILY SSF46785 11 75 6.18E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:3.30.420.40 222 374 4.7E-47 T 22-04-2016 VPUCM_RS11885 d35787e7b14bd4f46dd0418a543fe4fe 404 SUPERFAMILY SSF53067 85 391 1.94E-56 T 22-04-2016 VPUCM_RS24140 4e3a71f4724cbd88c505390e4613a8bb 165 SUPERFAMILY SSF51161 61 159 5.68E-33 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS24140 4e3a71f4724cbd88c505390e4613a8bb 165 Gene3D G3DSA:2.160.10.10 62 162 2.9E-27 T 22-04-2016 VPUCM_RS24140 4e3a71f4724cbd88c505390e4613a8bb 165 PANTHER PTHR23416 68 163 1.6E-26 T 22-04-2016 VPUCM_RS24140 4e3a71f4724cbd88c505390e4613a8bb 165 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 135 4.9E-8 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS24140 4e3a71f4724cbd88c505390e4613a8bb 165 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 94 0.001 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS13210 e56fab375e1e721503c58069f9eac722 155 Pfam PF02631 RecX family 34 150 9.8E-31 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VPUCM_RS13210 e56fab375e1e721503c58069f9eac722 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.898 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VPUCM_RS13210 e56fab375e1e721503c58069f9eac722 155 PANTHER PTHR33602 13 155 1.9E-37 T 22-04-2016 VPUCM_RS13210 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 58 100 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13210 e56fab375e1e721503c58069f9eac722 155 PANTHER PTHR33602:SF1 13 155 1.9E-37 T 22-04-2016 VPUCM_RS13210 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 104 155 2.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13210 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 13 57 3.4E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 PANTHER PTHR19211:SF45 1 575 5.1E-246 T 22-04-2016 VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 Pfam PF00005 ABC transporter 336 469 1.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 Pfam PF00005 ABC transporter 19 185 2.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 PANTHER PTHR19211 1 575 5.1E-246 T 22-04-2016 VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 SUPERFAMILY SSF52540 310 518 9.77E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 SUPERFAMILY SSF52540 4 233 1.05E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 SMART SM00382 344 514 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 SMART SM00382 28 230 6.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 Pfam PF12848 ABC transporter 224 297 7.5E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 Gene3D G3DSA:3.40.50.300 2 271 1.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 Pfam PF16326 ABC transporter C-terminal domain 565 634 6.1E-22 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 Gene3D G3DSA:3.40.50.300 321 561 7.7E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS08335 6d6354d6fc58565aebe80011b196a411 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS06455 6e6b32134379d4d2535b45b5972477d3 170 Gene3D G3DSA:3.30.70.260 84 168 4.7E-16 T 22-04-2016 VPUCM_RS06455 6e6b32134379d4d2535b45b5972477d3 170 Pfam PF13740 ACT domain 5 67 2.0E-10 T 22-04-2016 VPUCM_RS06455 6e6b32134379d4d2535b45b5972477d3 170 PIRSF PIRSF028103 1 169 3.6E-43 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VPUCM_RS06455 6e6b32134379d4d2535b45b5972477d3 170 Gene3D G3DSA:3.30.70.260 4 68 2.2E-6 T 22-04-2016 VPUCM_RS06455 6e6b32134379d4d2535b45b5972477d3 170 PANTHER PTHR34875 1 169 1.7E-27 T 22-04-2016 VPUCM_RS06455 6e6b32134379d4d2535b45b5972477d3 170 SUPERFAMILY SSF55021 90 167 1.25E-9 T 22-04-2016 VPUCM_RS09485 33eb478c4ac815441c5f36df9943a42a 598 SUPERFAMILY SSF55486 4 576 3.18E-96 T 22-04-2016 VPUCM_RS09485 33eb478c4ac815441c5f36df9943a42a 598 Gene3D G3DSA:3.40.390.10 379 421 8.1E-4 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VPUCM_RS09485 33eb478c4ac815441c5f36df9943a42a 598 PANTHER PTHR11804 1 593 3.1E-90 T 22-04-2016 VPUCM_RS09485 33eb478c4ac815441c5f36df9943a42a 598 Pfam PF01432 Peptidase family M3 337 580 4.4E-22 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VPUCM_RS09485 33eb478c4ac815441c5f36df9943a42a 598 PANTHER PTHR11804:SF46 1 593 3.1E-90 T 22-04-2016 VPUCM_RS09485 33eb478c4ac815441c5f36df9943a42a 598 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 1.4E-202 T 22-04-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VPUCM_RS09485 33eb478c4ac815441c5f36df9943a42a 598 Pfam PF08439 Oligopeptidase F 106 174 1.9E-12 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 SUPERFAMILY SSF158832 3 321 4.32E-121 T 22-04-2016 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Gene3D G3DSA:1.10.10.650 1 109 2.9E-48 T 22-04-2016 IPR023319 Tex-like protein, HTH domain VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 SUPERFAMILY SSF47781 560 632 3.78E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Pfam PF00575 S1 RNA binding domain 649 720 7.2E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Gene3D G3DSA:1.10.150.310 499 630 2.2E-45 T 22-04-2016 IPR023097 Tex RuvX-like domain VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 8.7E-56 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 PANTHER PTHR10724:SF1 1 747 0.0 T 22-04-2016 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Gene3D G3DSA:2.40.50.140 633 720 2.3E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Gene3D G3DSA:3.30.420.140 327 450 1.2E-52 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 PANTHER PTHR10724 1 747 0.0 T 22-04-2016 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 SMART SM00316 649 720 1.2E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Pfam PF09371 Tex-like protein N-terminal domain 9 192 5.5E-72 T 22-04-2016 IPR018974 Tex-like protein, N-terminal VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Gene3D G3DSA:1.10.3500.10 451 498 7.4E-102 T 22-04-2016 IPR023323 Tex-like domain VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Gene3D G3DSA:1.10.3500.10 110 322 7.4E-102 T 22-04-2016 IPR023323 Tex-like domain VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 3.0E-27 T 22-04-2016 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 SUPERFAMILY SSF53098 322 469 5.92E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 SUPERFAMILY SSF50249 638 723 4.1E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 SUPERFAMILY SSF47781 470 557 1.45E-26 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VPUCM_RS00750 02fb6e92094f2341ba247d2939322aa9 773 SMART SM00732 326 424 2.5E-38 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 PANTHER PTHR10108:SF864 13 259 3.2E-183 T 22-04-2016 VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 258 3.3E-103 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 SUPERFAMILY SSF53335 27 257 4.18E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 7.7E-83 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 Gene3D G3DSA:3.40.50.150 32 255 4.4E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.455 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 PANTHER PTHR10108 13 259 3.2E-183 T 22-04-2016 VPUCM_RS00495 6f893c82d99df8de1eb984497c1bac53 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VPUCM_RS06415 9152568fd65d5297958657e51fc8e9f4 185 PANTHER PTHR14269:SF13 2 179 7.2E-92 T 22-04-2016 VPUCM_RS06415 9152568fd65d5297958657e51fc8e9f4 185 PANTHER PTHR14269 2 179 7.2E-92 T 22-04-2016 VPUCM_RS06415 9152568fd65d5297958657e51fc8e9f4 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.8E-18 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VPUCM_RS06415 9152568fd65d5297958657e51fc8e9f4 185 PIRSF PIRSF000847 1 184 3.3E-46 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VPUCM_RS06415 9152568fd65d5297958657e51fc8e9f4 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VPUCM_RS06415 9152568fd65d5297958657e51fc8e9f4 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 8.6E-55 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 PANTHER PTHR30408:SF4 162 506 2.2E-103 T 22-04-2016 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 SUPERFAMILY SSF53335 74 525 1.4E-123 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 SUPERFAMILY SSF53335 4 43 1.4E-123 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 Pfam PF12161 HsdM N-terminal domain 6 150 3.4E-15 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 Gene3D G3DSA:3.40.50.150 187 431 1.5E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 4 486 1.3E-103 T 22-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 PANTHER PTHR30408 162 506 2.2E-103 T 22-04-2016 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 213 227 4.3E-19 T 22-04-2016 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 201 4.3E-19 T 22-04-2016 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 333 357 4.3E-19 T 22-04-2016 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 4.3E-19 T 22-04-2016 VPUCM_RS03630 018463dc7eb9d6af67f9766ad5a14da2 875 Pfam PF02384 N-6 DNA Methylase 162 478 5.0E-98 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VPUCM_RS13875 ea5912135cd2b7c6d42918d40b014d0e 545 Pfam PF00589 Phage integrase family 293 500 3.5E-6 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS13875 ea5912135cd2b7c6d42918d40b014d0e 545 Gene3D G3DSA:1.10.443.10 293 502 1.7E-16 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS13875 ea5912135cd2b7c6d42918d40b014d0e 545 SUPERFAMILY SSF56349 297 373 2.21E-12 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS13875 ea5912135cd2b7c6d42918d40b014d0e 545 SUPERFAMILY SSF56349 412 502 2.21E-12 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 PANTHER PTHR32282 1 940 0.0 T 22-04-2016 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:1.10.8.280 285 405 1.2E-44 T 22-04-2016 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:3.40.50.300 2 51 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:3.40.50.300 477 596 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:3.40.50.300 605 671 4.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:3.40.50.300 820 938 4.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.965 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 PANTHER PTHR32282:SF2 1 940 0.0 T 22-04-2016 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 SUPERFAMILY SSF52540 429 568 1.81E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 SUPERFAMILY SSF52540 4 204 1.81E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:1.20.1580.10 250 283 3.0E-54 T 22-04-2016 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:1.20.1580.10 91 129 3.0E-54 T 22-04-2016 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:1.20.1580.10 406 476 3.0E-54 T 22-04-2016 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:1.20.1580.10 693 819 6.0E-55 T 22-04-2016 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Pfam PF00005 ABC transporter 622 859 5.3E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:3.30.1490.20 200 248 1.5E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 Gene3D G3DSA:3.30.1490.20 130 153 1.5E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS14180 ed453c1231354c7278c839b74048da6e 940 SUPERFAMILY SSF52540 620 912 4.28E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 Pfam PF04542 Sigma-70 region 2 34 99 3.7E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 2.5E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 SUPERFAMILY SSF88946 8 118 3.14E-26 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 Gene3D G3DSA:1.10.10.10 127 189 2.8E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 Pfam PF04545 Sigma-70, region 4 139 187 2.0E-13 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 PANTHER PTHR30173 3 192 8.5E-61 T 22-04-2016 VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 PANTHER PTHR30173:SF31 3 192 8.5E-61 T 22-04-2016 VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 SUPERFAMILY SSF88659 127 189 1.35E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS04435 3d8326e167c6de9e3e26006fff319c5a 194 Gene3D G3DSA:1.10.1740.10 9 118 1.6E-25 T 22-04-2016 VPUCM_RS09030 eab3d20e3192ac91405327211febc366 121 Gene3D G3DSA:3.10.180.10 2 118 5.4E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS09030 eab3d20e3192ac91405327211febc366 121 PIRSF PIRSF039020 1 121 1.4E-43 T 22-04-2016 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase VPUCM_RS09030 eab3d20e3192ac91405327211febc366 121 SUPERFAMILY SSF54593 4 118 5.92E-16 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 SMART SM00419 170 218 5.4E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 Gene3D G3DSA:1.10.10.10 149 219 1.5E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 SUPERFAMILY SSF51206 1 142 5.11E-27 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 Pfam PF00027 Cyclic nucleotide-binding domain 32 119 1.3E-14 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 SUPERFAMILY SSF46785 149 225 5.97E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 2.4E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 2.4E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 SMART SM00100 13 131 1.2E-11 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 Pfam PF13545 Crp-like helix-turn-helix domain 151 225 3.2E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 Gene3D G3DSA:2.60.120.10 10 143 4.1E-25 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS06325 e7e462071f9e7b585e16244d309a09d9 230 PANTHER PTHR24567 1 225 1.2E-38 T 22-04-2016 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 PANTHER PTHR35038 38 319 1.9E-57 T 22-04-2016 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 Gene3D G3DSA:1.10.3820.10 178 311 3.6E-18 T 22-04-2016 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 Gene3D G3DSA:1.10.710.10 51 177 3.2E-16 T 22-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 PANTHER PTHR35038:SF3 38 319 1.9E-57 T 22-04-2016 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 59 319 3.8E-100 T 22-04-2016 IPR020015 Decaheme cytochrome, c-type, DmsE VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 251 286 2.9E-11 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 211 243 5.6E-7 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 204 244 7.4E-11 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 251 286 9.3E-12 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 161 193 2.8E-5 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 90 147 3.9E-7 T 22-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 VPUCM_RS09925 f87b61d830ea4ac308a8abddd5ea4ff1 326 SUPERFAMILY SSF48695 61 310 6.34E-50 T 22-04-2016 IPR011031 Multihaem cytochrome VPUCM_RS12185 e10fb707463cc5a6da64a854fa606338 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 2.1E-27 T 22-04-2016 IPR032388 Flagellar assembly protein T, C-terminal VPUCM_RS12185 e10fb707463cc5a6da64a854fa606338 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 2.3E-26 T 22-04-2016 IPR032370 Flagellar assembly protein T, N-terminal VPUCM_RS12185 e10fb707463cc5a6da64a854fa606338 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 1.7E-41 T 22-04-2016 IPR032386 Flagellar assembly protein T, middle domain VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 SUPERFAMILY SSF54523 7 98 5.73E-10 T 22-04-2016 VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 Gene3D G3DSA:3.55.40.10 39 190 3.0E-46 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.7E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 2.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 166 9.5E-13 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 142 157 7.0E-21 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 7.0E-21 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 7.0E-21 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00685 e905f2c67162ec8c2090ba120c58ac7f 198 Pfam PF12019 Type II transport protein GspH 42 179 2.2E-8 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VPUCM_RS01935 37fa9021a67ae6b2931873f9ee9b2be8 211 SMART SM01120 32 206 2.1E-78 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 VPUCM_RS01935 37fa9021a67ae6b2931873f9ee9b2be8 211 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.4E-78 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- VPUCM_RS01935 37fa9021a67ae6b2931873f9ee9b2be8 211 Pfam PF02734 DAK2 domain 33 205 2.7E-54 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 VPUCM_RS01935 37fa9021a67ae6b2931873f9ee9b2be8 211 PANTHER PTHR28629 1 210 8.5E-75 T 22-04-2016 VPUCM_RS01935 37fa9021a67ae6b2931873f9ee9b2be8 211 SUPERFAMILY SSF101473 2 207 7.72E-58 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 VPUCM_RS10560 dae02ea0c2d3fe185e3522afe4186eaa 77 PANTHER PTHR20863 4 75 4.1E-31 T 22-04-2016 VPUCM_RS10560 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VPUCM_RS10560 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site VPUCM_RS10560 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.1E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS10560 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VPUCM_RS10560 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS10560 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 3 75 3.5E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS02515 1dddd0fd1ae147e4902e344963c6b41a 579 SUPERFAMILY SSF64182 45 464 7.19E-119 T 22-04-2016 VPUCM_RS02515 1dddd0fd1ae147e4902e344963c6b41a 579 Pfam PF01368 DHH family 71 205 4.0E-11 T 22-04-2016 IPR001667 DDH domain VPUCM_RS02515 1dddd0fd1ae147e4902e344963c6b41a 579 PANTHER PTHR30255:SF2 1 578 5.7E-225 T 22-04-2016 VPUCM_RS02515 1dddd0fd1ae147e4902e344963c6b41a 579 PANTHER PTHR30255 1 578 5.7E-225 T 22-04-2016 VPUCM_RS02515 1dddd0fd1ae147e4902e344963c6b41a 579 Pfam PF02272 DHHA1 domain 380 449 2.0E-16 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VPUCM_RS02515 1dddd0fd1ae147e4902e344963c6b41a 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 7.8E-158 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VPUCM_RS03395 4bd780200a55e5b462cb8b5279accbf0 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.0E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VPUCM_RS03395 4bd780200a55e5b462cb8b5279accbf0 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.0E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VPUCM_RS03395 4bd780200a55e5b462cb8b5279accbf0 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.0E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VPUCM_RS03395 4bd780200a55e5b462cb8b5279accbf0 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.0E-44 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VPUCM_RS03395 4bd780200a55e5b462cb8b5279accbf0 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 5.5E-22 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VPUCM_RS03395 4bd780200a55e5b462cb8b5279accbf0 112 PANTHER PTHR34182 2 90 2.6E-27 T 22-04-2016 VPUCM_RS03395 4bd780200a55e5b462cb8b5279accbf0 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.6E-25 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 PANTHER PTHR10982 1 306 4.4E-168 T 22-04-2016 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 SUPERFAMILY SSF55048 128 197 9.16E-19 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 Gene3D G3DSA:3.40.366.10 2 122 5.9E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 Gene3D G3DSA:3.40.366.10 197 302 5.9E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 PIRSF PIRSF000446 1 307 5.1E-137 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 Gene3D G3DSA:3.30.70.250 125 196 2.3E-32 T 22-04-2016 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 Pfam PF00698 Acyl transferase domain 7 291 2.7E-39 T 22-04-2016 IPR014043 Acyl transferase VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.0E-127 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 SUPERFAMILY SSF52151 190 305 1.02E-82 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 SUPERFAMILY SSF52151 4 122 1.02E-82 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VPUCM_RS10570 95587b55f69179f04e04139a31e68f1b 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 4.0E-45 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 2.9E-23 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 5.1E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 5.1E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 Gene3D G3DSA:1.10.760.10 245 322 2.4E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 PANTHER PTHR33751:SF1 115 324 2.7E-111 T 22-04-2016 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 PANTHER PTHR33751:SF1 25 79 2.7E-111 T 22-04-2016 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 Gene3D G3DSA:1.10.760.10 60 82 1.8E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 Gene3D G3DSA:1.10.760.10 149 244 1.8E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 PIRSF PIRSF000006 1 322 2.3E-111 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 PANTHER PTHR33751 115 324 2.7E-111 T 22-04-2016 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 PANTHER PTHR33751 25 79 2.7E-111 T 22-04-2016 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 112 321 4.9E-60 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 240 315 1.6E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 8.4E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 SUPERFAMILY SSF46626 239 321 2.76E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 SUPERFAMILY SSF46626 55 78 8.31E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08165 6b5adba03efb5f6e515fb1c73480d047 324 SUPERFAMILY SSF46626 145 238 8.31E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 SMART SM00448 4 114 2.7E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.7E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 Gene3D G3DSA:3.40.50.2300 2 130 3.1E-36 T 22-04-2016 VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 SUPERFAMILY SSF46894 137 233 9.92E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 Pfam PF00072 Response regulator receiver domain 6 113 3.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 PANTHER PTHR26402:SF586 4 238 6.4E-151 T 22-04-2016 VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 SUPERFAMILY SSF52172 2 130 2.99E-36 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 Gene3D G3DSA:1.10.10.10 134 233 7.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 PANTHER PTHR26402 4 238 6.4E-151 T 22-04-2016 VPUCM_RS02415 4cefa865e6c099572c70b8abc4900b99 238 SMART SM00862 156 232 2.4E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS14660 f75c8a646672b3e0c3b605dcb95cb898 211 SUPERFAMILY SSF81901 64 178 3.92E-22 T 22-04-2016 VPUCM_RS14660 f75c8a646672b3e0c3b605dcb95cb898 211 Pfam PF08238 Sel1 repeat 74 106 0.011 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS14660 f75c8a646672b3e0c3b605dcb95cb898 211 Pfam PF08238 Sel1 repeat 109 143 1.3E-4 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS14660 f75c8a646672b3e0c3b605dcb95cb898 211 SMART SM00671 144 179 22.0 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS14660 f75c8a646672b3e0c3b605dcb95cb898 211 SMART SM00671 108 143 3.2E-5 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS14660 f75c8a646672b3e0c3b605dcb95cb898 211 SMART SM00671 72 107 0.0025 T 22-04-2016 IPR006597 Sel1-like repeat VPUCM_RS14660 f75c8a646672b3e0c3b605dcb95cb898 211 PANTHER PTHR11102 61 175 7.2E-16 T 22-04-2016 VPUCM_RS14660 f75c8a646672b3e0c3b605dcb95cb898 211 Gene3D G3DSA:1.25.40.10 64 178 3.7E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS10670 07a516a1bae52713f3b5955e40101879 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS10670 07a516a1bae52713f3b5955e40101879 322 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 53.029 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VPUCM_RS10670 07a516a1bae52713f3b5955e40101879 322 PANTHER PTHR11082:SF26 1 317 4.7E-185 T 22-04-2016 VPUCM_RS10670 07a516a1bae52713f3b5955e40101879 322 PANTHER PTHR11082 1 317 4.7E-185 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS10670 07a516a1bae52713f3b5955e40101879 322 Gene3D G3DSA:3.20.20.70 2 240 4.1E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS10670 07a516a1bae52713f3b5955e40101879 322 Pfam PF01207 Dihydrouridine synthase (Dus) 5 296 3.7E-78 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS10670 07a516a1bae52713f3b5955e40101879 322 PIRSF PIRSF006621 1 322 7.3E-76 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS10670 07a516a1bae52713f3b5955e40101879 322 SUPERFAMILY SSF51395 1 313 2.01E-73 T 22-04-2016 VPUCM_RS10610 d7c85ddf9c4cd54a1f15c501d414487d 519 PANTHER PTHR11814 4 503 2.2E-174 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VPUCM_RS10610 d7c85ddf9c4cd54a1f15c501d414487d 519 SUPERFAMILY SSF52091 416 498 2.35E-11 T 22-04-2016 IPR002645 STAS domain VPUCM_RS10610 d7c85ddf9c4cd54a1f15c501d414487d 519 Gene3D G3DSA:3.30.750.24 417 506 3.3E-9 T 22-04-2016 IPR002645 STAS domain VPUCM_RS10610 d7c85ddf9c4cd54a1f15c501d414487d 519 PANTHER PTHR11814:SF71 4 503 2.2E-174 T 22-04-2016 VPUCM_RS10610 d7c85ddf9c4cd54a1f15c501d414487d 519 Pfam PF01740 STAS domain 417 503 2.5E-6 T 22-04-2016 IPR002645 STAS domain VPUCM_RS10610 d7c85ddf9c4cd54a1f15c501d414487d 519 Pfam PF00916 Sulfate permease family 13 374 1.2E-57 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VPUCM_RS01890 cc161af64d0a1a3b5c83c7465a37e73a 208 SUPERFAMILY SSF46785 2 60 2.75E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01890 cc161af64d0a1a3b5c83c7465a37e73a 208 Gene3D G3DSA:1.10.10.10 2 58 7.0E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01890 cc161af64d0a1a3b5c83c7465a37e73a 208 Pfam PF07729 FCD domain 66 193 2.7E-7 T 22-04-2016 IPR011711 GntR, C-terminal VPUCM_RS01890 cc161af64d0a1a3b5c83c7465a37e73a 208 SUPERFAMILY SSF48008 63 201 3.66E-7 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS01890 cc161af64d0a1a3b5c83c7465a37e73a 208 SMART SM00345 1 56 9.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS01890 cc161af64d0a1a3b5c83c7465a37e73a 208 Gene3D G3DSA:1.20.120.530 62 205 1.4E-13 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS01890 cc161af64d0a1a3b5c83c7465a37e73a 208 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 56 2.4E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 PANTHER PTHR31817 75 107 1.8E-47 T 22-04-2016 VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 PANTHER PTHR31817 130 357 1.8E-47 T 22-04-2016 VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 PANTHER PTHR31817 8 59 1.8E-47 T 22-04-2016 VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 Pfam PF08014 Domain of unknown function (DUF1704) 42 378 4.3E-119 T 22-04-2016 IPR012548 Protein of unknown function DUF1704 VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 16 373 5.4E-135 T 22-04-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 PANTHER PTHR31817:SF4 75 107 1.8E-47 T 22-04-2016 VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 PANTHER PTHR31817:SF4 130 357 1.8E-47 T 22-04-2016 VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 PANTHER PTHR31817:SF4 8 59 1.8E-47 T 22-04-2016 VPUCM_RS02580 6379b2b38c7da554d276b78652d82694 380 SMART SM01154 41 380 3.1E-160 T 22-04-2016 IPR012548 Protein of unknown function DUF1704 VPUCM_RS10580 5882315ef4a9debd925eff32abe7b35d 341 Gene3D G3DSA:3.40.718.10 3 335 1.5E-127 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VPUCM_RS10580 5882315ef4a9debd925eff32abe7b35d 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.1E-101 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 VPUCM_RS10580 5882315ef4a9debd925eff32abe7b35d 341 PANTHER PTHR30100:SF1 2 341 9.0E-133 T 22-04-2016 VPUCM_RS10580 5882315ef4a9debd925eff32abe7b35d 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 137.986 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VPUCM_RS10580 5882315ef4a9debd925eff32abe7b35d 341 PANTHER PTHR30100 2 341 9.0E-133 T 22-04-2016 VPUCM_RS10580 5882315ef4a9debd925eff32abe7b35d 341 PIRSF PIRSF002465 2 339 1.3E-124 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VPUCM_RS10580 5882315ef4a9debd925eff32abe7b35d 341 SUPERFAMILY SSF53659 4 336 1.07E-102 T 22-04-2016 VPUCM_RS10580 5882315ef4a9debd925eff32abe7b35d 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 7.9E-107 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 SUPERFAMILY SSF51445 260 620 5.48E-129 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 SUPERFAMILY SSF55545 125 259 5.83E-25 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PANTHER PTHR22600:SF21 79 320 1.4E-193 T 22-04-2016 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PANTHER PTHR22600:SF21 336 638 1.4E-193 T 22-04-2016 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 7.5E-14 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PANTHER PTHR22600 79 320 1.4E-193 T 22-04-2016 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PANTHER PTHR22600 336 638 1.4E-193 T 22-04-2016 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 Gene3D G3DSA:3.20.20.80 258 637 6.4E-136 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 7.7E-50 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 Gene3D G3DSA:3.30.379.10 136 256 6.6E-17 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VPUCM_RS12865 46250d91f89b5e1b3e8d56e0ba10ca7b 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 7.4E-120 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VPUCM_RS01520 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.5E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VPUCM_RS01520 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VPUCM_RS01520 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS01520 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS01520 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 4.5E-33 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VPUCM_RS01520 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.0E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS01520 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site VPUCM_RS01520 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PANTHER PTHR15892 1 58 2.5E-30 T 22-04-2016 VPUCM_RS18155 bfd8e033a4c0566e3e2494b96c6b27af 181 PANTHER PTHR11101:SF63 1 181 5.8E-95 T 22-04-2016 VPUCM_RS18155 bfd8e033a4c0566e3e2494b96c6b27af 181 Pfam PF01384 Phosphate transporter family 2 181 4.8E-37 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VPUCM_RS18155 bfd8e033a4c0566e3e2494b96c6b27af 181 PANTHER PTHR11101 1 181 5.8E-95 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VPUCM_RS07645 ed3f5ac3804734195da5365d4410bb10 302 SUPERFAMILY SSF53067 1 299 1.8E-57 T 22-04-2016 VPUCM_RS07645 ed3f5ac3804734195da5365d4410bb10 302 Pfam PF00480 ROK family 2 300 8.4E-74 T 22-04-2016 IPR000600 ROK family VPUCM_RS07645 ed3f5ac3804734195da5365d4410bb10 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family VPUCM_RS07645 ed3f5ac3804734195da5365d4410bb10 302 PANTHER PTHR18964 1 301 9.6E-149 T 22-04-2016 VPUCM_RS07645 ed3f5ac3804734195da5365d4410bb10 302 Gene3D G3DSA:3.30.420.40 1 132 1.3E-38 T 22-04-2016 VPUCM_RS07645 ed3f5ac3804734195da5365d4410bb10 302 Gene3D G3DSA:3.30.420.40 133 280 5.6E-43 T 22-04-2016 VPUCM_RS07645 ed3f5ac3804734195da5365d4410bb10 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.255 T 22-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 VPUCM_RS07645 ed3f5ac3804734195da5365d4410bb10 302 PANTHER PTHR18964:SF134 1 301 9.6E-149 T 22-04-2016 VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 PRINTS PR00625 DnaJ domain signature 7 25 5.4E-24 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 PRINTS PR00625 DnaJ domain signature 61 80 5.4E-24 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 PRINTS PR00625 DnaJ domain signature 41 61 5.4E-24 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 PRINTS PR00625 DnaJ domain signature 25 40 5.4E-24 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 SMART SM00271 4 61 5.2E-29 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 PANTHER PTHR24078 4 305 1.4E-79 T 22-04-2016 VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 SUPERFAMILY SSF49493 217 299 1.31E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 PANTHER PTHR24078:SF190 4 305 1.4E-79 T 22-04-2016 VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 Pfam PF00226 DnaJ domain 5 66 4.3E-26 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 SUPERFAMILY SSF49493 127 223 3.14E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 SUPERFAMILY SSF46565 1 119 4.84E-33 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 Gene3D G3DSA:2.60.260.20 214 289 9.2E-17 T 22-04-2016 VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 Gene3D G3DSA:1.10.287.110 1 114 7.8E-33 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 Pfam PF01556 DnaJ C terminal domain 134 288 8.9E-36 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal VPUCM_RS03930 c1b43962838b890e7f8265025f218c30 316 Gene3D G3DSA:2.60.260.20 124 212 6.3E-21 T 22-04-2016 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 3.6E-39 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PANTHER PTHR10357 233 330 3.4E-108 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PANTHER PTHR10357 442 690 3.4E-108 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PANTHER PTHR10357 184 217 3.4E-108 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PANTHER PTHR10357 359 420 3.4E-108 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 SUPERFAMILY SSF51445 189 665 7.04E-79 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PIRSF PIRSF036917 1 694 0.0 T 22-04-2016 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 SMART SM00642 203 656 3.3E-78 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 Gene3D G3DSA:3.20.20.80 193 664 3.0E-88 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PANTHER PTHR10357:SF11 233 330 3.4E-108 T 22-04-2016 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PANTHER PTHR10357:SF11 442 690 3.4E-108 T 22-04-2016 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PANTHER PTHR10357:SF11 184 217 3.4E-108 T 22-04-2016 VPUCM_RS00085 8eceb403fcd9cf71607aa2d81dbc67ca 694 PANTHER PTHR10357:SF11 359 420 3.4E-108 T 22-04-2016 VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 PANTHER PTHR39583 8 226 6.6E-59 T 22-04-2016 VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 SUPERFAMILY SSF54523 49 212 1.49E-58 T 22-04-2016 VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 Gene3D G3DSA:2.10.70.20 162 210 1.1E-22 T 22-04-2016 VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 2.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 Pfam PF11612 Type II secretion system (T2SS), protein J 68 204 6.9E-41 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 PANTHER PTHR39583:SF1 8 226 6.6E-59 T 22-04-2016 VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 Pfam PF13633 Prokaryotic N-terminal methylation site 16 41 5.6E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 Gene3D G3DSA:3.10.610.10 47 160 1.2E-47 T 22-04-2016 VPUCM_RS00695 384c515c380041c5e85a8c11f7091aee 227 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 16 207 1.5E-80 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 PANTHER PTHR30115 1 112 4.4E-81 T 22-04-2016 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 SMART SM00938 4 105 2.3E-68 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 PANTHER PTHR30115:SF15 1 112 4.4E-81 T 22-04-2016 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 Gene3D G3DSA:3.30.70.120 1 112 8.3E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 52 75 6.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 83 103 6.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 23 41 6.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 2 17 6.8E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 PIRSF PIRSF039144 1 112 8.9E-56 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 SUPERFAMILY SSF54913 1 112 2.8E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VPUCM_RS12900 6546fa979e1da1fc69d387a25b8d4279 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS03760 95a9f7fe82b6c0d45cfdf8144e9c60fc 1230 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 1073 1148 3.0E-27 T 22-04-2016 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VPUCM_RS03760 95a9f7fe82b6c0d45cfdf8144e9c60fc 1230 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 783 918 2.6E-15 T 22-04-2016 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VPUCM_RS21165 86ed494acfe8e5b1cf1a29bdea52db19 87 Gene3D G3DSA:3.40.50.1100 4 86 3.5E-12 T 22-04-2016 VPUCM_RS21165 86ed494acfe8e5b1cf1a29bdea52db19 87 SUPERFAMILY SSF53686 1 86 9.6E-12 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS21165 86ed494acfe8e5b1cf1a29bdea52db19 87 PANTHER PTHR10314 1 87 2.7E-45 T 22-04-2016 VPUCM_RS21165 86ed494acfe8e5b1cf1a29bdea52db19 87 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 1 84 7.5E-7 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS21165 86ed494acfe8e5b1cf1a29bdea52db19 87 PANTHER PTHR10314:SF126 1 87 2.7E-45 T 22-04-2016 VPUCM_RS11940 770c99463c11d8f5abae93a0553e0221 92 PANTHER PTHR36417:SF1 1 90 2.2E-55 T 22-04-2016 VPUCM_RS11940 770c99463c11d8f5abae93a0553e0221 92 SUPERFAMILY SSF52833 5 87 2.46E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11940 770c99463c11d8f5abae93a0553e0221 92 PANTHER PTHR36417 1 90 2.2E-55 T 22-04-2016 VPUCM_RS11940 770c99463c11d8f5abae93a0553e0221 92 Pfam PF10262 Rdx family 6 78 1.4E-31 T 22-04-2016 IPR011893 Selenoprotein, Rdx type VPUCM_RS11940 770c99463c11d8f5abae93a0553e0221 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.0E-24 T 22-04-2016 IPR011893 Selenoprotein, Rdx type VPUCM_RS11940 770c99463c11d8f5abae93a0553e0221 92 Gene3D G3DSA:3.40.30.10 3 91 1.1E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS17670 a29debd8c217ded9e3c03b6c5b487368 156 PANTHER PTHR21091 1 142 8.2E-33 T 22-04-2016 VPUCM_RS17670 a29debd8c217ded9e3c03b6c5b487368 156 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 119 1.2E-19 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VPUCM_RS17670 a29debd8c217ded9e3c03b6c5b487368 156 Gene3D G3DSA:3.40.1010.10 1 23 5.1E-4 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VPUCM_RS17670 a29debd8c217ded9e3c03b6c5b487368 156 SUPERFAMILY SSF53790 1 150 4.97E-39 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VPUCM_RS17670 a29debd8c217ded9e3c03b6c5b487368 156 PANTHER PTHR21091:SF16 1 142 8.2E-33 T 22-04-2016 VPUCM_RS17670 a29debd8c217ded9e3c03b6c5b487368 156 Gene3D G3DSA:3.30.950.10 24 154 7.3E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VPUCM_RS08100 4cc30ebc8d52d8531b656c84478db7b2 256 PANTHER PTHR30222:SF6 1 256 1.5E-163 T 22-04-2016 VPUCM_RS08100 4cc30ebc8d52d8531b656c84478db7b2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08100 4cc30ebc8d52d8531b656c84478db7b2 256 Gene3D G3DSA:1.10.3720.10 3 254 1.3E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08100 4cc30ebc8d52d8531b656c84478db7b2 256 PANTHER PTHR30222 1 256 1.5E-163 T 22-04-2016 VPUCM_RS08100 4cc30ebc8d52d8531b656c84478db7b2 256 SUPERFAMILY SSF161098 4 254 4.67E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 PANTHER PTHR10996:SF111 1 331 6.0E-162 T 22-04-2016 VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 PANTHER PTHR10996 1 331 6.0E-162 T 22-04-2016 VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 7.5E-33 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 285 1.2E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 Gene3D G3DSA:3.40.50.720 1 115 1.0E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.266 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 Gene3D G3DSA:3.40.50.720 116 259 4.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 3.6E-27 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 SUPERFAMILY SSF51735 93 257 1.07E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11330 748708da1a3a268b0fbb1661c2a1f73a 377 SUPERFAMILY SSF52283 1 109 1.51E-23 T 22-04-2016 VPUCM_RS09845 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Gene3D G3DSA:3.40.50.10490 96 270 1.3E-36 T 22-04-2016 VPUCM_RS09845 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 PANTHER PTHR30514:SF7 1 271 1.3E-194 T 22-04-2016 VPUCM_RS09845 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 PANTHER PTHR30514 1 271 1.3E-194 T 22-04-2016 VPUCM_RS09845 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Pfam PF01380 SIS domain 124 252 4.4E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VPUCM_RS09845 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Gene3D G3DSA:1.10.10.10 1 80 2.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09845 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 SUPERFAMILY SSF53697 93 278 3.24E-39 T 22-04-2016 VPUCM_RS09845 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS09845 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-28 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VPUCM_RS12930 1b54ceee7516a5a0e7c0d6ac3a3da5c8 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 229 3.4E-76 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VPUCM_RS12930 1b54ceee7516a5a0e7c0d6ac3a3da5c8 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 1.0E-74 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VPUCM_RS12930 1b54ceee7516a5a0e7c0d6ac3a3da5c8 238 PANTHER PTHR30545:SF2 1 228 5.1E-84 T 22-04-2016 VPUCM_RS12930 1b54ceee7516a5a0e7c0d6ac3a3da5c8 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.209 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VPUCM_RS12930 1b54ceee7516a5a0e7c0d6ac3a3da5c8 238 PANTHER PTHR30545 1 228 5.1E-84 T 22-04-2016 VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 PANTHER PTHR11014:SF61 1 362 1.5E-131 T 22-04-2016 VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 Gene3D G3DSA:3.40.630.10 3 177 6.0E-67 T 22-04-2016 VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 Gene3D G3DSA:3.40.630.10 287 366 6.0E-67 T 22-04-2016 VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 PANTHER PTHR11014 1 362 1.5E-131 T 22-04-2016 VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 Pfam PF07687 Peptidase dimerisation domain 182 273 5.1E-15 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 Gene3D G3DSA:3.30.70.360 178 281 5.2E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 5.5E-17 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 SUPERFAMILY SSF55031 177 289 4.58E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 4.9E-158 T 22-04-2016 IPR010162 Peptidase M20B, peptidase T VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 SUPERFAMILY SSF53187 7 177 3.77E-58 T 22-04-2016 VPUCM_RS09325 8dc4650a08df2606c1ce406012a9bd30 368 SUPERFAMILY SSF53187 287 367 3.77E-58 T 22-04-2016 VPUCM_RS13540 a73aca0141407ee70a26b5a7eef476ec 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 20.511 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VPUCM_RS13540 a73aca0141407ee70a26b5a7eef476ec 96 SUPERFAMILY SSF69786 3 96 5.62E-32 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VPUCM_RS13540 a73aca0141407ee70a26b5a7eef476ec 96 PANTHER PTHR13420 12 96 2.0E-24 T 22-04-2016 VPUCM_RS13540 a73aca0141407ee70a26b5a7eef476ec 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 1.2E-26 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 VPUCM_RS13540 a73aca0141407ee70a26b5a7eef476ec 96 SMART SM01152 8 84 8.2E-39 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VPUCM_RS13540 a73aca0141407ee70a26b5a7eef476ec 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 2.2E-25 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VPUCM_RS13540 a73aca0141407ee70a26b5a7eef476ec 96 Gene3D G3DSA:3.30.1200.10 2 91 5.1E-30 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VPUCM_RS04795 3f98b4ffc630fce87f110445e677e630 191 PANTHER PTHR30390:SF6 2 191 2.9E-91 T 22-04-2016 VPUCM_RS04795 3f98b4ffc630fce87f110445e677e630 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.834 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VPUCM_RS04795 3f98b4ffc630fce87f110445e677e630 191 PANTHER PTHR30390 2 191 2.9E-91 T 22-04-2016 VPUCM_RS04795 3f98b4ffc630fce87f110445e677e630 191 SUPERFAMILY SSF53697 1 189 4.25E-52 T 22-04-2016 VPUCM_RS04795 3f98b4ffc630fce87f110445e677e630 191 Gene3D G3DSA:3.40.50.10490 1 190 6.4E-64 T 22-04-2016 VPUCM_RS04795 3f98b4ffc630fce87f110445e677e630 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.6E-81 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VPUCM_RS04795 3f98b4ffc630fce87f110445e677e630 191 Pfam PF13580 SIS domain 12 146 6.0E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VPUCM_RS13560 3a846422e96727413e6a62ceb80c1de5 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.6E-130 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VPUCM_RS13560 3a846422e96727413e6a62ceb80c1de5 306 Pfam PF04960 Glutaminase 22 306 1.0E-113 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VPUCM_RS13560 3a846422e96727413e6a62ceb80c1de5 306 Gene3D G3DSA:3.40.710.10 2 306 5.6E-125 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS13560 3a846422e96727413e6a62ceb80c1de5 306 PANTHER PTHR12544 6 306 6.7E-158 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VPUCM_RS13560 3a846422e96727413e6a62ceb80c1de5 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.208 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VPUCM_RS13560 3a846422e96727413e6a62ceb80c1de5 306 SUPERFAMILY SSF56601 4 306 4.07E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 SUPERFAMILY SSF52540 73 145 7.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 SUPERFAMILY SSF52540 236 368 7.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.2E-73 T 22-04-2016 IPR010650 PrkA C-terminal domain VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 SMART SM00763 19 380 1.6E-220 T 22-04-2016 IPR013153 PrkA AAA domain VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 PANTHER PTHR30267 1 644 3.0E-300 T 22-04-2016 VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 PIRSF PIRSF000549 1 644 7.0E-290 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 PANTHER PTHR30267:SF2 1 644 3.0E-300 T 22-04-2016 VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 Gene3D G3DSA:3.40.50.300 243 329 4.5E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 Gene3D G3DSA:3.40.50.300 74 158 4.5E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05555 48c188bf134c8d1e161ff16915f08dab 644 Pfam PF08298 PrkA AAA domain 19 380 1.5E-176 T 22-04-2016 IPR013153 PrkA AAA domain VPUCM_RS08320 a4abe8bb68a25ec83a228c82b8560f7f 172 Gene3D G3DSA:3.10.129.10 2 168 7.3E-60 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS08320 a4abe8bb68a25ec83a228c82b8560f7f 172 Pfam PF07977 FabA-like domain 29 158 3.0E-54 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VPUCM_RS08320 a4abe8bb68a25ec83a228c82b8560f7f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.377 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPUCM_RS08320 a4abe8bb68a25ec83a228c82b8560f7f 172 SUPERFAMILY SSF54637 4 169 5.47E-57 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS08320 a4abe8bb68a25ec83a228c82b8560f7f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 5.3E-92 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 PIRSF PIRSF000102 1 307 9.2E-63 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 1.9E-50 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.8E-47 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 PANTHER PTHR11540:SF22 1 311 2.8E-220 T 22-04-2016 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 PANTHER PTHR11540 1 311 2.8E-220 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.449 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 Gene3D G3DSA:3.90.110.10 147 311 4.3E-65 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 SUPERFAMILY SSF51735 1 145 5.57E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 9.7E-130 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 Gene3D G3DSA:3.40.50.720 1 145 3.4E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01745 ef99383015c803bec86cced4a5668eac 311 SUPERFAMILY SSF56327 147 309 5.71E-44 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VPUCM_RS13550 727089e41690eead45eb5b1ed734ea24 200 SUPERFAMILY SSF52972 1 194 4.97E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VPUCM_RS13550 727089e41690eead45eb5b1ed734ea24 200 Pfam PF01725 Ham1 family 4 191 8.3E-57 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VPUCM_RS13550 727089e41690eead45eb5b1ed734ea24 200 PANTHER PTHR11067:SF9 1 194 2.8E-84 T 22-04-2016 VPUCM_RS13550 727089e41690eead45eb5b1ed734ea24 200 PANTHER PTHR11067 1 194 2.8E-84 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VPUCM_RS13550 727089e41690eead45eb5b1ed734ea24 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.144 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VPUCM_RS13550 727089e41690eead45eb5b1ed734ea24 200 Gene3D G3DSA:3.90.950.10 1 195 4.0E-82 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VPUCM_RS13550 727089e41690eead45eb5b1ed734ea24 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.8E-65 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 PANTHER PTHR21098:SF4 1 201 6.9E-114 T 22-04-2016 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 SUPERFAMILY SSF63380 93 198 1.87E-30 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 PIRSF PIRSF000498 1 203 1.4E-67 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 Pfam PF00677 Lumazine binding domain 100 184 5.1E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 Pfam PF00677 Lumazine binding domain 3 87 7.8E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 Gene3D G3DSA:2.40.30.20 105 199 7.0E-27 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 Gene3D G3DSA:2.40.30.20 5 104 6.0E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 5.6E-75 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 SUPERFAMILY SSF63380 1 93 2.64E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS07570 5320e6ec54474c8052b4a96085b63220 203 PANTHER PTHR21098 1 201 6.9E-114 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.262 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 PANTHER PTHR10993 1 209 9.0E-77 T 22-04-2016 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 SUPERFAMILY SSF55681 2 204 2.4E-71 T 22-04-2016 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 6.2E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 PIRSF PIRSF016262 1 216 4.3E-63 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-25 T 22-04-2016 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 5.9E-73 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS12525 60ab413049b5299bf457a377ae69bd74 220 Gene3D G3DSA:3.90.1550.10 3 201 5.1E-72 T 22-04-2016 VPUCM_RS09635 2333fa2a791670ec65b7a0987d51e028 247 Pfam PF07070 SpoOM protein 2 215 4.4E-63 T 22-04-2016 IPR009776 Sporulation stage 0, protein M VPUCM_RS09635 2333fa2a791670ec65b7a0987d51e028 247 PANTHER PTHR40053 1 214 1.2E-50 T 22-04-2016 VPUCM_RS09100 3418c60e16b4ee45eda11ac6b84eebda 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 290 1.7E-54 T 22-04-2016 VPUCM_RS09100 3418c60e16b4ee45eda11ac6b84eebda 309 Gene3D G3DSA:3.40.190.10 117 156 1.6E-7 T 22-04-2016 VPUCM_RS09100 3418c60e16b4ee45eda11ac6b84eebda 309 SUPERFAMILY SSF53850 29 274 1.15E-18 T 22-04-2016 VPUCM_RS08595 dd42f2825fb7a0e74e973abd61812b06 132 Gene3D G3DSA:3.90.1590.10 1 129 9.2E-30 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 VPUCM_RS08595 dd42f2825fb7a0e74e973abd61812b06 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 22 104 2.4E-14 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 VPUCM_RS08595 dd42f2825fb7a0e74e973abd61812b06 132 SUPERFAMILY SSF51316 1 121 2.09E-31 T 22-04-2016 IPR011057 Mss4-like VPUCM_RS08595 dd42f2825fb7a0e74e973abd61812b06 132 PANTHER PTHR33337 3 112 4.2E-13 T 22-04-2016 VPUCM_RS18230 1450e6407392cd646f09be4308c2bfd9 304 PANTHER PTHR10169 1 304 1.8E-229 T 22-04-2016 VPUCM_RS18230 1450e6407392cd646f09be4308c2bfd9 304 Gene3D G3DSA:3.90.199.10 266 304 1.1E-77 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VPUCM_RS18230 1450e6407392cd646f09be4308c2bfd9 304 Gene3D G3DSA:3.90.199.10 1 170 1.1E-77 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VPUCM_RS18230 1450e6407392cd646f09be4308c2bfd9 304 PANTHER PTHR10169:SF30 1 304 1.8E-229 T 22-04-2016 VPUCM_RS18230 1450e6407392cd646f09be4308c2bfd9 304 Gene3D G3DSA:3.30.1360.40 171 264 1.8E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VPUCM_RS18230 1450e6407392cd646f09be4308c2bfd9 304 SUPERFAMILY SSF56719 1 304 1.44E-107 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VPUCM_RS18230 1450e6407392cd646f09be4308c2bfd9 304 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 1 304 2.2E-98 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS18230 1450e6407392cd646f09be4308c2bfd9 304 SMART SM00434 1 304 1.0E-91 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS07455 7dbf7831f76143c7bf15e33c823eacad 176 SUPERFAMILY SSF53955 46 156 1.07E-8 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS07455 7dbf7831f76143c7bf15e33c823eacad 176 Gene3D G3DSA:1.10.530.10 50 82 1.1E-4 T 22-04-2016 VPUCM_RS07980 d9fe8b9e12a44618f923983b0b7bc1be 66 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 37 3.8E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VPUCM_RS07980 d9fe8b9e12a44618f923983b0b7bc1be 66 PIRSF PIRSF036704 1 66 2.4E-34 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VPUCM_RS07980 d9fe8b9e12a44618f923983b0b7bc1be 66 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 66 6.4E-33 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.40.190.10 44 125 3.1E-8 T 22-04-2016 VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 SMART SM00267 500 660 3.1E-21 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 656 7.3E-28 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 191 2.0E-16 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 257 459 1.0E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.40.190.10 362 415 5.2E-4 T 22-04-2016 VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 SMART SM00062 29 227 2.4E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.40.190.10 126 185 3.2E-5 T 22-04-2016 VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 SUPERFAMILY SSF55073 516 656 4.87E-27 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 SUPERFAMILY SSF53850 250 460 1.02E-26 T 22-04-2016 VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.40.190.10 248 361 7.3E-13 T 22-04-2016 VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.30.70.270 512 656 5.2E-30 T 22-04-2016 VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 655 3.9E-26 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS05325 445cbe958061cc3a93784b51ea2ee801 667 SUPERFAMILY SSF53850 44 200 2.18E-22 T 22-04-2016 VPUCM_RS14575 bcd2d8857f8a3cb3fa29d37fe29131a0 335 PANTHER PTHR10794 1 329 8.8E-79 T 22-04-2016 VPUCM_RS14575 bcd2d8857f8a3cb3fa29d37fe29131a0 335 PANTHER PTHR10794:SF46 1 329 8.8E-79 T 22-04-2016 VPUCM_RS14575 bcd2d8857f8a3cb3fa29d37fe29131a0 335 SUPERFAMILY SSF53474 32 299 8.04E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS14575 bcd2d8857f8a3cb3fa29d37fe29131a0 335 Gene3D G3DSA:3.40.50.1820 56 300 8.1E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS14575 bcd2d8857f8a3cb3fa29d37fe29131a0 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 3.1E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS14575 bcd2d8857f8a3cb3fa29d37fe29131a0 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- VPUCM_RS14575 bcd2d8857f8a3cb3fa29d37fe29131a0 335 PIRSF PIRSF005211 1 334 1.1E-105 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 Gene3D G3DSA:3.40.192.10 7 140 5.2E-50 T 22-04-2016 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.1E-89 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 SUPERFAMILY SSF53223 1 122 5.08E-40 T 22-04-2016 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 PANTHER PTHR10025 1 286 4.3E-176 T 22-04-2016 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 6.9E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.0E-69 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.077 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 SUPERFAMILY SSF51735 123 280 4.63E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04930 ca80f34bafd823a1039694b7ed7bea5d 286 Gene3D G3DSA:3.40.50.720 141 264 4.1E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS05820 896aecf613ab32684d1fe1797d037fac 450 PANTHER PTHR38733:SF1 60 441 2.0E-70 T 22-04-2016 VPUCM_RS05820 896aecf613ab32684d1fe1797d037fac 450 PANTHER PTHR38733 60 441 2.0E-70 T 22-04-2016 VPUCM_RS05820 896aecf613ab32684d1fe1797d037fac 450 Pfam PF10117 McrBC 5-methylcytosine restriction system component 64 393 3.1E-97 T 22-04-2016 IPR019292 5-methylcytosine restriction system component VPUCM_RS10040 5d8e44254a6974c23b602c46a82ffcb2 225 PANTHER PTHR12677:SF5 4 202 1.9E-39 T 22-04-2016 VPUCM_RS10040 5d8e44254a6974c23b602c46a82ffcb2 225 PANTHER PTHR12677 4 202 1.9E-39 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VPUCM_RS10040 5d8e44254a6974c23b602c46a82ffcb2 225 Pfam PF09335 SNARE associated Golgi protein 62 178 1.3E-24 T 22-04-2016 IPR032816 SNARE associated Golgi protein VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 SMART SM00471 62 268 4.0E-8 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 440 1.3E-128 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 Gene3D G3DSA:1.10.3210.10 9 254 3.9E-68 T 22-04-2016 IPR006674 HD domain VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 Pfam PF01966 HD domain 66 151 1.2E-7 T 22-04-2016 IPR006674 HD domain VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 3 439 35.167 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 Gene3D G3DSA:1.10.3410.10 255 358 5.2E-27 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 PANTHER PTHR11373 12 195 2.0E-48 T 22-04-2016 VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 SUPERFAMILY SSF109604 236 441 3.64E-79 T 22-04-2016 VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 SUPERFAMILY SSF109604 23 171 3.64E-79 T 22-04-2016 VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 Gene3D G3DSA:1.10.3550.10 359 436 4.6E-4 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain VPUCM_RS05165 341cb2971f53c1c31f799a5e39e7c6e3 444 Pfam PF13286 Phosphohydrolase-associated domain 347 437 1.7E-25 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain VPUCM_RS13585 10319446766a2c160e097d6858847d6a 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VPUCM_RS13585 10319446766a2c160e097d6858847d6a 379 SUPERFAMILY SSF53955 188 371 2.34E-36 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS13585 10319446766a2c160e097d6858847d6a 379 Gene3D G3DSA:1.10.530.10 181 374 9.6E-43 T 22-04-2016 VPUCM_RS13585 10319446766a2c160e097d6858847d6a 379 PANTHER PTHR21666 190 376 3.0E-47 T 22-04-2016 VPUCM_RS13585 10319446766a2c160e097d6858847d6a 379 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 1.6E-79 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal VPUCM_RS13585 10319446766a2c160e097d6858847d6a 379 Pfam PF01464 Transglycosylase SLT domain 211 332 3.8E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VPUCM_RS13585 10319446766a2c160e097d6858847d6a 379 PANTHER PTHR21666:SF224 190 376 3.0E-47 T 22-04-2016 VPUCM_RS04875 866b0eab9db3d95ce4077048e2c7bfe8 185 PANTHER PTHR37530 1 158 3.4E-45 T 22-04-2016 VPUCM_RS04875 866b0eab9db3d95ce4077048e2c7bfe8 185 PIRSF PIRSF004982 2 185 1.4E-62 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VPUCM_RS04875 866b0eab9db3d95ce4077048e2c7bfe8 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 163 5.7E-45 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VPUCM_RS04875 866b0eab9db3d95ce4077048e2c7bfe8 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 155 4.9E-36 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VPUCM_RS03460 4494bddb739bb2eb38c7a3f7fffcb302 292 PANTHER PTHR30217 1 292 3.0E-194 T 22-04-2016 VPUCM_RS03460 4494bddb739bb2eb38c7a3f7fffcb302 292 PANTHER PTHR30217:SF8 1 292 3.0E-194 T 22-04-2016 VPUCM_RS03460 4494bddb739bb2eb38c7a3f7fffcb302 292 Pfam PF01136 Peptidase family U32 81 237 2.5E-13 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 22-04-2016 IPR014748 Crontonase, C-terminal VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 Gene3D G3DSA:3.90.226.10 25 225 1.5E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 3.6E-78 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.404 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 SUPERFAMILY SSF52096 22 284 2.28E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 PANTHER PTHR11941:SF20 12 281 1.2E-194 T 22-04-2016 VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 PANTHER PTHR11941 12 281 1.2E-194 T 22-04-2016 VPUCM_RS05195 48aefd042fd0cf276d3551f7e685df01 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 6.2E-145 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS04170 c1798b393dc0575a1763a393d49ecf0b 483 Pfam PF00437 Type II/IV secretion system protein 132 409 4.5E-86 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS04170 c1798b393dc0575a1763a393d49ecf0b 483 SUPERFAMILY SSF52540 112 453 2.25E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04170 c1798b393dc0575a1763a393d49ecf0b 483 Gene3D G3DSA:3.30.450.90 129 226 4.6E-37 T 22-04-2016 VPUCM_RS04170 c1798b393dc0575a1763a393d49ecf0b 483 PANTHER PTHR30258 15 480 1.2E-131 T 22-04-2016 VPUCM_RS04170 c1798b393dc0575a1763a393d49ecf0b 483 Gene3D G3DSA:3.40.50.300 231 445 2.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04170 c1798b393dc0575a1763a393d49ecf0b 483 PANTHER PTHR30258:SF3 15 480 1.2E-131 T 22-04-2016 VPUCM_RS13120 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 PANTHER PTHR30353 20 152 3.2E-45 T 22-04-2016 IPR032818 DedA family VPUCM_RS13120 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 PANTHER PTHR30353:SF12 20 152 3.2E-45 T 22-04-2016 VPUCM_RS13120 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 136 0.007 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 VPUCM_RS13120 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 Pfam PF09335 SNARE associated Golgi protein 56 146 1.2E-9 T 22-04-2016 IPR032816 SNARE associated Golgi protein VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 PANTHER PTHR30330 1 474 1.3E-296 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 1.4E-163 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 Pfam PF01235 Sodium:alanine symporter family 48 453 5.1E-163 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 PANTHER PTHR30330:SF1 1 474 1.3E-296 T 22-04-2016 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 350 372 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 411 431 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS02475 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 2.8E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 SUPERFAMILY SSF54211 191 330 2.31E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 7.9E-40 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 SUPERFAMILY SSF55874 1 207 9.3E-54 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 2.8E-11 T 22-04-2016 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 667 25.293 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 SMART SM01340 212 330 3.5E-59 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 SUPERFAMILY SSF118116 483 668 4.05E-39 T 22-04-2016 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 Gene3D G3DSA:3.30.565.10 1 217 2.3E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 Pfam PF08676 MutL C terminal dimerisation domain 483 623 5.5E-30 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 PANTHER PTHR10073 3 333 2.8E-153 T 22-04-2016 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 SMART SM00853 486 629 1.5E-15 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.2E-103 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 VPUCM_RS14700 8b28c59600eeed3510530bdbf2fbbc6c 669 Gene3D G3DSA:3.30.230.10 218 329 1.7E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 SMART SM00650 25 197 4.9E-89 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 3.0E-77 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.427 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 Gene3D G3DSA:1.10.8.100 201 265 3.5E-24 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 SUPERFAMILY SSF53335 8 267 8.92E-80 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 5.4E-88 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 Gene3D G3DSA:3.40.50.150 8 197 1.2E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VPUCM_RS01800 5b85aac706a389ac7ecb564daf975a52 269 PANTHER PTHR11727 8 269 2.2E-100 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 Pfam PF00085 Thioredoxin 6 109 6.2E-15 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 Gene3D G3DSA:3.40.30.10 3 109 1.0E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 PANTHER PTHR10438:SF288 6 112 1.8E-38 T 22-04-2016 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 PANTHER PTHR10438:SF288 233 254 1.8E-38 T 22-04-2016 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 Gene3D G3DSA:1.25.40.10 110 196 6.8E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.7E-29 T 22-04-2016 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 SUPERFAMILY SSF48452 115 246 4.51E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 Gene3D G3DSA:1.25.40.10 197 284 3.9E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 PANTHER PTHR10438 6 112 1.8E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 PANTHER PTHR10438 233 254 1.8E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 SUPERFAMILY SSF52833 3 113 3.27E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11980 a4d292d45622e50e9c78af3c9f4d37a0 284 Pfam PF14559 Tetratricopeptide repeat 124 190 8.8E-13 T 22-04-2016 VPUCM_RS13060 f3a81cf03809b3148dbb33accf2d72a0 64 Gene3D G3DSA:3.30.50.10 1 63 1.9E-25 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 VPUCM_RS13060 f3a81cf03809b3148dbb33accf2d72a0 64 PANTHER PTHR36150 2 64 5.1E-25 T 22-04-2016 VPUCM_RS13060 f3a81cf03809b3148dbb33accf2d72a0 64 PANTHER PTHR36150:SF1 2 64 5.1E-25 T 22-04-2016 VPUCM_RS13060 f3a81cf03809b3148dbb33accf2d72a0 64 Pfam PF03884 Domain of unknown function (DUF329) 7 57 3.1E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VPUCM_RS13060 f3a81cf03809b3148dbb33accf2d72a0 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.451 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VPUCM_RS13060 f3a81cf03809b3148dbb33accf2d72a0 64 SUPERFAMILY SSF57716 2 62 7.13E-21 T 22-04-2016 VPUCM_RS08765 b471655a91c0d4f98cb6fcbb852ff3e7 387 SUPERFAMILY SSF140931 264 372 1.57E-6 T 22-04-2016 IPR003812 Fido domain VPUCM_RS08765 b471655a91c0d4f98cb6fcbb852ff3e7 387 Pfam PF02661 Fic/DOC family 278 362 5.4E-5 T 22-04-2016 IPR003812 Fido domain VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 3.4E-75 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 PANTHER PTHR10010:SF14 1 225 3.2E-90 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 PANTHER PTHR10010 1 225 3.2E-90 T 22-04-2016 VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 128 210 2.3E-16 T 22-04-2016 IPR026022 PhoU domain VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 23 108 2.9E-23 T 22-04-2016 IPR026022 PhoU domain VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 SUPERFAMILY SSF109755 10 225 1.05E-69 T 22-04-2016 VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 PIRSF PIRSF003107 4 223 6.1E-70 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 124 226 2.9E-30 T 22-04-2016 VPUCM_RS02860 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 6 113 4.8E-38 T 22-04-2016 VPUCM_RS04490 85a3bd980ff96eea1e3fa3cbb8f797e1 210 PANTHER PTHR30586 2 210 3.7E-142 T 22-04-2016 VPUCM_RS04490 85a3bd980ff96eea1e3fa3cbb8f797e1 210 PANTHER PTHR30586:SF1 2 210 3.7E-142 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VPUCM_RS04490 85a3bd980ff96eea1e3fa3cbb8f797e1 210 PIRSF PIRSF006102 3 210 4.4E-73 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS04490 85a3bd980ff96eea1e3fa3cbb8f797e1 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.5E-109 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VPUCM_RS04490 85a3bd980ff96eea1e3fa3cbb8f797e1 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.857 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VPUCM_RS04490 85a3bd980ff96eea1e3fa3cbb8f797e1 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.3E-62 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 Gene3D G3DSA:3.50.50.60 3 179 7.3E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.0E-12 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.0E-12 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.0E-12 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.0E-12 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 SUPERFAMILY SSF51905 3 103 4.58E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 SUPERFAMILY SSF51905 220 347 4.58E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 Gene3D G3DSA:3.50.50.60 180 348 6.7E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PANTHER PTHR22912:SF140 2 187 3.8E-22 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PANTHER PTHR22912:SF140 203 341 3.8E-22 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 9.9E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PANTHER PTHR22912 2 187 3.8E-22 T 22-04-2016 VPUCM_RS05475 930b3775cda48639fb20637e07c180ad 429 PANTHER PTHR22912 203 341 3.8E-22 T 22-04-2016 VPUCM_RS02110 603f3f88c5e1dce69fc2947f0998bf81 216 Pfam PF00293 NUDIX domain 57 175 3.0E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS02110 603f3f88c5e1dce69fc2947f0998bf81 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VPUCM_RS02110 603f3f88c5e1dce69fc2947f0998bf81 216 Gene3D G3DSA:3.90.79.10 15 201 1.7E-53 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS02110 603f3f88c5e1dce69fc2947f0998bf81 216 PANTHER PTHR11839 1 207 1.6E-108 T 22-04-2016 VPUCM_RS02110 603f3f88c5e1dce69fc2947f0998bf81 216 SUPERFAMILY SSF55811 13 206 3.38E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS02110 603f3f88c5e1dce69fc2947f0998bf81 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 9.7E-65 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 VPUCM_RS02110 603f3f88c5e1dce69fc2947f0998bf81 216 PANTHER PTHR11839:SF5 1 207 1.6E-108 T 22-04-2016 VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 PANTHER PTHR11070:SF7 7 724 6.0E-244 T 22-04-2016 VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 Gene3D G3DSA:1.10.10.160 115 191 2.8E-23 T 22-04-2016 IPR013986 DExx box DNA helicase domain VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 3.0E-80 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 Gene3D G3DSA:3.40.50.300 8 111 9.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 Gene3D G3DSA:3.40.50.300 192 286 9.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 Gene3D G3DSA:1.10.486.10 389 542 5.4E-50 T 22-04-2016 VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 2.1E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 PANTHER PTHR11070 7 724 6.0E-244 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 SUPERFAMILY SSF52540 8 643 5.48E-181 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 Gene3D G3DSA:3.40.50.300 553 643 1.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15705 48f22d8ac4ea333e328685f1d129934e 724 Gene3D G3DSA:3.40.50.300 287 388 1.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 PANTHER PTHR21109 1 71 1.3E-26 T 22-04-2016 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 3.6E-23 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02015 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS11840 c212fb7931d7a0dfd8680b8aad92495a 180 Gene3D G3DSA:1.10.1220.10 1 38 3.3E-26 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VPUCM_RS11840 c212fb7931d7a0dfd8680b8aad92495a 180 Gene3D G3DSA:1.20.1380.10 68 180 3.0E-51 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VPUCM_RS11840 c212fb7931d7a0dfd8680b8aad92495a 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 9.6E-47 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VPUCM_RS11840 c212fb7931d7a0dfd8680b8aad92495a 180 PIRSF PIRSF019401 1 180 4.5E-54 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 VPUCM_RS11840 c212fb7931d7a0dfd8680b8aad92495a 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 41.771 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 VPUCM_RS11840 c212fb7931d7a0dfd8680b8aad92495a 180 SUPERFAMILY SSF47598 1 35 4.67E-14 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VPUCM_RS11840 c212fb7931d7a0dfd8680b8aad92495a 180 SUPERFAMILY SSF82808 67 179 2.48E-49 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VPUCM_RS17660 c5d256df94c44b9881dcd1fa0de75b86 131 SUPERFAMILY SSF56300 2 120 1.65E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS17660 c5d256df94c44b9881dcd1fa0de75b86 131 Gene3D G3DSA:3.60.21.10 2 121 5.1E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS17660 c5d256df94c44b9881dcd1fa0de75b86 131 Pfam PF00149 Calcineurin-like phosphoesterase 39 115 1.1E-4 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VPUCM_RS17660 c5d256df94c44b9881dcd1fa0de75b86 131 PANTHER PTHR11575:SF6 1 130 1.2E-46 T 22-04-2016 VPUCM_RS17660 c5d256df94c44b9881dcd1fa0de75b86 131 PRINTS PR01607 Apyrase family signature 71 88 4.7E-6 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS17660 c5d256df94c44b9881dcd1fa0de75b86 131 PRINTS PR01607 Apyrase family signature 99 122 4.7E-6 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS17660 c5d256df94c44b9881dcd1fa0de75b86 131 PANTHER PTHR11575 1 130 1.2E-46 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 5.1E-26 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 PANTHER PTHR22573 1 468 2.9E-131 T 22-04-2016 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 SUPERFAMILY SSF53738 2 187 2.16E-39 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 Gene3D G3DSA:3.30.310.50 395 468 2.5E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 7.4E-10 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 PANTHER PTHR22573:SF2 1 468 2.9E-131 T 22-04-2016 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 Gene3D G3DSA:3.40.120.10 2 179 5.3E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 1.1E-36 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 SUPERFAMILY SSF55957 374 466 4.45E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 Gene3D G3DSA:3.40.120.10 256 382 3.7E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 SUPERFAMILY SSF53738 250 379 2.0E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 Gene3D G3DSA:3.40.120.10 181 255 1.3E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS12875 7a39be6b722aeee79f58d0d37b4b9dd7 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.6E-24 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VPUCM_RS08270 975594f3eca5811f30640ef4c4d9f6c4 79 Pfam PF02303 Helix-destabilising protein 3 70 2.4E-23 T 22-04-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VPUCM_RS08270 975594f3eca5811f30640ef4c4d9f6c4 79 Gene3D G3DSA:2.40.50.140 4 73 6.4E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS08270 975594f3eca5811f30640ef4c4d9f6c4 79 SUPERFAMILY SSF50249 4 70 8.74E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS08270 975594f3eca5811f30640ef4c4d9f6c4 79 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 4 70 3.0E-18 T 22-04-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VPUCM_RS10250 709decfea4989a820ac82c0c43e10565 275 Pfam PF13460 NAD(P)H-binding 9 188 3.7E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10250 709decfea4989a820ac82c0c43e10565 275 SUPERFAMILY SSF51735 8 268 1.58E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10250 709decfea4989a820ac82c0c43e10565 275 Gene3D G3DSA:3.40.50.720 4 240 4.5E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13245 93b199a6d9b257c7164889c663990575 258 Gene3D G3DSA:3.40.1210.10 11 255 1.1E-90 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VPUCM_RS13245 93b199a6d9b257c7164889c663990575 258 Pfam PF01975 Survival protein SurE 13 191 7.9E-60 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VPUCM_RS13245 93b199a6d9b257c7164889c663990575 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 9.6E-74 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VPUCM_RS13245 93b199a6d9b257c7164889c663990575 258 PANTHER PTHR30457 11 254 6.5E-101 T 22-04-2016 VPUCM_RS13245 93b199a6d9b257c7164889c663990575 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 41.087 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VPUCM_RS13245 93b199a6d9b257c7164889c663990575 258 SUPERFAMILY SSF64167 11 256 7.72E-87 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 PANTHER PTHR30244 318 407 3.8E-100 T 22-04-2016 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 PANTHER PTHR30244 2 255 3.8E-100 T 22-04-2016 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 Pfam PF00700 Bacterial flagellin C-terminal helical region 323 407 4.1E-23 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 SUPERFAMILY SSF64518 1 407 3.4E-75 T 22-04-2016 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 141 1.1E-36 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 PRINTS PR00207 Flagellin signature 110 133 2.6E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 PRINTS PR00207 Flagellin signature 36 53 2.6E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 PRINTS PR00207 Flagellin signature 75 94 2.6E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 Gene3D G3DSA:1.20.1330.10 54 170 1.7E-54 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 Gene3D G3DSA:1.20.1330.10 310 363 1.7E-54 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 PANTHER PTHR30244:SF1 318 407 3.8E-100 T 22-04-2016 VPUCM_RS00900 b647912de2671f78b6880b3ef1cdc7c9 408 PANTHER PTHR30244:SF1 2 255 3.8E-100 T 22-04-2016 VPUCM_RS07875 ce4b206c108e8a9637b17a4b4bbd100a 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 5.1E-19 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VPUCM_RS07875 ce4b206c108e8a9637b17a4b4bbd100a 171 Gene3D G3DSA:2.40.160.20 7 170 1.5E-26 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS07875 ce4b206c108e8a9637b17a4b4bbd100a 171 SUPERFAMILY SSF56925 19 170 8.37E-28 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS13305 de240144151c651cf6633e4cdc70431a 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.839 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VPUCM_RS13305 de240144151c651cf6633e4cdc70431a 243 PANTHER PTHR30456:SF0 2 242 2.9E-148 T 22-04-2016 VPUCM_RS13305 de240144151c651cf6633e4cdc70431a 243 Gene3D G3DSA:3.20.20.70 3 241 1.2E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS13305 de240144151c651cf6633e4cdc70431a 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 8.0E-106 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VPUCM_RS13305 de240144151c651cf6633e4cdc70431a 243 SUPERFAMILY SSF63892 4 241 2.75E-102 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VPUCM_RS13305 de240144151c651cf6633e4cdc70431a 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 4.1E-100 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VPUCM_RS13305 de240144151c651cf6633e4cdc70431a 243 PANTHER PTHR30456 2 242 2.9E-148 T 22-04-2016 VPUCM_RS10295 0984e4412e6b8aaca6f17b2a90d199f2 423 PANTHER PTHR30026 9 419 7.5E-55 T 22-04-2016 VPUCM_RS10295 0984e4412e6b8aaca6f17b2a90d199f2 423 Pfam PF02321 Outer membrane efflux protein 229 407 1.2E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS10295 0984e4412e6b8aaca6f17b2a90d199f2 423 Pfam PF02321 Outer membrane efflux protein 28 204 4.3E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS10295 0984e4412e6b8aaca6f17b2a90d199f2 423 PANTHER PTHR30026:SF7 9 419 7.5E-55 T 22-04-2016 VPUCM_RS10295 0984e4412e6b8aaca6f17b2a90d199f2 423 SUPERFAMILY SSF56954 6 412 7.19E-78 T 22-04-2016 VPUCM_RS10295 0984e4412e6b8aaca6f17b2a90d199f2 423 Gene3D G3DSA:1.20.1600.10 24 411 2.2E-65 T 22-04-2016 VPUCM_RS00600 5983b22542806655bdd8ead1c0aed849 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 68 4.2E-12 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 PANTHER PTHR33175 1 91 2.5E-50 T 22-04-2016 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 SUPERFAMILY SSF47729 1 91 2.5E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.541 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 Gene3D G3DSA:4.10.520.10 1 91 5.3E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 SMART SM00411 1 91 4.4E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.8E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.8E-49 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VPUCM_RS10445 bce0b793b3c3290714a7577bcad9e3bc 93 PANTHER PTHR33175:SF5 1 91 2.5E-50 T 22-04-2016 VPUCM_RS00945 b0d310375d97d952c03f985618f366c8 224 PANTHER PTHR30471 1 224 2.9E-143 T 22-04-2016 VPUCM_RS00945 b0d310375d97d952c03f985618f366c8 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VPUCM_RS00945 b0d310375d97d952c03f985618f366c8 224 Pfam PF04002 RadC-like JAB domain 103 222 5.1E-45 T 22-04-2016 IPR025657 RadC-like JAB domain VPUCM_RS00945 b0d310375d97d952c03f985618f366c8 224 Gene3D G3DSA:3.40.140.10 101 224 4.7E-51 T 22-04-2016 VPUCM_RS00945 b0d310375d97d952c03f985618f366c8 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.2E-77 T 22-04-2016 IPR001405 RadC protein VPUCM_RS00945 b0d310375d97d952c03f985618f366c8 224 SUPERFAMILY SSF47781 17 91 2.51E-11 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VPUCM_RS00945 b0d310375d97d952c03f985618f366c8 224 SUPERFAMILY SSF102712 134 190 8.24E-5 T 22-04-2016 VPUCM_RS00945 b0d310375d97d952c03f985618f366c8 224 PANTHER PTHR30471:SF5 1 224 2.9E-143 T 22-04-2016 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF02080 TrkA-C domain 293 349 2.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF02080 TrkA-C domain 209 276 5.7E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 SUPERFAMILY SSF116726 206 283 2.88E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF03600 Citrate transporter 32 518 4.9E-24 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283 1 31 2.3E-67 T 22-04-2016 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283 51 216 2.3E-67 T 22-04-2016 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283 284 364 2.3E-67 T 22-04-2016 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283 412 572 2.3E-67 T 22-04-2016 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 SUPERFAMILY SSF116726 290 349 5.1E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 Gene3D G3DSA:3.30.70.1450 208 286 1.2E-17 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 Gene3D G3DSA:3.30.70.1450 290 349 1.5E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283:SF79 1 31 2.3E-67 T 22-04-2016 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283:SF79 51 216 2.3E-67 T 22-04-2016 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283:SF79 284 364 2.3E-67 T 22-04-2016 VPUCM_RS01615 88de3662e4e8edb030aa2b55098fb80f 574 PANTHER PTHR10283:SF79 412 572 2.3E-67 T 22-04-2016 VPUCM_RS09900 22b6ccc1d5d40b94e3f9a74d8ac7cf33 458 Pfam PF01554 MatE 252 413 3.0E-20 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS09900 22b6ccc1d5d40b94e3f9a74d8ac7cf33 458 Pfam PF01554 MatE 25 185 4.4E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS09900 22b6ccc1d5d40b94e3f9a74d8ac7cf33 458 PIRSF PIRSF006603 10 458 3.1E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS09900 22b6ccc1d5d40b94e3f9a74d8ac7cf33 458 PANTHER PTHR11206 15 457 1.8E-210 T 22-04-2016 VPUCM_RS09900 22b6ccc1d5d40b94e3f9a74d8ac7cf33 458 PANTHER PTHR11206:SF146 15 457 1.8E-210 T 22-04-2016 VPUCM_RS09900 22b6ccc1d5d40b94e3f9a74d8ac7cf33 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 423 5.5E-60 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 SMART SM00487 260 473 3.2E-11 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 SUPERFAMILY SSF52540 210 453 2.06E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 SUPERFAMILY SSF52540 659 759 7.86E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 PANTHER PTHR30195:SF16 539 812 2.4E-85 T 22-04-2016 VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 PANTHER PTHR30195:SF16 26 523 2.4E-85 T 22-04-2016 VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 756 5.3E-101 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 SUPERFAMILY SSF52540 299 350 7.86E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 Pfam PF04851 Type III restriction enzyme, res subunit 263 448 3.1E-27 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 763 1055 1.8E-35 T 22-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 PANTHER PTHR30195 539 812 2.4E-85 T 22-04-2016 VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 PANTHER PTHR30195 26 523 2.4E-85 T 22-04-2016 VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 6 206 7.5E-19 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VPUCM_RS03640 af582103d0e3f8267abe192d8b09e0bf 1078 Gene3D G3DSA:3.40.50.300 263 453 3.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 PANTHER PTHR24220:SF535 3 320 4.2E-147 T 22-04-2016 VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 Pfam PF00005 ABC transporter 22 178 1.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 313 1.1E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 PANTHER PTHR24220 3 320 4.2E-147 T 22-04-2016 VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 SMART SM00382 30 228 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 294 6.9E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 Gene3D G3DSA:3.40.50.300 1 252 1.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09345 2325690780b60735811b5c59677025ca 327 SUPERFAMILY SSF52540 1 249 2.66E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14540 82e8e5f3d50b423fdcaad1f87011edd4 313 Pfam PF01112 Asparaginase 7 310 2.4E-109 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VPUCM_RS14540 82e8e5f3d50b423fdcaad1f87011edd4 313 PANTHER PTHR10188 5 313 1.4E-125 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VPUCM_RS14540 82e8e5f3d50b423fdcaad1f87011edd4 313 PANTHER PTHR10188:SF24 5 313 1.4E-125 T 22-04-2016 VPUCM_RS14540 82e8e5f3d50b423fdcaad1f87011edd4 313 SUPERFAMILY SSF56235 5 307 1.32E-97 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS06195 98a4606363ec5c412516a5553e6c79a4 158 Gene3D G3DSA:1.25.40.20 68 133 3.9E-7 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain VPUCM_RS06195 98a4606363ec5c412516a5553e6c79a4 158 SUPERFAMILY SSF48403 39 128 1.4E-9 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain VPUCM_RS15230 2e3822f8edb8a3fb7c93648ac256d428 162 SUPERFAMILY SSF160369 4 159 1.12E-44 T 22-04-2016 VPUCM_RS15230 2e3822f8edb8a3fb7c93648ac256d428 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.068 T 22-04-2016 IPR022973 Ribosomal protein L10 VPUCM_RS15230 2e3822f8edb8a3fb7c93648ac256d428 162 PANTHER PTHR11560 1 162 7.2E-55 T 22-04-2016 VPUCM_RS15230 2e3822f8edb8a3fb7c93648ac256d428 162 Pfam PF00466 Ribosomal protein L10 5 101 1.1E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 PANTHER PTHR10174:SF2 48 336 1.6E-89 T 22-04-2016 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 SUPERFAMILY SSF51735 5 159 1.2E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.9E-129 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 5.2E-32 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 Gene3D G3DSA:3.40.50.720 1 144 1.5E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 PIRSF PIRSF000148 4 337 1.0E-134 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 PANTHER PTHR10174 48 336 1.6E-89 T 22-04-2016 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 SMART SM00859 6 121 2.7E-41 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 7.1E-62 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.451 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 Gene3D G3DSA:3.30.360.10 145 315 1.1E-81 T 22-04-2016 VPUCM_RS11325 ea77d6f35e6ec8a89bc2b8f1833614da 337 SUPERFAMILY SSF55347 131 320 1.07E-78 T 22-04-2016 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:1.10.580.10 52 280 8.4E-100 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 SUPERFAMILY SSF48256 4 428 9.68E-170 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 PIRSF PIRSF001369 38 429 9.4E-174 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 PANTHER PTHR11739 39 429 2.6E-207 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 2.6E-135 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 2.3E-238 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 379 393 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 296 316 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 359 375 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 219 234 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 165 178 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 241 269 1.8E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS11820 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:1.10.230.10 281 373 1.3E-44 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 SUPERFAMILY SSF64518 172 411 1.83E-26 T 22-04-2016 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 SUPERFAMILY SSF64518 537 645 1.83E-26 T 22-04-2016 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 600 645 7.3E-9 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 PANTHER PTHR30033:SF1 1 418 4.4E-102 T 22-04-2016 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 PANTHER PTHR30033:SF1 445 646 4.4E-102 T 22-04-2016 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 2.0E-8 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.0E-8 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 2.0E-8 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.0E-8 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 PANTHER PTHR30033 1 418 4.4E-102 T 22-04-2016 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 PANTHER PTHR30033 445 646 4.4E-102 T 22-04-2016 VPUCM_RS12100 5754b748594291b8c7c7a8fcaafe08e1 646 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 328 9.4E-61 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VPUCM_RS14465 163b5565b48decf16ad5bf5e0c3457d2 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VPUCM_RS14465 163b5565b48decf16ad5bf5e0c3457d2 106 SUPERFAMILY SSF47598 3 104 8.67E-57 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VPUCM_RS14465 163b5565b48decf16ad5bf5e0c3457d2 106 Hamap MF_00744 Met repressor [metJ]. 1 105 34.758 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VPUCM_RS14465 163b5565b48decf16ad5bf5e0c3457d2 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.5E-59 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VPUCM_RS14465 163b5565b48decf16ad5bf5e0c3457d2 106 Gene3D G3DSA:1.10.140.10 2 104 7.0E-63 T 22-04-2016 IPR023453 Methionine repressor MetJ domain VPUCM_RS13250 28723d6d4e8736e7ed91b467a8e05f4f 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 337 6.7E-22 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS13250 28723d6d4e8736e7ed91b467a8e05f4f 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 4.8E-42 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS13250 28723d6d4e8736e7ed91b467a8e05f4f 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS13250 28723d6d4e8736e7ed91b467a8e05f4f 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.805 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS13250 28723d6d4e8736e7ed91b467a8e05f4f 347 PANTHER PTHR13326 10 339 1.8E-71 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS13250 28723d6d4e8736e7ed91b467a8e05f4f 347 SUPERFAMILY SSF55120 6 339 2.88E-98 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 PANTHER PTHR23429 5 495 1.5E-237 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 SUPERFAMILY SSF55347 181 489 8.17E-113 T 22-04-2016 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 1.03E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 1.03E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 1.03E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 1.03E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 1.03E-49 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 PANTHER PTHR23429:SF0 5 495 1.5E-237 T 22-04-2016 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 Gene3D G3DSA:3.30.360.10 191 486 4.7E-120 T 22-04-2016 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 1.6E-203 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 85.253 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 5.3E-65 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 SUPERFAMILY SSF51735 4 194 2.23E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 Gene3D G3DSA:3.40.50.720 5 190 1.4E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 7.3E-115 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS08885 4901f9b5ef9a74f5d22b9efc190d5990 500 PIRSF PIRSF000110 3 489 1.1E-178 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 VPUCM_RS09970 6973f3e1692c8e67a8442ae8e2cb5a76 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-38 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VPUCM_RS09970 6973f3e1692c8e67a8442ae8e2cb5a76 92 SUPERFAMILY SSF50715 1 92 4.19E-28 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VPUCM_RS09970 6973f3e1692c8e67a8442ae8e2cb5a76 92 Pfam PF01386 Ribosomal L25p family 4 89 3.8E-22 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VPUCM_RS09970 6973f3e1692c8e67a8442ae8e2cb5a76 92 Gene3D G3DSA:2.40.240.10 1 92 4.4E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VPUCM_RS09970 6973f3e1692c8e67a8442ae8e2cb5a76 92 PANTHER PTHR33284 1 92 5.1E-36 T 22-04-2016 VPUCM_RS09970 6973f3e1692c8e67a8442ae8e2cb5a76 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.525 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 Gene3D G3DSA:3.20.20.60 424 733 4.0E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 SMART SM00065 17 163 1.4E-21 T 22-04-2016 IPR003018 GAF domain GO:0005515 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 PANTHER PTHR22931 181 715 1.8E-283 T 22-04-2016 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 SUPERFAMILY SSF55781 2 158 2.18E-31 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 Pfam PF01590 GAF domain 17 153 9.6E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 SUPERFAMILY SSF51621 423 714 3.14E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 1.8E-15 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 1.2E-21 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 2.3E-137 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 22-04-2016 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 22-04-2016 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 22-04-2016 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 22-04-2016 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 Gene3D G3DSA:3.50.30.10 302 414 2.9E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 SUPERFAMILY SSF47831 204 311 6.28E-27 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 SUPERFAMILY SSF52009 293 412 7.19E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 PANTHER PTHR22931:SF23 181 715 1.8E-283 T 22-04-2016 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 2.0E-96 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 Gene3D G3DSA:1.10.274.10 201 301 1.5E-30 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VPUCM_RS02560 e4eee5972ccee4d83daab647e1dc8bc0 748 Gene3D G3DSA:3.30.450.40 1 160 1.2E-42 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS09570 d15f2739bb2236d42ac972bc7da1c78a 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.925 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VPUCM_RS09570 d15f2739bb2236d42ac972bc7da1c78a 327 PANTHER PTHR11538 92 327 1.3E-113 T 22-04-2016 VPUCM_RS09570 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.4E-106 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VPUCM_RS09570 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF46589 14 99 1.62E-22 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VPUCM_RS09570 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.1E-25 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VPUCM_RS09570 d15f2739bb2236d42ac972bc7da1c78a 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.8E-111 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VPUCM_RS09570 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF55681 92 327 1.73E-82 T 22-04-2016 VPUCM_RS09570 d15f2739bb2236d42ac972bc7da1c78a 327 Gene3D G3DSA:3.30.930.10 10 327 1.5E-133 T 22-04-2016 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.55 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 SUPERFAMILY SSF52210 239 385 2.35E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 PANTHER PTHR11815 1 388 1.6E-227 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 Pfam PF08442 ATP-grasp domain 2 203 3.6E-79 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.0E-174 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 Pfam PF00549 CoA-ligase 262 382 5.3E-25 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.40.50.261 241 383 5.6E-66 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.30.470.20 96 239 1.4E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.30.1490.20 22 95 1.5E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 SUPERFAMILY SSF56059 1 238 7.81E-79 T 22-04-2016 VPUCM_RS11785 c83b318316a807d22c13a5d87739508c 388 PIRSF PIRSF001554 1 388 3.1E-154 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VPUCM_RS02870 79ac0c52cf7d42c00870da09e5dedc16 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 247 41.837 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VPUCM_RS02870 79ac0c52cf7d42c00870da09e5dedc16 247 PANTHER PTHR12598:SF0 5 247 6.2E-98 T 22-04-2016 VPUCM_RS02870 79ac0c52cf7d42c00870da09e5dedc16 247 PANTHER PTHR12598 5 247 6.2E-98 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VPUCM_RS02870 79ac0c52cf7d42c00870da09e5dedc16 247 Pfam PF03932 CutC family 4 205 4.5E-84 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VPUCM_RS02870 79ac0c52cf7d42c00870da09e5dedc16 247 SUPERFAMILY SSF110395 4 247 3.01E-74 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VPUCM_RS02870 79ac0c52cf7d42c00870da09e5dedc16 247 Gene3D G3DSA:3.20.20.380 4 246 5.5E-91 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 Pfam PF02311 AraC-like ligand binding domain 15 133 6.0E-20 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 PANTHER PTHR11019 1 263 1.4E-96 T 22-04-2016 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 SMART SM00342 182 264 2.4E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 SUPERFAMILY SSF46689 167 215 8.51E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 PANTHER PTHR11019:SF94 1 263 1.4E-96 T 22-04-2016 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 Pfam PF12833 Helix-turn-helix domain 192 264 1.2E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 Gene3D G3DSA:1.10.10.60 220 263 1.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 SUPERFAMILY SSF51215 23 133 1.19E-17 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 Gene3D G3DSA:2.60.120.280 17 134 8.6E-13 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 Gene3D G3DSA:1.10.10.60 165 219 1.5E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 SUPERFAMILY SSF46689 218 263 1.12E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 1.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS15690 c07dc0cfcb498a2ca55ed2a17f377abf 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 1.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 120 131 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 SUPERFAMILY SSF54211 28 183 6.38E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 Pfam PF00288 GHMP kinases N terminal domain 114 180 3.8E-13 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 PRINTS PR00958 Homoserine kinase signature 127 142 1.4E-14 T 22-04-2016 VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 PRINTS PR00958 Homoserine kinase signature 34 49 1.4E-14 T 22-04-2016 VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 PRINTS PR00958 Homoserine kinase signature 167 180 1.4E-14 T 22-04-2016 VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 PANTHER PTHR20861 10 192 9.4E-60 T 22-04-2016 VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 PANTHER PTHR20861:SF1 10 192 9.4E-60 T 22-04-2016 VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 Gene3D G3DSA:3.30.230.10 27 187 2.7E-44 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS18560 eed525429aed181ccad9072de05b4e60 192 TIGRFAM TIGR00191 thrB: homoserine kinase 27 188 1.8E-50 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VPUCM_RS14425 5af69e0fce5cc2250e567b08b8a55490 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 4.4E-62 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14425 5af69e0fce5cc2250e567b08b8a55490 263 Hamap MF_00082_B Acetylglutamate kinase [argB]. 5 262 26.246 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14425 5af69e0fce5cc2250e567b08b8a55490 263 SUPERFAMILY SSF53633 9 261 1.06E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14425 5af69e0fce5cc2250e567b08b8a55490 263 PIRSF PIRSF000728 1 263 2.2E-69 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14425 5af69e0fce5cc2250e567b08b8a55490 263 Gene3D G3DSA:3.40.1160.10 7 260 2.5E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14425 5af69e0fce5cc2250e567b08b8a55490 263 Pfam PF00696 Amino acid kinase family 9 238 2.4E-35 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS14425 5af69e0fce5cc2250e567b08b8a55490 263 PANTHER PTHR23342 8 262 2.2E-82 T 22-04-2016 VPUCM_RS02665 20e9c210ad7052168cc8aff80a2487ac 370 Gene3D G3DSA:3.30.420.40 6 197 1.7E-72 T 22-04-2016 VPUCM_RS02665 20e9c210ad7052168cc8aff80a2487ac 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 6 368 7.7E-167 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VPUCM_RS02665 20e9c210ad7052168cc8aff80a2487ac 370 PANTHER PTHR30605:SF2 1 370 1.4E-200 T 22-04-2016 VPUCM_RS02665 20e9c210ad7052168cc8aff80a2487ac 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.822 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VPUCM_RS02665 20e9c210ad7052168cc8aff80a2487ac 370 PANTHER PTHR30605 1 370 1.4E-200 T 22-04-2016 VPUCM_RS02665 20e9c210ad7052168cc8aff80a2487ac 370 SUPERFAMILY SSF53067 6 40 8.64E-28 T 22-04-2016 VPUCM_RS02665 20e9c210ad7052168cc8aff80a2487ac 370 SUPERFAMILY SSF53067 67 112 8.64E-28 T 22-04-2016 VPUCM_RS02665 20e9c210ad7052168cc8aff80a2487ac 370 SUPERFAMILY SSF53067 144 343 8.64E-28 T 22-04-2016 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.2E-105 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 PANTHER PTHR20854 1 273 5.1E-88 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 PANTHER PTHR20854:SF5 1 273 5.1E-88 T 22-04-2016 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 Gene3D G3DSA:3.30.540.10 6 160 1.5E-44 T 22-04-2016 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 9.0E-6 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 9.0E-6 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 9.0E-6 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 Gene3D G3DSA:3.40.190.80 161 263 9.6E-36 T 22-04-2016 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 SUPERFAMILY SSF56655 6 272 5.24E-77 T 22-04-2016 VPUCM_RS00720 8a58897d474185e0daf23e60dc018ab0 275 Pfam PF00459 Inositol monophosphatase family 7 253 3.0E-51 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS03135 7b6b96a9bf2b63f4725285c064b618f5 332 SUPERFAMILY SSF56784 67 318 2.1E-23 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS03135 7b6b96a9bf2b63f4725285c064b618f5 332 Pfam PF12710 haloacid dehalogenase-like hydrolase 69 270 1.9E-18 T 22-04-2016 VPUCM_RS03135 7b6b96a9bf2b63f4725285c064b618f5 332 Gene3D G3DSA:3.40.50.1000 162 303 3.1E-14 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS03135 7b6b96a9bf2b63f4725285c064b618f5 332 Gene3D G3DSA:3.40.50.1000 67 82 3.1E-14 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS11425 9a5fd5927a10f26d1a56178a85c199ca 262 PRINTS PR01805 VacJ lipoprotein signature 153 170 4.6E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VPUCM_RS11425 9a5fd5927a10f26d1a56178a85c199ca 262 PRINTS PR01805 VacJ lipoprotein signature 65 81 4.6E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VPUCM_RS11425 9a5fd5927a10f26d1a56178a85c199ca 262 PRINTS PR01805 VacJ lipoprotein signature 47 60 4.6E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VPUCM_RS11425 9a5fd5927a10f26d1a56178a85c199ca 262 PRINTS PR01805 VacJ lipoprotein signature 116 133 4.6E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VPUCM_RS11425 9a5fd5927a10f26d1a56178a85c199ca 262 PANTHER PTHR30035 26 261 1.1E-96 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VPUCM_RS11425 9a5fd5927a10f26d1a56178a85c199ca 262 PANTHER PTHR30035:SF3 26 261 1.1E-96 T 22-04-2016 VPUCM_RS11425 9a5fd5927a10f26d1a56178a85c199ca 262 Pfam PF04333 MlaA lipoprotein 46 237 1.4E-62 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VPUCM_RS03225 ecd393b3ebdd13619bd47d335e71a5d4 322 SMART SM00382 56 220 0.0034 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03225 ecd393b3ebdd13619bd47d335e71a5d4 322 PANTHER PTHR37291:SF1 117 309 8.0E-36 T 22-04-2016 VPUCM_RS03225 ecd393b3ebdd13619bd47d335e71a5d4 322 SUPERFAMILY SSF52540 47 231 1.77E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03225 ecd393b3ebdd13619bd47d335e71a5d4 322 Gene3D G3DSA:3.40.50.300 46 215 1.4E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03225 ecd393b3ebdd13619bd47d335e71a5d4 322 Pfam PF07728 AAA domain (dynein-related subfamily) 59 214 4.8E-25 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VPUCM_RS03225 ecd393b3ebdd13619bd47d335e71a5d4 322 PANTHER PTHR37291 117 309 8.0E-36 T 22-04-2016 VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 PANTHER PTHR30308:SF2 2 161 3.9E-77 T 22-04-2016 VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 PANTHER PTHR30308 2 161 3.9E-77 T 22-04-2016 VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.3E-52 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 Gene3D G3DSA:2.40.280.10 14 134 1.1E-47 T 22-04-2016 IPR023620 Small protein B VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 SUPERFAMILY SSF74982 8 139 4.97E-48 T 22-04-2016 IPR023620 Small protein B VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 Pfam PF01668 SmpB protein 14 77 7.0E-28 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.072 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VPUCM_RS03255 8a22ca959255df171507f7b351d580a9 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-61 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VPUCM_RS10655 edd70ee568986a27697a74cbe905cc4b 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 0.0 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VPUCM_RS10655 edd70ee568986a27697a74cbe905cc4b 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VPUCM_RS10655 edd70ee568986a27697a74cbe905cc4b 528 PANTHER PTHR10283 12 168 1.2E-278 T 22-04-2016 VPUCM_RS10655 edd70ee568986a27697a74cbe905cc4b 528 PANTHER PTHR10283 197 513 1.2E-278 T 22-04-2016 VPUCM_RS10655 edd70ee568986a27697a74cbe905cc4b 528 PANTHER PTHR10283:SF93 12 168 1.2E-278 T 22-04-2016 VPUCM_RS10655 edd70ee568986a27697a74cbe905cc4b 528 PANTHER PTHR10283:SF93 197 513 1.2E-278 T 22-04-2016 VPUCM_RS10655 edd70ee568986a27697a74cbe905cc4b 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 375.696 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 Pfam PF03466 LysR substrate binding domain 108 298 2.7E-25 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 PANTHER PTHR30118:SF8 9 306 3.2E-69 T 22-04-2016 VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 PANTHER PTHR30118 9 306 3.2E-69 T 22-04-2016 VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 Gene3D G3DSA:1.10.10.10 14 94 1.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 1.8E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 Gene3D G3DSA:3.40.190.10 185 280 6.0E-19 T 22-04-2016 VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 Gene3D G3DSA:3.40.190.10 285 311 2.4E-25 T 22-04-2016 VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 Gene3D G3DSA:3.40.190.10 102 184 2.4E-25 T 22-04-2016 VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 SUPERFAMILY SSF53850 102 307 7.78E-37 T 22-04-2016 VPUCM_RS04200 7b0b16ad15353bc3b6071a601477c2c9 314 SUPERFAMILY SSF46785 15 93 4.42E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01310 de17863481778c879af10c1abcec3f3c 282 Pfam PF00535 Glycosyl transferase family 2 19 149 6.0E-9 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS01310 de17863481778c879af10c1abcec3f3c 282 PANTHER PTHR22916 3 143 1.3E-23 T 22-04-2016 VPUCM_RS01310 de17863481778c879af10c1abcec3f3c 282 PANTHER PTHR22916 162 246 1.3E-23 T 22-04-2016 VPUCM_RS01310 de17863481778c879af10c1abcec3f3c 282 Gene3D G3DSA:3.90.550.10 19 238 6.3E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01310 de17863481778c879af10c1abcec3f3c 282 SUPERFAMILY SSF53448 10 242 2.94E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01310 de17863481778c879af10c1abcec3f3c 282 PANTHER PTHR22916:SF16 3 143 1.3E-23 T 22-04-2016 VPUCM_RS01310 de17863481778c879af10c1abcec3f3c 282 PANTHER PTHR22916:SF16 162 246 1.3E-23 T 22-04-2016 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SUPERFAMILY SSF54106 409 453 1.18E-9 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SMART SM00646 230 389 7.5E-61 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SUPERFAMILY SSF54106 472 516 1.44E-9 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Pfam PF11741 AMIN domain 34 135 8.1E-16 T 22-04-2016 IPR021731 AMIN domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 PANTHER PTHR30404:SF1 1 422 1.8E-166 T 22-04-2016 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 389 8.3E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Pfam PF01476 LysM domain 411 453 1.0E-11 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Pfam PF01476 LysM domain 527 569 6.8E-13 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Pfam PF01476 LysM domain 474 515 5.5E-11 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 PANTHER PTHR30404 1 422 1.8E-166 T 22-04-2016 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Gene3D G3DSA:3.10.350.10 526 570 6.3E-16 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SMART SM00257 410 453 3.6E-14 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SMART SM00257 473 516 7.4E-14 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SMART SM00257 526 569 1.5E-12 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Gene3D G3DSA:3.40.630.40 167 265 1.2E-55 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Gene3D G3DSA:3.40.630.40 317 393 1.2E-55 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SUPERFAMILY SSF54106 526 569 6.15E-10 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SUPERFAMILY SSF53187 316 392 3.01E-52 T 22-04-2016 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 SUPERFAMILY SSF53187 167 264 3.01E-52 T 22-04-2016 VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Gene3D G3DSA:3.10.350.10 408 454 2.7E-14 T 22-04-2016 IPR018392 LysM domain VPUCM_RS14705 fd6d6d9eb4659bbb4be19d6637f0c6f7 571 Gene3D G3DSA:3.10.350.10 471 516 1.1E-14 T 22-04-2016 IPR018392 LysM domain VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 PANTHER PTHR32071:SF11 1 445 2.5E-257 T 22-04-2016 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 Gene3D G3DSA:3.40.50.2300 2 127 5.1E-34 T 22-04-2016 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 Pfam PF00158 Sigma-54 interaction domain 144 310 2.2E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 SUPERFAMILY SSF52172 2 188 8.82E-39 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 SMART SM00448 2 114 2.4E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 SUPERFAMILY SSF46689 391 440 1.05E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 SUPERFAMILY SSF52540 144 373 1.02E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 7.3E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 SMART SM00382 164 307 3.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 Gene3D G3DSA:1.10.8.60 317 366 9.4E-23 T 22-04-2016 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 Gene3D G3DSA:3.40.50.300 143 316 5.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 PANTHER PTHR32071 1 445 2.5E-257 T 22-04-2016 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 Pfam PF00072 Response regulator receiver domain 4 114 5.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS05105 77a540e853b80fb3b851240fba2a4fb5 445 Gene3D G3DSA:1.10.10.60 367 440 2.3E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS00395 94f9217528520f07ca65a7072758c812 292 PANTHER PTHR22911 3 277 2.1E-60 T 22-04-2016 VPUCM_RS00395 94f9217528520f07ca65a7072758c812 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 4.0E-71 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VPUCM_RS00395 94f9217528520f07ca65a7072758c812 292 PANTHER PTHR22911:SF27 3 277 2.1E-60 T 22-04-2016 VPUCM_RS00395 94f9217528520f07ca65a7072758c812 292 Pfam PF00892 EamA-like transporter family 138 275 5.9E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS00395 94f9217528520f07ca65a7072758c812 292 SUPERFAMILY SSF103481 35 131 3.4E-5 T 22-04-2016 VPUCM_RS00395 94f9217528520f07ca65a7072758c812 292 SUPERFAMILY SSF103481 184 276 1.57E-5 T 22-04-2016 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 PANTHER PTHR11075:SF9 1 358 6.9E-181 T 22-04-2016 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 Pfam PF03462 PCRF domain 13 205 1.6E-77 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 Pfam PF00472 RF-1 domain 218 323 1.3E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 SUPERFAMILY SSF75620 12 355 7.72E-138 T 22-04-2016 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 6.2E-171 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 PANTHER PTHR11075 1 358 6.9E-181 T 22-04-2016 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 Gene3D G3DSA:3.30.160.20 217 291 1.2E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.795 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 Gene3D G3DSA:1.20.58.410 7 94 1.5E-25 T 22-04-2016 VPUCM_RS12295 8aad394f5852f3c763337468458cfe79 362 SMART SM00937 67 180 8.8E-68 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VPUCM_RS14505 b7227f3693964d754792ef9adff4e7f9 91 Gene3D G3DSA:3.40.1260.10 1 88 2.6E-22 T 22-04-2016 IPR027396 DsrEFH-like VPUCM_RS14505 b7227f3693964d754792ef9adff4e7f9 91 SUPERFAMILY SSF75169 1 90 7.07E-24 T 22-04-2016 IPR027396 DsrEFH-like VPUCM_RS14505 b7227f3693964d754792ef9adff4e7f9 91 PANTHER PTHR37526 1 90 8.0E-20 T 22-04-2016 VPUCM_RS14505 b7227f3693964d754792ef9adff4e7f9 91 Pfam PF04077 DsrH like protein 10 86 6.9E-24 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VPUCM_RS14505 b7227f3693964d754792ef9adff4e7f9 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 6.9E-28 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 Gene3D G3DSA:3.40.50.2030 237 382 4.3E-68 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 PANTHER PTHR30109 1 551 5.4E-282 T 22-04-2016 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 Gene3D G3DSA:3.40.50.2030 383 550 3.2E-70 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 Gene3D G3DSA:1.20.1270.20 141 161 4.8E-35 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 Gene3D G3DSA:1.20.1270.20 1 109 4.8E-35 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 Gene3D G3DSA:1.20.1270.20 162 235 2.5E-24 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 SUPERFAMILY SSF56821 1 551 4.84E-196 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 2.4E-163 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 PANTHER PTHR30109:SF0 1 551 5.4E-282 T 22-04-2016 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.256 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 PIRSF PIRSF000076 1 553 1.1E-244 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS10075 18e05cbad88820baf6c91974602cca77 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.9E-226 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VPUCM_RS03455 a6cb207ef3920b61253f05d448ead45f 448 PANTHER PTHR11206 1 438 1.6E-122 T 22-04-2016 VPUCM_RS03455 a6cb207ef3920b61253f05d448ead45f 448 Pfam PF01554 MatE 240 398 7.2E-15 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS03455 a6cb207ef3920b61253f05d448ead45f 448 Pfam PF01554 MatE 15 176 3.6E-21 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS03455 a6cb207ef3920b61253f05d448ead45f 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 1.1E-48 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS03455 a6cb207ef3920b61253f05d448ead45f 448 PANTHER PTHR11206:SF132 1 438 1.6E-122 T 22-04-2016 VPUCM_RS03455 a6cb207ef3920b61253f05d448ead45f 448 PIRSF PIRSF006603 1 438 7.7E-67 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 1.0E-48 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 SMART SM00100 17 134 2.2E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 PANTHER PTHR11911:SF110 134 453 5.6E-41 T 22-04-2016 VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 SUPERFAMILY SSF51206 7 135 8.25E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 PANTHER PTHR11911 134 453 5.6E-41 T 22-04-2016 VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 SMART SM00116 159 215 9.1E-5 T 22-04-2016 IPR000644 CBS domain VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 SMART SM00116 232 279 1.6E-4 T 22-04-2016 IPR000644 CBS domain VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 SUPERFAMILY SSF54631 146 278 1.77E-29 T 22-04-2016 VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 2.6E-44 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 Gene3D G3DSA:3.10.580.10 151 280 7.1E-32 T 22-04-2016 VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.0E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF00571 CBS domain 153 211 6.9E-10 T 22-04-2016 IPR000644 CBS domain VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF00571 CBS domain 225 277 4.1E-11 T 22-04-2016 IPR000644 CBS domain VPUCM_RS08970 9e99f8158c1773c899da9cf65fa043d3 626 Gene3D G3DSA:2.60.120.10 7 134 1.1E-22 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 SUPERFAMILY SSF88946 27 109 5.49E-21 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 Pfam PF04542 Sigma-70 region 2 33 99 2.2E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 PANTHER PTHR30173 5 182 6.9E-52 T 22-04-2016 VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 PANTHER PTHR30173:SF6 5 182 6.9E-52 T 22-04-2016 VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 SUPERFAMILY SSF88659 120 180 2.62E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 Pfam PF08281 Sigma-70, region 4 123 175 1.1E-9 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 Gene3D G3DSA:1.10.10.10 122 180 7.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 2.1E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS11405 00714bac76df102ea4b05d91c85566ae 191 Gene3D G3DSA:1.10.1740.10 26 121 5.8E-23 T 22-04-2016 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 SUPERFAMILY SSF48452 296 388 1.04E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 SUPERFAMILY SSF48452 74 190 1.04E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 SMART SM00028 74 107 7.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 SMART SM00028 151 184 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 PANTHER PTHR23083 81 255 3.5E-15 T 22-04-2016 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 PANTHER PTHR23083 293 388 3.5E-15 T 22-04-2016 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 Pfam PF13181 Tetratricopeptide repeat 151 183 0.0036 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 Gene3D G3DSA:1.25.40.10 263 387 7.2E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 Gene3D G3DSA:1.25.40.10 127 249 2.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS00815 1a19130240838d0bc005a26ab7592290 407 Gene3D G3DSA:1.25.40.10 45 126 2.7E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS10175 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 SUPERFAMILY SSF161098 89 276 7.98E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10175 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 PANTHER PTHR30465 7 295 7.5E-159 T 22-04-2016 VPUCM_RS10175 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 1.0E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10175 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.3E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VPUCM_RS10175 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Gene3D G3DSA:1.10.3720.10 89 291 2.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10175 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 PANTHER PTHR30465:SF49 7 295 7.5E-159 T 22-04-2016 VPUCM_RS01125 d9b7f2d85c0ca658c9a21a11bd91f08f 218 Pfam PF01583 Adenylylsulphate kinase 36 191 5.4E-75 T 22-04-2016 VPUCM_RS01125 d9b7f2d85c0ca658c9a21a11bd91f08f 218 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 35 207 38.827 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VPUCM_RS01125 d9b7f2d85c0ca658c9a21a11bd91f08f 218 Gene3D G3DSA:3.40.50.300 16 210 1.2E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01125 d9b7f2d85c0ca658c9a21a11bd91f08f 218 PANTHER PTHR11055 17 211 1.9E-127 T 22-04-2016 VPUCM_RS01125 d9b7f2d85c0ca658c9a21a11bd91f08f 218 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 19 203 1.7E-85 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VPUCM_RS01125 d9b7f2d85c0ca658c9a21a11bd91f08f 218 SUPERFAMILY SSF52540 30 206 2.55E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 56 366 54.16 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 Pfam PF05971 Protein of unknown function (DUF890) 55 364 6.1E-129 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 SUPERFAMILY SSF53335 94 363 1.51E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 Gene3D G3DSA:3.40.50.150 148 352 1.5E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 PIRSF PIRSF029038 45 375 4.5E-162 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 PANTHER PTHR13393 43 259 5.3E-122 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 PANTHER PTHR13393 277 368 5.3E-122 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 PANTHER PTHR13393:SF0 43 259 5.3E-122 T 22-04-2016 VPUCM_RS09435 ee199647c44e2390bce0bd77d2a1d3d8 375 PANTHER PTHR13393:SF0 277 368 5.3E-122 T 22-04-2016 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 Pfam PF00534 Glycosyl transferases group 1 247 401 2.3E-10 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 SUPERFAMILY SSF53756 53 404 2.09E-16 T 22-04-2016 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 PANTHER PTHR23417 1 112 9.8E-118 T 22-04-2016 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 PANTHER PTHR23417 191 417 9.8E-118 T 22-04-2016 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 PANTHER PTHR23417 131 141 9.8E-118 T 22-04-2016 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 2.9E-62 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 PANTHER PTHR23417:SF2 1 112 9.8E-118 T 22-04-2016 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 PANTHER PTHR23417:SF2 191 417 9.8E-118 T 22-04-2016 VPUCM_RS01065 7dae2254fec37c48ab311a919bc2e10f 421 PANTHER PTHR23417:SF2 131 141 9.8E-118 T 22-04-2016 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 68 313 5.3E-28 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 SUPERFAMILY SSF47413 9 67 2.15E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 SUPERFAMILY SSF53822 67 321 1.69E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 2.8E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 PANTHER PTHR30146:SF2 9 335 9.7E-166 T 22-04-2016 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 Gene3D G3DSA:3.40.50.2300 66 177 1.9E-37 T 22-04-2016 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 PANTHER PTHR30146 9 335 9.7E-166 T 22-04-2016 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 SMART SM00354 9 79 2.6E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 Gene3D G3DSA:3.40.50.2300 178 335 3.0E-42 T 22-04-2016 VPUCM_RS00310 9c6e2d6dc585af8ff52263ff409c3c99 335 Gene3D G3DSA:1.10.260.40 9 64 4.5E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS14175 81e3f33023d4c7bec2e5878c2c798bad 290 PANTHER PTHR22572 4 278 6.9E-101 T 22-04-2016 VPUCM_RS14175 81e3f33023d4c7bec2e5878c2c798bad 290 PANTHER PTHR22572:SF14 4 278 6.9E-101 T 22-04-2016 VPUCM_RS14175 81e3f33023d4c7bec2e5878c2c798bad 290 Pfam PF00483 Nucleotidyl transferase 9 265 7.1E-32 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VPUCM_RS14175 81e3f33023d4c7bec2e5878c2c798bad 290 SUPERFAMILY SSF53448 2 271 2.5E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS14175 81e3f33023d4c7bec2e5878c2c798bad 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.5E-125 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VPUCM_RS14175 81e3f33023d4c7bec2e5878c2c798bad 290 Gene3D G3DSA:3.90.550.10 3 268 1.8E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 PANTHER PTHR30258 1 571 0.0 T 22-04-2016 VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 Gene3D G3DSA:3.30.450.90 158 286 3.6E-46 T 22-04-2016 VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 SUPERFAMILY SSF160246 3 145 4.18E-40 T 22-04-2016 VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 PANTHER PTHR30258:SF11 1 571 0.0 T 22-04-2016 VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 Pfam PF00437 Type II/IV secretion system protein 191 453 2.0E-74 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 SMART SM00382 314 435 5.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 Gene3D G3DSA:3.40.50.300 292 559 2.5E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 SUPERFAMILY SSF52540 181 558 9.66E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14125 c80d39e3f22d911486160b34690b8aa3 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 9.9E-23 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 PANTHER PTHR30371 5 246 3.8E-112 T 22-04-2016 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 241 18.332 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.3E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.3E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.3E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.3E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 ProSitePatterns PS01218 TatC family signature. 155 174 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 PANTHER PTHR30371:SF0 5 246 3.8E-112 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.3E-76 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VPUCM_RS00520 44c5601353e3ee3bae0119b1322ad3b7 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 1.0E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VPUCM_RS08180 5c88ba7b668f9952b98fc48495fa99ab 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VPUCM_RS08180 5c88ba7b668f9952b98fc48495fa99ab 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 1.9E-115 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VPUCM_RS08180 5c88ba7b668f9952b98fc48495fa99ab 475 PANTHER PTHR10422 3 466 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VPUCM_RS08180 5c88ba7b668f9952b98fc48495fa99ab 475 SUPERFAMILY SSF81442 11 465 3.92E-122 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VPUCM_RS08180 5c88ba7b668f9952b98fc48495fa99ab 475 Gene3D G3DSA:1.20.210.10 10 466 1.2E-70 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VPUCM_RS08180 5c88ba7b668f9952b98fc48495fa99ab 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 1.5E-230 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VPUCM_RS08180 5c88ba7b668f9952b98fc48495fa99ab 475 PANTHER PTHR10422:SF21 3 466 0.0 T 22-04-2016 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 PANTHER PTHR11063:SF8 1 416 1.2E-174 T 22-04-2016 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 SUPERFAMILY SSF53720 3 408 3.4E-108 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 Gene3D G3DSA:3.40.309.10 224 373 2.1E-32 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 Gene3D G3DSA:3.40.605.10 3 221 3.1E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 Gene3D G3DSA:3.40.605.10 374 413 3.1E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 Pfam PF00171 Aldehyde dehydrogenase family 8 280 9.6E-15 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 8.1E-166 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.032 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 PANTHER PTHR11063 1 416 1.2E-174 T 22-04-2016 VPUCM_RS12720 3e5757c59850ad9b1ee85b9dc7e48c60 416 PIRSF PIRSF000151 1 416 2.0E-163 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 PANTHER PTHR30332 105 690 5.2E-63 T 22-04-2016 VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 Pfam PF03958 Bacterial type II/III secretion system short domain 347 452 8.1E-10 T 22-04-2016 IPR005644 NolW-like VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 Pfam PF00263 Bacterial type II and III secretion system protein 514 673 4.5E-49 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 PANTHER PTHR30332:SF0 105 690 5.2E-63 T 22-04-2016 VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 661 675 4.7E-17 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 638 656 4.7E-17 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 462 4.7E-17 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 544 554 4.7E-17 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS01190 cac0b9ce85785a17db831b0c74b288a0 710 PRINTS PR00811 Bacterial general secretion pathway protein D signature 509 533 4.7E-17 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS11720 e0b93b897e1b0a8faa574a025af5c273 156 Pfam PF00578 AhpC/TSA family 7 134 1.5E-35 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VPUCM_RS11720 e0b93b897e1b0a8faa574a025af5c273 156 Gene3D G3DSA:3.40.30.10 2 154 3.9E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11720 e0b93b897e1b0a8faa574a025af5c273 156 PANTHER PTHR10681 1 136 3.6E-48 T 22-04-2016 VPUCM_RS11720 e0b93b897e1b0a8faa574a025af5c273 156 PIRSF PIRSF000239 1 147 3.3E-18 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 VPUCM_RS11720 e0b93b897e1b0a8faa574a025af5c273 156 SUPERFAMILY SSF52833 4 154 6.84E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 7.3E-37 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 7.3E-37 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 7.3E-37 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 7.3E-37 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PANTHER PTHR30012:SF6 2 404 5.9E-247 T 22-04-2016 VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PANTHER PTHR30012 2 404 5.9E-247 T 22-04-2016 VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 1.5E-153 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.1E-34 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS00675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.7E-24 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS05020 2d68c5d8cd7ca5aed16c0b4d9c4821de 255 PANTHER PTHR10434 70 182 3.9E-17 T 22-04-2016 VPUCM_RS05020 2d68c5d8cd7ca5aed16c0b4d9c4821de 255 SUPERFAMILY SSF69593 69 249 3.79E-23 T 22-04-2016 VPUCM_RS05020 2d68c5d8cd7ca5aed16c0b4d9c4821de 255 Gene3D G3DSA:3.40.1130.10 77 249 3.7E-7 T 22-04-2016 VPUCM_RS05020 2d68c5d8cd7ca5aed16c0b4d9c4821de 255 SMART SM00563 86 196 6.6E-13 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS05020 2d68c5d8cd7ca5aed16c0b4d9c4821de 255 Pfam PF01553 Acyltransferase 75 189 9.7E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS07655 d2ee5cb7cdac1d8017d350fbb1850b88 94 SUPERFAMILY SSF54909 4 80 1.98E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS07655 d2ee5cb7cdac1d8017d350fbb1850b88 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 12 68 1.2E-5 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VPUCM_RS07655 d2ee5cb7cdac1d8017d350fbb1850b88 94 Gene3D G3DSA:3.30.70.900 3 68 2.8E-12 T 22-04-2016 VPUCM_RS13880 2cfc88879c4429c57033b2e18da1cce7 140 PIRSF PIRSF018193 8 140 1.9E-58 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B VPUCM_RS13880 2cfc88879c4429c57033b2e18da1cce7 140 SUPERFAMILY SSF89946 8 126 4.18E-39 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VPUCM_RS13880 2cfc88879c4429c57033b2e18da1cce7 140 Gene3D G3DSA:3.30.70.970 9 129 2.0E-50 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VPUCM_RS13880 2cfc88879c4429c57033b2e18da1cce7 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.739 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B VPUCM_RS13880 2cfc88879c4429c57033b2e18da1cce7 140 Pfam PF06877 Regulator of ribonuclease activity B 19 120 1.0E-33 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 2.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 PANTHER PTHR30579 1 296 2.6E-133 T 22-04-2016 VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 PANTHER PTHR30579:SF2 1 296 2.6E-133 T 22-04-2016 VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 SUPERFAMILY SSF46785 4 112 9.72E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 SUPERFAMILY SSF53850 94 293 3.62E-22 T 22-04-2016 VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 Gene3D G3DSA:3.40.190.10 92 198 4.9E-38 T 22-04-2016 VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.734 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 Gene3D G3DSA:1.10.10.10 4 84 7.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 Pfam PF03466 LysR substrate binding domain 95 273 7.4E-15 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS13420 f87d4deef3a826864e9a281d7f108fc2 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 3.9E-105 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 Gene3D G3DSA:3.40.50.720 233 376 1.0E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 Gene3D G3DSA:3.40.50.720 1 152 4.7E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 SUPERFAMILY SSF51735 1 151 4.26E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 Pfam PF02254 TrkA-N domain 3 123 3.2E-29 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 Pfam PF02254 TrkA-N domain 235 350 4.0E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PANTHER PTHR13789:SF225 416 440 1.0E-83 T 22-04-2016 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PANTHER PTHR13789:SF225 1 170 1.0E-83 T 22-04-2016 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 SUPERFAMILY SSF116726 366 437 5.75E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PANTHER PTHR13789 416 440 1.0E-83 T 22-04-2016 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PANTHER PTHR13789 1 170 1.0E-83 T 22-04-2016 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 SUPERFAMILY SSF51735 232 376 1.79E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 9.3E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 9.3E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 9.3E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 9.3E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 9.3E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 Pfam PF02080 TrkA-C domain 391 449 5.8E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 Pfam PF02080 TrkA-C domain 156 225 4.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS15895 38b17a91cbedb7f20774cc219dd4a190 458 Gene3D G3DSA:3.30.70.1450 391 436 7.4E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 Gene3D G3DSA:2.30.30.30 3 92 1.6E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 PANTHER PTHR12903 4 101 3.9E-47 T 22-04-2016 VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 5.8E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 Pfam PF00467 KOW motif 8 37 8.0E-6 T 22-04-2016 IPR005824 KOW VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 SMART SM00739 4 31 3.4E-4 T 22-04-2016 IPR005824 KOW VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 SUPERFAMILY SSF50104 4 101 5.16E-34 T 22-04-2016 IPR008991 Translation protein SH3-like domain VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.041 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01485 c79b300d389d473d91e755b7152d36e5 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.7E-40 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00425 a974353c5bc30f87b3de9109a92efdb4 183 SMART SM00749 37 100 42.0 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VPUCM_RS00425 a974353c5bc30f87b3de9109a92efdb4 183 SMART SM00749 120 183 9.8E-6 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VPUCM_RS00425 a974353c5bc30f87b3de9109a92efdb4 183 Pfam PF04972 BON domain 33 99 9.0E-18 T 22-04-2016 IPR007055 BON domain VPUCM_RS00425 a974353c5bc30f87b3de9109a92efdb4 183 Pfam PF04972 BON domain 115 182 2.2E-16 T 22-04-2016 IPR007055 BON domain VPUCM_RS00425 a974353c5bc30f87b3de9109a92efdb4 183 PANTHER PTHR34606 5 183 1.3E-18 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 209 288 4.1E-14 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 585 671 1.4E-15 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 488 576 4.4E-15 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 95 181 6.0E-15 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 297 378 1.4E-13 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 393 470 4.2E-12 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 PANTHER PTHR33619:SF1 493 656 9.2E-34 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 PANTHER PTHR33619:SF1 1 92 9.2E-34 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 PANTHER PTHR33619:SF1 201 470 9.2E-34 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.30.1950.10 32 91 1.6E-9 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 PANTHER PTHR33619 493 656 9.2E-34 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 PANTHER PTHR33619 1 92 9.2E-34 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 PANTHER PTHR33619 201 470 9.2E-34 T 22-04-2016 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 27 91 3.0E-10 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 105 151 2.6E-4 T 22-04-2016 IPR019554 Soluble ligand binding domain VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 590 633 4.0E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 299 351 1.1E-11 T 22-04-2016 IPR019554 Soluble ligand binding domain VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 396 446 8.6E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 495 538 2.4E-4 T 22-04-2016 IPR019554 Soluble ligand binding domain VPUCM_RS07540 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 212 253 8.2E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 Gene3D G3DSA:3.30.1300.30 26 98 1.6E-47 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 Gene3D G3DSA:3.30.1300.30 286 326 1.6E-47 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 SUPERFAMILY SSF54523 36 100 1.88E-36 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 SUPERFAMILY SSF54523 285 325 1.88E-36 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 1.8E-88 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 Gene3D G3DSA:1.10.40.60 99 214 1.1E-37 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 PANTHER PTHR38831:SF1 1 336 1.6E-69 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 Gene3D G3DSA:1.10.40.60 216 284 4.6E-27 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 PANTHER PTHR38831 1 336 1.6E-69 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 SUPERFAMILY SSF158544 101 213 9.42E-33 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 SUPERFAMILY SSF158544 215 282 1.62E-19 T 22-04-2016 VPUCM_RS00700 1a1213142d6659dc10a6270d8cc8d809 336 PIRSF PIRSF002786 1 328 1.9E-65 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 SUPERFAMILY SSF51998 4 757 3.89E-290 T 22-04-2016 VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 PIRSF PIRSF000379 5 758 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 PANTHER PTHR30191 1 758 0.0 T 22-04-2016 VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 Gene3D G3DSA:3.20.70.20 3 757 0.0 T 22-04-2016 VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 9.1E-207 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 VPUCM_RS05580 e43e551ddd233f7ae97620a55caf641f 758 PANTHER PTHR30191:SF0 1 758 0.0 T 22-04-2016 VPUCM_RS10825 7a371427c76d7e8441938a3d2ff908b2 196 SUPERFAMILY SSF159894 5 103 8.37E-31 T 22-04-2016 VPUCM_RS10825 7a371427c76d7e8441938a3d2ff908b2 196 Pfam PF04994 TfoX C-terminal domain 115 193 4.2E-31 T 22-04-2016 IPR007077 TfoX, C-terminal VPUCM_RS10825 7a371427c76d7e8441938a3d2ff908b2 196 PIRSF PIRSF028788 1 196 4.7E-48 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VPUCM_RS10825 7a371427c76d7e8441938a3d2ff908b2 196 Gene3D G3DSA:1.10.150.20 114 193 4.7E-29 T 22-04-2016 VPUCM_RS10825 7a371427c76d7e8441938a3d2ff908b2 196 PANTHER PTHR36121:SF1 1 193 1.1E-49 T 22-04-2016 VPUCM_RS10825 7a371427c76d7e8441938a3d2ff908b2 196 Gene3D G3DSA:3.30.1460.30 3 104 9.9E-37 T 22-04-2016 IPR007076 TfoX, N-terminal VPUCM_RS10825 7a371427c76d7e8441938a3d2ff908b2 196 Pfam PF04993 TfoX N-terminal domain 12 103 2.4E-30 T 22-04-2016 IPR007076 TfoX, N-terminal VPUCM_RS10825 7a371427c76d7e8441938a3d2ff908b2 196 PANTHER PTHR36121 1 193 1.1E-49 T 22-04-2016 VPUCM_RS13580 c86c2a85447d37730ca880edd2a23b32 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.1E-42 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VPUCM_RS13580 c86c2a85447d37730ca880edd2a23b32 90 PANTHER PTHR36965 2 90 7.8E-55 T 22-04-2016 VPUCM_RS13580 c86c2a85447d37730ca880edd2a23b32 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.452 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VPUCM_RS13580 c86c2a85447d37730ca880edd2a23b32 90 SUPERFAMILY SSF111148 1 89 8.89E-41 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VPUCM_RS13580 c86c2a85447d37730ca880edd2a23b32 90 Gene3D G3DSA:1.10.3880.10 1 90 1.5E-44 T 22-04-2016 VPUCM_RS13580 c86c2a85447d37730ca880edd2a23b32 90 PANTHER PTHR36965:SF1 2 90 7.8E-55 T 22-04-2016 VPUCM_RS13580 c86c2a85447d37730ca880edd2a23b32 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VPUCM_RS13580 c86c2a85447d37730ca880edd2a23b32 90 PIRSF PIRSF029827 1 90 1.0E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 Gene3D G3DSA:3.40.50.300 214 375 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 Pfam PF00271 Helicase conserved C-terminal domain 235 341 8.2E-31 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 SUPERFAMILY SSF52540 76 358 1.12E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 PANTHER PTHR24031:SF334 2 407 3.3E-200 T 22-04-2016 VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 Gene3D G3DSA:3.40.50.300 2 213 2.1E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 SMART SM00487 22 222 3.4E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 SMART SM00490 260 341 1.3E-31 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 3.2E-45 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 PANTHER PTHR24031 2 407 3.3E-200 T 22-04-2016 VPUCM_RS02485 5daae2d69a391b3b4e308b8bc4644751 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.707 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 PIRSF PIRSF004682 1 183 2.9E-63 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 PANTHER PTHR23133 1 183 1.5E-71 T 22-04-2016 VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 PANTHER PTHR23133:SF3 1 183 1.5E-71 T 22-04-2016 VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.7E-79 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 2.3E-35 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 Gene3D G3DSA:3.40.50.1000 3 181 1.4E-59 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-38 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 SUPERFAMILY SSF56784 4 182 2.13E-48 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS12570 fcdce20fb519505667b4454bbcbf9142 183 Pfam PF13242 HAD-hyrolase-like 107 176 1.2E-12 T 22-04-2016 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 SMART SM00382 490 657 6.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 SMART SM00382 209 354 3.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 SUPERFAMILY SSF52540 440 742 1.01E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 SMART SM01086 656 745 3.5E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 PANTHER PTHR11638 1 755 0.0 T 22-04-2016 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 PANTHER PTHR11638:SF111 1 755 0.0 T 22-04-2016 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 1.4E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 8.9E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 SUPERFAMILY SSF52540 171 428 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:1.10.1780.10 1 142 4.6E-44 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:3.40.50.300 445 665 6.8E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 1.7E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:1.10.8.60 355 439 8.5E-31 T 22-04-2016 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.8E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 SUPERFAMILY SSF81923 1 142 5.49E-59 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:3.40.50.300 172 352 1.9E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Gene3D G3DSA:1.10.8.60 666 752 3.5E-30 T 22-04-2016 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 VPUCM_RS10895 2d480638f2e1b7421486320082fc30c8 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 6.3E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 Gene3D G3DSA:3.40.47.10 1 160 1.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 4.7E-146 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 SUPERFAMILY SSF53901 3 315 7.49E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 PANTHER PTHR18919 26 316 2.0E-131 T 22-04-2016 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 8.5E-32 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 Gene3D G3DSA:3.40.47.10 161 315 1.0E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 PANTHER PTHR18919:SF109 26 316 2.0E-131 T 22-04-2016 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 9.5E-35 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VPUCM_RS10575 2093ebdc4c0232c24a2b4eae1fd352af 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.093 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 Gene3D G3DSA:3.30.420.150 130 304 7.3E-50 T 22-04-2016 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 SUPERFAMILY SSF53067 9 129 3.45E-36 T 22-04-2016 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 Gene3D G3DSA:3.30.420.40 6 129 1.6E-42 T 22-04-2016 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 7.1E-88 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 60.203 T 22-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 SUPERFAMILY SSF109604 309 495 7.85E-40 T 22-04-2016 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 PANTHER PTHR30005:SF2 1 492 9.4E-279 T 22-04-2016 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 PIRSF PIRSF001267 1 496 5.7E-177 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 PANTHER PTHR30005 1 492 9.4E-279 T 22-04-2016 VPUCM_RS15665 2cfef83eccb31640e425b7124d3f754c 497 SUPERFAMILY SSF53067 134 305 5.77E-43 T 22-04-2016 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 8.0E-126 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 SUPERFAMILY SSF88946 11 122 5.97E-40 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF04542 Sigma-70 region 2 53 122 2.9E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 1.1E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 1.1E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 234 246 1.1E-18 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 PANTHER PTHR30376 2 286 1.8E-123 T 22-04-2016 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF04545 Sigma-70, region 4 230 280 8.0E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.4E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.192 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 Gene3D G3DSA:1.10.10.10 226 280 2.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 SUPERFAMILY SSF88659 199 282 1.57E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 Gene3D G3DSA:1.10.601.10 12 122 4.1E-35 T 22-04-2016 VPUCM_RS15420 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 7.1E-9 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 SUPERFAMILY SSF88697 2 70 1.79E-17 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 PANTHER PTHR30027 1 243 3.3E-100 T 22-04-2016 VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 4.9E-86 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 Gene3D G3DSA:2.40.240.20 1 71 2.2E-26 T 22-04-2016 VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 Gene3D G3DSA:3.40.1280.10 75 242 1.1E-60 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 PANTHER PTHR30027:SF3 1 243 3.3E-100 T 22-04-2016 VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 PIRSF PIRSF015601 2 242 6.8E-57 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 Pfam PF04452 RNA methyltransferase 19 236 2.5E-75 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS13495 6ed424dcb3af51a40da5a3c5d4cd0059 243 SUPERFAMILY SSF75217 75 242 3.79E-53 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VPUCM_RS19215 f3474f00d18b34ba1d84c2e4b1f88d26 374 Pfam PF03553 Na+/H+ antiporter family 16 213 6.7E-13 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VPUCM_RS19215 f3474f00d18b34ba1d84c2e4b1f88d26 374 PANTHER PTHR33451 1 374 1.4E-160 T 22-04-2016 VPUCM_RS19215 f3474f00d18b34ba1d84c2e4b1f88d26 374 PANTHER PTHR33451:SF5 1 374 1.4E-160 T 22-04-2016 VPUCM_RS11035 33e96e1e55251c068f9c103350171629 247 Pfam PF00106 short chain dehydrogenase 27 211 4.6E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11035 33e96e1e55251c068f9c103350171629 247 Gene3D G3DSA:3.40.50.720 22 210 7.4E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11035 33e96e1e55251c068f9c103350171629 247 SUPERFAMILY SSF51735 20 210 1.98E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS09165 dced938a54e4caf6b314b3f574f4f9b7 213 SMART SM00863 166 208 5.3E-7 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VPUCM_RS09165 dced938a54e4caf6b314b3f574f4f9b7 213 Pfam PF01411 tRNA synthetases class II (A) 12 87 2.4E-9 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VPUCM_RS09165 dced938a54e4caf6b314b3f574f4f9b7 213 SUPERFAMILY SSF50447 1 83 1.73E-16 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS09165 dced938a54e4caf6b314b3f574f4f9b7 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 5.0E-6 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VPUCM_RS09165 dced938a54e4caf6b314b3f574f4f9b7 213 PANTHER PTHR11777 6 208 2.1E-35 T 22-04-2016 VPUCM_RS09165 dced938a54e4caf6b314b3f574f4f9b7 213 SUPERFAMILY SSF55186 84 210 2.49E-26 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.1E-198 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 SUPERFAMILY SSF52540 1 239 3.38E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 PANTHER PTHR24220:SF455 3 332 1.6E-177 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 SMART SM00382 30 235 7.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 SUPERFAMILY SSF55021 248 343 1.26E-25 T 22-04-2016 VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 Gene3D G3DSA:3.40.50.300 1 236 4.9E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 SMART SM00930 265 340 9.3E-27 T 22-04-2016 IPR018449 NIL domain VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 PANTHER PTHR24220 3 332 1.6E-177 T 22-04-2016 VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 Pfam PF00005 ABC transporter 21 169 1.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 Pfam PF09383 NIL domain 268 339 2.2E-20 T 22-04-2016 IPR018449 NIL domain VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 Gene3D G3DSA:3.30.70.260 237 343 5.5E-32 T 22-04-2016 VPUCM_RS12575 f03726e36f905d5ccae9c791685d04ca 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS12995 30ce1ce80f69be7ca60c44adf95fe6ed 204 SUPERFAMILY SSF46689 8 84 8.48E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS12995 30ce1ce80f69be7ca60c44adf95fe6ed 204 Gene3D G3DSA:1.10.357.10 16 198 3.5E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VPUCM_RS12995 30ce1ce80f69be7ca60c44adf95fe6ed 204 SUPERFAMILY SSF48498 89 197 1.11E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VPUCM_RS12995 30ce1ce80f69be7ca60c44adf95fe6ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS12995 30ce1ce80f69be7ca60c44adf95fe6ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS12995 30ce1ce80f69be7ca60c44adf95fe6ed 204 PANTHER PTHR30055 3 197 1.7E-23 T 22-04-2016 VPUCM_RS12995 30ce1ce80f69be7ca60c44adf95fe6ed 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 PANTHER PTHR10264 1 144 2.7E-105 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 PANTHER PTHR10264 174 322 2.7E-105 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 SMART SM00244 18 218 5.4E-49 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 SUPERFAMILY SSF117892 56 142 2.88E-21 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 SUPERFAMILY SSF117892 173 223 2.88E-21 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 1.1E-136 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 PANTHER PTHR10264:SF80 1 144 2.7E-105 T 22-04-2016 VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 PANTHER PTHR10264:SF80 174 322 2.7E-105 T 22-04-2016 VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 Pfam PF01145 SPFH domain / Band 7 family 22 236 8.3E-30 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS14675 16001a182864b63beba7f81d5107d9d2 326 PIRSF PIRSF005651 1 326 4.5E-96 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VPUCM_RS15395 b4d43ee20858265265d877a8e80fad77 284 PANTHER PTHR11048 1 281 3.8E-89 T 22-04-2016 VPUCM_RS15395 b4d43ee20858265265d877a8e80fad77 284 Pfam PF01040 UbiA prenyltransferase family 24 266 2.1E-69 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VPUCM_RS15395 b4d43ee20858265265d877a8e80fad77 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 7.8E-109 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 VPUCM_RS15395 b4d43ee20858265265d877a8e80fad77 284 PANTHER PTHR11048:SF7 1 281 3.8E-89 T 22-04-2016 VPUCM_RS15395 b4d43ee20858265265d877a8e80fad77 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.743 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 VPUCM_RS12800 bd6a23378c4e0d1f5f8e1ddc3eaf77bf 371 Gene3D G3DSA:2.40.50.100 175 208 5.2E-16 T 22-04-2016 VPUCM_RS12800 bd6a23378c4e0d1f5f8e1ddc3eaf77bf 371 Gene3D G3DSA:2.40.50.100 81 114 5.2E-16 T 22-04-2016 VPUCM_RS12800 bd6a23378c4e0d1f5f8e1ddc3eaf77bf 371 PANTHER PTHR30469 1 368 7.8E-75 T 22-04-2016 VPUCM_RS12800 bd6a23378c4e0d1f5f8e1ddc3eaf77bf 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 356 3.0E-48 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VPUCM_RS12800 bd6a23378c4e0d1f5f8e1ddc3eaf77bf 371 PANTHER PTHR30469:SF15 1 368 7.8E-75 T 22-04-2016 VPUCM_RS12800 bd6a23378c4e0d1f5f8e1ddc3eaf77bf 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 273 2.9E-21 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VPUCM_RS12800 bd6a23378c4e0d1f5f8e1ddc3eaf77bf 371 SUPERFAMILY SSF111369 69 284 6.93E-32 T 22-04-2016 VPUCM_RS14550 b3dd2d9a62014cc6d3b308f343ab759e 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 4.4E-33 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VPUCM_RS14550 b3dd2d9a62014cc6d3b308f343ab759e 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 5.4E-21 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VPUCM_RS11470 0fc3836204db696ab9fa613f1fe84f5c 205 PANTHER PTHR24220:SF508 3 189 9.0E-94 T 22-04-2016 VPUCM_RS11470 0fc3836204db696ab9fa613f1fe84f5c 205 Pfam PF00005 ABC transporter 18 158 5.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS11470 0fc3836204db696ab9fa613f1fe84f5c 205 SMART SM00382 26 205 9.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS11470 0fc3836204db696ab9fa613f1fe84f5c 205 Gene3D G3DSA:3.40.50.300 1 190 1.7E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11470 0fc3836204db696ab9fa613f1fe84f5c 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.9E-77 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 VPUCM_RS11470 0fc3836204db696ab9fa613f1fe84f5c 205 SUPERFAMILY SSF52540 2 193 4.75E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11470 0fc3836204db696ab9fa613f1fe84f5c 205 PANTHER PTHR24220 3 189 9.0E-94 T 22-04-2016 VPUCM_RS11470 0fc3836204db696ab9fa613f1fe84f5c 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 Gene3D G3DSA:1.20.58.410 2 47 4.0E-9 T 22-04-2016 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 SUPERFAMILY SSF75620 2 295 6.67E-126 T 22-04-2016 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 PANTHER PTHR11075 1 294 2.2E-147 T 22-04-2016 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 SMART SM00937 16 126 4.1E-56 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 PANTHER PTHR11075:SF6 1 294 2.2E-147 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 176 192 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 Gene3D G3DSA:3.30.160.20 159 237 7.0E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 Pfam PF03462 PCRF domain 2 150 2.0E-48 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 294 2.9E-149 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VPUCM_RS02520 cd84158777dcfec6971078a337076896 296 Pfam PF00472 RF-1 domain 160 268 1.3E-38 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VPUCM_RS06575 53ebaad3eadad55bc663444cad9ea6e7 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 35 182 5.0E-67 T 22-04-2016 IPR010275 Protein of unknown function DUF882 VPUCM_RS06575 53ebaad3eadad55bc663444cad9ea6e7 182 Gene3D G3DSA:3.30.1380.10 67 182 1.0E-29 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VPUCM_RS06575 53ebaad3eadad55bc663444cad9ea6e7 182 SUPERFAMILY SSF55166 68 182 9.42E-33 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VPUCM_RS06575 53ebaad3eadad55bc663444cad9ea6e7 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 31 1.7E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VPUCM_RS06575 53ebaad3eadad55bc663444cad9ea6e7 182 PANTHER PTHR37425 1 182 6.1E-57 T 22-04-2016 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 Gene3D G3DSA:1.10.287.130 346 403 2.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 SMART SM00387 464 579 2.0E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 Gene3D G3DSA:3.40.50.2300 596 715 1.7E-30 T 22-04-2016 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 575 4.6E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 6.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 Gene3D G3DSA:3.30.450.20 127 197 7.0E-12 T 22-04-2016 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 SUPERFAMILY SSF47384 338 418 4.51E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 Pfam PF00072 Response regulator receiver domain 601 712 1.6E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 SUPERFAMILY SSF52172 596 729 9.39E-28 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 SUPERFAMILY SSF55874 406 575 1.07E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 Pfam PF02743 Cache domain 44 228 2.8E-12 T 22-04-2016 IPR033479 Double Cache domain 1 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 SMART SM00388 352 417 8.2E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 Gene3D G3DSA:3.30.565.10 404 577 1.2E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 PANTHER PTHR24423 36 52 1.8E-123 T 22-04-2016 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 PANTHER PTHR24423 287 759 1.8E-123 T 22-04-2016 VPUCM_RS05780 42dced03c8e4213ccc16e98be31561e3 806 SMART SM00448 598 712 3.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 1.9E-48 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 SMART SM00363 7 65 8.8E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 Pfam PF01479 S4 domain 8 52 4.6E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 SUPERFAMILY SSF55174 8 60 3.36E-14 T 22-04-2016 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 PANTHER PTHR21600:SF24 1 300 1.5E-148 T 22-04-2016 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 Gene3D G3DSA:3.10.290.10 8 67 1.7E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 Pfam PF00849 RNA pseudouridylate synthase 67 193 9.8E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 PANTHER PTHR21600 1 300 1.5E-148 T 22-04-2016 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 SUPERFAMILY SSF55120 66 227 3.45E-38 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS12260 d011e5c4509da2c51cc018c191657d6d 371 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 Gene3D G3DSA:3.90.1150.10 262 362 8.4E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 Gene3D G3DSA:3.40.640.10 21 261 2.4E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 Pfam PF00266 Aminotransferase class-V 8 352 4.9E-63 T 22-04-2016 IPR000192 Aminotransferase class V domain VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 52.364 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 4.9E-163 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 PANTHER PTHR21152:SF1 1 362 1.7E-187 T 22-04-2016 VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 SUPERFAMILY SSF53383 8 362 9.54E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 PIRSF PIRSF000525 2 364 1.7E-154 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VPUCM_RS09790 bf7580a80372e70f775cc3bcb3b88494 364 PANTHER PTHR21152 1 362 1.7E-187 T 22-04-2016 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 1.0E-134 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 5.7E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PANTHER PTHR30330 345 494 7.5E-297 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PANTHER PTHR30330 1 329 7.5E-297 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 Pfam PF01235 Sodium:alanine symporter family 51 472 6.4E-149 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PANTHER PTHR30330:SF7 345 494 7.5E-297 T 22-04-2016 VPUCM_RS03140 d266071fa3f7231e9335522055c41e83 515 PANTHER PTHR30330:SF7 1 329 7.5E-297 T 22-04-2016 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 4.0E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 PANTHER PTHR11964 1 376 9.5E-282 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 SUPERFAMILY SSF55973 233 382 6.67E-71 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 Gene3D G3DSA:3.30.300.10 133 233 5.8E-43 T 22-04-2016 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 3.0E-197 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 SUPERFAMILY SSF55973 111 232 1.29E-51 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.146 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 5.5E-69 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 SUPERFAMILY SSF55973 3 109 1.1E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 PIRSF PIRSF000497 1 381 7.4E-175 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 Gene3D G3DSA:3.30.300.10 11 132 6.5E-50 T 22-04-2016 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 Gene3D G3DSA:3.30.300.10 244 381 3.1E-70 T 22-04-2016 VPUCM_RS13475 8e28631357f3776ce6f333a5122991a9 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.7E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:1.10.1780.10 1 148 1.3E-45 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.8E-57 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:1.10.8.60 343 428 5.9E-37 T 22-04-2016 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 SMART SM00382 597 767 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 SMART SM00382 198 344 3.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 SUPERFAMILY SSF52540 159 545 4.2E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:1.10.8.60 778 853 1.5E-31 T 22-04-2016 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 1.7E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.9E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 7.3E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:3.40.50.300 550 777 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 SUPERFAMILY SSF52540 546 852 1.24E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 PANTHER PTHR11638:SF18 1 853 0.0 T 22-04-2016 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 PANTHER PTHR11638 1 853 0.0 T 22-04-2016 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Gene3D G3DSA:3.40.50.300 160 342 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 SMART SM01086 766 855 7.9E-37 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.5E-28 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VPUCM_RS02750 f838d42aa9d53ff06b0cf3f226b68cae 857 SUPERFAMILY SSF81923 4 156 1.08E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 PANTHER PTHR13779:SF7 8 449 5.3E-201 T 22-04-2016 VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 Gene3D G3DSA:1.10.8.60 155 243 1.7E-7 T 22-04-2016 VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 Gene3D G3DSA:3.40.50.300 13 154 7.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 PANTHER PTHR13779 8 449 5.3E-201 T 22-04-2016 VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 SUPERFAMILY SSF48019 253 435 2.32E-73 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 Pfam PF16193 AAA C-terminal domain 191 268 2.0E-19 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 SMART SM00382 50 166 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 Gene3D G3DSA:1.20.272.10 250 348 3.2E-43 T 22-04-2016 VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 1.4E-16 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 Gene3D G3DSA:1.10.3710.10 349 448 4.3E-34 T 22-04-2016 VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 SUPERFAMILY SSF52540 11 236 5.75E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05980 52c794cb3ce46ca0f521b5de0d357b8b 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.6E-67 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal VPUCM_RS03320 9e82a987e9eaf516c59078b31ae93f5c 196 PIRSF PIRSF004525 1 196 1.5E-13 T 22-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted VPUCM_RS18950 0bdd18950c94d85ae33b9adbdd2ca9ad 336 PANTHER PTHR30425 150 268 7.7E-48 T 22-04-2016 VPUCM_RS18950 0bdd18950c94d85ae33b9adbdd2ca9ad 336 SUPERFAMILY SSF161098 185 298 2.94E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS18950 0bdd18950c94d85ae33b9adbdd2ca9ad 336 PANTHER PTHR30425:SF3 150 268 7.7E-48 T 22-04-2016 VPUCM_RS18950 0bdd18950c94d85ae33b9adbdd2ca9ad 336 PANTHER PTHR30425:SF3 324 333 7.7E-48 T 22-04-2016 VPUCM_RS18950 0bdd18950c94d85ae33b9adbdd2ca9ad 336 PANTHER PTHR30425 324 333 7.7E-48 T 22-04-2016 VPUCM_RS18950 0bdd18950c94d85ae33b9adbdd2ca9ad 336 Gene3D G3DSA:1.10.3720.10 168 298 1.2E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS07010 f290defb48467c0bf3a0f3d60ce1147c 144 Gene3D G3DSA:3.40.630.30 3 132 5.0E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07010 f290defb48467c0bf3a0f3d60ce1147c 144 PANTHER PTHR23091:SF236 4 129 4.0E-22 T 22-04-2016 VPUCM_RS07010 f290defb48467c0bf3a0f3d60ce1147c 144 SUPERFAMILY SSF55729 3 134 4.99E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07010 f290defb48467c0bf3a0f3d60ce1147c 144 Pfam PF13673 Acetyltransferase (GNAT) domain 31 132 1.0E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS07010 f290defb48467c0bf3a0f3d60ce1147c 144 PANTHER PTHR23091 4 129 4.0E-22 T 22-04-2016 VPUCM_RS03890 d394922c95827e33d1e98a058111e4a8 128 Pfam PF00011 Hsp20/alpha crystallin family 27 125 2.4E-15 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VPUCM_RS03890 d394922c95827e33d1e98a058111e4a8 128 PANTHER PTHR11527:SF122 21 127 2.5E-17 T 22-04-2016 VPUCM_RS03890 d394922c95827e33d1e98a058111e4a8 128 Gene3D G3DSA:2.60.40.790 17 127 1.6E-24 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS03890 d394922c95827e33d1e98a058111e4a8 128 SUPERFAMILY SSF49764 20 127 2.51E-26 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS03890 d394922c95827e33d1e98a058111e4a8 128 PANTHER PTHR11527 21 127 2.5E-17 T 22-04-2016 IPR031107 Small heat shock protein HSP20 VPUCM_RS04835 4472c2d885ea181d377e5091dc912bcc 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 8.7E-13 T 22-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC VPUCM_RS04835 4472c2d885ea181d377e5091dc912bcc 76 SUPERFAMILY SSF46785 1 53 4.2E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS04835 4472c2d885ea181d377e5091dc912bcc 76 Gene3D G3DSA:1.10.10.10 5 56 4.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14130 693e5c073b2ba2526da582d450368ce5 362 SMART SM00028 274 307 37.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS14130 693e5c073b2ba2526da582d450368ce5 362 SMART SM00028 174 207 48.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS14130 693e5c073b2ba2526da582d450368ce5 362 SMART SM00028 208 241 5.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS14130 693e5c073b2ba2526da582d450368ce5 362 SUPERFAMILY SSF48452 179 335 5.87E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS14130 693e5c073b2ba2526da582d450368ce5 362 Gene3D G3DSA:1.25.40.10 178 335 2.8E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11575 1e748879d2e1a0d3ff8120c0e264e0d6 643 PANTHER PTHR37533:SF2 201 643 5.2E-39 T 22-04-2016 VPUCM_RS11575 1e748879d2e1a0d3ff8120c0e264e0d6 643 Pfam PF02120 Flagellar hook-length control protein FliK 513 596 3.1E-25 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal VPUCM_RS11575 1e748879d2e1a0d3ff8120c0e264e0d6 643 PANTHER PTHR37533 201 643 5.2E-39 T 22-04-2016 VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 7.0E-62 T 22-04-2016 IPR000150 Cof protein GO:0016787 VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 1.7E-69 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 SUPERFAMILY SSF56784 12 273 2.31E-68 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 Gene3D G3DSA:3.40.50.1000 11 81 3.6E-57 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 Gene3D G3DSA:3.40.50.1000 186 274 3.6E-57 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 22-04-2016 VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 22-04-2016 IPR000150 Cof protein GO:0016787 VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 1.6E-35 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 PANTHER PTHR10000:SF20 12 274 3.4E-123 T 22-04-2016 VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 PANTHER PTHR10000 12 274 3.4E-123 T 22-04-2016 VPUCM_RS15530 3cf94051cee52cfef7645184ec5d7f4c 274 Gene3D G3DSA:3.30.1240.10 92 185 4.0E-20 T 22-04-2016 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:3.40.50.2300 183 307 3.0E-27 T 22-04-2016 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 SUPERFAMILY SSF52172 183 306 9.39E-26 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 PANTHER PTHR22617:SF30 1 169 1.1E-105 T 22-04-2016 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 PANTHER PTHR22617 1 169 1.1E-105 T 22-04-2016 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:2.30.30.40 89 145 5.5E-4 T 22-04-2016 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 Pfam PF01584 CheW-like domain 21 155 5.4E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 PIRSF PIRSF002867 1 308 1.8E-103 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 SUPERFAMILY SSF50341 16 157 1.7E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 SMART SM00448 182 302 6.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 Pfam PF00072 Response regulator receiver domain 184 302 2.5E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS12155 3bc9cdab10bd865c7d73590857f09d17 308 SMART SM00260 17 153 1.3E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 SUPERFAMILY SSF47005 106 150 4.58E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 Pfam PF02817 e3 binding domain 113 146 6.6E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 Gene3D G3DSA:2.40.50.100 1 96 1.4E-25 T 22-04-2016 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 SUPERFAMILY SSF52777 171 400 3.11E-90 T 22-04-2016 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 Gene3D G3DSA:3.30.559.10 161 399 3.9E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 2.0E-188 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 Gene3D G3DSA:4.10.320.10 113 153 2.7E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 Pfam PF00364 Biotin-requiring enzyme 4 76 2.1E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 PANTHER PTHR23151 3 401 5.4E-247 T 22-04-2016 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 2.9E-82 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 PANTHER PTHR23151:SF47 3 401 5.4E-247 T 22-04-2016 VPUCM_RS11790 4b05fc66019c25c5ab5f1bb7f9512b2d 401 SUPERFAMILY SSF51230 1 95 4.19E-24 T 22-04-2016 IPR011053 Single hybrid motif VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 PANTHER PTHR26402 2 214 4.1E-110 T 22-04-2016 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 SMART SM00448 2 115 8.3E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.8E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 PANTHER PTHR26402:SF506 2 214 4.1E-110 T 22-04-2016 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 SMART SM00421 146 203 2.0E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF46894 136 210 1.39E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:3.40.50.2300 2 120 2.3E-34 T 22-04-2016 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:1.10.10.10 121 211 2.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00072 Response regulator receiver domain 4 116 3.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 7.5E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS06405 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF52172 2 132 1.18E-33 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.8E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 PANTHER PTHR19139 1 232 3.9E-76 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 Gene3D G3DSA:1.20.1080.10 1 228 2.7E-66 T 22-04-2016 IPR023271 Aquaporin-like VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 Pfam PF00230 Major intrinsic protein 2 222 2.1E-48 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 SUPERFAMILY SSF81338 2 227 3.79E-68 T 22-04-2016 IPR023271 Aquaporin-like VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 1.8E-59 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 PANTHER PTHR19139:SF103 1 232 3.9E-76 T 22-04-2016 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 VPUCM_RS11240 a5bf9a3709ab779fb667e4cdaa80ef32 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.001 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VPUCM_RS07530 e9af46b9c7139cdba7cb4bacf85d817f 126 Pfam PF01627 Hpt domain 34 109 6.6E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS07530 e9af46b9c7139cdba7cb4bacf85d817f 126 Gene3D G3DSA:1.20.120.160 7 118 8.8E-24 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS07530 e9af46b9c7139cdba7cb4bacf85d817f 126 SUPERFAMILY SSF47226 10 118 1.13E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS02365 a33a7457d9def6e51ca8524b74a7fedf 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 2.1E-100 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VPUCM_RS02365 a33a7457d9def6e51ca8524b74a7fedf 231 PANTHER PTHR21234:SF16 1 228 1.5E-64 T 22-04-2016 VPUCM_RS02365 a33a7457d9def6e51ca8524b74a7fedf 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.007 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VPUCM_RS02365 a33a7457d9def6e51ca8524b74a7fedf 231 Gene3D G3DSA:3.40.50.1580 1 230 4.7E-80 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS02365 a33a7457d9def6e51ca8524b74a7fedf 231 SUPERFAMILY SSF53167 1 229 8.51E-74 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS02365 a33a7457d9def6e51ca8524b74a7fedf 231 PANTHER PTHR21234 1 228 1.5E-64 T 22-04-2016 IPR018017 Nucleoside phosphorylase VPUCM_RS02365 a33a7457d9def6e51ca8524b74a7fedf 231 Pfam PF01048 Phosphorylase superfamily 2 227 6.2E-49 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 126 244 1.74E-28 T 22-04-2016 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.1E-35 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 PANTHER PTHR30478 2 366 8.2E-145 T 22-04-2016 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.0E-38 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.3E-38 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 SMART SM00480 17 362 5.5E-151 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 1 121 2.8E-33 T 22-04-2016 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 1 118 2.54E-30 T 22-04-2016 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 122 248 1.5E-37 T 22-04-2016 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 PIRSF PIRSF000804 1 366 3.2E-118 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 6.4E-109 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 249 366 2.2E-38 T 22-04-2016 VPUCM_RS00050 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 245 366 2.06E-36 T 22-04-2016 VPUCM_RS09600 33359569270181211a07c7876570bfa8 269 SUPERFAMILY SSF47413 6 71 1.13E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS09600 33359569270181211a07c7876570bfa8 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 7.0E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS09600 33359569270181211a07c7876570bfa8 269 SMART SM00530 12 66 1.5E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS09600 33359569270181211a07c7876570bfa8 269 Gene3D G3DSA:1.10.260.40 6 68 9.3E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS02040 f14b3b600a6c98a3632994be9ecec452 160 PANTHER PTHR20941:SF12 1 158 5.5E-55 T 22-04-2016 VPUCM_RS02040 f14b3b600a6c98a3632994be9ecec452 160 PANTHER PTHR20941 1 158 5.5E-55 T 22-04-2016 VPUCM_RS02040 f14b3b600a6c98a3632994be9ecec452 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.3E-24 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS02040 f14b3b600a6c98a3632994be9ecec452 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 2.0E-28 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS02040 f14b3b600a6c98a3632994be9ecec452 160 SUPERFAMILY SSF55083 1 148 6.93E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS02040 f14b3b600a6c98a3632994be9ecec452 160 Gene3D G3DSA:3.30.70.560 3 149 3.4E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 PANTHER PTHR10192 4 168 4.6E-99 T 22-04-2016 VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 1.3E-37 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 PANTHER PTHR10192:SF18 4 168 4.6E-99 T 22-04-2016 VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 PIRSF PIRSF006443 1 166 4.7E-67 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 Gene3D G3DSA:3.40.980.10 6 166 4.2E-51 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 SMART SM00852 14 158 3.0E-28 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 7.9E-35 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 SUPERFAMILY SSF53218 7 168 1.44E-47 T 22-04-2016 IPR001453 MoaB/Mog domain VPUCM_RS05650 ee91e78910969f20db8dd97f33af3b42 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 1.8E-85 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 VPUCM_RS11865 630b72149f82cf94556ac29d53523cd9 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.4E-46 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VPUCM_RS11865 630b72149f82cf94556ac29d53523cd9 149 Gene3D G3DSA:1.10.10.10 2 82 1.5E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11865 630b72149f82cf94556ac29d53523cd9 149 PANTHER PTHR33202 1 135 6.9E-45 T 22-04-2016 VPUCM_RS11865 630b72149f82cf94556ac29d53523cd9 149 SUPERFAMILY SSF46785 5 135 8.86E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.5E-47 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 4.2E-34 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 SUPERFAMILY SSF142019 95 302 1.44E-59 T 22-04-2016 VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 Gene3D G3DSA:1.10.1060.10 366 450 3.3E-19 T 22-04-2016 VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 Pfam PF10531 SLBB domain 296 345 2.9E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 761 251.175 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 PANTHER PTHR11780 1 483 6.6E-236 T 22-04-2016 VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 Pfam PF12838 4Fe-4S dicluster domain 378 430 4.1E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 PANTHER PTHR11780:SF1 1 483 6.6E-236 T 22-04-2016 VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 SUPERFAMILY SSF46548 336 446 1.07E-21 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS10965 44feaa01855d8514055d775247b6c5bd 903 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 4.2E-190 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VPUCM_RS01300 7c043981c248447db2662f5aa2d7df3d 347 SUPERFAMILY SSF52540 94 166 3.35E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01300 7c043981c248447db2662f5aa2d7df3d 347 SUPERFAMILY SSF52540 11 44 3.35E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15935 e1d0c67260555257e3f8ccdc573b1186 200 Gene3D G3DSA:3.40.30.10 2 117 2.4E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS15935 e1d0c67260555257e3f8ccdc573b1186 200 Gene3D G3DSA:3.40.30.10 119 199 3.3E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS15935 e1d0c67260555257e3f8ccdc573b1186 200 PIRSF PIRSF001488 1 200 1.3E-70 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VPUCM_RS15935 e1d0c67260555257e3f8ccdc573b1186 200 PANTHER PTHR35891 1 200 1.8E-84 T 22-04-2016 VPUCM_RS15935 e1d0c67260555257e3f8ccdc573b1186 200 PANTHER PTHR35891:SF2 1 200 1.8E-84 T 22-04-2016 VPUCM_RS15935 e1d0c67260555257e3f8ccdc573b1186 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 2.9E-29 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 VPUCM_RS15935 e1d0c67260555257e3f8ccdc573b1186 200 SUPERFAMILY SSF52833 20 197 1.6E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS15935 e1d0c67260555257e3f8ccdc573b1186 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 SMART SM00382 43 241 7.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.1E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 Pfam PF00005 ABC transporter 35 192 5.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 PANTHER PTHR24220 11 328 2.7E-115 T 22-04-2016 VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 SUPERFAMILY SSF52540 10 262 6.14E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 PANTHER PTHR24220:SF81 11 328 2.7E-115 T 22-04-2016 VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 Gene3D G3DSA:3.40.50.300 9 265 4.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.1E-22 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS12850 400bf75ecd3a947143e9902b6b3b4e4d 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 Gene3D G3DSA:3.40.50.800 327 420 3.5E-31 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 5.6E-159 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 PANTHER PTHR11476:SF9 2 422 3.5E-228 T 22-04-2016 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 Gene3D G3DSA:3.30.930.10 221 320 9.9E-100 T 22-04-2016 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 Gene3D G3DSA:3.30.930.10 4 185 9.9E-100 T 22-04-2016 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 SUPERFAMILY SSF55681 5 320 2.79E-104 T 22-04-2016 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 6.1E-46 T 22-04-2016 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 PANTHER PTHR11476 2 422 3.5E-228 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 Pfam PF03129 Anticodon binding domain 329 420 2.3E-11 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.822 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 SUPERFAMILY SSF52954 327 421 1.28E-26 T 22-04-2016 IPR004154 Anticodon-binding VPUCM_RS03005 d279990f4c57d41885c624a1c435fdb6 422 PIRSF PIRSF001549 2 422 3.8E-126 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 SUPERFAMILY SSF51569 4 356 5.68E-132 T 22-04-2016 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 Gene3D G3DSA:3.20.20.70 11 354 7.9E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.5E-90 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 1.5E-180 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 PANTHER PTHR30559:SF0 2 358 1.3E-249 T 22-04-2016 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 PIRSF PIRSF001359 13 358 5.9E-94 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 3.3E-111 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS13440 53688fd63b46e10afbbf3d8ecb06cd75 358 PANTHER PTHR30559 2 358 1.3E-249 T 22-04-2016 VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 468 611 2.4E-37 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 Gene3D G3DSA:3.10.580.10 149 267 7.6E-29 T 22-04-2016 VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 SUPERFAMILY SSF54631 151 267 2.27E-27 T 22-04-2016 VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 SMART SM00116 222 270 0.35 T 22-04-2016 IPR000644 CBS domain VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 SMART SM00116 158 205 2.2E-7 T 22-04-2016 IPR000644 CBS domain VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 Pfam PF00571 CBS domain 151 203 6.0E-9 T 22-04-2016 IPR000644 CBS domain VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 Pfam PF00571 CBS domain 215 267 4.5E-8 T 22-04-2016 IPR000644 CBS domain VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 Gene3D G3DSA:2.60.120.10 8 131 2.4E-9 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 Pfam PF03445 Putative nucleotidyltransferase DUF294 296 429 1.1E-42 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 SUPERFAMILY SSF51206 9 131 3.93E-12 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS04250 4c9313412c78865ee474a8abe6045ee2 613 PANTHER PTHR11911 149 282 2.0E-24 T 22-04-2016 VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 Gene3D G3DSA:3.10.50.40 262 386 4.4E-43 T 22-04-2016 VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 1.2E-24 T 22-04-2016 VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 SUPERFAMILY SSF109998 203 245 1.57E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 SUPERFAMILY SSF109998 39 169 1.57E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 PANTHER PTHR10657 1 175 8.9E-170 T 22-04-2016 VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 PANTHER PTHR10657 203 518 8.9E-170 T 22-04-2016 VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 PANTHER PTHR10657:SF13 1 175 8.9E-170 T 22-04-2016 VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 PANTHER PTHR10657:SF13 203 518 8.9E-170 T 22-04-2016 VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 SUPERFAMILY SSF54534 225 361 1.77E-31 T 22-04-2016 VPUCM_RS05145 ec2aae5cd4ec0a627889c12a559a60ca 619 Pfam PF13624 SurA N-terminal domain 1 166 6.4E-51 T 22-04-2016 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 22-04-2016 IPR020845 AMP-binding, conserved site VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 PANTHER PTHR24096:SF109 17 480 1.6E-154 T 22-04-2016 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 PANTHER PTHR24096 17 480 1.6E-154 T 22-04-2016 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 SUPERFAMILY SSF56801 17 476 4.71E-85 T 22-04-2016 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 Pfam PF00501 AMP-binding enzyme 21 380 2.6E-50 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 Gene3D G3DSA:2.30.38.10 327 374 7.4E-5 T 22-04-2016 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 Gene3D G3DSA:3.30.300.30 375 471 6.9E-19 T 22-04-2016 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 Gene3D G3DSA:3.40.50.980 21 171 6.2E-22 T 22-04-2016 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 Gene3D G3DSA:3.40.50.980 172 313 4.8E-27 T 22-04-2016 VPUCM_RS05205 f51a35aa85cb23a965c0f1f4e8b81587 480 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 40 468 5.9E-127 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 Hamap MF_01899 Ribonuclease D [rnd]. 19 388 44.066 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 SMART SM00474 19 187 1.0E-43 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 Gene3D G3DSA:3.30.420.10 18 194 2.2E-20 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 SUPERFAMILY SSF53098 14 225 1.05E-70 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 PANTHER PTHR12124:SF42 17 363 5.7E-89 T 22-04-2016 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 PANTHER PTHR12124 17 363 5.7E-89 T 22-04-2016 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 SUPERFAMILY SSF47819 312 387 6.21E-22 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 TIGRFAM TIGR01388 rnd: ribonuclease D 21 385 1.6E-147 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 Pfam PF01612 3'-5' exonuclease 19 186 7.2E-42 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 Pfam PF00570 HRDC domain 229 295 1.1E-9 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VPUCM_RS04890 918571940c121deffd4c2b0538f0667a 388 SUPERFAMILY SSF47819 210 317 4.14E-24 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VPUCM_RS03530 778da0cba850305c4d5dfc69ea7a0331 123 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 33 43 2.2E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VPUCM_RS03530 778da0cba850305c4d5dfc69ea7a0331 123 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 44 55 2.2E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VPUCM_RS03530 778da0cba850305c4d5dfc69ea7a0331 123 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 72 84 2.2E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VPUCM_RS03530 778da0cba850305c4d5dfc69ea7a0331 123 Pfam PF00717 Peptidase S24-like 36 102 9.5E-14 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B VPUCM_RS03530 778da0cba850305c4d5dfc69ea7a0331 123 PANTHER PTHR33516 10 122 6.4E-46 T 22-04-2016 VPUCM_RS03530 778da0cba850305c4d5dfc69ea7a0331 123 Gene3D G3DSA:2.10.109.10 9 120 6.7E-46 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VPUCM_RS03530 778da0cba850305c4d5dfc69ea7a0331 123 SUPERFAMILY SSF51306 13 117 1.31E-32 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VPUCM_RS03530 778da0cba850305c4d5dfc69ea7a0331 123 PANTHER PTHR33516:SF1 10 122 6.4E-46 T 22-04-2016 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 SUPERFAMILY SSF64397 4 231 1.96E-75 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:3.55.30.10 3 175 1.3E-63 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.477 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 PANTHER PTHR30111 1 287 1.3E-75 T 22-04-2016 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 PANTHER PTHR30111:SF1 1 287 1.3E-75 T 22-04-2016 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:3.90.1280.10 225 281 1.1E-21 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 SUPERFAMILY SSF118352 223 281 1.44E-17 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 Pfam PF01430 Hsp33 protein 6 272 1.1E-77 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:1.10.287.480 176 224 1.8E-26 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain VPUCM_RS00650 ec65c3faa27e02fc4e883553bfb087b7 291 PIRSF PIRSF005261 1 284 4.6E-69 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 Gene3D G3DSA:3.40.50.2300 9 137 2.0E-30 T 22-04-2016 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 Gene3D G3DSA:1.10.10.10 138 192 4.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 SUPERFAMILY SSF46894 134 193 2.45E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 Pfam PF00072 Response regulator receiver domain 9 117 1.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 PANTHER PTHR26402 6 194 1.2E-76 T 22-04-2016 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 SUPERFAMILY SSF52172 10 142 1.24E-31 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 PANTHER PTHR26402:SF599 6 194 1.2E-76 T 22-04-2016 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 SMART SM00421 137 194 8.1E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 SMART SM00448 6 117 8.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS10015 feab2ddc9af0ee7ebff042704b240de5 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 7.2E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS02180 a893671035d3d515bb610a7dc544dd4e 245 Gene3D G3DSA:1.10.760.10 16 210 3.5E-62 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS02180 a893671035d3d515bb610a7dc544dd4e 245 SUPERFAMILY SSF46626 16 208 6.59E-50 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS02180 a893671035d3d515bb610a7dc544dd4e 245 PANTHER PTHR10266:SF3 188 245 3.4E-70 T 22-04-2016 VPUCM_RS02180 a893671035d3d515bb610a7dc544dd4e 245 PANTHER PTHR10266:SF3 1 162 3.4E-70 T 22-04-2016 VPUCM_RS02180 a893671035d3d515bb610a7dc544dd4e 245 PANTHER PTHR10266 188 245 3.4E-70 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VPUCM_RS02180 a893671035d3d515bb610a7dc544dd4e 245 PANTHER PTHR10266 1 162 3.4E-70 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VPUCM_RS02180 a893671035d3d515bb610a7dc544dd4e 245 Gene3D G3DSA:1.20.5.100 214 245 1.8E-9 T 22-04-2016 VPUCM_RS02180 a893671035d3d515bb610a7dc544dd4e 245 Pfam PF02167 Cytochrome C1 family 33 244 5.1E-16 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PANTHER PTHR23115:SF175 397 595 1.1E-276 T 22-04-2016 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PANTHER PTHR23115:SF175 2 373 1.1E-276 T 22-04-2016 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PANTHER PTHR23115 397 595 1.1E-276 T 22-04-2016 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PANTHER PTHR23115 2 373 1.1E-276 T 22-04-2016 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Pfam PF00679 Elongation factor G C-terminus 399 482 1.0E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 SUPERFAMILY SSF54980 399 493 2.3E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 SUPERFAMILY SSF52540 2 205 2.31E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Gene3D G3DSA:3.30.70.870 291 369 8.4E-26 T 22-04-2016 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Gene3D G3DSA:2.40.30.10 193 289 1.4E-23 T 22-04-2016 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.1E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 SMART SM00838 398 486 0.0051 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.583 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Gene3D G3DSA:3.40.50.300 2 192 2.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.1E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 9.5E-301 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 4.0E-52 T 22-04-2016 VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 4.5E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 Gene3D G3DSA:3.30.70.240 401 489 3.1E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS13330 e68e1731ba9dc669f24f0783cad2201b 597 SUPERFAMILY SSF50447 165 288 1.48E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS10540 19b51c8cd8eb61a89dc2b5e4da964c04 210 SUPERFAMILY SSF52540 2 209 4.65E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10540 19b51c8cd8eb61a89dc2b5e4da964c04 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.634 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VPUCM_RS10540 19b51c8cd8eb61a89dc2b5e4da964c04 210 Pfam PF02223 Thymidylate kinase 9 199 8.1E-58 T 22-04-2016 VPUCM_RS10540 19b51c8cd8eb61a89dc2b5e4da964c04 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VPUCM_RS10540 19b51c8cd8eb61a89dc2b5e4da964c04 210 PANTHER PTHR10344 1 209 8.9E-68 T 22-04-2016 VPUCM_RS10540 19b51c8cd8eb61a89dc2b5e4da964c04 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.9E-62 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VPUCM_RS10540 19b51c8cd8eb61a89dc2b5e4da964c04 210 Gene3D G3DSA:3.40.50.300 6 208 2.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02395 dac78792a67580187e3149bb0557c760 319 PANTHER PTHR11135:SF1 1 291 1.1E-143 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 VPUCM_RS02395 dac78792a67580187e3149bb0557c760 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 298 5.5E-135 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 VPUCM_RS02395 dac78792a67580187e3149bb0557c760 319 Gene3D G3DSA:3.80.30.20 22 250 1.7E-34 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VPUCM_RS02395 dac78792a67580187e3149bb0557c760 319 Pfam PF04055 Radical SAM superfamily 43 202 1.3E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS02395 dac78792a67580187e3149bb0557c760 319 PANTHER PTHR11135 1 291 1.1E-143 T 22-04-2016 VPUCM_RS02395 dac78792a67580187e3149bb0557c760 319 SUPERFAMILY SSF102114 13 268 9.81E-51 T 22-04-2016 VPUCM_RS02395 dac78792a67580187e3149bb0557c760 319 SMART SM00729 23 247 8.7E-48 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VPUCM_RS02395 dac78792a67580187e3149bb0557c760 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 3.0E-17 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 PANTHER PTHR30126:SF6 1 309 8.6E-214 T 22-04-2016 VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:3.40.190.10 184 260 3.2E-30 T 22-04-2016 VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 SUPERFAMILY SSF53850 91 322 3.53E-42 T 22-04-2016 VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 Pfam PF03466 LysR substrate binding domain 91 292 3.9E-39 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:1.10.10.10 1 81 3.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 PANTHER PTHR30126 1 309 8.6E-214 T 22-04-2016 VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:3.40.190.10 91 183 3.9E-20 T 22-04-2016 VPUCM_RS05950 b33fb0ec9a51ae39d74781188c76662a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 PANTHER PTHR33175 1 90 1.9E-54 T 22-04-2016 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 PANTHER PTHR33175:SF4 1 90 1.9E-54 T 22-04-2016 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 SMART SM00411 1 90 1.6E-46 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS15165 a7fe7f129311e398727bf9c00abc051e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.6E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS11260 70a9756154c715a099543e5a40cce46a 181 SUPERFAMILY SSF53271 11 178 2.02E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS11260 70a9756154c715a099543e5a40cce46a 181 PANTHER PTHR32315 1 181 1.0E-80 T 22-04-2016 VPUCM_RS11260 70a9756154c715a099543e5a40cce46a 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 1.3E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VPUCM_RS11260 70a9756154c715a099543e5a40cce46a 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.3E-72 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VPUCM_RS11260 70a9756154c715a099543e5a40cce46a 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.806 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VPUCM_RS11260 70a9756154c715a099543e5a40cce46a 181 Gene3D G3DSA:3.40.50.2020 5 179 4.6E-69 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS05465 4d683f8201f897a8ff44025130f80cb5 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 1.2E-106 T 22-04-2016 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896|UniPathway: UPA00060 VPUCM_RS05465 4d683f8201f897a8ff44025130f80cb5 293 Pfam PF01633 Choline/ethanolamine kinase 66 215 4.0E-12 T 22-04-2016 VPUCM_RS05465 4d683f8201f897a8ff44025130f80cb5 293 Gene3D G3DSA:3.90.1200.10 82 277 1.8E-18 T 22-04-2016 VPUCM_RS05465 4d683f8201f897a8ff44025130f80cb5 293 SUPERFAMILY SSF56112 25 273 2.48E-42 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS16180 085e8ee52792dd9f77fd579c76b97b3f 164 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 1 162 6.3E-51 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS16180 085e8ee52792dd9f77fd579c76b97b3f 164 PANTHER PTHR30075 1 164 1.8E-85 T 22-04-2016 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 SUPERFAMILY SSF68923 11 228 2.62E-88 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 SUPERFAMILY SSF53795 230 541 1.96E-128 T 22-04-2016 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.90.228.20 352 540 6.4E-121 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.90.228.20 229 291 6.4E-121 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.40.449.10 24 227 4.8E-87 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 PANTHER PTHR30031:SF0 5 542 0.0 T 22-04-2016 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 PANTHER PTHR30031 5 542 0.0 T 22-04-2016 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-278 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 18 539 55.124 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 3.1E-211 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPUCM_RS00645 b3035c1dd8d90a33ff051778a2360f95 542 PIRSF PIRSF006294 4 541 1.5E-227 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 SUPERFAMILY SSF81901 34 200 7.59E-21 T 22-04-2016 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 239 5.3E-80 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 Gene3D G3DSA:1.25.40.10 39 236 5.9E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 Pfam PF13431 Tetratricopeptide repeat 95 127 1.7E-6 T 22-04-2016 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 Pfam PF14559 Tetratricopeptide repeat 153 197 1.0E-5 T 22-04-2016 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 PANTHER PTHR23083 38 206 5.1E-18 T 22-04-2016 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 39 72 42.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 73 106 6.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 107 140 46.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS09095 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 143 176 0.66 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS20135 94439981a7e42403dca386812a7a2f25 294 Gene3D G3DSA:3.30.450.90 1 50 6.8E-17 T 22-04-2016 VPUCM_RS20135 94439981a7e42403dca386812a7a2f25 294 SUPERFAMILY SSF52540 2 277 1.34E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS20135 94439981a7e42403dca386812a7a2f25 294 PANTHER PTHR30258:SF3 1 284 9.0E-106 T 22-04-2016 VPUCM_RS20135 94439981a7e42403dca386812a7a2f25 294 Pfam PF00437 Type II/IV secretion system protein 2 233 3.9E-76 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS20135 94439981a7e42403dca386812a7a2f25 294 Gene3D G3DSA:3.40.50.300 55 269 5.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS20135 94439981a7e42403dca386812a7a2f25 294 PANTHER PTHR30258 1 284 9.0E-106 T 22-04-2016 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 SUPERFAMILY SSF56801 13 553 4.06E-150 T 22-04-2016 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.30.300.30 456 552 2.8E-27 T 22-04-2016 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.40.50.980 217 379 2.2E-42 T 22-04-2016 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 Pfam PF00501 AMP-binding enzyme 29 461 1.6E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.3E-17 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:2.30.38.10 380 452 9.1E-30 T 22-04-2016 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 22-04-2016 IPR020845 AMP-binding, conserved site VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 PANTHER PTHR24096 11 153 1.5E-174 T 22-04-2016 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 PANTHER PTHR24096 176 554 1.5E-174 T 22-04-2016 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.40.50.980 185 216 1.1E-39 T 22-04-2016 VPUCM_RS04885 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.40.50.980 24 152 1.1E-39 T 22-04-2016 VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Gene3D G3DSA:3.90.1150.10 284 415 5.3E-55 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 SUPERFAMILY SSF53383 6 415 3.85E-185 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Gene3D G3DSA:3.40.640.10 37 283 4.7E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.536 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 PANTHER PTHR11680 1 415 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 1.9E-183 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 PIRSF PIRSF000412 1 416 2.1E-169 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VPUCM_RS12535 66f042aa00b4d52c14ba96ad8bcbb4a1 416 PANTHER PTHR11680:SF9 1 415 0.0 T 22-04-2016 VPUCM_RS06620 ea9071d9f6a7a6bbc0a7779448963a6e 158 Gene3D G3DSA:1.10.10.10 3 139 2.9E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06620 ea9071d9f6a7a6bbc0a7779448963a6e 158 PANTHER PTHR33164 1 148 1.1E-22 T 22-04-2016 VPUCM_RS06620 ea9071d9f6a7a6bbc0a7779448963a6e 158 SMART SM00347 24 124 1.8E-19 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS06620 ea9071d9f6a7a6bbc0a7779448963a6e 158 SUPERFAMILY SSF46785 4 141 1.29E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06620 ea9071d9f6a7a6bbc0a7779448963a6e 158 Pfam PF01047 MarR family 31 89 8.7E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 SMART SM00267 346 512 2.7E-37 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 PANTHER PTHR10799:SF706 234 507 5.4E-14 T 22-04-2016 VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 511 2.0E-33 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 508 4.3E-33 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 PANTHER PTHR10799 234 507 5.4E-14 T 22-04-2016 VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 SUPERFAMILY SSF55073 362 511 1.96E-37 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 Pfam PF03924 CHASE domain 84 272 1.1E-25 T 22-04-2016 IPR006189 CHASE domain VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 SMART SM01079 78 274 9.2E-33 T 22-04-2016 IPR006189 CHASE domain VPUCM_RS07805 9988a75b486bbecae60b85503631b79a 513 Gene3D G3DSA:3.30.70.270 359 511 5.0E-41 T 22-04-2016 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 Pfam PF00366 Ribosomal protein S17 10 77 7.9E-35 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 PANTHER PTHR10744 6 82 5.7E-44 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.214 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.4E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.4E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.4E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 Gene3D G3DSA:2.40.50.140 5 82 3.4E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 2.1E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 3.0E-37 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01475 c15f837e88612bc3571fe866ebb65f44 84 SUPERFAMILY SSF50249 6 83 5.57E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS12680 489f39ad98ced162c25c0499c5a94723 168 Gene3D G3DSA:1.10.3760.10 113 156 1.4E-4 T 22-04-2016 IPR027416 YutG-like domain VPUCM_RS12680 489f39ad98ced162c25c0499c5a94723 168 PIRSF PIRSF006162 6 167 2.5E-55 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VPUCM_RS12680 489f39ad98ced162c25c0499c5a94723 168 PANTHER PTHR36305 1 166 1.9E-70 T 22-04-2016 VPUCM_RS12680 489f39ad98ced162c25c0499c5a94723 168 SUPERFAMILY SSF101307 9 161 7.72E-50 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VPUCM_RS12680 489f39ad98ced162c25c0499c5a94723 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 1.6E-53 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VPUCM_RS08380 da6397e2363e546efc4d4fdeacdc8ef3 209 SMART SM00945 3 117 8.3E-66 T 22-04-2016 IPR016103 ProQ/FinO domain VPUCM_RS08380 da6397e2363e546efc4d4fdeacdc8ef3 209 SUPERFAMILY SSF48657 4 117 9.55E-41 T 22-04-2016 IPR016103 ProQ/FinO domain VPUCM_RS08380 da6397e2363e546efc4d4fdeacdc8ef3 209 Pfam PF04352 ProQ/FINO family 6 113 2.2E-43 T 22-04-2016 IPR016103 ProQ/FinO domain VPUCM_RS08380 da6397e2363e546efc4d4fdeacdc8ef3 209 Gene3D G3DSA:1.10.1710.10 1 116 7.7E-38 T 22-04-2016 IPR016103 ProQ/FinO domain VPUCM_RS08380 da6397e2363e546efc4d4fdeacdc8ef3 209 PANTHER PTHR38106 1 209 1.5E-79 T 22-04-2016 VPUCM_RS08380 da6397e2363e546efc4d4fdeacdc8ef3 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 209 30.424 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VPUCM_RS08380 da6397e2363e546efc4d4fdeacdc8ef3 209 PANTHER PTHR38106:SF1 1 209 1.5E-79 T 22-04-2016 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 PANTHER PTHR11735:SF6 1 334 1.1E-167 T 22-04-2016 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.3E-133 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 SUPERFAMILY SSF53067 101 309 3.89E-43 T 22-04-2016 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 SUPERFAMILY SSF53067 3 123 6.04E-31 T 22-04-2016 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 PANTHER PTHR11735 1 334 1.1E-167 T 22-04-2016 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 Pfam PF00814 Glycoprotease family 24 307 3.5E-103 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 Gene3D G3DSA:3.30.420.40 1 159 2.4E-47 T 22-04-2016 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 2.5E-123 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.396 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.1E-50 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS02020 47e11ee4a33d888c98df1af5b96d2e79 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VPUCM_RS07930 ab955fd00a14130f0e1ec82045524bec 272 Pfam PF12849 PBP superfamily domain 30 247 1.9E-31 T 22-04-2016 IPR024370 PBP domain VPUCM_RS07930 ab955fd00a14130f0e1ec82045524bec 272 Gene3D G3DSA:3.40.190.10 189 271 1.7E-27 T 22-04-2016 VPUCM_RS07930 ab955fd00a14130f0e1ec82045524bec 272 PANTHER PTHR37945 1 272 1.8E-109 T 22-04-2016 VPUCM_RS07930 ab955fd00a14130f0e1ec82045524bec 272 SUPERFAMILY SSF53850 29 256 1.25E-32 T 22-04-2016 VPUCM_RS07930 ab955fd00a14130f0e1ec82045524bec 272 Gene3D G3DSA:3.40.190.10 11 154 1.8E-46 T 22-04-2016 VPUCM_RS07360 30df7237b0bdb58ba4f57483d9a7cf07 302 PANTHER PTHR34631 3 302 2.1E-188 T 22-04-2016 VPUCM_RS07360 30df7237b0bdb58ba4f57483d9a7cf07 302 Pfam PF13737 Transposase DDE domain 19 129 7.4E-45 T 22-04-2016 IPR025668 Transposase DDE domain VPUCM_RS07360 30df7237b0bdb58ba4f57483d9a7cf07 302 PANTHER PTHR34631:SF2 3 302 2.1E-188 T 22-04-2016 VPUCM_RS02555 3a7e5296b64c4f64efa626914b2f2ce3 174 SUPERFAMILY SSF55811 6 152 8.53E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS02555 3a7e5296b64c4f64efa626914b2f2ce3 174 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VPUCM_RS02555 3a7e5296b64c4f64efa626914b2f2ce3 174 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH VPUCM_RS02555 3a7e5296b64c4f64efa626914b2f2ce3 174 Pfam PF00293 NUDIX domain 7 145 6.2E-27 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS02555 3a7e5296b64c4f64efa626914b2f2ce3 174 PANTHER PTHR23114 1 160 1.7E-63 T 22-04-2016 VPUCM_RS02555 3a7e5296b64c4f64efa626914b2f2ce3 174 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase VPUCM_RS02555 3a7e5296b64c4f64efa626914b2f2ce3 174 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase VPUCM_RS02555 3a7e5296b64c4f64efa626914b2f2ce3 174 Gene3D G3DSA:3.90.79.10 5 151 4.3E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 SUPERFAMILY SSF52540 3 306 1.86E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 3.4E-145 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 PIRSF PIRSF000545 1 307 1.4E-145 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 179.72 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 Gene3D G3DSA:3.40.50.300 2 307 4.3E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 PANTHER PTHR10285:SF7 269 301 1.0E-153 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 PANTHER PTHR10285:SF7 1 253 1.0E-153 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 233 4.5E-12 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 PANTHER PTHR10285 269 301 1.0E-153 T 22-04-2016 VPUCM_RS15280 fcb7946e9a852872d6257ab5add748b6 307 PANTHER PTHR10285 1 253 1.0E-153 T 22-04-2016 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 SUPERFAMILY SSF55200 41 129 1.44E-34 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 4.4E-14 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 Gene3D G3DSA:3.30.110.10 37 129 2.5E-40 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 1.2E-37 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 Gene3D G3DSA:3.10.20.80 1 36 1.5E-16 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 SUPERFAMILY SSF54364 1 36 1.57E-13 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 8.0E-59 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 VPUCM_RS09620 c0359434217556b67094ac454b13ed06 129 PANTHER PTHR10938 1 129 2.3E-50 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 VPUCM_RS11625 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 SUPERFAMILY SSF101116 6 127 4.05E-39 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VPUCM_RS11625 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Gene3D G3DSA:1.20.120.340 6 126 8.8E-42 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VPUCM_RS11625 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Pfam PF02561 Flagellar protein FliS 6 122 2.5E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VPUCM_RS11625 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 PIRSF PIRSF039090 1 133 1.3E-42 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VPUCM_RS11625 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 6.2E-24 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VPUCM_RS11625 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 PANTHER PTHR34773 1 133 7.1E-42 T 22-04-2016 VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 SUPERFAMILY SSF53901 210 391 1.44E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 351 1.4E-27 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 SUPERFAMILY SSF53901 7 235 2.25E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 SMART SM00825 Beta-ketoacyl synthase 41 338 1.2E-9 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 Gene3D G3DSA:3.40.47.10 63 236 1.3E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 97 236 1.8E-20 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 PANTHER PTHR11712 99 118 2.1E-59 T 22-04-2016 VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 PANTHER PTHR11712 140 390 2.1E-59 T 22-04-2016 VPUCM_RS04960 299009076546b4de78f9dce00f107651 395 Gene3D G3DSA:3.40.47.10 249 391 6.4E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS05755 cf63d0683c1b9be010c156f01cb343e1 347 SUPERFAMILY SSF51735 121 240 4.92E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS05755 cf63d0683c1b9be010c156f01cb343e1 347 Pfam PF07885 Ion channel 26 100 1.5E-14 T 22-04-2016 IPR013099 Potassium channel domain VPUCM_RS05755 cf63d0683c1b9be010c156f01cb343e1 347 Gene3D G3DSA:3.40.50.720 113 233 2.8E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS05755 cf63d0683c1b9be010c156f01cb343e1 347 Gene3D G3DSA:1.10.287.70 24 97 4.7E-14 T 22-04-2016 VPUCM_RS05755 cf63d0683c1b9be010c156f01cb343e1 347 SUPERFAMILY SSF81324 9 138 6.67E-18 T 22-04-2016 VPUCM_RS09215 8a50c366f267d795c6bd72787c07e13d 494 SUPERFAMILY SSF53720 7 492 1.05E-169 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09215 8a50c366f267d795c6bd72787c07e13d 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09215 8a50c366f267d795c6bd72787c07e13d 494 PANTHER PTHR11699:SF210 1 492 3.0E-273 T 22-04-2016 VPUCM_RS09215 8a50c366f267d795c6bd72787c07e13d 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09215 8a50c366f267d795c6bd72787c07e13d 494 Pfam PF00171 Aldehyde dehydrogenase family 33 487 3.2E-174 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09215 8a50c366f267d795c6bd72787c07e13d 494 PANTHER PTHR11699 1 492 3.0E-273 T 22-04-2016 VPUCM_RS09215 8a50c366f267d795c6bd72787c07e13d 494 Gene3D G3DSA:3.40.605.10 18 278 1.1E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09215 8a50c366f267d795c6bd72787c07e13d 494 Gene3D G3DSA:3.40.309.10 279 463 1.5E-71 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS05040 3b9273a56f2ff3e4f9065e49c34fcf7d 414 PANTHER PTHR10617:SF113 7 410 1.9E-122 T 22-04-2016 VPUCM_RS05040 3b9273a56f2ff3e4f9065e49c34fcf7d 414 Pfam PF01494 FAD binding domain 7 164 1.4E-15 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VPUCM_RS05040 3b9273a56f2ff3e4f9065e49c34fcf7d 414 SUPERFAMILY SSF51905 285 388 2.72E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05040 3b9273a56f2ff3e4f9065e49c34fcf7d 414 SUPERFAMILY SSF51905 4 175 2.72E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05040 3b9273a56f2ff3e4f9065e49c34fcf7d 414 PANTHER PTHR10617 7 410 1.9E-122 T 22-04-2016 VPUCM_RS05040 3b9273a56f2ff3e4f9065e49c34fcf7d 414 Gene3D G3DSA:3.50.50.60 281 324 1.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05040 3b9273a56f2ff3e4f9065e49c34fcf7d 414 Gene3D G3DSA:3.50.50.60 2 180 1.9E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS01735 5ea2e4634cd4514dc6311f04698f9f51 322 Pfam PF16868 NMT1-like family 30 319 1.8E-97 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VPUCM_RS01735 5ea2e4634cd4514dc6311f04698f9f51 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 2.0E-113 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VPUCM_RS01735 5ea2e4634cd4514dc6311f04698f9f51 322 Gene3D G3DSA:3.40.190.10 118 250 2.0E-35 T 22-04-2016 VPUCM_RS01735 5ea2e4634cd4514dc6311f04698f9f51 322 SUPERFAMILY SSF53850 25 321 3.26E-88 T 22-04-2016 VPUCM_RS01735 5ea2e4634cd4514dc6311f04698f9f51 322 PANTHER PTHR30024 1 322 1.6E-117 T 22-04-2016 VPUCM_RS01735 5ea2e4634cd4514dc6311f04698f9f51 322 Gene3D G3DSA:3.40.190.10 251 320 2.3E-67 T 22-04-2016 VPUCM_RS01735 5ea2e4634cd4514dc6311f04698f9f51 322 Gene3D G3DSA:3.40.190.10 25 108 2.3E-67 T 22-04-2016 VPUCM_RS01735 5ea2e4634cd4514dc6311f04698f9f51 322 PANTHER PTHR30024:SF13 1 322 1.6E-117 T 22-04-2016 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 Pfam PF00231 ATP synthase 5 287 7.2E-93 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:3.40.1380.10 64 191 9.6E-45 T 22-04-2016 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 PANTHER PTHR11693 1 288 1.5E-130 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:1.10.287.80 237 283 6.1E-30 T 22-04-2016 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.835 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 SUPERFAMILY SSF52943 2 288 3.14E-96 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 8.2E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 8.2E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 8.2E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 8.2E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.2E-111 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:1.10.287.80 19 60 1.5E-39 T 22-04-2016 VPUCM_RS16015 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:1.10.287.80 203 236 1.5E-39 T 22-04-2016 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 53 3.53E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 180 234 3.53E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.1E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 245 329 7.2E-38 T 22-04-2016 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 22-04-2016 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:2.170.120.12 58 178 7.8E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 5.6E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 PANTHER PTHR32108 1 330 6.0E-154 T 22-04-2016 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 PANTHER PTHR32108:SF0 1 330 6.0E-154 T 22-04-2016 VPUCM_RS01555 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 9 57 1.7E-10 T 22-04-2016 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SMART SM01058 479 576 5.0E-53 T 22-04-2016 IPR003711 CarD-like/TRCF domain VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 PANTHER PTHR14025:SF21 384 1152 0.0 T 22-04-2016 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SMART SM00490 826 910 5.4E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 8.2E-21 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SMART SM00487 600 790 1.9E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 8.7E-26 T 22-04-2016 IPR003711 CarD-like/TRCF domain VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SUPERFAMILY SSF52540 782 990 5.97E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 Gene3D G3DSA:3.40.50.300 591 786 2.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SMART SM00982 1008 1108 8.0E-47 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SUPERFAMILY SSF143517 995 1147 2.88E-43 T 22-04-2016 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 Pfam PF03461 TRCF domain 1009 1101 1.2E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 Gene3D G3DSA:3.30.2060.10 132 207 9.7E-16 T 22-04-2016 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1110 28.995 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SUPERFAMILY SSF52540 11 342 3.19E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 3.5E-17 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SUPERFAMILY SSF52540 523 783 1.56E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SUPERFAMILY SSF141259 470 548 5.23E-25 T 22-04-2016 IPR003711 CarD-like/TRCF domain VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 PANTHER PTHR14025 384 1152 0.0 T 22-04-2016 VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 Gene3D G3DSA:3.40.50.300 789 963 3.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05490 1f8cc3e68a81250d63c04070e053e5a9 1153 SUPERFAMILY SSF52540 351 466 2.02E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01495 e0ef5f4d50981bb362db9bc1c5633f3f 101 SUPERFAMILY SSF57716 2 101 7.06E-37 T 22-04-2016 VPUCM_RS01495 e0ef5f4d50981bb362db9bc1c5633f3f 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.2E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01495 e0ef5f4d50981bb362db9bc1c5633f3f 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid VPUCM_RS01495 e0ef5f4d50981bb362db9bc1c5633f3f 101 PANTHER PTHR19836 1 101 2.4E-59 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01495 e0ef5f4d50981bb362db9bc1c5633f3f 101 Gene3D G3DSA:4.10.830.10 41 101 1.1E-29 T 22-04-2016 VPUCM_RS01495 e0ef5f4d50981bb362db9bc1c5633f3f 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 VPUCM_RS00505 e1e5a64146141fa7e03c69e5c0775509 544 Pfam PF03109 ABC1 family 112 230 3.6E-36 T 22-04-2016 IPR004147 UbiB domain VPUCM_RS00505 e1e5a64146141fa7e03c69e5c0775509 544 PANTHER PTHR10566:SF79 1 458 2.9E-284 T 22-04-2016 VPUCM_RS00505 e1e5a64146141fa7e03c69e5c0775509 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.65 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VPUCM_RS00505 e1e5a64146141fa7e03c69e5c0775509 544 PANTHER PTHR10566 1 458 2.9E-284 T 22-04-2016 VPUCM_RS00505 e1e5a64146141fa7e03c69e5c0775509 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 4.4E-176 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VPUCM_RS00505 e1e5a64146141fa7e03c69e5c0775509 544 SUPERFAMILY SSF56112 94 158 1.3E-46 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS00505 e1e5a64146141fa7e03c69e5c0775509 544 SUPERFAMILY SSF56112 193 436 1.3E-46 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 SUPERFAMILY SSF53335 108 229 4.17E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 SUPERFAMILY SSF109604 437 771 1.44E-56 T 22-04-2016 VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 PANTHER PTHR11373 388 578 2.0E-44 T 22-04-2016 VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 Gene3D G3DSA:1.10.3210.10 440 669 1.3E-53 T 22-04-2016 IPR006674 HD domain VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 Gene3D G3DSA:1.10.3210.10 822 840 1.3E-53 T 22-04-2016 IPR006674 HD domain VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 Gene3D G3DSA:1.10.3210.10 722 757 1.3E-53 T 22-04-2016 IPR006674 HD domain VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 169 175 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 Pfam PF10237 Probable N6-adenine methyltransferase 81 200 1.6E-13 T 22-04-2016 IPR019369 Protein-lysine N-methyltransferase Efm5 GO:0008168 VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 SMART SM00471 473 633 1.0E-9 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 440 840 6.8E-53 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 Gene3D G3DSA:3.40.50.150 104 201 5.1E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 Pfam PF01966 HD domain 477 622 3.1E-13 T 22-04-2016 IPR006674 HD domain VPUCM_RS24150 1137e3864286ae313a69c7b5f124b5a7 842 PANTHER PTHR11373:SF25 388 578 2.0E-44 T 22-04-2016 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 Pfam PF00561 alpha/beta hydrolase fold 23 254 9.3E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 SUPERFAMILY SSF53474 1 268 7.51E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.23E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.23E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 1.23E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 1.23E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PANTHER PTHR10992:SF885 6 268 9.9E-103 T 22-04-2016 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PANTHER PTHR10992 6 268 9.9E-103 T 22-04-2016 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 Gene3D G3DSA:3.40.50.1820 1 267 2.3E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 5.68E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 5.68E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS02025 e2ed081a3e1080eda3840ed5c5d4f496 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 5.68E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 Pfam PF00120 Glutamine synthetase, catalytic domain 117 442 6.7E-85 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 SUPERFAMILY SSF55931 116 444 1.18E-86 T 22-04-2016 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 Gene3D G3DSA:3.10.20.70 17 110 1.4E-6 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 SUPERFAMILY SSF54368 16 108 4.32E-7 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 Gene3D G3DSA:3.30.590.10 117 434 1.0E-80 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 SMART SM01230 113 370 1.2E-81 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 PANTHER PTHR20852:SF7 6 444 2.2E-89 T 22-04-2016 VPUCM_RS09230 6237e3c52134a684ff23a903399d1438 447 PANTHER PTHR20852 6 444 2.2E-89 T 22-04-2016 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 6 119 1.0E-30 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 57 67 1.9E-9 T 22-04-2016 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 108 119 1.9E-9 T 22-04-2016 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 35 46 1.9E-9 T 22-04-2016 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 Gene3D G3DSA:3.40.50.1000 37 119 6.3E-24 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 Pfam PF00702 haloacid dehalogenase-like hydrolase 5 119 3.2E-25 T 22-04-2016 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 PANTHER PTHR24093:SF317 6 118 1.1E-38 T 22-04-2016 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 PANTHER PTHR24093 6 118 1.1E-38 T 22-04-2016 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 Gene3D G3DSA:3.40.1110.10 6 36 5.5E-8 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VPUCM_RS21350 d43c65bf837e1b3b0de6d657d1632e09 119 SUPERFAMILY SSF56784 23 119 1.54E-22 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS06475 ca510695123bf04a910385f57feb76ca 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VPUCM_RS06475 ca510695123bf04a910385f57feb76ca 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 2.2E-49 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VPUCM_RS06475 ca510695123bf04a910385f57feb76ca 377 PANTHER PTHR23409 197 377 1.8E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VPUCM_RS06475 ca510695123bf04a910385f57feb76ca 377 PANTHER PTHR23409 1 173 1.8E-270 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VPUCM_RS06475 ca510695123bf04a910385f57feb76ca 377 Gene3D G3DSA:1.10.620.20 3 341 1.4E-123 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 VPUCM_RS06475 ca510695123bf04a910385f57feb76ca 377 SUPERFAMILY SSF47240 3 341 7.73E-112 T 22-04-2016 IPR009078 Ferritin-like superfamily VPUCM_RS06475 ca510695123bf04a910385f57feb76ca 377 PANTHER PTHR23409:SF23 197 377 1.8E-270 T 22-04-2016 VPUCM_RS06475 ca510695123bf04a910385f57feb76ca 377 PANTHER PTHR23409:SF23 1 173 1.8E-270 T 22-04-2016 VPUCM_RS08855 8f66b2e7d97d954d5983028d5d7d67d6 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS08855 8f66b2e7d97d954d5983028d5d7d67d6 506 Gene3D G3DSA:3.40.605.10 16 293 2.2E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS08855 8f66b2e7d97d954d5983028d5d7d67d6 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 4.1E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS08855 8f66b2e7d97d954d5983028d5d7d67d6 506 SUPERFAMILY SSF53720 13 497 3.27E-162 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS08855 8f66b2e7d97d954d5983028d5d7d67d6 506 Gene3D G3DSA:3.40.309.10 294 470 3.9E-61 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS08855 8f66b2e7d97d954d5983028d5d7d67d6 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 VPUCM_RS08855 8f66b2e7d97d954d5983028d5d7d67d6 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS08855 8f66b2e7d97d954d5983028d5d7d67d6 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 VPUCM_RS05460 476e23932954f05f43da436b97f935fd 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 9 185 5.5E-65 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB VPUCM_RS05460 476e23932954f05f43da436b97f935fd 196 PANTHER PTHR40593 1 196 6.1E-96 T 22-04-2016 VPUCM_RS05460 476e23932954f05f43da436b97f935fd 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 3.5E-74 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB VPUCM_RS05460 476e23932954f05f43da436b97f935fd 196 Gene3D G3DSA:3.30.1830.10 17 50 7.6E-4 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 Gene3D G3DSA:3.40.50.300 294 559 8.4E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 141 8.8E-17 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 Pfam PF00437 Type II/IV secretion system protein 188 455 7.1E-85 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 2.7E-238 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 PANTHER PTHR30258 4 561 3.8E-247 T 22-04-2016 VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 SUPERFAMILY SSF52540 175 558 1.83E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 Gene3D G3DSA:3.30.450.90 170 288 1.2E-49 T 22-04-2016 VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 SUPERFAMILY SSF160246 1 140 6.28E-32 T 22-04-2016 VPUCM_RS13035 1a88f3ce815c485c9a95d9e8b8c0fad4 561 PANTHER PTHR30258:SF1 4 561 3.8E-247 T 22-04-2016 VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 PANTHER PTHR24221:SF256 6 580 6.6E-221 T 22-04-2016 VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 Gene3D G3DSA:3.40.50.300 337 585 3.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 SUPERFAMILY SSF52540 332 571 4.74E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 Pfam PF00005 ABC transporter 353 501 1.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 Gene3D G3DSA:1.20.1560.10 7 322 4.1E-75 T 22-04-2016 VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 SUPERFAMILY SSF90123 8 327 1.83E-71 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 Pfam PF00664 ABC transporter transmembrane region 22 291 3.0E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 SMART SM00382 362 547 5.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS07760 3e2d97ed7de379e63c8789921ce88d05 592 PANTHER PTHR24221 6 580 6.6E-221 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PANTHER PTHR11922:SF7 1 195 4.7E-94 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 SUPERFAMILY SSF52317 1 191 1.65E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.8E-85 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 Gene3D G3DSA:3.40.50.880 2 191 7.5E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PANTHER PTHR11922 1 195 4.7E-94 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 5.2E-54 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.4E-5 T 22-04-2016 VPUCM_RS14615 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.4E-5 T 22-04-2016 VPUCM_RS14060 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 PANTHER PTHR11746 122 186 3.0E-15 T 22-04-2016 VPUCM_RS14060 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.755 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPUCM_RS14060 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Gene3D G3DSA:3.90.950.10 5 188 1.1E-69 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VPUCM_RS14060 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Pfam PF02545 Maf-like protein 7 187 1.5E-60 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPUCM_RS14060 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 5.9E-55 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPUCM_RS14060 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 SUPERFAMILY SSF52972 5 187 5.3E-63 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VPUCM_RS14060 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 PIRSF PIRSF006305 2 189 3.4E-57 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPUCM_RS06930 4e5edb072b704c255372be55419a8385 208 PANTHER PTHR30086 2 208 1.9E-42 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS06930 4e5edb072b704c255372be55419a8385 208 PIRSF PIRSF006324 1 207 3.5E-47 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS06930 4e5edb072b704c255372be55419a8385 208 Pfam PF01810 LysE type translocator 16 204 1.6E-26 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS06930 4e5edb072b704c255372be55419a8385 208 PANTHER PTHR30086:SF3 2 208 1.9E-42 T 22-04-2016 VPUCM_RS04075 33f7e354152768d20931f780f51e97d6 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 1.1E-37 T 22-04-2016 IPR019305 Uncharacterised protein family Smp VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 7.5E-57 T 22-04-2016 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF52540 5 211 2.18E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.30.70.240 404 482 1.1E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.30.70.870 308 403 2.5E-39 T 22-04-2016 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 PANTHER PTHR23115 1 597 2.4E-298 T 22-04-2016 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.40.50.300 7 209 2.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 3.0E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 PANTHER PTHR23115:SF14 1 597 2.4E-298 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:2.40.50.250 487 581 1.3E-39 T 22-04-2016 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF54980 402 516 2.83E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 5.2E-294 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.6E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF50447 155 303 4.16E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:2.40.30.10 210 307 1.1E-26 T 22-04-2016 VPUCM_RS00610 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 3.3E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PANTHER PTHR30477 4 275 1.7E-70 T 22-04-2016 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 Gene3D G3DSA:3.40.50.1980 181 291 3.4E-26 T 22-04-2016 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PRINTS PR00690 Adhesin family signature 179 200 5.1E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PRINTS PR00690 Adhesin family signature 50 63 5.1E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PRINTS PR00690 Adhesin family signature 63 80 5.1E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PRINTS PR00690 Adhesin family signature 232 250 5.1E-9 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 1.2E-59 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 SUPERFAMILY SSF53807 12 290 7.36E-75 T 22-04-2016 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PRINTS PR00691 Adhesin B signature 63 82 5.9E-5 T 22-04-2016 IPR006129 Adhesin B GO:0007155 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PRINTS PR00691 Adhesin B signature 44 62 5.9E-5 T 22-04-2016 IPR006129 Adhesin B GO:0007155 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PRINTS PR00691 Adhesin B signature 123 142 5.9E-5 T 22-04-2016 IPR006129 Adhesin B GO:0007155 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 Gene3D G3DSA:3.40.50.1980 17 180 1.9E-45 T 22-04-2016 VPUCM_RS04815 d39ff3d8e026507f290d518bab462b51 292 PANTHER PTHR30477:SF1 4 275 1.7E-70 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Gene3D G3DSA:3.40.50.740 159 261 7.4E-28 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Gene3D G3DSA:3.40.50.740 619 688 7.4E-28 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Gene3D G3DSA:3.40.50.740 720 739 7.4E-28 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 SUPERFAMILY SSF50692 881 1003 5.2E-22 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Gene3D G3DSA:3.40.228.10 469 569 6.0E-41 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Gene3D G3DSA:3.40.228.10 262 379 6.0E-41 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Gene3D G3DSA:2.20.25.90 71 158 7.1E-12 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 SMART SM00926 72 154 3.2E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615:SF136 126 391 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615:SF136 71 106 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615:SF136 558 765 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615:SF136 802 1029 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615:SF136 410 494 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 SUPERFAMILY SSF53706 69 111 1.93E-115 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 SUPERFAMILY SSF53706 138 882 1.93E-115 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 697 1.5E-22 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Gene3D G3DSA:2.40.40.20 864 1030 4.2E-25 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615 126 391 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615 71 106 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615 558 765 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615 802 1029 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 PANTHER PTHR11615 410 494 1.7E-141 T 22-04-2016 VPUCM_RS10370 f07244857e71469a2c7fac9fc845ca2a 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 904 997 6.7E-11 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VPUCM_RS03480 17c33db8d7c9f5bcbb717c5c77b51f43 167 SUPERFAMILY SSF55729 1 127 5.48E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS03480 17c33db8d7c9f5bcbb717c5c77b51f43 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 2.0E-9 T 22-04-2016 VPUCM_RS03480 17c33db8d7c9f5bcbb717c5c77b51f43 167 PANTHER PTHR23091:SF237 1 164 3.5E-24 T 22-04-2016 VPUCM_RS03480 17c33db8d7c9f5bcbb717c5c77b51f43 167 Gene3D G3DSA:3.40.630.30 1 125 6.0E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS03480 17c33db8d7c9f5bcbb717c5c77b51f43 167 PANTHER PTHR23091 1 164 3.5E-24 T 22-04-2016 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 1.0E-48 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.1E-159 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 PANTHER PTHR10515 5 441 4.5E-214 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 SUPERFAMILY SSF52418 73 334 1.7E-88 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 SUPERFAMILY SSF54680 337 437 7.72E-29 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 438 51.162 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 Gene3D G3DSA:3.40.1030.10 76 338 1.1E-108 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.5E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 Gene3D G3DSA:3.90.1170.30 339 432 5.7E-33 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 Gene3D G3DSA:1.20.970.10 2 67 1.8E-29 T 22-04-2016 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 SMART SM00941 350 424 2.3E-28 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 2.9E-214 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 PIRSF PIRSF000478 1 438 5.8E-149 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 PANTHER PTHR10515:SF0 5 441 4.5E-214 T 22-04-2016 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 9.8E-24 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VPUCM_RS04060 96da846fbb392864a5b9dfd6ba38410a 442 SUPERFAMILY SSF47648 2 70 1.14E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 PANTHER PTHR11014:SF106 1 376 8.4E-93 T 22-04-2016 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.1E-178 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 SUPERFAMILY SSF55031 181 291 2.69E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 9.6E-46 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.115 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 Pfam PF07687 Peptidase dimerisation domain 177 284 3.8E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 SUPERFAMILY SSF53187 6 180 1.49E-67 T 22-04-2016 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 SUPERFAMILY SSF53187 294 376 1.49E-67 T 22-04-2016 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 PANTHER PTHR11014 1 376 8.4E-93 T 22-04-2016 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 Gene3D G3DSA:3.40.630.10 4 189 2.3E-75 T 22-04-2016 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 Gene3D G3DSA:3.40.630.10 318 376 2.3E-75 T 22-04-2016 VPUCM_RS11690 56824047e3732902e67107009d20a3c5 378 Gene3D G3DSA:3.30.70.360 190 290 1.5E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 SUPERFAMILY SSF52172 1026 1142 1.05E-19 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 Gene3D G3DSA:1.10.287.130 786 849 1.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 Gene3D G3DSA:3.40.50.2300 1025 1142 1.5E-18 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 SUPERFAMILY SSF55785 626 741 1.74E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 Gene3D G3DSA:3.30.565.10 854 1006 5.4E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 2.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 SUPERFAMILY SSF55874 843 1002 7.6E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 SMART SM00388 788 853 8.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 Gene3D G3DSA:3.30.450.20 626 741 5.6E-14 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PANTHER PTHR24423:SF439 626 760 4.8E-229 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PANTHER PTHR24423:SF439 179 198 4.8E-229 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PANTHER PTHR24423:SF439 9 60 4.8E-229 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PANTHER PTHR24423:SF439 786 1141 4.8E-229 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 SMART SM00387 897 1006 5.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 SMART SM00448 1026 1139 1.3E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 SUPERFAMILY SSF47384 774 854 2.75E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1005 3.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 3.1E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PANTHER PTHR24423 626 760 4.8E-229 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PANTHER PTHR24423 179 198 4.8E-229 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PANTHER PTHR24423 9 60 4.8E-229 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 PANTHER PTHR24423 786 1141 4.8E-229 T 22-04-2016 VPUCM_RS15035 c4d5ad4cfc2846dbf5206ab479ac33c2 1143 Pfam PF12860 PAS fold 634 748 8.0E-44 T 22-04-2016 VPUCM_RS09880 474c6559275e3cbc79cfda229e702876 383 Gene3D G3DSA:1.20.1530.10 5 379 1.6E-152 T 22-04-2016 IPR023171 Na/H antiporter domain VPUCM_RS09880 474c6559275e3cbc79cfda229e702876 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.3E-194 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VPUCM_RS09880 474c6559275e3cbc79cfda229e702876 383 PANTHER PTHR30341 1 383 3.3E-197 T 22-04-2016 VPUCM_RS09880 474c6559275e3cbc79cfda229e702876 383 PANTHER PTHR30341:SF0 1 383 3.3E-197 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VPUCM_RS09880 474c6559275e3cbc79cfda229e702876 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.634 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VPUCM_RS09880 474c6559275e3cbc79cfda229e702876 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 2.4E-145 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 PANTHER PTHR11252 2 711 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:1.10.10.400 227 314 5.5E-27 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 SMART SM00322 553 618 3.6E-11 T 22-04-2016 IPR004087 K Homology domain GO:0003676 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF55666 146 236 1.33E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF00575 S1 RNA binding domain 620 691 1.9E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54791 555 640 5.06E-22 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF50249 621 704 2.4E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF00013 KH domain 558 615 1.9E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.230.70 315 543 1.3E-87 T 22-04-2016 IPR027408 PNPase/RNase PH domain VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.230.70 3 225 1.7E-80 T 22-04-2016 IPR027408 PNPase/RNase PH domain VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54211 293 489 1.16E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 PIRSF PIRSF005499 2 711 1.1E-296 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 SMART SM00316 621 691 3.3E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.8E-24 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:2.40.50.140 619 694 1.3E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 1.9E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.1370.10 553 618 5.1E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.135 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 PANTHER PTHR11252:SF0 2 711 0.0 T 22-04-2016 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF55666 451 549 3.23E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54211 5 145 5.57E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 3.8E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VPUCM_RS03440 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 4.3E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VPUCM_RS15585 47b95659dc49afbc63831932d6ecf8e2 104 SUPERFAMILY SSF55387 1 103 6.63E-39 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VPUCM_RS15585 47b95659dc49afbc63831932d6ecf8e2 104 PANTHER PTHR16821 1 103 2.1E-36 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VPUCM_RS15585 47b95659dc49afbc63831932d6ecf8e2 104 Gene3D G3DSA:3.30.920.10 1 103 1.7E-34 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VPUCM_RS15585 47b95659dc49afbc63831932d6ecf8e2 104 Pfam PF01491 Frataxin-like domain 1 100 5.6E-30 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VPUCM_RS15585 47b95659dc49afbc63831932d6ecf8e2 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 22-04-2016 IPR020895 Frataxin conserved site VPUCM_RS15585 47b95659dc49afbc63831932d6ecf8e2 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.46 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VPUCM_RS15585 47b95659dc49afbc63831932d6ecf8e2 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 1.6E-42 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VPUCM_RS15585 47b95659dc49afbc63831932d6ecf8e2 104 SMART SM01219 1 104 4.5E-55 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VPUCM_RS08800 3d9f2b1cf7a2ea7a894ceb815217c11d 119 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 3.4E-52 T 22-04-2016 IPR013348 Type III secretion system YscG GO:0009405 VPUCM_RS08800 3d9f2b1cf7a2ea7a894ceb815217c11d 119 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 1.4E-53 T 22-04-2016 IPR013348 Type III secretion system YscG GO:0009405 VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.7E-70 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 Gene3D G3DSA:3.40.1280.10 1 160 2.1E-68 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 PIRSF PIRSF000386 1 246 8.9E-101 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 SUPERFAMILY SSF75217 1 245 2.09E-102 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 PANTHER PTHR32125 1 228 6.2E-120 T 22-04-2016 VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 Gene3D G3DSA:1.10.1270.20 163 244 2.9E-35 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 PANTHER PTHR32125:SF1 1 228 6.2E-120 T 22-04-2016 VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.9 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VPUCM_RS13070 5ec8eeacaae861cc2988db23d3c7136b 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 2.3E-109 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 3.4E-151 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 PANTHER PTHR14359 2 399 5.8E-195 T 22-04-2016 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 Gene3D G3DSA:3.40.50.1950 2 185 1.9E-64 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 SUPERFAMILY SSF102645 184 398 4.71E-78 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 371 8.3E-75 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 Pfam PF02441 Flavoprotein 7 135 3.5E-31 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 Gene3D G3DSA:3.40.50.10300 186 398 1.2E-86 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 SUPERFAMILY SSF52507 1 182 2.09E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VPUCM_RS00935 45853104617d2b3390f5b4beaa740afa 399 PANTHER PTHR14359:SF20 2 399 5.8E-195 T 22-04-2016 VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 6.1E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 7.1E-61 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 PANTHER PTHR18901 1 224 1.5E-71 T 22-04-2016 VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 SUPERFAMILY SSF56784 5 224 9.69E-62 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 PANTHER PTHR18901:SF14 1 224 1.5E-71 T 22-04-2016 VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 Gene3D G3DSA:1.10.150.240 34 89 1.1E-23 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 1.6E-39 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 Gene3D G3DSA:3.40.50.1000 3 33 4.6E-46 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 Gene3D G3DSA:3.40.50.1000 96 224 4.6E-46 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.554 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 194 4.1E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS14635 52bfa85cf539db597865619718ca7881 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 89 193 4.0E-14 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VPUCM_RS00740 8aa1489b15de85fa57336b8c287d24e9 255 PANTHER PTHR10992 4 255 1.1E-106 T 22-04-2016 VPUCM_RS00740 8aa1489b15de85fa57336b8c287d24e9 255 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 252 7.0E-102 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VPUCM_RS00740 8aa1489b15de85fa57336b8c287d24e9 255 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 44.851 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VPUCM_RS00740 8aa1489b15de85fa57336b8c287d24e9 255 Gene3D G3DSA:3.40.50.1820 3 253 1.3E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS00740 8aa1489b15de85fa57336b8c287d24e9 255 SUPERFAMILY SSF53474 3 252 7.1E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS00740 8aa1489b15de85fa57336b8c287d24e9 255 PANTHER PTHR10992:SF812 4 255 1.1E-106 T 22-04-2016 VPUCM_RS00740 8aa1489b15de85fa57336b8c287d24e9 255 Pfam PF00561 alpha/beta hydrolase fold 16 241 5.2E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 Pfam PF00106 short chain dehydrogenase 4 183 3.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 PANTHER PTHR24322 7 174 2.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 SUPERFAMILY SSF51735 3 236 1.03E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 3.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 3.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 3.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS06040 8592edb60a35f76a39fdfb980ae7eb5d 241 Gene3D G3DSA:3.40.50.720 2 191 2.8E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:3.30.1360.40 80 154 4.5E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 2.0E-20 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 7.8E-22 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 PANTHER PTHR34471 2 156 1.3E-64 T 22-04-2016 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF46785 3 77 3.36E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 8.4E-24 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.7E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.7E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.7E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.7E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 5.4E-44 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:1.10.10.10 2 77 9.7E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 PANTHER PTHR34471:SF1 2 156 1.3E-64 T 22-04-2016 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VPUCM_RS01740 077711d03c0050bada1b5a44f0618de8 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.828 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VPUCM_RS01325 f734bcd8ea6bd3d9786032ccc3222f3e 752 PANTHER PTHR22916 215 432 2.0E-43 T 22-04-2016 VPUCM_RS01325 f734bcd8ea6bd3d9786032ccc3222f3e 752 SUPERFAMILY SSF53448 217 436 4.95E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01325 f734bcd8ea6bd3d9786032ccc3222f3e 752 SUPERFAMILY SSF53448 641 729 3.66E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01325 f734bcd8ea6bd3d9786032ccc3222f3e 752 SUPERFAMILY SSF53448 477 603 3.66E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01325 f734bcd8ea6bd3d9786032ccc3222f3e 752 Gene3D G3DSA:3.90.550.10 478 693 3.2E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01325 f734bcd8ea6bd3d9786032ccc3222f3e 752 Gene3D G3DSA:3.90.550.10 217 440 7.2E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01325 f734bcd8ea6bd3d9786032ccc3222f3e 752 Pfam PF00535 Glycosyl transferase family 2 483 659 4.6E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS01325 f734bcd8ea6bd3d9786032ccc3222f3e 752 Pfam PF00535 Glycosyl transferase family 2 220 377 4.0E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 Gene3D G3DSA:3.30.70.270 321 486 4.0E-55 T 22-04-2016 VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SMART SM00267 308 481 1.4E-61 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 PANTHER PTHR10799 207 591 1.6E-66 T 22-04-2016 VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 Gene3D G3DSA:3.20.20.450 498 746 4.4E-84 T 22-04-2016 IPR001633 EAL domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SUPERFAMILY SSF141868 497 747 4.45E-81 T 22-04-2016 IPR001633 EAL domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 315 481 9.3E-42 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SUPERFAMILY SSF55785 52 184 1.55E-16 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SUPERFAMILY SSF55073 324 483 1.02E-48 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 Pfam PF00563 EAL domain 498 732 3.5E-65 T 22-04-2016 IPR001633 EAL domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 Pfam PF08447 PAS fold 95 175 4.6E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 Pfam PF00990 Diguanylate cyclase, GGDEF domain 319 477 4.4E-46 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SMART SM00052 491 737 5.9E-86 T 22-04-2016 IPR001633 EAL domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 199 315 4.1E-22 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 90 193 4.3E-9 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SUPERFAMILY SSF55785 200 306 8.38E-28 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SMART SM00091 67 139 3.1 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SMART SM00091 194 260 1.2E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 PANTHER PTHR10799:SF774 207 591 1.6E-66 T 22-04-2016 VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SMART SM00086 266 308 4.6E-4 T 22-04-2016 IPR001610 PAC motif VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 SMART SM00086 145 186 3.0 T 22-04-2016 IPR001610 PAC motif VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 Gene3D G3DSA:3.30.450.20 203 307 2.0E-26 T 22-04-2016 VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 Pfam PF13426 PAS domain 205 307 2.0E-16 T 22-04-2016 IPR000014 PAS domain VPUCM_RS03595 229f3c28bb1a38014a047d9d8b8c6d92 867 Gene3D G3DSA:3.30.450.20 48 196 9.6E-22 T 22-04-2016 VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 Gene3D G3DSA:3.40.50.300 3 150 6.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 PANTHER PTHR18934 3 402 3.2E-96 T 22-04-2016 VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 Pfam PF00271 Helicase conserved C-terminal domain 196 314 4.2E-14 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 Pfam PF00270 DEAD/DEAH box helicase 16 151 9.9E-9 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 SMART SM00487 2 176 1.1E-13 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 Pfam PF04408 Helicase associated domain (HA2) 373 432 1.3E-7 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 SUPERFAMILY SSF52540 18 326 9.08E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 SMART SM00847 372 460 0.0023 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 SMART SM00490 219 315 8.3E-15 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS09730 4222057501837a7d0fd272a3c8e41882 784 Gene3D G3DSA:3.40.50.300 190 326 1.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.10.20.30 402 463 6.3E-24 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 PANTHER PTHR21262 54 739 0.0 T 22-04-2016 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.30.70.260 662 736 4.9E-17 T 22-04-2016 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.30.460.10 193 339 4.2E-49 T 22-04-2016 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF02824 TGS domain 402 461 8.6E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF13328 HD domain 52 190 1.8E-35 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.8E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF81301 195 406 2.45E-62 T 22-04-2016 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 2.9E-182 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF81271 395 461 9.81E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF55021 662 737 3.57E-10 T 22-04-2016 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF13291 ACT domain 661 737 1.9E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF109604 50 205 5.96E-42 T 22-04-2016 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 SMART SM00954 250 360 8.3E-64 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VPUCM_RS13285 2ed4f879c3d44cf7b5efce869c7cbc62 739 PANTHER PTHR21262:SF5 54 739 0.0 T 22-04-2016 VPUCM_RS06710 f148ded0e7a8cd0f83c23f1f44ea8b79 199 Gene3D G3DSA:3.90.79.10 34 195 5.1E-37 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS06710 f148ded0e7a8cd0f83c23f1f44ea8b79 199 SUPERFAMILY SSF55811 31 189 9.88E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS06710 f148ded0e7a8cd0f83c23f1f44ea8b79 199 PANTHER PTHR12992 37 189 9.0E-47 T 22-04-2016 VPUCM_RS06710 f148ded0e7a8cd0f83c23f1f44ea8b79 199 Pfam PF00293 NUDIX domain 40 161 1.2E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 PANTHER PTHR11654:SF119 3 462 7.0E-179 T 22-04-2016 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 SUPERFAMILY SSF103473 7 435 3.4E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 PANTHER PTHR11654 3 462 7.0E-179 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 Gene3D G3DSA:1.20.1250.20 237 437 1.4E-9 T 22-04-2016 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 Gene3D G3DSA:1.20.1250.20 14 212 4.5E-20 T 22-04-2016 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 Pfam PF00854 POT family 85 197 4.6E-29 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 Pfam PF00854 POT family 230 405 3.9E-31 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 227 440 9.3E-47 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 215 1.2E-59 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 VPUCM_RS11905 25cd18bdbdb5bc2fdd4236c944153403 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS02430 86ac826b44c8b0ef25cf2d5ee1f1f93a 156 PIRSF PIRSF028680 1 156 1.0E-78 T 22-04-2016 IPR016895 Uncharacterised conserved protein UCP028680 VPUCM_RS02430 86ac826b44c8b0ef25cf2d5ee1f1f93a 156 Gene3D G3DSA:2.40.160.20 42 156 1.7E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS02430 86ac826b44c8b0ef25cf2d5ee1f1f93a 156 SUPERFAMILY SSF56935 29 150 2.47E-6 T 22-04-2016 VPUCM_RS08130 c12f2f12aaf44d6a730f9b0be444291c 297 PANTHER PTHR11807 7 280 4.8E-109 T 22-04-2016 VPUCM_RS08130 c12f2f12aaf44d6a730f9b0be444291c 297 Gene3D G3DSA:3.40.50.620 21 205 1.2E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS08130 c12f2f12aaf44d6a730f9b0be444291c 297 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 8 269 56.371 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VPUCM_RS08130 c12f2f12aaf44d6a730f9b0be444291c 297 SUPERFAMILY SSF52402 15 233 7.68E-54 T 22-04-2016 VPUCM_RS08130 c12f2f12aaf44d6a730f9b0be444291c 297 PANTHER PTHR11807:SF16 7 280 4.8E-109 T 22-04-2016 VPUCM_RS08130 c12f2f12aaf44d6a730f9b0be444291c 297 PIRSF PIRSF004976 2 282 2.9E-70 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VPUCM_RS08130 c12f2f12aaf44d6a730f9b0be444291c 297 Pfam PF01171 PP-loop family 41 203 4.3E-16 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VPUCM_RS12595 d934821bbfb91a1ecd91c93a3af29b26 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 2.6E-69 T 22-04-2016 IPR009948 Syd GO:0009898 VPUCM_RS12595 d934821bbfb91a1ecd91c93a3af29b26 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.194 T 22-04-2016 IPR009948 Syd GO:0009898 VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 PANTHER PTHR11938 1 80 2.8E-46 T 22-04-2016 VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 SUPERFAMILY SSF54862 3 96 1.24E-22 T 22-04-2016 VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.0E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 PANTHER PTHR11938:SF101 1 80 2.8E-46 T 22-04-2016 VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 1.0E-16 T 22-04-2016 IPR022569 Ferredoxin, C-terminal VPUCM_RS05410 6e653d5b8449cac98c986c2c8470eee8 107 Gene3D G3DSA:3.30.70.20 3 103 1.9E-20 T 22-04-2016 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 SUPERFAMILY SSF48150 3 223 3.45E-74 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 1.4E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 270 1.9E-125 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 SMART SM00525 189 209 1.2E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 9.4E-22 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 SUPERFAMILY SSF55811 218 353 4.35E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 PANTHER PTHR10359 1 347 3.6E-103 T 22-04-2016 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 Gene3D G3DSA:3.90.79.10 228 353 1.5E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 Pfam PF00633 Helix-hairpin-helix motif 98 125 1.3E-5 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 Gene3D G3DSA:1.10.340.30 20 119 1.5E-42 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 SMART SM00478 37 188 2.0E-44 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 Pfam PF14815 NUDIX domain 243 352 8.4E-21 T 22-04-2016 IPR029119 MutY, C-terminal VPUCM_RS13575 d7e5cb12f81424faf8eab00b29ed2a67 358 Gene3D G3DSA:1.10.1670.10 120 222 2.0E-39 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VPUCM_RS13960 df9a2bc7d621f9afe0f7022d369a0ed6 187 PANTHER PTHR37481 1 183 1.2E-44 T 22-04-2016 VPUCM_RS13960 df9a2bc7d621f9afe0f7022d369a0ed6 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.1E-47 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VPUCM_RS13960 df9a2bc7d621f9afe0f7022d369a0ed6 187 PIRSF PIRSF028513 2 185 2.6E-28 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VPUCM_RS13960 df9a2bc7d621f9afe0f7022d369a0ed6 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.4E-45 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related VPUCM_RS13960 df9a2bc7d621f9afe0f7022d369a0ed6 187 PANTHER PTHR37481:SF1 1 183 1.2E-44 T 22-04-2016 VPUCM_RS13960 df9a2bc7d621f9afe0f7022d369a0ed6 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.495 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VPUCM_RS13390 3ffdc54628a9a361b7228117933c7e51 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 5.6E-36 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VPUCM_RS13390 3ffdc54628a9a361b7228117933c7e51 192 SUPERFAMILY SSF101327 6 178 4.18E-46 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VPUCM_RS13390 3ffdc54628a9a361b7228117933c7e51 192 PANTHER PTHR37528 1 192 9.5E-41 T 22-04-2016 VPUCM_RS13390 3ffdc54628a9a361b7228117933c7e51 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 33.015 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 PIRSF PIRSF003165 1 162 8.1E-59 T 22-04-2016 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 155 4.4E-44 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 73 95 5.16E-34 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 105 127 5.16E-34 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 24 47 5.16E-34 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 49 68 5.16E-34 T 22-04-2016 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 Pfam PF07720 Tetratricopeptide repeat 39 70 2.9E-7 T 22-04-2016 IPR011716 Tetratricopeptide TPR-3 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 Pfam PF07720 Tetratricopeptide repeat 77 98 0.11 T 22-04-2016 IPR011716 Tetratricopeptide TPR-3 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 Gene3D G3DSA:1.25.40.10 36 147 2.6E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS08635 b6134f7d23d6deda7a956a3f6d0d027e 162 SUPERFAMILY SSF48452 27 148 5.69E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 Gene3D G3DSA:3.40.50.300 310 540 9.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 Gene3D G3DSA:3.40.50.300 1 264 1.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 SUPERFAMILY SSF52540 277 494 8.77E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 SMART SM00382 26 223 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 SMART SM00382 337 503 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 Pfam PF12848 ABC transporter 217 294 2.9E-27 T 22-04-2016 IPR032781 ABC-transporter extension domain VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 PANTHER PTHR19211 1 557 0.0 T 22-04-2016 VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 Pfam PF00005 ABC transporter 17 178 5.7E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 Pfam PF00005 ABC transporter 328 459 3.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 PANTHER PTHR19211:SF49 1 557 0.0 T 22-04-2016 VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 SUPERFAMILY SSF52540 119 258 1.39E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14565 1e3704668ac4e94c7b16c1d13e33aff2 639 SUPERFAMILY SSF52540 2 92 1.39E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01260 c1162a45fb061346809978cc9382f3c6 648 SUPERFAMILY SSF48452 174 300 8.01E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS01260 c1162a45fb061346809978cc9382f3c6 648 SMART SM00028 272 305 1.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS01260 c1162a45fb061346809978cc9382f3c6 648 SMART SM00028 238 271 43.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS01260 c1162a45fb061346809978cc9382f3c6 648 SMART SM00028 171 204 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS01260 c1162a45fb061346809978cc9382f3c6 648 Gene3D G3DSA:1.25.40.10 173 302 3.8E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS01260 c1162a45fb061346809978cc9382f3c6 648 Gene3D G3DSA:1.25.40.10 607 639 3.8E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS05670 27674b33b39416673eecd4027fe2283a 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 103 124 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site VPUCM_RS05670 27674b33b39416673eecd4027fe2283a 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 477 7.6E-95 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VPUCM_RS05670 27674b33b39416673eecd4027fe2283a 557 Gene3D G3DSA:3.40.190.10 174 325 1.7E-56 T 22-04-2016 VPUCM_RS05670 27674b33b39416673eecd4027fe2283a 557 PIRSF PIRSF002741 4 557 2.4E-117 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VPUCM_RS05670 27674b33b39416673eecd4027fe2283a 557 SUPERFAMILY SSF53850 55 545 4.34E-149 T 22-04-2016 VPUCM_RS05670 27674b33b39416673eecd4027fe2283a 557 Gene3D G3DSA:3.10.105.10 326 526 5.9E-63 T 22-04-2016 VPUCM_RS05670 27674b33b39416673eecd4027fe2283a 557 PANTHER PTHR30290:SF23 51 555 7.4E-196 T 22-04-2016 VPUCM_RS05670 27674b33b39416673eecd4027fe2283a 557 PANTHER PTHR30290 51 555 7.4E-196 T 22-04-2016 VPUCM_RS00820 a17f879dd8e283879e3103b7d824e48f 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 1.3E-13 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 VPUCM_RS00820 a17f879dd8e283879e3103b7d824e48f 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 3.5E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 VPUCM_RS00820 a17f879dd8e283879e3103b7d824e48f 210 Gene3D G3DSA:3.30.1150.10 131 208 6.7E-8 T 22-04-2016 VPUCM_RS00820 a17f879dd8e283879e3103b7d824e48f 210 SUPERFAMILY SSF74653 122 207 3.4E-18 T 22-04-2016 VPUCM_RS00820 a17f879dd8e283879e3103b7d824e48f 210 PANTHER PTHR33446:SF1 122 210 5.5E-17 T 22-04-2016 VPUCM_RS00820 a17f879dd8e283879e3103b7d824e48f 210 PANTHER PTHR33446 122 210 5.5E-17 T 22-04-2016 VPUCM_RS08620 2fc4049314009210f72e8d6e425ef888 308 PANTHER PTHR30024:SF13 7 308 2.5E-97 T 22-04-2016 VPUCM_RS08620 2fc4049314009210f72e8d6e425ef888 308 PANTHER PTHR30024 7 308 2.5E-97 T 22-04-2016 VPUCM_RS08620 2fc4049314009210f72e8d6e425ef888 308 Pfam PF16868 NMT1-like family 16 305 1.0E-98 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VPUCM_RS08620 2fc4049314009210f72e8d6e425ef888 308 Gene3D G3DSA:3.40.190.10 103 236 3.6E-37 T 22-04-2016 VPUCM_RS08620 2fc4049314009210f72e8d6e425ef888 308 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 9 305 2.6E-119 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VPUCM_RS08620 2fc4049314009210f72e8d6e425ef888 308 SUPERFAMILY SSF53850 12 307 5.56E-92 T 22-04-2016 VPUCM_RS08620 2fc4049314009210f72e8d6e425ef888 308 Gene3D G3DSA:3.40.190.10 237 306 2.3E-66 T 22-04-2016 VPUCM_RS08620 2fc4049314009210f72e8d6e425ef888 308 Gene3D G3DSA:3.40.190.10 11 94 2.3E-66 T 22-04-2016 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PANTHER PTHR11817:SF17 5 480 1.0E-304 T 22-04-2016 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 SUPERFAMILY SSF51621 171 344 3.93E-86 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 SUPERFAMILY SSF51621 4 79 3.93E-86 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PANTHER PTHR11817 5 480 1.0E-304 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 Gene3D G3DSA:3.20.20.60 6 76 4.2E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 Gene3D G3DSA:3.20.20.60 172 331 4.2E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 SUPERFAMILY SSF52935 329 480 3.27E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 Gene3D G3DSA:2.40.33.10 77 170 2.3E-30 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.4E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 4.1E-131 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 SUPERFAMILY SSF50800 74 169 2.09E-27 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 8.5E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 8.9E-169 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS10495 bf1bf9adaf3c93d8c7158f041de1f78f 480 Gene3D G3DSA:3.40.1380.20 332 480 2.1E-38 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VPUCM_RS06520 7843551475521e684e4214c14064082e 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 1.0E-77 T 22-04-2016 IPR005614 NrfD family VPUCM_RS06520 7843551475521e684e4214c14064082e 323 PANTHER PTHR34856:SF2 8 321 2.1E-94 T 22-04-2016 VPUCM_RS06520 7843551475521e684e4214c14064082e 323 PANTHER PTHR34856 8 321 2.1E-94 T 22-04-2016 VPUCM_RS06520 7843551475521e684e4214c14064082e 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 2.9E-147 T 22-04-2016 IPR017566 NrfD VPUCM_RS01470 d5416c7f0eac08b463d8687425d13580 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01470 d5416c7f0eac08b463d8687425d13580 63 Gene3D G3DSA:1.10.287.310 1 60 1.2E-29 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01470 d5416c7f0eac08b463d8687425d13580 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01470 d5416c7f0eac08b463d8687425d13580 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.4E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01470 d5416c7f0eac08b463d8687425d13580 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.3E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01470 d5416c7f0eac08b463d8687425d13580 63 PANTHER PTHR10916 1 63 4.1E-31 T 22-04-2016 VPUCM_RS01470 d5416c7f0eac08b463d8687425d13580 63 SUPERFAMILY SSF46561 1 61 2.22E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 316 1.6E-53 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 Gene3D G3DSA:3.30.450.20 15 129 4.6E-10 T 22-04-2016 VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 SUPERFAMILY SSF55073 161 317 7.53E-50 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 PANTHER PTHR10799 1 69 4.2E-30 T 22-04-2016 VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 PANTHER PTHR10799 189 312 4.2E-30 T 22-04-2016 VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 SUPERFAMILY SSF55785 13 93 6.98E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 PANTHER PTHR10799:SF750 1 69 4.2E-30 T 22-04-2016 VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 PANTHER PTHR10799:SF750 189 312 4.2E-30 T 22-04-2016 VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 SMART SM00267 145 317 1.8E-57 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 3.3E-43 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS07590 abae499a85e8f4df778118f8aa7f000b 320 Gene3D G3DSA:3.30.70.270 158 317 5.3E-52 T 22-04-2016 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 SUPERFAMILY SSF52540 146 380 4.14E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 Gene3D G3DSA:3.40.50.300 145 311 9.6E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 PANTHER PTHR32071 27 444 3.2E-201 T 22-04-2016 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 Pfam PF00158 Sigma-54 interaction domain 146 305 2.8E-37 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.6E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 Gene3D G3DSA:1.10.10.60 384 438 1.0E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 Gene3D G3DSA:1.10.8.60 312 383 1.7E-23 T 22-04-2016 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 SMART SM00382 166 306 0.003 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 SUPERFAMILY SSF52172 27 190 1.39E-7 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 SUPERFAMILY SSF46689 352 438 5.38E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 PANTHER PTHR32071:SF34 27 444 3.2E-201 T 22-04-2016 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS02530 8beb4647da91366f373ddf5812985a13 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 PANTHER PTHR11911 147 356 8.6E-34 T 22-04-2016 VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 SUPERFAMILY SSF51206 8 128 1.7E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 604 5.6E-39 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 2.4E-42 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 Gene3D G3DSA:3.10.580.10 148 277 5.5E-16 T 22-04-2016 VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.2E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 SUPERFAMILY SSF54631 144 276 3.01E-16 T 22-04-2016 VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 Gene3D G3DSA:2.60.120.10 8 128 1.7E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS15045 e0b90c860594dea6ce7011aa57aa69cf 608 PANTHER PTHR11911:SF68 147 356 8.6E-34 T 22-04-2016 VPUCM_RS14050 8fc56658b3fe19cfdba10fdb1e5c2f74 1292 Pfam PF13116 Protein of unknown function 506 792 2.0E-94 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 VPUCM_RS14050 8fc56658b3fe19cfdba10fdb1e5c2f74 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1280 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 VPUCM_RS14050 8fc56658b3fe19cfdba10fdb1e5c2f74 1292 PANTHER PTHR38690 1 1289 0.0 T 22-04-2016 VPUCM_RS14050 8fc56658b3fe19cfdba10fdb1e5c2f74 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 1.7E-58 T 22-04-2016 IPR032712 AsmA-like, C-terminal VPUCM_RS04990 67b180edeb70359719e8e227e1ff1a03 568 SUPERFAMILY SSF53448 8 237 1.88E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS04990 67b180edeb70359719e8e227e1ff1a03 568 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 261 557 2.5E-15 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS04990 67b180edeb70359719e8e227e1ff1a03 568 PANTHER PTHR10859 9 252 1.1E-78 T 22-04-2016 VPUCM_RS04990 67b180edeb70359719e8e227e1ff1a03 568 PANTHER PTHR10859:SF84 9 252 1.1E-78 T 22-04-2016 VPUCM_RS04990 67b180edeb70359719e8e227e1ff1a03 568 Pfam PF00535 Glycosyl transferase family 2 8 127 7.5E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS04990 67b180edeb70359719e8e227e1ff1a03 568 Gene3D G3DSA:3.90.550.10 9 124 4.9E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS10200 15dafc044b88da90c3acf16b86235803 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 402 3.6E-166 T 22-04-2016 IPR021552 Putative, 10TM heavy-metal exporter VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 SUPERFAMILY SSF52821 194 314 1.96E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 Gene3D G3DSA:3.40.250.10 44 184 7.7E-24 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 SMART SM00450 16 169 0.0028 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 SMART SM00450 195 314 1.9E-17 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 SUPERFAMILY SSF52821 45 182 4.85E-22 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 ProSitePatterns PS00683 Rhodanese C-terminal signature. 298 308 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 Gene3D G3DSA:3.40.250.10 192 314 4.1E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 Pfam PF00581 Rhodanese-like domain 201 309 8.4E-13 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 Pfam PF00581 Rhodanese-like domain 81 164 1.9E-8 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS10025 26bdec815973fb4dec0ec02bb833347d 327 PANTHER PTHR11364 108 309 1.9E-45 T 22-04-2016 VPUCM_RS00315 3b751134119be0803749f4b17bea8ed6 311 Pfam PF03466 LysR substrate binding domain 95 255 4.8E-11 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS00315 3b751134119be0803749f4b17bea8ed6 311 SUPERFAMILY SSF46785 7 88 4.69E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00315 3b751134119be0803749f4b17bea8ed6 311 PANTHER PTHR30118 1 266 8.1E-36 T 22-04-2016 VPUCM_RS00315 3b751134119be0803749f4b17bea8ed6 311 Gene3D G3DSA:1.10.10.10 3 88 1.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00315 3b751134119be0803749f4b17bea8ed6 311 Gene3D G3DSA:3.40.190.10 92 210 2.4E-10 T 22-04-2016 VPUCM_RS00315 3b751134119be0803749f4b17bea8ed6 311 SUPERFAMILY SSF53850 92 300 3.26E-18 T 22-04-2016 VPUCM_RS00315 3b751134119be0803749f4b17bea8ed6 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS01440 b31e1053967a7de8f847d99ce8f56d74 100 PANTHER PTHR11620 9 95 1.5E-35 T 22-04-2016 VPUCM_RS01440 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01440 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 6 98 8.0E-36 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VPUCM_RS01440 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01440 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site VPUCM_RS01440 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 SMART SM00278 566 585 300.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 SMART SM00278 534 553 0.24 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 Pfam PF14520 Helix-hairpin-helix domain 536 587 1.3E-9 T 22-04-2016 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 SUPERFAMILY SSF82771 2 78 4.97E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 SUPERFAMILY SSF47781 499 587 3.18E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 SUPERFAMILY SSF46600 168 221 3.27E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 Pfam PF02151 UvrB/uvrC motif 183 216 1.1E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 Pfam PF01541 GIY-YIG catalytic domain 2 71 2.3E-9 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 585 26.823 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 PANTHER PTHR30562:SF1 1 586 4.5E-274 T 22-04-2016 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 Gene3D G3DSA:4.10.860.10 161 221 1.0E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 PANTHER PTHR30562 1 586 4.5E-274 T 22-04-2016 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 Gene3D G3DSA:1.10.150.20 533 587 5.6E-23 T 22-04-2016 VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 365 520 7.7E-44 T 22-04-2016 IPR001162 UvrC family homology region VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 SMART SM00465 1 76 3.4E-15 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 Gene3D G3DSA:3.40.1440.10 2 75 6.0E-8 T 22-04-2016 IPR027299 GIY-YIG domain VPUCM_RS06410 df8622f61afc63bb172743d9e001d395 588 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 567 9.9E-209 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 PANTHER PTHR33516:SF2 1 206 5.7E-103 T 22-04-2016 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.634 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 Pfam PF00717 Peptidase S24-like 118 183 2.2E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 SUPERFAMILY SSF51306 79 202 3.49E-36 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 Pfam PF01726 LexA DNA binding domain 1 65 4.3E-29 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 PANTHER PTHR33516 1 206 5.7E-103 T 22-04-2016 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 5.6E-81 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 Gene3D G3DSA:2.10.109.10 80 203 8.1E-45 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 SUPERFAMILY SSF46785 3 69 3.14E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15385 970f31dc1953091b171244b1201e7f08 206 Gene3D G3DSA:1.10.10.10 1 69 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05505 02fa32fa95ce6a31c2b875ebba05a7c4 235 SMART SM00382 33 221 2.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05505 02fa32fa95ce6a31c2b875ebba05a7c4 235 Gene3D G3DSA:3.40.50.300 3 227 1.3E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05505 02fa32fa95ce6a31c2b875ebba05a7c4 235 PANTHER PTHR24220:SF111 6 222 1.1E-120 T 22-04-2016 VPUCM_RS05505 02fa32fa95ce6a31c2b875ebba05a7c4 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS05505 02fa32fa95ce6a31c2b875ebba05a7c4 235 PANTHER PTHR24220 6 222 1.1E-120 T 22-04-2016 VPUCM_RS05505 02fa32fa95ce6a31c2b875ebba05a7c4 235 Pfam PF00005 ABC transporter 24 172 3.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS05505 02fa32fa95ce6a31c2b875ebba05a7c4 235 SUPERFAMILY SSF52540 4 225 2.99E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05505 02fa32fa95ce6a31c2b875ebba05a7c4 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.6E-111 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 PANTHER PTHR26402 1 225 1.1E-97 T 22-04-2016 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 SUPERFAMILY SSF52172 2 117 8.11E-38 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 1.0E-99 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 SUPERFAMILY SSF46894 127 225 3.4E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 PANTHER PTHR26402:SF575 1 225 1.1E-97 T 22-04-2016 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 Pfam PF00072 Response regulator receiver domain 3 113 2.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 SMART SM00448 1 112 3.4E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 5.5E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 SMART SM00862 149 224 9.8E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 Gene3D G3DSA:1.10.10.10 127 226 2.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01915 1879d955e21143c89a040023193f160f 230 Gene3D G3DSA:3.40.50.2300 2 119 2.0E-37 T 22-04-2016 VPUCM_RS03105 7f01b8f61d3396a521f895a8890b7387 832 SMART SM00490 405 502 9.4E-6 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS03105 7f01b8f61d3396a521f895a8890b7387 832 SUPERFAMILY SSF52540 421 512 5.01E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03105 7f01b8f61d3396a521f895a8890b7387 832 SUPERFAMILY SSF52540 150 296 5.01E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03105 7f01b8f61d3396a521f895a8890b7387 832 SUPERFAMILY SSF52540 336 389 5.01E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03105 7f01b8f61d3396a521f895a8890b7387 832 Gene3D G3DSA:3.40.50.300 135 284 3.4E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03105 7f01b8f61d3396a521f895a8890b7387 832 SMART SM00487 136 324 1.2E-13 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS03105 7f01b8f61d3396a521f895a8890b7387 832 Pfam PF00270 DEAD/DEAH box helicase 141 281 3.1E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS03105 7f01b8f61d3396a521f895a8890b7387 832 Gene3D G3DSA:3.40.50.300 356 501 5.5E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 PANTHER PTHR21363 88 372 8.0E-73 T 22-04-2016 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 Gene3D G3DSA:1.20.59.10 4 83 6.0E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 Gene3D G3DSA:3.40.50.720 84 247 8.4E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 SUPERFAMILY SSF48179 241 366 1.07E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 SUPERFAMILY SSF48600 4 88 7.14E-24 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 PIRSF PIRSF001499 1 374 1.6E-186 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 SUPERFAMILY SSF51735 91 237 1.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 SMART SM00830 9 89 3.4E-29 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 PANTHER PTHR21363:SF0 88 372 8.0E-73 T 22-04-2016 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.3E-42 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 Pfam PF02153 Prephenate dehydrogenase 135 344 1.1E-32 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 Gene3D G3DSA:1.10.3660.10 249 373 2.1E-55 T 22-04-2016 VPUCM_RS02680 5f0bdac1a47af903565d2e1609d1e675 375 Pfam PF01817 Chorismate mutase type II 9 87 1.7E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VPUCM_RS12055 782282b7c817a91f3b94d513558516a5 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 3.7E-40 T 22-04-2016 VPUCM_RS12055 782282b7c817a91f3b94d513558516a5 247 PANTHER PTHR37468 1 243 1.1E-96 T 22-04-2016 VPUCM_RS12055 782282b7c817a91f3b94d513558516a5 247 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 28.236 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VPUCM_RS02200 e3885cf8f858dd87a8ff34071d9b0f9a 196 SUPERFAMILY SSF53697 1 191 1.05E-56 T 22-04-2016 VPUCM_RS02200 e3885cf8f858dd87a8ff34071d9b0f9a 196 PANTHER PTHR30390 1 196 3.2E-119 T 22-04-2016 VPUCM_RS02200 e3885cf8f858dd87a8ff34071d9b0f9a 196 Gene3D G3DSA:3.40.50.10490 2 191 7.7E-59 T 22-04-2016 VPUCM_RS02200 e3885cf8f858dd87a8ff34071d9b0f9a 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.37 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VPUCM_RS02200 e3885cf8f858dd87a8ff34071d9b0f9a 196 Pfam PF13580 SIS domain 9 144 1.7E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VPUCM_RS02200 e3885cf8f858dd87a8ff34071d9b0f9a 196 PANTHER PTHR30390:SF5 1 196 3.2E-119 T 22-04-2016 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 PANTHER PTHR30600:SF7 17 314 4.5E-117 T 22-04-2016 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 Pfam PF00034 Cytochrome c 195 304 5.9E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 SUPERFAMILY SSF46626 27 174 1.41E-48 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 SUPERFAMILY SSF46626 173 324 1.6E-42 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 PIRSF PIRSF000294 14 328 7.6E-125 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 7.1E-50 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 Gene3D G3DSA:1.10.760.10 178 316 8.5E-47 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 PANTHER PTHR30600 17 314 4.5E-117 T 22-04-2016 VPUCM_RS08925 28d57c0bb4f4fbdf04a440077fa78235 328 Gene3D G3DSA:1.10.760.10 36 177 3.6E-49 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.1E-9 T 22-04-2016 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.1E-9 T 22-04-2016 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.6E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:3.90.700.10 234 351 4.7E-35 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 PANTHER PTHR11632 1 584 0.0 T 22-04-2016 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:3.50.50.60 353 417 7.2E-108 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:3.50.50.60 4 233 7.2E-108 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:4.10.80.40 543 577 5.5E-17 T 22-04-2016 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 PANTHER PTHR11632:SF50 1 584 0.0 T 22-04-2016 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 Pfam PF00890 FAD binding domain 7 397 4.1E-113 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:1.20.58.100 426 537 3.7E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 22-04-2016 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 22-04-2016 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 2.6E-236 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 PIRSF PIRSF000171 1 574 9.0E-46 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 SUPERFAMILY SSF56425 227 358 3.59E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 22-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 SUPERFAMILY SSF51905 3 250 2.44E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 SUPERFAMILY SSF51905 361 441 2.44E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 SUPERFAMILY SSF46977 444 581 8.37E-44 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VPUCM_RS14875 d4bb9638019c9e175adec8ed9f0c8f46 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VPUCM_RS15205 64b9a1abb87d09eeeccac2b66c200e09 260 PANTHER PTHR22769 90 237 5.4E-58 T 22-04-2016 VPUCM_RS15205 64b9a1abb87d09eeeccac2b66c200e09 260 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VPUCM_RS15205 64b9a1abb87d09eeeccac2b66c200e09 260 SUPERFAMILY SSF55811 63 248 1.83E-43 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS15205 64b9a1abb87d09eeeccac2b66c200e09 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 260 41.559 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VPUCM_RS15205 64b9a1abb87d09eeeccac2b66c200e09 260 Gene3D G3DSA:3.90.79.10 98 251 1.2E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS15205 64b9a1abb87d09eeeccac2b66c200e09 260 PANTHER PTHR22769:SF7 90 237 5.4E-58 T 22-04-2016 VPUCM_RS15205 64b9a1abb87d09eeeccac2b66c200e09 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 5.9E-9 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VPUCM_RS15205 64b9a1abb87d09eeeccac2b66c200e09 260 Pfam PF00293 NUDIX domain 137 236 1.0E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS04050 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF07670 Nucleoside recognition 99 195 1.1E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04050 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 9.5E-27 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04050 421b6af25ca2cd328982fa90e2852d01 427 PANTHER PTHR10590 4 420 2.5E-217 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04050 421b6af25ca2cd328982fa90e2852d01 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 5.7E-155 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04050 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 3.0E-74 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 PANTHER PTHR30389 1 504 0.0 T 22-04-2016 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 SUPERFAMILY SSF117457 317 489 4.84E-64 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 Gene3D G3DSA:3.20.130.10 303 490 2.6E-75 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.8E-63 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05683 Fumarase C-terminus 289 490 3.9E-84 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.8E-51 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 2.9E-98 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 PIRSF PIRSF001394 1 505 1.0E-217 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS06730 5467c0337b26c44c4c60e1d1b834efd1 505 PANTHER PTHR30389:SF1 1 504 0.0 T 22-04-2016 VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 Pfam PF00571 CBS domain 278 325 2.5E-5 T 22-04-2016 IPR000644 CBS domain VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 Gene3D G3DSA:3.10.580.10 192 318 3.4E-13 T 22-04-2016 VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 Pfam PF01595 Domain of unknown function DUF21 13 181 3.1E-49 T 22-04-2016 IPR002550 Domain of unknown function DUF21 VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 PANTHER PTHR22777 2 418 3.8E-151 T 22-04-2016 VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 PANTHER PTHR22777:SF3 2 418 3.8E-151 T 22-04-2016 VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 Gene3D G3DSA:3.30.465.10 319 418 6.7E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 Pfam PF03471 Transporter associated domain 344 418 1.5E-17 T 22-04-2016 IPR005170 Transporter-associated domain VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 SMART SM01091 342 420 2.2E-24 T 22-04-2016 IPR005170 Transporter-associated domain VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 SUPERFAMILY SSF56176 340 423 1.83E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VPUCM_RS13095 a518815ee07b586a806be0127c771a50 426 SUPERFAMILY SSF54631 192 329 3.92E-24 T 22-04-2016 VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 PANTHER PTHR19211 1 507 1.1E-207 T 22-04-2016 VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 Gene3D G3DSA:3.40.50.300 320 507 2.0E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 Gene3D G3DSA:3.40.50.300 2 276 1.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 Pfam PF12848 ABC transporter 228 304 1.6E-17 T 22-04-2016 IPR032781 ABC-transporter extension domain VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 PANTHER PTHR19211:SF65 1 507 1.1E-207 T 22-04-2016 VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 SUPERFAMILY SSF52540 333 507 3.18E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 SMART SM00382 345 512 4.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 SMART SM00382 28 235 2.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 SUPERFAMILY SSF52540 3 246 1.99E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 Pfam PF00005 ABC transporter 23 188 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS15095 efbef54ab2fbf77a5ff28a580c85ba65 521 Pfam PF00005 ABC transporter 337 465 3.6E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 SUPERFAMILY SSF52833 31 150 7.61E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 2.6E-22 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 PANTHER PTHR32419:SF6 1 315 1.4E-173 T 22-04-2016 VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 PIRSF PIRSF015753 5 312 5.3E-135 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 261 9.6E-12 T 22-04-2016 VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 Gene3D G3DSA:3.40.30.10 30 165 4.3E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 SUPERFAMILY SSF47616 164 313 1.95E-36 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 PANTHER PTHR32419 1 315 1.4E-173 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VPUCM_RS05695 161b412d47aecb22a90301473e56931c 315 Gene3D G3DSA:1.20.1050.10 166 275 6.0E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 SUPERFAMILY SSF52833 3 107 1.66E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 Pfam PF00085 Thioredoxin 5 106 7.5E-33 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 Gene3D G3DSA:3.40.30.10 2 107 8.6E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 PIRSF PIRSF000077 2 108 8.5E-43 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.5E-37 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 22-04-2016 VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 22-04-2016 VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 22-04-2016 VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 PANTHER PTHR10438 3 108 1.6E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VPUCM_RS15655 0816a04e2fe117c94c7c89d29cd801f4 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 PIRSF PIRSF036597 3 994 0.0 T 22-04-2016 IPR012045 Peptidase M6, unassigned InhA-related VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 973 993 6.7E-5 T 22-04-2016 IPR020008 GlyGly-CTERM domain VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 Pfam PF05547 Immune inhibitor A peptidase M6 169 376 6.1E-15 T 22-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 147 435 6.8E-74 T 22-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 Gene3D G3DSA:3.40.390.10 283 373 6.1E-9 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 ProSitePatterns PS00018 EF-hand calcium-binding domain. 247 259 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 SUPERFAMILY SSF55486 299 358 5.19E-7 T 22-04-2016 VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 SMART SM00089 779 871 5.2E-4 T 22-04-2016 IPR022409 PKD/Chitinase domain VPUCM_RS05070 6f6294de6c62dbef7f78423a830884b5 994 SUPERFAMILY SSF49299 775 871 1.88E-6 T 22-04-2016 IPR000601 PKD domain VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 PIRSF PIRSF037618 1 707 1.4E-296 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 5.3E-28 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 Pfam PF02926 THUMP domain 30 153 3.0E-13 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 3.8E-62 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 SUPERFAMILY SSF53335 399 707 2.91E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 SUPERFAMILY SSF53335 140 217 1.04E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 SUPERFAMILY SSF53335 258 371 1.04E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.47 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 PANTHER PTHR18895 405 682 6.0E-124 T 22-04-2016 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 SMART SM00981 56 154 1.7E-19 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 PANTHER PTHR18895:SF62 405 682 6.0E-124 T 22-04-2016 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 Gene3D G3DSA:3.40.50.150 436 705 9.8E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 Gene3D G3DSA:3.40.50.150 255 333 2.7E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08345 47e326ecbc74d97e28d77028d6701b77 707 Gene3D G3DSA:3.40.50.150 153 214 2.7E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 SUPERFAMILY SSF52540 576 601 2.66E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 PANTHER PTHR11472 14 624 1.0E-224 T 22-04-2016 VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 Gene3D G3DSA:3.40.50.300 454 602 1.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 Pfam PF00270 DEAD/DEAH box helicase 31 83 2.5E-5 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 Pfam PF13307 Helicase C-terminal domain 462 619 4.0E-34 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 PANTHER PTHR11472:SF37 14 624 1.0E-224 T 22-04-2016 VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 SMART SM00487 17 310 0.0029 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 SUPERFAMILY SSF52540 14 236 5.32E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 SMART SM00491 477 606 2.0E-45 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 SUPERFAMILY SSF52540 42 89 2.66E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 SUPERFAMILY SSF52540 480 545 2.66E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 Gene3D G3DSA:3.40.50.300 193 237 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04860 ca7a6d2f6b34c41225b6d475ef08db82 636 Gene3D G3DSA:3.40.50.300 14 117 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04810 238bc1359af429508a1f3d610be403f3 262 Pfam PF00005 ABC transporter 20 148 3.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS04810 238bc1359af429508a1f3d610be403f3 262 PANTHER PTHR24220 6 241 8.3E-124 T 22-04-2016 VPUCM_RS04810 238bc1359af429508a1f3d610be403f3 262 SMART SM00382 29 199 4.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS04810 238bc1359af429508a1f3d610be403f3 262 SUPERFAMILY SSF52540 4 217 1.31E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04810 238bc1359af429508a1f3d610be403f3 262 Gene3D G3DSA:3.40.50.300 3 216 3.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04810 238bc1359af429508a1f3d610be403f3 262 PANTHER PTHR24220:SF466 6 241 8.3E-124 T 22-04-2016 VPUCM_RS09405 12ae7bb6d5506981a86ad62bd5912840 333 SUPERFAMILY SSF54506 3 330 5.38E-118 T 22-04-2016 VPUCM_RS09405 12ae7bb6d5506981a86ad62bd5912840 333 Gene3D G3DSA:3.10.310.10 3 153 9.7E-67 T 22-04-2016 VPUCM_RS09405 12ae7bb6d5506981a86ad62bd5912840 333 PANTHER PTHR33442 1 333 9.5E-126 T 22-04-2016 VPUCM_RS09405 12ae7bb6d5506981a86ad62bd5912840 333 Gene3D G3DSA:3.10.310.10 154 320 4.2E-66 T 22-04-2016 VPUCM_RS09405 12ae7bb6d5506981a86ad62bd5912840 333 PANTHER PTHR33442:SF2 1 333 9.5E-126 T 22-04-2016 VPUCM_RS09405 12ae7bb6d5506981a86ad62bd5912840 333 PIRSF PIRSF029792 1 333 7.5E-138 T 22-04-2016 IPR008794 Proline racemase family VPUCM_RS09405 12ae7bb6d5506981a86ad62bd5912840 333 Pfam PF05544 Proline racemase 8 330 7.5E-128 T 22-04-2016 IPR008794 Proline racemase family VPUCM_RS04645 2dafe22dc75f80d76941867531d18725 185 Gene3D G3DSA:1.10.132.20 67 185 2.8E-45 T 22-04-2016 IPR023584 Ribosome recycling factor domain VPUCM_RS04645 2dafe22dc75f80d76941867531d18725 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.1E-77 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VPUCM_RS04645 2dafe22dc75f80d76941867531d18725 185 Pfam PF01765 Ribosome recycling factor 20 183 2.5E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain VPUCM_RS04645 2dafe22dc75f80d76941867531d18725 185 PANTHER PTHR20982 1 185 6.6E-82 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VPUCM_RS04645 2dafe22dc75f80d76941867531d18725 185 SUPERFAMILY SSF55194 2 184 1.01E-71 T 22-04-2016 IPR023584 Ribosome recycling factor domain VPUCM_RS04645 2dafe22dc75f80d76941867531d18725 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.833 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VPUCM_RS15695 4cdb968cf5d87351230815381278b44a 219 PANTHER PTHR30086:SF13 2 218 2.1E-89 T 22-04-2016 VPUCM_RS15695 4cdb968cf5d87351230815381278b44a 219 PIRSF PIRSF006324 1 214 7.2E-49 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS15695 4cdb968cf5d87351230815381278b44a 219 PANTHER PTHR30086 2 218 2.1E-89 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS15695 4cdb968cf5d87351230815381278b44a 219 Pfam PF01810 LysE type translocator 16 212 6.3E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 PANTHER PTHR30183:SF2 407 541 2.5E-271 T 22-04-2016 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 PANTHER PTHR30183:SF2 2 390 2.5E-271 T 22-04-2016 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 Gene3D G3DSA:1.10.3720.10 284 536 4.1E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 Gene3D G3DSA:1.10.3720.10 11 263 6.2E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 SUPERFAMILY SSF161098 282 535 7.06E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 SUPERFAMILY SSF161098 8 257 1.83E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 532 1.0E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 1.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 PANTHER PTHR30183 407 541 2.5E-271 T 22-04-2016 VPUCM_RS12885 c65ebfe6a0c45a411afd296fd19ae21a 541 PANTHER PTHR30183 2 390 2.5E-271 T 22-04-2016 VPUCM_RS12465 f079fc26433d91a6087abc4988815fe9 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 4.2E-98 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 VPUCM_RS12465 f079fc26433d91a6087abc4988815fe9 505 PANTHER PTHR38686 1 505 6.6E-118 T 22-04-2016 VPUCM_RS12465 f079fc26433d91a6087abc4988815fe9 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 1.3E-36 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS12465 f079fc26433d91a6087abc4988815fe9 505 Gene3D G3DSA:3.60.110.10 215 483 1.5E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS12465 f079fc26433d91a6087abc4988815fe9 505 SUPERFAMILY SSF56317 213 486 8.76E-41 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS12465 f079fc26433d91a6087abc4988815fe9 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.6 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 Pfam PF13662 Toprim domain 82 172 4.7E-23 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 4.1E-78 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.386 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 PANTHER PTHR30446:SF0 1 199 4.3E-115 T 22-04-2016 VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 SMART SM00493 81 166 1.3E-16 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 Pfam PF02132 RecR protein 40 77 2.3E-14 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 PANTHER PTHR30446 1 199 4.3E-115 T 22-04-2016 VPUCM_RS11245 f90faade2ac3d8a11b3323ef1d296025 199 SUPERFAMILY SSF111304 2 199 2.35E-71 T 22-04-2016 IPR023627 Recombination protein RecR VPUCM_RS10660 bde58e885714140452c8161ab710bbf0 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 3.1E-43 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VPUCM_RS10660 bde58e885714140452c8161ab710bbf0 178 SUPERFAMILY SSF158442 17 163 2.88E-44 T 22-04-2016 VPUCM_RS10660 bde58e885714140452c8161ab710bbf0 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.991 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB VPUCM_RS10660 bde58e885714140452c8161ab710bbf0 178 PANTHER PTHR36570 1 178 3.2E-84 T 22-04-2016 VPUCM_RS10660 bde58e885714140452c8161ab710bbf0 178 Gene3D G3DSA:1.20.1550.10 5 175 3.8E-65 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain VPUCM_RS10660 bde58e885714140452c8161ab710bbf0 178 PANTHER PTHR36570:SF2 1 178 3.2E-84 T 22-04-2016 VPUCM_RS05345 93943915787374c796fbe9db1ea5e35d 101 Gene3D G3DSA:1.10.260.40 5 74 1.8E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS05345 93943915787374c796fbe9db1ea5e35d 101 SMART SM00530 10 69 6.4E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS05345 93943915787374c796fbe9db1ea5e35d 101 PANTHER PTHR10245 7 75 1.3E-12 T 22-04-2016 VPUCM_RS05345 93943915787374c796fbe9db1ea5e35d 101 SUPERFAMILY SSF47413 5 74 8.16E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS05345 93943915787374c796fbe9db1ea5e35d 101 Pfam PF12844 Helix-turn-helix domain 9 70 4.6E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS08775 5f53a683ff49db84408e146433053352 212 PANTHER PTHR34982 1 209 2.4E-58 T 22-04-2016 VPUCM_RS08775 5f53a683ff49db84408e146433053352 212 PANTHER PTHR34982:SF2 1 209 2.4E-58 T 22-04-2016 VPUCM_RS08775 5f53a683ff49db84408e146433053352 212 Pfam PF02108 Flagellar assembly protein FliH 75 194 4.9E-17 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VPUCM_RS08775 5f53a683ff49db84408e146433053352 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 1.3E-41 T 22-04-2016 IPR012842 Type III secretion system HrpE/YscL VPUCM_RS01510 373e78b454ba8d0fb118e3d8020ad1d1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.5E-44 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01510 373e78b454ba8d0fb118e3d8020ad1d1 117 SUPERFAMILY SSF53137 3 115 6.54E-51 T 22-04-2016 VPUCM_RS01510 373e78b454ba8d0fb118e3d8020ad1d1 117 PANTHER PTHR12899 1 117 1.1E-46 T 22-04-2016 VPUCM_RS01510 373e78b454ba8d0fb118e3d8020ad1d1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.6E-43 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01510 373e78b454ba8d0fb118e3d8020ad1d1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.541 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01510 373e78b454ba8d0fb118e3d8020ad1d1 117 Gene3D G3DSA:3.30.420.100 24 117 2.3E-35 T 22-04-2016 VPUCM_RS20900 8a0559e9cbeb4baa6cc686a7f74e30ae 222 PANTHER PTHR10362 2 215 2.0E-83 T 22-04-2016 VPUCM_RS20900 8a0559e9cbeb4baa6cc686a7f74e30ae 222 Gene3D G3DSA:1.20.200.10 3 220 2.7E-82 T 22-04-2016 VPUCM_RS20900 8a0559e9cbeb4baa6cc686a7f74e30ae 222 PANTHER PTHR10362:SF7 2 215 2.0E-83 T 22-04-2016 VPUCM_RS20900 8a0559e9cbeb4baa6cc686a7f74e30ae 222 Pfam PF00221 Aromatic amino acid lyase 3 217 5.3E-75 T 22-04-2016 IPR001106 Aromatic amino acid lyase VPUCM_RS20900 8a0559e9cbeb4baa6cc686a7f74e30ae 222 SUPERFAMILY SSF48557 2 219 1.57E-77 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VPUCM_RS15525 9871e65429b307f497c5913806438425 336 Gene3D G3DSA:3.40.50.1820 26 325 9.0E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS15525 9871e65429b307f497c5913806438425 336 Pfam PF12146 Serine aminopeptidase, S33 53 310 7.5E-60 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 VPUCM_RS15525 9871e65429b307f497c5913806438425 336 SUPERFAMILY SSF53474 41 324 4.19E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS15525 9871e65429b307f497c5913806438425 336 PANTHER PTHR11614:SF100 12 335 3.9E-120 T 22-04-2016 VPUCM_RS15525 9871e65429b307f497c5913806438425 336 PANTHER PTHR11614 12 335 3.9E-120 T 22-04-2016 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 Pfam PF10502 Signal peptidase, peptidase S26 220 269 9.7E-8 T 22-04-2016 IPR019533 Peptidase S26 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 Pfam PF00717 Peptidase S24-like 86 161 5.6E-22 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 Gene3D G3DSA:2.170.230.10 154 231 1.3E-19 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 SUPERFAMILY SSF51306 78 298 5.23E-70 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 PANTHER PTHR12383 214 276 2.3E-103 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 PANTHER PTHR12383 3 191 2.3E-103 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 PANTHER PTHR12383:SF27 214 276 2.3E-103 T 22-04-2016 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 PANTHER PTHR12383:SF27 3 191 2.3E-103 T 22-04-2016 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 9.1E-48 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 Gene3D G3DSA:2.10.109.10 232 275 1.3E-55 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 Gene3D G3DSA:2.10.109.10 76 153 1.3E-55 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.4E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 4.4E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VPUCM_RS13325 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.4E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VPUCM_RS11635 6a9c24ac7342e3fa0e7c9b7913abb071 666 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 431 655 1.0E-57 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 VPUCM_RS11635 6a9c24ac7342e3fa0e7c9b7913abb071 666 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 7.7E-21 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VPUCM_RS11635 6a9c24ac7342e3fa0e7c9b7913abb071 666 PANTHER PTHR30288:SF0 424 665 3.6E-97 T 22-04-2016 VPUCM_RS11635 6a9c24ac7342e3fa0e7c9b7913abb071 666 PANTHER PTHR30288:SF0 1 382 3.6E-97 T 22-04-2016 VPUCM_RS11635 6a9c24ac7342e3fa0e7c9b7913abb071 666 Pfam PF07196 Flagellin hook IN motif 125 177 3.3E-6 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VPUCM_RS11635 6a9c24ac7342e3fa0e7c9b7913abb071 666 PANTHER PTHR30288 424 665 3.6E-97 T 22-04-2016 VPUCM_RS11635 6a9c24ac7342e3fa0e7c9b7913abb071 666 PANTHER PTHR30288 1 382 3.6E-97 T 22-04-2016 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 Gene3D G3DSA:1.10.287.130 246 315 1.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 318 1.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 SUPERFAMILY SSF55874 309 469 9.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 SMART SM00387 362 470 2.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 PANTHER PTHR24423:SF474 195 469 2.3E-66 T 22-04-2016 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 468 1.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 Pfam PF08521 Two-component sensor kinase N-terminal 23 177 4.7E-7 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 SUPERFAMILY SSF47384 237 318 1.96E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 SMART SM00388 254 319 5.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 7.7E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 7.7E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 7.7E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 PANTHER PTHR24423 195 469 2.3E-66 T 22-04-2016 VPUCM_RS09020 f80d21951090a20bb107c24a09794fc1 470 Gene3D G3DSA:3.30.565.10 324 468 5.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS08440 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 130 228 1.1E-13 T 22-04-2016 VPUCM_RS08440 172e9b387d592147d91dc7b91bf389e5 342 SMART SM00062 38 267 2.7E-53 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS08440 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 229 257 4.3E-18 T 22-04-2016 VPUCM_RS08440 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 35 129 4.3E-18 T 22-04-2016 VPUCM_RS08440 172e9b387d592147d91dc7b91bf389e5 342 SUPERFAMILY SSF53850 29 259 1.09E-49 T 22-04-2016 VPUCM_RS08440 172e9b387d592147d91dc7b91bf389e5 342 PANTHER PTHR30085 8 311 6.1E-187 T 22-04-2016 VPUCM_RS08440 172e9b387d592147d91dc7b91bf389e5 342 PANTHER PTHR30085:SF5 8 311 6.1E-187 T 22-04-2016 VPUCM_RS08440 172e9b387d592147d91dc7b91bf389e5 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 8.8E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS10970 75de604cc08e7b9da50896bf46f46bda 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 2.8E-138 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VPUCM_RS10970 75de604cc08e7b9da50896bf46f46bda 348 PANTHER PTHR30578:SF0 1 348 2.6E-145 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VPUCM_RS10970 75de604cc08e7b9da50896bf46f46bda 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 2.7E-106 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VPUCM_RS10970 75de604cc08e7b9da50896bf46f46bda 348 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 348 27.344 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 VPUCM_RS10970 75de604cc08e7b9da50896bf46f46bda 348 PANTHER PTHR30578 1 348 2.6E-145 T 22-04-2016 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 PANTHER PTHR11236 26 453 9.6E-162 T 22-04-2016 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 Pfam PF00425 chorismate binding enzyme 191 444 4.9E-98 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 PANTHER PTHR11236:SF18 26 453 9.6E-162 T 22-04-2016 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 SUPERFAMILY SSF56322 11 453 3.79E-143 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 2.8E-121 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 Gene3D G3DSA:3.60.120.10 19 453 6.1E-154 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VPUCM_RS06725 f25fda4920679c75b1d3b3043e165909 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 156 2.9E-29 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS10315 b0043e33c1d7c3bde74f7cead3efe808 251 Gene3D G3DSA:3.40.50.150 14 231 2.2E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10315 b0043e33c1d7c3bde74f7cead3efe808 251 PANTHER PTHR10108 20 174 4.3E-20 T 22-04-2016 VPUCM_RS10315 b0043e33c1d7c3bde74f7cead3efe808 251 PANTHER PTHR10108 209 227 4.3E-20 T 22-04-2016 VPUCM_RS10315 b0043e33c1d7c3bde74f7cead3efe808 251 SUPERFAMILY SSF53335 15 250 9.95E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10315 b0043e33c1d7c3bde74f7cead3efe808 251 Pfam PF13649 Methyltransferase domain 42 136 1.1E-17 T 22-04-2016 VPUCM_RS01635 6035be79f34807117d0fbca779245477 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 1.3E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VPUCM_RS01635 6035be79f34807117d0fbca779245477 419 PANTHER PTHR30489:SF2 3 204 1.3E-108 T 22-04-2016 VPUCM_RS01635 6035be79f34807117d0fbca779245477 419 PANTHER PTHR30489:SF2 224 418 1.3E-108 T 22-04-2016 VPUCM_RS01635 6035be79f34807117d0fbca779245477 419 Pfam PF02687 FtsX-like permease family 293 410 1.1E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VPUCM_RS01635 6035be79f34807117d0fbca779245477 419 PANTHER PTHR30489 3 204 1.3E-108 T 22-04-2016 VPUCM_RS01635 6035be79f34807117d0fbca779245477 419 PANTHER PTHR30489 224 418 1.3E-108 T 22-04-2016 VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 422 549 1.8E-7 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 SUPERFAMILY SSF52467 221 346 1.42E-5 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 SUPERFAMILY SSF52518 388 562 3.75E-26 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 PANTHER PTHR18968 4 563 9.2E-176 T 22-04-2016 VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 140 1.2E-30 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 9.5E-132 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 PIRSF PIRSF004983 3 571 2.6E-189 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 SUPERFAMILY SSF52518 9 175 3.27E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 397 3.7E-38 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 Gene3D G3DSA:3.40.50.970 365 559 4.9E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 Gene3D G3DSA:3.40.50.970 11 180 1.3E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 32.429 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS05185 fbaf2946fb19a01c7d2ad847bbd888c9 571 PANTHER PTHR18968:SF114 4 563 9.2E-176 T 22-04-2016 VPUCM_RS12990 48a8c21d81cbc44bc2746a325e5250b6 176 PANTHER PTHR22573 1 170 3.5E-79 T 22-04-2016 VPUCM_RS12990 48a8c21d81cbc44bc2746a325e5250b6 176 PANTHER PTHR22573:SF56 1 170 3.5E-79 T 22-04-2016 VPUCM_RS12990 48a8c21d81cbc44bc2746a325e5250b6 176 Gene3D G3DSA:3.40.50.2020 2 175 3.7E-79 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS12990 48a8c21d81cbc44bc2746a325e5250b6 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 2.6E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VPUCM_RS12990 48a8c21d81cbc44bc2746a325e5250b6 176 SUPERFAMILY SSF53271 3 175 6.39E-56 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS12990 48a8c21d81cbc44bc2746a325e5250b6 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 5.1E-74 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 VPUCM_RS01170 a080aed897cfa2ce7e58a620604bb77a 300 Gene3D G3DSA:1.10.40.60 116 204 5.1E-20 T 22-04-2016 VPUCM_RS01170 a080aed897cfa2ce7e58a620604bb77a 300 PANTHER PTHR38831 8 251 3.7E-15 T 22-04-2016 VPUCM_RS01170 a080aed897cfa2ce7e58a620604bb77a 300 Pfam PF03934 Type II secretion system (T2SS), protein K 117 202 9.9E-16 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VPUCM_RS01170 a080aed897cfa2ce7e58a620604bb77a 300 SUPERFAMILY SSF158544 116 203 1.62E-18 T 22-04-2016 VPUCM_RS01170 a080aed897cfa2ce7e58a620604bb77a 300 PANTHER PTHR38831:SF1 8 251 3.7E-15 T 22-04-2016 VPUCM_RS07030 cc3e6868801c2a38d4e9b1cd48da7dd4 146 Gene3D G3DSA:3.40.630.30 48 136 4.5E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07030 cc3e6868801c2a38d4e9b1cd48da7dd4 146 Pfam PF00583 Acetyltransferase (GNAT) family 52 128 5.6E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS07030 cc3e6868801c2a38d4e9b1cd48da7dd4 146 SUPERFAMILY SSF55729 1 134 8.83E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07030 cc3e6868801c2a38d4e9b1cd48da7dd4 146 Gene3D G3DSA:1.10.287.900 1 40 2.1E-5 T 22-04-2016 IPR027455 Spermine/spermidine acetyltransferase, N-terminal domain KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117|UniPathway: UPA00188 VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 Gene3D G3DSA:3.40.50.720 4 241 6.2E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PANTHER PTHR24322 153 185 3.5E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PANTHER PTHR24322 7 137 3.5E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 5.0E-126 T 22-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 SUPERFAMILY SSF51735 3 240 1.42E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PANTHER PTHR24322:SF635 153 185 3.5E-49 T 22-04-2016 VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PANTHER PTHR24322:SF635 7 137 3.5E-49 T 22-04-2016 VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0017 T 22-04-2016 VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.1E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.1E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.1E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04950 5eae175b46ad7974405de10b733291bf 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.1E-57 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 PANTHER PTHR30195:SF2 1 436 0.0 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 PANTHER PTHR30195:SF2 453 681 0.0 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 PANTHER PTHR30195 1 436 0.0 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 PANTHER PTHR30195 453 681 0.0 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 Pfam PF02384 N-6 DNA Methylase 309 597 9.0E-33 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 349 363 5.1E-21 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 464 476 5.1E-21 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 513 537 5.1E-21 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 325 341 5.1E-21 T 22-04-2016 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 467 473 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 Gene3D G3DSA:3.40.50.150 327 594 3.7E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 33 156 1.6E-9 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain VPUCM_RS05865 72a8e1e84c48eca877613d4ee6061dd1 684 SUPERFAMILY SSF53335 198 677 3.76E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 Gene3D G3DSA:3.90.226.10 641 663 4.1E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 Gene3D G3DSA:3.90.226.10 336 529 4.1E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 2.8E-112 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 PANTHER PTHR32060 7 600 1.4E-295 T 22-04-2016 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 3.0E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 SMART SM00245 326 527 1.9E-61 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 Gene3D G3DSA:3.30.750.44 172 251 2.3E-5 T 22-04-2016 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 PANTHER PTHR32060:SF11 7 600 1.4E-295 T 22-04-2016 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 Gene3D G3DSA:2.30.42.10 252 335 1.3E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 3.1E-39 T 22-04-2016 IPR020992 Tail specific protease, C-terminal VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 SMART SM00228 246 323 4.9E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 SUPERFAMILY SSF52096 166 264 2.65E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 SUPERFAMILY SSF52096 350 531 2.65E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 SUPERFAMILY SSF50156 217 338 2.87E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 Pfam PF03572 Peptidase family S41 356 525 2.8E-51 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VPUCM_RS08375 ad428c42d95b43fe646028da2ada762a 668 Pfam PF08180 B melanoma antigen family 9 36 5.8E-15 T 22-04-2016 IPR012530 B melanoma antigen VPUCM_RS10055 aa33b816fdcea4284d7ed401456b8385 215 SMART SM00382 28 214 8.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10055 aa33b816fdcea4284d7ed401456b8385 215 Pfam PF00005 ABC transporter 22 163 2.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS10055 aa33b816fdcea4284d7ed401456b8385 215 PANTHER PTHR24220:SF485 4 204 1.4E-102 T 22-04-2016 VPUCM_RS10055 aa33b816fdcea4284d7ed401456b8385 215 Gene3D G3DSA:3.40.50.300 4 200 2.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10055 aa33b816fdcea4284d7ed401456b8385 215 SUPERFAMILY SSF52540 10 199 4.17E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10055 aa33b816fdcea4284d7ed401456b8385 215 PANTHER PTHR24220 4 204 1.4E-102 T 22-04-2016 VPUCM_RS07975 7072b8e42cded1895e14da87a0f69dc2 208 SUPERFAMILY SSF89155 4 189 5.89E-53 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS07975 7072b8e42cded1895e14da87a0f69dc2 208 Pfam PF02613 Nitrate reductase delta subunit 43 156 7.5E-31 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS07975 7072b8e42cded1895e14da87a0f69dc2 208 PANTHER PTHR34227 9 199 1.5E-80 T 22-04-2016 VPUCM_RS07975 7072b8e42cded1895e14da87a0f69dc2 208 PANTHER PTHR34227:SF4 9 199 1.5E-80 T 22-04-2016 VPUCM_RS07975 7072b8e42cded1895e14da87a0f69dc2 208 Gene3D G3DSA:1.10.3480.10 3 192 7.3E-52 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VPUCM_RS13365 f923239bc60d0d0a101941eec33ccee1 322 SUPERFAMILY SSF101790 237 320 4.97E-21 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain VPUCM_RS13365 f923239bc60d0d0a101941eec33ccee1 322 SUPERFAMILY SSF103025 12 236 8.48E-57 T 22-04-2016 VPUCM_RS13365 f923239bc60d0d0a101941eec33ccee1 322 PANTHER PTHR22602 1 302 3.9E-53 T 22-04-2016 VPUCM_RS13365 f923239bc60d0d0a101941eec33ccee1 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 28 142 1.4E-6 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal VPUCM_RS13365 f923239bc60d0d0a101941eec33ccee1 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 3.8E-25 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site VPUCM_RS13365 f923239bc60d0d0a101941eec33ccee1 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 44.23 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VPUCM_RS13365 f923239bc60d0d0a101941eec33ccee1 322 PANTHER PTHR22602:SF0 1 302 3.9E-53 T 22-04-2016 VPUCM_RS13365 f923239bc60d0d0a101941eec33ccee1 322 Gene3D G3DSA:3.30.70.1400 30 114 2.6E-32 T 22-04-2016 VPUCM_RS13515 53e00e768533ae46a41ef4a50d4a758e 368 Gene3D G3DSA:3.40.50.300 102 342 2.9E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13515 53e00e768533ae46a41ef4a50d4a758e 368 Pfam PF00437 Type II/IV secretion system protein 116 267 3.1E-36 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS13515 53e00e768533ae46a41ef4a50d4a758e 368 SUPERFAMILY SSF52540 4 334 6.34E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13515 53e00e768533ae46a41ef4a50d4a758e 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.4E-126 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VPUCM_RS13515 53e00e768533ae46a41ef4a50d4a758e 368 PANTHER PTHR30486:SF3 1 368 4.1E-160 T 22-04-2016 VPUCM_RS13515 53e00e768533ae46a41ef4a50d4a758e 368 PANTHER PTHR30486 1 368 4.1E-160 T 22-04-2016 VPUCM_RS08535 75cc056d92b51e1fede8ffcc0023d6df 232 Gene3D G3DSA:3.40.50.620 1 212 8.3E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS08535 75cc056d92b51e1fede8ffcc0023d6df 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.273 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VPUCM_RS08535 75cc056d92b51e1fede8ffcc0023d6df 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.8E-84 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VPUCM_RS08535 75cc056d92b51e1fede8ffcc0023d6df 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.1E-85 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VPUCM_RS08535 75cc056d92b51e1fede8ffcc0023d6df 232 SUPERFAMILY SSF52402 1 211 2.43E-67 T 22-04-2016 VPUCM_RS08535 75cc056d92b51e1fede8ffcc0023d6df 232 PANTHER PTHR11587 1 212 6.2E-103 T 22-04-2016 VPUCM_RS08535 75cc056d92b51e1fede8ffcc0023d6df 232 PANTHER PTHR11587:SF3 1 212 6.2E-103 T 22-04-2016 VPUCM_RS08535 75cc056d92b51e1fede8ffcc0023d6df 232 PIRSF PIRSF006293 1 225 5.0E-84 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 Pfam PF00672 HAMP domain 153 217 4.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 PANTHER PTHR24423 163 428 5.8E-58 T 22-04-2016 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 SMART SM00388 222 282 2.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 SUPERFAMILY SSF158472 171 219 7.06E-5 T 22-04-2016 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 6.9E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 SUPERFAMILY SSF55874 285 429 4.98E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 Gene3D G3DSA:1.10.287.130 213 276 5.4E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 SMART SM00387 321 430 3.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 Gene3D G3DSA:3.30.565.10 285 429 1.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00775 f0141c75d5a50d05d42d065b84f82986 430 SMART SM00304 169 221 9.5E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 Gene3D G3DSA:3.40.190.10 159 319 4.9E-10 T 22-04-2016 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 Gene3D G3DSA:3.40.190.10 320 360 1.2E-18 T 22-04-2016 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 Gene3D G3DSA:3.40.190.10 37 157 1.2E-18 T 22-04-2016 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 PANTHER PTHR30006 3 212 6.5E-150 T 22-04-2016 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 PANTHER PTHR30006 230 386 6.5E-150 T 22-04-2016 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 PANTHER PTHR30006:SF12 3 212 6.5E-150 T 22-04-2016 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 PANTHER PTHR30006:SF12 230 386 6.5E-150 T 22-04-2016 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 PIRSF PIRSF029172 1 386 8.2E-179 T 22-04-2016 IPR027020 Protein ynjB VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 SUPERFAMILY SSF53850 38 384 8.51E-40 T 22-04-2016 VPUCM_RS10045 78439ec5b2d48e727d9937b1ece7d467 386 Pfam PF13416 Bacterial extracellular solute-binding protein 61 353 9.1E-22 T 22-04-2016 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.7E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 SUPERFAMILY SSF51569 7 335 2.2E-145 T 22-04-2016 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 7.1E-142 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PIRSF PIRSF001415 2 336 1.8E-152 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 SMART SM01004 9 333 9.1E-246 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 Gene3D G3DSA:3.20.20.70 8 336 5.6E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PANTHER PTHR11458 9 342 3.3E-190 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS00530 032abbf7cdc77cf75eeb2ef17f3be5d4 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS05095 62aea81ef3e29c1ecb3e58024dbe2b12 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.5E-85 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VPUCM_RS05095 62aea81ef3e29c1ecb3e58024dbe2b12 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 4.7E-117 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VPUCM_RS05095 62aea81ef3e29c1ecb3e58024dbe2b12 453 PIRSF PIRSF006066 1 447 1.1E-136 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VPUCM_RS05095 62aea81ef3e29c1ecb3e58024dbe2b12 453 PANTHER PTHR33362 1 451 6.2E-243 T 22-04-2016 VPUCM_RS05095 62aea81ef3e29c1ecb3e58024dbe2b12 453 PANTHER PTHR33362:SF6 1 451 6.2E-243 T 22-04-2016 VPUCM_RS00725 dd1bc7fa4231c56927728a48d89cfc18 189 PANTHER PTHR11839:SF12 1 176 4.9E-94 T 22-04-2016 VPUCM_RS00725 dd1bc7fa4231c56927728a48d89cfc18 189 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VPUCM_RS00725 dd1bc7fa4231c56927728a48d89cfc18 189 PANTHER PTHR11839 1 176 4.9E-94 T 22-04-2016 VPUCM_RS00725 dd1bc7fa4231c56927728a48d89cfc18 189 Gene3D G3DSA:3.90.79.10 8 183 8.8E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS00725 dd1bc7fa4231c56927728a48d89cfc18 189 Pfam PF00293 NUDIX domain 46 154 7.8E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS00725 dd1bc7fa4231c56927728a48d89cfc18 189 SUPERFAMILY SSF55811 4 181 1.04E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS10225 d159bdae002d54c547c820767a86c00a 270 PANTHER PTHR30028:SF0 1 242 2.4E-58 T 22-04-2016 IPR005226 UPF0014 family VPUCM_RS10225 d159bdae002d54c547c820767a86c00a 270 PANTHER PTHR30028 1 242 2.4E-58 T 22-04-2016 VPUCM_RS10225 d159bdae002d54c547c820767a86c00a 270 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 2.6E-71 T 22-04-2016 IPR005226 UPF0014 family VPUCM_RS11450 4e264910174ce4a4f796911571b627c4 161 Gene3D G3DSA:2.40.50.140 26 130 3.2E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS11450 4e264910174ce4a4f796911571b627c4 161 PANTHER PTHR34128:SF1 1 161 6.4E-77 T 22-04-2016 VPUCM_RS11450 4e264910174ce4a4f796911571b627c4 161 PANTHER PTHR34128 1 161 6.4E-77 T 22-04-2016 VPUCM_RS11450 4e264910174ce4a4f796911571b627c4 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.123 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VPUCM_RS11450 4e264910174ce4a4f796911571b627c4 161 Pfam PF03100 CcmE 4 136 2.5E-44 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VPUCM_RS11450 4e264910174ce4a4f796911571b627c4 161 SUPERFAMILY SSF82093 30 142 4.32E-38 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VPUCM_RS12455 8ba9d76a2735b3a9722db6d5f14d4b35 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.1E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VPUCM_RS12455 8ba9d76a2735b3a9722db6d5f14d4b35 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.0E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VPUCM_RS12455 8ba9d76a2735b3a9722db6d5f14d4b35 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site VPUCM_RS12455 8ba9d76a2735b3a9722db6d5f14d4b35 154 PANTHER PTHR22881 1 153 1.8E-66 T 22-04-2016 VPUCM_RS12455 8ba9d76a2735b3a9722db6d5f14d4b35 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.576 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VPUCM_RS12455 8ba9d76a2735b3a9722db6d5f14d4b35 154 Gene3D G3DSA:3.40.390.30 12 152 1.3E-50 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 VPUCM_RS12455 8ba9d76a2735b3a9722db6d5f14d4b35 154 SUPERFAMILY SSF55486 3 150 2.12E-49 T 22-04-2016 VPUCM_RS11640 0ed83e92d62445b72dce7419835908de 144 PANTHER PTHR37166:SF1 18 144 3.7E-21 T 22-04-2016 VPUCM_RS11640 0ed83e92d62445b72dce7419835908de 144 Gene3D G3DSA:3.30.160.170 58 140 3.8E-24 T 22-04-2016 IPR005186 FlaG protein VPUCM_RS11640 0ed83e92d62445b72dce7419835908de 144 PANTHER PTHR37166 18 144 3.7E-21 T 22-04-2016 VPUCM_RS11640 0ed83e92d62445b72dce7419835908de 144 SUPERFAMILY SSF160214 62 143 2.88E-22 T 22-04-2016 IPR005186 FlaG protein VPUCM_RS11640 0ed83e92d62445b72dce7419835908de 144 Pfam PF03646 FlaG protein 43 142 1.2E-24 T 22-04-2016 IPR005186 FlaG protein VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50104 1 65 5.78E-12 T 22-04-2016 IPR008991 Translation protein SH3-like domain VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 SMART SM00841 132 187 2.7E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.30.30.30 1 65 7.5E-16 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50249 132 188 2.06E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.3E-17 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 PIRSF PIRSF005901 1 188 7.4E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 45.647 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 PANTHER PTHR30053:SF5 1 188 1.5E-102 T 22-04-2016 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50249 67 129 1.84E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 5.0E-19 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.40.50.140 131 188 7.6E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 SMART SM01185 69 124 4.8E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 PANTHER PTHR30053 1 188 1.5E-102 T 22-04-2016 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 4.6E-90 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.0E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VPUCM_RS06390 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.40.50.140 67 129 1.5E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS12265 96f2b0134cc60e5fc4a8bff8a23a9528 157 Gene3D G3DSA:3.90.960.10 1 156 5.9E-59 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS12265 96f2b0134cc60e5fc4a8bff8a23a9528 157 PIRSF PIRSF006181 1 157 9.3E-54 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VPUCM_RS12265 96f2b0134cc60e5fc4a8bff8a23a9528 157 SUPERFAMILY SSF55826 2 156 1.2E-43 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS12265 96f2b0134cc60e5fc4a8bff8a23a9528 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 2.4E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS12265 96f2b0134cc60e5fc4a8bff8a23a9528 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.2E-59 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VPUCM_RS12265 96f2b0134cc60e5fc4a8bff8a23a9528 157 PANTHER PTHR30411 1 156 1.1E-67 T 22-04-2016 VPUCM_RS12265 96f2b0134cc60e5fc4a8bff8a23a9528 157 PANTHER PTHR30411:SF0 1 156 1.1E-67 T 22-04-2016 VPUCM_RS12580 6147f9921031dff5849e0d9909b6628e 225 PANTHER PTHR30450:SF1 1 225 2.0E-118 T 22-04-2016 VPUCM_RS12580 6147f9921031dff5849e0d9909b6628e 225 PANTHER PTHR30450 1 225 2.0E-118 T 22-04-2016 VPUCM_RS12580 6147f9921031dff5849e0d9909b6628e 225 Gene3D G3DSA:1.10.3720.10 14 224 1.1E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12580 6147f9921031dff5849e0d9909b6628e 225 SUPERFAMILY SSF161098 15 210 4.84E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12580 6147f9921031dff5849e0d9909b6628e 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 8.2E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS04405 2f191b741626221d06acc9394748342b 199 Pfam PF01965 DJ-1/PfpI family 3 169 1.4E-40 T 22-04-2016 IPR002818 DJ-1/PfpI VPUCM_RS04405 2f191b741626221d06acc9394748342b 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 4.7E-63 T 22-04-2016 IPR006287 DJ-1 VPUCM_RS04405 2f191b741626221d06acc9394748342b 199 PANTHER PTHR11019 1 194 3.6E-61 T 22-04-2016 VPUCM_RS04405 2f191b741626221d06acc9394748342b 199 SUPERFAMILY SSF52317 3 190 1.83E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS04405 2f191b741626221d06acc9394748342b 199 Gene3D G3DSA:3.40.50.880 1 188 2.3E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS04405 2f191b741626221d06acc9394748342b 199 PANTHER PTHR11019:SF4 1 194 3.6E-61 T 22-04-2016 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 PANTHER PTHR10799:SF728 1 113 1.0E-27 T 22-04-2016 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 PANTHER PTHR10799:SF728 445 573 1.0E-27 T 22-04-2016 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00267 401 577 9.4E-65 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55785 266 392 1.24E-18 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 1.2E-49 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF08448 PAS fold 285 395 1.4E-13 T 22-04-2016 IPR013656 PAS fold-4 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 PANTHER PTHR10799 1 113 1.0E-27 T 22-04-2016 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 PANTHER PTHR10799 445 573 1.0E-27 T 22-04-2016 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.450.20 266 392 8.2E-19 T 22-04-2016 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 575 5.3E-48 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 38 108 28.0 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 158 223 22.0 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 279 346 0.075 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55785 150 251 9.42E-7 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55073 417 577 4.39E-47 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.70.270 414 577 2.1E-51 T 22-04-2016 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.450.20 212 264 5.9E-4 T 22-04-2016 VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 2.4E-14 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF13188 PAS domain 40 78 5.4E-4 T 22-04-2016 IPR000014 PAS domain VPUCM_RS02400 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.450.20 149 208 5.9E-5 T 22-04-2016 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 PANTHER PTHR32089:SF64 46 418 9.5E-118 T 22-04-2016 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 Pfam PF00672 HAMP domain 71 137 2.4E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 PANTHER PTHR32089 46 418 9.5E-118 T 22-04-2016 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 203 416 3.5E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 Gene3D G3DSA:1.10.287.950 174 386 2.6E-59 T 22-04-2016 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 3.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 3.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 3.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 SUPERFAMILY SSF58104 109 418 1.83E-75 T 22-04-2016 VPUCM_RS02090 bae31ddf1b90db83263cd91b6ef5ff17 418 SMART SM00283 156 417 2.1E-69 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS01600 890a20858a0a2cc2b389298930be76c3 291 PANTHER PTHR21091:SF16 36 271 1.6E-81 T 22-04-2016 VPUCM_RS01600 890a20858a0a2cc2b389298930be76c3 291 Gene3D G3DSA:3.30.950.10 153 285 2.3E-47 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VPUCM_RS01600 890a20858a0a2cc2b389298930be76c3 291 Gene3D G3DSA:3.40.1010.10 36 152 5.2E-47 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VPUCM_RS01600 890a20858a0a2cc2b389298930be76c3 291 PANTHER PTHR21091 36 271 1.6E-81 T 22-04-2016 VPUCM_RS01600 890a20858a0a2cc2b389298930be76c3 291 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 42 56 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VPUCM_RS01600 890a20858a0a2cc2b389298930be76c3 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 39 248 3.3E-46 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VPUCM_RS01600 890a20858a0a2cc2b389298930be76c3 291 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 37 270 1.4E-93 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VPUCM_RS01600 890a20858a0a2cc2b389298930be76c3 291 SUPERFAMILY SSF53790 33 279 6.02E-80 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VPUCM_RS15590 6ff32f4fcc6665e3a8bf0cb8dcf1a56d 842 PANTHER PTHR38760 2 829 0.0 T 22-04-2016 VPUCM_RS15590 6ff32f4fcc6665e3a8bf0cb8dcf1a56d 842 Pfam PF12633 Adenylate cyclase NT domain 7 198 4.2E-77 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VPUCM_RS15590 6ff32f4fcc6665e3a8bf0cb8dcf1a56d 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 4.2E-254 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VPUCM_RS15590 6ff32f4fcc6665e3a8bf0cb8dcf1a56d 842 PIRSF PIRSF001444 1 842 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VPUCM_RS12670 36f7c2168aad4b08c8b9f9534f758b52 294 Gene3D G3DSA:1.10.600.10 2 292 9.3E-92 T 22-04-2016 IPR008949 Isoprenoid synthase domain VPUCM_RS12670 36f7c2168aad4b08c8b9f9534f758b52 294 PANTHER PTHR12001 21 273 1.2E-104 T 22-04-2016 IPR017446 Polyprenyl synthetase-related VPUCM_RS12670 36f7c2168aad4b08c8b9f9534f758b52 294 SUPERFAMILY SSF48576 3 285 1.15E-85 T 22-04-2016 IPR008949 Isoprenoid synthase domain VPUCM_RS12670 36f7c2168aad4b08c8b9f9534f758b52 294 Pfam PF00348 Polyprenyl synthetase 29 270 1.3E-57 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VPUCM_RS12670 36f7c2168aad4b08c8b9f9534f758b52 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VPUCM_RS12670 36f7c2168aad4b08c8b9f9534f758b52 294 PANTHER PTHR12001:SF23 21 273 1.2E-104 T 22-04-2016 VPUCM_RS12670 36f7c2168aad4b08c8b9f9534f758b52 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 3.4E-23 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 268 2.3E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 PANTHER PTHR33121 504 809 3.3E-87 T 22-04-2016 VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SMART SM00091 146 212 2.4 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SMART SM00091 269 336 1.5E-8 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 Gene3D G3DSA:3.30.70.270 396 559 1.0E-49 T 22-04-2016 VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SMART SM00052 562 808 7.0E-117 T 22-04-2016 IPR001633 EAL domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 Pfam PF13426 PAS domain 280 381 6.9E-19 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 Pfam PF08448 PAS fold 156 262 1.8E-11 T 22-04-2016 IPR013656 PAS fold-4 VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SMART SM00086 341 383 9.5E-7 T 22-04-2016 IPR001610 PAC motif VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SMART SM00086 219 261 3.9 T 22-04-2016 IPR001610 PAC motif VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 550 2.1E-38 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 PANTHER PTHR33121:SF13 504 809 3.3E-87 T 22-04-2016 VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 547 4.6E-43 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 Gene3D G3DSA:3.20.20.450 566 809 4.8E-95 T 22-04-2016 IPR001633 EAL domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SUPERFAMILY SSF55073 399 554 2.51E-45 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SUPERFAMILY SSF55785 152 262 8.2E-17 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 Gene3D G3DSA:3.30.450.20 259 377 1.4E-29 T 22-04-2016 VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 Pfam PF00563 EAL domain 568 803 3.1E-72 T 22-04-2016 IPR001633 EAL domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 Gene3D G3DSA:3.30.450.20 147 258 1.9E-16 T 22-04-2016 VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SUPERFAMILY SSF55785 277 380 2.97E-28 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SMART SM00267 383 552 1.1E-60 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS00480 3343d078a485b500cda05431cdff95a5 811 SUPERFAMILY SSF141868 568 809 1.7E-87 T 22-04-2016 IPR001633 EAL domain VPUCM_RS09255 d46bb42928152711c293791b158b262e 181 PANTHER PTHR13256:SF43 1 174 1.9E-53 T 22-04-2016 VPUCM_RS09255 d46bb42928152711c293791b158b262e 181 Gene3D G3DSA:3.40.630.30 3 175 1.2E-52 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS09255 d46bb42928152711c293791b158b262e 181 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 5.0E-31 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS09255 d46bb42928152711c293791b158b262e 181 SUPERFAMILY SSF55729 3 174 8.89E-50 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS09255 d46bb42928152711c293791b158b262e 181 PANTHER PTHR13256 1 174 1.9E-53 T 22-04-2016 VPUCM_RS13195 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VPUCM_RS13195 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.524 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VPUCM_RS13195 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 22-04-2016 VPUCM_RS13195 84478de520e13c85d4054d4cf84fd9d1 65 PANTHER PTHR34984:SF1 1 55 1.5E-31 T 22-04-2016 VPUCM_RS13195 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.1E-26 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VPUCM_RS13195 84478de520e13c85d4054d4cf84fd9d1 65 PANTHER PTHR34984 1 55 1.5E-31 T 22-04-2016 VPUCM_RS13195 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VPUCM_RS06580 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 Gene3D G3DSA:3.60.15.10 3 213 1.8E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS06580 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 PANTHER PTHR11935:SF115 1 215 6.4E-123 T 22-04-2016 VPUCM_RS06580 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 3.5E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS06580 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 SMART SM00849 14 195 2.3E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS06580 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 PANTHER PTHR11935 1 215 6.4E-123 T 22-04-2016 VPUCM_RS06580 0ac7ae0f1530e7cb91269ff4c66e6cc1 218 SUPERFAMILY SSF56281 5 211 9.48E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 Gene3D G3DSA:3.60.20.10 2 188 3.1E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 SUPERFAMILY SSF52402 208 482 6.81E-74 T 22-04-2016 VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 1.2E-115 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 PANTHER PTHR11772:SF11 2 538 7.6E-293 T 22-04-2016 VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 Gene3D G3DSA:3.40.50.620 196 510 1.4E-114 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 PANTHER PTHR11772 2 538 7.6E-293 T 22-04-2016 VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 SUPERFAMILY SSF56235 1 196 1.8E-56 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 6.7E-40 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 Pfam PF00733 Asparagine synthase 211 366 4.7E-55 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VPUCM_RS11895 d79c197924aad225e6655b213593a2af 554 Pfam PF00733 Asparagine synthase 367 511 2.2E-40 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VPUCM_RS11970 79cc51074a7bf2be34f6f696916232f0 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.0E-103 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 VPUCM_RS11970 79cc51074a7bf2be34f6f696916232f0 305 PANTHER PTHR11092:SF0 1 305 1.7E-139 T 22-04-2016 VPUCM_RS11970 79cc51074a7bf2be34f6f696916232f0 305 PANTHER PTHR11092 1 305 1.7E-139 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 VPUCM_RS11970 79cc51074a7bf2be34f6f696916232f0 305 Gene3D G3DSA:3.40.50.720 1 201 1.1E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11970 79cc51074a7bf2be34f6f696916232f0 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 3.6E-23 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VPUCM_RS11970 79cc51074a7bf2be34f6f696916232f0 305 Gene3D G3DSA:3.90.25.10 202 289 7.9E-9 T 22-04-2016 VPUCM_RS11970 79cc51074a7bf2be34f6f696916232f0 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.2E-15 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 VPUCM_RS11970 79cc51074a7bf2be34f6f696916232f0 305 SUPERFAMILY SSF51735 1 300 1.21E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08330 80c3c516bc4a1727300c11d15ddc349f 574 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 555 574 0.001 T 22-04-2016 IPR020008 GlyGly-CTERM domain VPUCM_RS08330 80c3c516bc4a1727300c11d15ddc349f 574 Pfam PF11949 Protein of unknown function (DUF3466) 6 198 2.9E-7 T 22-04-2016 IPR022562 Protein of unknown function DUF3466 VPUCM_RS08330 80c3c516bc4a1727300c11d15ddc349f 574 Pfam PF11949 Protein of unknown function (DUF3466) 252 574 1.1E-52 T 22-04-2016 IPR022562 Protein of unknown function DUF3466 VPUCM_RS09495 d3481e4db29d40e846d5404e696ab190 177 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 174 3.2E-59 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VPUCM_RS09495 d3481e4db29d40e846d5404e696ab190 177 Gene3D G3DSA:3.40.50.300 3 176 7.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09495 d3481e4db29d40e846d5404e696ab190 177 SUPERFAMILY SSF52540 4 176 4.46E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09495 d3481e4db29d40e846d5404e696ab190 177 PIRSF PIRSF006135 1 177 1.2E-53 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VPUCM_RS09495 d3481e4db29d40e846d5404e696ab190 177 PANTHER PTHR34848 1 177 1.0E-64 T 22-04-2016 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 Gene3D G3DSA:2.40.30.20 1 93 5.0E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.3E-251 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 SUPERFAMILY SSF52540 96 381 7.31E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 6.8E-14 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 Gene3D G3DSA:3.40.50.300 94 382 6.7E-112 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 8.0E-72 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 Gene3D G3DSA:1.20.150.20 383 510 1.5E-47 T 22-04-2016 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 PANTHER PTHR15184 1 496 1.7E-290 T 22-04-2016 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 SUPERFAMILY SSF47917 383 511 8.63E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.5E-44 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 PANTHER PTHR15184:SF3 1 496 1.7E-290 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS16020 290a42e321761010836e7268c9b99711 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.733 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 Gene3D G3DSA:1.10.10.10 7 77 1.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 PANTHER PTHR11751 93 115 4.5E-47 T 22-04-2016 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 PANTHER PTHR11751 1 77 4.5E-47 T 22-04-2016 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 Gene3D G3DSA:1.20.120.530 98 238 9.3E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 Pfam PF07729 FCD domain 99 226 2.0E-18 T 22-04-2016 IPR011711 GntR, C-terminal VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 PANTHER PTHR11751:SF355 93 115 4.5E-47 T 22-04-2016 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 PANTHER PTHR11751:SF355 1 77 4.5E-47 T 22-04-2016 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 SMART SM00345 15 74 9.1E-28 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.3E-25 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 SMART SM00895 99 227 3.6E-18 T 22-04-2016 IPR011711 GntR, C-terminal VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 SUPERFAMILY SSF46785 5 76 2.06E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13015 6f60030e8bc91aeb5afd6d326225c660 255 SUPERFAMILY SSF48008 98 235 1.67E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS14790 8e1224da3aeccf8e366b2ea501b33176 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.091 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 VPUCM_RS14790 8e1224da3aeccf8e366b2ea501b33176 181 Gene3D G3DSA:3.30.420.10 4 180 1.1E-75 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS14790 8e1224da3aeccf8e366b2ea501b33176 181 Pfam PF00929 Exonuclease 9 170 1.2E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS14790 8e1224da3aeccf8e366b2ea501b33176 181 SMART SM00479 7 180 8.5E-24 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS14790 8e1224da3aeccf8e366b2ea501b33176 181 SUPERFAMILY SSF53098 3 180 4.91E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS14790 8e1224da3aeccf8e366b2ea501b33176 181 PANTHER PTHR11046:SF1 5 181 1.9E-121 T 22-04-2016 VPUCM_RS14790 8e1224da3aeccf8e366b2ea501b33176 181 PANTHER PTHR11046 5 181 1.9E-121 T 22-04-2016 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 PANTHER PTHR31964:SF41 245 313 3.9E-66 T 22-04-2016 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 PANTHER PTHR31964:SF41 1 90 3.9E-66 T 22-04-2016 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 Pfam PF00582 Universal stress protein family 177 301 1.3E-15 T 22-04-2016 IPR006016 UspA GO:0006950 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 Pfam PF00582 Universal stress protein family 4 148 1.0E-14 T 22-04-2016 IPR006016 UspA GO:0006950 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 PANTHER PTHR31964 245 313 3.9E-66 T 22-04-2016 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 PANTHER PTHR31964 1 90 3.9E-66 T 22-04-2016 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 SUPERFAMILY SSF52402 4 158 4.02E-26 T 22-04-2016 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 SUPERFAMILY SSF52402 158 308 2.76E-24 T 22-04-2016 VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 Gene3D G3DSA:3.40.50.620 142 300 7.8E-25 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS08135 c203788d58cd1df88901c6707696cd66 315 Gene3D G3DSA:3.40.50.620 4 141 5.8E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS03175 fdee00bbd25a55f37ae79313cb5af341 443 Pfam PF00202 Aminotransferase class-III 13 434 3.1E-111 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS03175 fdee00bbd25a55f37ae79313cb5af341 443 PIRSF PIRSF000521 1 438 3.4E-33 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS03175 fdee00bbd25a55f37ae79313cb5af341 443 PANTHER PTHR11986 6 443 7.7E-186 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS03175 fdee00bbd25a55f37ae79313cb5af341 443 Gene3D G3DSA:3.40.640.10 48 310 3.6E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS03175 fdee00bbd25a55f37ae79313cb5af341 443 SUPERFAMILY SSF53383 7 437 7.69E-123 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS03175 fdee00bbd25a55f37ae79313cb5af341 443 Gene3D G3DSA:3.90.1150.10 311 438 2.8E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS03175 fdee00bbd25a55f37ae79313cb5af341 443 PANTHER PTHR11986:SF78 6 443 7.7E-186 T 22-04-2016 VPUCM_RS03175 fdee00bbd25a55f37ae79313cb5af341 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS00860 aab6e6e6ce62880787ed051789a0ef72 608 Gene3D G3DSA:3.90.76.10 80 164 2.3E-19 T 22-04-2016 VPUCM_RS00860 aab6e6e6ce62880787ed051789a0ef72 608 PANTHER PTHR30290 1 580 1.1E-61 T 22-04-2016 VPUCM_RS00860 aab6e6e6ce62880787ed051789a0ef72 608 Gene3D G3DSA:3.40.190.10 165 331 1.7E-13 T 22-04-2016 VPUCM_RS00860 aab6e6e6ce62880787ed051789a0ef72 608 PIRSF PIRSF002741 1 563 3.9E-66 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VPUCM_RS00860 aab6e6e6ce62880787ed051789a0ef72 608 SUPERFAMILY SSF53850 41 561 3.56E-93 T 22-04-2016 VPUCM_RS00860 aab6e6e6ce62880787ed051789a0ef72 608 Gene3D G3DSA:3.10.105.10 332 535 2.2E-38 T 22-04-2016 VPUCM_RS00860 aab6e6e6ce62880787ed051789a0ef72 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 4.2E-55 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VPUCM_RS00850 887d509487a9266f6585abbf5b0ab4eb 341 PANTHER PTHR30465 1 339 3.6E-122 T 22-04-2016 VPUCM_RS00850 887d509487a9266f6585abbf5b0ab4eb 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 2.4E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00850 887d509487a9266f6585abbf5b0ab4eb 341 PANTHER PTHR30465:SF66 1 339 3.6E-122 T 22-04-2016 VPUCM_RS00850 887d509487a9266f6585abbf5b0ab4eb 341 SUPERFAMILY SSF161098 107 321 3.01E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00850 887d509487a9266f6585abbf5b0ab4eb 341 Gene3D G3DSA:1.10.3720.10 107 328 6.3E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00560 354aaa76e5b5985f45aac0509744cdb1 212 Gene3D G3DSA:3.40.50.150 47 92 3.6E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00560 354aaa76e5b5985f45aac0509744cdb1 212 Gene3D G3DSA:3.40.50.150 93 198 2.2E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00560 354aaa76e5b5985f45aac0509744cdb1 212 SUPERFAMILY SSF53335 47 199 1.34E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00560 354aaa76e5b5985f45aac0509744cdb1 212 Pfam PF13489 Methyltransferase domain 63 192 9.9E-19 T 22-04-2016 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 9.1E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.297 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 SUPERFAMILY SSF50104 2 115 1.81E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 Pfam PF01245 Ribosomal protein L19 3 113 4.2E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 PANTHER PTHR15680 1 117 2.2E-56 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 PIRSF PIRSF002191 1 117 3.8E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.7E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.7E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.7E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13065 443d5e413515bcbb4e5c5095f1d00eb0 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS03730 bd15db5588a42db904d12e3f6611eed0 230 PANTHER PTHR35272 31 230 1.4E-20 T 22-04-2016 VPUCM_RS03730 bd15db5588a42db904d12e3f6611eed0 230 Pfam PF13098 Thioredoxin-like domain 106 214 8.7E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS03730 bd15db5588a42db904d12e3f6611eed0 230 SUPERFAMILY SSF54423 30 74 2.16E-8 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VPUCM_RS03730 bd15db5588a42db904d12e3f6611eed0 230 Pfam PF10411 Disulfide bond isomerase protein N-terminus 30 72 6.4E-8 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VPUCM_RS03730 bd15db5588a42db904d12e3f6611eed0 230 Gene3D G3DSA:3.40.30.10 106 227 3.3E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS03730 bd15db5588a42db904d12e3f6611eed0 230 SUPERFAMILY SSF52833 61 219 1.68E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS03730 bd15db5588a42db904d12e3f6611eed0 230 Gene3D G3DSA:3.10.450.70 30 76 1.5E-11 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VPUCM_RS08430 4df935779c69a7777ec99474ad9074a0 160 PANTHER PTHR30476 1 160 2.3E-89 T 22-04-2016 VPUCM_RS08430 4df935779c69a7777ec99474ad9074a0 160 SUPERFAMILY SSF89963 88 160 7.32E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VPUCM_RS08430 4df935779c69a7777ec99474ad9074a0 160 Gene3D G3DSA:3.30.70.860 95 160 2.1E-34 T 22-04-2016 VPUCM_RS08430 4df935779c69a7777ec99474ad9074a0 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 8.1E-65 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VPUCM_RS08430 4df935779c69a7777ec99474ad9074a0 160 SUPERFAMILY SSF89963 2 86 7.59E-31 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VPUCM_RS08430 4df935779c69a7777ec99474ad9074a0 160 Gene3D G3DSA:3.30.70.990 9 94 2.0E-31 T 22-04-2016 VPUCM_RS08430 4df935779c69a7777ec99474ad9074a0 160 PANTHER PTHR30476:SF0 1 160 2.3E-89 T 22-04-2016 VPUCM_RS08430 4df935779c69a7777ec99474ad9074a0 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.761 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VPUCM_RS13950 4abbb43ad4f9138fbc24759a92c25f91 321 PANTHER PTHR10846 5 316 2.9E-76 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VPUCM_RS13950 4abbb43ad4f9138fbc24759a92c25f91 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 5.9E-29 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VPUCM_RS13950 4abbb43ad4f9138fbc24759a92c25f91 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 5.0E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VPUCM_RS13950 4abbb43ad4f9138fbc24759a92c25f91 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.4E-83 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 Pfam PF02954 Bacterial regulatory protein, Fis family 160 199 1.1E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 Pfam PF00158 Sigma-54 interaction domain 3 69 2.6E-9 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 PANTHER PTHR32071 2 200 2.6E-102 T 22-04-2016 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 Gene3D G3DSA:3.40.50.300 3 75 1.7E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 183 200 8.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 166 183 8.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 SUPERFAMILY SSF52540 2 144 4.04E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 PANTHER PTHR32071:SF34 2 200 2.6E-102 T 22-04-2016 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 Gene3D G3DSA:1.10.8.60 76 147 3.9E-24 T 22-04-2016 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 Gene3D G3DSA:1.10.10.60 148 200 2.8E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 SUPERFAMILY SSF46689 116 200 6.91E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS18650 eb6b0183271f5df9e75a05da9c44425c 200 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 116 125 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS02600 83151c744029396f73fa497014920730 86 Gene3D G3DSA:1.20.58.110 1 86 1.0E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS02600 83151c744029396f73fa497014920730 86 SUPERFAMILY SSF46992 3 86 1.1E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS02600 83151c744029396f73fa497014920730 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.696 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS02600 83151c744029396f73fa497014920730 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.9E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS02600 83151c744029396f73fa497014920730 86 PANTHER PTHR33398 2 86 1.2E-39 T 22-04-2016 VPUCM_RS02600 83151c744029396f73fa497014920730 86 Pfam PF01649 Ribosomal protein S20 2 84 6.2E-29 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS02600 83151c744029396f73fa497014920730 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS07140 cba42db94ba21e7f94f49258ca198747 155 SMART SM00357 2 65 6.4E-10 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VPUCM_RS07140 cba42db94ba21e7f94f49258ca198747 155 Pfam PF05901 Excalibur calcium-binding domain 115 148 3.5E-10 T 22-04-2016 IPR008613 Excalibur calcium-binding domain VPUCM_RS07140 cba42db94ba21e7f94f49258ca198747 155 SUPERFAMILY SSF50249 3 65 6.86E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS07140 cba42db94ba21e7f94f49258ca198747 155 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 33 - T 22-04-2016 IPR019844 Cold-shock conserved site VPUCM_RS07140 cba42db94ba21e7f94f49258ca198747 155 Gene3D G3DSA:2.40.50.140 1 68 3.4E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS07140 cba42db94ba21e7f94f49258ca198747 155 Pfam PF00313 'Cold-shock' DNA-binding domain 5 60 2.2E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 PANTHER PTHR30537 1 298 4.3E-108 T 22-04-2016 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 Pfam PF03466 LysR substrate binding domain 93 301 1.6E-29 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 SUPERFAMILY SSF53850 93 303 5.79E-35 T 22-04-2016 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 PANTHER PTHR30537:SF1 1 298 4.3E-108 T 22-04-2016 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 SUPERFAMILY SSF46785 10 116 1.59E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 Gene3D G3DSA:1.10.10.10 9 90 1.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 Gene3D G3DSA:3.40.190.10 97 183 2.7E-19 T 22-04-2016 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS08725 8462e6c46ea6eee383b968397ad663d7 305 Gene3D G3DSA:3.40.190.10 184 269 2.0E-14 T 22-04-2016 VPUCM_RS04650 b45bc380a9a54acf4e3777a20955ebe0 251 SUPERFAMILY SSF64005 9 234 5.1E-87 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VPUCM_RS04650 b45bc380a9a54acf4e3777a20955ebe0 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 VPUCM_RS04650 b45bc380a9a54acf4e3777a20955ebe0 251 PANTHER PTHR10291 11 251 7.8E-121 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VPUCM_RS04650 b45bc380a9a54acf4e3777a20955ebe0 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.5 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VPUCM_RS04650 b45bc380a9a54acf4e3777a20955ebe0 251 Gene3D G3DSA:3.40.1180.10 9 245 1.7E-97 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VPUCM_RS04650 b45bc380a9a54acf4e3777a20955ebe0 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 2.5E-93 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VPUCM_RS04650 b45bc380a9a54acf4e3777a20955ebe0 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 6.8E-80 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VPUCM_RS06160 d9516475dddb81df2a80b7f650efda28 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.291 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 VPUCM_RS06160 d9516475dddb81df2a80b7f650efda28 167 Gene3D G3DSA:3.10.450.50 3 167 4.3E-56 T 22-04-2016 IPR032710 NTF2-like domain VPUCM_RS06160 d9516475dddb81df2a80b7f650efda28 167 PANTHER PTHR33747 9 167 1.6E-31 T 22-04-2016 VPUCM_RS06160 d9516475dddb81df2a80b7f650efda28 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 22-04-2016 VPUCM_RS06160 d9516475dddb81df2a80b7f650efda28 167 Pfam PF02810 SEC-C motif 4 18 1.2E-4 T 22-04-2016 IPR004027 SEC-C motif VPUCM_RS06160 d9516475dddb81df2a80b7f650efda28 167 Pfam PF02810 SEC-C motif 150 167 4.2E-10 T 22-04-2016 IPR004027 SEC-C motif VPUCM_RS06160 d9516475dddb81df2a80b7f650efda28 167 PANTHER PTHR33747:SF1 9 167 1.6E-31 T 22-04-2016 VPUCM_RS06160 d9516475dddb81df2a80b7f650efda28 167 SUPERFAMILY SSF54427 28 128 6.57E-34 T 22-04-2016 IPR032710 NTF2-like domain VPUCM_RS10375 c112dcf7fa6131d5487b8bbbc46e9c20 203 PANTHER PTHR33751 27 202 3.0E-45 T 22-04-2016 VPUCM_RS10375 c112dcf7fa6131d5487b8bbbc46e9c20 203 SUPERFAMILY SSF46626 120 201 2.62E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10375 c112dcf7fa6131d5487b8bbbc46e9c20 203 Gene3D G3DSA:1.10.760.10 121 201 6.4E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10375 c112dcf7fa6131d5487b8bbbc46e9c20 203 Gene3D G3DSA:1.10.760.10 27 98 2.8E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10375 c112dcf7fa6131d5487b8bbbc46e9c20 203 PIRSF PIRSF000005 1 203 2.5E-62 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VPUCM_RS10375 c112dcf7fa6131d5487b8bbbc46e9c20 203 Pfam PF00034 Cytochrome c 133 201 2.1E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10375 c112dcf7fa6131d5487b8bbbc46e9c20 203 SUPERFAMILY SSF46626 27 96 4.24E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10375 c112dcf7fa6131d5487b8bbbc46e9c20 203 PANTHER PTHR33751:SF3 27 202 3.0E-45 T 22-04-2016 VPUCM_RS11740 f665c013110d751e0f7a9aa54b636556 116 PANTHER PTHR30041:SF4 1 116 2.4E-64 T 22-04-2016 VPUCM_RS11740 f665c013110d751e0f7a9aa54b636556 116 Pfam PF03960 ArsC family 6 115 4.0E-20 T 22-04-2016 IPR006660 Arsenate reductase-like VPUCM_RS11740 f665c013110d751e0f7a9aa54b636556 116 PANTHER PTHR30041 1 116 2.4E-64 T 22-04-2016 VPUCM_RS11740 f665c013110d751e0f7a9aa54b636556 116 SUPERFAMILY SSF52833 2 116 2.01E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11740 f665c013110d751e0f7a9aa54b636556 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 5.1E-48 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VPUCM_RS11740 f665c013110d751e0f7a9aa54b636556 116 Gene3D G3DSA:3.40.30.10 1 116 4.2E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS07920 387205274ae6586a7736ffb465896e31 239 SMART SM00382 29 202 9.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS07920 387205274ae6586a7736ffb465896e31 239 PANTHER PTHR24220 6 223 1.8E-125 T 22-04-2016 VPUCM_RS07920 387205274ae6586a7736ffb465896e31 239 SUPERFAMILY SSF52540 5 216 5.33E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07920 387205274ae6586a7736ffb465896e31 239 Gene3D G3DSA:3.40.50.300 5 217 3.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07920 387205274ae6586a7736ffb465896e31 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS07920 387205274ae6586a7736ffb465896e31 239 Pfam PF00005 ABC transporter 25 165 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS07920 387205274ae6586a7736ffb465896e31 239 PANTHER PTHR24220:SF542 6 223 1.8E-125 T 22-04-2016 VPUCM_RS03970 068220d33d88c6a469cb42673f9907ed 144 Pfam PF12760 Transposase zinc-ribbon domain 24 56 7.6E-6 T 22-04-2016 IPR024442 Transposase, zinc-ribbon VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 9.3E-48 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 SUPERFAMILY SSF52922 533 664 2.49E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 SUPERFAMILY SSF52518 333 525 7.7E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 PANTHER PTHR11624:SF85 1 309 0.0 T 22-04-2016 VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 PANTHER PTHR11624:SF85 333 663 0.0 T 22-04-2016 VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 PANTHER PTHR11624 1 309 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 PANTHER PTHR11624 333 663 0.0 T 22-04-2016 IPR033247 Transketolase family VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 SMART SM00861 354 525 1.0E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 Gene3D G3DSA:3.40.50.920 538 663 2.0E-52 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 Gene3D G3DSA:3.40.50.970 327 533 6.5E-81 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.5E-166 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 Gene3D G3DSA:3.40.50.970 4 318 9.5E-133 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 1.2E-21 T 22-04-2016 IPR033248 Transketolase, C-terminal domain VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VPUCM_RS13465 4ea9f8b7ce60f5d06e80003fc873cc2f 664 SUPERFAMILY SSF52518 6 319 2.95E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS08960 5081f8b4e49b28d499015833cbfd597d 553 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 2.5E-170 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VPUCM_RS08960 5081f8b4e49b28d499015833cbfd597d 553 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 2.0E-134 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VPUCM_RS08960 5081f8b4e49b28d499015833cbfd597d 553 PANTHER PTHR30047:SF2 13 543 1.8E-200 T 22-04-2016 VPUCM_RS08960 5081f8b4e49b28d499015833cbfd597d 553 PANTHER PTHR30047 13 543 1.8E-200 T 22-04-2016 VPUCM_RS04530 254648e2b42399eb5c1bafae5244ec4d 159 Gene3D G3DSA:3.10.50.30 81 158 5.0E-12 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VPUCM_RS04530 254648e2b42399eb5c1bafae5244ec4d 159 SUPERFAMILY SSF54534 83 158 2.09E-10 T 22-04-2016 VPUCM_RS04530 254648e2b42399eb5c1bafae5244ec4d 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 2.1E-7 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.018 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 PANTHER PTHR30307 2 345 3.6E-182 T 22-04-2016 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 7.6E-134 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 Gene3D G3DSA:2.40.10.240 64 143 6.0E-19 T 22-04-2016 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 SUPERFAMILY SSF111337 1 345 2.62E-138 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 PANTHER PTHR30307:SF0 2 345 3.6E-182 T 22-04-2016 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 Gene3D G3DSA:3.40.1780.10 1 62 5.7E-101 T 22-04-2016 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 Gene3D G3DSA:3.40.1780.10 179 345 5.7E-101 T 22-04-2016 VPUCM_RS02905 7d105d627bbfa9e0e65ea46b903cebcf 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 1.2E-159 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS04255 a5205348f310895763f9e674a828ed1f 234 PANTHER PTHR30231 10 234 2.6E-30 T 22-04-2016 VPUCM_RS04255 a5205348f310895763f9e674a828ed1f 234 Pfam PF00929 Exonuclease 49 211 5.2E-19 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS04255 a5205348f310895763f9e674a828ed1f 234 Gene3D G3DSA:3.30.420.10 44 216 6.7E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS04255 a5205348f310895763f9e674a828ed1f 234 SUPERFAMILY SSF53098 44 220 3.6E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS04255 a5205348f310895763f9e674a828ed1f 234 SMART SM00479 47 220 2.5E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.6E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 PANTHER PTHR11700 1 102 1.2E-54 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.33E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.33E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.33E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 3 102 1.1E-43 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VPUCM_RS01425 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 SMART SM00419 187 235 4.3E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 SUPERFAMILY SSF51206 23 162 1.44E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 Gene3D G3DSA:2.60.120.10 18 169 4.7E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 SUPERFAMILY SSF46785 165 245 1.95E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 PANTHER PTHR24567 1 248 9.2E-133 T 22-04-2016 VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 SMART SM00100 30 151 2.0E-20 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 PANTHER PTHR24567:SF28 1 248 9.2E-133 T 22-04-2016 VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 Gene3D G3DSA:1.10.10.10 170 244 4.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 2.1E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VPUCM_RS08140 0943d6a46cf90b8ea7b7c9856640d9af 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.4E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 SMART SM00862 150 225 1.3E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 SUPERFAMILY SSF52172 3 183 4.83E-43 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 PANTHER PTHR26402 3 225 4.6E-152 T 22-04-2016 VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 Gene3D G3DSA:3.40.50.2300 2 124 1.3E-41 T 22-04-2016 VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.9E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 Gene3D G3DSA:1.10.10.10 129 227 9.0E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.9E-113 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 PANTHER PTHR26402:SF576 3 225 4.6E-152 T 22-04-2016 VPUCM_RS02820 2b4a7ed319b95708bc48bfbb61a89ed1 229 SMART SM00448 3 116 1.9E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS05180 fce279d4aa911dc67d4943fba9e387cd 435 Pfam PF00425 chorismate binding enzyme 165 417 3.1E-71 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VPUCM_RS05180 fce279d4aa911dc67d4943fba9e387cd 435 Gene3D G3DSA:3.60.120.10 15 426 1.1E-89 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VPUCM_RS05180 fce279d4aa911dc67d4943fba9e387cd 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 7.5E-103 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VPUCM_RS05180 fce279d4aa911dc67d4943fba9e387cd 435 PANTHER PTHR11236 38 425 8.4E-126 T 22-04-2016 VPUCM_RS05180 fce279d4aa911dc67d4943fba9e387cd 435 SUPERFAMILY SSF56322 30 425 2.35E-99 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VPUCM_RS05180 fce279d4aa911dc67d4943fba9e387cd 435 PANTHER PTHR11236:SF3 38 425 8.4E-126 T 22-04-2016 VPUCM_RS05180 fce279d4aa911dc67d4943fba9e387cd 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 4 427 36.9 T 22-04-2016 VPUCM_RS07615 14d18b290a9ffa91d9f251897f12d2f7 137 Gene3D G3DSA:3.90.79.10 5 109 1.1E-12 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS07615 14d18b290a9ffa91d9f251897f12d2f7 137 SUPERFAMILY SSF55811 5 118 1.31E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS07615 14d18b290a9ffa91d9f251897f12d2f7 137 Pfam PF00293 NUDIX domain 8 82 3.1E-8 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS09370 d37448a3311220209773ae337f013f7d 282 Gene3D G3DSA:1.10.3720.10 20 274 2.2E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09370 d37448a3311220209773ae337f013f7d 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 1.2E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09370 d37448a3311220209773ae337f013f7d 282 SUPERFAMILY SSF161098 10 279 4.06E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09370 d37448a3311220209773ae337f013f7d 282 PANTHER PTHR30193 10 282 2.3E-75 T 22-04-2016 VPUCM_RS09370 d37448a3311220209773ae337f013f7d 282 PANTHER PTHR30193:SF20 10 282 2.3E-75 T 22-04-2016 VPUCM_RS06025 d19333d2cbb1e4551c7f9998ec91e415 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.933 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS06025 d19333d2cbb1e4551c7f9998ec91e415 228 PANTHER PTHR21343 1 225 8.8E-121 T 22-04-2016 VPUCM_RS06025 d19333d2cbb1e4551c7f9998ec91e415 228 PANTHER PTHR21343:SF13 1 225 8.8E-121 T 22-04-2016 VPUCM_RS06025 d19333d2cbb1e4551c7f9998ec91e415 228 Gene3D G3DSA:3.40.50.300 4 221 4.5E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06025 d19333d2cbb1e4551c7f9998ec91e415 228 Pfam PF13500 AAA domain 4 211 1.2E-39 T 22-04-2016 VPUCM_RS06025 d19333d2cbb1e4551c7f9998ec91e415 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 6.1E-55 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS06025 d19333d2cbb1e4551c7f9998ec91e415 228 PIRSF PIRSF006755 1 226 9.8E-80 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS06025 d19333d2cbb1e4551c7f9998ec91e415 228 SUPERFAMILY SSF52540 1 215 3.35E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 Gene3D G3DSA:3.40.50.720 9 95 4.4E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 Pfam PF08245 Mur ligase middle domain 113 279 2.3E-31 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 Gene3D G3DSA:3.90.190.20 301 431 6.7E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 PANTHER PTHR23135 1 437 3.7E-152 T 22-04-2016 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 SUPERFAMILY SSF53623 98 297 5.76E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 353 9.4E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 PANTHER PTHR23135:SF2 1 437 3.7E-152 T 22-04-2016 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 SUPERFAMILY SSF51984 9 97 1.02E-17 T 22-04-2016 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 434 2.2E-133 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 Gene3D G3DSA:3.40.1190.10 97 299 1.8E-64 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.175 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VPUCM_RS02250 aed65dabaa1d0cf29388fd34e353ab4d 437 SUPERFAMILY SSF53244 299 435 3.3E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS07395 750c4cb4a67d28d0ac93fd8de048daa0 152 SUPERFAMILY SSF55729 16 139 1.15E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07395 750c4cb4a67d28d0ac93fd8de048daa0 152 Pfam PF00583 Acetyltransferase (GNAT) family 55 135 2.0E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS07395 750c4cb4a67d28d0ac93fd8de048daa0 152 PANTHER PTHR23091 1 140 5.2E-14 T 22-04-2016 VPUCM_RS07395 750c4cb4a67d28d0ac93fd8de048daa0 152 Gene3D G3DSA:3.40.630.30 1 137 7.6E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS04625 0a72eff7f25236de1b92d187bb787f37 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VPUCM_RS04625 0a72eff7f25236de1b92d187bb787f37 292 PANTHER PTHR10804 1 289 1.0E-144 T 22-04-2016 VPUCM_RS04625 0a72eff7f25236de1b92d187bb787f37 292 SUPERFAMILY SSF55920 3 282 1.7E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS04625 0a72eff7f25236de1b92d187bb787f37 292 Gene3D G3DSA:3.90.230.10 3 286 5.8E-93 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS04625 0a72eff7f25236de1b92d187bb787f37 292 Pfam PF00557 Metallopeptidase family M24 12 271 3.4E-45 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS04625 0a72eff7f25236de1b92d187bb787f37 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 3.3E-83 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VPUCM_RS04625 0a72eff7f25236de1b92d187bb787f37 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.656 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VPUCM_RS04625 0a72eff7f25236de1b92d187bb787f37 292 PANTHER PTHR10804:SF75 1 289 1.0E-144 T 22-04-2016 VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 Gene3D G3DSA:3.40.640.10 5 247 2.3E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 PANTHER PTHR11808 7 386 2.2E-177 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 1.5E-136 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 Gene3D G3DSA:3.90.1150.10 250 384 7.3E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 SUPERFAMILY SSF53383 9 381 5.27E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 PANTHER PTHR11808:SF15 7 386 2.2E-177 T 22-04-2016 VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 1.9E-201 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 VPUCM_RS14460 8b5160eedeec84ab996deb1c7dd3dc1f 386 PIRSF PIRSF001434 1 385 6.3E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 Gene3D G3DSA:3.10.20.70 3 105 1.3E-39 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 8.8E-31 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 PANTHER PTHR20852:SF15 161 469 2.0E-272 T 22-04-2016 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 PANTHER PTHR20852:SF15 1 138 2.0E-272 T 22-04-2016 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.5E-212 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 SMART SM01230 102 379 1.9E-152 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 6.1E-139 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 Gene3D G3DSA:3.30.590.10 106 455 1.1E-139 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 PANTHER PTHR20852 161 469 2.0E-272 T 22-04-2016 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 PANTHER PTHR20852 1 138 2.0E-272 T 22-04-2016 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VPUCM_RS00605 b097d272efc3934bae82ae4aace570f5 469 SUPERFAMILY SSF55931 102 468 3.92E-137 T 22-04-2016 VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 7.7E-16 T 22-04-2016 IPR005644 NolW-like VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 Pfam PF03958 Bacterial type II/III secretion system short domain 266 344 2.0E-18 T 22-04-2016 IPR005644 NolW-like VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 9.2E-9 T 22-04-2016 IPR005644 NolW-like VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 Pfam PF00263 Bacterial type II and III secretion system protein 450 612 5.1E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 621 6.5E-159 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PANTHER PTHR30332 25 639 2.4E-287 T 22-04-2016 VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 491 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 576 594 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 446 470 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 599 613 2.8E-37 T 22-04-2016 IPR001775 GspD/PilQ family VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PANTHER PTHR30332:SF3 25 639 2.4E-287 T 22-04-2016 VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR01032 Gene IV protein signature 471 494 3.2E-13 T 22-04-2016 VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR01032 Gene IV protein signature 539 567 3.2E-13 T 22-04-2016 VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR01032 Gene IV protein signature 592 614 3.2E-13 T 22-04-2016 VPUCM_RS00665 d9b90fbf598c788cd778ae0ac17e9ffd 674 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 557 590 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VPUCM_RS16060 d732107dd41fb44e867f74c1060d4dde 211 PANTHER PTHR31760 1 211 2.1E-82 T 22-04-2016 VPUCM_RS16060 d732107dd41fb44e867f74c1060d4dde 211 SUPERFAMILY SSF53335 8 209 3.38E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS16060 d732107dd41fb44e867f74c1060d4dde 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.3E-57 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VPUCM_RS16060 d732107dd41fb44e867f74c1060d4dde 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 4.4E-63 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VPUCM_RS16060 d732107dd41fb44e867f74c1060d4dde 211 PANTHER PTHR31760:SF0 1 211 2.1E-82 T 22-04-2016 VPUCM_RS16060 d732107dd41fb44e867f74c1060d4dde 211 PIRSF PIRSF003078 2 211 2.0E-58 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VPUCM_RS16060 d732107dd41fb44e867f74c1060d4dde 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.571 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VPUCM_RS16060 d732107dd41fb44e867f74c1060d4dde 211 Gene3D G3DSA:3.40.50.150 7 210 6.8E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS06395 b81c74c1a762535a531ecb11a6ea9067 255 SUPERFAMILY SSF81301 6 64 3.19E-7 T 22-04-2016 VPUCM_RS06395 b81c74c1a762535a531ecb11a6ea9067 255 Gene3D G3DSA:3.30.460.10 20 126 1.4E-11 T 22-04-2016 VPUCM_RS08905 364e1452c718fbc319aea94cb3899a46 471 SUPERFAMILY SSF56954 9 79 1.14E-67 T 22-04-2016 VPUCM_RS08905 364e1452c718fbc319aea94cb3899a46 471 SUPERFAMILY SSF56954 106 446 1.14E-67 T 22-04-2016 VPUCM_RS08905 364e1452c718fbc319aea94cb3899a46 471 Pfam PF02321 Outer membrane efflux protein 265 446 1.6E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS08905 364e1452c718fbc319aea94cb3899a46 471 Pfam PF02321 Outer membrane efflux protein 28 243 1.9E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS08905 364e1452c718fbc319aea94cb3899a46 471 PANTHER PTHR30026:SF5 1 453 8.1E-182 T 22-04-2016 VPUCM_RS08905 364e1452c718fbc319aea94cb3899a46 471 Gene3D G3DSA:1.20.1600.10 25 445 1.1E-54 T 22-04-2016 VPUCM_RS08905 364e1452c718fbc319aea94cb3899a46 471 PANTHER PTHR30026 1 453 8.1E-182 T 22-04-2016 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 2.0E-115 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 PIRSF PIRSF036979 24 333 1.2E-27 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 PANTHER PTHR11358:SF35 7 331 1.7E-132 T 22-04-2016 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.944 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 Pfam PF00491 Arginase family 46 325 2.2E-61 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 PANTHER PTHR11358 7 331 1.7E-132 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 SUPERFAMILY SSF52768 13 332 1.13E-84 T 22-04-2016 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 PRINTS PR00116 Arginase signature 125 140 1.7E-5 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 PRINTS PR00116 Arginase signature 252 281 1.7E-5 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VPUCM_RS09650 b9d42b2ff757a2c3e4fd4cbaf112bd03 340 Gene3D G3DSA:3.40.800.10 8 334 5.7E-113 T 22-04-2016 IPR023696 Ureohydrolase domain VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 Gene3D G3DSA:3.60.20.10 13 435 4.8E-170 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 2.8E-176 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 Gene3D G3DSA:3.20.20.70 815 1190 1.9E-166 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 Gene3D G3DSA:3.20.20.70 440 779 4.3E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 SUPERFAMILY SSF69336 1214 1464 1.44E-87 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 PANTHER PTHR11938:SF1 2 1477 0.0 T 22-04-2016 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 PANTHER PTHR11938 2 1477 0.0 T 22-04-2016 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 Pfam PF01493 GXGXG motif 1236 1418 7.5E-74 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 SUPERFAMILY SSF56235 13 429 6.1E-148 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 2.3E-153 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 Pfam PF04898 Glutamate synthase central domain 458 738 4.8E-102 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 Gene3D G3DSA:2.160.20.60 1213 1465 3.6E-95 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VPUCM_RS02380 b9f71a9bf854d56a45fad2870d896abe 1487 SUPERFAMILY SSF51395 434 1191 1.26E-251 T 22-04-2016 VPUCM_RS12770 036203cbb998ecf414f7d4b315b44aa6 100 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 5.2E-35 T 22-04-2016 IPR022069 Protein of unknown function DUF3622 VPUCM_RS06565 25ee2567752fd03c1289ca81b5b1dda9 360 PIRSF PIRSF028101 4 360 7.5E-168 T 22-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VPUCM_RS06565 25ee2567752fd03c1289ca81b5b1dda9 360 Gene3D G3DSA:2.130.10.10 283 307 8.6E-6 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VPUCM_RS06565 25ee2567752fd03c1289ca81b5b1dda9 360 Gene3D G3DSA:2.130.10.10 60 230 8.6E-6 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VPUCM_RS06565 25ee2567752fd03c1289ca81b5b1dda9 360 SUPERFAMILY SSF50969 61 314 7.77E-10 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VPUCM_RS06565 25ee2567752fd03c1289ca81b5b1dda9 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 2.2E-113 T 22-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VPUCM_RS00580 341f79303418dc13c12c16e1292caa99 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 3.4E-90 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 VPUCM_RS00580 341f79303418dc13c12c16e1292caa99 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.701 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VPUCM_RS00580 341f79303418dc13c12c16e1292caa99 334 PANTHER PTHR11409 2 333 2.2E-104 T 22-04-2016 VPUCM_RS00580 341f79303418dc13c12c16e1292caa99 334 Gene3D G3DSA:3.20.20.140 2 333 4.3E-98 T 22-04-2016 VPUCM_RS00580 341f79303418dc13c12c16e1292caa99 334 SUPERFAMILY SSF51556 3 325 1.33E-75 T 22-04-2016 IPR032466 Metal-dependent hydrolase VPUCM_RS00580 341f79303418dc13c12c16e1292caa99 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.6E-122 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 VPUCM_RS12255 d9678a49491b2c969e978dbcdda48ce0 193 Pfam PF01713 Smr domain 95 175 2.2E-21 T 22-04-2016 IPR002625 Smr domain VPUCM_RS12255 d9678a49491b2c969e978dbcdda48ce0 193 SUPERFAMILY SSF160443 93 175 3.27E-14 T 22-04-2016 IPR002625 Smr domain VPUCM_RS12255 d9678a49491b2c969e978dbcdda48ce0 193 PANTHER PTHR35562 3 185 2.1E-75 T 22-04-2016 VPUCM_RS12255 d9678a49491b2c969e978dbcdda48ce0 193 PANTHER PTHR35562:SF2 3 185 2.1E-75 T 22-04-2016 VPUCM_RS12255 d9678a49491b2c969e978dbcdda48ce0 193 SMART SM00463 92 175 1.6E-15 T 22-04-2016 IPR002625 Smr domain VPUCM_RS06850 eff2c7b28e357b062bf9147f950ef5ba 160 SUPERFAMILY SSF81301 1 155 6.54E-36 T 22-04-2016 VPUCM_RS10330 9dfc81d626b302b2666d90d42c3040ae 171 Pfam PF00085 Thioredoxin 52 157 8.1E-12 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 VPUCM_RS10330 9dfc81d626b302b2666d90d42c3040ae 171 Gene3D G3DSA:3.40.30.10 31 160 1.1E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS10330 9dfc81d626b302b2666d90d42c3040ae 171 PANTHER PTHR10681 11 171 5.3E-17 T 22-04-2016 VPUCM_RS10330 9dfc81d626b302b2666d90d42c3040ae 171 PANTHER PTHR10681:SF106 11 171 5.3E-17 T 22-04-2016 VPUCM_RS10330 9dfc81d626b302b2666d90d42c3040ae 171 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VPUCM_RS10330 9dfc81d626b302b2666d90d42c3040ae 171 SUPERFAMILY SSF52833 41 161 1.82E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 Gene3D G3DSA:3.40.50.620 9 213 5.4E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 PANTHER PTHR10055:SF6 1 340 1.8E-156 T 22-04-2016 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 Gene3D G3DSA:1.10.240.10 214 304 1.9E-34 T 22-04-2016 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 SUPERFAMILY SSF52374 12 337 6.49E-75 T 22-04-2016 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 1.9E-69 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 Pfam PF00579 tRNA synthetases class I (W and Y) 10 292 7.6E-54 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 PANTHER PTHR10055 1 340 1.8E-156 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.5E-21 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.5E-21 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.5E-21 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS05925 0dbc8a093d407726ab66a49fdaf86210 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.5E-21 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 Gene3D G3DSA:3.30.428.10 3 111 2.0E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 Pfam PF01230 HIT domain 12 109 2.4E-29 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PANTHER PTHR23089:SF2 2 112 7.1E-51 T 22-04-2016 VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 27 45 2.2E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 95 105 2.2E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 6 22 2.2E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PANTHER PTHR23089 2 112 7.1E-51 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VPUCM_RS05445 1f0b8cc0aedb7bf7c4e0efe24837c777 116 SUPERFAMILY SSF54197 2 112 3.56E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VPUCM_RS03270 e309a2f0dffa1ce907f4846e7e75063c 119 Pfam PF04355 SmpA / OmlA family 35 103 1.9E-25 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VPUCM_RS03270 e309a2f0dffa1ce907f4846e7e75063c 119 PANTHER PTHR37482:SF1 1 118 1.9E-47 T 22-04-2016 VPUCM_RS03270 e309a2f0dffa1ce907f4846e7e75063c 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.306 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE VPUCM_RS03270 e309a2f0dffa1ce907f4846e7e75063c 119 PANTHER PTHR37482 1 118 1.9E-47 T 22-04-2016 VPUCM_RS14545 53c8677a2022ab6f480844edf5917ba1 193 PANTHER PTHR10516 129 191 7.2E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VPUCM_RS14545 53c8677a2022ab6f480844edf5917ba1 193 PANTHER PTHR10516 1 83 7.2E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VPUCM_RS14545 53c8677a2022ab6f480844edf5917ba1 193 SUPERFAMILY SSF54534 2 138 2.16E-34 T 22-04-2016 VPUCM_RS14545 53c8677a2022ab6f480844edf5917ba1 193 PANTHER PTHR10516:SF316 129 191 7.2E-58 T 22-04-2016 VPUCM_RS14545 53c8677a2022ab6f480844edf5917ba1 193 PANTHER PTHR10516:SF316 1 83 7.2E-58 T 22-04-2016 VPUCM_RS14545 53c8677a2022ab6f480844edf5917ba1 193 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 2.3E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VPUCM_RS14545 53c8677a2022ab6f480844edf5917ba1 193 Gene3D G3DSA:3.10.50.40 2 80 3.2E-18 T 22-04-2016 VPUCM_RS14545 53c8677a2022ab6f480844edf5917ba1 193 Gene3D G3DSA:3.10.50.40 126 140 3.2E-18 T 22-04-2016 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 Pfam PF07840 FadR C-terminal domain 72 274 5.4E-70 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 SMART SM00345 12 71 1.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 PANTHER PTHR11751:SF402 13 97 5.7E-54 T 22-04-2016 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 PANTHER PTHR11751 13 97 5.7E-54 T 22-04-2016 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.354 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 Gene3D G3DSA:1.20.120.530 178 278 1.4E-67 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 Gene3D G3DSA:1.20.120.530 80 137 1.4E-67 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 SUPERFAMILY SSF48008 178 270 8.63E-57 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 SUPERFAMILY SSF48008 79 137 8.63E-57 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.0E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 Gene3D G3DSA:1.10.10.10 12 74 5.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10650 7572b098ec8e1848f08859b3e308f5b2 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 3.8E-115 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VPUCM_RS00835 f9045e604cdc1d0467a328891ef5277c 453 PIRSF PIRSF037714 2 453 2.0E-170 T 22-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein VPUCM_RS00835 f9045e604cdc1d0467a328891ef5277c 453 PANTHER PTHR30625 21 446 6.7E-83 T 22-04-2016 VPUCM_RS00835 f9045e604cdc1d0467a328891ef5277c 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.8E-28 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VPUCM_RS00835 f9045e604cdc1d0467a328891ef5277c 453 PANTHER PTHR30625:SF0 21 446 6.7E-83 T 22-04-2016 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 SUPERFAMILY SSF51905 97 261 2.32E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 SUPERFAMILY SSF51905 6 66 2.32E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.6E-294 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 SMART SM01228 546 617 2.5E-42 T 22-04-2016 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 Gene3D G3DSA:3.50.50.60 7 234 5.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 Pfam PF13932 GidA associated domain 403 616 1.1E-71 T 22-04-2016 IPR026904 GidA associated domain 3 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 Pfam PF01134 Glucose inhibited division protein A 8 399 6.1E-170 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 PANTHER PTHR11806:SF0 1 631 0.0 T 22-04-2016 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 PANTHER PTHR11806 1 631 0.0 T 22-04-2016 VPUCM_RS16065 f056626ffb1830769b322439cbd08873 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.732 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VPUCM_RS10700 2176b2dcf3ea0dbd3883c05aa0be11f4 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 1.2E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VPUCM_RS10700 2176b2dcf3ea0dbd3883c05aa0be11f4 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 3.0E-92 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 VPUCM_RS10700 2176b2dcf3ea0dbd3883c05aa0be11f4 232 PANTHER PTHR30625:SF3 3 223 1.5E-76 T 22-04-2016 VPUCM_RS10700 2176b2dcf3ea0dbd3883c05aa0be11f4 232 PANTHER PTHR30625 3 223 1.5E-76 T 22-04-2016 VPUCM_RS01405 c73ecdc733c6e9a2ace716d0b22734c9 181 Gene3D G3DSA:3.30.70.1070 103 177 4.7E-26 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS01405 c73ecdc733c6e9a2ace716d0b22734c9 181 Pfam PF05036 Sporulation related domain 107 176 3.2E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS01405 c73ecdc733c6e9a2ace716d0b22734c9 181 SUPERFAMILY SSF110997 106 177 3.4E-17 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS01405 c73ecdc733c6e9a2ace716d0b22734c9 181 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 100 178 7.5E-33 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 PANTHER PTHR30349:SF17 1 308 3.1E-154 T 22-04-2016 VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 304 35.266 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 SUPERFAMILY SSF47823 16 107 4.51E-12 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 2.2E-108 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 SUPERFAMILY SSF56349 116 302 9.42E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 PANTHER PTHR30349 1 308 3.1E-154 T 22-04-2016 VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 4.5E-20 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 Gene3D G3DSA:1.10.150.130 14 110 1.5E-21 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 Gene3D G3DSA:1.10.443.10 123 298 3.3E-51 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS15560 75afad01c1a02dbb1382eac6221a48f3 310 Pfam PF00589 Phage integrase family 122 290 1.0E-48 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS15075 d61f8146435788019fab47b3bffc1325 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 4.0E-109 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VPUCM_RS15075 d61f8146435788019fab47b3bffc1325 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 6.3E-106 T 22-04-2016 VPUCM_RS15075 d61f8146435788019fab47b3bffc1325 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 34.054 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VPUCM_RS15075 d61f8146435788019fab47b3bffc1325 295 PIRSF PIRSF000401 1 295 3.8E-101 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VPUCM_RS15075 d61f8146435788019fab47b3bffc1325 295 PANTHER PTHR18895:SF69 12 291 1.7E-157 T 22-04-2016 VPUCM_RS15075 d61f8146435788019fab47b3bffc1325 295 SUPERFAMILY SSF53335 43 274 2.22E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15075 d61f8146435788019fab47b3bffc1325 295 Gene3D G3DSA:3.40.50.150 99 287 2.6E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15075 d61f8146435788019fab47b3bffc1325 295 PANTHER PTHR18895 12 291 1.7E-157 T 22-04-2016 VPUCM_RS07915 04001940648ba0602b68cffeb47c21ec 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 3.1E-73 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VPUCM_RS07915 04001940648ba0602b68cffeb47c21ec 195 PANTHER PTHR19136 1 193 3.6E-52 T 22-04-2016 VPUCM_RS07915 04001940648ba0602b68cffeb47c21ec 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 2.4E-34 T 22-04-2016 IPR025877 MobA-like NTP transferase VPUCM_RS07915 04001940648ba0602b68cffeb47c21ec 195 SUPERFAMILY SSF53448 7 189 3.02E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS07915 04001940648ba0602b68cffeb47c21ec 195 PANTHER PTHR19136:SF81 1 193 3.6E-52 T 22-04-2016 VPUCM_RS07915 04001940648ba0602b68cffeb47c21ec 195 Gene3D G3DSA:3.90.550.10 4 192 1.3E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS07915 04001940648ba0602b68cffeb47c21ec 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.111 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 Gene3D G3DSA:1.20.272.10 207 319 1.5E-19 T 22-04-2016 VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 206 314 4.2E-20 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 198 1.9E-63 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 PANTHER PTHR11669:SF8 11 260 6.8E-53 T 22-04-2016 VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 SUPERFAMILY SSF52540 2 179 3.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 Gene3D G3DSA:3.40.50.300 2 165 5.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 SUPERFAMILY SSF48019 208 319 7.14E-14 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 PANTHER PTHR11669 11 260 6.8E-53 T 22-04-2016 VPUCM_RS10535 c8a00a4c9cbc77def6b37a32bc592d6a 320 Pfam PF13177 DNA polymerase III, delta subunit 11 164 1.4E-43 T 22-04-2016 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 Pfam PF00204 DNA gyrase B 218 384 2.1E-42 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.49E-124 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 SMART SM00387 27 173 3.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 47.007 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 Pfam PF01751 Toprim domain 413 521 8.7E-12 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF54211 217 382 2.47E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PANTHER PTHR10169 1 622 0.0 T 22-04-2016 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.30.230.10 216 390 2.7E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PANTHER PTHR10169:SF45 1 622 0.0 T 22-04-2016 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 SMART SM00433 34 622 8.9E-217 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.40.50.670 398 609 3.2E-79 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.77E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF55874 5 215 3.3E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.30.565.10 15 213 1.2E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF56719 388 619 9.15E-80 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VPUCM_RS02130 189715dca42c275023db87ab3d6f0395 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 6.6E-27 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 SUPERFAMILY SSF52540 1 344 1.39E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 2.3E-120 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.3E-37 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 Gene3D G3DSA:3.40.50.300 1 172 3.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 Gene3D G3DSA:3.40.50.300 231 351 3.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.487 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 PANTHER PTHR32182 1 357 1.3E-73 T 22-04-2016 VPUCM_RS00055 398cd26a122831a76bc212e7f5bfd8fe 359 PANTHER PTHR32182:SF0 1 357 1.3E-73 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VPUCM_RS00100 29e5144c676220cfc79e820602524b47 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 1.5E-20 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VPUCM_RS00100 29e5144c676220cfc79e820602524b47 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.4E-20 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VPUCM_RS00100 29e5144c676220cfc79e820602524b47 184 PANTHER PTHR12608 1 184 4.8E-41 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VPUCM_RS06080 3ae67c425a3ec3d5b97aa73ad881039b 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 7.0E-107 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VPUCM_RS06080 3ae67c425a3ec3d5b97aa73ad881039b 205 Gene3D G3DSA:1.10.3890.10 2 205 7.8E-88 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VPUCM_RS06080 3ae67c425a3ec3d5b97aa73ad881039b 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.6E-76 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VPUCM_RS06080 3ae67c425a3ec3d5b97aa73ad881039b 205 PANTHER PTHR38100 2 205 3.7E-95 T 22-04-2016 VPUCM_RS06080 3ae67c425a3ec3d5b97aa73ad881039b 205 PANTHER PTHR38100:SF1 2 205 3.7E-95 T 22-04-2016 VPUCM_RS06080 3ae67c425a3ec3d5b97aa73ad881039b 205 SUPERFAMILY SSF101322 2 204 6.54E-80 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VPUCM_RS06080 3ae67c425a3ec3d5b97aa73ad881039b 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.816 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 PIRSF PIRSF001492 1 510 9.5E-202 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.393 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.1450.10 79 308 2.7E-94 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.4E-80 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF64158 78 308 1.44E-80 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF53649 313 509 8.64E-76 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF53649 4 78 8.64E-76 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 PANTHER PTHR31637:SF0 4 510 6.2E-282 T 22-04-2016 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.3E-227 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.720.10 4 78 9.7E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.720.10 313 509 9.7E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 PANTHER PTHR31637 4 510 6.2E-282 T 22-04-2016 VPUCM_RS14820 03581bd37b1030b49d7bc02cef145938 510 Pfam PF01676 Metalloenzyme superfamily 5 498 8.6E-81 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 SUPERFAMILY SSF53850 90 296 3.41E-41 T 22-04-2016 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 SUPERFAMILY SSF46785 6 87 2.83E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 PANTHER PTHR30537 1 296 1.8E-102 T 22-04-2016 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.8E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 PANTHER PTHR30537:SF5 1 296 1.8E-102 T 22-04-2016 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 Gene3D G3DSA:3.40.190.10 179 263 4.3E-16 T 22-04-2016 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 Gene3D G3DSA:1.10.10.10 6 83 4.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 Gene3D G3DSA:3.40.190.10 91 178 4.5E-8 T 22-04-2016 VPUCM_RS10345 f0c2f494d8f6e82b12249af3f017ed67 298 Pfam PF03466 LysR substrate binding domain 91 295 4.8E-36 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 PANTHER PTHR12905:SF7 44 268 2.9E-99 T 22-04-2016 VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 PANTHER PTHR12905:SF7 4 28 2.9E-99 T 22-04-2016 VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 Gene3D G3DSA:3.60.21.10 5 248 1.2E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 1.3E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 SUPERFAMILY SSF56300 6 253 9.27E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 41.844 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 4.0E-27 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 PANTHER PTHR12905 4 28 2.9E-99 T 22-04-2016 VPUCM_RS02120 69306732ba596d0270630b668d8cad0f 268 PANTHER PTHR12905 44 268 2.9E-99 T 22-04-2016 VPUCM_RS12805 b5449d876a7c84697062bb6ffc8407b9 113 Gene3D G3DSA:2.60.300.12 5 99 7.4E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS12805 b5449d876a7c84697062bb6ffc8407b9 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.1E-36 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VPUCM_RS12805 b5449d876a7c84697062bb6ffc8407b9 113 SUPERFAMILY SSF89360 8 102 1.16E-29 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS12805 b5449d876a7c84697062bb6ffc8407b9 113 PANTHER PTHR10072 8 113 1.1E-45 T 22-04-2016 VPUCM_RS12805 b5449d876a7c84697062bb6ffc8407b9 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VPUCM_RS12805 b5449d876a7c84697062bb6ffc8407b9 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.7E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS12805 b5449d876a7c84697062bb6ffc8407b9 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.874 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 VPUCM_RS04910 69bc732cb94a84ad80d16bb7c045ebbf 94 PANTHER PTHR38109 2 94 8.4E-35 T 22-04-2016 VPUCM_RS04910 69bc732cb94a84ad80d16bb7c045ebbf 94 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 1.0E-36 T 22-04-2016 IPR027354 YcgL domain VPUCM_RS04910 69bc732cb94a84ad80d16bb7c045ebbf 94 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.303 T 22-04-2016 IPR027354 YcgL domain VPUCM_RS04910 69bc732cb94a84ad80d16bb7c045ebbf 94 SUPERFAMILY SSF160191 1 92 1.22E-37 T 22-04-2016 VPUCM_RS04910 69bc732cb94a84ad80d16bb7c045ebbf 94 Pfam PF05166 YcgL domain 3 74 5.2E-32 T 22-04-2016 IPR027354 YcgL domain VPUCM_RS11455 158458de1e28522ef6a72799e03c72e8 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 1.0E-16 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VPUCM_RS11455 158458de1e28522ef6a72799e03c72e8 68 PANTHER PTHR37531 1 68 6.3E-24 T 22-04-2016 VPUCM_RS11455 158458de1e28522ef6a72799e03c72e8 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 3.8E-20 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VPUCM_RS11455 158458de1e28522ef6a72799e03c72e8 68 PANTHER PTHR37531:SF1 1 68 6.3E-24 T 22-04-2016 VPUCM_RS12715 8b6e2d56a80c13dffcbefc58a0bb340e 149 PANTHER PTHR30455 2 149 3.3E-75 T 22-04-2016 VPUCM_RS12715 8b6e2d56a80c13dffcbefc58a0bb340e 149 Pfam PF03477 ATP cone domain 50 136 2.2E-17 T 22-04-2016 IPR005144 ATP-cone domain VPUCM_RS12715 8b6e2d56a80c13dffcbefc58a0bb340e 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.9E-73 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VPUCM_RS12715 8b6e2d56a80c13dffcbefc58a0bb340e 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.329 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VPUCM_RS12715 8b6e2d56a80c13dffcbefc58a0bb340e 149 PANTHER PTHR30455:SF2 2 149 3.3E-75 T 22-04-2016 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 5.2E-56 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 5.0E-46 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PANTHER PTHR11405 1 277 5.3E-206 T 22-04-2016 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PANTHER PTHR11405 297 333 5.3E-206 T 22-04-2016 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 Gene3D G3DSA:3.40.50.1370 144 319 1.9E-74 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 3.1E-132 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 SUPERFAMILY SSF53671 4 333 8.64E-99 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 Gene3D G3DSA:3.40.50.1370 5 143 1.4E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PANTHER PTHR11405:SF44 1 277 5.3E-206 T 22-04-2016 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 PANTHER PTHR11405:SF44 297 333 5.3E-206 T 22-04-2016 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VPUCM_RS13890 b12d1469ea33dff2b1133f913a0a0482 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.4 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 Gene3D G3DSA:3.40.50.720 1 201 4.1E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 SUPERFAMILY SSF51735 31 209 1.82E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 Gene3D G3DSA:1.10.1040.10 332 484 2.6E-14 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.5E-16 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.7E-26 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.7E-125 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 SUPERFAMILY SSF48179 210 341 5.95E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 PANTHER PTHR21371 1 492 7.4E-203 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 488 36.888 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 SUPERFAMILY SSF48179 348 487 3.4E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VPUCM_RS00190 9b94c6fb4ff608363c0a56086d6238a0 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.3E-59 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 SUPERFAMILY SSF46785 16 111 3.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 Pfam PF07729 FCD domain 92 217 2.2E-26 T 22-04-2016 IPR011711 GntR, C-terminal VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 SMART SM00345 24 82 1.1E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 SUPERFAMILY SSF48008 89 224 1.8E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 5.0E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 PANTHER PTHR11751 20 108 3.9E-53 T 22-04-2016 VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 7.6E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 7.6E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 Gene3D G3DSA:1.10.10.10 12 83 2.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 PANTHER PTHR11751:SF426 20 108 3.9E-53 T 22-04-2016 VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 Gene3D G3DSA:1.20.120.530 86 227 7.4E-31 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VPUCM_RS08590 eb4dc4056fc54c3408252e23e3f9c719 237 SMART SM00895 92 219 7.0E-24 T 22-04-2016 IPR011711 GntR, C-terminal VPUCM_RS09505 5620dab44875ca2013e3066974c54a06 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.527 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VPUCM_RS09505 5620dab44875ca2013e3066974c54a06 347 Gene3D G3DSA:3.40.50.10210 66 328 5.7E-105 T 22-04-2016 VPUCM_RS09505 5620dab44875ca2013e3066974c54a06 347 PANTHER PTHR21712 1 347 7.9E-114 T 22-04-2016 VPUCM_RS09505 5620dab44875ca2013e3066974c54a06 347 Pfam PF02277 Phosphoribosyltransferase 2 345 5.4E-126 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VPUCM_RS09505 5620dab44875ca2013e3066974c54a06 347 PANTHER PTHR21712:SF4 1 347 7.9E-114 T 22-04-2016 VPUCM_RS09505 5620dab44875ca2013e3066974c54a06 347 Gene3D G3DSA:1.10.1610.10 2 65 5.6E-28 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VPUCM_RS09505 5620dab44875ca2013e3066974c54a06 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 345 2.2E-128 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VPUCM_RS09505 5620dab44875ca2013e3066974c54a06 347 SUPERFAMILY SSF52733 2 346 6.15E-111 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 Pfam PF00158 Sigma-54 interaction domain 142 308 1.7E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 Gene3D G3DSA:1.10.10.60 399 443 8.7E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 SUPERFAMILY SSF46689 354 444 8.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.2E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 PANTHER PTHR32071 28 444 1.1E-135 T 22-04-2016 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 Gene3D G3DSA:3.40.50.300 139 314 5.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 SMART SM00382 162 305 2.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 SUPERFAMILY SSF52172 37 185 3.32E-10 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 Gene3D G3DSA:3.40.50.2300 12 126 6.2E-4 T 22-04-2016 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.5E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.5E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 Gene3D G3DSA:1.10.8.60 315 382 2.0E-18 T 22-04-2016 VPUCM_RS00420 db5773acce0ff9a22644653899b3a46e 447 SUPERFAMILY SSF52540 142 379 1.16E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 Pfam PF13432 Tetratricopeptide repeat 101 172 8.4E-6 T 22-04-2016 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 Pfam PF13432 Tetratricopeptide repeat 428 482 1.7E-5 T 22-04-2016 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 PANTHER PTHR23083 302 374 2.7E-30 T 22-04-2016 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 PANTHER PTHR23083 390 465 2.7E-30 T 22-04-2016 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 PANTHER PTHR23083 59 128 2.7E-30 T 22-04-2016 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 PANTHER PTHR23083 839 862 2.7E-30 T 22-04-2016 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 PANTHER PTHR23083 144 174 2.7E-30 T 22-04-2016 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 Pfam PF14559 Tetratricopeptide repeat 316 382 9.6E-6 T 22-04-2016 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 Pfam PF13181 Tetratricopeptide repeat 390 419 0.13 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 PRINTS PR01441 Cellulose synthase subunit C signature 532 552 2.0E-10 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 PRINTS PR01441 Cellulose synthase subunit C signature 1119 1143 2.0E-10 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 PRINTS PR01441 Cellulose synthase subunit C signature 244 266 2.0E-10 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 Gene3D G3DSA:1.25.40.10 92 168 4.3E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 SUPERFAMILY SSF48452 84 177 3.03E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 SUPERFAMILY SSF48452 274 475 3.03E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 Gene3D G3DSA:1.25.40.10 305 378 3.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 Gene3D G3DSA:1.25.40.10 386 478 1.4E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 SMART SM00028 306 339 170.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 SMART SM00028 388 421 0.24 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 SMART SM00028 422 455 2.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 SMART SM00028 340 373 4.7E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 SMART SM00028 95 128 2.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11985 f3f80241200c36a3e7c012167a189dfd 1254 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 921 1235 1.4E-93 T 22-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 SUPERFAMILY SSF46929 158 203 8.89E-13 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 SUPERFAMILY SSF47781 66 136 2.06E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 4.1E-65 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 SUPERFAMILY SSF50249 2 63 4.17E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 Pfam PF01330 RuvA N terminal domain 2 62 6.7E-21 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 PANTHER PTHR33796 2 204 1.9E-83 T 22-04-2016 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 SMART SM00278 108 127 0.071 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 SMART SM00278 73 92 540.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 6.4E-14 T 22-04-2016 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 Gene3D G3DSA:1.10.150.20 67 141 4.2E-29 T 22-04-2016 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.745 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 Gene3D G3DSA:1.10.8.10 157 204 3.7E-25 T 22-04-2016 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 Pfam PF07499 RuvA, C-terminal domain 160 203 2.1E-17 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VPUCM_RS10735 5b3b61e6a5e77b6bcf96a7ea429b9a6c 204 Gene3D G3DSA:2.40.50.140 2 65 3.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS03765 479f0768de6a4ad750bb0de82f60edc1 355 Pfam PF04245 37-kD nucleoid-associated bacterial protein 14 351 3.6E-16 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VPUCM_RS08740 57883aead612ab330f0ea532ad450247 208 SUPERFAMILY SSF52218 50 184 3.73E-18 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS08740 57883aead612ab330f0ea532ad450247 208 Pfam PF12682 Flavodoxin 52 153 8.6E-9 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VPUCM_RS08740 57883aead612ab330f0ea532ad450247 208 Gene3D G3DSA:3.40.50.360 49 180 8.3E-14 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS13255 d28c37bdf883460d6f65223cd48fae4d 158 Pfam PF02542 YgbB family 2 155 2.1E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS13255 d28c37bdf883460d6f65223cd48fae4d 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.984 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS13255 d28c37bdf883460d6f65223cd48fae4d 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS13255 d28c37bdf883460d6f65223cd48fae4d 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.6E-68 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS13255 d28c37bdf883460d6f65223cd48fae4d 158 PANTHER PTHR32125 1 155 2.3E-57 T 22-04-2016 VPUCM_RS13255 d28c37bdf883460d6f65223cd48fae4d 158 SUPERFAMILY SSF69765 1 157 1.07E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS13255 d28c37bdf883460d6f65223cd48fae4d 158 Gene3D G3DSA:3.30.1330.50 1 157 8.7E-72 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS08805 657c618e741f2a20b1fa444466dd11d6 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 3.5E-25 T 22-04-2016 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 VPUCM_RS08805 657c618e741f2a20b1fa444466dd11d6 82 SUPERFAMILY SSF140129 2 78 2.35E-23 T 22-04-2016 VPUCM_RS08805 657c618e741f2a20b1fa444466dd11d6 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 3.0E-22 T 22-04-2016 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 SUPERFAMILY SSF46894 123 222 9.07E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 Gene3D G3DSA:3.40.50.2300 2 121 1.9E-38 T 22-04-2016 VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 3.1E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 SMART SM00862 147 221 3.2E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 SUPERFAMILY SSF52172 1 125 7.26E-39 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 SMART SM00448 2 113 4.8E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 PANTHER PTHR26402 2 223 1.3E-67 T 22-04-2016 VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 Gene3D G3DSA:1.10.10.10 126 222 3.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06240 56b9dda81d95a49755e063cab8314e42 225 PANTHER PTHR26402:SF552 2 223 1.3E-67 T 22-04-2016 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 Pfam PF01225 Mur ligase family, catalytic domain 26 102 3.1E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 SUPERFAMILY SSF53623 109 336 4.45E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.768 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 489 2.5E-169 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 PANTHER PTHR23135 12 489 1.7E-189 T 22-04-2016 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 Gene3D G3DSA:3.40.1390.10 18 106 5.7E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 SUPERFAMILY SSF53244 338 489 1.44E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 SUPERFAMILY SSF63418 11 105 2.75E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 Pfam PF08245 Mur ligase middle domain 115 316 7.3E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 Gene3D G3DSA:3.90.190.20 341 483 3.4E-53 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 PANTHER PTHR23135:SF4 12 489 1.7E-189 T 22-04-2016 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 420 1.7E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS02235 6211304d7bdced37d2b01aa5b3567e17 493 Gene3D G3DSA:3.40.1190.10 109 340 2.2E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS17305 a11cb5b74c43c356c956dd9e22f63778 78 PANTHER PTHR22572 1 78 1.1E-45 T 22-04-2016 VPUCM_RS17305 a11cb5b74c43c356c956dd9e22f63778 78 PANTHER PTHR22572:SF105 1 78 1.1E-45 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 VPUCM_RS17305 a11cb5b74c43c356c956dd9e22f63778 78 SUPERFAMILY SSF53448 1 77 1.8E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS17305 a11cb5b74c43c356c956dd9e22f63778 78 Gene3D G3DSA:3.90.550.10 1 77 2.0E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS17305 a11cb5b74c43c356c956dd9e22f63778 78 Pfam PF00483 Nucleotidyl transferase 1 77 7.6E-18 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 Gene3D G3DSA:3.90.550.10 440 674 4.8E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 Gene3D G3DSA:3.90.550.10 180 393 4.7E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 PANTHER PTHR22916 179 413 3.8E-40 T 22-04-2016 VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 SUPERFAMILY SSF53448 601 681 4.85E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 SUPERFAMILY SSF53448 438 561 4.85E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 SUPERFAMILY SSF53448 180 395 1.77E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 Pfam PF00535 Glycosyl transferase family 2 183 340 7.1E-25 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 Gene3D G3DSA:3.40.50.2000 877 1071 2.2E-16 T 22-04-2016 VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 Pfam PF16994 Glycosyl-transferase family 4 718 853 3.1E-9 T 22-04-2016 VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 Pfam PF00534 Glycosyl transferases group 1 902 1072 1.8E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 SUPERFAMILY SSF53756 716 1091 8.48E-52 T 22-04-2016 VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 Pfam PF13641 Glycosyltransferase like family 2 440 661 2.5E-19 T 22-04-2016 VPUCM_RS01285 4a4a8989f37155ab40b165f6203e0371 1096 PANTHER PTHR22916:SF3 179 413 3.8E-40 T 22-04-2016 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 Gene3D G3DSA:3.10.290.10 1 63 2.1E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 SUPERFAMILY SSF55174 1 85 1.05E-14 T 22-04-2016 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 2.8E-48 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 PANTHER PTHR21600:SF19 1 233 6.1E-71 T 22-04-2016 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 SMART SM00363 1 59 2.7E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 2.1E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 Pfam PF01479 S4 domain 1 46 1.0E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 PANTHER PTHR21600 1 233 6.1E-71 T 22-04-2016 VPUCM_RS09945 27854c910f3f0f850c81ee806f1da274 233 SUPERFAMILY SSF55120 60 228 2.88E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS12590 ecae929caeee3b99e347b3771861676a 258 PIRSF PIRSF029037 1 258 2.6E-116 T 22-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VPUCM_RS12590 ecae929caeee3b99e347b3771861676a 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 1.6E-115 T 22-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VPUCM_RS06835 f9b9ef6043e2d1f139295afabc252156 169 Gene3D G3DSA:1.25.40.10 86 166 2.1E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS06835 f9b9ef6043e2d1f139295afabc252156 169 SUPERFAMILY SSF48452 81 151 2.78E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS08570 0d1848741337cad06b3d342f4b95cdca 395 SUPERFAMILY SSF54506 188 393 1.43E-75 T 22-04-2016 VPUCM_RS08570 0d1848741337cad06b3d342f4b95cdca 395 PANTHER PTHR30349:SF21 1 252 2.7E-125 T 22-04-2016 VPUCM_RS08570 0d1848741337cad06b3d342f4b95cdca 395 SUPERFAMILY SSF54506 6 184 5.89E-71 T 22-04-2016 VPUCM_RS08570 0d1848741337cad06b3d342f4b95cdca 395 Pfam PF04303 PrpF protein 8 390 5.1E-175 T 22-04-2016 IPR007400 PrpF protein VPUCM_RS08570 0d1848741337cad06b3d342f4b95cdca 395 Gene3D G3DSA:3.10.310.10 6 195 6.6E-90 T 22-04-2016 VPUCM_RS08570 0d1848741337cad06b3d342f4b95cdca 395 PANTHER PTHR30349 1 252 2.7E-125 T 22-04-2016 VPUCM_RS08570 0d1848741337cad06b3d342f4b95cdca 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 7 394 2.6E-235 T 22-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 VPUCM_RS08570 0d1848741337cad06b3d342f4b95cdca 395 Gene3D G3DSA:3.10.310.10 196 373 5.4E-80 T 22-04-2016 VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 PANTHER PTHR30081 3 314 5.3E-92 T 22-04-2016 VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.889 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 Pfam PF02355 Protein export membrane protein 111 292 4.1E-71 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 SUPERFAMILY SSF82866 74 293 2.22E-41 T 22-04-2016 VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 3.1E-56 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 Gene3D G3DSA:1.20.1640.10 130 294 1.4E-26 T 22-04-2016 VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 Pfam PF07549 SecD/SecF GG Motif 35 60 1.3E-10 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VPUCM_RS02925 b529e9240565ccf23b3edc724e246146 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 2.9E-86 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 Gene3D G3DSA:3.20.20.450 81 186 1.1E-13 T 22-04-2016 IPR001633 EAL domain VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 Gene3D G3DSA:1.10.3150.10 187 355 1.3E-31 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 PANTHER PTHR33525:SF4 3 373 7.5E-139 T 22-04-2016 VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 SUPERFAMILY SSF141868 4 197 6.02E-28 T 22-04-2016 IPR001633 EAL domain VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 SMART SM00052 2 199 4.3E-4 T 22-04-2016 IPR001633 EAL domain VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 Pfam PF00563 EAL domain 67 194 4.9E-14 T 22-04-2016 IPR001633 EAL domain VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 SUPERFAMILY SSF109604 185 404 5.65E-41 T 22-04-2016 VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 Pfam PF08668 HDOD domain 208 324 5.5E-13 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 PANTHER PTHR33525 3 373 7.5E-139 T 22-04-2016 VPUCM_RS15515 5d783dea095709df5f29df11b74ae32f 407 PIRSF PIRSF003180 1 407 1.5E-174 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 PANTHER PTHR35894:SF2 2 532 1.2E-175 T 22-04-2016 VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 Gene3D G3DSA:3.40.50.300 27 183 1.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 SUPERFAMILY SSF47090 453 527 3.92E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 PANTHER PTHR35894 2 532 1.2E-175 T 22-04-2016 VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 SUPERFAMILY SSF52540 6 264 1.33E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 Gene3D G3DSA:1.10.101.10 455 526 1.6E-13 T 22-04-2016 IPR002477 Peptidoglycan binding-like VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 Pfam PF13401 AAA domain 42 171 5.6E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 SMART SM00382 42 195 1.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS02055 11daa07339dee5425409d2a509f5459f 539 Pfam PF01471 Putative peptidoglycan binding domain 465 520 2.6E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like VPUCM_RS06715 670e22f9898ae47eceb86c09d2f94d0b 179 SUPERFAMILY SSF111126 1 176 4.97E-51 T 22-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain VPUCM_RS06715 670e22f9898ae47eceb86c09d2f94d0b 179 Gene3D G3DSA:3.90.1520.10 1 177 1.8E-57 T 22-04-2016 VPUCM_RS06715 670e22f9898ae47eceb86c09d2f94d0b 179 Pfam PF07700 Haem-NO-binding 2 162 6.3E-39 T 22-04-2016 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2 VPUCM_RS10885 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS10885 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10885 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 71 3.9E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10885 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VPUCM_RS10885 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.5E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VPUCM_RS10885 dcb4525c3e58b45274dc0b85d99859d5 72 PANTHER PTHR33370 1 72 2.5E-50 T 22-04-2016 VPUCM_RS10885 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VPUCM_RS06445 2f8f22a9631fff28190cb678a94ee122 417 PANTHER PTHR12286 3 409 4.4E-152 T 22-04-2016 VPUCM_RS06445 2f8f22a9631fff28190cb678a94ee122 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 1.5E-31 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VPUCM_RS06445 2f8f22a9631fff28190cb678a94ee122 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 395 4.3E-30 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal VPUCM_RS06445 2f8f22a9631fff28190cb678a94ee122 417 Gene3D G3DSA:3.40.50.720 2 196 1.6E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS06445 2f8f22a9631fff28190cb678a94ee122 417 SUPERFAMILY SSF51735 3 179 7.15E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS06445 2f8f22a9631fff28190cb678a94ee122 417 PANTHER PTHR12286:SF6 3 409 4.4E-152 T 22-04-2016 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 SUPERFAMILY SSF53383 1 395 6.59E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PANTHER PTHR11879:SF11 1 395 1.6E-262 T 22-04-2016 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 Gene3D G3DSA:3.40.640.10 45 315 6.9E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 Pfam PF00155 Aminotransferase class I and II 27 391 8.9E-83 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VPUCM_RS06650 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PANTHER PTHR11879 1 395 1.6E-262 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 2.3E-161 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 PANTHER PTHR23293 6 160 1.1E-92 T 22-04-2016 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 PANTHER PTHR23293 180 213 1.1E-92 T 22-04-2016 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 PANTHER PTHR23293 247 304 1.1E-92 T 22-04-2016 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 Gene3D G3DSA:3.40.50.620 7 212 1.7E-61 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 Gene3D G3DSA:3.40.50.620 246 255 1.7E-61 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 PANTHER PTHR23293:SF6 6 160 1.1E-92 T 22-04-2016 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 PANTHER PTHR23293:SF6 180 213 1.1E-92 T 22-04-2016 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 PANTHER PTHR23293:SF6 247 304 1.1E-92 T 22-04-2016 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 5.4E-62 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 57.269 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 PIRSF PIRSF002936 2 304 5.4E-158 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VPUCM_RS01130 f98d4847c373041e667406e9cd63dbd1 304 SUPERFAMILY SSF52402 8 211 1.84E-73 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.1E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 Gene3D G3DSA:3.50.50.60 234 406 7.8E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.7E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 SUPERFAMILY SSF46548 2 155 2.04E-36 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 4.1E-198 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 Gene3D G3DSA:3.40.50.720 148 233 6.7E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 Gene3D G3DSA:3.40.50.720 407 481 6.7E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 PANTHER PTHR11938 43 319 3.0E-149 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 PANTHER PTHR11938 335 473 3.0E-149 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 Gene3D G3DSA:1.10.1060.10 3 147 5.1E-39 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 PANTHER PTHR11938:SF75 43 319 3.0E-149 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 PANTHER PTHR11938:SF75 335 473 3.0E-149 T 22-04-2016 VPUCM_RS02385 424c634bf7058266d337fcf342423cb8 489 SUPERFAMILY SSF51971 143 407 7.06E-67 T 22-04-2016 VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 Gene3D G3DSA:3.40.50.360 1 168 2.2E-59 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 Pfam PF00258 Flavodoxin 5 160 1.5E-28 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 SUPERFAMILY SSF52218 1 167 1.06E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 PIRSF PIRSF038996 1 171 5.1E-59 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 PANTHER PTHR19384 1 119 2.2E-79 T 22-04-2016 VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 PANTHER PTHR19384 141 167 2.2E-79 T 22-04-2016 VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.2E-69 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 PANTHER PTHR19384:SF73 1 119 2.2E-79 T 22-04-2016 VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 PANTHER PTHR19384:SF73 141 167 2.2E-79 T 22-04-2016 VPUCM_RS02500 30d6817c3fed3b5b0030b1121d0e21b8 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VPUCM_RS02490 ffeda85fce01c3ecc52d2d1312d0041a 239 SUPERFAMILY SSF53335 35 190 9.11E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS02490 ffeda85fce01c3ecc52d2d1312d0041a 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VPUCM_RS02490 ffeda85fce01c3ecc52d2d1312d0041a 239 Pfam PF05175 Methyltransferase small domain 42 129 2.1E-16 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VPUCM_RS02490 ffeda85fce01c3ecc52d2d1312d0041a 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.316 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 VPUCM_RS02490 ffeda85fce01c3ecc52d2d1312d0041a 239 PANTHER PTHR18895:SF73 32 229 4.9E-68 T 22-04-2016 VPUCM_RS02490 ffeda85fce01c3ecc52d2d1312d0041a 239 Gene3D G3DSA:3.40.50.150 30 229 2.3E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS02490 ffeda85fce01c3ecc52d2d1312d0041a 239 PANTHER PTHR18895 32 229 4.9E-68 T 22-04-2016 VPUCM_RS01275 94911f24d1684a61309b6b788c263188 249 Pfam PF02348 Cytidylyltransferase 5 218 1.5E-44 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS01275 94911f24d1684a61309b6b788c263188 249 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 246 35.61 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS01275 94911f24d1684a61309b6b788c263188 249 PANTHER PTHR21485:SF4 5 246 1.6E-77 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS01275 94911f24d1684a61309b6b788c263188 249 PANTHER PTHR21485 5 246 1.6E-77 T 22-04-2016 VPUCM_RS01275 94911f24d1684a61309b6b788c263188 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 3 239 5.8E-63 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS01275 94911f24d1684a61309b6b788c263188 249 Gene3D G3DSA:3.90.550.10 3 246 7.8E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01275 94911f24d1684a61309b6b788c263188 249 SUPERFAMILY SSF53448 2 246 1.46E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 PANTHER PTHR33406:SF2 120 770 1.3E-57 T 22-04-2016 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 PANTHER PTHR33406:SF2 1 103 1.3E-57 T 22-04-2016 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 PANTHER PTHR33406 120 770 1.3E-57 T 22-04-2016 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 PANTHER PTHR33406 1 103 1.3E-57 T 22-04-2016 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 Gene3D G3DSA:1.20.1640.10 183 383 1.8E-32 T 22-04-2016 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 Gene3D G3DSA:1.20.1640.10 573 775 4.5E-33 T 22-04-2016 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 SUPERFAMILY SSF82866 159 382 9.29E-31 T 22-04-2016 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 SUPERFAMILY SSF82866 598 768 1.57E-33 T 22-04-2016 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 Pfam PF03176 MMPL family 585 769 3.7E-16 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VPUCM_RS09590 c041ad4f25b07171a69de979b765d449 792 Pfam PF03176 MMPL family 62 382 6.6E-23 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VPUCM_RS02685 cf3d46660b00b9ce8a783680bc3099a8 333 Gene3D G3DSA:2.70.70.10 148 274 8.1E-45 T 22-04-2016 VPUCM_RS02685 cf3d46660b00b9ce8a783680bc3099a8 333 SUPERFAMILY SSF51261 77 272 7.98E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif VPUCM_RS02685 cf3d46660b00b9ce8a783680bc3099a8 333 PANTHER PTHR21666 112 283 1.6E-39 T 22-04-2016 VPUCM_RS02685 cf3d46660b00b9ce8a783680bc3099a8 333 Pfam PF01551 Peptidase family M23 174 269 3.4E-29 T 22-04-2016 IPR016047 Peptidase M23 VPUCM_RS05435 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:3.40.1350.10 241 382 3.1E-59 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VPUCM_RS05435 867396251366f03a7121fe87122e28d1 386 SUPERFAMILY SSF52980 1 382 2.86E-120 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS05435 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:1.10.10.680 163 240 6.1E-53 T 22-04-2016 VPUCM_RS05435 867396251366f03a7121fe87122e28d1 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.4E-163 T 22-04-2016 IPR015093 Protein of unknown function DUF1887 VPUCM_RS05435 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:3.40.50.10770 1 140 3.8E-62 T 22-04-2016 VPUCM_RS05940 a7b7232257f3388e90c98f3d35f1ebbd 256 SUPERFAMILY SSF47240 11 61 1.44E-74 T 22-04-2016 IPR009078 Ferritin-like superfamily VPUCM_RS05940 a7b7232257f3388e90c98f3d35f1ebbd 256 SUPERFAMILY SSF47240 109 255 1.44E-74 T 22-04-2016 IPR009078 Ferritin-like superfamily VPUCM_RS05940 a7b7232257f3388e90c98f3d35f1ebbd 256 PANTHER PTHR42637:SF1 1 256 1.4E-106 T 22-04-2016 VPUCM_RS05940 a7b7232257f3388e90c98f3d35f1ebbd 256 PANTHER PTHR42637 1 256 1.4E-106 T 22-04-2016 VPUCM_RS05940 a7b7232257f3388e90c98f3d35f1ebbd 256 PIRSF PIRSF020736 2 256 7.1E-93 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VPUCM_RS05940 a7b7232257f3388e90c98f3d35f1ebbd 256 Gene3D G3DSA:1.20.1260.10 8 61 1.2E-89 T 22-04-2016 IPR012347 Ferritin-related VPUCM_RS05940 a7b7232257f3388e90c98f3d35f1ebbd 256 Gene3D G3DSA:1.20.1260.10 109 255 1.2E-89 T 22-04-2016 IPR012347 Ferritin-related VPUCM_RS05940 a7b7232257f3388e90c98f3d35f1ebbd 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 4.9E-121 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VPUCM_RS03195 3924744742e534ca25c9e59c1a7383c0 510 PANTHER PTHR23088:SF12 209 508 1.4E-125 T 22-04-2016 VPUCM_RS03195 3924744742e534ca25c9e59c1a7383c0 510 PANTHER PTHR23088 209 508 1.4E-125 T 22-04-2016 VPUCM_RS03195 3924744742e534ca25c9e59c1a7383c0 510 SUPERFAMILY SSF56317 222 491 2.88E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS03195 3924744742e534ca25c9e59c1a7383c0 510 Gene3D G3DSA:3.40.630.30 9 191 1.1E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS03195 3924744742e534ca25c9e59c1a7383c0 510 Pfam PF00795 Carbon-nitrogen hydrolase 225 484 7.8E-35 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS03195 3924744742e534ca25c9e59c1a7383c0 510 Gene3D G3DSA:3.60.110.10 220 505 6.6E-61 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VPUCM_RS03195 3924744742e534ca25c9e59c1a7383c0 510 SUPERFAMILY SSF55729 5 140 6.35E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS03195 3924744742e534ca25c9e59c1a7383c0 510 Pfam PF00583 Acetyltransferase (GNAT) family 56 145 1.2E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS14535 8ebdc2a8c02a61a877d396676fb814b2 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.684 T 22-04-2016 IPR007236 SlyX VPUCM_RS14535 8ebdc2a8c02a61a877d396676fb814b2 75 PANTHER PTHR36508 4 75 5.8E-25 T 22-04-2016 VPUCM_RS14535 8ebdc2a8c02a61a877d396676fb814b2 75 Pfam PF04102 SlyX 9 75 1.8E-24 T 22-04-2016 IPR007236 SlyX VPUCM_RS14535 8ebdc2a8c02a61a877d396676fb814b2 75 Gene3D G3DSA:1.20.5.300 7 55 7.5E-23 T 22-04-2016 VPUCM_RS02745 e911fe8f865c448a57281f1fc2ce2faa 242 PANTHER PTHR30616 1 242 5.1E-126 T 22-04-2016 VPUCM_RS02745 e911fe8f865c448a57281f1fc2ce2faa 242 PANTHER PTHR30616:SF3 1 242 5.1E-126 T 22-04-2016 VPUCM_RS02745 e911fe8f865c448a57281f1fc2ce2faa 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 1.1E-69 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VPUCM_RS02745 e911fe8f865c448a57281f1fc2ce2faa 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 26 240 1.6E-59 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VPUCM_RS02745 e911fe8f865c448a57281f1fc2ce2faa 242 Gene3D G3DSA:3.60.140.10 3 241 4.5E-91 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VPUCM_RS02745 e911fe8f865c448a57281f1fc2ce2faa 242 SUPERFAMILY SSF64438 4 241 2.93E-83 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic VPUCM_RS09200 2b7f5bf194fc827f26580c279a9c8b36 360 PANTHER PTHR31377:SF0 1 360 4.6E-154 T 22-04-2016 VPUCM_RS09200 2b7f5bf194fc827f26580c279a9c8b36 360 Gene3D G3DSA:3.75.10.10 3 360 4.8E-140 T 22-04-2016 VPUCM_RS09200 2b7f5bf194fc827f26580c279a9c8b36 360 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 360 2.1E-171 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VPUCM_RS09200 2b7f5bf194fc827f26580c279a9c8b36 360 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 2.0E-117 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VPUCM_RS09200 2b7f5bf194fc827f26580c279a9c8b36 360 PANTHER PTHR31377 1 360 4.6E-154 T 22-04-2016 VPUCM_RS09200 2b7f5bf194fc827f26580c279a9c8b36 360 SUPERFAMILY SSF55909 3 360 6.07E-136 T 22-04-2016 VPUCM_RS09200 2b7f5bf194fc827f26580c279a9c8b36 360 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.794 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 Gene3D G3DSA:3.30.1330.60 62 173 2.5E-34 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 PANTHER PTHR30128 42 174 6.2E-56 T 22-04-2016 VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 Pfam PF00691 OmpA family 73 168 5.3E-23 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 74 96 9.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 104 119 9.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 119 135 9.4E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 SUPERFAMILY SSF103088 57 173 9.03E-34 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 PANTHER PTHR30128:SF18 42 174 6.2E-56 T 22-04-2016 VPUCM_RS10680 5e5d49f6725900b73d817a85124eb5b9 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 174 2.5E-44 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 PANTHER PTHR15184:SF34 54 141 4.9E-200 T 22-04-2016 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 PANTHER PTHR15184:SF34 160 418 4.9E-200 T 22-04-2016 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00357 52 118 1.7E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:3.40.50.300 132 418 5.7E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.3E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00959 5 47 6.9E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00382 170 355 6.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.0E-220 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 PANTHER PTHR15184 54 141 4.9E-200 T 22-04-2016 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 PANTHER PTHR15184 160 418 4.9E-200 T 22-04-2016 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.642 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.1E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:1.10.720.10 1 47 1.2E-21 T 22-04-2016 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:2.40.50.140 49 117 4.2E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.4E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF52540 90 371 2.93E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15650 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 Gene3D G3DSA:3.40.50.720 2 273 1.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 SUPERFAMILY SSF51735 1 271 1.75E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PANTHER PTHR24322 146 178 4.6E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PANTHER PTHR24322 7 130 4.6E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PANTHER PTHR24322:SF463 146 178 4.6E-61 T 22-04-2016 VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 PANTHER PTHR24322:SF463 7 130 4.6E-61 T 22-04-2016 VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VPUCM_RS11975 a6aab8192032ade9581dacf15ab3a008 275 Pfam PF00106 short chain dehydrogenase 3 187 3.4E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 PANTHER PTHR37031:SF2 317 611 4.2E-96 T 22-04-2016 VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 Gene3D G3DSA:3.60.21.10 291 363 1.2E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 Gene3D G3DSA:3.60.21.10 413 443 1.2E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 Gene3D G3DSA:3.60.21.10 137 175 1.2E-5 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 PANTHER PTHR37031 317 611 4.2E-96 T 22-04-2016 VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 Pfam PF09423 PhoD-like phosphatase 318 585 1.7E-6 T 22-04-2016 IPR018946 Alkaline phosphatase D-related VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 PANTHER PTHR37031:SF2 130 234 4.2E-96 T 22-04-2016 VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 SUPERFAMILY SSF56300 411 538 3.51E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 SUPERFAMILY SSF56300 152 193 3.51E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 SUPERFAMILY SSF56300 321 340 3.51E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS07820 d5fdacc49f560daeb5596c76b0c752fd 649 PANTHER PTHR37031 130 234 4.2E-96 T 22-04-2016 VPUCM_RS04825 4db0df5d0e9eac2bdf71233d0efc5e29 75 SMART SM00899 1 74 5.6E-24 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VPUCM_RS04825 4db0df5d0e9eac2bdf71233d0efc5e29 75 Pfam PF04023 FeoA domain 1 74 2.5E-19 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VPUCM_RS04825 4db0df5d0e9eac2bdf71233d0efc5e29 75 PANTHER PTHR33238 1 75 1.9E-23 T 22-04-2016 VPUCM_RS04825 4db0df5d0e9eac2bdf71233d0efc5e29 75 SUPERFAMILY SSF50037 4 74 2.52E-19 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal VPUCM_RS09475 f27460666716c7a6f50d6149fde9fc41 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.439 T 22-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VPUCM_RS09475 f27460666716c7a6f50d6149fde9fc41 331 PANTHER PTHR30472:SF29 1 331 1.3E-158 T 22-04-2016 VPUCM_RS09475 f27460666716c7a6f50d6149fde9fc41 331 SUPERFAMILY SSF81345 7 326 3.01E-79 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VPUCM_RS09475 f27460666716c7a6f50d6149fde9fc41 331 Pfam PF01032 FecCD transport family 25 326 3.3E-80 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VPUCM_RS09475 f27460666716c7a6f50d6149fde9fc41 331 Gene3D G3DSA:1.10.3470.10 10 327 2.0E-92 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VPUCM_RS09475 f27460666716c7a6f50d6149fde9fc41 331 PANTHER PTHR30472 1 331 1.3E-158 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 SMART SM00382 73 364 3.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 Pfam PF00270 DEAD/DEAH box helicase 68 214 3.5E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 Pfam PF00271 Helicase conserved C-terminal domain 270 383 1.5E-10 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 SMART SM00490 284 384 3.1E-15 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 Pfam PF04408 Helicase associated domain (HA2) 446 537 1.5E-17 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 PANTHER PTHR18934 43 682 0.0 T 22-04-2016 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 PANTHER PTHR18934 719 847 0.0 T 22-04-2016 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 558 678 4.2E-18 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 1276 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 SUPERFAMILY SSF52540 55 547 5.36E-116 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 SMART SM00847 444 539 1.4E-36 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 SMART SM00487 56 240 2.3E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 Pfam PF11898 Domain of unknown function (DUF3418) 692 1276 1.4E-232 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 Gene3D G3DSA:3.40.50.300 58 214 1.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 PANTHER PTHR18934:SF109 43 682 0.0 T 22-04-2016 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 PANTHER PTHR18934:SF109 719 847 0.0 T 22-04-2016 VPUCM_RS07865 65852966f9d8b0de42ebc371614656cd 1278 Gene3D G3DSA:3.40.50.300 253 398 8.3E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS16050 9bdc5b1c370c96c2b7181daf008e9df4 293 PANTHER PTHR33375 1 291 3.0E-90 T 22-04-2016 VPUCM_RS16050 9bdc5b1c370c96c2b7181daf008e9df4 293 SUPERFAMILY SSF109709 122 229 4.71E-33 T 22-04-2016 VPUCM_RS16050 9bdc5b1c370c96c2b7181daf008e9df4 293 Gene3D G3DSA:3.90.1530.10 34 136 4.4E-39 T 22-04-2016 VPUCM_RS16050 9bdc5b1c370c96c2b7181daf008e9df4 293 SUPERFAMILY SSF110849 40 132 6.54E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VPUCM_RS16050 9bdc5b1c370c96c2b7181daf008e9df4 293 Pfam PF02195 ParB-like nuclease domain 40 130 1.9E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VPUCM_RS16050 9bdc5b1c370c96c2b7181daf008e9df4 293 SMART SM00470 40 130 2.3E-35 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VPUCM_RS16050 9bdc5b1c370c96c2b7181daf008e9df4 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 213 2.8E-57 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VPUCM_RS00330 958f15c9abba6d216590124d1fc492ac 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00330 958f15c9abba6d216590124d1fc492ac 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 1.4E-250 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 VPUCM_RS00330 958f15c9abba6d216590124d1fc492ac 598 PANTHER PTHR21000 3 597 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00330 958f15c9abba6d216590124d1fc492ac 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00330 958f15c9abba6d216590124d1fc492ac 598 SUPERFAMILY SSF52016 418 596 4.47E-52 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VPUCM_RS00330 958f15c9abba6d216590124d1fc492ac 598 Pfam PF00920 Dehydratase family 68 594 7.1E-148 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS00330 958f15c9abba6d216590124d1fc492ac 598 PANTHER PTHR21000:SF9 3 597 0.0 T 22-04-2016 VPUCM_RS00330 958f15c9abba6d216590124d1fc492ac 598 SUPERFAMILY SSF143975 3 417 8.76E-131 T 22-04-2016 VPUCM_RS14795 2bda78555b73b6fc7e1dc701715ae3f5 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 335 1.5E-90 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VPUCM_RS14795 2bda78555b73b6fc7e1dc701715ae3f5 354 PANTHER PTHR32120:SF2 4 353 4.8E-157 T 22-04-2016 VPUCM_RS14795 2bda78555b73b6fc7e1dc701715ae3f5 354 Pfam PF03193 Protein of unknown function, DUF258 100 277 1.8E-57 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 VPUCM_RS14795 2bda78555b73b6fc7e1dc701715ae3f5 354 SUPERFAMILY SSF52540 114 337 1.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14795 2bda78555b73b6fc7e1dc701715ae3f5 354 Gene3D G3DSA:1.10.40.50 277 346 2.9E-24 T 22-04-2016 VPUCM_RS14795 2bda78555b73b6fc7e1dc701715ae3f5 354 Gene3D G3DSA:3.40.50.300 115 276 3.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14795 2bda78555b73b6fc7e1dc701715ae3f5 354 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 41 341 37.418 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VPUCM_RS14795 2bda78555b73b6fc7e1dc701715ae3f5 354 PANTHER PTHR32120 4 353 4.8E-157 T 22-04-2016 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.96E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.96E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.96E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 PRINTS PR00070 Dihydrofolate reductase signature 92 106 2.96E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 Gene3D G3DSA:3.40.430.10 1 159 1.3E-61 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 PANTHER PTHR22778:SF16 1 160 1.2E-45 T 22-04-2016 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 Pfam PF00186 Dihydrofolate reductase 3 159 8.3E-61 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 PANTHER PTHR22778 1 160 1.2E-45 T 22-04-2016 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 SUPERFAMILY SSF53597 1 159 1.7E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VPUCM_RS01785 6638f8a8677060a0168d4eea2205b822 160 PIRSF PIRSF000194 1 160 4.5E-62 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 SUPERFAMILY SSF51011 527 607 3.96E-12 T 22-04-2016 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 SUPERFAMILY SSF81296 1 109 8.75E-18 T 22-04-2016 IPR014756 Immunoglobulin E-set VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 6.9E-78 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 SUPERFAMILY SSF51445 113 527 2.22E-94 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 PANTHER PTHR10357 34 136 1.7E-176 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 PANTHER PTHR10357 171 571 1.7E-176 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 Pfam PF16657 Maltogenic Amylase, C-terminal domain 527 585 2.9E-6 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 PANTHER PTHR10357:SF144 34 136 1.7E-176 T 22-04-2016 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 PANTHER PTHR10357:SF144 171 571 1.7E-176 T 22-04-2016 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 8 104 1.8E-5 T 22-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 Gene3D G3DSA:3.20.20.80 118 520 1.1E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 SMART SM00642 126 518 8.4E-80 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 Gene3D G3DSA:2.60.40.10 16 117 1.0E-8 T 22-04-2016 IPR013783 Immunoglobulin-like fold VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 PIRSF PIRSF036918 1 608 1.4E-262 T 22-04-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 VPUCM_RS05740 fd2f84268a5bd95957886c14a0a95660 608 Gene3D G3DSA:2.60.40.1180 522 605 7.5E-18 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta VPUCM_RS05955 b74884a0790fe0647eab1b41ece8b285 398 PANTHER PTHR13369:SF1 98 250 1.3E-84 T 22-04-2016 VPUCM_RS05955 b74884a0790fe0647eab1b41ece8b285 398 PANTHER PTHR13369:SF1 322 397 1.3E-84 T 22-04-2016 VPUCM_RS05955 b74884a0790fe0647eab1b41ece8b285 398 Gene3D G3DSA:3.40.50.150 117 184 3.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS05955 b74884a0790fe0647eab1b41ece8b285 398 PANTHER PTHR13369 98 250 1.3E-84 T 22-04-2016 VPUCM_RS05955 b74884a0790fe0647eab1b41ece8b285 398 PANTHER PTHR13369 322 397 1.3E-84 T 22-04-2016 VPUCM_RS05955 b74884a0790fe0647eab1b41ece8b285 398 Pfam PF13679 Methyltransferase domain 108 230 8.4E-18 T 22-04-2016 IPR025714 Methyltransferase domain VPUCM_RS05955 b74884a0790fe0647eab1b41ece8b285 398 SUPERFAMILY SSF53335 118 198 9.41E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS14800 6435ba79bd90f18e97a269223d640f27 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 50.42 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VPUCM_RS14800 6435ba79bd90f18e97a269223d640f27 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 284 4.1E-88 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VPUCM_RS14800 6435ba79bd90f18e97a269223d640f27 285 PANTHER PTHR10067 4 280 4.1E-120 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VPUCM_RS14800 6435ba79bd90f18e97a269223d640f27 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 7.3E-63 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VPUCM_RS04805 2c479799fb37d0ef027edab22d855cf3 261 Gene3D G3DSA:1.10.3470.10 46 238 1.3E-8 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VPUCM_RS04805 2c479799fb37d0ef027edab22d855cf3 261 PANTHER PTHR30477:SF0 3 259 6.0E-80 T 22-04-2016 VPUCM_RS04805 2c479799fb37d0ef027edab22d855cf3 261 PANTHER PTHR30477 3 259 6.0E-80 T 22-04-2016 VPUCM_RS04805 2c479799fb37d0ef027edab22d855cf3 261 SUPERFAMILY SSF81345 2 253 5.62E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VPUCM_RS04805 2c479799fb37d0ef027edab22d855cf3 261 Pfam PF00950 ABC 3 transport family 1 256 2.2E-74 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 Gene3D G3DSA:3.30.2010.10 63 146 6.6E-18 T 22-04-2016 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 Pfam PF01435 Peptidase family M48 69 253 2.3E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 PANTHER PTHR22726 8 348 1.8E-122 T 22-04-2016 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 Pfam PF14559 Tetratricopeptide repeat 351 416 4.5E-12 T 22-04-2016 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 425 458 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 340 373 23.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 306 339 45.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 PANTHER PTHR22726:SF10 8 348 1.8E-122 T 22-04-2016 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 Gene3D G3DSA:1.25.40.10 310 455 2.6E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 480 32.501 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VPUCM_RS11735 37d655ce0f30ca1bf25c11a88432c3ec 483 SUPERFAMILY SSF48452 310 453 6.17E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS00320 6bc77d413a8b1cbac0b27b316549c104 134 PANTHER PTHR30561 1 111 3.3E-29 T 22-04-2016 VPUCM_RS00320 6bc77d413a8b1cbac0b27b316549c104 134 Pfam PF00893 Small Multidrug Resistance protein 6 94 4.8E-19 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 VPUCM_RS00320 6bc77d413a8b1cbac0b27b316549c104 134 PANTHER PTHR30561:SF2 1 111 3.3E-29 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 VPUCM_RS00320 6bc77d413a8b1cbac0b27b316549c104 134 SUPERFAMILY SSF103481 6 108 2.75E-14 T 22-04-2016 VPUCM_RS14390 7d3e3964a8aae44e7bc493ed0253e865 338 PIRSF PIRSF019169 1 328 1.1E-93 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VPUCM_RS14390 7d3e3964a8aae44e7bc493ed0253e865 338 SUPERFAMILY SSF53067 6 165 1.59E-6 T 22-04-2016 VPUCM_RS14390 7d3e3964a8aae44e7bc493ed0253e865 338 PANTHER PTHR32432:SF3 6 330 1.5E-46 T 22-04-2016 VPUCM_RS14390 7d3e3964a8aae44e7bc493ed0253e865 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 3.3E-73 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VPUCM_RS14390 7d3e3964a8aae44e7bc493ed0253e865 338 Gene3D G3DSA:3.30.420.40 3 99 2.4E-9 T 22-04-2016 VPUCM_RS14390 7d3e3964a8aae44e7bc493ed0253e865 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 216 1.5E-39 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VPUCM_RS14390 7d3e3964a8aae44e7bc493ed0253e865 338 Pfam PF11104 Type IV pilus assembly protein PilM; 237 326 1.8E-11 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VPUCM_RS14390 7d3e3964a8aae44e7bc493ed0253e865 338 PANTHER PTHR32432 6 330 1.5E-46 T 22-04-2016 VPUCM_RS02495 f32e281ef2cac2d0e63d33cf3e2c1ba0 437 PANTHER PTHR30588:SF0 2 437 2.6E-202 T 22-04-2016 VPUCM_RS02495 f32e281ef2cac2d0e63d33cf3e2c1ba0 437 PANTHER PTHR30588 2 437 2.6E-202 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VPUCM_RS02495 f32e281ef2cac2d0e63d33cf3e2c1ba0 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 9.1E-151 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VPUCM_RS02495 f32e281ef2cac2d0e63d33cf3e2c1ba0 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 1.6E-133 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VPUCM_RS04615 063a4f7421bfb33a532cc989b6a25d16 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 1.0E-67 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VPUCM_RS04615 063a4f7421bfb33a532cc989b6a25d16 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.323 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VPUCM_RS04615 063a4f7421bfb33a532cc989b6a25d16 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 2.6E-56 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VPUCM_RS08400 d0c86e7e4602fc531d44d7b7dfebdc92 882 PANTHER PTHR30462 1 881 0.0 T 22-04-2016 VPUCM_RS08400 d0c86e7e4602fc531d44d7b7dfebdc92 882 PANTHER PTHR30462:SF0 1 881 0.0 T 22-04-2016 VPUCM_RS08400 d0c86e7e4602fc531d44d7b7dfebdc92 882 Pfam PF02470 MlaD protein 47 138 6.0E-13 T 22-04-2016 IPR003399 Mce/MlaD VPUCM_RS08400 d0c86e7e4602fc531d44d7b7dfebdc92 882 Pfam PF02470 MlaD protein 283 356 7.2E-7 T 22-04-2016 IPR003399 Mce/MlaD VPUCM_RS08400 d0c86e7e4602fc531d44d7b7dfebdc92 882 Pfam PF02470 MlaD protein 752 820 1.4E-7 T 22-04-2016 IPR003399 Mce/MlaD VPUCM_RS08400 d0c86e7e4602fc531d44d7b7dfebdc92 882 Pfam PF02470 MlaD protein 398 463 4.4E-6 T 22-04-2016 IPR003399 Mce/MlaD VPUCM_RS07200 f11c1d40b90f2a446757ddd79c838838 121 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 32 113 4.4E-11 T 22-04-2016 IPR032032 Type VI secretion system (T6SS), amidase immunity protein VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:3.30.565.10 194 348 4.7E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF55785 8 102 8.9E-9 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF00989 PAS fold 7 111 2.5E-16 T 22-04-2016 IPR013767 PAS fold GO:0006355 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00388 129 194 3.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 PANTHER PTHR24423:SF488 5 266 9.9E-165 T 22-04-2016 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 PANTHER PTHR24423:SF488 282 348 9.9E-165 T 22-04-2016 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:3.30.450.20 7 111 3.5E-28 T 22-04-2016 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:1.10.287.130 124 186 3.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF47384 125 190 2.16E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 PANTHER PTHR24423 5 266 9.9E-165 T 22-04-2016 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 PANTHER PTHR24423 282 348 9.9E-165 T 22-04-2016 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00091 4 72 1.5E-7 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 4.1E-7 T 22-04-2016 IPR000014 PAS domain VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00387 233 348 2.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 5.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS00595 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF55874 198 347 1.3E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 SUPERFAMILY SSF50998 28 328 3.61E-45 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 22-04-2016 IPR019775 WD40 repeat, conserved site VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 Pfam PF13360 PQQ-like domain 170 286 5.6E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 PANTHER PTHR22847 53 285 2.6E-25 T 22-04-2016 VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 SMART SM00320 285 323 170.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 SMART SM00320 68 106 6.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 SMART SM00320 192 230 0.1 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 SMART SM00320 233 274 0.3 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 SMART SM00320 151 189 2.1E-5 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 VPUCM_RS14530 2d260f6e276edcc8c28c5be0be2e1b85 328 Gene3D G3DSA:2.130.10.10 36 327 6.1E-44 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VPUCM_RS10385 a75b91b6268949c47c1ebfb4b37ff336 443 Gene3D G3DSA:1.10.1130.10 7 44 8.8E-6 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain VPUCM_RS10385 a75b91b6268949c47c1ebfb4b37ff336 443 Gene3D G3DSA:1.10.1130.10 221 255 8.8E-6 T 22-04-2016 IPR012286 Tetrahaem cytochrome domain VPUCM_RS10385 a75b91b6268949c47c1ebfb4b37ff336 443 PANTHER PTHR30462 1 430 6.6E-187 T 22-04-2016 VPUCM_RS10385 a75b91b6268949c47c1ebfb4b37ff336 443 Pfam PF04403 Paraquat-inducible protein A 265 422 1.1E-53 T 22-04-2016 IPR007498 Paraquat-inducible protein A VPUCM_RS10385 a75b91b6268949c47c1ebfb4b37ff336 443 Pfam PF04403 Paraquat-inducible protein A 49 208 5.7E-38 T 22-04-2016 IPR007498 Paraquat-inducible protein A VPUCM_RS10385 a75b91b6268949c47c1ebfb4b37ff336 443 PANTHER PTHR30462:SF3 1 430 6.6E-187 T 22-04-2016 VPUCM_RS10385 a75b91b6268949c47c1ebfb4b37ff336 443 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 8 422 6.4E-105 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 VPUCM_RS04955 b77da2e27189b3d9026e9835648af305 154 Pfam PF07977 FabA-like domain 11 132 2.4E-5 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VPUCM_RS04955 b77da2e27189b3d9026e9835648af305 154 PIRSF PIRSF020565 1 154 6.8E-67 T 22-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VPUCM_RS04955 b77da2e27189b3d9026e9835648af305 154 Gene3D G3DSA:3.10.129.10 5 139 1.3E-22 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS04955 b77da2e27189b3d9026e9835648af305 154 SUPERFAMILY SSF54637 4 143 5.07E-29 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 SUPERFAMILY SSF64518 1 377 1.31E-95 T 22-04-2016 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.1E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 8.1E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 Pfam PF07196 Flagellin hook IN motif 195 249 5.8E-11 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 280 333 1.0E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 55 171 1.0E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 PANTHER PTHR30244 2 377 4.6E-167 T 22-04-2016 VPUCM_RS11650 d6a45a5c758c9addc834acf104499245 378 PANTHER PTHR30244:SF1 2 377 4.6E-167 T 22-04-2016 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 SUPERFAMILY SSF64518 1 377 1.31E-95 T 22-04-2016 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.1E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 8.1E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 Pfam PF07196 Flagellin hook IN motif 195 249 5.8E-11 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 280 333 1.0E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 55 171 1.0E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 PANTHER PTHR30244 2 377 4.6E-167 T 22-04-2016 VPUCM_RS12085 d6a45a5c758c9addc834acf104499245 378 PANTHER PTHR30244:SF1 2 377 4.6E-167 T 22-04-2016 VPUCM_RS02955 be3cd9aed86d91ba2c3280337128693b 107 Gene3D G3DSA:2.60.300.12 2 97 2.5E-36 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS02955 be3cd9aed86d91ba2c3280337128693b 107 SUPERFAMILY SSF89360 1 96 1.01E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS02955 be3cd9aed86d91ba2c3280337128693b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VPUCM_RS02955 be3cd9aed86d91ba2c3280337128693b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.9E-57 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 VPUCM_RS02955 be3cd9aed86d91ba2c3280337128693b 107 PANTHER PTHR10072 1 107 3.8E-53 T 22-04-2016 VPUCM_RS02955 be3cd9aed86d91ba2c3280337128693b 107 PANTHER PTHR10072:SF48 1 107 3.8E-53 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 VPUCM_RS02955 be3cd9aed86d91ba2c3280337128693b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.9E-38 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VPUCM_RS02955 be3cd9aed86d91ba2c3280337128693b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.0E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis VPUCM_RS04110 82795d5799798b7ae63db51d14daea9a 563 Gene3D G3DSA:3.40.50.980 189 367 4.9E-26 T 22-04-2016 VPUCM_RS04110 82795d5799798b7ae63db51d14daea9a 563 Pfam PF00501 AMP-binding enzyme 24 440 5.5E-87 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS04110 82795d5799798b7ae63db51d14daea9a 563 PANTHER PTHR24096:SF249 12 557 2.4E-254 T 22-04-2016 VPUCM_RS04110 82795d5799798b7ae63db51d14daea9a 563 SUPERFAMILY SSF56801 17 547 6.93E-110 T 22-04-2016 VPUCM_RS04110 82795d5799798b7ae63db51d14daea9a 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 22-04-2016 IPR020845 AMP-binding, conserved site VPUCM_RS04110 82795d5799798b7ae63db51d14daea9a 563 Gene3D G3DSA:2.30.38.10 368 430 9.4E-19 T 22-04-2016 VPUCM_RS04110 82795d5799798b7ae63db51d14daea9a 563 PANTHER PTHR24096 12 557 2.4E-254 T 22-04-2016 VPUCM_RS04110 82795d5799798b7ae63db51d14daea9a 563 Gene3D G3DSA:3.40.50.980 19 188 1.2E-27 T 22-04-2016 VPUCM_RS04495 481204e63331af68281f8b1c4f02f019 198 PANTHER PTHR30335 2 198 2.9E-147 T 22-04-2016 VPUCM_RS04495 481204e63331af68281f8b1c4f02f019 198 PIRSF PIRSF006102 1 198 4.0E-66 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS04495 481204e63331af68281f8b1c4f02f019 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.0E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS04495 481204e63331af68281f8b1c4f02f019 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.927 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VPUCM_RS04495 481204e63331af68281f8b1c4f02f019 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 5.6E-108 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VPUCM_RS04495 481204e63331af68281f8b1c4f02f019 198 PANTHER PTHR30335:SF1 2 198 2.9E-147 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VPUCM_RS07720 61cd2d0ea06470184954fb39848714ba 255 PANTHER PTHR30060:SF1 1 241 6.3E-74 T 22-04-2016 VPUCM_RS07720 61cd2d0ea06470184954fb39848714ba 255 Pfam PF03741 Integral membrane protein TerC family 16 203 8.4E-43 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 VPUCM_RS07720 61cd2d0ea06470184954fb39848714ba 255 PANTHER PTHR30060 1 241 6.3E-74 T 22-04-2016 VPUCM_RS13490 16978cbb7114fa9948cba29ded2baf39 231 PANTHER PTHR33607 23 230 2.3E-54 T 22-04-2016 VPUCM_RS13490 16978cbb7114fa9948cba29ded2baf39 231 Pfam PF04231 Endonuclease I 33 227 1.4E-46 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 VPUCM_RS13490 16978cbb7114fa9948cba29ded2baf39 231 SUPERFAMILY SSF54060 20 228 8.0E-94 T 22-04-2016 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 Gene3D G3DSA:1.10.1270.10 2 96 3.5E-37 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 Pfam PF01371 Trp repressor protein 9 93 4.9E-33 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 Hamap MF_00475 Trp operon repressor [trpR]. 6 103 23.815 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 88 5.7E-25 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 PANTHER PTHR38025 1 100 1.1E-34 T 22-04-2016 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 PIRSF PIRSF003196 1 100 1.8E-39 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 SUPERFAMILY SSF48295 2 94 1.1E-28 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 PANTHER PTHR38025:SF1 1 100 1.1E-34 T 22-04-2016 VPUCM_RS02710 c12396daaa9dd101ebdabd47d75487c2 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 2.0E-37 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 Gene3D G3DSA:3.40.50.720 2 179 1.0E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 PANTHER PTHR10366:SF39 2 342 2.2E-155 T 22-04-2016 VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 PANTHER PTHR10366 2 342 2.2E-155 T 22-04-2016 VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.0E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.0E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.0E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 9.2E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 SUPERFAMILY SSF51735 2 336 3.08E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 Gene3D G3DSA:3.90.25.10 264 337 9.3E-54 T 22-04-2016 VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 Gene3D G3DSA:3.90.25.10 180 232 9.3E-54 T 22-04-2016 VPUCM_RS04225 f6289a62456c815c4ca9fc1171232cfb 348 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 4.1E-140 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 71 85 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 PRINTS PR00301 70kDa heat shock protein signature 68 84 8.2E-34 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 PRINTS PR00301 70kDa heat shock protein signature 122 141 8.2E-34 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 PRINTS PR00301 70kDa heat shock protein signature 99 119 8.2E-34 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 Pfam PF00012 Hsp70 protein 1 189 2.7E-83 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 SUPERFAMILY SSF53067 1 116 2.8E-37 T 22-04-2016 VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 Gene3D G3DSA:3.30.420.40 53 95 9.1E-17 T 22-04-2016 VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 PANTHER PTHR19375 1 189 1.3E-118 T 22-04-2016 VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 Gene3D G3DSA:3.90.640.10 1 47 3.5E-13 T 22-04-2016 VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 SUPERFAMILY SSF100920 118 189 6.15E-27 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 PANTHER PTHR19375:SF173 1 189 1.3E-118 T 22-04-2016 VPUCM_RS19870 7a757f6427a4dfebba838d69f3f9a388 189 Gene3D G3DSA:2.60.34.10 105 189 4.2E-39 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 Gene3D G3DSA:3.20.20.70 4 361 4.6E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 331 2.6E-82 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 630 1.3E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 PANTHER PTHR22893:SF25 5 419 3.0E-244 T 22-04-2016 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 SUPERFAMILY SSF51971 376 521 3.35E-41 T 22-04-2016 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 SUPERFAMILY SSF51971 554 625 3.35E-41 T 22-04-2016 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 SUPERFAMILY SSF51395 4 364 6.11E-108 T 22-04-2016 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 1.4E-9 T 22-04-2016 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 1.4E-9 T 22-04-2016 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 Gene3D G3DSA:3.50.50.60 472 623 3.9E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 Gene3D G3DSA:3.50.50.60 362 465 1.5E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11120 cf3d1f36d00f3c2aa28ed84ac0e3bd5c 670 PANTHER PTHR22893 5 419 3.0E-244 T 22-04-2016 VPUCM_RS13240 22f4392f9bd06bfc2b0e3d6783c2d116 208 PANTHER PTHR11579 7 203 1.5E-82 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VPUCM_RS13240 22f4392f9bd06bfc2b0e3d6783c2d116 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 2.2E-82 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VPUCM_RS13240 22f4392f9bd06bfc2b0e3d6783c2d116 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VPUCM_RS13240 22f4392f9bd06bfc2b0e3d6783c2d116 208 SUPERFAMILY SSF53335 14 204 3.53E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13240 22f4392f9bd06bfc2b0e3d6783c2d116 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 3.7E-71 T 22-04-2016 VPUCM_RS13240 22f4392f9bd06bfc2b0e3d6783c2d116 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.618 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VPUCM_RS13240 22f4392f9bd06bfc2b0e3d6783c2d116 208 Gene3D G3DSA:3.40.50.150 16 204 1.2E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS01965 694919efe871c2ca4cd58eec5e940b0c 582 PANTHER PTHR37323 1 580 2.0E-117 T 22-04-2016 VPUCM_RS01965 694919efe871c2ca4cd58eec5e940b0c 582 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 6.5E-23 T 22-04-2016 VPUCM_RS01965 694919efe871c2ca4cd58eec5e940b0c 582 Gene3D G3DSA:3.40.630.30 320 453 4.7E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS01965 694919efe871c2ca4cd58eec5e940b0c 582 SMART SM00563 75 199 3.3E-4 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS01965 694919efe871c2ca4cd58eec5e940b0c 582 SUPERFAMILY SSF55729 313 459 4.18E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS01965 694919efe871c2ca4cd58eec5e940b0c 582 SUPERFAMILY SSF69593 46 248 9.02E-9 T 22-04-2016 VPUCM_RS01965 694919efe871c2ca4cd58eec5e940b0c 582 PANTHER PTHR37323:SF1 1 580 2.0E-117 T 22-04-2016 VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 PANTHER PTHR19211:SF7 1 555 0.0 T 22-04-2016 VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 SUPERFAMILY SSF52540 9 242 3.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 Gene3D G3DSA:3.40.50.300 322 532 4.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 Gene3D G3DSA:3.40.50.300 8 279 3.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 Pfam PF00005 ABC transporter 22 191 2.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 Pfam PF00005 ABC transporter 340 473 1.2E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 Pfam PF12848 ABC transporter 230 306 2.3E-13 T 22-04-2016 IPR032781 ABC-transporter extension domain VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 SUPERFAMILY SSF52540 302 525 1.58E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 9.0E-293 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 SMART SM00382 348 518 1.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 SMART SM00382 31 236 5.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS02700 e6da70235a3409749058182b52d7e2bf 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS02715 8ffbcaebdc8c325eac770856fbeaf68e 177 PANTHER PTHR34699:SF3 1 176 4.1E-90 T 22-04-2016 VPUCM_RS02715 8ffbcaebdc8c325eac770856fbeaf68e 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 29.952 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase VPUCM_RS02715 8ffbcaebdc8c325eac770856fbeaf68e 177 Gene3D G3DSA:3.90.950.10 5 172 1.1E-64 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VPUCM_RS02715 8ffbcaebdc8c325eac770856fbeaf68e 177 PANTHER PTHR34699 1 176 4.1E-90 T 22-04-2016 VPUCM_RS02715 8ffbcaebdc8c325eac770856fbeaf68e 177 SUPERFAMILY SSF52972 4 173 2.22E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VPUCM_RS02715 8ffbcaebdc8c325eac770856fbeaf68e 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 171 1.3E-45 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase VPUCM_RS02715 8ffbcaebdc8c325eac770856fbeaf68e 177 Pfam PF01931 Protein of unknown function DUF84 9 167 4.2E-58 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VPUCM_RS02345 7d2cc7efb4679f08ce08d259e49f5035 286 SUPERFAMILY SSF53850 90 280 2.53E-17 T 22-04-2016 VPUCM_RS02345 7d2cc7efb4679f08ce08d259e49f5035 286 SUPERFAMILY SSF46785 4 83 5.73E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02345 7d2cc7efb4679f08ce08d259e49f5035 286 Gene3D G3DSA:3.40.190.10 93 173 6.4E-5 T 22-04-2016 VPUCM_RS02345 7d2cc7efb4679f08ce08d259e49f5035 286 PANTHER PTHR30126 1 281 4.8E-45 T 22-04-2016 VPUCM_RS02345 7d2cc7efb4679f08ce08d259e49f5035 286 Pfam PF03466 LysR substrate binding domain 91 276 1.7E-15 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS02345 7d2cc7efb4679f08ce08d259e49f5035 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 6.9E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS02345 7d2cc7efb4679f08ce08d259e49f5035 286 PANTHER PTHR30126:SF11 1 281 4.8E-45 T 22-04-2016 VPUCM_RS02345 7d2cc7efb4679f08ce08d259e49f5035 286 Gene3D G3DSA:1.10.10.10 3 76 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 PANTHER PTHR11986 2 426 3.3E-201 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 Gene3D G3DSA:3.40.640.10 59 326 1.8E-92 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 PIRSF PIRSF000521 23 421 1.4E-35 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 SUPERFAMILY SSF53383 4 420 4.49E-135 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 PANTHER PTHR11986:SF8 2 426 3.3E-201 T 22-04-2016 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 Gene3D G3DSA:3.90.1150.10 329 420 6.9E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 Gene3D G3DSA:3.90.1150.10 3 58 6.9E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 Pfam PF00202 Aminotransferase class-III 24 418 6.8E-128 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 3.0E-178 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VPUCM_RS06005 5b79950b71abdf04ec4594f382deed72 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 49.08 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 8.4E-91 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 SUPERFAMILY SSF52402 25 213 4.19E-55 T 22-04-2016 VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 PANTHER PTHR23293:SF5 22 256 5.4E-92 T 22-04-2016 VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 PANTHER PTHR23293 22 256 5.4E-92 T 22-04-2016 VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 2.2E-86 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 2.7E-49 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 Gene3D G3DSA:3.40.50.620 15 221 2.8E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 PIRSF PIRSF000857 6 253 4.7E-55 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VPUCM_RS14250 5e00cbb19240b5dd30cfd06d5db668ab 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.455 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VPUCM_RS03465 7a0cd99eca17720df5b8e77a29539613 337 PANTHER PTHR30217:SF3 246 336 7.7E-214 T 22-04-2016 VPUCM_RS03465 7a0cd99eca17720df5b8e77a29539613 337 PANTHER PTHR30217:SF3 1 220 7.7E-214 T 22-04-2016 VPUCM_RS03465 7a0cd99eca17720df5b8e77a29539613 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS03465 7a0cd99eca17720df5b8e77a29539613 337 PANTHER PTHR30217 246 336 7.7E-214 T 22-04-2016 VPUCM_RS03465 7a0cd99eca17720df5b8e77a29539613 337 PANTHER PTHR30217 1 220 7.7E-214 T 22-04-2016 VPUCM_RS03465 7a0cd99eca17720df5b8e77a29539613 337 Pfam PF01136 Peptidase family U32 75 336 2.2E-70 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS16580 9b45b101730898f85ac2bc526e08db63 161 SUPERFAMILY SSF103481 81 161 9.81E-5 T 22-04-2016 VPUCM_RS16580 9b45b101730898f85ac2bc526e08db63 161 PANTHER PTHR22911 1 161 1.0E-87 T 22-04-2016 VPUCM_RS16580 9b45b101730898f85ac2bc526e08db63 161 PANTHER PTHR22911:SF58 1 161 1.0E-87 T 22-04-2016 VPUCM_RS16580 9b45b101730898f85ac2bc526e08db63 161 Pfam PF00892 EamA-like transporter family 47 161 4.6E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 2.5E-61 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 PANTHER PTHR23426 7 112 1.0E-40 T 22-04-2016 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.5E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 SUPERFAMILY SSF54292 5 107 2.22E-32 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VPUCM_RS02970 0f972e050c4e96ab8f77ec61e305e70c 112 Gene3D G3DSA:3.10.20.30 1 101 2.1E-34 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS15985 8de6f2d9a1c24cee3312c524ba2f25dd 401 PANTHER PTHR23502:SF28 1 368 2.3E-183 T 22-04-2016 VPUCM_RS15985 8de6f2d9a1c24cee3312c524ba2f25dd 401 Gene3D G3DSA:1.20.1250.20 201 374 4.1E-11 T 22-04-2016 VPUCM_RS15985 8de6f2d9a1c24cee3312c524ba2f25dd 401 Pfam PF07690 Major Facilitator Superfamily 13 349 7.5E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS15985 8de6f2d9a1c24cee3312c524ba2f25dd 401 Gene3D G3DSA:1.20.1250.20 9 182 7.7E-22 T 22-04-2016 VPUCM_RS15985 8de6f2d9a1c24cee3312c524ba2f25dd 401 PANTHER PTHR23502 1 368 2.3E-183 T 22-04-2016 VPUCM_RS15985 8de6f2d9a1c24cee3312c524ba2f25dd 401 SUPERFAMILY SSF103473 5 378 2.88E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS15985 8de6f2d9a1c24cee3312c524ba2f25dd 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 2.2E-82 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VPUCM_RS21835 9a3da7d14bc5f3492e03eff35f695454 318 SUPERFAMILY SSF56112 54 318 5.53E-50 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS21835 9a3da7d14bc5f3492e03eff35f695454 318 SMART SM00220 69 317 1.5E-30 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS21835 9a3da7d14bc5f3492e03eff35f695454 318 PANTHER PTHR24362:SF160 15 318 1.7E-103 T 22-04-2016 VPUCM_RS21835 9a3da7d14bc5f3492e03eff35f695454 318 Gene3D G3DSA:1.10.510.10 168 318 9.5E-26 T 22-04-2016 VPUCM_RS21835 9a3da7d14bc5f3492e03eff35f695454 318 Gene3D G3DSA:3.30.200.20 48 167 1.3E-18 T 22-04-2016 VPUCM_RS21835 9a3da7d14bc5f3492e03eff35f695454 318 Pfam PF00069 Protein kinase domain 69 270 1.2E-32 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS21835 9a3da7d14bc5f3492e03eff35f695454 318 PANTHER PTHR24362 15 318 1.7E-103 T 22-04-2016 VPUCM_RS15945 58609bc4e4f597aff90afd03001b7497 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 317 2.3E-115 T 22-04-2016 IPR016896 Protein of unknown function DUF2860 VPUCM_RS15945 58609bc4e4f597aff90afd03001b7497 318 PIRSF PIRSF028696 1 318 1.2E-130 T 22-04-2016 IPR016896 Protein of unknown function DUF2860 VPUCM_RS15945 58609bc4e4f597aff90afd03001b7497 318 SUPERFAMILY SSF56935 73 318 2.38E-5 T 22-04-2016 VPUCM_RS04380 8217604598dd11ca556bda2d1697cf51 367 Pfam PF06725 3D domain 272 348 5.1E-21 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VPUCM_RS04380 8217604598dd11ca556bda2d1697cf51 367 PANTHER PTHR30124:SF0 5 365 5.6E-123 T 22-04-2016 VPUCM_RS04380 8217604598dd11ca556bda2d1697cf51 367 Gene3D G3DSA:2.40.40.10 161 351 2.0E-42 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VPUCM_RS04380 8217604598dd11ca556bda2d1697cf51 367 Gene3D G3DSA:2.40.40.10 68 157 1.0E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VPUCM_RS04380 8217604598dd11ca556bda2d1697cf51 367 SUPERFAMILY SSF50685 22 350 4.88E-101 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VPUCM_RS04380 8217604598dd11ca556bda2d1697cf51 367 PANTHER PTHR30124 5 365 5.6E-123 T 22-04-2016 VPUCM_RS04380 8217604598dd11ca556bda2d1697cf51 367 Pfam PF03562 MltA specific insert domain 69 251 7.9E-38 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VPUCM_RS04380 8217604598dd11ca556bda2d1697cf51 367 SMART SM00925 119 252 6.9E-66 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VPUCM_RS01070 09693ffc77d2d10346856253f22f2333 352 PANTHER PTHR30160:SF7 1 344 6.0E-97 T 22-04-2016 VPUCM_RS01070 09693ffc77d2d10346856253f22f2333 352 SUPERFAMILY SSF53756 2 344 2.51E-96 T 22-04-2016 VPUCM_RS01070 09693ffc77d2d10346856253f22f2333 352 Gene3D G3DSA:3.40.50.2000 167 344 1.3E-57 T 22-04-2016 VPUCM_RS01070 09693ffc77d2d10346856253f22f2333 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 1.2E-69 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VPUCM_RS01070 09693ffc77d2d10346856253f22f2333 352 PANTHER PTHR30160 1 344 6.0E-97 T 22-04-2016 VPUCM_RS01070 09693ffc77d2d10346856253f22f2333 352 Gene3D G3DSA:3.40.50.2000 2 140 1.2E-50 T 22-04-2016 VPUCM_RS01070 09693ffc77d2d10346856253f22f2333 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 345 1.6E-148 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 VPUCM_RS11005 88bf318f339605b39aeb6e4638df9306 214 PANTHER PTHR30231:SF2 8 214 9.1E-115 T 22-04-2016 VPUCM_RS11005 88bf318f339605b39aeb6e4638df9306 214 SMART SM00479 18 204 3.2E-30 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS11005 88bf318f339605b39aeb6e4638df9306 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.573 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VPUCM_RS11005 88bf318f339605b39aeb6e4638df9306 214 PANTHER PTHR30231 8 214 9.1E-115 T 22-04-2016 VPUCM_RS11005 88bf318f339605b39aeb6e4638df9306 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.8E-100 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VPUCM_RS11005 88bf318f339605b39aeb6e4638df9306 214 Pfam PF00929 Exonuclease 20 195 7.9E-46 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS11005 88bf318f339605b39aeb6e4638df9306 214 SUPERFAMILY SSF53098 10 208 4.96E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS11005 88bf318f339605b39aeb6e4638df9306 214 Gene3D G3DSA:3.30.420.10 10 210 5.1E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 SUPERFAMILY SSF117143 78 403 1.96E-67 T 22-04-2016 VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 Pfam PF07559 Flagellar basal body protein FlaE 181 322 1.2E-21 T 22-04-2016 IPR011491 Flagellar hook protein FlgE VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 424 1.2E-95 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 363 441 1.1E-15 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 PANTHER PTHR30435:SF1 320 442 5.6E-88 T 22-04-2016 VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 PANTHER PTHR30435:SF1 1 126 5.6E-88 T 22-04-2016 VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 PANTHER PTHR30435 320 442 5.6E-88 T 22-04-2016 VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 PANTHER PTHR30435 1 126 5.6E-88 T 22-04-2016 VPUCM_RS12130 1321fe46549fdf257d9059095326eb13 442 Pfam PF00460 Flagella basal body rod protein 3 32 7.2E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VPUCM_RS14040 e4614fe8c5ed349ca60ab5a05b1f7e12 481 SUPERFAMILY SSF111283 18 480 1.16E-128 T 22-04-2016 VPUCM_RS14040 e4614fe8c5ed349ca60ab5a05b1f7e12 481 PANTHER PTHR30624:SF4 14 481 2.7E-248 T 22-04-2016 VPUCM_RS14040 e4614fe8c5ed349ca60ab5a05b1f7e12 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 6.1E-62 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS14040 e4614fe8c5ed349ca60ab5a05b1f7e12 481 PANTHER PTHR30624 14 481 2.7E-248 T 22-04-2016 VPUCM_RS14040 e4614fe8c5ed349ca60ab5a05b1f7e12 481 PIRSF PIRSF004919 14 481 1.7E-142 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS13375 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.7E-29 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VPUCM_RS13375 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Gene3D G3DSA:3.30.1910.10 1 65 6.4E-31 T 22-04-2016 VPUCM_RS13375 3b8ac1e2f2e6db60eb6026a3926eecb9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-30 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 PANTHER PTHR10937 1 610 0.0 T 22-04-2016 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 SUPERFAMILY SSF56235 2 234 2.23E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.336 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.1E-257 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.40.50.10490 245 446 1.3E-66 T 22-04-2016 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF01380 SIS domain 290 418 2.2E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF01380 SIS domain 463 592 8.7E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 PANTHER PTHR10937:SF0 1 610 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 7.1E-22 T 22-04-2016 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.40.50.10490 447 610 3.9E-65 T 22-04-2016 VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.60.20.10 2 237 2.3E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS01905 5b7c430e4dee7f230732ac88d62ee3ad 610 SUPERFAMILY SSF53697 245 610 1.58E-113 T 22-04-2016 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 7.5E-54 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.959 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 PANTHER PTHR11910 7 176 6.5E-55 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.46E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 8.7E-64 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 SUPERFAMILY SSF47928 3 105 2.75E-28 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VPUCM_RS16025 1b81adc832c18e96652fea14c4502b38 177 Gene3D G3DSA:1.10.520.20 3 106 7.6E-36 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 9.3E-59 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 462 6.8E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 SUPERFAMILY SSF55874 300 462 1.44E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 Gene3D G3DSA:1.10.287.130 238 306 7.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 SMART SM00387 354 464 3.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 SMART SM00388 248 310 5.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 SUPERFAMILY SSF47384 234 309 2.75E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 Pfam PF00672 HAMP domain 177 243 1.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 PANTHER PTHR24423:SF553 31 62 5.0E-152 T 22-04-2016 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 PANTHER PTHR24423:SF553 188 465 5.0E-152 T 22-04-2016 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 308 3.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 Gene3D G3DSA:3.30.565.10 312 463 3.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 PANTHER PTHR24423 31 62 5.0E-152 T 22-04-2016 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 PANTHER PTHR24423 188 465 5.0E-152 T 22-04-2016 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.2E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS14965 bc5eb566da4a162641697b1c9ef71d7e 467 SMART SM00304 194 247 9.6E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS04975 22720c270a2539254e266ad0666810f8 206 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 192 2.1E-11 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VPUCM_RS04975 22720c270a2539254e266ad0666810f8 206 Gene3D G3DSA:2.50.20.10 27 193 3.8E-14 T 22-04-2016 VPUCM_RS04975 22720c270a2539254e266ad0666810f8 206 SUPERFAMILY SSF89392 27 192 4.32E-19 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 SUPERFAMILY SSF52540 304 553 7.56E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 Pfam PF00005 ABC transporter 24 181 6.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 Pfam PF00005 ABC transporter 330 483 5.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 Gene3D G3DSA:3.40.50.300 302 555 8.1E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 Gene3D G3DSA:3.40.50.300 2 255 6.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 PANTHER PTHR24220 5 293 1.3E-205 T 22-04-2016 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 PANTHER PTHR24220 329 438 1.3E-205 T 22-04-2016 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 SUPERFAMILY SSF52540 3 253 2.83E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 2.9E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 8.1E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 SMART SM00382 338 534 1.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 SMART SM00382 32 231 2.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 PANTHER PTHR24220:SF336 5 293 1.3E-205 T 22-04-2016 VPUCM_RS00260 790de45b22b63a95b757a5522409336d 571 PANTHER PTHR24220:SF336 329 438 1.3E-205 T 22-04-2016 VPUCM_RS09335 16b57b6a68ba8546f23deddaa24c043a 306 PANTHER PTHR30465:SF74 1 306 6.6E-124 T 22-04-2016 VPUCM_RS09335 16b57b6a68ba8546f23deddaa24c043a 306 Gene3D G3DSA:1.10.3720.10 87 302 3.7E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09335 16b57b6a68ba8546f23deddaa24c043a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 3.2E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09335 16b57b6a68ba8546f23deddaa24c043a 306 PANTHER PTHR30465 1 306 6.6E-124 T 22-04-2016 VPUCM_RS09335 16b57b6a68ba8546f23deddaa24c043a 306 SUPERFAMILY SSF161098 91 290 4.97E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 Gene3D G3DSA:3.90.1150.10 287 421 7.4E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 Gene3D G3DSA:3.40.640.10 2 285 2.8E-118 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 PANTHER PTHR11808:SF12 4 234 2.9E-242 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 PANTHER PTHR11808:SF12 264 422 2.9E-242 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 5.3E-201 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 PIRSF PIRSF001434 1 422 5.7E-130 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 SUPERFAMILY SSF53383 1 421 1.05E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 2.8E-143 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 PANTHER PTHR11808 4 234 2.9E-242 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS03170 6177b2e83d52a653b684d20fc2aee6b2 422 PANTHER PTHR11808 264 422 2.9E-242 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557 194 637 0.0 T 22-04-2016 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557 136 166 0.0 T 22-04-2016 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557 4 102 0.0 T 22-04-2016 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 597 56.307 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 Pfam PF01964 Radical SAM ThiC family 144 592 3.1E-199 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 Pfam PF13667 ThiC-associated domain 22 104 1.6E-34 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557:SF1 194 637 0.0 T 22-04-2016 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557:SF1 136 166 0.0 T 22-04-2016 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 PANTHER PTHR30557:SF1 4 102 0.0 T 22-04-2016 VPUCM_RS15775 cb69184ce69a6d396514d66c0dd5d3f3 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 3.4E-219 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:3.30.1490.100 241 354 4.0E-41 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:1.10.150.20 169 238 1.3E-23 T 22-04-2016 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 SUPERFAMILY SSF56672 4 238 4.8E-92 T 22-04-2016 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.67 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF11798 IMS family HHH motif 170 200 7.7E-6 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 PANTHER PTHR11076 1 354 2.0E-196 T 22-04-2016 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 PANTHER PTHR11076:SF32 1 354 2.0E-196 T 22-04-2016 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF00817 impB/mucB/samB family 11 158 1.7E-47 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:3.30.70.270 70 168 4.3E-35 T 22-04-2016 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 1.1E-5 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS04520 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 SUPERFAMILY SSF100879 245 353 1.06E-24 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS12480 3322f517f8b26f1e1dc8f5c550fa2418 180 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.377 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VPUCM_RS12480 3322f517f8b26f1e1dc8f5c550fa2418 180 PANTHER PTHR38098 3 166 3.3E-50 T 22-04-2016 VPUCM_RS12480 3322f517f8b26f1e1dc8f5c550fa2418 180 Gene3D G3DSA:3.30.160.150 22 167 1.6E-56 T 22-04-2016 VPUCM_RS12480 3322f517f8b26f1e1dc8f5c550fa2418 180 PANTHER PTHR38098:SF1 3 166 3.3E-50 T 22-04-2016 VPUCM_RS12480 3322f517f8b26f1e1dc8f5c550fa2418 180 Pfam PF04390 Lipopolysaccharide-assembly 13 159 2.3E-21 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VPUCM_RS06595 c889b3b71631783a8c8744f8b49eaac7 362 PANTHER PTHR33376:SF5 7 347 1.2E-150 T 22-04-2016 VPUCM_RS06595 c889b3b71631783a8c8744f8b49eaac7 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 2.1E-69 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VPUCM_RS06595 c889b3b71631783a8c8744f8b49eaac7 362 PANTHER PTHR33376 7 347 1.2E-150 T 22-04-2016 VPUCM_RS06595 c889b3b71631783a8c8744f8b49eaac7 362 PIRSF PIRSF039026 4 362 7.2E-142 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 Gene3D G3DSA:1.10.10.350 366 464 1.6E-30 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 Gene3D G3DSA:3.90.800.10 68 183 5.2E-37 T 22-04-2016 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 Gene3D G3DSA:3.40.50.620 184 233 1.6E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 Gene3D G3DSA:3.40.50.620 2 67 1.6E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 Gene3D G3DSA:1.10.1160.10 236 316 5.3E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 SUPERFAMILY SSF52374 3 301 2.44E-110 T 22-04-2016 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 9.7E-117 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 468 5.7E-198 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 PANTHER PTHR11451:SF41 3 315 3.1E-102 T 22-04-2016 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 PANTHER PTHR11451 3 315 3.1E-102 T 22-04-2016 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 SUPERFAMILY SSF48163 302 464 7.46E-47 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS12205 03e3dea43a38d5bcd488f11b75184278 474 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 464 33.638 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VPUCM_RS15765 24a85eef3eabfc78a999719cf192d512 260 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 9 214 1.9E-88 T 22-04-2016 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VPUCM_RS15765 24a85eef3eabfc78a999719cf192d512 260 PANTHER PTHR10953 2 251 3.6E-97 T 22-04-2016 VPUCM_RS15765 24a85eef3eabfc78a999719cf192d512 260 PANTHER PTHR10953:SF158 2 251 3.6E-97 T 22-04-2016 VPUCM_RS15765 24a85eef3eabfc78a999719cf192d512 260 Pfam PF00899 ThiF family 10 247 2.6E-58 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VPUCM_RS15765 24a85eef3eabfc78a999719cf192d512 260 Gene3D G3DSA:3.40.50.720 3 251 4.6E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15765 24a85eef3eabfc78a999719cf192d512 260 SUPERFAMILY SSF69572 2 251 9.42E-75 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VPUCM_RS15605 161f1c142f6db141a2d9fed80ca5034f 403 PANTHER PTHR38043 25 392 2.2E-85 T 22-04-2016 VPUCM_RS15605 161f1c142f6db141a2d9fed80ca5034f 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 7.8E-108 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VPUCM_RS10770 55e7c1eaa96fc018a900f5e94e0f855a 248 SUPERFAMILY SSF50630 107 242 1.03E-41 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS10770 55e7c1eaa96fc018a900f5e94e0f855a 248 PANTHER PTHR38037 29 246 2.0E-54 T 22-04-2016 VPUCM_RS10770 55e7c1eaa96fc018a900f5e94e0f855a 248 Gene3D G3DSA:2.40.70.10 106 236 1.0E-47 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS10770 55e7c1eaa96fc018a900f5e94e0f855a 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 244 2.2E-47 T 22-04-2016 VPUCM_RS11320 ccbd00a36c0fc21e29d9bb0c27c6f4e1 1468 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1423 1464 3.6E-14 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal VPUCM_RS11320 ccbd00a36c0fc21e29d9bb0c27c6f4e1 1468 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 142 4.6E-25 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal VPUCM_RS07275 65f1b3f5c0a4f43b1e378520fbad91f9 266 SUPERFAMILY SSF52980 5 117 5.2E-16 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS07275 65f1b3f5c0a4f43b1e378520fbad91f9 266 Gene3D G3DSA:3.40.1350.10 3 118 3.1E-19 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VPUCM_RS07275 65f1b3f5c0a4f43b1e378520fbad91f9 266 Pfam PF04471 Restriction endonuclease 3 116 1.7E-12 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 SUPERFAMILY SSF143975 3 420 4.71E-136 T 22-04-2016 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 PANTHER PTHR21000 406 613 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 5.1E-267 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.358 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 PANTHER PTHR21000:SF11 406 613 0.0 T 22-04-2016 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 SUPERFAMILY SSF52016 421 608 1.65E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS15970 83c7e34405862bba7dfdcd30aa756899 613 Pfam PF00920 Dehydratase family 34 604 7.0E-220 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 Gene3D G3DSA:1.10.287.70 24 233 1.8E-51 T 22-04-2016 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 Pfam PF00520 Ion transport protein 24 235 5.9E-31 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PRINTS PR00169 Potassium channel signature 178 200 1.2E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PRINTS PR00169 Potassium channel signature 84 104 1.2E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PRINTS PR00169 Potassium channel signature 58 81 1.2E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PRINTS PR00169 Potassium channel signature 149 172 1.2E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PRINTS PR00169 Potassium channel signature 207 233 1.2E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PRINTS PR00169 Potassium channel signature 16 44 1.2E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PRINTS PR00169 Potassium channel signature 120 146 1.2E-35 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PANTHER PTHR11537 1 277 5.7E-96 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 SUPERFAMILY SSF81324 23 234 2.67E-51 T 22-04-2016 VPUCM_RS11050 fb95fb44c3a30b4ec3a20ff58d9cad02 280 PANTHER PTHR11537:SF137 1 277 5.7E-96 T 22-04-2016 VPUCM_RS06990 31bc96abd2543b1a64690d6f2d142889 135 PANTHER PTHR22769:SF17 9 113 6.5E-14 T 22-04-2016 VPUCM_RS06990 31bc96abd2543b1a64690d6f2d142889 135 SUPERFAMILY SSF55811 9 134 5.96E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS06990 31bc96abd2543b1a64690d6f2d142889 135 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VPUCM_RS06990 31bc96abd2543b1a64690d6f2d142889 135 Pfam PF00293 NUDIX domain 14 115 1.2E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS06990 31bc96abd2543b1a64690d6f2d142889 135 Gene3D G3DSA:3.90.79.10 9 130 1.8E-19 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS06990 31bc96abd2543b1a64690d6f2d142889 135 PRINTS PR00502 NUDIX hydrolase family signature 48 63 3.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase VPUCM_RS06990 31bc96abd2543b1a64690d6f2d142889 135 PRINTS PR00502 NUDIX hydrolase family signature 34 48 3.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase VPUCM_RS06990 31bc96abd2543b1a64690d6f2d142889 135 PANTHER PTHR22769 9 113 6.5E-14 T 22-04-2016 VPUCM_RS06755 3626222123a274af51fac4f3be0f21ac 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 3.8E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS06755 3626222123a274af51fac4f3be0f21ac 194 Gene3D G3DSA:3.40.630.30 15 186 7.9E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06755 3626222123a274af51fac4f3be0f21ac 194 SUPERFAMILY SSF55729 14 185 7.02E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06755 3626222123a274af51fac4f3be0f21ac 194 PANTHER PTHR13256 17 192 1.5E-62 T 22-04-2016 VPUCM_RS06755 3626222123a274af51fac4f3be0f21ac 194 PANTHER PTHR13256:SF24 17 192 1.5E-62 T 22-04-2016 VPUCM_RS10845 afb410755b544e4ff09176504a75056f 500 Pfam PF00534 Glycosyl transferases group 1 311 460 1.4E-15 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS10845 afb410755b544e4ff09176504a75056f 500 Pfam PF08323 Starch synthase catalytic domain 23 254 4.5E-66 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VPUCM_RS10845 afb410755b544e4ff09176504a75056f 500 Gene3D G3DSA:3.40.50.2000 271 479 2.2E-65 T 22-04-2016 VPUCM_RS10845 afb410755b544e4ff09176504a75056f 500 Hamap MF_00484 Glycogen synthase [glgA]. 21 498 39.23 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VPUCM_RS10845 afb410755b544e4ff09176504a75056f 500 PANTHER PTHR12526:SF17 6 500 6.8E-119 T 22-04-2016 VPUCM_RS10845 afb410755b544e4ff09176504a75056f 500 SUPERFAMILY SSF53756 18 500 1.1E-109 T 22-04-2016 VPUCM_RS10845 afb410755b544e4ff09176504a75056f 500 PANTHER PTHR12526 6 500 6.8E-119 T 22-04-2016 VPUCM_RS10845 afb410755b544e4ff09176504a75056f 500 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 22 497 1.0E-167 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 45.023 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737 149 291 4.1E-124 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737 2 91 4.1E-124 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737 310 407 4.1E-124 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:1.10.3930.10 68 135 9.8E-4 T 22-04-2016 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PIRSF PIRSF006356 1 407 5.0E-156 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737:SF13 149 291 4.1E-124 T 22-04-2016 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737:SF13 2 91 4.1E-124 T 22-04-2016 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PANTHER PTHR12737:SF13 310 407 4.1E-124 T 22-04-2016 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:3.75.10.10 149 407 2.2E-127 T 22-04-2016 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:3.75.10.10 1 67 2.2E-127 T 22-04-2016 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 2.9E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 3.2E-173 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 SUPERFAMILY SSF55909 3 407 3.93E-129 T 22-04-2016 VPUCM_RS13885 bc726e283dda04b14567b526bff27707 407 Pfam PF02274 Amidinotransferase 19 404 4.4E-97 T 22-04-2016 VPUCM_RS05745 7766204bb5ffb2109a2c17efa61a4c2c 486 SUPERFAMILY SSF55073 337 486 5.1E-37 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS05745 7766204bb5ffb2109a2c17efa61a4c2c 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 2.2E-37 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS05745 7766204bb5ffb2109a2c17efa61a4c2c 486 PANTHER PTHR10799 207 484 2.6E-25 T 22-04-2016 VPUCM_RS05745 7766204bb5ffb2109a2c17efa61a4c2c 486 PANTHER PTHR10799:SF750 207 484 2.6E-25 T 22-04-2016 VPUCM_RS05745 7766204bb5ffb2109a2c17efa61a4c2c 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 484 2.4E-42 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS05745 7766204bb5ffb2109a2c17efa61a4c2c 486 SMART SM00267 321 486 8.5E-40 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS05745 7766204bb5ffb2109a2c17efa61a4c2c 486 Gene3D G3DSA:3.30.70.270 334 485 1.0E-41 T 22-04-2016 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PANTHER PTHR30534 11 351 1.4E-110 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 4.8E-98 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 SUPERFAMILY SSF48029 26 135 2.75E-20 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF14841 FliG middle domain 134 206 4.1E-26 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 28 93 1.7E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 124 208 2.7E-31 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 SUPERFAMILY SSF48029 133 344 5.23E-67 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PANTHER PTHR30534:SF0 11 351 1.4E-110 T 22-04-2016 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PIRSF PIRSF003161 18 351 8.6E-115 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 214 349 1.2E-42 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF14842 FliG N-terminal domain 24 124 2.2E-28 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF01706 FliG C-terminal domain 236 343 4.8E-41 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS11595 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 1.0E-59 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VPUCM_RS04560 ae58c520445bd43c589bf3259bc1df21 222 Pfam PF04391 Protein of unknown function (DUF533) 43 221 1.0E-61 T 22-04-2016 IPR007486 Inner membrane protein YebE VPUCM_RS04560 ae58c520445bd43c589bf3259bc1df21 222 Gene3D G3DSA:1.10.3680.10 80 221 2.4E-29 T 22-04-2016 IPR029024 TerB-like VPUCM_RS04560 ae58c520445bd43c589bf3259bc1df21 222 SUPERFAMILY SSF158682 81 221 1.83E-27 T 22-04-2016 IPR029024 TerB-like VPUCM_RS00110 a36ded7ebba6754b0a92000b8dfb4308 82 Pfam PF01206 Sulfurtransferase TusA 10 79 9.4E-23 T 22-04-2016 IPR001455 TusA-like domain VPUCM_RS00110 a36ded7ebba6754b0a92000b8dfb4308 82 SUPERFAMILY SSF64307 9 80 6.02E-25 T 22-04-2016 IPR001455 TusA-like domain VPUCM_RS00110 a36ded7ebba6754b0a92000b8dfb4308 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain VPUCM_RS00110 a36ded7ebba6754b0a92000b8dfb4308 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 28.9 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 VPUCM_RS00110 a36ded7ebba6754b0a92000b8dfb4308 82 PANTHER PTHR33279 1 80 1.8E-51 T 22-04-2016 VPUCM_RS00110 a36ded7ebba6754b0a92000b8dfb4308 82 Gene3D G3DSA:3.30.110.40 8 80 1.6E-28 T 22-04-2016 IPR001455 TusA-like domain VPUCM_RS00110 a36ded7ebba6754b0a92000b8dfb4308 82 PANTHER PTHR33279:SF5 1 80 1.8E-51 T 22-04-2016 VPUCM_RS06450 6ee14c23292c7c08a9c03a58c543779d 377 SUPERFAMILY SSF51419 14 242 5.23E-42 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS06450 6ee14c23292c7c08a9c03a58c543779d 377 PANTHER PTHR11482:SF38 1 377 8.4E-184 T 22-04-2016 VPUCM_RS06450 6ee14c23292c7c08a9c03a58c543779d 377 SUPERFAMILY SSF50621 212 359 6.49E-23 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS06450 6ee14c23292c7c08a9c03a58c543779d 377 PIRSF PIRSF038941 1 372 1.3E-125 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VPUCM_RS06450 6ee14c23292c7c08a9c03a58c543779d 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.9E-162 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VPUCM_RS06450 6ee14c23292c7c08a9c03a58c543779d 377 PANTHER PTHR11482 1 377 8.4E-184 T 22-04-2016 VPUCM_RS06450 6ee14c23292c7c08a9c03a58c543779d 377 Gene3D G3DSA:3.20.20.10 32 236 1.7E-17 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS06450 6ee14c23292c7c08a9c03a58c543779d 377 Gene3D G3DSA:2.40.37.10 237 348 2.0E-13 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.475 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF53448 4 275 2.58E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF53448 341 358 2.58E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 Gene3D G3DSA:3.90.550.10 324 367 4.5E-74 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 Gene3D G3DSA:3.90.550.10 6 282 4.5E-74 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 3.0E-154 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 PANTHER PTHR22572 5 377 2.9E-154 T 22-04-2016 VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF51161 292 403 3.68E-15 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 PANTHER PTHR22572:SF10 5 377 2.9E-154 T 22-04-2016 VPUCM_RS10850 9226399360a3f1083f524f77c665b772 405 Pfam PF00483 Nucleotidyl transferase 6 273 2.8E-63 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 PANTHER PTHR11444:SF25 3 482 2.1E-293 T 22-04-2016 VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 3.0E-253 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.10.40.30 421 471 8.7E-20 T 22-04-2016 VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 Pfam PF00206 Lyase 23 355 5.7E-106 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.20.200.10 153 415 2.3E-87 T 22-04-2016 VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 Pfam PF10415 Fumarase C C-terminus 421 473 8.7E-18 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.10.275.10 14 152 3.9E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 SUPERFAMILY SSF48557 14 467 6.77E-145 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS14985 2440d6b700577b954c5d2a003e4bbe0b 483 PANTHER PTHR11444 3 482 2.1E-293 T 22-04-2016 IPR000362 Fumarate lyase family VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PANTHER PTHR11014:SF54 1 189 1.8E-200 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PIRSF PIRSF016599 5 489 2.8E-217 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 4.4E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 SUPERFAMILY SSF53187 401 486 1.28E-62 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 SUPERFAMILY SSF53187 15 186 1.28E-62 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 2.9E-21 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 Pfam PF07687 Peptidase dimerisation domain 211 296 1.5E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 1.9E-182 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PANTHER PTHR11014:SF54 208 283 1.8E-200 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PANTHER PTHR11014:SF54 334 490 1.8E-200 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PANTHER PTHR11014 208 283 1.8E-200 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PANTHER PTHR11014 334 490 1.8E-200 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 PANTHER PTHR11014 1 189 1.8E-200 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 Gene3D G3DSA:3.40.630.10 401 488 9.8E-108 T 22-04-2016 VPUCM_RS12750 077b9bf8ebc1a2b9303e35255fdf31ef 490 Gene3D G3DSA:3.40.630.10 7 185 9.8E-108 T 22-04-2016 VPUCM_RS05575 b64c7cd0c7072431bf056a24845751b6 325 Gene3D G3DSA:2.40.128.140 9 322 2.7E-96 T 22-04-2016 VPUCM_RS05575 b64c7cd0c7072431bf056a24845751b6 325 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 322 3.5E-82 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 Pfam PF00764 Arginosuccinate synthase 10 396 2.7E-145 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.557 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:3.90.1260.10 179 403 2.5E-88 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 PANTHER PTHR11587:SF6 6 404 0.0 T 22-04-2016 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 SUPERFAMILY SSF52402 7 170 3.75E-47 T 22-04-2016 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 PANTHER PTHR11587 6 404 0.0 T 22-04-2016 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 SUPERFAMILY SSF69864 177 402 5.49E-88 T 22-04-2016 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 4.4E-135 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VPUCM_RS14420 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:3.40.50.620 7 176 1.2E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS04995 4e4060641b85b2c917a5251868decbc2 122 PIRSF PIRSF030962 1 122 2.5E-49 T 22-04-2016 IPR016962 Dehydrase, ECs4332, predicted VPUCM_RS04995 4e4060641b85b2c917a5251868decbc2 122 Gene3D G3DSA:3.10.129.10 13 110 3.8E-12 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS04995 4e4060641b85b2c917a5251868decbc2 122 SUPERFAMILY SSF54637 12 108 6.53E-16 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 2.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 2.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 2.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 2.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 1.9E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.9E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.9E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.9E-9 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PANTHER PTHR22924 1 390 6.6E-123 T 22-04-2016 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 Gene3D G3DSA:1.10.490.10 2 140 2.9E-54 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 2.4E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 SUPERFAMILY SSF52343 255 393 1.96E-37 T 22-04-2016 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 Gene3D G3DSA:2.40.30.10 149 254 1.4E-33 T 22-04-2016 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 SUPERFAMILY SSF63380 148 253 8.44E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 SUPERFAMILY SSF46458 1 142 1.33E-36 T 22-04-2016 IPR009050 Globin-like VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.3E-14 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.789 T 22-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 Pfam PF00042 Globin 7 102 1.4E-14 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 Gene3D G3DSA:3.40.50.80 257 393 7.6E-37 T 22-04-2016 VPUCM_RS14655 e2617a3eed663c82cdc3123bccd45f72 394 PANTHER PTHR22924:SF49 1 390 6.6E-123 T 22-04-2016 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 SMART SM00518 12 288 7.9E-123 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 PANTHER PTHR21445 10 291 1.8E-159 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 SUPERFAMILY SSF51658 12 286 7.73E-100 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.269 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 1.3E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 PANTHER PTHR21445:SF0 10 291 1.8E-159 T 22-04-2016 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 11 287 1.8E-107 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VPUCM_RS02455 7ee05bbc8dfddcaca35f68b5cd8a2910 295 Gene3D G3DSA:3.20.20.150 11 287 1.5E-120 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VPUCM_RS05155 2cfb9a3af7d0d1e7ad7505751b85e97d 183 PANTHER PTHR22936 1 7 2.6E-53 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VPUCM_RS05155 2cfb9a3af7d0d1e7ad7505751b85e97d 183 Gene3D G3DSA:1.20.1540.10 6 173 2.5E-17 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VPUCM_RS05155 2cfb9a3af7d0d1e7ad7505751b85e97d 183 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 171 1.0E-48 T 22-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria VPUCM_RS05155 2cfb9a3af7d0d1e7ad7505751b85e97d 183 PANTHER PTHR22936 23 173 2.6E-53 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VPUCM_RS05155 2cfb9a3af7d0d1e7ad7505751b85e97d 183 SUPERFAMILY SSF144091 4 173 5.75E-28 T 22-04-2016 VPUCM_RS05155 2cfb9a3af7d0d1e7ad7505751b85e97d 183 PANTHER PTHR22936:SF18 23 173 2.6E-53 T 22-04-2016 VPUCM_RS05155 2cfb9a3af7d0d1e7ad7505751b85e97d 183 Pfam PF01694 Rhomboid family 34 173 2.5E-13 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VPUCM_RS05155 2cfb9a3af7d0d1e7ad7505751b85e97d 183 PANTHER PTHR22936:SF18 1 7 2.6E-53 T 22-04-2016 VPUCM_RS03230 5d8a684680091cd8007df1bee8e4a210 377 PANTHER PTHR38733:SF1 4 364 3.0E-13 T 22-04-2016 VPUCM_RS03230 5d8a684680091cd8007df1bee8e4a210 377 PANTHER PTHR38733 4 364 3.0E-13 T 22-04-2016 VPUCM_RS03230 5d8a684680091cd8007df1bee8e4a210 377 Pfam PF10117 McrBC 5-methylcytosine restriction system component 23 317 4.7E-23 T 22-04-2016 IPR019292 5-methylcytosine restriction system component VPUCM_RS03230 5d8a684680091cd8007df1bee8e4a210 377 PIRSF PIRSF003109 13 371 1.9E-109 T 22-04-2016 IPR014407 McrBC 5-methylcytosine restriction system component, bacterial VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:3.40.50.2300 58 167 2.8E-34 T 22-04-2016 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:1.10.260.40 1 57 3.8E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:3.40.50.2300 168 330 1.7E-63 T 22-04-2016 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 PANTHER PTHR30146 1 335 5.6E-148 T 22-04-2016 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 PANTHER PTHR30146:SF4 1 335 5.6E-148 T 22-04-2016 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.2E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 SMART SM00354 1 71 2.4E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.0E-40 T 22-04-2016 VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 SUPERFAMILY SSF53822 60 332 4.71E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS01410 b6c4100ac8e9f651a3d01dd11455db2d 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS05680 b77996b6fe3ac94dc72ceda7c02148fe 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 5.1E-15 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VPUCM_RS05680 b77996b6fe3ac94dc72ceda7c02148fe 300 PANTHER PTHR30465 17 300 2.1E-142 T 22-04-2016 VPUCM_RS05680 b77996b6fe3ac94dc72ceda7c02148fe 300 SUPERFAMILY SSF161098 97 281 1.44E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05680 b77996b6fe3ac94dc72ceda7c02148fe 300 PANTHER PTHR30465:SF9 17 300 2.1E-142 T 22-04-2016 VPUCM_RS05680 b77996b6fe3ac94dc72ceda7c02148fe 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.1E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05680 b77996b6fe3ac94dc72ceda7c02148fe 300 Gene3D G3DSA:1.10.3720.10 100 297 5.4E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 SUPERFAMILY SSF50249 1 105 2.48E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 Gene3D G3DSA:3.30.1360.30 276 413 1.9E-46 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 PANTHER PTHR22594:SF5 370 571 5.7E-250 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 PANTHER PTHR22594:SF5 1 296 5.7E-250 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.0E-104 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 Pfam PF02938 GAD domain 307 406 2.0E-30 T 22-04-2016 IPR029351 GAD domain VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 SUPERFAMILY SSF55261 288 419 2.78E-46 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 Gene3D G3DSA:3.30.930.10 131 275 6.6E-110 T 22-04-2016 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 Gene3D G3DSA:3.30.930.10 414 584 6.6E-110 T 22-04-2016 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 7.2E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.794 T 22-04-2016 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 SUPERFAMILY SSF55681 420 583 2.49E-100 T 22-04-2016 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 SUPERFAMILY SSF55681 108 287 2.49E-100 T 22-04-2016 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 PANTHER PTHR22594 370 571 5.7E-250 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 PANTHER PTHR22594 1 296 5.7E-250 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 7.1E-266 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VPUCM_RS10750 851d18bdc19e2ec151681a0117abc816 592 Gene3D G3DSA:2.40.50.140 1 106 4.5E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS11705 902292351d811186df8e8de1193d7599 339 PIRSF PIRSF026343 4 339 6.0E-122 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC VPUCM_RS11705 902292351d811186df8e8de1193d7599 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 34.469 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC VPUCM_RS11705 902292351d811186df8e8de1193d7599 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 1.4E-105 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.1E-124 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 Gene3D G3DSA:3.50.50.60 234 313 2.9E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.1E-38 T 22-04-2016 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.1E-38 T 22-04-2016 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.1E-38 T 22-04-2016 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.1E-38 T 22-04-2016 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-38 T 22-04-2016 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 Gene3D G3DSA:3.50.50.60 5 119 2.9E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 SUPERFAMILY SSF51905 2 313 3.54E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PANTHER PTHR22912:SF48 1 314 1.2E-166 T 22-04-2016 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 Gene3D G3DSA:3.50.50.60 120 233 3.7E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.5E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PANTHER PTHR22912 1 314 1.2E-166 T 22-04-2016 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS09770 82b69183d243d073893a879dab50a0b4 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.8E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 631 37.392 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 Pfam PF01434 Peptidase family M41 383 592 1.3E-82 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 Pfam PF06480 FtsH Extracellular 5 94 9.9E-12 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 SMART SM00382 185 324 5.1E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 Gene3D G3DSA:1.10.8.60 333 406 4.4E-27 T 22-04-2016 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 Gene3D G3DSA:3.40.50.300 145 332 2.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 SUPERFAMILY SSF140990 403 597 3.14E-76 T 22-04-2016 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 PANTHER PTHR23076 1 620 0.0 T 22-04-2016 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 4.2E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 SUPERFAMILY SSF52540 144 392 9.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03375 37ace9cfb4ae64464d587061b13debb7 659 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 5.5E-244 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 VPUCM_RS09605 e3322d0d61802b779f3d622f8cad0f30 105 Pfam PF01906 Putative heavy-metal-binding 1 103 1.1E-39 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 VPUCM_RS09605 e3322d0d61802b779f3d622f8cad0f30 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 26.224 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 VPUCM_RS09605 e3322d0d61802b779f3d622f8cad0f30 105 PANTHER PTHR34068:SF3 1 103 6.6E-44 T 22-04-2016 VPUCM_RS09605 e3322d0d61802b779f3d622f8cad0f30 105 Gene3D G3DSA:3.30.110.70 1 103 2.8E-38 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 VPUCM_RS09605 e3322d0d61802b779f3d622f8cad0f30 105 PANTHER PTHR34068 1 103 6.6E-44 T 22-04-2016 VPUCM_RS09605 e3322d0d61802b779f3d622f8cad0f30 105 SUPERFAMILY SSF117782 1 103 4.97E-38 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 VPUCM_RS07220 7eef0c3ab5f1e0f07483827496e23173 138 SUPERFAMILY SSF55729 18 126 4.25E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07220 7eef0c3ab5f1e0f07483827496e23173 138 Pfam PF13673 Acetyltransferase (GNAT) domain 35 123 7.4E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS07220 7eef0c3ab5f1e0f07483827496e23173 138 PANTHER PTHR13355 28 135 9.7E-14 T 22-04-2016 VPUCM_RS07220 7eef0c3ab5f1e0f07483827496e23173 138 Gene3D G3DSA:3.40.630.30 28 123 5.3E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07220 7eef0c3ab5f1e0f07483827496e23173 138 PANTHER PTHR13355:SF5 28 135 9.7E-14 T 22-04-2016 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 PANTHER PTHR30330 1 444 2.5E-227 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 Pfam PF01235 Sodium:alanine symporter family 54 445 1.3E-137 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 4.4E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 4.4E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 4.4E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.4E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.4E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 4.4E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 PANTHER PTHR30330:SF3 1 444 2.5E-227 T 22-04-2016 VPUCM_RS09050 17ca4cb4a50bc88b59219201c5a0f831 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 1.2E-152 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VPUCM_RS05655 f273521a20489cd1a35c36c2f6b2d2c3 159 SUPERFAMILY SSF55040 11 155 1.7E-61 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VPUCM_RS05655 f273521a20489cd1a35c36c2f6b2d2c3 159 PANTHER PTHR22960 1 158 2.1E-107 T 22-04-2016 VPUCM_RS05655 f273521a20489cd1a35c36c2f6b2d2c3 159 Pfam PF01967 MoaC family 15 150 8.4E-56 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VPUCM_RS05655 f273521a20489cd1a35c36c2f6b2d2c3 159 Gene3D G3DSA:3.30.70.640 3 158 4.0E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VPUCM_RS05655 f273521a20489cd1a35c36c2f6b2d2c3 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.058 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 VPUCM_RS05655 f273521a20489cd1a35c36c2f6b2d2c3 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.1E-72 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 VPUCM_RS05440 39621eeae2169339b24abbcbbfc1629c 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 661 3.2E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS05440 39621eeae2169339b24abbcbbfc1629c 663 Pfam PF00672 HAMP domain 315 382 9.9E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS05440 39621eeae2169339b24abbcbbfc1629c 663 Gene3D G3DSA:1.10.287.950 416 632 5.5E-55 T 22-04-2016 VPUCM_RS05440 39621eeae2169339b24abbcbbfc1629c 663 PANTHER PTHR32089 1 663 5.4E-234 T 22-04-2016 VPUCM_RS05440 39621eeae2169339b24abbcbbfc1629c 663 SMART SM00283 401 662 6.1E-74 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS05440 39621eeae2169339b24abbcbbfc1629c 663 PANTHER PTHR32089:SF58 1 663 5.4E-234 T 22-04-2016 VPUCM_RS05440 39621eeae2169339b24abbcbbfc1629c 663 SUPERFAMILY SSF58104 354 663 2.62E-73 T 22-04-2016 VPUCM_RS05440 39621eeae2169339b24abbcbbfc1629c 663 SMART SM00304 334 386 4.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS10755 d02562a3250d8933f2b2b1cbea3ce3d9 288 PANTHER PTHR30348:SF3 6 288 1.8E-82 T 22-04-2016 VPUCM_RS10755 d02562a3250d8933f2b2b1cbea3ce3d9 288 PANTHER PTHR30348 6 288 1.8E-82 T 22-04-2016 VPUCM_RS10755 d02562a3250d8933f2b2b1cbea3ce3d9 288 SUPERFAMILY SSF117396 5 265 2.09E-72 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VPUCM_RS10755 d02562a3250d8933f2b2b1cbea3ce3d9 288 Pfam PF01904 Protein of unknown function DUF72 23 261 8.8E-57 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VPUCM_RS10755 d02562a3250d8933f2b2b1cbea3ce3d9 288 Gene3D G3DSA:3.20.20.410 3 274 5.7E-76 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VPUCM_RS03340 ea03ef3f7c5d0a09d19a811e5eed59f7 174 PANTHER PTHR11079:SF72 10 157 3.3E-51 T 22-04-2016 VPUCM_RS03340 ea03ef3f7c5d0a09d19a811e5eed59f7 174 SUPERFAMILY SSF53927 5 159 6.82E-56 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VPUCM_RS03340 ea03ef3f7c5d0a09d19a811e5eed59f7 174 PANTHER PTHR11079 10 157 3.3E-51 T 22-04-2016 VPUCM_RS03340 ea03ef3f7c5d0a09d19a811e5eed59f7 174 Pfam PF14437 MafB19-like deaminase 10 155 1.9E-31 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VPUCM_RS03340 ea03ef3f7c5d0a09d19a811e5eed59f7 174 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.254 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VPUCM_RS03340 ea03ef3f7c5d0a09d19a811e5eed59f7 174 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VPUCM_RS03340 ea03ef3f7c5d0a09d19a811e5eed59f7 174 Gene3D G3DSA:3.40.140.10 5 153 1.3E-58 T 22-04-2016 VPUCM_RS15750 8151c779027fd01511d12d163cac7ab9 375 Pfam PF04055 Radical SAM superfamily 81 223 1.7E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS15750 8151c779027fd01511d12d163cac7ab9 375 SUPERFAMILY SSF102114 38 366 9.03E-55 T 22-04-2016 VPUCM_RS15750 8151c779027fd01511d12d163cac7ab9 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 362 3.2E-26 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS15750 8151c779027fd01511d12d163cac7ab9 375 Gene3D G3DSA:3.20.20.70 37 366 8.0E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS15750 8151c779027fd01511d12d163cac7ab9 375 PANTHER PTHR22976:SF17 3 371 1.0E-204 T 22-04-2016 VPUCM_RS15750 8151c779027fd01511d12d163cac7ab9 375 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 2 371 1.1E-182 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 VPUCM_RS15750 8151c779027fd01511d12d163cac7ab9 375 PANTHER PTHR22976 3 371 1.0E-204 T 22-04-2016 VPUCM_RS15750 8151c779027fd01511d12d163cac7ab9 375 SMART SM00876 256 364 2.0E-35 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 PANTHER PTHR30009 6 475 3.6E-236 T 22-04-2016 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 4.2E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 PANTHER PTHR30009:SF2 6 475 3.6E-236 T 22-04-2016 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.5E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.4E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 Gene3D G3DSA:3.30.1360.60 397 472 8.3E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 SUPERFAMILY SSF55604 399 472 9.68E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS10525 a2c77030d9baaaa1054171768da35a5e 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.8E-198 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.0E-66 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.082 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF02810 SEC-C motif 888 906 1.7E-10 T 22-04-2016 IPR004027 SEC-C motif VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF81886 884 896 1.06E-83 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF81886 620 840 1.06E-83 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 ProSitePatterns PS01312 SecA family signature. 501 516 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF07517 SecA DEAD-like domain 7 403 7.5E-134 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:1.10.3060.10 648 831 1.1E-58 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 SMART SM00957 6 403 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PANTHER PTHR30612 551 908 0.0 T 22-04-2016 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PANTHER PTHR30612 1 521 0.0 T 22-04-2016 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF52540 418 610 4.29E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF01043 SecA preprotein cross-linking domain 232 359 1.5E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.90.1440.10 230 369 2.3E-46 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.40.50.300 2 228 5.0E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.40.50.300 370 417 5.0E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF81767 227 369 1.16E-42 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF52540 369 416 2.56E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF52540 5 228 2.56E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.40.50.300 418 619 2.6E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 SMART SM00958 228 359 2.8E-82 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 340 362 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 170 190 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 63 87 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 101 115 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 414 427 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 117 127 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS02295 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 377 394 3.2E-72 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 SUPERFAMILY SSF88723 7 68 4.12E-14 T 22-04-2016 IPR029060 PIN domain-like VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 SUPERFAMILY SSF88723 104 160 4.12E-14 T 22-04-2016 IPR029060 PIN domain-like VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 PANTHER PTHR30473:SF2 6 182 2.2E-202 T 22-04-2016 VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 PANTHER PTHR30473:SF2 200 458 2.2E-202 T 22-04-2016 VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 Gene3D G3DSA:3.40.50.1010 9 67 1.9E-15 T 22-04-2016 IPR029060 PIN domain-like VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 Gene3D G3DSA:3.40.50.1010 104 151 1.9E-15 T 22-04-2016 IPR029060 PIN domain-like VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 Gene3D G3DSA:3.40.50.300 246 456 4.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 SUPERFAMILY SSF52540 247 437 1.45E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 Pfam PF13638 PIN domain 9 150 6.5E-35 T 22-04-2016 IPR002716 PIN domain VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 PANTHER PTHR30473 6 182 2.2E-202 T 22-04-2016 VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 PANTHER PTHR30473 200 458 2.2E-202 T 22-04-2016 VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 SMART SM00670 7 141 1.8E-10 T 22-04-2016 IPR002716 PIN domain VPUCM_RS14035 0c68b27cc912be1753e8a9be40e748c2 458 Pfam PF02562 PhoH-like protein 248 452 9.5E-54 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 Gene3D G3DSA:1.20.120.50 3 131 1.1E-28 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 8.2E-9 T 22-04-2016 IPR012312 Haemerythrin-like VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 SMART SM00267 195 367 8.7E-48 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 SUPERFAMILY SSF55073 211 366 8.63E-44 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 1.3E-46 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 1.1E-42 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 Gene3D G3DSA:3.30.70.270 208 369 5.4E-46 T 22-04-2016 VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 132 8.0E-32 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 PANTHER PTHR10799:SF750 239 368 8.5E-28 T 22-04-2016 VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 PANTHER PTHR10799:SF750 1 40 8.5E-28 T 22-04-2016 VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 SUPERFAMILY SSF47188 3 131 1.57E-26 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 PANTHER PTHR10799 239 368 8.5E-28 T 22-04-2016 VPUCM_RS09575 4d47233895168fd40bfae2c30a667549 381 PANTHER PTHR10799 1 40 8.5E-28 T 22-04-2016 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 SMART SM00535 20 148 6.3E-56 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 4.3E-75 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 Gene3D G3DSA:1.10.1520.10 5 144 1.4E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 SUPERFAMILY SSF54768 108 222 5.19E-29 T 22-04-2016 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 Pfam PF14622 Ribonuclease-III-like 20 140 3.3E-33 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 PANTHER PTHR11207 1 222 2.8E-101 T 22-04-2016 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.029 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 Gene3D G3DSA:3.30.160.20 152 223 5.7E-28 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.1E-16 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 SUPERFAMILY SSF69065 5 158 6.98E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VPUCM_RS13320 c3b7a982cf4ba04917f422397c2b71a5 225 SMART SM00358 155 223 1.4E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VPUCM_RS08200 0734bb1bcc5f6ea51df1fd071a0e098a 122 Pfam PF12472 Phage related protein 63 119 1.2E-18 T 22-04-2016 IPR021096 Vibrio phage VSK, Orf152 VPUCM_RS08200 0734bb1bcc5f6ea51df1fd071a0e098a 122 Gene3D G3DSA:1.10.260.40 19 63 3.2E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS15675 cf46bfa7935d354c12224b30a5e2393e 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 1.3E-38 T 22-04-2016 IPR022080 Protein of unknown function DUF3630 VPUCM_RS12450 7622525c5d6652173f61184a61460d2e 365 PANTHER PTHR30473 2 346 2.3E-204 T 22-04-2016 VPUCM_RS12450 7622525c5d6652173f61184a61460d2e 365 Pfam PF02562 PhoH-like protein 120 323 4.6E-94 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 VPUCM_RS12450 7622525c5d6652173f61184a61460d2e 365 Gene3D G3DSA:3.40.50.300 120 323 3.5E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12450 7622525c5d6652173f61184a61460d2e 365 PANTHER PTHR30473:SF1 2 346 2.3E-204 T 22-04-2016 VPUCM_RS12450 7622525c5d6652173f61184a61460d2e 365 SUPERFAMILY SSF52540 119 320 9.91E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10910 cbcd5ef2f6badb626b962279ab999227 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VPUCM_RS10910 cbcd5ef2f6badb626b962279ab999227 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VPUCM_RS10910 cbcd5ef2f6badb626b962279ab999227 741 SUPERFAMILY SSF53659 5 740 0.0 T 22-04-2016 VPUCM_RS10910 cbcd5ef2f6badb626b962279ab999227 741 PIRSF PIRSF009407 1 741 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VPUCM_RS10910 cbcd5ef2f6badb626b962279ab999227 741 PANTHER PTHR36999 2 741 0.0 T 22-04-2016 VPUCM_RS10910 cbcd5ef2f6badb626b962279ab999227 741 Gene3D G3DSA:3.40.718.10 540 647 5.9E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VPUCM_RS10910 cbcd5ef2f6badb626b962279ab999227 741 Gene3D G3DSA:3.40.718.10 341 364 5.9E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VPUCM_RS10910 cbcd5ef2f6badb626b962279ab999227 741 Gene3D G3DSA:3.40.718.10 188 289 5.9E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VPUCM_RS04750 20b3b78ea5dcf787a301aeff183a25b8 251 SUPERFAMILY SSF53335 73 212 8.03E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS04750 20b3b78ea5dcf787a301aeff183a25b8 251 Gene3D G3DSA:3.40.50.150 65 212 8.4E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS04750 20b3b78ea5dcf787a301aeff183a25b8 251 Pfam PF08241 Methyltransferase domain 61 125 6.7E-9 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VPUCM_RS04750 20b3b78ea5dcf787a301aeff183a25b8 251 PANTHER PTHR10108 72 223 1.5E-75 T 22-04-2016 VPUCM_RS04750 20b3b78ea5dcf787a301aeff183a25b8 251 PANTHER PTHR10108:SF836 72 223 1.5E-75 T 22-04-2016 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 Gene3D G3DSA:1.10.10.60 268 332 6.4E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 PANTHER PTHR32071:SF38 1 333 4.0E-208 T 22-04-2016 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 SUPERFAMILY SSF52540 4 237 1.33E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 Pfam PF00158 Sigma-54 interaction domain 5 167 1.1E-57 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 6.0E-5 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 6.0E-5 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 6.0E-5 T 22-04-2016 IPR000641 CbxX/CfqX GO:0005524 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 Pfam PF02954 Bacterial regulatory protein, Fis family 296 324 4.4E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 330 2.1E-165 T 22-04-2016 IPR014317 Transcription activator PspF VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 Gene3D G3DSA:1.10.8.60 177 238 1.0E-21 T 22-04-2016 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 PANTHER PTHR32071 1 333 4.0E-208 T 22-04-2016 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 SMART SM00382 25 177 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 2.0E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 2.0E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 Gene3D G3DSA:3.40.50.300 3 176 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VPUCM_RS10160 c3687608a663693b23e4c952999fc0a4 336 SUPERFAMILY SSF46689 278 332 7.17E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS11680 f6e2957459d3de9a059fe0b8f74d29c1 95 PIRSF PIRSF037266 1 94 4.6E-41 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VPUCM_RS11680 f6e2957459d3de9a059fe0b8f74d29c1 95 Pfam PF09904 Winged helix-turn helix 4 91 4.1E-37 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VPUCM_RS14090 dc945b311604295f40252829071c83a3 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.7E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 SUPERFAMILY SSF46785 2 109 2.13E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 Pfam PF03466 LysR substrate binding domain 89 287 3.3E-44 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 Gene3D G3DSA:3.40.190.10 176 260 2.9E-17 T 22-04-2016 VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 PANTHER PTHR30419:SF4 1 289 7.2E-106 T 22-04-2016 VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 Gene3D G3DSA:3.40.190.10 90 175 9.5E-20 T 22-04-2016 VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 Gene3D G3DSA:1.10.10.10 1 85 7.0E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 PANTHER PTHR30419 1 289 7.2E-106 T 22-04-2016 VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 SUPERFAMILY SSF53850 90 288 1.0E-41 T 22-04-2016 VPUCM_RS09450 eb545ca0a19577d20ee603083ab37c0c 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS11485 242765337cb5a724b96c4e4d6f654d01 366 SUPERFAMILY SSF50341 220 356 1.05E-14 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11485 242765337cb5a724b96c4e4d6f654d01 366 SMART SM00260 219 353 3.7E-4 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS11485 242765337cb5a724b96c4e4d6f654d01 366 PIRSF PIRSF020479 5 366 6.0E-151 T 22-04-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VPUCM_RS11485 242765337cb5a724b96c4e4d6f654d01 366 Pfam PF01584 CheW-like domain 223 355 1.0E-14 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VPUCM_RS03265 22d0639a5e0254214945d920c3117424 115 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.788 T 22-04-2016 IPR005346 RnfH protein VPUCM_RS03265 22d0639a5e0254214945d920c3117424 115 Gene3D G3DSA:3.10.20.280 2 92 8.8E-38 T 22-04-2016 IPR005346 RnfH protein VPUCM_RS03265 22d0639a5e0254214945d920c3117424 115 PANTHER PTHR37483:SF1 5 110 7.1E-45 T 22-04-2016 VPUCM_RS03265 22d0639a5e0254214945d920c3117424 115 SUPERFAMILY SSF54285 6 82 6.54E-26 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VPUCM_RS03265 22d0639a5e0254214945d920c3117424 115 PANTHER PTHR37483 5 110 7.1E-45 T 22-04-2016 VPUCM_RS03265 22d0639a5e0254214945d920c3117424 115 Pfam PF03658 RnfH family Ubiquitin 8 90 5.0E-34 T 22-04-2016 IPR005346 RnfH protein VPUCM_RS19910 1277ebd89fc409ae4bbc06eeeb2001b8 87 Gene3D G3DSA:2.60.260.20 2 74 2.6E-17 T 22-04-2016 VPUCM_RS19910 1277ebd89fc409ae4bbc06eeeb2001b8 87 Pfam PF01556 DnaJ C terminal domain 2 73 5.3E-14 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal VPUCM_RS19910 1277ebd89fc409ae4bbc06eeeb2001b8 87 SUPERFAMILY SSF49493 2 84 4.19E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VPUCM_RS12020 d80e251025ce7219935cfe24ef8bca32 541 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 16 538 1.1E-217 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG VPUCM_RS12020 d80e251025ce7219935cfe24ef8bca32 541 Pfam PF11658 Cellulose biosynthesis protein BcsG 18 535 6.0E-206 T 22-04-2016 IPR017744 Cellulose biosynthesis protein BcsG VPUCM_RS11360 0a19cb2c9b507d8f05a0bf9141ddb630 207 Pfam PF03458 UPF0126 domain 5 76 5.2E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VPUCM_RS11360 0a19cb2c9b507d8f05a0bf9141ddb630 207 Pfam PF03458 UPF0126 domain 92 163 1.7E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VPUCM_RS11360 0a19cb2c9b507d8f05a0bf9141ddb630 207 PANTHER PTHR30506:SF2 1 207 1.3E-120 T 22-04-2016 VPUCM_RS11360 0a19cb2c9b507d8f05a0bf9141ddb630 207 PANTHER PTHR30506 1 207 1.3E-120 T 22-04-2016 VPUCM_RS08995 55e70f95b4b5eefa5cc2740c2542b89e 519 Pfam PF00501 AMP-binding enzyme 10 391 3.8E-60 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS08995 55e70f95b4b5eefa5cc2740c2542b89e 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 22-04-2016 IPR020845 AMP-binding, conserved site VPUCM_RS08995 55e70f95b4b5eefa5cc2740c2542b89e 519 Gene3D G3DSA:2.30.38.10 329 381 1.6E-8 T 22-04-2016 VPUCM_RS08995 55e70f95b4b5eefa5cc2740c2542b89e 519 Gene3D G3DSA:3.40.50.980 165 328 3.0E-23 T 22-04-2016 VPUCM_RS08995 55e70f95b4b5eefa5cc2740c2542b89e 519 PANTHER PTHR24096 4 453 5.4E-72 T 22-04-2016 VPUCM_RS08995 55e70f95b4b5eefa5cc2740c2542b89e 519 SUPERFAMILY SSF56801 2 485 6.8E-87 T 22-04-2016 VPUCM_RS08995 55e70f95b4b5eefa5cc2740c2542b89e 519 Gene3D G3DSA:3.40.50.980 4 164 6.1E-25 T 22-04-2016 VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.795 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 Gene3D G3DSA:1.20.5.440 93 135 6.4E-23 T 22-04-2016 VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 SUPERFAMILY SSF46604 89 138 1.96E-14 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 8.8E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 8.0E-41 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 PANTHER PTHR13822 1 140 4.2E-46 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 5.2E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 SUPERFAMILY SSF51344 5 87 3.79E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 Gene3D G3DSA:2.60.15.10 5 92 2.6E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS16005 d4430f5877f40eb138da9c8be891b659 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 7.3E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VPUCM_RS10665 94a0d9f3abed4c351c60fe7b04685e80 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 20 156 1.5E-7 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VPUCM_RS10665 94a0d9f3abed4c351c60fe7b04685e80 202 SUPERFAMILY SSF103642 182 201 2.13E-7 T 22-04-2016 VPUCM_RS10665 94a0d9f3abed4c351c60fe7b04685e80 202 PANTHER PTHR33747:SF1 86 202 1.9E-17 T 22-04-2016 VPUCM_RS10665 94a0d9f3abed4c351c60fe7b04685e80 202 Pfam PF02810 SEC-C motif 184 202 1.5E-9 T 22-04-2016 IPR004027 SEC-C motif VPUCM_RS10665 94a0d9f3abed4c351c60fe7b04685e80 202 PANTHER PTHR33747 86 202 1.9E-17 T 22-04-2016 VPUCM_RS10665 94a0d9f3abed4c351c60fe7b04685e80 202 Gene3D G3DSA:3.10.450.50 172 202 2.9E-12 T 22-04-2016 IPR032710 NTF2-like domain VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 Pfam PF13633 Prokaryotic N-terminal methylation site 10 34 3.1E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 Gene3D G3DSA:3.30.700.10 12 76 1.1E-7 T 22-04-2016 VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 PANTHER PTHR30093:SF9 3 132 8.6E-42 T 22-04-2016 VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 PANTHER PTHR30093 3 132 8.6E-42 T 22-04-2016 VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.2E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 135 1.0E-43 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 SUPERFAMILY SSF54523 39 134 1.41E-31 T 22-04-2016 VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 2.1E-15 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 2.1E-15 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VPUCM_RS01140 8dc30205bf2e08f73b834d15c6b05252 136 Pfam PF08334 Type II secretion system (T2SS), protein G 35 133 3.3E-34 T 22-04-2016 IPR013545 Type II secretion system protein G VPUCM_RS02115 d5ee8f466d1dc26caef7374b3eccafbc 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.2E-38 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 VPUCM_RS02115 d5ee8f466d1dc26caef7374b3eccafbc 147 PANTHER PTHR38774:SF1 2 147 4.9E-52 T 22-04-2016 VPUCM_RS02115 d5ee8f466d1dc26caef7374b3eccafbc 147 PANTHER PTHR38774 2 147 4.9E-52 T 22-04-2016 VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 PANTHER PTHR33694:SF1 1 305 8.6E-143 T 22-04-2016 VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 PANTHER PTHR33694 1 305 8.6E-143 T 22-04-2016 VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 4.5E-143 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 SUPERFAMILY SSF54211 3 125 3.57E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 SUPERFAMILY SSF54211 134 278 7.05E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 50.009 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 Gene3D G3DSA:3.30.1700.10 129 283 7.7E-63 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.5E-109 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VPUCM_RS02285 eb8ab778ce474c16cfd2229135590577 305 Gene3D G3DSA:3.30.230.20 3 126 1.4E-46 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VPUCM_RS08710 0b897fec26ebee20487f960785fc3aac 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.6E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS08710 0b897fec26ebee20487f960785fc3aac 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.8E-31 T 22-04-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 VPUCM_RS08710 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.7E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS08710 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.7E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS08710 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.7E-25 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS08710 0b897fec26ebee20487f960785fc3aac 88 PANTHER PTHR34040 2 88 7.5E-37 T 22-04-2016 VPUCM_RS08710 0b897fec26ebee20487f960785fc3aac 88 PIRSF PIRSF004669 1 88 4.4E-26 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VPUCM_RS08710 0b897fec26ebee20487f960785fc3aac 88 PANTHER PTHR34040:SF3 2 88 7.5E-37 T 22-04-2016 VPUCM_RS13555 ddaedc9749786bda0156af5d6277c7b0 392 Gene3D G3DSA:3.80.30.20 7 242 1.7E-28 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VPUCM_RS13555 ddaedc9749786bda0156af5d6277c7b0 392 SUPERFAMILY SSF102114 4 386 1.02E-110 T 22-04-2016 VPUCM_RS13555 ddaedc9749786bda0156af5d6277c7b0 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 9.8E-137 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- VPUCM_RS13555 ddaedc9749786bda0156af5d6277c7b0 392 PANTHER PTHR13932 5 392 4.5E-221 T 22-04-2016 VPUCM_RS13555 ddaedc9749786bda0156af5d6277c7b0 392 SMART SM00729 6 227 1.1E-53 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VPUCM_RS13555 ddaedc9749786bda0156af5d6277c7b0 392 Pfam PF04055 Radical SAM superfamily 11 181 2.4E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS13555 ddaedc9749786bda0156af5d6277c7b0 392 PANTHER PTHR13932:SF7 5 392 4.5E-221 T 22-04-2016 VPUCM_RS13555 ddaedc9749786bda0156af5d6277c7b0 392 Pfam PF06969 HemN C-terminal domain 314 374 1.0E-8 T 22-04-2016 IPR010723 HemN, C-terminal VPUCM_RS10635 11aaed4f7fe982945b0b02885db9fc8b 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 VPUCM_RS10635 11aaed4f7fe982945b0b02885db9fc8b 358 SUPERFAMILY SSF52540 88 318 9.44E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10635 11aaed4f7fe982945b0b02885db9fc8b 358 Gene3D G3DSA:3.40.50.300 88 337 3.6E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10635 11aaed4f7fe982945b0b02885db9fc8b 358 PANTHER PTHR23264 1 354 9.0E-161 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VPUCM_RS10635 11aaed4f7fe982945b0b02885db9fc8b 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 2.0E-99 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VPUCM_RS10635 11aaed4f7fe982945b0b02885db9fc8b 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.564 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein VPUCM_RS10635 11aaed4f7fe982945b0b02885db9fc8b 358 PANTHER PTHR23264:SF19 1 354 9.0E-161 T 22-04-2016 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.1E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 SMART SM00228 374 447 4.8E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 SMART SM00228 267 349 1.9E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 Pfam PF13180 PDZ domain 268 358 3.4E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 SUPERFAMILY SSF50494 14 58 4.48E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 SUPERFAMILY SSF50494 89 276 4.48E-64 T 22-04-2016 IPR009003 Peptidase S1, PA clan VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 SUPERFAMILY SSF50156 379 454 1.58E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 4.6E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 Gene3D G3DSA:2.30.42.10 388 454 2.6E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 Gene3D G3DSA:2.30.42.10 270 362 4.8E-30 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 PANTHER PTHR22939:SF101 1 382 6.7E-201 T 22-04-2016 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 Gene3D G3DSA:2.40.10.10 156 269 4.4E-44 T 22-04-2016 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 4.0E-32 T 22-04-2016 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 PANTHER PTHR22939 1 382 6.7E-201 T 22-04-2016 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 1.8E-164 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 Gene3D G3DSA:2.40.10.10 37 155 7.8E-35 T 22-04-2016 VPUCM_RS02145 35a0d46ac2da01e53f4adeae7f20f675 455 SUPERFAMILY SSF50156 233 350 4.66E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS13105 c3a910029ce698d5892e12f6988f935c 199 Gene3D G3DSA:1.10.530.10 43 160 1.5E-7 T 22-04-2016 VPUCM_RS13105 c3a910029ce698d5892e12f6988f935c 199 SUPERFAMILY SSF53955 13 164 6.06E-22 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS14300 8382a69b55e00d778e6c5f2e6f9dc522 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 7.4E-46 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VPUCM_RS14300 8382a69b55e00d778e6c5f2e6f9dc522 139 PANTHER PTHR30615:SF5 1 139 5.3E-81 T 22-04-2016 VPUCM_RS14300 8382a69b55e00d778e6c5f2e6f9dc522 139 PANTHER PTHR30615 1 139 5.3E-81 T 22-04-2016 VPUCM_RS14300 8382a69b55e00d778e6c5f2e6f9dc522 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VPUCM_RS14300 8382a69b55e00d778e6c5f2e6f9dc522 139 PIRSF PIRSF004681 1 139 3.5E-47 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VPUCM_RS14300 8382a69b55e00d778e6c5f2e6f9dc522 139 Gene3D G3DSA:2.60.120.460 1 139 1.5E-59 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VPUCM_RS14300 8382a69b55e00d778e6c5f2e6f9dc522 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 6.5E-40 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VPUCM_RS14300 8382a69b55e00d778e6c5f2e6f9dc522 139 SUPERFAMILY SSF111038 1 139 2.22E-50 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VPUCM_RS00385 beb9db6d62e59eb80891ce2d2ca091a9 259 Gene3D G3DSA:3.40.1630.10 2 56 4.6E-27 T 22-04-2016 VPUCM_RS00385 beb9db6d62e59eb80891ce2d2ca091a9 259 PANTHER PTHR36112:SF1 16 259 3.9E-137 T 22-04-2016 VPUCM_RS00385 beb9db6d62e59eb80891ce2d2ca091a9 259 PANTHER PTHR36112 16 259 3.9E-137 T 22-04-2016 VPUCM_RS00385 beb9db6d62e59eb80891ce2d2ca091a9 259 SUPERFAMILY SSF53335 4 255 2.69E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00385 beb9db6d62e59eb80891ce2d2ca091a9 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 39.062 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VPUCM_RS00385 beb9db6d62e59eb80891ce2d2ca091a9 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 5.6E-107 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VPUCM_RS00385 beb9db6d62e59eb80891ce2d2ca091a9 259 Gene3D G3DSA:3.40.50.150 57 256 3.7E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF51055 383 426 1.07E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 Pfam PF01522 Polysaccharide deacetylase 23 126 1.2E-12 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 Pfam PF02839 Carbohydrate binding domain 333 375 2.0E-5 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 Gene3D G3DSA:2.10.10.20 383 426 1.8E-16 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 Gene3D G3DSA:2.10.10.20 335 377 3.5E-15 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF51055 334 377 1.83E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF88713 29 101 3.71E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF88713 192 336 3.71E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 SUPERFAMILY SSF88713 129 158 3.71E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 Gene3D G3DSA:3.20.20.370 166 334 1.7E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 Gene3D G3DSA:3.20.20.370 23 97 1.7E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 SMART SM00495 381 427 4.0 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS13735 ca47420ebb1c7a81be7625bbf206303b 427 SMART SM00495 332 378 6.7E-4 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 533 544 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 Gene3D G3DSA:3.40.50.720 122 208 7.2E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 Gene3D G3DSA:3.40.50.720 360 433 7.2E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 Gene3D G3DSA:1.10.1060.10 19 121 1.8E-23 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 Gene3D G3DSA:1.10.1060.10 446 546 1.2E-17 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 PANTHER PTHR11938:SF99 21 422 7.0E-77 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 PANTHER PTHR11938 21 422 7.0E-77 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 120 402 9.3E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 PRINTS PR00419 Adrenodoxin reductase family signature 143 156 9.6E-23 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 PRINTS PR00419 Adrenodoxin reductase family signature 286 299 9.6E-23 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 PRINTS PR00419 Adrenodoxin reductase family signature 120 142 9.6E-23 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 PRINTS PR00419 Adrenodoxin reductase family signature 185 195 9.6E-23 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 PRINTS PR00419 Adrenodoxin reductase family signature 252 266 9.6E-23 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 Gene3D G3DSA:3.50.50.60 209 359 2.0E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 SUPERFAMILY SSF46548 408 552 1.7E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 SUPERFAMILY SSF46548 15 129 6.28E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 SUPERFAMILY SSF51971 117 360 3.83E-62 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 Pfam PF13534 4Fe-4S dicluster domain 489 547 1.6E-5 T 22-04-2016 VPUCM_RS10030 dfdd95a9067e30c06033c16d72ca246f 598 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 19 106 2.3E-18 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VPUCM_RS01975 efa9ee88176ea812d7ef940dfec988c5 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 5.0E-17 T 22-04-2016 IPR007497 Protein of unknown function DUF541 VPUCM_RS01975 efa9ee88176ea812d7ef940dfec988c5 239 PIRSF PIRSF029033 1 239 1.1E-109 T 22-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 Gene3D G3DSA:2.40.50.100 76 152 8.5E-34 T 22-04-2016 VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 2.0E-62 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 PANTHER PTHR23151 1 152 1.3E-54 T 22-04-2016 VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 Pfam PF00364 Biotin-requiring enzyme 77 151 4.2E-26 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 SUPERFAMILY SSF51230 77 152 6.81E-27 T 22-04-2016 IPR011053 Single hybrid motif VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 5.3E-19 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 5.3E-19 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 5.3E-19 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VPUCM_RS15065 317e6481b55b0cbb0b9298e1deeafe88 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 22-04-2016 IPR001882 Biotin-binding site VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 SUPERFAMILY SSF55816 370 548 7.19E-41 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 Gene3D G3DSA:3.90.780.10 370 547 8.5E-43 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 Pfam PF02872 5'-nucleotidase, C-terminal domain 372 519 5.9E-30 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 SUPERFAMILY SSF56300 34 367 1.5E-90 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 PANTHER PTHR11575 36 549 4.0E-179 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 Gene3D G3DSA:3.60.21.10 35 367 1.9E-92 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 217 234 1.72E-44 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 494 513 1.72E-44 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 293 313 1.72E-44 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 425 448 1.72E-44 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 37 55 1.72E-44 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 248 271 1.72E-44 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 PANTHER PTHR11575:SF27 36 549 4.0E-179 T 22-04-2016 VPUCM_RS09985 561ce8f35e4c218af51ad837e9df25dc 571 Pfam PF00149 Calcineurin-like phosphoesterase 39 265 1.5E-17 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VPUCM_RS12495 29f9ffc63867a72288d109d8c45c7a17 156 PANTHER PTHR33603:SF1 1 155 6.4E-73 T 22-04-2016 VPUCM_RS12495 29f9ffc63867a72288d109d8c45c7a17 156 Gene3D G3DSA:3.40.1280.10 2 155 2.2E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VPUCM_RS12495 29f9ffc63867a72288d109d8c45c7a17 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 5.4E-78 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS12495 29f9ffc63867a72288d109d8c45c7a17 156 PANTHER PTHR33603 1 155 6.4E-73 T 22-04-2016 VPUCM_RS12495 29f9ffc63867a72288d109d8c45c7a17 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 6.3E-49 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS12495 29f9ffc63867a72288d109d8c45c7a17 156 SUPERFAMILY SSF75217 1 154 2.04E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VPUCM_RS12495 29f9ffc63867a72288d109d8c45c7a17 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.687 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS12495 29f9ffc63867a72288d109d8c45c7a17 156 PIRSF PIRSF004505 1 155 6.9E-44 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS02910 12fe0e25b22cb37c8b493023b4369d19 377 PANTHER PTHR21148:SF26 1 370 3.8E-188 T 22-04-2016 VPUCM_RS02910 12fe0e25b22cb37c8b493023b4369d19 377 Gene3D G3DSA:3.20.20.105 2 368 2.7E-171 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS02910 12fe0e25b22cb37c8b493023b4369d19 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 370 1.1E-186 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS02910 12fe0e25b22cb37c8b493023b4369d19 377 SUPERFAMILY SSF51713 3 366 3.66E-164 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS02910 12fe0e25b22cb37c8b493023b4369d19 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 4.2E-178 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS02910 12fe0e25b22cb37c8b493023b4369d19 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 361 58.126 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS02910 12fe0e25b22cb37c8b493023b4369d19 377 PANTHER PTHR21148 1 370 3.8E-188 T 22-04-2016 VPUCM_RS02910 12fe0e25b22cb37c8b493023b4369d19 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 2.8E-97 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.5E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.001 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 SUPERFAMILY SSF54211 1 181 3.44E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 Gene3D G3DSA:3.30.230.70 7 237 3.4E-36 T 22-04-2016 IPR027408 PNPase/RNase PH domain VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 PANTHER PTHR11953:SF0 1 238 6.3E-86 T 22-04-2016 VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 SUPERFAMILY SSF55666 153 236 3.01E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.0E-111 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 2.0E-10 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VPUCM_RS00915 c72d4990e2cf36802e1fbe2ea44d48bb 238 PANTHER PTHR11953 1 238 6.3E-86 T 22-04-2016 VPUCM_RS00485 3e252a850830c48f5e0c2bb85c9605c0 302 PANTHER PTHR22911 1 288 7.5E-161 T 22-04-2016 VPUCM_RS00485 3e252a850830c48f5e0c2bb85c9605c0 302 SUPERFAMILY SSF103481 189 289 4.05E-10 T 22-04-2016 VPUCM_RS00485 3e252a850830c48f5e0c2bb85c9605c0 302 Pfam PF00892 EamA-like transporter family 155 286 5.1E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS00485 3e252a850830c48f5e0c2bb85c9605c0 302 Pfam PF00892 EamA-like transporter family 9 141 6.5E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS00485 3e252a850830c48f5e0c2bb85c9605c0 302 PANTHER PTHR22911:SF58 1 288 7.5E-161 T 22-04-2016 VPUCM_RS00485 3e252a850830c48f5e0c2bb85c9605c0 302 SUPERFAMILY SSF103481 65 144 1.16E-11 T 22-04-2016 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 PANTHER PTHR40942:SF1 1 137 2.0E-59 T 22-04-2016 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 Gene3D G3DSA:1.10.760.10 58 134 5.4E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 3.8E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 3.8E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 3.8E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 3.8E-14 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 SUPERFAMILY SSF46626 60 134 8.33E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 2.5E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS00220 4c5d8632664967d43009b7baa775eafd 137 PANTHER PTHR40942 1 137 2.0E-59 T 22-04-2016 VPUCM_RS11160 6cfe9d5a24ad782a46f0a1651b00ef05 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 38 323 1.5E-67 T 22-04-2016 IPR033462 Cache 3/Cache 2 fusion domain VPUCM_RS11160 6cfe9d5a24ad782a46f0a1651b00ef05 678 PANTHER PTHR32089 2 677 4.5E-117 T 22-04-2016 VPUCM_RS11160 6cfe9d5a24ad782a46f0a1651b00ef05 678 Gene3D G3DSA:1.10.287.950 432 647 1.6E-51 T 22-04-2016 VPUCM_RS11160 6cfe9d5a24ad782a46f0a1651b00ef05 678 SUPERFAMILY SSF58104 378 677 4.32E-63 T 22-04-2016 VPUCM_RS11160 6cfe9d5a24ad782a46f0a1651b00ef05 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 485 677 8.8E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS11160 6cfe9d5a24ad782a46f0a1651b00ef05 678 SUPERFAMILY SSF103190 115 212 3.65E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VPUCM_RS11160 6cfe9d5a24ad782a46f0a1651b00ef05 678 SMART SM00283 417 678 1.4E-66 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS11160 6cfe9d5a24ad782a46f0a1651b00ef05 678 Gene3D G3DSA:3.30.450.20 172 323 8.2E-18 T 22-04-2016 VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 PANTHER PTHR11550 1 536 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 Gene3D G3DSA:3.40.50.300 1 280 1.1E-132 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.0E-124 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.1E-62 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.318 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 SUPERFAMILY SSF52317 289 539 2.75E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 SUPERFAMILY SSF52540 3 269 2.13E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 6.6E-260 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VPUCM_RS13275 9112685dc6fdcceead3f82a419a65655 546 Gene3D G3DSA:3.40.50.880 288 539 2.0E-98 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS11715 12a44dac49b3b54c7ffa24125afeed2c 180 PIRSF PIRSF028103 1 178 2.4E-70 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VPUCM_RS11715 12a44dac49b3b54c7ffa24125afeed2c 180 Gene3D G3DSA:3.30.70.260 88 178 5.5E-38 T 22-04-2016 VPUCM_RS11715 12a44dac49b3b54c7ffa24125afeed2c 180 PANTHER PTHR34875:SF3 1 179 9.9E-59 T 22-04-2016 VPUCM_RS11715 12a44dac49b3b54c7ffa24125afeed2c 180 SUPERFAMILY SSF55021 1 82 2.14E-18 T 22-04-2016 VPUCM_RS11715 12a44dac49b3b54c7ffa24125afeed2c 180 Gene3D G3DSA:3.30.70.260 1 83 9.6E-28 T 22-04-2016 VPUCM_RS11715 12a44dac49b3b54c7ffa24125afeed2c 180 Pfam PF13740 ACT domain 3 78 1.4E-23 T 22-04-2016 VPUCM_RS11715 12a44dac49b3b54c7ffa24125afeed2c 180 SUPERFAMILY SSF55021 90 176 1.07E-21 T 22-04-2016 VPUCM_RS11715 12a44dac49b3b54c7ffa24125afeed2c 180 PANTHER PTHR34875 1 179 9.9E-59 T 22-04-2016 VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 6.1E-53 T 22-04-2016 IPR012660 Thioesterase, putative VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 SUPERFAMILY SSF55729 2 157 8.68E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 PANTHER PTHR13355:SF8 4 160 1.6E-71 T 22-04-2016 VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 SUPERFAMILY SSF54637 154 296 2.95E-40 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 Pfam PF00583 Acetyltransferase (GNAT) family 53 123 2.7E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 Gene3D G3DSA:3.10.129.10 145 297 2.0E-65 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 1.4E-45 T 22-04-2016 IPR012660 Thioesterase, putative VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 Gene3D G3DSA:3.40.630.30 5 144 7.9E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS00635 4a8cf08d817675a862fcc3a966f69db4 305 PANTHER PTHR13355 4 160 1.6E-71 T 22-04-2016 VPUCM_RS09695 8efb04835f24e8c4ee05f36f476a3363 325 Gene3D G3DSA:1.20.1000.10 127 261 5.1E-4 T 22-04-2016 VPUCM_RS09695 8efb04835f24e8c4ee05f36f476a3363 325 Gene3D G3DSA:1.10.287.110 267 324 3.9E-14 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS09695 8efb04835f24e8c4ee05f36f476a3363 325 SUPERFAMILY SSF81901 51 144 6.93E-9 T 22-04-2016 VPUCM_RS09695 8efb04835f24e8c4ee05f36f476a3363 325 SUPERFAMILY SSF46565 269 322 4.84E-13 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS09695 8efb04835f24e8c4ee05f36f476a3363 325 Gene3D G3DSA:1.25.40.10 29 126 1.2E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 Gene3D G3DSA:1.20.1280.20 81 170 2.6E-31 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 4.4E-41 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 SUPERFAMILY SSF47144 78 170 7.06E-25 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 PANTHER PTHR14021 1 163 2.2E-54 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 SMART SM00271 1 66 4.2E-8 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 Pfam PF00226 DnaJ domain 2 70 1.1E-6 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 2.6E-19 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.004 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 Gene3D G3DSA:1.10.287.110 1 72 7.9E-26 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 PANTHER PTHR14021:SF15 1 163 2.2E-54 T 22-04-2016 VPUCM_RS02960 becdfad9054859a54f7b330687cfebee 171 SUPERFAMILY SSF46565 1 72 1.83E-16 T 22-04-2016 IPR001623 DnaJ domain VPUCM_RS12975 eb88ad8db514a065418b3ce47b439fa6 305 Gene3D G3DSA:3.40.50.300 3 226 1.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12975 eb88ad8db514a065418b3ce47b439fa6 305 PANTHER PTHR24220 5 302 2.0E-174 T 22-04-2016 VPUCM_RS12975 eb88ad8db514a065418b3ce47b439fa6 305 Pfam PF00005 ABC transporter 20 164 6.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS12975 eb88ad8db514a065418b3ce47b439fa6 305 SMART SM00382 29 213 2.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS12975 eb88ad8db514a065418b3ce47b439fa6 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS12975 eb88ad8db514a065418b3ce47b439fa6 305 PANTHER PTHR24220:SF305 5 302 2.0E-174 T 22-04-2016 VPUCM_RS12975 eb88ad8db514a065418b3ce47b439fa6 305 SUPERFAMILY SSF52540 3 231 1.78E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 SUPERFAMILY SSF54106 345 388 7.06E-11 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 SMART SM00257 476 520 1.8E-9 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 SMART SM00257 419 463 6.1E-13 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 SMART SM00257 345 388 3.6E-14 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 Pfam PF01464 Transglycosylase SLT domain 127 228 8.3E-23 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 SUPERFAMILY SSF54106 419 463 7.46E-11 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 SUPERFAMILY SSF53955 114 271 8.72E-42 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 Gene3D G3DSA:1.10.530.10 110 273 3.4E-45 T 22-04-2016 VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 Gene3D G3DSA:3.10.350.10 474 520 8.0E-16 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 Gene3D G3DSA:3.10.350.10 419 464 1.2E-16 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 Gene3D G3DSA:3.10.350.10 344 389 1.5E-16 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 PANTHER PTHR21666 65 502 7.6E-193 T 22-04-2016 VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 PANTHER PTHR21666:SF203 65 502 7.6E-193 T 22-04-2016 VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 Pfam PF01476 LysM domain 346 388 2.1E-12 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 Pfam PF01476 LysM domain 477 518 4.2E-10 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 Pfam PF01476 LysM domain 420 462 5.9E-11 T 22-04-2016 IPR018392 LysM domain VPUCM_RS04740 f9b294725ca11c00bda408b564d958d2 528 SUPERFAMILY SSF54106 474 521 7.72E-10 T 22-04-2016 IPR018392 LysM domain VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 PANTHER PTHR13789:SF214 1 392 1.8E-166 T 22-04-2016 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 SUPERFAMILY SSF51905 268 382 1.12E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 SUPERFAMILY SSF51905 3 178 1.12E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.6E-10 T 22-04-2016 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.6E-10 T 22-04-2016 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.6E-10 T 22-04-2016 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.6E-10 T 22-04-2016 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 Pfam PF01494 FAD binding domain 4 337 1.0E-22 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 Gene3D G3DSA:3.50.50.60 279 318 2.9E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 Gene3D G3DSA:3.50.50.60 1 181 2.9E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 6.9E-120 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 2.8E-144 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VPUCM_RS13385 dee0847cfcfaaf014039fe708bf164f5 392 PANTHER PTHR13789 1 392 1.8E-166 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 SMART SM00487 150 342 3.8E-15 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 SUPERFAMILY SSF52540 130 378 1.36E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 SUPERFAMILY SSF52540 482 649 2.59E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 SUPERFAMILY SSF52540 273 337 2.59E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 5.0E-16 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 6.2E-149 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 SMART SM00490 519 603 2.7E-17 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 8.3E-15 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799 800 841 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799 150 354 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799 874 950 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799 1 9 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799 402 695 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799:SF610 800 841 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799:SF610 150 354 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799:SF610 874 950 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799:SF610 1 9 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 PANTHER PTHR10799:SF610 402 695 2.4E-250 T 22-04-2016 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 71.849 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 Gene3D G3DSA:3.40.50.300 486 606 1.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14030 c71e051df3e89a88f74dcf3a65b0ef49 969 Gene3D G3DSA:3.40.50.300 164 318 1.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 Gene3D G3DSA:3.40.50.300 1 205 4.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 4.5E-17 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 PANTHER PTHR11059 2 554 2.1E-181 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 SUPERFAMILY SSF52540 1 199 2.99E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 SUPERFAMILY SSF52540 287 322 2.99E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 SUPERFAMILY SSF52540 351 513 2.99E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 Gene3D G3DSA:3.40.50.300 366 385 2.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 Gene3D G3DSA:3.40.50.300 431 505 2.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 2.1E-173 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VPUCM_RS03275 0dfb1fbd586c64a76a203d604a33459c 554 PIRSF PIRSF003128 1 554 6.2E-162 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.4E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 Gene3D G3DSA:1.10.1740.10 313 399 3.6E-28 T 22-04-2016 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 SUPERFAMILY SSF55347 126 274 2.78E-62 T 22-04-2016 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 395 5.9E-161 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 PANTHER PTHR30525 1 401 1.6E-214 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 PIRSF PIRSF006205 1 401 3.9E-150 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.8E-45 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 Gene3D G3DSA:3.40.50.720 1 150 1.9E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 SUPERFAMILY SSF51735 2 150 4.26E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.1E-38 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.533 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS04660 2f76ca964dbc02c8498839a2532a7a80 401 SUPERFAMILY SSF69055 302 399 1.14E-29 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS07320 fb7dd1e7f3faf0e41bf1ec9f2391142a 138 Pfam PF13737 Transposase DDE domain 19 129 5.9E-46 T 22-04-2016 IPR025668 Transposase DDE domain VPUCM_RS07320 fb7dd1e7f3faf0e41bf1ec9f2391142a 138 PANTHER PTHR34631 3 138 2.1E-81 T 22-04-2016 VPUCM_RS07320 fb7dd1e7f3faf0e41bf1ec9f2391142a 138 PANTHER PTHR34631:SF2 3 138 2.1E-81 T 22-04-2016 VPUCM_RS02590 3dc0476756d33b1c6e22dc315deab4f3 296 Gene3D G3DSA:1.10.10.10 3 81 2.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02590 3dc0476756d33b1c6e22dc315deab4f3 296 Pfam PF03466 LysR substrate binding domain 96 288 6.2E-13 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS02590 3dc0476756d33b1c6e22dc315deab4f3 296 SUPERFAMILY SSF46785 2 85 1.03E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02590 3dc0476756d33b1c6e22dc315deab4f3 296 PANTHER PTHR30293 2 296 5.3E-193 T 22-04-2016 VPUCM_RS02590 3dc0476756d33b1c6e22dc315deab4f3 296 SUPERFAMILY SSF53850 90 288 7.19E-26 T 22-04-2016 VPUCM_RS02590 3dc0476756d33b1c6e22dc315deab4f3 296 PANTHER PTHR30293:SF2 2 296 5.3E-193 T 22-04-2016 VPUCM_RS02590 3dc0476756d33b1c6e22dc315deab4f3 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS02590 3dc0476756d33b1c6e22dc315deab4f3 296 Gene3D G3DSA:3.40.190.10 97 228 2.5E-8 T 22-04-2016 VPUCM_RS03965 677bb721454032bde17509db1787c596 169 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1 159 2.2E-46 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03965 677bb721454032bde17509db1787c596 169 PANTHER PTHR10799:SF750 37 157 2.4E-26 T 22-04-2016 VPUCM_RS03965 677bb721454032bde17509db1787c596 169 SUPERFAMILY SSF55073 5 159 2.2E-45 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS03965 677bb721454032bde17509db1787c596 169 PANTHER PTHR10799 37 157 2.4E-26 T 22-04-2016 VPUCM_RS03965 677bb721454032bde17509db1787c596 169 SMART SM00267 1 160 1.5E-44 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03965 677bb721454032bde17509db1787c596 169 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 156 1.2E-44 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS03965 677bb721454032bde17509db1787c596 169 Gene3D G3DSA:3.30.70.270 2 159 1.7E-50 T 22-04-2016 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 Gene3D G3DSA:3.80.30.20 147 377 3.0E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF04055 Radical SAM superfamily 151 325 1.2E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 8.1E-201 T 22-04-2016 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 PANTHER PTHR11918:SF43 1 474 2.4E-232 T 22-04-2016 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.7E-30 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 SUPERFAMILY SSF102114 122 374 1.03E-61 T 22-04-2016 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 6.3E-154 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF01938 TRAM domain 379 440 3.5E-18 T 22-04-2016 IPR002792 TRAM domain VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.25 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 SMART SM00729 147 367 3.0E-63 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VPUCM_RS12445 bcea0f56ee7ebcdeeb20919e8ba29373 474 PANTHER PTHR11918 1 474 2.4E-232 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 7.8E-71 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 PANTHER PTHR30587 4 216 1.4E-133 T 22-04-2016 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 Pfam PF00813 FliP family 14 211 2.3E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 8.3E-92 T 22-04-2016 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VPUCM_RS08705 92aec7af3383600929b50355a563740c 216 PANTHER PTHR30587:SF2 4 216 1.4E-133 T 22-04-2016 VPUCM_RS08350 2003349d93b0c6c3d7941a414020172e 180 Pfam PF07126 Cell-division protein ZapC 1 168 1.4E-65 T 22-04-2016 IPR009809 Cell division protein ZapC VPUCM_RS08350 2003349d93b0c6c3d7941a414020172e 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 36.056 T 22-04-2016 IPR009809 Cell division protein ZapC VPUCM_RS08350 2003349d93b0c6c3d7941a414020172e 180 PIRSF PIRSF010252 1 178 2.6E-72 T 22-04-2016 IPR009809 Cell division protein ZapC VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 PANTHER PTHR22617:SF34 62 319 1.3E-14 T 22-04-2016 VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 39 313 9.7E-73 T 22-04-2016 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 Gene3D G3DSA:2.30.330.10 234 316 5.1E-23 T 22-04-2016 VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 290 307 1.62E-7 T 22-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 184 194 1.62E-7 T 22-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 246 258 1.62E-7 T 22-04-2016 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 SUPERFAMILY SSF101801 160 219 1.96E-7 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 SUPERFAMILY SSF101801 242 317 8.11E-20 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 246 313 1.3E-20 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VPUCM_RS08700 173a22a2781c1825da9671bb879db1a3 321 PANTHER PTHR22617 62 319 1.3E-14 T 22-04-2016 VPUCM_RS04245 8746a91a1c19e7882da9b86879456c61 543 PANTHER PTHR11819:SF7 9 501 2.5E-149 T 22-04-2016 VPUCM_RS04245 8746a91a1c19e7882da9b86879456c61 543 PANTHER PTHR11819 9 501 2.5E-149 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS04245 8746a91a1c19e7882da9b86879456c61 543 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 159 184 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 VPUCM_RS04245 8746a91a1c19e7882da9b86879456c61 543 Pfam PF00474 Sodium:solute symporter family 44 461 8.7E-72 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS04245 8746a91a1c19e7882da9b86879456c61 543 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 44 463 2.3E-133 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS12275 3d563b8f5dae794025d1e6989cfc2357 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 6.2E-116 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VPUCM_RS12275 3d563b8f5dae794025d1e6989cfc2357 283 Pfam PF00793 DAHP synthetase I family 10 275 9.8E-70 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VPUCM_RS12275 3d563b8f5dae794025d1e6989cfc2357 283 PANTHER PTHR21057:SF6 1 283 6.3E-223 T 22-04-2016 VPUCM_RS12275 3d563b8f5dae794025d1e6989cfc2357 283 PANTHER PTHR21057 1 283 6.3E-223 T 22-04-2016 VPUCM_RS12275 3d563b8f5dae794025d1e6989cfc2357 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.166 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VPUCM_RS12275 3d563b8f5dae794025d1e6989cfc2357 283 Gene3D G3DSA:3.20.20.70 16 279 6.3E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS12275 3d563b8f5dae794025d1e6989cfc2357 283 SUPERFAMILY SSF51569 2 278 3.57E-104 T 22-04-2016 VPUCM_RS13395 adac311cb78ac87d8abc2de1e4a3ee5a 102 SUPERFAMILY SSF102829 6 95 3.01E-24 T 22-04-2016 IPR007838 Cell division protein ZapA-like VPUCM_RS13395 adac311cb78ac87d8abc2de1e4a3ee5a 102 Pfam PF05164 Cell division protein ZapA 6 89 7.0E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like VPUCM_RS13395 adac311cb78ac87d8abc2de1e4a3ee5a 102 PANTHER PTHR34981 2 94 3.6E-23 T 22-04-2016 VPUCM_RS13395 adac311cb78ac87d8abc2de1e4a3ee5a 102 PANTHER PTHR34981:SF1 2 94 3.6E-23 T 22-04-2016 VPUCM_RS24225 c3d6a15475f56fd1dd39be239fe6f992 75 PANTHER PTHR38146:SF2 5 69 2.4E-18 T 22-04-2016 VPUCM_RS24225 c3d6a15475f56fd1dd39be239fe6f992 75 PANTHER PTHR38146 5 69 2.4E-18 T 22-04-2016 VPUCM_RS10980 e288927910891d0203033d57f6e27cc8 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 2.1E-65 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS10980 e288927910891d0203033d57f6e27cc8 230 PANTHER PTHR30586:SF0 1 220 3.3E-140 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VPUCM_RS10980 e288927910891d0203033d57f6e27cc8 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 7.7E-89 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VPUCM_RS10980 e288927910891d0203033d57f6e27cc8 230 PIRSF PIRSF006102 1 220 8.3E-78 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS10980 e288927910891d0203033d57f6e27cc8 230 PANTHER PTHR30586 1 220 3.3E-140 T 22-04-2016 VPUCM_RS10980 e288927910891d0203033d57f6e27cc8 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.166 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VPUCM_RS05705 f28323e0e9ed38da143f27ba3e188e3c 424 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 3.2E-64 T 22-04-2016 IPR025105 Domain of unknown function DUF4010 VPUCM_RS05705 f28323e0e9ed38da143f27ba3e188e3c 424 Pfam PF02308 MgtC family 16 141 4.8E-19 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VPUCM_RS05705 f28323e0e9ed38da143f27ba3e188e3c 424 PANTHER PTHR39084 12 424 2.1E-62 T 22-04-2016 VPUCM_RS01640 a15f7b5d3e6926d0e2fc0bbc725fddc0 242 Pfam PF00005 ABC transporter 30 185 1.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS01640 a15f7b5d3e6926d0e2fc0bbc725fddc0 242 PANTHER PTHR24220 10 229 5.9E-75 T 22-04-2016 VPUCM_RS01640 a15f7b5d3e6926d0e2fc0bbc725fddc0 242 PANTHER PTHR24220:SF578 10 229 5.9E-75 T 22-04-2016 VPUCM_RS01640 a15f7b5d3e6926d0e2fc0bbc725fddc0 242 Gene3D G3DSA:3.40.50.300 8 228 1.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01640 a15f7b5d3e6926d0e2fc0bbc725fddc0 242 SUPERFAMILY SSF52540 8 229 3.84E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01640 a15f7b5d3e6926d0e2fc0bbc725fddc0 242 SMART SM00382 35 233 3.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS13800 e9c06b87a7d11875005bc90eff05a4f2 366 PANTHER PTHR33529:SF2 2 366 1.0E-116 T 22-04-2016 VPUCM_RS13800 e9c06b87a7d11875005bc90eff05a4f2 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 2.7E-70 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VPUCM_RS13800 e9c06b87a7d11875005bc90eff05a4f2 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 1.6E-117 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VPUCM_RS13800 e9c06b87a7d11875005bc90eff05a4f2 366 PANTHER PTHR33529 2 366 1.0E-116 T 22-04-2016 VPUCM_RS05905 70dbf36f2224e184d96963bececded91 379 PANTHER PTHR30158 2 378 2.0E-153 T 22-04-2016 VPUCM_RS05905 70dbf36f2224e184d96963bececded91 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 291 8.0E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VPUCM_RS05905 70dbf36f2224e184d96963bececded91 379 SUPERFAMILY SSF111369 51 297 3.4E-81 T 22-04-2016 VPUCM_RS05905 70dbf36f2224e184d96963bececded91 379 PANTHER PTHR30158:SF3 2 378 2.0E-153 T 22-04-2016 VPUCM_RS05905 70dbf36f2224e184d96963bececded91 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 373 2.6E-84 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VPUCM_RS05905 70dbf36f2224e184d96963bececded91 379 Gene3D G3DSA:2.40.50.100 64 97 8.1E-24 T 22-04-2016 VPUCM_RS05905 70dbf36f2224e184d96963bececded91 379 Gene3D G3DSA:2.40.50.100 172 206 8.1E-24 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 SUPERFAMILY SSF53067 6 209 5.55E-30 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 Gene3D G3DSA:3.30.420.40 228 335 1.8E-16 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PANTHER PTHR19375:SF226 44 69 3.6E-91 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PANTHER PTHR19375:SF226 85 282 3.6E-91 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PANTHER PTHR19375:SF226 6 23 3.6E-91 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 2.9E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 2.9E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 2.9E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PRINTS PR00301 70kDa heat shock protein signature 398 418 2.9E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 Pfam PF00012 Hsp70 protein 83 315 1.5E-16 T 22-04-2016 IPR013126 Heat shock protein 70 family VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 Pfam PF12531 DNA-K related protein 685 932 4.9E-101 T 22-04-2016 IPR021030 Protein of unknown function DUF3731 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 Gene3D G3DSA:3.30.420.40 6 227 4.3E-35 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PANTHER PTHR19375 44 69 3.6E-91 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PANTHER PTHR19375 85 282 3.6E-91 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 PANTHER PTHR19375 6 23 3.6E-91 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 SUPERFAMILY SSF53067 403 456 1.23E-21 T 22-04-2016 VPUCM_RS07790 7f9248866674c47a24193a772c2be646 935 SUPERFAMILY SSF53067 223 369 1.23E-21 T 22-04-2016 VPUCM_RS14890 552a227d96a7d7efba79b7b698a5c63a 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 7.0E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VPUCM_RS14890 552a227d96a7d7efba79b7b698a5c63a 125 SUPERFAMILY SSF81343 7 125 4.36E-51 T 22-04-2016 VPUCM_RS14890 552a227d96a7d7efba79b7b698a5c63a 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.893 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VPUCM_RS14890 552a227d96a7d7efba79b7b698a5c63a 125 Pfam PF02313 Fumarate reductase subunit D 11 123 4.1E-44 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VPUCM_RS14890 552a227d96a7d7efba79b7b698a5c63a 125 Gene3D G3DSA:1.20.1300.10 7 125 5.7E-53 T 22-04-2016 VPUCM_RS14890 552a227d96a7d7efba79b7b698a5c63a 125 PIRSF PIRSF000179 6 125 7.3E-56 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VPUCM_RS13520 f8f9fdca1fafe81f487e5f1615a7f662 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS13520 f8f9fdca1fafe81f487e5f1615a7f662 346 PANTHER PTHR30486 1 338 4.3E-195 T 22-04-2016 VPUCM_RS13520 f8f9fdca1fafe81f487e5f1615a7f662 346 SUPERFAMILY SSF52540 5 335 4.29E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13520 f8f9fdca1fafe81f487e5f1615a7f662 346 PANTHER PTHR30486:SF6 1 338 4.3E-195 T 22-04-2016 VPUCM_RS13520 f8f9fdca1fafe81f487e5f1615a7f662 346 Pfam PF00437 Type II/IV secretion system protein 12 270 4.0E-47 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VPUCM_RS13520 f8f9fdca1fafe81f487e5f1615a7f662 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 6.1E-153 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VPUCM_RS13520 f8f9fdca1fafe81f487e5f1615a7f662 346 Gene3D G3DSA:3.40.50.300 100 338 4.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01035 ad22a04e9be26883106de88d0084195c 392 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 374 1.6E-92 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VPUCM_RS01035 ad22a04e9be26883106de88d0084195c 392 Gene3D G3DSA:3.40.50.2000 2 211 3.7E-49 T 22-04-2016 VPUCM_RS01035 ad22a04e9be26883106de88d0084195c 392 Gene3D G3DSA:3.40.50.2000 212 374 5.3E-12 T 22-04-2016 VPUCM_RS01035 ad22a04e9be26883106de88d0084195c 392 SUPERFAMILY SSF53756 5 376 2.7E-95 T 22-04-2016 VPUCM_RS01035 ad22a04e9be26883106de88d0084195c 392 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 6 373 7.8E-145 T 22-04-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 PANTHER PTHR21015:SF22 6 355 4.6E-129 T 22-04-2016 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 SUPERFAMILY SSF53756 5 352 1.68E-127 T 22-04-2016 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 PANTHER PTHR21015 6 355 4.6E-129 T 22-04-2016 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.808 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 Gene3D G3DSA:3.40.50.2000 253 334 5.6E-7 T 22-04-2016 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 2.1E-47 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 5.7E-118 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 Gene3D G3DSA:3.40.50.2000 1 195 4.0E-76 T 22-04-2016 VPUCM_RS02260 8ad8ec0b7fbe298ba56a64d3cefe2df6 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 2.6E-34 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS13415 c2b9d72f2bb029500cc147cb0e3f0c27 230 PANTHER PTHR34387 7 230 1.1E-53 T 22-04-2016 VPUCM_RS13415 c2b9d72f2bb029500cc147cb0e3f0c27 230 Pfam PF04402 Protein of unknown function (DUF541) 29 227 4.6E-41 T 22-04-2016 IPR007497 Protein of unknown function DUF541 VPUCM_RS13415 c2b9d72f2bb029500cc147cb0e3f0c27 230 PANTHER PTHR34387:SF1 7 230 1.1E-53 T 22-04-2016 VPUCM_RS05010 6f6d01ff064bc75815a2327fd80df425 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 2.4E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS05010 6f6d01ff064bc75815a2327fd80df425 85 Gene3D G3DSA:1.10.1200.10 4 83 8.3E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS05010 6f6d01ff064bc75815a2327fd80df425 85 SUPERFAMILY SSF47336 4 83 8.24E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS05010 6f6d01ff064bc75815a2327fd80df425 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 13.792 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VPUCM_RS14860 7fa0611dbdedd6c8533eec8efbe97614 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS14860 7fa0611dbdedd6c8533eec8efbe97614 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS14860 7fa0611dbdedd6c8533eec8efbe97614 211 PANTHER PTHR30055:SF30 1 194 7.8E-58 T 22-04-2016 VPUCM_RS14860 7fa0611dbdedd6c8533eec8efbe97614 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 1.5E-43 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR VPUCM_RS14860 7fa0611dbdedd6c8533eec8efbe97614 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.4E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS14860 7fa0611dbdedd6c8533eec8efbe97614 211 PANTHER PTHR30055 1 194 7.8E-58 T 22-04-2016 VPUCM_RS14860 7fa0611dbdedd6c8533eec8efbe97614 211 Gene3D G3DSA:1.10.357.10 2 181 4.8E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VPUCM_RS14860 7fa0611dbdedd6c8533eec8efbe97614 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 SUPERFAMILY SSF52172 8 122 1.02E-29 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 SMART SM00421 139 196 1.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 PANTHER PTHR26402 8 192 2.0E-67 T 22-04-2016 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 1.0E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 SUPERFAMILY SSF46894 129 197 6.46E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 SMART SM00448 8 119 3.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 Gene3D G3DSA:1.10.10.10 144 196 2.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 PANTHER PTHR26402:SF599 8 192 2.0E-67 T 22-04-2016 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 Gene3D G3DSA:3.40.50.2300 7 143 4.6E-30 T 22-04-2016 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 Pfam PF00072 Response regulator receiver domain 10 119 9.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS10350 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 SUPERFAMILY SSF117143 93 223 6.67E-35 T 22-04-2016 VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 PANTHER PTHR30435:SF19 1 262 1.4E-134 T 22-04-2016 VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.5E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 8.0E-118 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 PANTHER PTHR30435 1 262 1.4E-134 T 22-04-2016 VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 8.9E-24 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.6E-30 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VPUCM_RS12120 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.4E-41 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VPUCM_RS05765 5c0a2941430dea22c2ec94733a4a7b24 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 185 8.4E-27 T 22-04-2016 IPR009576 Biofilm formation YgiB VPUCM_RS02570 44f39667ed352672118f48c19c09d9f6 273 PANTHER PTHR30589:SF0 2 261 2.8E-124 T 22-04-2016 VPUCM_RS02570 44f39667ed352672118f48c19c09d9f6 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VPUCM_RS02570 44f39667ed352672118f48c19c09d9f6 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 1.9E-90 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VPUCM_RS02570 44f39667ed352672118f48c19c09d9f6 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.086 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VPUCM_RS02570 44f39667ed352672118f48c19c09d9f6 273 PANTHER PTHR30589 2 261 2.8E-124 T 22-04-2016 VPUCM_RS02570 44f39667ed352672118f48c19c09d9f6 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.2E-83 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 Gene3D G3DSA:1.25.40.10 110 233 9.7E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 Gene3D G3DSA:1.25.40.10 42 95 8.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 Gene3D G3DSA:1.25.40.10 234 332 4.5E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 36.806 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 PANTHER PTHR23083 8 324 6.8E-37 T 22-04-2016 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 SMART SM00028 35 68 270.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 SMART SM00028 216 249 4.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 SMART SM00028 182 215 0.13 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 SMART SM00028 69 102 81.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 SUPERFAMILY SSF81901 39 269 1.54E-21 T 22-04-2016 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.027 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS10435 08b7e6378096d94bfb2cf2293988a046 391 Pfam PF14559 Tetratricopeptide repeat 194 248 4.8E-6 T 22-04-2016 VPUCM_RS06845 8f168b2c5f35d765dbc0a507bf718c53 368 SUPERFAMILY SSF52540 197 356 6.26E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06845 8f168b2c5f35d765dbc0a507bf718c53 368 SUPERFAMILY SSF52540 2 157 6.26E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06845 8f168b2c5f35d765dbc0a507bf718c53 368 Gene3D G3DSA:3.40.50.300 187 357 2.2E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06845 8f168b2c5f35d765dbc0a507bf718c53 368 Gene3D G3DSA:3.40.50.300 118 150 2.2E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06845 8f168b2c5f35d765dbc0a507bf718c53 368 Gene3D G3DSA:3.40.50.300 2 66 2.2E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06845 8f168b2c5f35d765dbc0a507bf718c53 368 Pfam PF13175 AAA ATPase domain 6 355 1.1E-20 T 22-04-2016 VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 Gene3D G3DSA:3.40.190.10 80 190 6.0E-12 T 22-04-2016 VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 Gene3D G3DSA:1.10.10.10 1 79 1.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 PANTHER PTHR30126:SF29 1 242 3.9E-70 T 22-04-2016 VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 Gene3D G3DSA:3.40.190.10 191 243 1.2E-4 T 22-04-2016 VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 SUPERFAMILY SSF46785 3 84 2.75E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 Pfam PF03466 LysR substrate binding domain 91 247 9.5E-21 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 SUPERFAMILY SSF53850 92 292 2.33E-26 T 22-04-2016 VPUCM_RS10245 dbf81cf7d66ddb2cd551fa09b047c8a6 294 PANTHER PTHR30126 1 242 3.9E-70 T 22-04-2016 VPUCM_RS15050 123250996b453b72c55eae2a92e9c053 209 PANTHER PTHR30231:SF7 1 204 1.1E-107 T 22-04-2016 VPUCM_RS15050 123250996b453b72c55eae2a92e9c053 209 PANTHER PTHR30231 1 204 1.1E-107 T 22-04-2016 VPUCM_RS15050 123250996b453b72c55eae2a92e9c053 209 SUPERFAMILY SSF53098 26 198 3.32E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS15050 123250996b453b72c55eae2a92e9c053 209 Gene3D G3DSA:3.30.420.10 27 199 4.4E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS15050 123250996b453b72c55eae2a92e9c053 209 SMART SM00479 29 202 5.1E-27 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS15050 123250996b453b72c55eae2a92e9c053 209 Pfam PF00929 Exonuclease 31 193 1.1E-18 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 3.5E-9 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.293 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 PANTHER PTHR20861:SF2 5 280 1.5E-97 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 Gene3D G3DSA:3.30.230.10 12 164 3.9E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 PIRSF PIRSF010376 9 285 4.1E-87 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 SUPERFAMILY SSF54211 11 163 6.45E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 PANTHER PTHR20861 5 280 1.5E-97 T 22-04-2016 VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 SUPERFAMILY SSF55060 167 282 6.71E-35 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 Gene3D G3DSA:3.30.70.890 168 284 2.3E-42 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 Pfam PF08544 GHMP kinases C terminal 209 265 2.8E-6 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS12310 343924136bfbe1c00837529d680e9d50 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 284 1.0E-94 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 PANTHER PTHR18968 1 546 2.1E-257 T 22-04-2016 VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 Gene3D G3DSA:3.40.50.1220 184 338 1.9E-54 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 2.7E-210 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 SUPERFAMILY SSF52518 358 545 1.23E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 Gene3D G3DSA:3.40.50.970 345 546 1.4E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 2.3E-40 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 PANTHER PTHR18968:SF116 1 546 2.1E-257 T 22-04-2016 VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 SUPERFAMILY SSF52518 1 176 1.23E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 SUPERFAMILY SSF52467 182 341 1.11E-55 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 2.7E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 Gene3D G3DSA:3.40.50.970 1 173 9.0E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VPUCM_RS15955 165761d33a992c3b5cdd14017eb34b45 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 3.1E-55 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 Gene3D G3DSA:1.10.287.730 145 169 8.7E-16 T 22-04-2016 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.3E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 3.5E-153 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 PANTHER PTHR22807 35 424 1.3E-128 T 22-04-2016 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 Gene3D G3DSA:1.10.940.10 1 144 8.1E-44 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 SUPERFAMILY SSF48013 1 146 1.96E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 PANTHER PTHR22807:SF30 35 424 1.3E-128 T 22-04-2016 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 SUPERFAMILY SSF53335 139 424 1.67E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 Pfam PF01029 NusB family 1 123 3.7E-24 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 5.3E-69 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 Gene3D G3DSA:3.30.70.1170 170 227 1.4E-26 T 22-04-2016 VPUCM_RS15890 b70092dd15aa24b3186c3188c1e6e2f0 427 Gene3D G3DSA:3.40.50.150 229 424 2.5E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS14525 dda2b71b7f8372a8f92bc7c4143295fd 260 PANTHER PTHR10516 134 255 1.5E-52 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VPUCM_RS14525 dda2b71b7f8372a8f92bc7c4143295fd 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.3E-29 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VPUCM_RS14525 dda2b71b7f8372a8f92bc7c4143295fd 260 Gene3D G3DSA:3.10.50.40 147 257 4.0E-47 T 22-04-2016 VPUCM_RS14525 dda2b71b7f8372a8f92bc7c4143295fd 260 SUPERFAMILY SSF54534 46 253 2.95E-64 T 22-04-2016 VPUCM_RS14525 dda2b71b7f8372a8f92bc7c4143295fd 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 6.8E-34 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VPUCM_RS14525 dda2b71b7f8372a8f92bc7c4143295fd 260 Gene3D G3DSA:1.10.287.460 40 146 1.6E-37 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.2E-30 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.2E-30 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.2E-30 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.2E-30 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 PANTHER PTHR30487 1 35 1.5E-113 T 22-04-2016 VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 PANTHER PTHR30487 57 283 1.5E-113 T 22-04-2016 VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 Pfam PF01478 Type IV leader peptidase family 135 244 5.5E-28 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 6.3E-33 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 PANTHER PTHR30487:SF0 1 35 1.5E-113 T 22-04-2016 VPUCM_RS13045 e3074a35d8a0b1cd2865e76a316a2df0 289 PANTHER PTHR30487:SF0 57 283 1.5E-113 T 22-04-2016 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 43 59 0.0025 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 0.0036 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 29 40 27.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.027 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 26 1.7 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 0.42 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 PANTHER PTHR38340 7 190 4.1E-12 T 22-04-2016 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 PRINTS PR00313 NodO calcium binding signature 106 114 2.4E-12 T 22-04-2016 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 PRINTS PR00313 NodO calcium binding signature 88 96 2.4E-12 T 22-04-2016 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.4E-12 T 22-04-2016 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 PRINTS PR00313 NodO calcium binding signature 76 87 2.4E-12 T 22-04-2016 VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 48 66 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 SUPERFAMILY SSF51120 9 203 5.67E-28 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VPUCM_RS06375 dea5d16d63d44f0cba1eb08c70b82d59 236 Gene3D G3DSA:2.150.10.10 9 199 2.5E-31 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VPUCM_RS15580 72c76b5bcc047186906099d33f9202e3 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 1.7E-9 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site VPUCM_RS02625 2e740d08b8ffe146786f966f3947c691 143 PANTHER PTHR10516:SF329 4 76 3.0E-18 T 22-04-2016 VPUCM_RS02625 2e740d08b8ffe146786f966f3947c691 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 5.7E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VPUCM_RS02625 2e740d08b8ffe146786f966f3947c691 143 PANTHER PTHR10516:SF329 132 143 3.0E-18 T 22-04-2016 VPUCM_RS02625 2e740d08b8ffe146786f966f3947c691 143 SUPERFAMILY SSF54534 4 142 2.16E-37 T 22-04-2016 VPUCM_RS02625 2e740d08b8ffe146786f966f3947c691 143 PANTHER PTHR10516 4 76 3.0E-18 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VPUCM_RS02625 2e740d08b8ffe146786f966f3947c691 143 Gene3D G3DSA:3.10.50.40 3 79 8.0E-19 T 22-04-2016 VPUCM_RS02625 2e740d08b8ffe146786f966f3947c691 143 Gene3D G3DSA:3.10.50.40 129 143 8.0E-19 T 22-04-2016 VPUCM_RS02625 2e740d08b8ffe146786f966f3947c691 143 PANTHER PTHR10516 132 143 3.0E-18 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VPUCM_RS03370 28db63c2e086ada00ae82e84c0f892d8 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 29.446 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VPUCM_RS03370 28db63c2e086ada00ae82e84c0f892d8 209 PANTHER PTHR10920 1 209 6.4E-135 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VPUCM_RS03370 28db63c2e086ada00ae82e84c0f892d8 209 PIRSF PIRSF005461 1 209 5.5E-80 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VPUCM_RS03370 28db63c2e086ada00ae82e84c0f892d8 209 PANTHER PTHR10920:SF20 1 209 6.4E-135 T 22-04-2016 VPUCM_RS03370 28db63c2e086ada00ae82e84c0f892d8 209 SUPERFAMILY SSF53335 30 209 6.72E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS03370 28db63c2e086ada00ae82e84c0f892d8 209 Gene3D G3DSA:3.40.50.150 1 208 3.6E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS03370 28db63c2e086ada00ae82e84c0f892d8 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 2.0E-57 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VPUCM_RS00735 e5a14f7554ce0060ee4190fd78e57d0b 241 Pfam PF00156 Phosphoribosyl transferase domain 145 237 5.5E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VPUCM_RS00735 e5a14f7554ce0060ee4190fd78e57d0b 241 Gene3D G3DSA:3.40.50.2020 66 237 2.7E-28 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS00735 e5a14f7554ce0060ee4190fd78e57d0b 241 PANTHER PTHR11907 13 238 7.4E-52 T 22-04-2016 VPUCM_RS00735 e5a14f7554ce0060ee4190fd78e57d0b 241 SUPERFAMILY SSF53271 67 239 4.85E-34 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS00735 e5a14f7554ce0060ee4190fd78e57d0b 241 PANTHER PTHR11907:SF9 13 238 7.4E-52 T 22-04-2016 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.0E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 SUPERFAMILY SSF143800 1 81 2.31E-23 T 22-04-2016 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 Pfam PF01197 Ribosomal protein L31 1 79 1.4E-27 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.8E-19 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 PANTHER PTHR33280:SF3 1 81 1.5E-41 T 22-04-2016 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.769 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS04575 1a219fc9de3661e94a8fade5d68d9a7d 86 PANTHER PTHR33280 1 81 1.5E-41 T 22-04-2016 VPUCM_RS01560 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01560 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 3.0E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01560 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 9.3E-35 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01560 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01560 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01560 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01560 7fc5641f69291cbf481ff2b64259efcd 126 PANTHER PTHR14413 1 119 3.5E-66 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 Pfam PF01039 Carboxyl transferase domain 100 240 5.2E-14 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 PANTHER PTHR22855:SF17 1 303 1.7E-179 T 22-04-2016 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 PANTHER PTHR22855 1 303 1.7E-179 T 22-04-2016 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 SUPERFAMILY SSF52096 25 282 2.27E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.517 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 7.1E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.4E-140 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS11310 416a49d3cbb0d29977e4e7dd90b86a2d 308 Gene3D G3DSA:3.90.226.10 18 282 7.2E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS10275 6af43fb07690f1400cacb9fc687eccbc 174 SUPERFAMILY SSF52499 2 162 5.36E-48 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS10275 6af43fb07690f1400cacb9fc687eccbc 174 PANTHER PTHR11080 1 163 1.2E-38 T 22-04-2016 VPUCM_RS10275 6af43fb07690f1400cacb9fc687eccbc 174 Pfam PF00857 Isochorismatase family 4 159 2.3E-33 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS10275 6af43fb07690f1400cacb9fc687eccbc 174 PANTHER PTHR11080:SF37 1 163 1.2E-38 T 22-04-2016 VPUCM_RS10275 6af43fb07690f1400cacb9fc687eccbc 174 Gene3D G3DSA:3.40.50.850 2 162 1.3E-44 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS15520 39244b493cadc6439292df864b3b9288 205 PANTHER PTHR30086 1 204 3.3E-97 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS15520 39244b493cadc6439292df864b3b9288 205 Pfam PF01810 LysE type translocator 15 202 7.3E-35 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS15520 39244b493cadc6439292df864b3b9288 205 PIRSF PIRSF006324 1 205 6.4E-56 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS15520 39244b493cadc6439292df864b3b9288 205 PANTHER PTHR30086:SF14 1 204 3.3E-97 T 22-04-2016 VPUCM_RS04570 d9a294f40d425c24e9b2f129cb62d18a 231 PANTHER PTHR12818:SF6 1 229 6.2E-117 T 22-04-2016 VPUCM_RS04570 d9a294f40d425c24e9b2f129cb62d18a 231 PANTHER PTHR12818 1 229 6.2E-117 T 22-04-2016 VPUCM_RS04570 d9a294f40d425c24e9b2f129cb62d18a 231 Gene3D G3DSA:2.40.30.70 2 157 1.1E-50 T 22-04-2016 IPR023370 TsaA-like domain VPUCM_RS04570 d9a294f40d425c24e9b2f129cb62d18a 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 6.4E-40 T 22-04-2016 IPR023370 TsaA-like domain VPUCM_RS04570 d9a294f40d425c24e9b2f129cb62d18a 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site VPUCM_RS04570 d9a294f40d425c24e9b2f129cb62d18a 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 146 1.2E-47 T 22-04-2016 IPR023370 TsaA-like domain VPUCM_RS04570 d9a294f40d425c24e9b2f129cb62d18a 231 SUPERFAMILY SSF118196 1 226 1.28E-78 T 22-04-2016 IPR023370 TsaA-like domain VPUCM_RS00990 0d755d5b1a96b29da55170e81653f74c 352 PANTHER PTHR30160:SF12 1 351 2.4E-143 T 22-04-2016 VPUCM_RS00990 0d755d5b1a96b29da55170e81653f74c 352 Gene3D G3DSA:3.40.50.2000 11 154 5.2E-25 T 22-04-2016 VPUCM_RS00990 0d755d5b1a96b29da55170e81653f74c 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 311 1.0E-58 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VPUCM_RS00990 0d755d5b1a96b29da55170e81653f74c 352 Gene3D G3DSA:3.40.50.2000 168 345 5.8E-47 T 22-04-2016 VPUCM_RS00990 0d755d5b1a96b29da55170e81653f74c 352 SUPERFAMILY SSF53756 10 343 2.83E-85 T 22-04-2016 VPUCM_RS00990 0d755d5b1a96b29da55170e81653f74c 352 PANTHER PTHR30160 1 351 2.4E-143 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 SUPERFAMILY SSF52777 386 627 3.51E-81 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 SUPERFAMILY SSF51230 203 295 2.49E-23 T 22-04-2016 IPR011053 Single hybrid motif VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Gene3D G3DSA:4.10.320.10 318 363 5.5E-21 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 SUPERFAMILY SSF51230 104 196 8.25E-23 T 22-04-2016 IPR011053 Single hybrid motif VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 SUPERFAMILY SSF47005 317 361 9.55E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 PANTHER PTHR23151 380 628 1.6E-261 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 PANTHER PTHR23151 202 363 1.6E-261 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 PANTHER PTHR23151 21 110 1.6E-261 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Pfam PF00364 Biotin-requiring enzyme 105 175 3.2E-20 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Pfam PF00364 Biotin-requiring enzyme 4 73 4.4E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Pfam PF00364 Biotin-requiring enzyme 204 274 2.2E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 182 628 2.4E-207 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 SUPERFAMILY SSF51230 1 94 6.02E-24 T 22-04-2016 IPR011053 Single hybrid motif VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Gene3D G3DSA:3.30.559.10 387 628 4.1E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 397 627 5.2E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Gene3D G3DSA:2.40.50.100 1 94 5.2E-23 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Gene3D G3DSA:2.40.50.100 205 279 1.2E-21 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Gene3D G3DSA:2.40.50.100 106 181 5.5E-21 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 PANTHER PTHR23151:SF68 380 628 1.6E-261 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 PANTHER PTHR23151:SF68 202 363 1.6E-261 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 PANTHER PTHR23151:SF68 21 110 1.6E-261 T 22-04-2016 VPUCM_RS13005 17da8851cf5f8db35e09f4b7a885ccff 628 Pfam PF02817 e3 binding domain 323 357 3.2E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VPUCM_RS07700 b77e91c8e764e90e4c92448270a4af55 208 PANTHER PTHR30086 1 207 9.3E-58 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS07700 b77e91c8e764e90e4c92448270a4af55 208 PIRSF PIRSF006324 1 207 1.3E-60 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS07700 b77e91c8e764e90e4c92448270a4af55 208 Pfam PF01810 LysE type translocator 15 203 8.8E-36 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS07700 b77e91c8e764e90e4c92448270a4af55 208 PANTHER PTHR30086:SF4 1 207 9.3E-58 T 22-04-2016 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 444 514 2.5E-5 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 98 164 2.2E-5 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 357 427 1.6E-6 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 Gene3D G3DSA:2.60.40.1080 189 267 7.1E-4 T 22-04-2016 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 Gene3D G3DSA:2.60.40.1080 97 179 5.7E-9 T 22-04-2016 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 Gene3D G3DSA:2.60.40.1080 442 516 1.8E-7 T 22-04-2016 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 Gene3D G3DSA:2.60.40.1080 273 351 1.3E-4 T 22-04-2016 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 SUPERFAMILY SSF49373 97 179 1.02E-6 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 SMART SM00635 270 349 0.0098 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 SMART SM00635 355 435 2.3E-9 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 SMART SM00635 441 522 5.1E-7 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 SMART SM00635 183 264 0.59 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VPUCM_RS09170 e8d568c4375f49d7780f0637436199f0 736 SMART SM00635 97 178 1.0E-7 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 SUPERFAMILY SSF50346 106 182 1.02E-19 T 22-04-2016 IPR011033 PRC-barrel-like VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 Gene3D G3DSA:2.30.30.240 106 182 3.2E-29 T 22-04-2016 VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 PANTHER PTHR33692:SF1 9 180 9.0E-60 T 22-04-2016 VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 7.3E-55 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 Pfam PF01782 RimM N-terminal domain 15 95 8.4E-25 T 22-04-2016 IPR002676 RimM protein GO:0006364 VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 SUPERFAMILY SSF50447 13 100 9.18E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 PANTHER PTHR33692 9 180 9.0E-60 T 22-04-2016 VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 Gene3D G3DSA:2.40.30.60 7 100 7.9E-33 T 22-04-2016 IPR002676 RimM protein GO:0006364 VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.604 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VPUCM_RS13075 73a97641593688f93041ce8f04c04469 182 Pfam PF05239 PRC-barrel domain 103 168 5.9E-11 T 22-04-2016 IPR027275 PRC-barrel domain VPUCM_RS02355 f28fda2618f8ec84202f5b4fa29550df 274 PANTHER PTHR30535 20 267 5.2E-54 T 22-04-2016 VPUCM_RS02355 f28fda2618f8ec84202f5b4fa29550df 274 SUPERFAMILY SSF53807 21 267 4.71E-58 T 22-04-2016 VPUCM_RS02355 f28fda2618f8ec84202f5b4fa29550df 274 Gene3D G3DSA:3.40.50.1980 22 140 9.1E-30 T 22-04-2016 VPUCM_RS02355 f28fda2618f8ec84202f5b4fa29550df 274 Pfam PF01497 Periplasmic binding protein 25 246 3.5E-29 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VPUCM_RS02355 f28fda2618f8ec84202f5b4fa29550df 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 271 51.929 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VPUCM_RS02355 f28fda2618f8ec84202f5b4fa29550df 274 Gene3D G3DSA:3.40.50.1980 144 267 2.4E-35 T 22-04-2016 VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 SUPERFAMILY SSF54211 238 493 9.86E-100 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 SUPERFAMILY SSF55874 10 215 4.32E-63 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 Pfam PF00183 Hsp90 protein 227 632 2.8E-127 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 6.2E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 SMART SM00387 32 189 6.9E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PANTHER PTHR11528 2 634 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 4.5E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 Gene3D G3DSA:3.30.565.10 10 246 3.7E-81 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.344 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PIRSF PIRSF002583 1 634 8.3E-213 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 PANTHER PTHR11528:SF44 2 634 0.0 T 22-04-2016 VPUCM_RS11920 188b9f0e04b2e8d1be9b87081477afe4 634 SUPERFAMILY SSF110942 520 632 7.98E-34 T 22-04-2016 VPUCM_RS12730 a402bedbbe33268b8daff57fd8670edb 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 31.562 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VPUCM_RS12730 a402bedbbe33268b8daff57fd8670edb 129 Pfam PF07417 Transcriptional regulator Crl 6 123 4.7E-49 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VPUCM_RS12665 404066f0bb7e974bf8325b596a26efac 80 Gene3D G3DSA:1.10.287.1040 5 78 5.9E-27 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPUCM_RS12665 404066f0bb7e974bf8325b596a26efac 80 SUPERFAMILY SSF116842 2 72 9.29E-21 T 22-04-2016 VPUCM_RS12665 404066f0bb7e974bf8325b596a26efac 80 PANTHER PTHR34137 1 80 6.7E-26 T 22-04-2016 VPUCM_RS12665 404066f0bb7e974bf8325b596a26efac 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.2E-18 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPUCM_RS12665 404066f0bb7e974bf8325b596a26efac 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPUCM_RS12665 404066f0bb7e974bf8325b596a26efac 80 PIRSF PIRSF006488 1 80 7.4E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPUCM_RS12665 404066f0bb7e974bf8325b596a26efac 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPUCM_RS12665 404066f0bb7e974bf8325b596a26efac 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VPUCM_RS08410 64ce2784ad07c75b6d9f4277eb69d1e6 277 Pfam PF13509 S1 domain 4 63 1.0E-23 T 22-04-2016 VPUCM_RS08410 64ce2784ad07c75b6d9f4277eb69d1e6 277 PANTHER PTHR37296 1 277 4.2E-112 T 22-04-2016 VPUCM_RS08410 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 3 64 14.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS08410 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 69 132 6.4 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS08410 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 145 207 0.14 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS08410 64ce2784ad07c75b6d9f4277eb69d1e6 277 PIRSF PIRSF012524 1 277 1.6E-98 T 22-04-2016 IPR014464 Conserved virulence factor B VPUCM_RS15400 fdbdb7df44a266fc457e5d63d09e49ae 183 Pfam PF04345 Chorismate lyase 18 182 4.7E-57 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VPUCM_RS15400 fdbdb7df44a266fc457e5d63d09e49ae 183 SUPERFAMILY SSF64288 11 178 6.12E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VPUCM_RS15400 fdbdb7df44a266fc457e5d63d09e49ae 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.643 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VPUCM_RS15400 fdbdb7df44a266fc457e5d63d09e49ae 183 PANTHER PTHR38683 7 183 7.3E-52 T 22-04-2016 VPUCM_RS15400 fdbdb7df44a266fc457e5d63d09e49ae 183 Gene3D G3DSA:3.40.1410.10 16 178 7.7E-51 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VPUCM_RS10710 9e7de9234b8edf03f2690dd794aacc6f 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 3.9E-30 T 22-04-2016 IPR011846 Cyd operon protein YbgE VPUCM_RS10710 9e7de9234b8edf03f2690dd794aacc6f 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 100 2.0E-41 T 22-04-2016 IPR011846 Cyd operon protein YbgE VPUCM_RS07610 630fe967406bc3dfc78726e2bb4d1553 139 Gene3D G3DSA:3.90.79.10 5 128 4.6E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS07610 630fe967406bc3dfc78726e2bb4d1553 139 SUPERFAMILY SSF55811 6 137 2.57E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS07610 630fe967406bc3dfc78726e2bb4d1553 139 Pfam PF00293 NUDIX domain 6 127 2.1E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 Gene3D G3DSA:1.10.357.10 3 206 1.9E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 PANTHER PTHR30055:SF73 4 174 1.3E-43 T 22-04-2016 VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 PANTHER PTHR30055 4 174 1.3E-43 T 22-04-2016 VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 SUPERFAMILY SSF46689 3 75 1.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 SUPERFAMILY SSF48498 80 207 6.23E-40 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VPUCM_RS09875 b2b789bbc50a684f75cd6e23e1842e50 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 5.5E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS07885 2b338928b96bcccdf4626d91a48c4d7e 129 Pfam PF13671 AAA domain 6 106 1.4E-14 T 22-04-2016 VPUCM_RS07885 2b338928b96bcccdf4626d91a48c4d7e 129 PANTHER PTHR13308 5 89 3.3E-21 T 22-04-2016 VPUCM_RS07885 2b338928b96bcccdf4626d91a48c4d7e 129 Gene3D G3DSA:3.40.50.300 5 127 2.9E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07885 2b338928b96bcccdf4626d91a48c4d7e 129 SUPERFAMILY SSF52540 5 105 2.14E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07885 2b338928b96bcccdf4626d91a48c4d7e 129 PANTHER PTHR13308:SF5 5 89 3.3E-21 T 22-04-2016 IPR026567 NEDD4-binding protein 2-like 1 VPUCM_RS01045 da96c6835e5743257483c0211621a6ed 217 Gene3D G3DSA:2.160.10.10 98 207 1.6E-24 T 22-04-2016 VPUCM_RS01045 da96c6835e5743257483c0211621a6ed 217 SUPERFAMILY SSF51161 4 207 7.49E-41 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS01045 da96c6835e5743257483c0211621a6ed 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 166 197 6.8E-8 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS01045 da96c6835e5743257483c0211621a6ed 217 PANTHER PTHR23416 118 205 5.5E-15 T 22-04-2016 VPUCM_RS01045 da96c6835e5743257483c0211621a6ed 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 9 207 5.5E-57 T 22-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like VPUCM_RS01045 da96c6835e5743257483c0211621a6ed 217 Gene3D G3DSA:3.40.50.20 7 96 4.4E-5 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.1E-83 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 PANTHER PTHR30034:SF0 2 344 3.9E-150 T 22-04-2016 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 PIRSF PIRSF002888 1 328 7.6E-92 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 Gene3D G3DSA:2.30.330.10 243 321 3.0E-9 T 22-04-2016 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 PANTHER PTHR30034 2 344 3.9E-150 T 22-04-2016 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 6.9E-125 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 Gene3D G3DSA:3.40.1550.10 60 230 5.8E-6 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 7.4E-17 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF103039 54 230 5.49E-21 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF103039 4 13 5.49E-21 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS11565 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF101801 247 322 1.96E-13 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VPUCM_RS01950 6bd2e231adb31ca0a1ea20809ed780a6 176 SUPERFAMILY SSF158668 4 170 4.32E-58 T 22-04-2016 VPUCM_RS01950 6bd2e231adb31ca0a1ea20809ed780a6 176 Gene3D G3DSA:1.20.120.330 3 171 3.7E-66 T 22-04-2016 VPUCM_RS01950 6bd2e231adb31ca0a1ea20809ed780a6 176 Pfam PF05068 Mannitol repressor 7 170 9.8E-62 T 22-04-2016 IPR007761 Mannitol repressor VPUCM_RS01950 6bd2e231adb31ca0a1ea20809ed780a6 176 PANTHER PTHR37941 1 176 2.2E-41 T 22-04-2016 VPUCM_RS00630 ba989d02e543f541ac862a60212499fa 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 3.2E-63 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VPUCM_RS00630 ba989d02e543f541ac862a60212499fa 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.545 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VPUCM_RS00630 ba989d02e543f541ac862a60212499fa 144 PANTHER PTHR10472 2 143 1.4E-65 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VPUCM_RS00630 ba989d02e543f541ac862a60212499fa 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.8E-49 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VPUCM_RS00630 ba989d02e543f541ac862a60212499fa 144 Gene3D G3DSA:3.50.80.10 3 143 9.4E-52 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VPUCM_RS00630 ba989d02e543f541ac862a60212499fa 144 SUPERFAMILY SSF69500 2 143 2.88E-53 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VPUCM_RS20140 35070a6358516f2edbab302559d487b6 276 PANTHER PTHR35007 142 274 5.2E-31 T 22-04-2016 VPUCM_RS20140 35070a6358516f2edbab302559d487b6 276 PANTHER PTHR35007:SF1 142 274 5.2E-31 T 22-04-2016 VPUCM_RS20140 35070a6358516f2edbab302559d487b6 276 Pfam PF00482 Type II secretion system (T2SS), protein F 155 274 3.7E-17 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS02675 dc327df94aa9b53c659730fc6de4537c 357 Gene3D G3DSA:3.20.20.70 11 349 6.0E-156 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS02675 dc327df94aa9b53c659730fc6de4537c 357 PANTHER PTHR21225 1 348 6.9E-222 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS02675 dc327df94aa9b53c659730fc6de4537c 357 PIRSF PIRSF001361 1 354 9.0E-164 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS02675 dc327df94aa9b53c659730fc6de4537c 357 Pfam PF00793 DAHP synthetase I family 41 340 2.8E-105 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VPUCM_RS02675 dc327df94aa9b53c659730fc6de4537c 357 SUPERFAMILY SSF51569 8 345 8.33E-139 T 22-04-2016 VPUCM_RS02675 dc327df94aa9b53c659730fc6de4537c 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 346 2.3E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS10690 a9f4d1921168f9872f720c4780d7dd00 356 TIGRFAM TIGR02794 tolA_full: protein TolA 13 353 9.6E-93 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10690 a9f4d1921168f9872f720c4780d7dd00 356 Pfam PF06519 TolA C-terminal 254 352 4.4E-35 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10690 a9f4d1921168f9872f720c4780d7dd00 356 SUPERFAMILY SSF74653 264 355 2.75E-15 T 22-04-2016 VPUCM_RS10690 a9f4d1921168f9872f720c4780d7dd00 356 Gene3D G3DSA:3.30.1150.10 253 355 2.3E-21 T 22-04-2016 VPUCM_RS09665 c65d23212bad4804112460af70408d53 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 1.1E-98 T 22-04-2016 IPR021974 Protein of unknown function DUF3581 VPUCM_RS11190 fa1df6f8a6c444fb301bbd6b6e24cf6c 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 2.0E-17 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VPUCM_RS11190 fa1df6f8a6c444fb301bbd6b6e24cf6c 131 PANTHER PTHR10374:SF8 3 129 3.6E-33 T 22-04-2016 VPUCM_RS11190 fa1df6f8a6c444fb301bbd6b6e24cf6c 131 PANTHER PTHR10374 3 129 3.6E-33 T 22-04-2016 VPUCM_RS11190 fa1df6f8a6c444fb301bbd6b6e24cf6c 131 Gene3D G3DSA:3.10.180.10 2 127 4.1E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS11190 fa1df6f8a6c444fb301bbd6b6e24cf6c 131 SUPERFAMILY SSF54593 2 127 1.75E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 SUPERFAMILY SSF52540 85 363 1.57E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 Gene3D G3DSA:3.40.50.300 7 223 7.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 2.4E-45 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 SMART SM00490 270 351 1.2E-32 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 SMART SM00487 28 234 1.4E-53 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 Gene3D G3DSA:3.40.50.300 224 380 1.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.8E-30 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 PANTHER PTHR24031:SF173 1 430 6.0E-282 T 22-04-2016 VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.667 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VPUCM_RS15660 7ba05d32130f05a911522b9202955d5a 437 PANTHER PTHR24031 1 430 6.0E-282 T 22-04-2016 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 30 944 19.171 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 Pfam PF08335 GlnD PII-uridylyltransferase 830 912 2.5E-7 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 4.1E-44 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 PANTHER PTHR30621 7 945 0.0 T 22-04-2016 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 Gene3D G3DSA:3.30.460.10 642 815 1.3E-58 T 22-04-2016 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 Gene3D G3DSA:3.30.460.10 115 288 3.0E-61 T 22-04-2016 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 7.2E-98 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 1.6E-94 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 SUPERFAMILY SSF81593 818 946 2.28E-32 T 22-04-2016 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 SUPERFAMILY SSF81301 23 289 5.23E-88 T 22-04-2016 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 SUPERFAMILY SSF81301 528 818 3.27E-88 T 22-04-2016 VPUCM_RS02095 6fe310dc70106ce9cd25306327d37184 947 SUPERFAMILY SSF81593 290 439 2.43E-42 T 22-04-2016 VPUCM_RS14360 67a0e441ecd53de5f9bb8bb08098674b 366 Gene3D G3DSA:1.20.1090.10 177 360 8.8E-68 T 22-04-2016 VPUCM_RS14360 67a0e441ecd53de5f9bb8bb08098674b 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 1.6E-119 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS14360 67a0e441ecd53de5f9bb8bb08098674b 366 SUPERFAMILY SSF56796 4 360 7.98E-118 T 22-04-2016 VPUCM_RS14360 67a0e441ecd53de5f9bb8bb08098674b 366 PANTHER PTHR21090 1 366 1.5E-204 T 22-04-2016 VPUCM_RS14360 67a0e441ecd53de5f9bb8bb08098674b 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 362 43.393 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS14360 67a0e441ecd53de5f9bb8bb08098674b 366 Gene3D G3DSA:3.40.50.1970 2 176 5.2E-66 T 22-04-2016 VPUCM_RS14360 67a0e441ecd53de5f9bb8bb08098674b 366 Pfam PF01761 3-dehydroquinate synthase 72 329 3.1E-110 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS14360 67a0e441ecd53de5f9bb8bb08098674b 366 PIRSF PIRSF001455 22 365 1.3E-106 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 PANTHER PTHR10342:SF215 571 580 2.4E-90 T 22-04-2016 VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 PANTHER PTHR10342:SF215 230 550 2.4E-90 T 22-04-2016 VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 Gene3D G3DSA:3.40.720.10 259 534 2.1E-34 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 4.8E-99 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 PIRSF PIRSF004950 6 600 9.2E-255 T 22-04-2016 IPR012159 Inner membrane protein YejM VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 SUPERFAMILY SSF53649 257 584 7.56E-52 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 PANTHER PTHR10342 571 580 2.4E-90 T 22-04-2016 VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 PANTHER PTHR10342 230 550 2.4E-90 T 22-04-2016 VPUCM_RS11085 6c9885db436313c81eb5a1d644391735 602 Pfam PF00884 Sulfatase 267 515 4.7E-21 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 PANTHER PTHR18866 1 442 9.9E-304 T 22-04-2016 VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.40.50.20 1 129 9.9E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF52440 1 113 4.6E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.6E-243 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 5.9E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 SMART SM00878 336 441 1.3E-64 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF51246 331 444 1.36E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.4E-83 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF56059 83 346 2.12E-69 T 22-04-2016 VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.30.1490.20 130 203 2.3E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VPUCM_RS15070 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.30.470.20 204 444 5.5E-102 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS00840 076abdf83d0d379c18d0c36cb70dc4c4 254 PIRSF PIRSF028069 4 254 7.6E-97 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VPUCM_RS00840 076abdf83d0d379c18d0c36cb70dc4c4 254 Pfam PF11932 Protein of unknown function (DUF3450) 12 249 2.9E-89 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VPUCM_RS08050 42a4e91773383b87607372679fd87bfe 168 PANTHER PTHR24188:SF25 10 161 3.3E-16 T 22-04-2016 VPUCM_RS08050 42a4e91773383b87607372679fd87bfe 168 Pfam PF12796 Ankyrin repeats (3 copies) 43 132 7.0E-14 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain VPUCM_RS08050 42a4e91773383b87607372679fd87bfe 168 SUPERFAMILY SSF48403 11 161 1.41E-20 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain VPUCM_RS08050 42a4e91773383b87607372679fd87bfe 168 SMART SM00248 72 101 4.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 VPUCM_RS08050 42a4e91773383b87607372679fd87bfe 168 SMART SM00248 104 133 0.064 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 VPUCM_RS08050 42a4e91773383b87607372679fd87bfe 168 SMART SM00248 34 67 26.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 VPUCM_RS08050 42a4e91773383b87607372679fd87bfe 168 PANTHER PTHR24188 10 161 3.3E-16 T 22-04-2016 VPUCM_RS08050 42a4e91773383b87607372679fd87bfe 168 Gene3D G3DSA:1.25.40.20 9 161 1.7E-21 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 15 110 2.7E-20 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 PANTHER PTHR11079 13 223 2.9E-63 T 22-04-2016 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 PANTHER PTHR11079 349 359 2.9E-63 T 22-04-2016 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 PIRSF PIRSF006769 11 372 4.5E-118 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 367 3.3E-55 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 PANTHER PTHR11079:SF10 13 223 2.9E-63 T 22-04-2016 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 PANTHER PTHR11079:SF10 349 359 2.9E-63 T 22-04-2016 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 Gene3D G3DSA:3.40.430.10 140 370 4.3E-61 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 SUPERFAMILY SSF53927 14 156 2.17E-48 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 Gene3D G3DSA:3.40.140.10 14 139 4.8E-36 T 22-04-2016 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 SUPERFAMILY SSF53597 155 366 2.75E-51 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 Pfam PF01872 RibD C-terminal domain 158 361 3.8E-46 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VPUCM_RS12710 20b0c33f9897fa640819042c35a22e18 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 3.7E-124 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VPUCM_RS15830 290ba65205f5630f582d603ebc1910f9 87 SUPERFAMILY SSF160272 1 86 1.7E-29 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VPUCM_RS15830 290ba65205f5630f582d603ebc1910f9 87 Gene3D G3DSA:3.30.160.140 1 86 3.7E-35 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VPUCM_RS15830 290ba65205f5630f582d603ebc1910f9 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 86 4.9E-27 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VPUCM_RS15825 430db4e2e543ba11498a682841a4929e 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 9.5E-4 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS15825 430db4e2e543ba11498a682841a4929e 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.6E-5 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS15825 430db4e2e543ba11498a682841a4929e 182 SUPERFAMILY SSF51161 4 174 1.14E-43 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS15825 430db4e2e543ba11498a682841a4929e 182 Gene3D G3DSA:2.160.10.10 4 175 1.7E-44 T 22-04-2016 VPUCM_RS15825 430db4e2e543ba11498a682841a4929e 182 PANTHER PTHR13061 1 177 2.4E-71 T 22-04-2016 VPUCM_RS07585 500930ec337d6a868bd7e969f183ae2e 323 SUPERFAMILY SSF52172 1 125 8.68E-30 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS07585 500930ec337d6a868bd7e969f183ae2e 323 SMART SM00448 1 113 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS07585 500930ec337d6a868bd7e969f183ae2e 323 Pfam PF00072 Response regulator receiver domain 3 110 4.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS07585 500930ec337d6a868bd7e969f183ae2e 323 Gene3D G3DSA:3.40.1550.10 143 318 7.5E-20 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS07585 500930ec337d6a868bd7e969f183ae2e 323 Gene3D G3DSA:3.40.50.2300 1 116 1.2E-29 T 22-04-2016 VPUCM_RS07585 500930ec337d6a868bd7e969f183ae2e 323 PANTHER PTHR26402 1 110 4.0E-31 T 22-04-2016 VPUCM_RS07585 500930ec337d6a868bd7e969f183ae2e 323 SUPERFAMILY SSF103039 142 321 1.31E-30 T 22-04-2016 IPR028976 CheC-like domain VPUCM_RS03160 d8628f1debd32ca125ffe7d77c1d1a69 378 Pfam PF01764 Lipase (class 3) 73 203 4.8E-22 T 22-04-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: REACT_14797|Reactome: REACT_604 VPUCM_RS03160 d8628f1debd32ca125ffe7d77c1d1a69 378 PANTHER PTHR21493 350 361 1.3E-19 T 22-04-2016 VPUCM_RS03160 d8628f1debd32ca125ffe7d77c1d1a69 378 PANTHER PTHR21493 69 202 1.3E-19 T 22-04-2016 VPUCM_RS03160 d8628f1debd32ca125ffe7d77c1d1a69 378 SUPERFAMILY SSF53474 67 218 8.39E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS03160 d8628f1debd32ca125ffe7d77c1d1a69 378 Gene3D G3DSA:3.40.50.1820 9 219 7.7E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS03010 84f5edd39db94c9da79a1cc0c31fb4b8 204 PIRSF PIRSF006170 1 204 1.3E-53 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 VPUCM_RS03010 84f5edd39db94c9da79a1cc0c31fb4b8 204 Gene3D G3DSA:1.25.40.10 52 188 2.0E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS03010 84f5edd39db94c9da79a1cc0c31fb4b8 204 SUPERFAMILY SSF48452 89 188 3.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS03010 84f5edd39db94c9da79a1cc0c31fb4b8 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.7E-55 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain VPUCM_RS03010 84f5edd39db94c9da79a1cc0c31fb4b8 204 PANTHER PTHR38035 2 204 8.6E-74 T 22-04-2016 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 155 841 4.9E-285 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PANTHER PTHR10587:SF94 187 726 3.1E-113 T 22-04-2016 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 SUPERFAMILY SSF53448 280 560 7.5E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 Gene3D G3DSA:3.90.550.10 283 515 1.3E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PANTHER PTHR10587 187 726 3.1E-113 T 22-04-2016 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 Pfam PF07238 PilZ domain 702 802 1.6E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PRINTS PR01439 Cellulose synthase subunit A signature 290 309 4.6E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PRINTS PR01439 Cellulose synthase subunit A signature 371 395 4.6E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PRINTS PR01439 Cellulose synthase subunit A signature 601 620 4.6E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PRINTS PR01439 Cellulose synthase subunit A signature 561 580 4.6E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PRINTS PR01439 Cellulose synthase subunit A signature 207 227 4.6E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PRINTS PR01439 Cellulose synthase subunit A signature 235 260 4.6E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PRINTS PR01439 Cellulose synthase subunit A signature 532 558 4.6E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 PRINTS PR01439 Cellulose synthase subunit A signature 675 696 4.6E-56 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 Pfam PF00535 Glycosyl transferase family 2 286 455 1.2E-34 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS12000 e8788925e47c738da99a49ac877a6ce5 877 SUPERFAMILY SSF141371 704 793 1.06E-6 T 22-04-2016 VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 PIRSF PIRSF000485 1 479 3.6E-169 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 Gene3D G3DSA:3.40.50.2020 270 443 6.0E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 PANTHER PTHR11907:SF0 1 477 5.3E-257 T 22-04-2016 VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 Pfam PF13522 Glutamine amidotransferase domain 63 207 2.4E-17 T 22-04-2016 VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.0E-165 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 Gene3D G3DSA:3.60.20.10 2 257 2.1E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 SUPERFAMILY SSF53271 249 482 9.96E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 PANTHER PTHR11907 1 477 5.3E-257 T 22-04-2016 VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 SUPERFAMILY SSF56235 2 256 5.49E-71 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.866 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VPUCM_RS11290 57e0f055c3418d6accd866299e0dad1c 504 Pfam PF00156 Phosphoribosyl transferase domain 278 389 7.3E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VPUCM_RS15365 0dfeaa01c9a16513eb6b2e55f8032998 213 PANTHER PTHR30055:SF39 1 206 5.7E-106 T 22-04-2016 VPUCM_RS15365 0dfeaa01c9a16513eb6b2e55f8032998 213 Gene3D G3DSA:1.10.357.10 5 195 8.5E-36 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VPUCM_RS15365 0dfeaa01c9a16513eb6b2e55f8032998 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VPUCM_RS15365 0dfeaa01c9a16513eb6b2e55f8032998 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS15365 0dfeaa01c9a16513eb6b2e55f8032998 213 PANTHER PTHR30055 1 206 5.7E-106 T 22-04-2016 VPUCM_RS15365 0dfeaa01c9a16513eb6b2e55f8032998 213 SUPERFAMILY SSF46689 5 80 3.64E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 PRINTS PR00073 Coprogen oxidase signature 94 118 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 PRINTS PR00073 Coprogen oxidase signature 129 151 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 PRINTS PR00073 Coprogen oxidase signature 238 265 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 PRINTS PR00073 Coprogen oxidase signature 31 47 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 PRINTS PR00073 Coprogen oxidase signature 166 195 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 PRINTS PR00073 Coprogen oxidase signature 266 292 8.4E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 Gene3D G3DSA:3.40.1500.10 6 305 1.1E-135 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 PANTHER PTHR10755 6 305 1.2E-181 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 3.0E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 PIRSF PIRSF000166 2 305 5.2E-128 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.772 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS15840 7933ed6b4d0607f89eebca389e40b062 305 SUPERFAMILY SSF102886 6 305 6.67E-137 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 SUPERFAMILY SSF52788 1 149 8.63E-48 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 3.4E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 3.4E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 3.4E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 3.4E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 3.4E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 SMART SM00226 2 148 8.5E-42 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 144 1.1E-37 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 Gene3D G3DSA:3.40.50.270 1 149 5.8E-50 T 22-04-2016 VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 PANTHER PTHR11717:SF7 1 149 6.9E-55 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VPUCM_RS10615 025ab9151236e2d22bad20fb2b57fe59 149 PANTHER PTHR11717 1 149 6.9E-55 T 22-04-2016 VPUCM_RS02155 04ff3be167fc1febcc3fb152e36aa0f0 367 Gene3D G3DSA:3.40.50.300 15 177 3.8E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02155 04ff3be167fc1febcc3fb152e36aa0f0 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 52.729 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VPUCM_RS02155 04ff3be167fc1febcc3fb152e36aa0f0 367 PANTHER PTHR12169:SF11 1 366 1.7E-178 T 22-04-2016 VPUCM_RS02155 04ff3be167fc1febcc3fb152e36aa0f0 367 SUPERFAMILY SSF52540 62 200 1.19E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02155 04ff3be167fc1febcc3fb152e36aa0f0 367 PANTHER PTHR12169 1 366 1.7E-178 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VPUCM_RS02155 04ff3be167fc1febcc3fb152e36aa0f0 367 Pfam PF03969 AFG1-like ATPase 1 364 2.9E-152 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 PANTHER PTHR11999:SF106 456 954 4.6E-173 T 22-04-2016 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 SUPERFAMILY SSF53383 42 464 1.13E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 Gene3D G3DSA:3.40.640.10 571 844 2.2E-89 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 Pfam PF00202 Aminotransferase class-III 51 464 1.8E-94 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 466 4.8E-160 T 22-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 Gene3D G3DSA:3.90.1150.10 339 463 3.5E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 Gene3D G3DSA:3.40.640.10 88 338 2.9E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 Gene3D G3DSA:1.20.1650.10 464 560 1.4E-39 T 22-04-2016 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 Gene3D G3DSA:3.90.1150.10 845 957 3.9E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 SUPERFAMILY SSF53383 506 951 1.97E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 532 892 1.9E-61 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VPUCM_RS06440 ca3420da4f305667d9e2355cf2823c57 958 PANTHER PTHR11999 456 954 4.6E-173 T 22-04-2016 VPUCM_RS12280 9b95c481413a7ae4eb609efd6c885514 269 Pfam PF13371 Tetratricopeptide repeat 187 259 1.9E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS12280 9b95c481413a7ae4eb609efd6c885514 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 3.7E-44 T 22-04-2016 IPR032698 Protein SirB1, N-terminal VPUCM_RS12280 9b95c481413a7ae4eb609efd6c885514 269 PANTHER PTHR31350 10 265 3.8E-48 T 22-04-2016 VPUCM_RS12280 9b95c481413a7ae4eb609efd6c885514 269 SUPERFAMILY SSF48452 191 255 2.76E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS12280 9b95c481413a7ae4eb609efd6c885514 269 Gene3D G3DSA:1.25.40.10 183 250 1.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS12280 9b95c481413a7ae4eb609efd6c885514 269 Gene3D G3DSA:1.25.40.10 32 48 1.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS09145 36756fd3bfe3013cf4ce8c8c6d29b2c7 117 Pfam PF04237 YjbR 13 102 1.4E-25 T 22-04-2016 IPR007351 Uncharacterised protein YjbR VPUCM_RS09145 36756fd3bfe3013cf4ce8c8c6d29b2c7 117 SUPERFAMILY SSF142906 1 115 7.19E-39 T 22-04-2016 VPUCM_RS09145 36756fd3bfe3013cf4ce8c8c6d29b2c7 117 PANTHER PTHR35145 1 117 9.9E-34 T 22-04-2016 VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 Gene3D G3DSA:3.10.50.40 93 205 8.4E-44 T 22-04-2016 VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 PANTHER PTHR10516:SF320 86 205 3.7E-63 T 22-04-2016 VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 PANTHER PTHR10516:SF320 19 44 3.7E-63 T 22-04-2016 VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 5.6E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 2.1E-26 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 PANTHER PTHR10516 86 205 3.7E-63 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 PANTHER PTHR10516 19 44 3.7E-63 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 SUPERFAMILY SSF54534 7 205 8.05E-54 T 22-04-2016 VPUCM_RS01570 e8c1b29133812b93f3341b2c2d735b7f 206 Gene3D G3DSA:1.10.287.460 3 92 2.2E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VPUCM_RS08680 33cf1fd1630df8ad3c9e9deac074b969 297 SUPERFAMILY SSF140591 75 272 7.06E-51 T 22-04-2016 VPUCM_RS08680 33cf1fd1630df8ad3c9e9deac074b969 297 Pfam PF07201 HrpJ-like domain 60 226 2.0E-36 T 22-04-2016 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 VPUCM_RS08680 33cf1fd1630df8ad3c9e9deac074b969 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 3.5E-84 T 22-04-2016 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 Gene3D G3DSA:3.40.50.300 197 362 4.7E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 SUPERFAMILY SSF52540 197 372 5.03E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 8.9E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 8.9E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 8.9E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 PANTHER PTHR10229 1 427 3.2E-186 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.8E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 SUPERFAMILY SSF54980 364 428 7.91E-19 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 PIRSF PIRSF006809 3 423 1.2E-150 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 PANTHER PTHR10229:SF0 1 427 3.2E-186 T 22-04-2016 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.0E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.395 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VPUCM_RS14685 22f7b90acdbfb8ec806ed2c75ffb90c3 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.5E-156 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 SUPERFAMILY SSF56024 248 425 7.85E-27 T 22-04-2016 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 PIRSF PIRSF000850 2 446 6.4E-214 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 Gene3D G3DSA:3.30.870.10 20 181 1.7E-16 T 22-04-2016 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 Gene3D G3DSA:3.30.870.10 247 408 4.1E-21 T 22-04-2016 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 SUPERFAMILY SSF56024 14 181 6.02E-26 T 22-04-2016 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 PANTHER PTHR12586 9 445 2.6E-228 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 PANTHER PTHR12586:SF3 9 445 2.6E-228 T 22-04-2016 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 SMART SM00155 347 374 0.0078 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 SMART SM00155 126 152 7.7E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 Pfam PF13091 PLD-like domain 251 402 1.1E-25 T 22-04-2016 IPR025202 Phospholipase D-like domain VPUCM_RS15300 1140bab614493f8efd3e142e361ed8a5 446 Pfam PF13091 PLD-like domain 34 147 6.8E-7 T 22-04-2016 IPR025202 Phospholipase D-like domain VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.323 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 PANTHER PTHR23135:SF17 1 450 3.3E-296 T 22-04-2016 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 5.7E-260 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 Gene3D G3DSA:3.90.190.20 313 449 1.4E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 SUPERFAMILY SSF53623 97 308 1.7E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 3.7E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 SUPERFAMILY SSF51984 1 89 1.31E-22 T 22-04-2016 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 Gene3D G3DSA:3.40.50.720 1 90 1.3E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 3.1E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 PANTHER PTHR23135 1 450 3.3E-296 T 22-04-2016 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 SUPERFAMILY SSF53244 311 448 7.17E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 Gene3D G3DSA:3.40.1190.10 92 312 3.4E-87 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS01700 349ff5b0e0df2966aceac8ed6710d24f 452 Pfam PF08245 Mur ligase middle domain 108 291 7.1E-22 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 PANTHER PTHR11655 1 176 1.3E-88 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 Pfam PF00347 Ribosomal protein L6 91 164 1.0E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 Pfam PF00347 Ribosomal protein L6 11 82 2.7E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.3E-74 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 Gene3D G3DSA:3.90.930.12 2 82 4.8E-30 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 SUPERFAMILY SSF56053 83 177 9.68E-36 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.665 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 PIRSF PIRSF002162 1 177 1.2E-45 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 Gene3D G3DSA:3.90.930.12 83 177 1.7E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 SUPERFAMILY SSF56053 1 82 5.23E-25 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS01505 51526b9d4525cb8bb0791f4296c2a808 177 PANTHER PTHR11655:SF14 1 176 1.3E-88 T 22-04-2016 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 Pfam PF00593 TonB dependent receptor 543 864 6.6E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 PANTHER PTHR30069 6 761 1.2E-112 T 22-04-2016 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 169 1.3E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 SUPERFAMILY SSF56935 617 866 6.41E-97 T 22-04-2016 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 SUPERFAMILY SSF56935 300 572 6.41E-97 T 22-04-2016 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 SUPERFAMILY SSF56935 28 237 6.41E-97 T 22-04-2016 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 Gene3D G3DSA:2.40.170.20 173 232 1.5E-83 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 Gene3D G3DSA:2.40.170.20 282 866 1.5E-83 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 PANTHER PTHR30069:SF7 6 761 1.2E-112 T 22-04-2016 VPUCM_RS00845 5a17bed896c49e7f7e5e8d64328892e9 866 Gene3D G3DSA:2.170.130.10 29 172 8.5E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VPUCM_RS12970 f76a0dd491250c34052c7ba072bffbdf 256 Pfam PF01061 ABC-2 type transporter 8 218 2.2E-38 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 VPUCM_RS12970 f76a0dd491250c34052c7ba072bffbdf 256 PANTHER PTHR30413:SF2 3 256 1.8E-158 T 22-04-2016 VPUCM_RS12970 f76a0dd491250c34052c7ba072bffbdf 256 PIRSF PIRSF006648 5 253 2.7E-27 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS12970 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS12970 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS12970 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS12970 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS12970 f76a0dd491250c34052c7ba072bffbdf 256 PANTHER PTHR30413 3 256 1.8E-158 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 SUPERFAMILY SSF47729 1 90 3.39E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.8E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 Gene3D G3DSA:4.10.520.10 1 90 2.7E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 SMART SM00411 1 90 4.1E-44 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VPUCM_RS05140 84db6800118b3f1188e01ec53ac1d371 90 PANTHER PTHR33175 1 90 1.3E-45 T 22-04-2016 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.907 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 Pfam PF01632 Ribosomal protein L35 2 61 2.9E-21 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 6.2E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.2E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 6.2E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.9E-27 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 PANTHER PTHR33343 1 64 4.2E-26 T 22-04-2016 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 SUPERFAMILY SSF143034 2 63 1.96E-20 T 22-04-2016 VPUCM_RS09615 8b4ab027368fa78b8b2a5d859c90803e 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 PANTHER PTHR24960:SF43 88 244 3.3E-104 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 PANTHER PTHR24960:SF43 412 545 3.3E-104 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 Gene3D G3DSA:3.30.70.20 170 223 2.0E-13 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 Gene3D G3DSA:3.30.70.20 224 238 1.8E-20 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 Gene3D G3DSA:3.30.70.20 417 484 1.8E-20 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 PANTHER PTHR24960 88 244 3.3E-104 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 PANTHER PTHR24960 412 545 3.3E-104 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 SUPERFAMILY SSF54862 411 504 4.42E-38 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 SUPERFAMILY SSF54862 143 238 4.42E-38 T 22-04-2016 VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS07970 97aafb463f47f2406825a18f865ed0e6 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.4E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 8 74 5.2E-33 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 PANTHER PTHR13479 2 74 2.1E-35 T 22-04-2016 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14330 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 PANTHER PTHR21085 2 352 5.8E-224 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 Pfam PF01264 Chorismate synthase 10 345 6.9E-145 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 SUPERFAMILY SSF103263 4 354 2.09E-150 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.9E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.791 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 PIRSF PIRSF001456 3 360 6.1E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 Gene3D G3DSA:3.60.150.10 9 352 1.6E-163 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS11365 c4687aeaa5d16dd11646ad42b7cbe001 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS14020 40b6d7116783037688ee505f9ab82b89 250 Pfam PF00849 RNA pseudouridylate synthase 22 174 7.7E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS14020 40b6d7116783037688ee505f9ab82b89 250 PANTHER PTHR11079 3 242 7.8E-73 T 22-04-2016 VPUCM_RS14020 40b6d7116783037688ee505f9ab82b89 250 SUPERFAMILY SSF55120 7 221 1.6E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS14020 40b6d7116783037688ee505f9ab82b89 250 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 211 4.5E-58 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS14020 40b6d7116783037688ee505f9ab82b89 250 PANTHER PTHR11079:SF86 3 242 7.8E-73 T 22-04-2016 VPUCM_RS14020 40b6d7116783037688ee505f9ab82b89 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PANTHER PTHR30295:SF9 1 153 2.4E-54 T 22-04-2016 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 SUPERFAMILY SSF47240 1 153 2.92E-55 T 22-04-2016 IPR009078 Ferritin-like superfamily VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PIRSF PIRSF002560 1 157 4.4E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 Gene3D G3DSA:1.20.1260.10 1 155 4.0E-66 T 22-04-2016 IPR012347 Ferritin-related VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PANTHER PTHR30295 1 153 2.4E-54 T 22-04-2016 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 Pfam PF00210 Ferritin-like domain 8 143 1.6E-40 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 5.7E-82 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.3E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.3E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.3E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.3E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.3E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.3E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS14475 87e79bd117882599fe185f27550ea7e4 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.3E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 2.2E-46 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.9E-34 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.9E-34 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.9E-34 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.9E-34 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.9E-34 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.9E-34 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 SUPERFAMILY SSF52317 3 192 1.43E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PANTHER PTHR11922 1 189 8.2E-86 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 1.6E-54 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.1E-13 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.1E-13 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.1E-13 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.2E-5 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.2E-5 T 22-04-2016 VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 Gene3D G3DSA:3.40.50.880 3 190 3.6E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS06350 6dc790077710c4fca786b030e47fb68c 196 PANTHER PTHR11922:SF25 1 189 8.2E-86 T 22-04-2016 VPUCM_RS05420 45b41599a35a13cf00b5c5ba9d39c373 139 SMART SM00116 13 61 0.032 T 22-04-2016 IPR000644 CBS domain VPUCM_RS05420 45b41599a35a13cf00b5c5ba9d39c373 139 SMART SM00116 80 128 3.4E-9 T 22-04-2016 IPR000644 CBS domain VPUCM_RS05420 45b41599a35a13cf00b5c5ba9d39c373 139 SUPERFAMILY SSF54631 1 127 1.39E-31 T 22-04-2016 VPUCM_RS05420 45b41599a35a13cf00b5c5ba9d39c373 139 Pfam PF00571 CBS domain 6 61 4.3E-7 T 22-04-2016 IPR000644 CBS domain VPUCM_RS05420 45b41599a35a13cf00b5c5ba9d39c373 139 Pfam PF00571 CBS domain 73 127 1.6E-13 T 22-04-2016 IPR000644 CBS domain VPUCM_RS05420 45b41599a35a13cf00b5c5ba9d39c373 139 Gene3D G3DSA:3.10.580.10 1 133 3.4E-31 T 22-04-2016 VPUCM_RS05420 45b41599a35a13cf00b5c5ba9d39c373 139 PANTHER PTHR11911 1 127 3.3E-21 T 22-04-2016 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 SUPERFAMILY SSF63380 1 89 1.79E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 Pfam PF00677 Lumazine binding domain 100 184 1.3E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 Pfam PF00677 Lumazine binding domain 3 87 5.3E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 PANTHER PTHR21098 1 217 1.9E-103 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 SUPERFAMILY SSF63380 93 198 6.12E-33 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 3.4E-67 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 PIRSF PIRSF000498 1 211 1.5E-80 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 Gene3D G3DSA:2.40.30.20 105 195 8.7E-33 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS12705 7d12f137d212f43f2113c963264973f1 217 Gene3D G3DSA:2.40.30.20 5 104 1.0E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 1.9E-49 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 PANTHER PTHR31223 83 339 4.0E-173 T 22-04-2016 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 PANTHER PTHR31223 356 381 4.0E-173 T 22-04-2016 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 SUPERFAMILY SSF102405 119 327 1.83E-42 T 22-04-2016 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 Gene3D G3DSA:3.40.50.450 123 450 7.3E-124 T 22-04-2016 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 9.2E-56 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 PANTHER PTHR31223:SF12 83 339 4.0E-173 T 22-04-2016 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 PANTHER PTHR31223:SF12 356 381 4.0E-173 T 22-04-2016 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 Gene3D G3DSA:3.30.1850.10 1 113 6.7E-56 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 VPUCM_RS12615 cc5d82f8e40c421bfe37158cc6e968b9 453 Pfam PF03641 Possible lysine decarboxylase 187 326 1.8E-35 T 22-04-2016 IPR031100 LOG family VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.1E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 3.2E-75 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 PANTHER PTHR30194 1 169 6.7E-72 T 22-04-2016 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.719 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 Gene3D G3DSA:3.30.420.10 3 156 2.4E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.1E-62 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VPUCM_RS10745 2c0382581621e507e023296c10ab5b42 173 SUPERFAMILY SSF53098 3 156 5.31E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS09185 12bffde383e41e951ebb68cb852eec57 338 PANTHER PTHR12112 33 338 4.9E-58 T 22-04-2016 VPUCM_RS09185 12bffde383e41e951ebb68cb852eec57 338 SMART SM01131 208 335 4.6E-41 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VPUCM_RS09185 12bffde383e41e951ebb68cb852eec57 338 PANTHER PTHR12112:SF17 33 338 4.9E-58 T 22-04-2016 VPUCM_RS09185 12bffde383e41e951ebb68cb852eec57 338 Pfam PF01368 DHH family 37 169 6.2E-12 T 22-04-2016 IPR001667 DDH domain VPUCM_RS09185 12bffde383e41e951ebb68cb852eec57 338 SUPERFAMILY SSF64182 33 335 5.89E-55 T 22-04-2016 VPUCM_RS09185 12bffde383e41e951ebb68cb852eec57 338 Gene3D G3DSA:3.90.1640.10 33 212 1.0E-35 T 22-04-2016 VPUCM_RS09185 12bffde383e41e951ebb68cb852eec57 338 Pfam PF02833 DHHA2 domain 210 334 7.8E-21 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VPUCM_RS13265 bb6a90c009c5f6ae351f3bc642bc32eb 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 37.013 T 22-04-2016 IPR023081 Cell division protein FtsB VPUCM_RS13265 bb6a90c009c5f6ae351f3bc642bc32eb 93 PANTHER PTHR37485 2 92 6.8E-45 T 22-04-2016 VPUCM_RS13265 bb6a90c009c5f6ae351f3bc642bc32eb 93 PANTHER PTHR37485:SF1 2 92 6.8E-45 T 22-04-2016 VPUCM_RS13265 bb6a90c009c5f6ae351f3bc642bc32eb 93 Pfam PF04977 Septum formation initiator 11 89 9.1E-30 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 VPUCM_RS13570 3e580b2f8c1dbeb253f5c3ee67494288 239 PANTHER PTHR23417:SF14 16 237 4.0E-86 T 22-04-2016 VPUCM_RS13570 3e580b2f8c1dbeb253f5c3ee67494288 239 PANTHER PTHR23417 16 237 4.0E-86 T 22-04-2016 VPUCM_RS13570 3e580b2f8c1dbeb253f5c3ee67494288 239 Gene3D G3DSA:3.40.50.150 61 194 1.6E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13570 3e580b2f8c1dbeb253f5c3ee67494288 239 SUPERFAMILY SSF53335 16 238 2.39E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS13570 3e580b2f8c1dbeb253f5c3ee67494288 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.683 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VPUCM_RS13570 3e580b2f8c1dbeb253f5c3ee67494288 239 Pfam PF02390 Putative methyltransferase 62 232 2.4E-58 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VPUCM_RS13570 3e580b2f8c1dbeb253f5c3ee67494288 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 7.4E-67 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VPUCM_RS01435 2d175bb8a55ff69ba74ee7ff553af54c 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.4E-76 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VPUCM_RS01435 2d175bb8a55ff69ba74ee7ff553af54c 200 PANTHER PTHR10746 10 199 1.4E-92 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VPUCM_RS01435 2d175bb8a55ff69ba74ee7ff553af54c 200 SUPERFAMILY SSF52166 9 199 4.06E-73 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01435 2d175bb8a55ff69ba74ee7ff553af54c 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01435 2d175bb8a55ff69ba74ee7ff553af54c 200 Gene3D G3DSA:3.40.1370.10 52 200 9.8E-60 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01435 2d175bb8a55ff69ba74ee7ff553af54c 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.872 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VPUCM_RS09895 e17fd3cea2daff38256cdd8940a3fed0 223 PANTHER PTHR24220 3 217 5.0E-102 T 22-04-2016 VPUCM_RS09895 e17fd3cea2daff38256cdd8940a3fed0 223 Pfam PF00005 ABC transporter 21 167 6.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS09895 e17fd3cea2daff38256cdd8940a3fed0 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS09895 e17fd3cea2daff38256cdd8940a3fed0 223 SUPERFAMILY SSF52540 1 217 2.23E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09895 e17fd3cea2daff38256cdd8940a3fed0 223 SMART SM00382 30 218 5.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS09895 e17fd3cea2daff38256cdd8940a3fed0 223 Gene3D G3DSA:3.40.50.300 1 217 7.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09895 e17fd3cea2daff38256cdd8940a3fed0 223 PANTHER PTHR24220:SF430 3 217 5.0E-102 T 22-04-2016 VPUCM_RS00500 b10bf7dcbdb9e1d89d489f8d94b24c3c 211 Gene3D G3DSA:3.30.1050.10 32 116 5.1E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VPUCM_RS00500 b10bf7dcbdb9e1d89d489f8d94b24c3c 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.1E-23 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VPUCM_RS00500 b10bf7dcbdb9e1d89d489f8d94b24c3c 211 PANTHER PTHR38693:SF1 1 205 5.4E-68 T 22-04-2016 VPUCM_RS00500 b10bf7dcbdb9e1d89d489f8d94b24c3c 211 SUPERFAMILY SSF55718 15 117 3.53E-11 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VPUCM_RS00500 b10bf7dcbdb9e1d89d489f8d94b24c3c 211 PANTHER PTHR38693 1 205 5.4E-68 T 22-04-2016 VPUCM_RS09465 3076024723039e745f44502b81c828fb 191 Gene3D G3DSA:1.10.3420.10 12 127 3.7E-17 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VPUCM_RS09465 3076024723039e745f44502b81c828fb 191 Gene3D G3DSA:1.10.3420.10 166 189 3.7E-17 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VPUCM_RS09465 3076024723039e745f44502b81c828fb 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 3.6E-7 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VPUCM_RS05160 4f228e0b61bce212f1fac89623ba790d 204 SMART SM01144 1 193 5.9E-70 T 22-04-2016 IPR005636 DTW VPUCM_RS05160 4f228e0b61bce212f1fac89623ba790d 204 PANTHER PTHR21392 1 192 4.8E-51 T 22-04-2016 VPUCM_RS05160 4f228e0b61bce212f1fac89623ba790d 204 Pfam PF03942 DTW domain 3 188 8.7E-51 T 22-04-2016 IPR005636 DTW VPUCM_RS01360 b95a25f5633231d84fc45f61a1898b84 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 4.9E-20 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 VPUCM_RS01360 b95a25f5633231d84fc45f61a1898b84 140 PANTHER PTHR34980 1 140 3.9E-24 T 22-04-2016 VPUCM_RS01360 b95a25f5633231d84fc45f61a1898b84 140 PANTHER PTHR34980:SF1 1 140 3.9E-24 T 22-04-2016 VPUCM_RS14495 22b181e49096b7a6182d907e0a8aa392 156 PIRSF PIRSF002122 3 156 2.0E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VPUCM_RS14495 22b181e49096b7a6182d907e0a8aa392 156 SUPERFAMILY SSF47973 6 149 5.36E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VPUCM_RS14495 22b181e49096b7a6182d907e0a8aa392 156 Gene3D G3DSA:1.10.455.10 8 156 4.1E-69 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VPUCM_RS14495 22b181e49096b7a6182d907e0a8aa392 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.4E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14495 22b181e49096b7a6182d907e0a8aa392 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 VPUCM_RS14495 22b181e49096b7a6182d907e0a8aa392 156 PANTHER PTHR11205 1 156 2.2E-93 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VPUCM_RS14495 22b181e49096b7a6182d907e0a8aa392 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.2E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VPUCM_RS14495 22b181e49096b7a6182d907e0a8aa392 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.04 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VPUCM_RS10625 263c8052a69e98bd85e99c1912ddeb8c 695 PANTHER PTHR30441:SF4 1 695 6.0E-195 T 22-04-2016 VPUCM_RS10625 263c8052a69e98bd85e99c1912ddeb8c 695 PANTHER PTHR30441 1 695 6.0E-195 T 22-04-2016 VPUCM_RS10625 263c8052a69e98bd85e99c1912ddeb8c 695 Pfam PF05170 AsmA family 1 585 3.7E-116 T 22-04-2016 IPR007844 AsmA VPUCM_RS15410 cd9ea9ac91023641a9fb6a6f5b846ed2 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 1.8E-34 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VPUCM_RS15410 cd9ea9ac91023641a9fb6a6f5b846ed2 280 Gene3D G3DSA:1.20.1540.10 97 268 2.6E-30 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VPUCM_RS15410 cd9ea9ac91023641a9fb6a6f5b846ed2 280 PANTHER PTHR22936:SF30 1 271 4.4E-83 T 22-04-2016 VPUCM_RS15410 cd9ea9ac91023641a9fb6a6f5b846ed2 280 SUPERFAMILY SSF144091 96 271 8.37E-40 T 22-04-2016 VPUCM_RS15410 cd9ea9ac91023641a9fb6a6f5b846ed2 280 Pfam PF01694 Rhomboid family 134 270 1.4E-30 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VPUCM_RS15410 cd9ea9ac91023641a9fb6a6f5b846ed2 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 1.1E-115 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VPUCM_RS15410 cd9ea9ac91023641a9fb6a6f5b846ed2 280 PANTHER PTHR22936 1 271 4.4E-83 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VPUCM_RS07955 ab66ad55c43f93c4b9b10f6666d56c73 277 Gene3D G3DSA:3.40.140.10 132 271 1.1E-52 T 22-04-2016 VPUCM_RS07955 ab66ad55c43f93c4b9b10f6666d56c73 277 PIRSF PIRSF015626 2 271 9.1E-98 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 VPUCM_RS07955 ab66ad55c43f93c4b9b10f6666d56c73 277 PANTHER PTHR30592 1 277 1.8E-180 T 22-04-2016 VPUCM_RS07955 ab66ad55c43f93c4b9b10f6666d56c73 277 Pfam PF02634 FdhD/NarQ family 35 266 2.8E-73 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 VPUCM_RS07955 ab66ad55c43f93c4b9b10f6666d56c73 277 Gene3D G3DSA:3.10.20.10 36 118 7.7E-16 T 22-04-2016 VPUCM_RS07955 ab66ad55c43f93c4b9b10f6666d56c73 277 PANTHER PTHR30592:SF2 1 277 1.8E-180 T 22-04-2016 VPUCM_RS07955 ab66ad55c43f93c4b9b10f6666d56c73 277 SUPERFAMILY SSF53927 15 266 2.05E-70 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SUPERFAMILY SSF52172 667 784 1.24E-35 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SUPERFAMILY SSF47226 764 777 2.75E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SUPERFAMILY SSF47226 819 919 2.75E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Gene3D G3DSA:1.20.120.160 831 931 1.3E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PANTHER PTHR24423:SF540 269 571 2.7E-182 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PANTHER PTHR24423:SF540 192 230 2.7E-182 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PANTHER PTHR24423:SF540 6 20 2.7E-182 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PANTHER PTHR24423:SF540 667 833 2.7E-182 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Gene3D G3DSA:3.30.565.10 356 521 2.7E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SUPERFAMILY SSF55874 344 516 1.1E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Gene3D G3DSA:3.40.50.2300 533 643 6.0E-5 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SMART SM00304 198 250 3.1E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Pfam PF00672 HAMP domain 179 246 1.4E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SMART SM00388 290 355 2.9E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Pfam PF01627 Hpt domain 840 919 6.1E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.4E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Gene3D G3DSA:1.10.287.130 282 351 1.8E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SMART SM00387 402 518 3.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SMART SM00073 829 927 1.3E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PANTHER PTHR24423 269 571 2.7E-182 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PANTHER PTHR24423 192 230 2.7E-182 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PANTHER PTHR24423 6 20 2.7E-182 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 PANTHER PTHR24423 667 833 2.7E-182 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 22-04-2016 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.9E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SMART SM00448 668 781 7.7E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Pfam PF00072 Response regulator receiver domain 670 780 9.7E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 SUPERFAMILY SSF52172 533 644 2.64E-8 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 7.5E-53 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal VPUCM_RS13295 92db6d5a5478bbf991ded2344878c4b2 932 Gene3D G3DSA:3.40.50.2300 667 784 1.6E-39 T 22-04-2016 VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 37 316 1.3E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 Gene3D G3DSA:3.40.50.720 4 110 1.1E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 SUPERFAMILY SSF51735 103 290 3.95E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 1.1E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 Gene3D G3DSA:3.40.50.720 111 289 4.8E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 PANTHER PTHR10996 34 316 5.8E-101 T 22-04-2016 VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VPUCM_RS14015 e1dd44d88d5a54980d844b0aa37065ca 320 SUPERFAMILY SSF52283 4 139 3.97E-33 T 22-04-2016 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 Gene3D G3DSA:3.40.50.2300 58 166 2.6E-49 T 22-04-2016 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 PANTHER PTHR30146:SF55 1 331 4.7E-176 T 22-04-2016 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.1E-37 T 22-04-2016 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 SMART SM00354 1 71 2.1E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 Gene3D G3DSA:1.10.260.40 2 57 4.2E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 SUPERFAMILY SSF53822 61 330 2.94E-83 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 PANTHER PTHR30146 1 331 4.7E-176 T 22-04-2016 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 SUPERFAMILY SSF47413 1 60 6.28E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS04260 8806f4447a48151643b99ca29c528979 332 Gene3D G3DSA:3.40.50.2300 167 330 1.4E-53 T 22-04-2016 VPUCM_RS07085 eff28a94724dfc11d74afb5f5cc86b34 148 Gene3D G3DSA:3.40.630.30 19 123 1.4E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07085 eff28a94724dfc11d74afb5f5cc86b34 148 SUPERFAMILY SSF55729 13 146 1.06E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07085 eff28a94724dfc11d74afb5f5cc86b34 148 PANTHER PTHR23091 1 131 3.8E-20 T 22-04-2016 VPUCM_RS07085 eff28a94724dfc11d74afb5f5cc86b34 148 Pfam PF13508 Acetyltransferase (GNAT) domain 35 114 1.1E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS07085 eff28a94724dfc11d74afb5f5cc86b34 148 PANTHER PTHR23091:SF226 1 131 3.8E-20 T 22-04-2016 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 SUPERFAMILY SSF69742 1 156 5.62E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 PANTHER PTHR21089 270 357 3.6E-141 T 22-04-2016 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 PANTHER PTHR21089 67 254 3.6E-141 T 22-04-2016 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 1.1E-143 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 6.3E-24 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.719 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 SUPERFAMILY SSF51735 160 313 1.15E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 4.5E-50 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 SUPERFAMILY SSF69075 315 416 3.66E-29 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 Gene3D G3DSA:3.40.50.720 181 356 9.3E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 PANTHER PTHR21089:SF3 270 357 3.6E-141 T 22-04-2016 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 PANTHER PTHR21089:SF3 67 254 3.6E-141 T 22-04-2016 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.9E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12300 a97e8bd9bb19d8292266146b0a662f1a 418 PIRSF PIRSF000445 1 418 9.0E-157 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS06945 dc8a4a5c87207607890b1b169efde54e 137 SUPERFAMILY SSF54593 9 133 3.85E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS06945 dc8a4a5c87207607890b1b169efde54e 137 PANTHER PTHR36437 2 134 9.7E-69 T 22-04-2016 VPUCM_RS06945 dc8a4a5c87207607890b1b169efde54e 137 PANTHER PTHR36437:SF2 2 134 9.7E-69 T 22-04-2016 VPUCM_RS06945 dc8a4a5c87207607890b1b169efde54e 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 2.3E-11 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VPUCM_RS06945 dc8a4a5c87207607890b1b169efde54e 137 Gene3D G3DSA:3.10.180.10 12 131 1.8E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS02190 22e5d3233bf77fb2f01aecd7f2ad689a 155 PANTHER PTHR37486 2 155 3.0E-78 T 22-04-2016 VPUCM_RS02190 22e5d3233bf77fb2f01aecd7f2ad689a 155 Gene3D G3DSA:2.30.30.220 4 110 2.5E-52 T 22-04-2016 IPR007481 Stringent starvation protein B VPUCM_RS02190 22e5d3233bf77fb2f01aecd7f2ad689a 155 PIRSF PIRSF005276 3 155 4.0E-64 T 22-04-2016 IPR007481 Stringent starvation protein B VPUCM_RS02190 22e5d3233bf77fb2f01aecd7f2ad689a 155 PANTHER PTHR37486:SF1 2 155 3.0E-78 T 22-04-2016 VPUCM_RS02190 22e5d3233bf77fb2f01aecd7f2ad689a 155 SUPERFAMILY SSF101738 4 119 3.4E-50 T 22-04-2016 IPR007481 Stringent starvation protein B VPUCM_RS02190 22e5d3233bf77fb2f01aecd7f2ad689a 155 Pfam PF04386 Stringent starvation protein B 9 155 8.0E-43 T 22-04-2016 IPR007481 Stringent starvation protein B VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 Pfam PF05593 RHS Repeat 422 447 3.3E-5 T 22-04-2016 IPR031325 RHS repeat VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PANTHER PTHR32305:SF6 587 1130 1.6E-70 T 22-04-2016 VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PANTHER PTHR32305:SF6 312 372 1.6E-70 T 22-04-2016 VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PANTHER PTHR32305:SF6 415 567 1.6E-70 T 22-04-2016 VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1066 1130 3.3E-26 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PANTHER PTHR32305 587 1130 1.6E-70 T 22-04-2016 VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PANTHER PTHR32305 312 372 1.6E-70 T 22-04-2016 VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PANTHER PTHR32305 415 567 1.6E-70 T 22-04-2016 VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 Pfam PF03527 RHS protein 1030 1061 9.0E-11 T 22-04-2016 IPR001826 RHS protein VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 421 461 6.2E-5 T 22-04-2016 IPR006530 YD repeat VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 463 500 5.8E-6 T 22-04-2016 IPR006530 YD repeat VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 505 546 0.0028 T 22-04-2016 IPR006530 YD repeat VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PRINTS PR00394 RHS protein signature 1099 1118 1.2E-10 T 22-04-2016 IPR001826 RHS protein VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PRINTS PR00394 RHS protein signature 1076 1096 1.2E-10 T 22-04-2016 IPR001826 RHS protein VPUCM_RS08005 76d25971b554bdf0bb678de02c25131f 1458 PRINTS PR00394 RHS protein signature 1023 1043 1.2E-10 T 22-04-2016 IPR001826 RHS protein VPUCM_RS15545 d1ab88b745f982247aca8ed683af13d8 204 PANTHER PTHR21392 5 204 1.2E-42 T 22-04-2016 VPUCM_RS15545 d1ab88b745f982247aca8ed683af13d8 204 SMART SM01144 1 192 2.2E-53 T 22-04-2016 IPR005636 DTW VPUCM_RS15545 d1ab88b745f982247aca8ed683af13d8 204 Pfam PF03942 DTW domain 5 183 1.1E-42 T 22-04-2016 IPR005636 DTW VPUCM_RS15545 d1ab88b745f982247aca8ed683af13d8 204 PANTHER PTHR21392:SF1 5 204 1.2E-42 T 22-04-2016 VPUCM_RS13980 ca892d7100e074bdc15d0186497f0e86 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 8.0E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPUCM_RS13980 ca892d7100e074bdc15d0186497f0e86 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.6E-34 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPUCM_RS13980 ca892d7100e074bdc15d0186497f0e86 95 SUPERFAMILY SSF69754 1 95 4.05E-35 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPUCM_RS13980 ca892d7100e074bdc15d0186497f0e86 95 PANTHER PTHR33231 1 95 7.6E-42 T 22-04-2016 VPUCM_RS13980 ca892d7100e074bdc15d0186497f0e86 95 Gene3D G3DSA:3.30.160.100 1 95 2.5E-38 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPUCM_RS00640 f413e2836e9f1a11c29ce6ead6552026 684 Pfam PF05170 AsmA family 1 569 2.1E-178 T 22-04-2016 IPR007844 AsmA VPUCM_RS08055 e3cdd88be60f8c7a4e07a6944399aa4b 293 Pfam PF15575 Immunity protein 49 72 277 3.6E-43 T 22-04-2016 IPR029074 Immunity protein 49 VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 6.0E-10 T 22-04-2016 IPR020476 NUDIX hydrolase VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 6.0E-10 T 22-04-2016 IPR020476 NUDIX hydrolase VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 Pfam PF00293 NUDIX domain 7 125 6.8E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 1.1E-43 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 PANTHER PTHR22769:SF36 1 130 1.7E-39 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 Gene3D G3DSA:3.90.79.10 3 129 3.1E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 PANTHER PTHR22769 1 130 1.7E-39 T 22-04-2016 VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 SUPERFAMILY SSF55811 1 127 1.22E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS02300 3ab4e0a97829270769d5d2ec48000d47 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VPUCM_RS05090 adbe88c13d6206c8c6b7aead584e02f7 224 PANTHER PTHR35011 1 129 7.4E-77 T 22-04-2016 VPUCM_RS05090 adbe88c13d6206c8c6b7aead584e02f7 224 PANTHER PTHR35011 152 202 7.4E-77 T 22-04-2016 VPUCM_RS05090 adbe88c13d6206c8c6b7aead584e02f7 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 1.0E-26 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VPUCM_RS05090 adbe88c13d6206c8c6b7aead584e02f7 224 PANTHER PTHR35011:SF1 1 129 7.4E-77 T 22-04-2016 VPUCM_RS05090 adbe88c13d6206c8c6b7aead584e02f7 224 PANTHER PTHR35011:SF1 152 202 7.4E-77 T 22-04-2016 VPUCM_RS02195 ea84084217c7b181c4d4d6b97fb565b9 229 Pfam PF04972 BON domain 120 185 2.2E-16 T 22-04-2016 IPR007055 BON domain VPUCM_RS02195 ea84084217c7b181c4d4d6b97fb565b9 229 Pfam PF04972 BON domain 44 110 4.6E-13 T 22-04-2016 IPR007055 BON domain VPUCM_RS02195 ea84084217c7b181c4d4d6b97fb565b9 229 PANTHER PTHR34606:SF4 1 185 2.5E-72 T 22-04-2016 VPUCM_RS02195 ea84084217c7b181c4d4d6b97fb565b9 229 SMART SM00749 125 188 0.0033 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VPUCM_RS02195 ea84084217c7b181c4d4d6b97fb565b9 229 SMART SM00749 48 111 33.0 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VPUCM_RS02195 ea84084217c7b181c4d4d6b97fb565b9 229 PANTHER PTHR34606 1 185 2.5E-72 T 22-04-2016 VPUCM_RS03580 dcd0202be1d14af220660ab341463a46 189 Gene3D G3DSA:2.60.40.790 40 181 6.5E-46 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS03580 dcd0202be1d14af220660ab341463a46 189 Pfam PF00011 Hsp20/alpha crystallin family 85 188 9.7E-28 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VPUCM_RS03580 dcd0202be1d14af220660ab341463a46 189 PANTHER PTHR11527 46 189 2.3E-41 T 22-04-2016 IPR031107 Small heat shock protein HSP20 VPUCM_RS03580 dcd0202be1d14af220660ab341463a46 189 SUPERFAMILY SSF49764 49 181 5.65E-40 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS13830 d38ce83707d381799b609a09c03a0b8d 266 SUPERFAMILY SSF49785 2 149 2.72E-17 T 22-04-2016 IPR008979 Galactose-binding domain-like VPUCM_RS13830 d38ce83707d381799b609a09c03a0b8d 266 Gene3D G3DSA:2.60.120.260 43 121 8.6E-6 T 22-04-2016 IPR008979 Galactose-binding domain-like VPUCM_RS14120 2754dfcea23aa7a9ed21e67f159ae7f9 407 PANTHER PTHR30012:SF4 2 405 1.2E-242 T 22-04-2016 VPUCM_RS14120 2754dfcea23aa7a9ed21e67f159ae7f9 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.9E-9 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS14120 2754dfcea23aa7a9ed21e67f159ae7f9 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.9E-9 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS14120 2754dfcea23aa7a9ed21e67f159ae7f9 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.9E-9 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS14120 2754dfcea23aa7a9ed21e67f159ae7f9 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.9E-9 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS14120 2754dfcea23aa7a9ed21e67f159ae7f9 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.4E-30 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS14120 2754dfcea23aa7a9ed21e67f159ae7f9 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 9.3E-27 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS14120 2754dfcea23aa7a9ed21e67f159ae7f9 407 PANTHER PTHR30012 2 405 1.2E-242 T 22-04-2016 VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 SUPERFAMILY SSF53901 1 251 4.32E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 SUPERFAMILY SSF53901 213 401 1.38E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 Gene3D G3DSA:3.40.47.10 261 402 9.0E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.0E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 PANTHER PTHR11712 1 401 6.6E-176 T 22-04-2016 VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 1.3E-27 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 Gene3D G3DSA:3.40.47.10 6 257 8.6E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11335 b877593ce5c9f069bb1f371b15bc6378 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.2E-46 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VPUCM_RS00005 3f84ea9446a3170fb57841738bb26a15 144 PANTHER PTHR19384 2 144 6.0E-29 T 22-04-2016 VPUCM_RS00005 3f84ea9446a3170fb57841738bb26a15 144 Gene3D G3DSA:3.40.50.360 2 142 4.6E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS00005 3f84ea9446a3170fb57841738bb26a15 144 Pfam PF00258 Flavodoxin 4 136 7.8E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VPUCM_RS00005 3f84ea9446a3170fb57841738bb26a15 144 PANTHER PTHR19384:SF81 2 144 6.0E-29 T 22-04-2016 VPUCM_RS00005 3f84ea9446a3170fb57841738bb26a15 144 SUPERFAMILY SSF52218 2 142 1.54E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 Gene3D G3DSA:3.20.20.70 1 347 5.8E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.4E-29 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 SUPERFAMILY SSF110921 393 498 3.01E-20 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 Pfam PF00682 HMGL-like 4 273 2.6E-100 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 SMART SM00917 369 499 2.0E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 PANTHER PTHR10277 1 507 1.0E-248 T 22-04-2016 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 SUPERFAMILY SSF51569 1 291 3.11E-100 T 22-04-2016 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.274 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 2.9E-237 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 PANTHER PTHR10277:SF9 1 507 1.0E-248 T 22-04-2016 VPUCM_RS01845 d68b14ec801f5df7f773c710fd2b7e75 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VPUCM_RS04985 4423de01bb5cb3f1fd82cd5556228fdd 517 Gene3D G3DSA:1.10.275.10 3 203 4.0E-65 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VPUCM_RS04985 4423de01bb5cb3f1fd82cd5556228fdd 517 PANTHER PTHR10362:SF7 9 512 2.5E-184 T 22-04-2016 VPUCM_RS04985 4423de01bb5cb3f1fd82cd5556228fdd 517 Pfam PF00221 Aromatic amino acid lyase 16 469 5.2E-164 T 22-04-2016 IPR001106 Aromatic amino acid lyase VPUCM_RS04985 4423de01bb5cb3f1fd82cd5556228fdd 517 PANTHER PTHR10362 9 512 2.5E-184 T 22-04-2016 VPUCM_RS04985 4423de01bb5cb3f1fd82cd5556228fdd 517 SUPERFAMILY SSF48557 5 513 2.59E-172 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VPUCM_RS04985 4423de01bb5cb3f1fd82cd5556228fdd 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VPUCM_RS04985 4423de01bb5cb3f1fd82cd5556228fdd 517 Gene3D G3DSA:1.20.200.10 204 511 1.3E-101 T 22-04-2016 VPUCM_RS10585 d1a29f63b69484c7b27289e3e045f618 56 PANTHER PTHR35534 1 56 1.3E-27 T 22-04-2016 VPUCM_RS10585 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VPUCM_RS10585 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VPUCM_RS10585 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VPUCM_RS10585 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VPUCM_RS08645 3e624fc2d75ff1c82c8794e910b5cd2b 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 94 7.0E-43 T 22-04-2016 IPR009863 Type III secretion protein, LcrG VPUCM_RS08645 3e624fc2d75ff1c82c8794e910b5cd2b 94 Pfam PF07216 LcrG protein 1 94 1.6E-42 T 22-04-2016 IPR009863 Type III secretion protein, LcrG VPUCM_RS08645 3e624fc2d75ff1c82c8794e910b5cd2b 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 94 3.0E-30 T 22-04-2016 IPR009863 Type III secretion protein, LcrG VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 6.1E-29 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 4.7E-102 T 22-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 PANTHER PTHR22807:SF38 5 367 2.2E-218 T 22-04-2016 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 7.7E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 SUPERFAMILY SSF53335 7 308 8.92E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 1.5E-49 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 PANTHER PTHR22807 5 367 2.2E-218 T 22-04-2016 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 473 1.1E-9 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 Gene3D G3DSA:3.40.50.150 100 308 1.5E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08405 2121646b1cb3107a4d65e62ec8df6049 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 65.857 T 22-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS12640 62decb04d734aac706c1cb552c33fd21 207 SUPERFAMILY SSF53474 6 202 9.83E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS12640 62decb04d734aac706c1cb552c33fd21 207 PANTHER PTHR13136:SF4 17 200 2.1E-51 T 22-04-2016 VPUCM_RS12640 62decb04d734aac706c1cb552c33fd21 207 PANTHER PTHR13136 17 200 2.1E-51 T 22-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein VPUCM_RS12640 62decb04d734aac706c1cb552c33fd21 207 Gene3D G3DSA:3.40.50.1820 11 179 3.0E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS12640 62decb04d734aac706c1cb552c33fd21 207 Pfam PF12697 Alpha/beta hydrolase family 15 132 3.5E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 PANTHER PTHR11935:SF7 2 252 2.7E-96 T 22-04-2016 VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 SUPERFAMILY SSF56281 2 252 9.96E-70 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 PIRSF PIRSF005457 1 252 6.0E-99 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.7E-103 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 Gene3D G3DSA:3.60.15.10 4 252 1.2E-85 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 2.4E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.466 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 1.6E-26 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 SMART SM00849 12 166 2.2E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase VPUCM_RS04745 2b11ab47a26f662613e9d2f96e215a31 252 PANTHER PTHR11935 2 252 2.7E-96 T 22-04-2016 VPUCM_RS15910 73f392b1e93429558c988502ab1d7faa 217 Pfam PF03006 Haemolysin-III related 10 207 4.0E-39 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VPUCM_RS15910 73f392b1e93429558c988502ab1d7faa 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 213 3.6E-69 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VPUCM_RS15910 73f392b1e93429558c988502ab1d7faa 217 PANTHER PTHR20855 8 217 1.3E-74 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VPUCM_RS15910 73f392b1e93429558c988502ab1d7faa 217 PANTHER PTHR20855:SF3 8 217 1.3E-74 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 Gene3D G3DSA:1.10.10.10 11 80 5.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 SUPERFAMILY SSF53067 86 395 1.2E-54 T 22-04-2016 VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 Gene3D G3DSA:3.30.420.40 224 375 3.8E-53 T 22-04-2016 VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 22-04-2016 IPR000600 ROK family VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 PANTHER PTHR18964:SF128 65 402 4.2E-178 T 22-04-2016 VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 Pfam PF00480 ROK family 88 390 3.6E-70 T 22-04-2016 IPR000600 ROK family VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 Gene3D G3DSA:3.30.420.40 84 223 4.9E-34 T 22-04-2016 VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 SUPERFAMILY SSF46785 10 76 3.58E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS10490 6042ed8bc57f52df540d359dc0ca19cb 405 PANTHER PTHR18964 65 402 4.2E-178 T 22-04-2016 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 Gene3D G3DSA:3.30.70.940 1 99 4.9E-21 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 SUPERFAMILY SSF50104 115 163 6.22E-6 T 22-04-2016 IPR008991 Translation protein SH3-like domain VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 Gene3D G3DSA:2.30.30.30 115 161 3.0E-6 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 Pfam PF02357 Transcription termination factor nusG 2 94 3.2E-20 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 1.2E-62 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.907 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 SMART SM00738 1 101 1.5E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 PANTHER PTHR30265 1 162 8.1E-46 T 22-04-2016 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 SUPERFAMILY SSF82679 1 101 3.92E-29 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VPUCM_RS11900 7d0d1d5b687414fd5ddc4abb98955b0a 166 PANTHER PTHR30265:SF3 1 162 8.1E-46 T 22-04-2016 VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 PANTHER PTHR38038 1 599 9.6E-164 T 22-04-2016 VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 29.842 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 PANTHER PTHR38038:SF1 1 599 9.6E-164 T 22-04-2016 VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 Pfam PF04348 LppC putative lipoprotein 40 599 6.0E-162 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 Gene3D G3DSA:3.40.50.2300 369 532 6.3E-48 T 22-04-2016 VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 SUPERFAMILY SSF53822 456 599 1.37E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 SUPERFAMILY SSF53822 260 428 1.37E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 Gene3D G3DSA:3.40.50.2300 533 596 6.8E-53 T 22-04-2016 VPUCM_RS02210 867b0450885958fa9bafe5582ea9a11e 603 Gene3D G3DSA:3.40.50.2300 256 368 6.8E-53 T 22-04-2016 VPUCM_RS00510 3e08bbbbafa9e1e06f392625aabd8b29 81 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 25.252 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VPUCM_RS00510 3e08bbbbafa9e1e06f392625aabd8b29 81 PANTHER PTHR33162 1 81 4.3E-22 T 22-04-2016 VPUCM_RS00510 3e08bbbbafa9e1e06f392625aabd8b29 81 Pfam PF02416 mttA/Hcf106 family 4 55 6.6E-14 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VPUCM_RS00510 3e08bbbbafa9e1e06f392625aabd8b29 81 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.5E-21 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VPUCM_RS06310 c574878403bf18b7e8274b31bfd6822a 393 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 183 385 3.0E-119 T 22-04-2016 IPR020384 Homoserine lactone synthase, LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VPUCM_RS06310 c574878403bf18b7e8274b31bfd6822a 393 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 157 2.0E-85 T 22-04-2016 IPR020374 Homoserine lactone synthase, LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VPUCM_RS15940 5bf0c2857c224bcb165fbc0baeb50b3c 292 Pfam PF01553 Acyltransferase 72 226 9.4E-17 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS15940 5bf0c2857c224bcb165fbc0baeb50b3c 292 SMART SM00563 85 227 2.5E-19 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS15940 5bf0c2857c224bcb165fbc0baeb50b3c 292 PANTHER PTHR10983 1 292 8.8E-137 T 22-04-2016 VPUCM_RS15940 5bf0c2857c224bcb165fbc0baeb50b3c 292 SUPERFAMILY SSF69593 52 289 7.45E-27 T 22-04-2016 VPUCM_RS15940 5bf0c2857c224bcb165fbc0baeb50b3c 292 PANTHER PTHR10983:SF15 1 292 8.8E-137 T 22-04-2016 VPUCM_RS03895 5d7d52c12856dd8a4606809904327ebd 659 SUPERFAMILY SSF116726 577 652 1.96E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS03895 5d7d52c12856dd8a4606809904327ebd 659 Gene3D G3DSA:3.40.50.720 406 536 3.6E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS03895 5d7d52c12856dd8a4606809904327ebd 659 Gene3D G3DSA:3.30.70.1450 587 651 2.5E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS03895 5d7d52c12856dd8a4606809904327ebd 659 PANTHER PTHR16254 1 572 3.7E-154 T 22-04-2016 VPUCM_RS03895 5d7d52c12856dd8a4606809904327ebd 659 Pfam PF00999 Sodium/hydrogen exchanger family 12 374 2.4E-66 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VPUCM_RS03895 5d7d52c12856dd8a4606809904327ebd 659 SUPERFAMILY SSF51735 407 539 2.92E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS03895 5d7d52c12856dd8a4606809904327ebd 659 Pfam PF02254 TrkA-N domain 411 521 8.8E-17 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.254 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 SMART SM00842 10 196 6.1E-95 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.1490.110 100 166 1.9E-13 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 PIRSF PIRSF003101 1 420 2.6E-146 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 168 208 3.9E-23 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 4 83 3.9E-23 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Pfam PF14450 Cell division protein FtsA 207 381 8.7E-24 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 SUPERFAMILY SSF53067 198 384 2.67E-45 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 PANTHER PTHR32432 1 420 2.4E-167 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 209 234 1.3E-26 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 298 359 1.3E-26 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 SUPERFAMILY SSF53067 8 221 1.24E-59 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.90.640.10 235 297 2.3E-19 T 22-04-2016 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-150 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VPUCM_RS02275 04a5bdffe53e849532eb8fcb72e72d0d 420 PANTHER PTHR32432:SF4 1 420 2.4E-167 T 22-04-2016 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF07196 Flagellin hook IN motif 196 247 2.7E-9 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 PANTHER PTHR30244 2 375 2.5E-160 T 22-04-2016 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 SUPERFAMILY SSF64518 1 375 1.44E-94 T 22-04-2016 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 PANTHER PTHR30244:SF1 2 375 2.5E-160 T 22-04-2016 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 Gene3D G3DSA:1.20.1330.10 278 331 4.9E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 Gene3D G3DSA:1.20.1330.10 54 171 4.9E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.2E-41 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 8.5E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS11645 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Gene3D G3DSA:2.20.25.90 59 115 8.5E-18 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.8E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 SUPERFAMILY SSF53706 60 646 7.46E-201 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 PANTHER PTHR11615:SF140 406 599 0.0 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 PANTHER PTHR11615:SF140 10 382 0.0 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 PANTHER PTHR11615:SF140 731 951 0.0 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Gene3D G3DSA:3.40.228.10 191 370 1.7E-62 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Gene3D G3DSA:2.40.40.20 768 779 6.7E-56 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Gene3D G3DSA:2.40.40.20 812 951 6.7E-56 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Gene3D G3DSA:2.40.40.20 641 674 6.7E-56 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 3.6E-55 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 3.6E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Gene3D G3DSA:3.40.50.740 371 394 1.5E-61 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Gene3D G3DSA:3.40.50.740 118 189 1.5E-61 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 Gene3D G3DSA:3.40.50.740 446 616 1.5E-61 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 PANTHER PTHR11615 406 599 0.0 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 PANTHER PTHR11615 10 382 0.0 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 PANTHER PTHR11615 731 951 0.0 T 22-04-2016 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 SMART SM00926 61 115 3.9E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 SUPERFAMILY SSF50692 752 782 4.35E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VPUCM_RS07985 07f021c8f27be2dbb7d6c4da36f0f12b 951 SUPERFAMILY SSF50692 813 951 4.35E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 SMART SM00363 18 83 2.8E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 SUPERFAMILY SSF55120 77 317 6.58E-80 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 5.4E-105 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 Pfam PF01479 S4 domain 18 65 1.3E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 PANTHER PTHR11079 7 323 1.9E-153 T 22-04-2016 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 PANTHER PTHR11079:SF73 7 323 1.9E-153 T 22-04-2016 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 Gene3D G3DSA:3.10.290.10 18 68 9.4E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 SUPERFAMILY SSF55174 17 68 1.85E-11 T 22-04-2016 VPUCM_RS02740 6e3345ae66870923d83a04c62186ec8f 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.1E-29 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS11155 d2fc1ca9a0c0c55f469537b949cf613e 294 PIRSF PIRSF016020 3 294 7.4E-66 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VPUCM_RS11155 d2fc1ca9a0c0c55f469537b949cf613e 294 Pfam PF01263 Aldose 1-epimerase 27 291 4.5E-52 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VPUCM_RS11155 d2fc1ca9a0c0c55f469537b949cf613e 294 SUPERFAMILY SSF74650 9 288 4.02E-75 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VPUCM_RS11155 d2fc1ca9a0c0c55f469537b949cf613e 294 PANTHER PTHR11122:SF14 5 291 3.9E-97 T 22-04-2016 VPUCM_RS11155 d2fc1ca9a0c0c55f469537b949cf613e 294 PANTHER PTHR11122 5 291 3.9E-97 T 22-04-2016 VPUCM_RS11155 d2fc1ca9a0c0c55f469537b949cf613e 294 Gene3D G3DSA:2.70.98.10 14 291 3.6E-87 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 Pfam PF00549 CoA-ligase 151 271 3.1E-22 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 PIRSF PIRSF001553 1 289 1.0E-134 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 2.5E-146 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 Gene3D G3DSA:3.40.50.720 2 119 1.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 SMART SM00881 4 100 6.0E-36 T 22-04-2016 IPR003781 CoA-binding GO:0048037 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 Gene3D G3DSA:3.40.50.261 120 287 2.5E-78 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 SUPERFAMILY SSF52210 123 285 2.09E-55 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 Pfam PF02629 CoA binding domain 6 99 4.1E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VPUCM_RS11780 800cb2c3826fcee52fd289e7ff151965 290 PANTHER PTHR11117 1 287 1.9E-198 T 22-04-2016 VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PANTHER PTHR33705 1 91 5.6E-38 T 22-04-2016 VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.8E-22 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 Gene3D G3DSA:3.30.1340.10 3 89 9.9E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 SUPERFAMILY SSF55594 4 90 7.07E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 8.7E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 8.7E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 8.7E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PANTHER PTHR33705:SF2 1 91 5.6E-38 T 22-04-2016 VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VPUCM_RS13995 8a6bad0e7acaa4524cbccb70f3ae63a1 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 1.8E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VPUCM_RS14135 400e25a7f3934eb42bf84687f535bfb9 281 SUPERFAMILY SSF52540 12 260 6.12E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14135 400e25a7f3934eb42bf84687f535bfb9 281 Pfam PF13401 AAA domain 42 168 4.0E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS14135 400e25a7f3934eb42bf84687f535bfb9 281 PANTHER PTHR35894 2 281 2.3E-94 T 22-04-2016 VPUCM_RS14135 400e25a7f3934eb42bf84687f535bfb9 281 PANTHER PTHR35894:SF1 2 281 2.3E-94 T 22-04-2016 VPUCM_RS14135 400e25a7f3934eb42bf84687f535bfb9 281 Gene3D G3DSA:3.40.50.300 30 180 5.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 Gene3D G3DSA:3.90.226.10 231 488 3.4E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 PANTHER PTHR32060 357 406 6.2E-19 T 22-04-2016 VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 PANTHER PTHR32060 139 335 6.2E-19 T 22-04-2016 VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 PANTHER PTHR32060:SF0 357 406 6.2E-19 T 22-04-2016 VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 PANTHER PTHR32060:SF0 139 335 6.2E-19 T 22-04-2016 VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 Gene3D G3DSA:2.30.42.10 150 204 6.4E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 Pfam PF03572 Peptidase family S41 260 407 1.0E-22 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 SUPERFAMILY SSF52096 254 451 1.99E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 SUPERFAMILY SSF52096 96 164 1.99E-31 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 SMART SM00245 231 449 0.0028 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VPUCM_RS09425 33c96791702296e1e1ba0020a40379ab 528 SUPERFAMILY SSF50156 147 209 1.1E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VPUCM_RS06385 1df16027c81df419de031db6ea97d473 106 SUPERFAMILY SSF102816 3 105 1.27E-49 T 22-04-2016 IPR007376 dsDNA mimic, putative VPUCM_RS06385 1df16027c81df419de031db6ea97d473 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.277 T 22-04-2016 IPR007376 dsDNA mimic, putative VPUCM_RS06385 1df16027c81df419de031db6ea97d473 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-50 T 22-04-2016 IPR007376 dsDNA mimic, putative VPUCM_RS06385 1df16027c81df419de031db6ea97d473 106 PIRSF PIRSF004916 1 105 2.1E-52 T 22-04-2016 IPR007376 dsDNA mimic, putative VPUCM_RS06385 1df16027c81df419de031db6ea97d473 106 Gene3D G3DSA:3.10.450.140 6 105 4.8E-46 T 22-04-2016 IPR007376 dsDNA mimic, putative VPUCM_RS06385 1df16027c81df419de031db6ea97d473 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.4E-45 T 22-04-2016 IPR007376 dsDNA mimic, putative VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 SUPERFAMILY SSF161098 24 245 3.53E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 SUPERFAMILY SSF161098 271 509 6.8E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 PANTHER PTHR30183:SF8 2 516 1.2E-214 T 22-04-2016 VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 3 506 1.1E-160 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 Gene3D G3DSA:1.10.3720.10 272 514 2.7E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 Gene3D G3DSA:1.10.3720.10 24 246 2.2E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 PANTHER PTHR30183 2 516 1.2E-214 T 22-04-2016 VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 344 500 2.7E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS01715 df34d18278b14819538d1acb25a3a62b 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 52 244 4.5E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 1.7E-132 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 PIRSF PIRSF006621 1 321 1.9E-101 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 Gene3D G3DSA:3.20.20.70 7 244 7.7E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 Gene3D G3DSA:1.10.1200.80 253 320 5.1E-19 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 PANTHER PTHR11082 1 320 1.0E-147 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 PANTHER PTHR11082:SF25 1 320 1.0E-147 T 22-04-2016 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 SUPERFAMILY SSF51395 10 319 5.49E-90 T 22-04-2016 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 306 1.2E-108 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS15080 54f05a90edbb4e60f6779a8d4f630968 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.924 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VPUCM_RS07390 69879f0989ec2410f5468a52a496df1f 158 SUPERFAMILY SSF55729 2 148 6.05E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07390 69879f0989ec2410f5468a52a496df1f 158 Gene3D G3DSA:3.40.630.30 2 149 2.0E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07390 69879f0989ec2410f5468a52a496df1f 158 PANTHER PTHR13256 1 148 3.5E-32 T 22-04-2016 VPUCM_RS07390 69879f0989ec2410f5468a52a496df1f 158 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 1.0E-28 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS11135 08636ebe8e00e7f795b2d8b9b6761900 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 3.7E-29 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1302 21.332 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 PANTHER PTHR10099 1 1302 0.0 T 22-04-2016 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1046 1299 1.4E-106 T 22-04-2016 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1300 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 SUPERFAMILY SSF56042 432 615 3.29E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 PANTHER PTHR10099:SF5 1 1302 0.0 T 22-04-2016 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 SUPERFAMILY SSF56042 830 1040 1.2E-55 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 SMART SM01211 1046 1301 3.8E-158 T 22-04-2016 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 SUPERFAMILY SSF109736 155 220 1.2E-21 T 22-04-2016 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 SUPERFAMILY SSF52317 1042 1300 1.43E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 SUPERFAMILY SSF82697 1 150 9.42E-50 T 22-04-2016 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 Gene3D G3DSA:3.30.1330.10 645 810 3.5E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 Gene3D G3DSA:3.30.1330.10 211 422 1.6E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 SUPERFAMILY SSF55326 620 816 1.2E-68 T 22-04-2016 VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 Gene3D G3DSA:3.40.50.880 1047 1270 9.4E-14 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 5.0E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 Pfam PF02769 AIR synthase related protein, C-terminal domain 840 973 6.5E-14 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VPUCM_RS12775 5f80e72a058703546029daae1882e721 1302 SUPERFAMILY SSF55326 221 428 6.28E-66 T 22-04-2016 VPUCM_RS13710 22a05e9ae906133c535fdb924df1e4cf 251 Gene3D G3DSA:3.20.20.370 1 242 2.2E-72 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VPUCM_RS13710 22a05e9ae906133c535fdb924df1e4cf 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 39.778 T 22-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VPUCM_RS13710 22a05e9ae906133c535fdb924df1e4cf 251 PANTHER PTHR31609 1 251 6.3E-66 T 22-04-2016 VPUCM_RS13710 22a05e9ae906133c535fdb924df1e4cf 251 SUPERFAMILY SSF88713 1 242 8.0E-68 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VPUCM_RS13710 22a05e9ae906133c535fdb924df1e4cf 251 Pfam PF04794 YdjC-like protein 2 230 1.2E-52 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 PANTHER PTHR30244:SF1 2 373 2.0E-105 T 22-04-2016 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 Gene3D G3DSA:1.20.1330.10 276 329 1.7E-46 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 Gene3D G3DSA:1.20.1330.10 55 169 1.7E-46 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 3.0E-33 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 SUPERFAMILY SSF64518 1 373 1.02E-77 T 22-04-2016 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 288 373 3.6E-21 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 PRINTS PR00207 Flagellin signature 75 94 2.2E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 PRINTS PR00207 Flagellin signature 36 53 2.2E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 PRINTS PR00207 Flagellin signature 110 133 2.2E-21 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 PANTHER PTHR30244 2 373 2.0E-105 T 22-04-2016 VPUCM_RS12080 ece165ad3aa79048b2b3149a9767ab33 374 Pfam PF07196 Flagellin hook IN motif 201 245 2.8E-7 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 SUPERFAMILY SSF52540 617 929 3.32E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 SUPERFAMILY SSF46785 960 1025 4.15E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 Pfam PF01580 FtsK/SpoIIIE family 643 856 2.6E-70 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 Pfam PF09397 Ftsk gamma domain 962 1022 7.2E-26 T 22-04-2016 IPR018541 FtsK gamma domain VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 Gene3D G3DSA:3.40.50.300 617 923 4.3E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 PANTHER PTHR22683:SF41 29 1023 0.0 T 22-04-2016 VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 PANTHER PTHR22683 29 1023 0.0 T 22-04-2016 VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 3.3E-41 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region VPUCM_RS05970 19d093e316b6db3f291cba20fc0ed587 1028 SMART SM00843 960 1025 6.8E-38 T 22-04-2016 IPR018541 FtsK gamma domain VPUCM_RS06780 6cac36ff412f5eac78d5364f4f6cefc4 71 Pfam PF13783 Domain of unknown function (DUF4177) 6 70 1.0E-9 T 22-04-2016 IPR025234 Protein of unknown function DUF4177 VPUCM_RS07090 6cac36ff412f5eac78d5364f4f6cefc4 71 Pfam PF13783 Domain of unknown function (DUF4177) 6 70 1.0E-9 T 22-04-2016 IPR025234 Protein of unknown function DUF4177 VPUCM_RS00370 a1367dcd3e0039d36235f71d37951259 680 Pfam PF01432 Peptidase family M3 222 677 7.6E-165 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VPUCM_RS00370 a1367dcd3e0039d36235f71d37951259 680 Gene3D G3DSA:1.20.1050.40 9 138 3.8E-28 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal VPUCM_RS00370 a1367dcd3e0039d36235f71d37951259 680 Gene3D G3DSA:3.40.390.10 360 504 1.7E-59 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VPUCM_RS00370 a1367dcd3e0039d36235f71d37951259 680 PANTHER PTHR11804 2 678 0.0 T 22-04-2016 VPUCM_RS00370 a1367dcd3e0039d36235f71d37951259 680 SUPERFAMILY SSF55486 1 677 3.42E-214 T 22-04-2016 VPUCM_RS00370 a1367dcd3e0039d36235f71d37951259 680 PANTHER PTHR11804:SF8 2 678 0.0 T 22-04-2016 VPUCM_RS00370 a1367dcd3e0039d36235f71d37951259 680 Gene3D G3DSA:1.10.1370.10 505 678 1.5E-143 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VPUCM_RS00370 a1367dcd3e0039d36235f71d37951259 680 Gene3D G3DSA:1.10.1370.10 140 349 1.5E-143 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VPUCM_RS06530 23d9a46ff70b07e76c0030c0137e5551 177 PANTHER PTHR10681:SF107 4 172 1.4E-31 T 22-04-2016 VPUCM_RS06530 23d9a46ff70b07e76c0030c0137e5551 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 38 169 4.5E-40 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VPUCM_RS06530 23d9a46ff70b07e76c0030c0137e5551 177 PANTHER PTHR10681 4 172 1.4E-31 T 22-04-2016 VPUCM_RS06530 23d9a46ff70b07e76c0030c0137e5551 177 SUPERFAMILY SSF52833 44 174 3.09E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS06530 23d9a46ff70b07e76c0030c0137e5551 177 Gene3D G3DSA:3.40.30.10 15 173 3.1E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS06530 23d9a46ff70b07e76c0030c0137e5551 177 Pfam PF08534 Redoxin 44 155 1.7E-12 T 22-04-2016 IPR013740 Redoxin GO:0016491 VPUCM_RS00620 545b52e9b8a8ea89f98bed9e159e83f1 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 9.5E-91 T 22-04-2016 IPR021342 Protein of unknown function DUF2959 VPUCM_RS07600 4612c17ddcdf740e0061e936d67e58db 164 SUPERFAMILY SSF54001 46 162 5.4E-40 T 22-04-2016 VPUCM_RS07600 4612c17ddcdf740e0061e936d67e58db 164 PANTHER PTHR21666:SF210 1 162 9.1E-39 T 22-04-2016 VPUCM_RS07600 4612c17ddcdf740e0061e936d67e58db 164 Pfam PF00877 NlpC/P60 family 57 161 6.1E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS07600 4612c17ddcdf740e0061e936d67e58db 164 Gene3D G3DSA:3.90.1720.10 47 162 1.7E-41 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS07600 4612c17ddcdf740e0061e936d67e58db 164 PANTHER PTHR21666 1 162 9.1E-39 T 22-04-2016 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 Gene3D G3DSA:3.40.720.10 8 373 8.2E-141 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 Gene3D G3DSA:3.40.720.10 415 416 8.2E-141 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 Gene3D G3DSA:3.40.720.10 466 523 8.2E-141 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 SUPERFAMILY SSF53649 9 401 5.63E-113 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 SUPERFAMILY SSF53649 466 505 5.63E-113 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 SMART SM00098 27 437 2.1E-52 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PANTHER PTHR11596 424 439 8.2E-107 T 22-04-2016 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PANTHER PTHR11596 13 389 8.2E-107 T 22-04-2016 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PANTHER PTHR11596 475 502 8.2E-107 T 22-04-2016 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 Pfam PF00245 Alkaline phosphatase 26 503 5.3E-83 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 2.7E-37 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PANTHER PTHR11596:SF5 424 439 8.2E-107 T 22-04-2016 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PANTHER PTHR11596:SF5 13 389 8.2E-107 T 22-04-2016 VPUCM_RS11180 cf4b58a9ee7e81c9a6d74d3109f9fb42 525 PANTHER PTHR11596:SF5 475 502 8.2E-107 T 22-04-2016 VPUCM_RS00150 3fcfdbab4aa102e411ccc714f1daa026 175 Gene3D G3DSA:3.40.50.360 106 175 6.2E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS00150 3fcfdbab4aa102e411ccc714f1daa026 175 Gene3D G3DSA:3.40.50.360 3 72 6.2E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS00150 3fcfdbab4aa102e411ccc714f1daa026 175 Pfam PF12724 Flavodoxin domain 5 153 7.5E-52 T 22-04-2016 IPR026816 Flavodoxin domain VPUCM_RS00150 3fcfdbab4aa102e411ccc714f1daa026 175 PANTHER PTHR38030:SF2 1 175 5.6E-87 T 22-04-2016 VPUCM_RS00150 3fcfdbab4aa102e411ccc714f1daa026 175 PANTHER PTHR38030 1 175 5.6E-87 T 22-04-2016 VPUCM_RS00150 3fcfdbab4aa102e411ccc714f1daa026 175 SUPERFAMILY SSF52218 3 158 4.35E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain VPUCM_RS03855 3253900c4c22d02a01bc1d64c3ee9696 108 Pfam PF05717 IS66 Orf2 like protein 9 103 2.4E-26 T 22-04-2016 IPR008878 Transposase IS66, Orf2 VPUCM_RS03855 3253900c4c22d02a01bc1d64c3ee9696 108 PANTHER PTHR36455 2 101 3.0E-19 T 22-04-2016 VPUCM_RS06790 bbba3563942d1de53992332a8af15d2f 149 SUPERFAMILY SSF55729 1 147 1.08E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06790 bbba3563942d1de53992332a8af15d2f 149 Gene3D G3DSA:3.40.630.30 1 148 2.6E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06790 bbba3563942d1de53992332a8af15d2f 149 Pfam PF13673 Acetyltransferase (GNAT) domain 47 149 2.1E-25 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS13220 ee38ae4c416c25d57a2b3a6f6f8719ac 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 158 2.7E-50 T 22-04-2016 IPR008136 CinA, C-terminal VPUCM_RS13220 ee38ae4c416c25d57a2b3a6f6f8719ac 160 SUPERFAMILY SSF142433 4 159 1.24E-56 T 22-04-2016 IPR008136 CinA, C-terminal VPUCM_RS13220 ee38ae4c416c25d57a2b3a6f6f8719ac 160 Pfam PF02464 Competence-damaged protein 6 158 2.0E-56 T 22-04-2016 IPR008136 CinA, C-terminal VPUCM_RS13220 ee38ae4c416c25d57a2b3a6f6f8719ac 160 Gene3D G3DSA:3.90.950.20 2 159 5.0E-57 T 22-04-2016 IPR008136 CinA, C-terminal VPUCM_RS13220 ee38ae4c416c25d57a2b3a6f6f8719ac 160 PANTHER PTHR13939 2 159 7.4E-71 T 22-04-2016 VPUCM_RS08695 dcd354f8098a284e4a551181ee9c543a 422 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 283 420 5.2E-50 T 22-04-2016 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 VPUCM_RS05175 a9fc6aa30351055e81e661c3cc089aac 404 PANTHER PTHR11751:SF303 9 399 7.1E-193 T 22-04-2016 VPUCM_RS05175 a9fc6aa30351055e81e661c3cc089aac 404 Pfam PF00155 Aminotransferase class I and II 61 391 1.7E-47 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VPUCM_RS05175 a9fc6aa30351055e81e661c3cc089aac 404 SUPERFAMILY SSF53383 5 400 2.42E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS05175 a9fc6aa30351055e81e661c3cc089aac 404 PANTHER PTHR11751 9 399 7.1E-193 T 22-04-2016 VPUCM_RS05175 a9fc6aa30351055e81e661c3cc089aac 404 Gene3D G3DSA:3.40.640.10 51 279 7.2E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS05175 a9fc6aa30351055e81e661c3cc089aac 404 Gene3D G3DSA:3.90.1150.10 280 403 4.2E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS08810 dc9a67594531919f8688963a90a52c63 69 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 63 1.8E-10 T 22-04-2016 IPR012671 Type III secretion system, secretion protein E GO:0009405 VPUCM_RS08810 dc9a67594531919f8688963a90a52c63 69 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 62 1.3E-10 T 22-04-2016 IPR012671 Type III secretion system, secretion protein E GO:0009405 VPUCM_RS08715 40f229c76bf8fd1a98d8bd8ac95aac40 261 PANTHER PTHR30065 1 241 1.8E-101 T 22-04-2016 VPUCM_RS08715 40f229c76bf8fd1a98d8bd8ac95aac40 261 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 5 242 3.2E-78 T 22-04-2016 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 VPUCM_RS08715 40f229c76bf8fd1a98d8bd8ac95aac40 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 5.2E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS08715 40f229c76bf8fd1a98d8bd8ac95aac40 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 5.2E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS08715 40f229c76bf8fd1a98d8bd8ac95aac40 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 5.2E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS08715 40f229c76bf8fd1a98d8bd8ac95aac40 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 5.2E-30 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS08715 40f229c76bf8fd1a98d8bd8ac95aac40 261 PANTHER PTHR30065:SF2 1 241 1.8E-101 T 22-04-2016 VPUCM_RS08715 40f229c76bf8fd1a98d8bd8ac95aac40 261 Pfam PF01311 Bacterial export proteins, family 1 11 246 2.4E-55 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS01620 bfcf4015f95829e2ae2408de08069563 205 Gene3D G3DSA:3.40.50.300 9 204 4.2E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01620 bfcf4015f95829e2ae2408de08069563 205 SUPERFAMILY SSF52540 25 200 2.74E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01620 bfcf4015f95829e2ae2408de08069563 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.348 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VPUCM_RS01620 bfcf4015f95829e2ae2408de08069563 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 197 1.1E-80 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VPUCM_RS01620 bfcf4015f95829e2ae2408de08069563 205 PANTHER PTHR11055 8 204 4.2E-125 T 22-04-2016 VPUCM_RS01620 bfcf4015f95829e2ae2408de08069563 205 Pfam PF01583 Adenylylsulphate kinase 31 185 4.3E-70 T 22-04-2016 VPUCM_RS10800 be4fababfe489c622b021895dd511576 263 SUPERFAMILY SSF53335 7 251 1.7E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10800 be4fababfe489c622b021895dd511576 263 PANTHER PTHR10108:SF919 3 205 5.0E-28 T 22-04-2016 VPUCM_RS10800 be4fababfe489c622b021895dd511576 263 Pfam PF08241 Methyltransferase domain 52 148 1.3E-13 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VPUCM_RS10800 be4fababfe489c622b021895dd511576 263 Gene3D G3DSA:3.40.50.150 38 259 5.8E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10800 be4fababfe489c622b021895dd511576 263 PANTHER PTHR10108 3 205 5.0E-28 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 PANTHER PTHR11615 346 806 0.0 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 PANTHER PTHR11615 1 314 0.0 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 Gene3D G3DSA:3.40.228.10 201 405 5.1E-69 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 SMART SM00926 50 110 2.4E-12 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 PANTHER PTHR11615:SF128 346 806 0.0 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 PANTHER PTHR11615:SF128 1 314 0.0 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 Gene3D G3DSA:2.40.40.20 666 808 1.5E-48 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 110 2.6E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 SUPERFAMILY SSF53706 51 692 9.95E-176 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 SUPERFAMILY SSF50692 636 806 2.9E-35 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 Pfam PF00384 Molybdopterin oxidoreductase 113 570 1.7E-98 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 Pfam PF01568 Molydopterin dinucleotide binding domain 690 801 7.3E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 Gene3D G3DSA:2.20.25.90 49 114 1.3E-17 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 9 808 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 Gene3D G3DSA:3.40.50.740 115 200 1.4E-76 T 22-04-2016 VPUCM_RS07835 fe5b1057558f63808f4708e078869fcf 815 Gene3D G3DSA:3.40.50.740 406 649 1.4E-76 T 22-04-2016 VPUCM_RS14340 0434b8f5a05bcdaa7fd0ca134c8e4546 129 PANTHER PTHR21011 1 126 1.2E-41 T 22-04-2016 VPUCM_RS14340 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Pfam PF01250 Ribosomal protein S6 3 91 1.2E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS14340 0434b8f5a05bcdaa7fd0ca134c8e4546 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS14340 0434b8f5a05bcdaa7fd0ca134c8e4546 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.9E-39 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS14340 0434b8f5a05bcdaa7fd0ca134c8e4546 129 SUPERFAMILY SSF54995 1 103 2.09E-38 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS14340 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.163 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VPUCM_RS14340 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Gene3D G3DSA:3.30.70.60 1 103 1.6E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VPUCM_RS14340 0434b8f5a05bcdaa7fd0ca134c8e4546 129 PANTHER PTHR21011:SF1 1 126 1.2E-41 T 22-04-2016 VPUCM_RS02105 7648b6bd520d02f26d84f37b6b28afb8 454 Gene3D G3DSA:1.20.1600.10 23 442 1.9E-80 T 22-04-2016 VPUCM_RS02105 7648b6bd520d02f26d84f37b6b28afb8 454 SUPERFAMILY SSF56954 1 442 5.62E-89 T 22-04-2016 VPUCM_RS02105 7648b6bd520d02f26d84f37b6b28afb8 454 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 449 6.7E-106 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VPUCM_RS02105 7648b6bd520d02f26d84f37b6b28afb8 454 PANTHER PTHR30026:SF3 1 453 3.1E-140 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VPUCM_RS02105 7648b6bd520d02f26d84f37b6b28afb8 454 Pfam PF02321 Outer membrane efflux protein 240 436 2.5E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS02105 7648b6bd520d02f26d84f37b6b28afb8 454 Pfam PF02321 Outer membrane efflux protein 25 216 2.4E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS02105 7648b6bd520d02f26d84f37b6b28afb8 454 PANTHER PTHR30026 1 453 3.1E-140 T 22-04-2016 VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.9E-66 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 3.7E-26 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 9.2E-62 T 22-04-2016 IPR000150 Cof protein GO:0016787 VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 PANTHER PTHR10000:SF29 1 268 1.5E-116 T 22-04-2016 VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 22-04-2016 VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 Gene3D G3DSA:3.40.50.1000 1 75 2.9E-57 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 Gene3D G3DSA:3.40.50.1000 181 267 2.9E-57 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 SUPERFAMILY SSF56784 1 267 1.92E-75 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 Gene3D G3DSA:3.30.1240.10 88 180 7.6E-31 T 22-04-2016 VPUCM_RS08545 0bdb07b591ad9d84f2595abc58caef49 269 PANTHER PTHR10000 1 268 1.5E-116 T 22-04-2016 VPUCM_RS05060 e9068d930eafb0bc4d116cba9b2ad277 220 Pfam PF02080 TrkA-C domain 154 214 1.2E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS05060 e9068d930eafb0bc4d116cba9b2ad277 220 PANTHER PTHR16254 5 162 3.9E-41 T 22-04-2016 VPUCM_RS05060 e9068d930eafb0bc4d116cba9b2ad277 220 Pfam PF02254 TrkA-N domain 8 123 5.8E-28 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VPUCM_RS05060 e9068d930eafb0bc4d116cba9b2ad277 220 SUPERFAMILY SSF116726 134 215 3.01E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS05060 e9068d930eafb0bc4d116cba9b2ad277 220 Gene3D G3DSA:3.30.70.1450 149 215 1.9E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VPUCM_RS05060 e9068d930eafb0bc4d116cba9b2ad277 220 SUPERFAMILY SSF51735 6 136 2.37E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS05060 e9068d930eafb0bc4d116cba9b2ad277 220 Gene3D G3DSA:3.40.50.720 5 141 5.8E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS05895 d34d505b5f55c9c59a31aabc9c9c65c2 1820 SUPERFAMILY SSF52540 1443 1482 1.38E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05895 d34d505b5f55c9c59a31aabc9c9c65c2 1820 SUPERFAMILY SSF52540 1603 1790 1.38E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05895 d34d505b5f55c9c59a31aabc9c9c65c2 1820 PANTHER PTHR13884:SF8 1344 1763 1.6E-12 T 22-04-2016 VPUCM_RS05895 d34d505b5f55c9c59a31aabc9c9c65c2 1820 PANTHER PTHR13884 1344 1763 1.6E-12 T 22-04-2016 VPUCM_RS05895 d34d505b5f55c9c59a31aabc9c9c65c2 1820 Gene3D G3DSA:3.40.50.300 1643 1788 6.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05895 d34d505b5f55c9c59a31aabc9c9c65c2 1820 Gene3D G3DSA:3.40.50.300 1420 1556 6.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 SUPERFAMILY SSF51735 6 170 3.74E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 Gene3D G3DSA:3.40.50.720 5 170 1.9E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 3.1E-51 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 SUPERFAMILY SSF56327 173 436 7.31E-95 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PANTHER PTHR32092:SF5 3 439 1.0E-250 T 22-04-2016 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 Gene3D G3DSA:3.90.110.10 171 435 8.8E-102 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 PANTHER PTHR32092 3 439 1.0E-250 T 22-04-2016 VPUCM_RS13715 e7f5c81190a4518a547dcf172c5a84db 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.3E-61 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 Gene3D G3DSA:3.30.1330.60 76 185 8.1E-30 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 SUPERFAMILY SSF103088 56 182 2.75E-29 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 PANTHER PTHR30128:SF15 36 202 2.3E-60 T 22-04-2016 VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 Gene3D G3DSA:4.10.1080.10 39 73 6.9E-6 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 PANTHER PTHR30128 36 202 2.3E-60 T 22-04-2016 VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 Pfam PF00691 OmpA family 83 178 4.4E-19 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 PRINTS PR01021 OMPA domain signature 114 129 1.45E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 PRINTS PR01021 OMPA domain signature 84 106 1.45E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 PRINTS PR01021 OMPA domain signature 129 145 1.45E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS08520 44a9e8d1be8f6e4cec5fc131c1535a50 206 SUPERFAMILY SSF103647 23 71 1.12E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VPUCM_RS02080 1998b6460a375835bd0448efa920c481 511 Gene3D G3DSA:2.40.320.10 1 216 5.3E-38 T 22-04-2016 IPR023577 CYTH domain VPUCM_RS02080 1998b6460a375835bd0448efa920c481 511 SMART SM01118 2 208 1.4E-42 T 22-04-2016 IPR023577 CYTH domain VPUCM_RS02080 1998b6460a375835bd0448efa920c481 511 SUPERFAMILY SSF55154 1 224 3.6E-51 T 22-04-2016 IPR033469 CYTH-like domain VPUCM_RS02080 1998b6460a375835bd0448efa920c481 511 PANTHER PTHR39569:SF1 2 510 7.2E-141 T 22-04-2016 VPUCM_RS02080 1998b6460a375835bd0448efa920c481 511 SMART SM00880 234 502 3.8E-19 T 22-04-2016 IPR007899 CHAD domain VPUCM_RS02080 1998b6460a375835bd0448efa920c481 511 Pfam PF05235 CHAD domain 236 419 7.6E-6 T 22-04-2016 IPR007899 CHAD domain VPUCM_RS02080 1998b6460a375835bd0448efa920c481 511 Pfam PF01928 CYTH domain 3 202 5.5E-32 T 22-04-2016 IPR023577 CYTH domain VPUCM_RS02080 1998b6460a375835bd0448efa920c481 511 PANTHER PTHR39569 2 510 7.2E-141 T 22-04-2016 VPUCM_RS21255 8c537f22049e325f1cfa8d0a3b0e83da 188 SUPERFAMILY SSF52200 100 167 1.1E-12 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VPUCM_RS21255 8c537f22049e325f1cfa8d0a3b0e83da 188 Pfam PF13676 TIR domain 104 168 2.0E-11 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VPUCM_RS21255 8c537f22049e325f1cfa8d0a3b0e83da 188 Gene3D G3DSA:3.40.50.10140 102 167 1.6E-9 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VPUCM_RS05920 bfe3a01b00773dc8738c692f57aa086b 318 PANTHER PTHR31752 98 314 6.5E-84 T 22-04-2016 VPUCM_RS05920 bfe3a01b00773dc8738c692f57aa086b 318 PANTHER PTHR31752:SF13 98 314 6.5E-84 T 22-04-2016 VPUCM_RS05920 bfe3a01b00773dc8738c692f57aa086b 318 Pfam PF03547 Membrane transport protein 164 307 4.7E-14 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 SUPERFAMILY SSF52540 4 193 2.06E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 6.2E-180 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 Pfam PF07670 Nucleoside recognition 509 690 2.8E-37 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 Pfam PF07670 Nucleoside recognition 349 440 2.0E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.4E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PANTHER PTHR11649:SF37 260 605 1.5E-251 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PANTHER PTHR11649:SF37 4 149 1.5E-251 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PANTHER PTHR11649:SF37 658 725 1.5E-251 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 2.6E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 Pfam PF02421 Ferrous iron transport protein B 4 161 6.8E-59 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.9E-19 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 Gene3D G3DSA:3.40.50.300 4 168 1.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PANTHER PTHR11649 260 605 1.5E-251 T 22-04-2016 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PANTHER PTHR11649 4 149 1.5E-251 T 22-04-2016 VPUCM_RS04830 3cb4a2ec46cd3480f245b86e94d05451 758 PANTHER PTHR11649 658 725 1.5E-251 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 SUPERFAMILY SSF51735 1083 1281 4.53E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 SUPERFAMILY SSF51735 945 1047 4.53E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PANTHER PTHR11606 49 150 0.0 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PANTHER PTHR11606 673 1097 0.0 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PANTHER PTHR11606 215 562 0.0 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PANTHER PTHR11606 1122 1367 0.0 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PANTHER PTHR11606:SF1 49 150 0.0 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PANTHER PTHR11606:SF1 673 1097 0.0 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PANTHER PTHR11606:SF1 215 562 0.0 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PANTHER PTHR11606:SF1 1122 1367 0.0 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 SUPERFAMILY SSF53223 754 940 1.53E-25 T 22-04-2016 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 PIRSF PIRSF036761 1 1610 0.0 T 22-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 Gene3D G3DSA:3.40.50.720 1096 1180 2.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08360 3bc96cc8d85463301317f5d33632f0f3 1613 Gene3D G3DSA:3.40.50.720 942 1053 2.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04310 7c91651fa3fd916c5a7d3739aaca2455 351 PANTHER PTHR23344 23 351 2.3E-109 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 VPUCM_RS04310 7c91651fa3fd916c5a7d3739aaca2455 351 SUPERFAMILY SSF51695 22 349 7.06E-91 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VPUCM_RS04310 7c91651fa3fd916c5a7d3739aaca2455 351 PANTHER PTHR23344:SF7 23 351 2.3E-109 T 22-04-2016 VPUCM_RS04310 7c91651fa3fd916c5a7d3739aaca2455 351 Gene3D G3DSA:3.20.20.190 22 349 7.1E-90 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VPUCM_RS04310 7c91651fa3fd916c5a7d3739aaca2455 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 1.8E-64 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VPUCM_RS13920 35f07e366a4bfcfde79aaa502a02a08f 84 PANTHER PTHR12735 1 84 1.8E-35 T 22-04-2016 VPUCM_RS13920 35f07e366a4bfcfde79aaa502a02a08f 84 PANTHER PTHR12735:SF24 1 84 1.8E-35 T 22-04-2016 VPUCM_RS13920 35f07e366a4bfcfde79aaa502a02a08f 84 Gene3D G3DSA:3.30.300.90 3 80 5.2E-27 T 22-04-2016 IPR002634 BolA protein VPUCM_RS13920 35f07e366a4bfcfde79aaa502a02a08f 84 Pfam PF01722 BolA-like protein 22 74 2.6E-14 T 22-04-2016 IPR002634 BolA protein VPUCM_RS13920 35f07e366a4bfcfde79aaa502a02a08f 84 PIRSF PIRSF003113 2 83 1.9E-22 T 22-04-2016 IPR002634 BolA protein VPUCM_RS13920 35f07e366a4bfcfde79aaa502a02a08f 84 SUPERFAMILY SSF82657 4 82 1.83E-28 T 22-04-2016 IPR002634 BolA protein VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 SUPERFAMILY SSF46785 4 117 1.09E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 SUPERFAMILY SSF53850 95 300 1.01E-34 T 22-04-2016 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:3.40.190.10 200 275 1.5E-18 T 22-04-2016 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 PANTHER PTHR30346 3 301 3.8E-202 T 22-04-2016 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 7.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 PANTHER PTHR30346:SF10 3 301 3.8E-202 T 22-04-2016 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:3.40.190.10 96 199 4.1E-24 T 22-04-2016 VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 Pfam PF03466 LysR substrate binding domain 96 299 5.7E-37 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS02880 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:1.10.10.10 6 84 1.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13510 515170003381595f687df469bea2cfd2 141 Gene3D G3DSA:3.30.420.140 3 137 1.7E-40 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VPUCM_RS13510 515170003381595f687df469bea2cfd2 141 PANTHER PTHR33317 4 139 1.3E-38 T 22-04-2016 VPUCM_RS13510 515170003381595f687df469bea2cfd2 141 Pfam PF03652 Holliday junction resolvase 4 136 1.6E-35 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VPUCM_RS13510 515170003381595f687df469bea2cfd2 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.6E-48 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VPUCM_RS13510 515170003381595f687df469bea2cfd2 141 SMART SM00732 3 104 3.9E-34 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VPUCM_RS13510 515170003381595f687df469bea2cfd2 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.052 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VPUCM_RS13510 515170003381595f687df469bea2cfd2 141 SUPERFAMILY SSF53098 3 136 1.24E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 Pfam PF06580 Histidine kinase 366 444 1.0E-26 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 Gene3D G3DSA:3.30.450.40 255 352 9.2E-5 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 Gene3D G3DSA:3.30.565.10 414 553 1.2E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 PANTHER PTHR34220 1 553 3.0E-269 T 22-04-2016 VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 Pfam PF13492 GAF domain 241 351 6.5E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 SUPERFAMILY SSF55781 227 351 4.49E-7 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 SUPERFAMILY SSF55874 428 524 2.46E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 2.7E-59 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VPUCM_RS02640 2db09c92c93ab86d53b1a0757a5d2bac 556 PANTHER PTHR34220:SF3 1 553 3.0E-269 T 22-04-2016 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.974 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 8.1E-64 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.9E-49 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 SUPERFAMILY SSF52096 5 318 2.87E-106 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 Gene3D G3DSA:3.90.226.10 57 274 3.1E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 5.3E-165 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VPUCM_RS04710 e77bf0e7c7eda61f9b922c2b34b05c4c 319 PANTHER PTHR22855 1 317 1.6E-131 T 22-04-2016 VPUCM_RS15380 ca91ae2ba8263b43a61a75872c08cf9d 264 Pfam PF04072 Leucine carboxyl methyltransferase 64 202 2.0E-8 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VPUCM_RS15380 ca91ae2ba8263b43a61a75872c08cf9d 264 PIRSF PIRSF028177 1 264 1.2E-69 T 22-04-2016 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00174 VPUCM_RS15380 ca91ae2ba8263b43a61a75872c08cf9d 264 SUPERFAMILY SSF53335 13 246 2.16E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15380 ca91ae2ba8263b43a61a75872c08cf9d 264 Gene3D G3DSA:3.40.50.150 13 212 4.6E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15380 ca91ae2ba8263b43a61a75872c08cf9d 264 PANTHER PTHR13600:SF19 7 182 6.2E-46 T 22-04-2016 VPUCM_RS15380 ca91ae2ba8263b43a61a75872c08cf9d 264 PANTHER PTHR13600 7 182 6.2E-46 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VPUCM_RS03650 a151e296fecad89ebb4bc870e8a487c1 93 Pfam PF04981 NMD3 family 9 75 6.6E-6 T 22-04-2016 IPR007064 NMD3 VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 PANTHER PTHR11472 1 687 9.3E-271 T 22-04-2016 VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 254 6.1E-5 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 SUPERFAMILY SSF52540 14 123 3.15E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 SUPERFAMILY SSF52540 207 263 3.15E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 SUPERFAMILY SSF52540 630 666 3.15E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 PANTHER PTHR11472:SF32 1 687 9.3E-271 T 22-04-2016 VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 SMART SM00491 535 671 7.3E-28 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 Gene3D G3DSA:3.40.50.300 507 666 4.7E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 Pfam PF13307 Helicase C-terminal domain 526 684 2.2E-36 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 Gene3D G3DSA:3.40.50.300 32 131 1.4E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 Gene3D G3DSA:3.40.50.300 212 253 1.4E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 SUPERFAMILY SSF52540 507 610 2.66E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 SUPERFAMILY SSF52540 243 265 2.66E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10930 c0561211b2db0c0dd8e64b37022cd33e 691 SUPERFAMILY SSF52540 641 666 2.66E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02875 8c4641eda80f5693cf2116e137c84833 203 PANTHER PTHR10681 1 196 3.1E-84 T 22-04-2016 VPUCM_RS02875 8c4641eda80f5693cf2116e137c84833 203 Gene3D G3DSA:3.40.30.10 3 193 1.6E-69 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS02875 8c4641eda80f5693cf2116e137c84833 203 SUPERFAMILY SSF52833 1 194 5.48E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS02875 8c4641eda80f5693cf2116e137c84833 203 PIRSF PIRSF000239 1 201 1.7E-58 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 VPUCM_RS02875 8c4641eda80f5693cf2116e137c84833 203 Pfam PF00578 AhpC/TSA family 4 139 7.8E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VPUCM_RS02875 8c4641eda80f5693cf2116e137c84833 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 SUPERFAMILY SSF63411 274 464 3.33E-32 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 SUPERFAMILY SSF63411 515 717 1.59E-42 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 Pfam PF00675 Insulinase (Peptidase family M16) 65 150 1.3E-16 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 2.5E-10 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 Gene3D G3DSA:3.30.830.10 743 925 3.6E-25 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 Gene3D G3DSA:3.30.830.10 517 730 2.8E-47 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 Gene3D G3DSA:3.30.830.10 46 263 2.2E-58 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 PANTHER PTHR11851 23 863 3.9E-271 T 22-04-2016 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 PANTHER PTHR11851:SF136 23 863 3.9E-271 T 22-04-2016 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 SUPERFAMILY SSF63411 45 254 7.17E-55 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 Pfam PF05193 Peptidase M16 inactive domain 682 853 2.6E-21 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 Pfam PF05193 Peptidase M16 inactive domain 215 390 3.2E-30 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 Gene3D G3DSA:3.30.830.10 279 458 4.4E-24 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VPUCM_RS13115 23c0ac8f03cdb370c0be66ce3c5d902b 947 SUPERFAMILY SSF63411 735 936 2.83E-42 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS06685 52316c57fa24ce423d3416ed13c5fe2c 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VPUCM_RS06685 52316c57fa24ce423d3416ed13c5fe2c 120 PANTHER PTHR12589 1 120 1.5E-52 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VPUCM_RS06685 52316c57fa24ce423d3416ed13c5fe2c 120 PIRSF PIRSF006113 1 120 2.2E-53 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VPUCM_RS06685 52316c57fa24ce423d3416ed13c5fe2c 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.7E-35 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VPUCM_RS06685 52316c57fa24ce423d3416ed13c5fe2c 120 Gene3D G3DSA:3.30.479.10 1 120 2.8E-41 T 22-04-2016 VPUCM_RS06685 52316c57fa24ce423d3416ed13c5fe2c 120 SUPERFAMILY SSF55620 1 118 5.34E-41 T 22-04-2016 VPUCM_RS10470 80e9ddc67964a08b8a5a997a29a6cd5c 230 SUPERFAMILY SSF52540 49 159 6.37E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10470 80e9ddc67964a08b8a5a997a29a6cd5c 230 PANTHER PTHR35369 30 159 6.1E-14 T 22-04-2016 VPUCM_RS10470 80e9ddc67964a08b8a5a997a29a6cd5c 230 Gene3D G3DSA:3.40.50.300 48 159 1.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10470 80e9ddc67964a08b8a5a997a29a6cd5c 230 Pfam PF00154 recA bacterial DNA recombination protein 29 125 9.7E-6 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VPUCM_RS10470 80e9ddc67964a08b8a5a997a29a6cd5c 230 PANTHER PTHR35369:SF1 30 159 6.1E-14 T 22-04-2016 VPUCM_RS10470 80e9ddc67964a08b8a5a997a29a6cd5c 230 PIRSF PIRSF037290 1 230 2.1E-79 T 22-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 SUPERFAMILY SSF51621 6 877 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 6.1E-291 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.7E-67 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 Gene3D G3DSA:1.20.1440.90 273 387 1.2E-30 T 22-04-2016 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PANTHER PTHR30523 1 877 0.0 T 22-04-2016 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 18.026 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VPUCM_RS14440 fc247a0be3fc2c3852d3723cb9858014 877 PANTHER PTHR30523:SF3 1 877 0.0 T 22-04-2016 VPUCM_RS07705 b7b9297b09b831159a6ac83a5c79dc0f 512 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 501 6.5E-231 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VPUCM_RS07705 b7b9297b09b831159a6ac83a5c79dc0f 512 Pfam PF11230 Protein of unknown function (DUF3029) 20 501 9.7E-231 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VPUCM_RS07705 b7b9297b09b831159a6ac83a5c79dc0f 512 SUPERFAMILY SSF51998 24 467 1.74E-96 T 22-04-2016 VPUCM_RS07705 b7b9297b09b831159a6ac83a5c79dc0f 512 Gene3D G3DSA:3.20.70.20 88 247 2.4E-13 T 22-04-2016 VPUCM_RS07705 b7b9297b09b831159a6ac83a5c79dc0f 512 PIRSF PIRSF028991 4 512 5.2E-293 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted VPUCM_RS12740 e5a7ceae8b07e08cda9e808a6667544b 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 2.3E-13 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VPUCM_RS12740 e5a7ceae8b07e08cda9e808a6667544b 154 PANTHER PTHR39563 2 152 4.7E-101 T 22-04-2016 VPUCM_RS12740 e5a7ceae8b07e08cda9e808a6667544b 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.91 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 VPUCM_RS12740 e5a7ceae8b07e08cda9e808a6667544b 154 Gene3D G3DSA:3.40.50.2020 1 147 9.1E-41 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS12740 e5a7ceae8b07e08cda9e808a6667544b 154 SUPERFAMILY SSF53271 5 146 8.95E-28 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS10035 e36bb8fa09b5f6ba5900cbea4cf7a47e 256 Pfam PF02754 Cysteine-rich domain 121 203 4.6E-8 T 22-04-2016 IPR004017 Cysteine-rich domain VPUCM_RS10035 e36bb8fa09b5f6ba5900cbea4cf7a47e 256 Pfam PF02754 Cysteine-rich domain 6 85 1.7E-6 T 22-04-2016 IPR004017 Cysteine-rich domain VPUCM_RS10035 e36bb8fa09b5f6ba5900cbea4cf7a47e 256 PANTHER PTHR32479:SF12 5 203 4.0E-27 T 22-04-2016 VPUCM_RS10035 e36bb8fa09b5f6ba5900cbea4cf7a47e 256 PANTHER PTHR32479 5 203 4.0E-27 T 22-04-2016 VPUCM_RS04175 224bb271ed746dccb53cb765a8ff0b43 322 Pfam PF00482 Type II secretion system (T2SS), protein F 156 279 7.6E-18 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS04175 224bb271ed746dccb53cb765a8ff0b43 322 PANTHER PTHR35007:SF1 143 322 3.2E-45 T 22-04-2016 VPUCM_RS04175 224bb271ed746dccb53cb765a8ff0b43 322 PANTHER PTHR35007 143 322 3.2E-45 T 22-04-2016 VPUCM_RS10300 49461e2403f8716009c0b50ec16ec30f 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.0E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VPUCM_RS10300 49461e2403f8716009c0b50ec16ec30f 377 SUPERFAMILY SSF111369 49 253 9.42E-16 T 22-04-2016 VPUCM_RS10300 49461e2403f8716009c0b50ec16ec30f 377 PANTHER PTHR32347:SF12 1 367 2.0E-60 T 22-04-2016 VPUCM_RS10300 49461e2403f8716009c0b50ec16ec30f 377 PANTHER PTHR32347 1 367 2.0E-60 T 22-04-2016 VPUCM_RS10300 49461e2403f8716009c0b50ec16ec30f 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 1.3E-35 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VPUCM_RS10300 49461e2403f8716009c0b50ec16ec30f 377 Gene3D G3DSA:2.40.50.100 57 90 3.5E-13 T 22-04-2016 VPUCM_RS10300 49461e2403f8716009c0b50ec16ec30f 377 Gene3D G3DSA:2.40.50.100 174 200 3.5E-13 T 22-04-2016 VPUCM_RS07735 f1c53d325de98dac9d8151d7934d9f70 396 PANTHER PTHR11496 31 390 6.5E-106 T 22-04-2016 VPUCM_RS07735 f1c53d325de98dac9d8151d7934d9f70 396 Gene3D G3DSA:1.20.1090.10 201 391 5.2E-53 T 22-04-2016 VPUCM_RS07735 f1c53d325de98dac9d8151d7934d9f70 396 SUPERFAMILY SSF56796 26 392 4.71E-109 T 22-04-2016 VPUCM_RS07735 f1c53d325de98dac9d8151d7934d9f70 396 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 385 1.7E-107 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VPUCM_RS07735 f1c53d325de98dac9d8151d7934d9f70 396 Gene3D G3DSA:3.40.50.1970 26 200 5.1E-54 T 22-04-2016 VPUCM_RS07735 f1c53d325de98dac9d8151d7934d9f70 396 PANTHER PTHR11496:SF74 31 390 6.5E-106 T 22-04-2016 VPUCM_RS07735 f1c53d325de98dac9d8151d7934d9f70 396 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 276 296 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 Gene3D G3DSA:3.30.390.10 1 123 4.9E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 Pfam PF13378 Enolase C-terminal domain-like 125 279 4.1E-13 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 1.0E-109 T 22-04-2016 VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 323 22.841 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 SUPERFAMILY SSF51604 106 321 5.24E-47 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 PANTHER PTHR13794:SF8 6 316 4.2E-85 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 SUPERFAMILY SSF54826 1 100 1.77E-25 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 Gene3D G3DSA:3.20.20.120 124 303 2.0E-44 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 PANTHER PTHR13794 6 316 4.2E-85 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 VPUCM_RS05200 073a9f188e753ed8e08faad21ad30622 329 SMART SM00922 116 213 7.4E-6 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VPUCM_RS11225 a79cfb8e0ba78da273a6fd3a325a6cb3 425 PANTHER PTHR30501:SF2 1 423 1.1E-120 T 22-04-2016 VPUCM_RS11225 a79cfb8e0ba78da273a6fd3a325a6cb3 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 425 34.796 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 VPUCM_RS11225 a79cfb8e0ba78da273a6fd3a325a6cb3 425 PANTHER PTHR30501 1 423 1.1E-120 T 22-04-2016 VPUCM_RS11225 a79cfb8e0ba78da273a6fd3a325a6cb3 425 PIRSF PIRSF006054 1 425 1.2E-190 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 VPUCM_RS11225 a79cfb8e0ba78da273a6fd3a325a6cb3 425 Pfam PF03313 Serine dehydratase alpha chain 131 420 2.9E-50 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit VPUCM_RS11415 be14f093da09d200f6fe0d37c8bc930b 419 SUPERFAMILY SSF56935 27 419 2.98E-87 T 22-04-2016 VPUCM_RS11415 be14f093da09d200f6fe0d37c8bc930b 419 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 419 2.4E-112 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_RS11415 be14f093da09d200f6fe0d37c8bc930b 419 Gene3D G3DSA:2.40.160.60 26 419 2.0E-121 T 22-04-2016 VPUCM_RS11415 be14f093da09d200f6fe0d37c8bc930b 419 PANTHER PTHR35093 4 419 8.6E-220 T 22-04-2016 VPUCM_RS11415 be14f093da09d200f6fe0d37c8bc930b 419 PANTHER PTHR35093:SF1 4 419 8.6E-220 T 22-04-2016 VPUCM_RS14975 c66a7a9656b6df2930b1712101f3170c 159 SUPERFAMILY SSF75217 2 157 2.94E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VPUCM_RS14975 c66a7a9656b6df2930b1712101f3170c 159 PANTHER PTHR12029:SF31 1 158 3.1E-75 T 22-04-2016 VPUCM_RS14975 c66a7a9656b6df2930b1712101f3170c 159 PIRSF PIRSF029256 1 159 2.1E-66 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VPUCM_RS14975 c66a7a9656b6df2930b1712101f3170c 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.755 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VPUCM_RS14975 c66a7a9656b6df2930b1712101f3170c 159 Gene3D G3DSA:3.40.1280.10 1 158 1.7E-65 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VPUCM_RS14975 c66a7a9656b6df2930b1712101f3170c 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 3.9E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VPUCM_RS14975 c66a7a9656b6df2930b1712101f3170c 159 PANTHER PTHR12029 1 158 3.1E-75 T 22-04-2016 VPUCM_RS14975 c66a7a9656b6df2930b1712101f3170c 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 1.1E-58 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 2.6E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 2.6E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 2.6E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 2.6E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 2.6E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 2.6E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 2.6E-44 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PIRSF PIRSF006615 1 490 1.5E-199 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PANTHER PTHR34217:SF1 1 490 1.8E-246 T 22-04-2016 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 SUPERFAMILY SSF55486 1 490 1.59E-119 T 22-04-2016 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 9 489 1.4E-93 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VPUCM_RS09065 7c9bba119d2b04a690f78353886c1d71 490 PANTHER PTHR34217 1 490 1.8E-246 T 22-04-2016 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 SUPERFAMILY SSF57783 16 64 1.98E-14 T 22-04-2016 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 Gene3D G3DSA:3.30.65.10 17 59 1.3E-14 T 22-04-2016 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 Gene3D G3DSA:3.30.65.10 105 146 1.8E-7 T 22-04-2016 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 Gene3D G3DSA:3.30.65.10 67 104 2.5E-14 T 22-04-2016 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 SUPERFAMILY SSF57783 107 147 3.49E-5 T 22-04-2016 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 PANTHER PTHR11390 3 188 3.3E-90 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 PANTHER PTHR11390:SF26 3 188 3.3E-90 T 22-04-2016 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 1.0E-16 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 186 2.7 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 1.9E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 2.3E-16 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VPUCM_RS15860 c0c8ed3f766acae7c0d2ee3f264a0173 189 SUPERFAMILY SSF57783 66 110 9.64E-15 T 22-04-2016 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 Gene3D G3DSA:1.10.10.60 222 270 2.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 1.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 1.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 PANTHER PTHR11019:SF46 143 275 7.1E-31 T 22-04-2016 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 SUPERFAMILY SSF46689 221 270 1.52E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 Gene3D G3DSA:1.10.10.60 167 221 6.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 Pfam PF12833 Helix-turn-helix domain 191 269 3.6E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 SMART SM00342 185 267 5.3E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 PANTHER PTHR11019 143 275 7.1E-31 T 22-04-2016 VPUCM_RS09160 c69362389ceca95365a518f6ed20e234 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VPUCM_RS03840 6430b8748d712b670b77ad8d897e6dca 355 Pfam PF13362 Toprim domain 249 347 6.1E-16 T 22-04-2016 IPR006171 Toprim domain VPUCM_RS03840 6430b8748d712b670b77ad8d897e6dca 355 Pfam PF08273 Zinc-binding domain of primase-helicase 37 75 5.8E-14 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- VPUCM_RS03840 6430b8748d712b670b77ad8d897e6dca 355 SMART SM00778 37 75 5.2E-15 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- VPUCM_RS03840 6430b8748d712b670b77ad8d897e6dca 355 SUPERFAMILY SSF57783 18 102 1.19E-7 T 22-04-2016 VPUCM_RS24145 def34f3812595bc70f5cd88d2b34b242 457 Gene3D G3DSA:3.40.50.300 9 136 3.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS24145 def34f3812595bc70f5cd88d2b34b242 457 SUPERFAMILY SSF52540 2 207 1.02E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14805 addc4f421586b9d413ebbb73e1080d9c 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 467 8.5E-82 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS14805 addc4f421586b9d413ebbb73e1080d9c 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 465 3.7E-49 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS14805 addc4f421586b9d413ebbb73e1080d9c 471 PANTHER PTHR10283 1 74 3.1E-140 T 22-04-2016 VPUCM_RS14805 addc4f421586b9d413ebbb73e1080d9c 471 PANTHER PTHR10283 94 464 3.1E-140 T 22-04-2016 VPUCM_RS14805 addc4f421586b9d413ebbb73e1080d9c 471 PANTHER PTHR10283:SF92 1 74 3.1E-140 T 22-04-2016 VPUCM_RS14805 addc4f421586b9d413ebbb73e1080d9c 471 PANTHER PTHR10283:SF92 94 464 3.1E-140 T 22-04-2016 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.0E-44 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 PANTHER PTHR30531:SF3 1 349 7.0E-177 T 22-04-2016 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 SUPERFAMILY SSF160544 238 345 4.45E-33 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 3.6E-135 T 22-04-2016 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 1.4E-114 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 Gene3D G3DSA:3.40.1690.10 212 347 4.9E-53 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VPUCM_RS08720 d51257acfa0e127013325b2f4ea50054 351 PANTHER PTHR30531 1 349 7.0E-177 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 PANTHER PTHR13847 607 669 3.2E-145 T 22-04-2016 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 PANTHER PTHR13847 224 588 3.2E-145 T 22-04-2016 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 PANTHER PTHR13847:SF182 607 669 3.2E-145 T 22-04-2016 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 PANTHER PTHR13847:SF182 224 588 3.2E-145 T 22-04-2016 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 8.6E-155 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 Gene3D G3DSA:3.50.50.60 395 480 2.6E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 Gene3D G3DSA:3.50.50.60 266 335 2.6E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 Gene3D G3DSA:3.50.50.60 574 656 2.6E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 Gene3D G3DSA:3.40.50.150 9 251 4.5E-105 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 9.4E-48 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.888 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 3.5E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 SUPERFAMILY SSF51905 266 481 3.11E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS11340 6bd89afc7349cddbc25f1ba3e661f375 672 SUPERFAMILY SSF51905 574 663 3.11E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 1.4E-46 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 SUPERFAMILY SSF52833 3 81 3.71E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 Gene3D G3DSA:3.40.30.10 2 81 3.8E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 PANTHER PTHR10168:SF85 1 81 2.0E-41 T 22-04-2016 VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 Pfam PF00462 Glutaredoxin 3 69 3.4E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 PANTHER PTHR10168 1 81 2.0E-41 T 22-04-2016 VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 3 21 5.3E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 52 65 5.3E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup VPUCM_RS09855 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 66 79 5.3E-12 T 22-04-2016 IPR014025 Glutaredoxin subgroup VPUCM_RS02855 f92553bd4a3c438164a91c43a31b311a 272 PANTHER PTHR24220 27 271 5.4E-141 T 22-04-2016 VPUCM_RS02855 f92553bd4a3c438164a91c43a31b311a 272 PANTHER PTHR24220:SF585 27 271 5.4E-141 T 22-04-2016 VPUCM_RS02855 f92553bd4a3c438164a91c43a31b311a 272 SUPERFAMILY SSF52540 22 258 6.98E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02855 f92553bd4a3c438164a91c43a31b311a 272 Pfam PF00005 ABC transporter 41 197 2.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS02855 f92553bd4a3c438164a91c43a31b311a 272 Gene3D G3DSA:3.40.50.300 19 264 8.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02855 f92553bd4a3c438164a91c43a31b311a 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS02855 f92553bd4a3c438164a91c43a31b311a 272 SMART SM00382 50 252 1.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS02855 f92553bd4a3c438164a91c43a31b311a 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 5.2E-124 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55021 383 476 7.45E-22 T 22-04-2016 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF53633 1 298 3.33E-77 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF00742 Homoserine dehydrogenase 614 810 6.6E-47 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.30.360.10 636 791 2.5E-54 T 22-04-2016 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55347 614 797 3.6E-51 T 22-04-2016 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 PIRSF PIRSF000727 1 817 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55021 303 381 1.32E-22 T 22-04-2016 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 PANTHER PTHR21499 1 471 8.7E-179 T 22-04-2016 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF01842 ACT domain 324 379 1.4E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 5.4E-132 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF13840 ACT domain 394 456 2.7E-7 T 22-04-2016 IPR027795 GATS-like ACT domain VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.40.50.720 466 635 8.7E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF00696 Amino acid kinase family 2 284 1.2E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF51735 465 636 3.94E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 PANTHER PTHR21499:SF1 1 471 8.7E-179 T 22-04-2016 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 2.6E-27 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.40.1160.10 1 49 9.8E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS02435 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.40.1160.10 111 299 9.8E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.1E-22 T 22-04-2016 VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.6E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 PANTHER PTHR30154 4 162 7.4E-106 T 22-04-2016 VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 SMART SM00344 12 121 3.2E-55 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:3.30.70.920 65 161 3.0E-32 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF54909 74 157 1.02E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:1.10.10.10 13 64 6.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05965 326bb5dbc8f43917cd6ffffb39abc121 164 PANTHER PTHR30154:SF0 4 162 7.4E-106 T 22-04-2016 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 9.2E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 PANTHER PTHR30175 1 462 9.3E-258 T 22-04-2016 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.5E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 PANTHER PTHR30175:SF4 1 462 9.3E-258 T 22-04-2016 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 SUPERFAMILY SSF55604 9 81 3.66E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 1.2E-206 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 3.9E-34 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VPUCM_RS12560 88988b9704c4ed90db093331235a7a50 474 Gene3D G3DSA:3.30.1360.60 7 83 3.8E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS15715 244c0d8273a9f758910052ffb02c9e6c 288 PANTHER PTHR42194 4 268 4.5E-60 T 22-04-2016 VPUCM_RS15715 244c0d8273a9f758910052ffb02c9e6c 288 Hamap MF_00697 UPF0276 protein . 10 282 43.986 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 VPUCM_RS15715 244c0d8273a9f758910052ffb02c9e6c 288 SUPERFAMILY SSF51658 31 256 3.17E-11 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VPUCM_RS15715 244c0d8273a9f758910052ffb02c9e6c 288 PANTHER PTHR42194:SF1 4 268 4.5E-60 T 22-04-2016 VPUCM_RS15715 244c0d8273a9f758910052ffb02c9e6c 288 Gene3D G3DSA:3.20.20.150 9 277 3.2E-99 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VPUCM_RS15715 244c0d8273a9f758910052ffb02c9e6c 288 Pfam PF05114 Protein of unknown function (DUF692) 10 272 3.6E-105 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 VPUCM_RS09340 0f7dded91ecec0ac00793d84f0d27282 310 Gene3D G3DSA:1.10.3720.10 103 307 8.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09340 0f7dded91ecec0ac00793d84f0d27282 310 PANTHER PTHR30465:SF9 20 310 1.1E-122 T 22-04-2016 VPUCM_RS09340 0f7dded91ecec0ac00793d84f0d27282 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 308 7.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09340 0f7dded91ecec0ac00793d84f0d27282 310 PANTHER PTHR30465 20 310 1.1E-122 T 22-04-2016 VPUCM_RS09340 0f7dded91ecec0ac00793d84f0d27282 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 67 1.5E-12 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VPUCM_RS09340 0f7dded91ecec0ac00793d84f0d27282 310 SUPERFAMILY SSF161098 106 291 1.57E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 SUPERFAMILY SSF52540 227 286 7.23E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 SUPERFAMILY SSF52540 501 609 7.23E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 PANTHER PTHR37291:SF1 237 413 1.1E-75 T 22-04-2016 VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 PANTHER PTHR37291:SF1 476 746 1.1E-75 T 22-04-2016 VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 Gene3D G3DSA:3.40.50.300 507 603 2.0E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 Gene3D G3DSA:3.40.50.300 216 288 2.0E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 PANTHER PTHR37291 237 413 1.1E-75 T 22-04-2016 VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 PANTHER PTHR37291 476 746 1.1E-75 T 22-04-2016 VPUCM_RS24165 79bd3ff90cdb8e201e399f5a921ad293 766 Pfam PF07728 AAA domain (dynein-related subfamily) 513 598 4.0E-10 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VPUCM_RS12860 eab2e7a73861d59a021fc43a18bfb47c 296 SUPERFAMILY SSF53067 114 283 5.18E-43 T 22-04-2016 VPUCM_RS12860 eab2e7a73861d59a021fc43a18bfb47c 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 4.1E-45 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VPUCM_RS12860 eab2e7a73861d59a021fc43a18bfb47c 296 PANTHER PTHR12862:SF5 4 277 8.6E-88 T 22-04-2016 VPUCM_RS12860 eab2e7a73861d59a021fc43a18bfb47c 296 Gene3D G3DSA:3.30.420.40 2 77 6.2E-5 T 22-04-2016 VPUCM_RS12860 eab2e7a73861d59a021fc43a18bfb47c 296 SUPERFAMILY SSF53067 1 111 9.26E-25 T 22-04-2016 VPUCM_RS12860 eab2e7a73861d59a021fc43a18bfb47c 296 PANTHER PTHR12862 4 277 8.6E-88 T 22-04-2016 VPUCM_RS05610 0022f2f4735a62d1ca04fe9271fbda08 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 2.3E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VPUCM_RS05610 0022f2f4735a62d1ca04fe9271fbda08 225 PANTHER PTHR30450:SF4 1 225 6.1E-147 T 22-04-2016 VPUCM_RS05610 0022f2f4735a62d1ca04fe9271fbda08 225 SUPERFAMILY SSF161098 11 206 1.31E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05610 0022f2f4735a62d1ca04fe9271fbda08 225 Gene3D G3DSA:1.10.3720.10 9 217 1.7E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05610 0022f2f4735a62d1ca04fe9271fbda08 225 PANTHER PTHR30450 1 225 6.1E-147 T 22-04-2016 VPUCM_RS05610 0022f2f4735a62d1ca04fe9271fbda08 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 217 1.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS02935 17ce61746a1226e7f708a1f1a601ed17 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 2.6E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VPUCM_RS02935 17ce61746a1226e7f708a1f1a601ed17 239 PIRSF PIRSF004808 1 239 5.7E-72 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VPUCM_RS02935 17ce61746a1226e7f708a1f1a601ed17 239 SUPERFAMILY SSF75217 5 175 7.19E-38 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VPUCM_RS02935 17ce61746a1226e7f708a1f1a601ed17 239 PANTHER PTHR12029 7 180 1.1E-44 T 22-04-2016 VPUCM_RS02935 17ce61746a1226e7f708a1f1a601ed17 239 Gene3D G3DSA:3.40.1280.10 3 157 1.7E-33 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VPUCM_RS02935 17ce61746a1226e7f708a1f1a601ed17 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 2.9E-84 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VPUCM_RS10010 6e85094f4febf4cc446ca65330080d73 148 PANTHER PTHR35535 6 148 4.0E-30 T 22-04-2016 VPUCM_RS10010 6e85094f4febf4cc446ca65330080d73 148 Pfam PF03724 META domain 34 141 7.3E-28 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ VPUCM_RS10010 6e85094f4febf4cc446ca65330080d73 148 PANTHER PTHR35535:SF1 6 148 4.0E-30 T 22-04-2016 VPUCM_RS04840 322ace7786dd17d884451655c19df74f 142 PANTHER PTHR23089 34 129 1.4E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VPUCM_RS04840 322ace7786dd17d884451655c19df74f 142 SUPERFAMILY SSF54197 3 133 3.4E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VPUCM_RS04840 322ace7786dd17d884451655c19df74f 142 PIRSF PIRSF000714 2 140 1.5E-53 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type VPUCM_RS04840 322ace7786dd17d884451655c19df74f 142 Gene3D G3DSA:3.30.428.10 2 133 1.2E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VPUCM_RS04840 322ace7786dd17d884451655c19df74f 142 PANTHER PTHR23089:SF13 34 129 1.4E-17 T 22-04-2016 VPUCM_RS04840 322ace7786dd17d884451655c19df74f 142 Pfam PF01230 HIT domain 11 99 3.0E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VPUCM_RS09930 13049f89c3dbc31e0f7f765cce03617a 660 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 49 660 2.2E-204 T 22-04-2016 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VPUCM_RS09930 13049f89c3dbc31e0f7f765cce03617a 660 Gene3D G3DSA:2.40.170.20 427 630 1.0E-10 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VPUCM_RS09930 13049f89c3dbc31e0f7f765cce03617a 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 59 660 1.1E-161 T 22-04-2016 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB VPUCM_RS09930 13049f89c3dbc31e0f7f765cce03617a 660 SUPERFAMILY SSF56935 426 634 4.33E-9 T 22-04-2016 VPUCM_RS06140 bd019cff95d51be4a8991ae89288ef5b 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 2.6E-68 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VPUCM_RS06140 bd019cff95d51be4a8991ae89288ef5b 204 PIRSF PIRSF000495 4 204 6.8E-64 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VPUCM_RS06140 bd019cff95d51be4a8991ae89288ef5b 204 PANTHER PTHR21235:SF1 6 203 8.4E-82 T 22-04-2016 VPUCM_RS06140 bd019cff95d51be4a8991ae89288ef5b 204 Gene3D G3DSA:3.40.50.880 3 204 2.4E-69 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS06140 bd019cff95d51be4a8991ae89288ef5b 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.456 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VPUCM_RS06140 bd019cff95d51be4a8991ae89288ef5b 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 2.2E-16 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VPUCM_RS06140 bd019cff95d51be4a8991ae89288ef5b 204 PANTHER PTHR21235 6 203 8.4E-82 T 22-04-2016 VPUCM_RS06140 bd019cff95d51be4a8991ae89288ef5b 204 SUPERFAMILY SSF52317 5 203 1.78E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 PANTHER PTHR13693:SF53 4 380 4.2E-161 T 22-04-2016 VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 380 46.097 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 SUPERFAMILY SSF53383 4 379 1.58E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 Pfam PF00155 Aminotransferase class I and II 42 372 1.0E-52 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 Gene3D G3DSA:3.90.1150.10 269 378 2.4E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 376 5.2E-136 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 PANTHER PTHR13693 4 380 4.2E-161 T 22-04-2016 VPUCM_RS06015 15fd5d8941f92f71ae9a930b91c17539 383 Gene3D G3DSA:3.40.640.10 59 268 3.9E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 PANTHER PTHR11808 1 392 4.8E-268 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 1.7E-117 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 Gene3D G3DSA:3.90.1150.10 256 389 1.3E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 PIRSF PIRSF001434 1 391 1.7E-125 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 Gene3D G3DSA:3.40.640.10 6 255 1.8E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 2.8E-172 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 PANTHER PTHR11808:SF45 1 392 4.8E-268 T 22-04-2016 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VPUCM_RS10110 b20b3ac09190329dd7df228f1d1d0274 402 SUPERFAMILY SSF53383 22 388 1.31E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS11540 2f17bbd437d33f7712159e2f4cf2057e 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 5.0E-74 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VPUCM_RS11540 2f17bbd437d33f7712159e2f4cf2057e 260 PANTHER PTHR30065 1 257 5.2E-87 T 22-04-2016 VPUCM_RS11540 2f17bbd437d33f7712159e2f4cf2057e 260 PANTHER PTHR30065:SF1 1 257 5.2E-87 T 22-04-2016 VPUCM_RS11540 2f17bbd437d33f7712159e2f4cf2057e 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 1.1E-55 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS11540 2f17bbd437d33f7712159e2f4cf2057e 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 7.9E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS11540 2f17bbd437d33f7712159e2f4cf2057e 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 7.9E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS11540 2f17bbd437d33f7712159e2f4cf2057e 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 7.9E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS11540 2f17bbd437d33f7712159e2f4cf2057e 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 7.9E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VPUCM_RS10135 29917f55174cd320d35b1c55cd7c039b 361 Pfam PF13437 HlyD family secretion protein 154 253 3.5E-8 T 22-04-2016 VPUCM_RS10135 29917f55174cd320d35b1c55cd7c039b 361 Pfam PF13533 Biotin-lipoyl like 62 103 2.5E-10 T 22-04-2016 VPUCM_RS10135 29917f55174cd320d35b1c55cd7c039b 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 354 1.8E-65 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VPUCM_RS10135 29917f55174cd320d35b1c55cd7c039b 361 Gene3D G3DSA:2.40.50.100 152 183 2.0E-17 T 22-04-2016 VPUCM_RS10135 29917f55174cd320d35b1c55cd7c039b 361 Gene3D G3DSA:2.40.50.100 61 91 2.0E-17 T 22-04-2016 VPUCM_RS10135 29917f55174cd320d35b1c55cd7c039b 361 SUPERFAMILY SSF111369 50 265 2.48E-27 T 22-04-2016 VPUCM_RS10135 29917f55174cd320d35b1c55cd7c039b 361 PANTHER PTHR30469 4 361 9.8E-108 T 22-04-2016 VPUCM_RS10135 29917f55174cd320d35b1c55cd7c039b 361 PANTHER PTHR30469:SF10 4 361 9.8E-108 T 22-04-2016 VPUCM_RS09270 097d08fcb121bbf2f5aea2f623d505d9 98 SUPERFAMILY SSF54909 1 85 5.78E-12 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS09270 097d08fcb121bbf2f5aea2f623d505d9 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 65 2.2E-9 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain VPUCM_RS09270 097d08fcb121bbf2f5aea2f623d505d9 98 Gene3D G3DSA:3.30.70.900 1 69 2.0E-8 T 22-04-2016 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 5.0E-70 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.394 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 Gene3D G3DSA:2.40.50.140 1 123 1.7E-64 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.2E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.2E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.2E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.2E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.2E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.2E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 PANTHER PTHR11652 1 116 1.6E-75 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 SUPERFAMILY SSF50249 3 123 3.0E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 5.1E-42 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS14500 1147d1f92b2f2a8adff57cc6cd7d0bff 124 PIRSF PIRSF002133 1 124 3.3E-53 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 PANTHER PTHR11260 1 221 2.5E-96 T 22-04-2016 VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 Gene3D G3DSA:1.20.1050.10 89 221 1.6E-48 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 3.3E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 PANTHER PTHR11260:SF289 1 221 2.5E-96 T 22-04-2016 VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 SUPERFAMILY SSF52833 5 89 3.01E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 2.4E-82 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 207 1.1E-4 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 Gene3D G3DSA:3.40.30.10 7 84 4.5E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS09300 652abb9ebb06f76ba8a5545fb2be583a 222 SUPERFAMILY SSF47616 88 220 1.89E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VPUCM_RS07065 0207e2725a3641effe2c655db2688951 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 8.9E-19 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VPUCM_RS07065 0207e2725a3641effe2c655db2688951 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 86 2.3E-8 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VPUCM_RS07065 0207e2725a3641effe2c655db2688951 100 SUPERFAMILY SSF143011 1 90 9.02E-5 T 22-04-2016 VPUCM_RS07065 0207e2725a3641effe2c655db2688951 100 PANTHER PTHR33755:SF5 1 97 3.0E-43 T 22-04-2016 VPUCM_RS07065 0207e2725a3641effe2c655db2688951 100 PANTHER PTHR33755 1 97 3.0E-43 T 22-04-2016 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:3.40.50.300 4 211 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.0E-58 T 22-04-2016 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 5.8E-231 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.642 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.7E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 PANTHER PTHR23115:SF151 1 392 4.5E-283 T 22-04-2016 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:2.40.30.10 300 392 5.2E-47 T 22-04-2016 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:2.40.30.10 212 298 2.3E-35 T 22-04-2016 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF50465 298 393 1.61E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 9.8E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.8E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 PANTHER PTHR23115 1 392 4.5E-283 T 22-04-2016 VPUCM_RS14485 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF52540 6 219 5.86E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14570 f8501f3b395171da03d3d40e8d176649 162 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 3.8E-28 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VPUCM_RS14570 f8501f3b395171da03d3d40e8d176649 162 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 6.2E-35 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VPUCM_RS01220 2b737742e81bed8340a9017b761b17c7 215 SMART SM00382 30 207 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS01220 2b737742e81bed8340a9017b761b17c7 215 PANTHER PTHR24220:SF117 3 214 2.5E-55 T 22-04-2016 VPUCM_RS01220 2b737742e81bed8340a9017b761b17c7 215 Gene3D G3DSA:3.40.50.300 1 210 1.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01220 2b737742e81bed8340a9017b761b17c7 215 PANTHER PTHR24220 3 214 2.5E-55 T 22-04-2016 VPUCM_RS01220 2b737742e81bed8340a9017b761b17c7 215 Pfam PF00005 ABC transporter 22 152 8.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS01220 2b737742e81bed8340a9017b761b17c7 215 SUPERFAMILY SSF52540 2 210 8.65E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01220 2b737742e81bed8340a9017b761b17c7 215 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 SUPERFAMILY SSF75445 127 198 7.19E-24 T 22-04-2016 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 3.2E-69 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 PANTHER PTHR11934 1 218 1.1E-144 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 PANTHER PTHR11934:SF11 1 218 1.1E-144 T 22-04-2016 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 Gene3D G3DSA:3.40.50.1360 1 136 1.2E-57 T 22-04-2016 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 Gene3D G3DSA:3.30.70.260 137 196 2.7E-30 T 22-04-2016 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.695 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.6E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VPUCM_RS13405 12d7aa07ffca5109659072b01e62f9a3 218 SUPERFAMILY SSF100950 1 146 4.65E-47 T 22-04-2016 VPUCM_RS08340 dd9596ecd3716d4615a8596d5d1b93bf 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 6 58 1.9E-10 T 22-04-2016 IPR008554 Glutaredoxin-like VPUCM_RS08340 dd9596ecd3716d4615a8596d5d1b93bf 66 SUPERFAMILY SSF52833 14 60 1.19E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS08340 dd9596ecd3716d4615a8596d5d1b93bf 66 Gene3D G3DSA:3.40.30.10 2 64 1.6E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS08340 dd9596ecd3716d4615a8596d5d1b93bf 66 PANTHER PTHR34386:SF2 1 64 3.1E-21 T 22-04-2016 VPUCM_RS08340 dd9596ecd3716d4615a8596d5d1b93bf 66 PANTHER PTHR34386 1 64 3.1E-21 T 22-04-2016 VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 PANTHER PTHR30046:SF2 1 239 3.5E-105 T 22-04-2016 VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 6 193 3.2E-70 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 PANTHER PTHR30046 1 239 3.5E-105 T 22-04-2016 VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 Pfam PF01514 Secretory protein of YscJ/FliF family 10 187 1.8E-23 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 5.8E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 5.8E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 5.8E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 5.8E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VPUCM_RS08785 8e1f707e30285cf29dbd11ae8ce67e19 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 5.8E-29 T 22-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 SUPERFAMILY SSF56235 43 585 9.65E-178 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 Pfam PF01019 Gamma-glutamyltranspeptidase 66 581 8.2E-165 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PANTHER PTHR11686 31 585 6.4E-277 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 52 578 5.2E-141 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 73 98 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 166 185 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 298 317 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 268 284 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 166 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 489 506 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 465 480 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 447 2.2E-67 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VPUCM_RS15700 74a4ac1a9c23714b83ec5da527290036 586 PANTHER PTHR11686:SF27 31 585 6.4E-277 T 22-04-2016 VPUCM_RS15425 4152388650525887cd105aa00404d56f 322 Pfam PF02687 FtsX-like permease family 198 317 2.7E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VPUCM_RS15425 4152388650525887cd105aa00404d56f 322 PIRSF PIRSF003097 24 318 9.4E-61 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 VPUCM_RS13300 2376c327e088b39877f70a1864f94ded 126 SUPERFAMILY SSF56214 3 125 1.31E-31 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VPUCM_RS13300 2376c327e088b39877f70a1864f94ded 126 Gene3D G3DSA:3.90.470.20 1 125 2.0E-42 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VPUCM_RS13300 2376c327e088b39877f70a1864f94ded 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 9.0E-40 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VPUCM_RS13300 2376c327e088b39877f70a1864f94ded 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.712 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VPUCM_RS13300 2376c327e088b39877f70a1864f94ded 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 3.1E-33 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VPUCM_RS13300 2376c327e088b39877f70a1864f94ded 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 4.1E-22 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VPUCM_RS13300 2376c327e088b39877f70a1864f94ded 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.2E-44 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 Gene3D G3DSA:1.20.1560.10 10 330 1.1E-49 T 22-04-2016 VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 SMART SM00382 375 594 6.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 PANTHER PTHR24221:SF261 1 595 0.0 T 22-04-2016 VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 SUPERFAMILY SSF90123 5 331 1.07E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 Gene3D G3DSA:3.40.50.300 358 587 2.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 4.6E-178 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 PANTHER PTHR24221 1 595 0.0 T 22-04-2016 VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 SUPERFAMILY SSF52540 348 580 2.51E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 Pfam PF00664 ABC transporter transmembrane region 24 292 5.0E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS09775 bb8faead9c37db181342e56d9acf4acb 595 Pfam PF00005 ABC transporter 369 512 2.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS08600 ebefb2e166dcf6034e0f8b281f12220a 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 320 1.8E-26 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 VPUCM_RS08600 ebefb2e166dcf6034e0f8b281f12220a 323 PANTHER PTHR30349 1 283 6.0E-102 T 22-04-2016 VPUCM_RS08600 ebefb2e166dcf6034e0f8b281f12220a 323 PIRSF PIRSF017082 2 323 2.2E-83 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 VPUCM_RS08600 ebefb2e166dcf6034e0f8b281f12220a 323 PANTHER PTHR30349:SF25 1 283 6.0E-102 T 22-04-2016 VPUCM_RS08600 ebefb2e166dcf6034e0f8b281f12220a 323 Gene3D G3DSA:3.40.50.1820 108 202 5.0E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS08600 ebefb2e166dcf6034e0f8b281f12220a 323 SUPERFAMILY SSF53850 105 289 5.16E-8 T 22-04-2016 VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 Pfam PF00005 ABC transporter 35 186 8.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 PANTHER PTHR24220 9 322 7.8E-157 T 22-04-2016 VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 4.2E-24 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 SMART SM00382 43 236 5.4E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 SUPERFAMILY SSF52540 8 258 8.84E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 Gene3D G3DSA:3.40.50.300 3 262 5.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 PANTHER PTHR24220:SF544 9 322 7.8E-157 T 22-04-2016 VPUCM_RS09350 14b7f438d8c59df35cfb4091a4866aac 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 7.9E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS10925 523f282c043abc443ce9d6e580b229c0 334 Gene3D G3DSA:2.40.160.10 30 334 2.2E-38 T 22-04-2016 IPR023614 Porin domain VPUCM_RS10925 523f282c043abc443ce9d6e580b229c0 334 SUPERFAMILY SSF56935 23 334 2.23E-31 T 22-04-2016 VPUCM_RS10925 523f282c043abc443ce9d6e580b229c0 334 Pfam PF13609 Gram-negative porin 7 314 4.7E-28 T 22-04-2016 VPUCM_RS19835 be14b998ce34999036f5f9434fb70bcd 227 PANTHER PTHR33678 41 223 1.5E-14 T 22-04-2016 VPUCM_RS19835 be14b998ce34999036f5f9434fb70bcd 227 PANTHER PTHR33678:SF1 41 223 1.5E-14 T 22-04-2016 VPUCM_RS19835 be14b998ce34999036f5f9434fb70bcd 227 Pfam PF03050 Transposase IS66 family 9 181 1.7E-22 T 22-04-2016 IPR004291 Transposase, IS66 VPUCM_RS00405 6a22e687223fbb2550c3ed7a27111f60 175 PANTHER PTHR11431 10 167 1.6E-46 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 VPUCM_RS00405 6a22e687223fbb2550c3ed7a27111f60 175 Pfam PF00210 Ferritin-like domain 8 143 1.2E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VPUCM_RS00405 6a22e687223fbb2550c3ed7a27111f60 175 SUPERFAMILY SSF47240 1 160 1.87E-58 T 22-04-2016 IPR009078 Ferritin-like superfamily VPUCM_RS00405 6a22e687223fbb2550c3ed7a27111f60 175 Gene3D G3DSA:1.20.1260.10 1 163 7.3E-63 T 22-04-2016 IPR012347 Ferritin-related VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 Gene3D G3DSA:3.30.70.890 209 381 1.5E-62 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 3.6E-147 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PIRSF PIRSF000530 1 385 2.6E-129 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.7E-22 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 SUPERFAMILY SSF55060 205 382 4.32E-53 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 Gene3D G3DSA:3.30.230.10 4 208 4.2E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PANTHER PTHR10457:SF6 3 386 9.2E-147 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 Pfam PF08544 GHMP kinases C terminal 280 361 2.0E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 1.1E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 SUPERFAMILY SSF54211 2 204 5.09E-65 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PANTHER PTHR10457 3 386 9.2E-147 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.058 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04235 8c963ec8014b9170178c997583b1006f 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS05880 7c08d8cc3dd3693b3f255e7858f5b047 469 SUPERFAMILY SSF116734 284 452 3.27E-14 T 22-04-2016 VPUCM_RS05880 7c08d8cc3dd3693b3f255e7858f5b047 469 SUPERFAMILY SSF116734 53 213 1.29E-19 T 22-04-2016 VPUCM_RS05880 7c08d8cc3dd3693b3f255e7858f5b047 469 Pfam PF01420 Type I restriction modification DNA specificity domain 55 172 2.2E-6 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VPUCM_RS10280 d2a2766bd98f00bcaef95fd6c4825892 249 SMART SM00382 45 232 6.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10280 d2a2766bd98f00bcaef95fd6c4825892 249 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS10280 d2a2766bd98f00bcaef95fd6c4825892 249 PANTHER PTHR24220 18 237 2.1E-123 T 22-04-2016 VPUCM_RS10280 d2a2766bd98f00bcaef95fd6c4825892 249 Pfam PF00005 ABC transporter 36 184 5.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS10280 d2a2766bd98f00bcaef95fd6c4825892 249 SUPERFAMILY SSF52540 16 237 1.16E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10280 d2a2766bd98f00bcaef95fd6c4825892 249 PANTHER PTHR24220:SF578 18 237 2.1E-123 T 22-04-2016 VPUCM_RS10280 d2a2766bd98f00bcaef95fd6c4825892 249 Gene3D G3DSA:3.40.50.300 15 236 7.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PANTHER PTHR32195 1 397 1.7E-185 T 22-04-2016 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 4.1E-110 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.3E-79 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 383 4.4E-109 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VPUCM_RS07740 ab82ecf1170a50e6a49ded8183b8a266 401 PANTHER PTHR32195:SF17 1 397 1.7E-185 T 22-04-2016 VPUCM_RS13020 493b038e33512b6348850b7cefa2c986 183 SMART SM00644 18 169 1.6E-55 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VPUCM_RS13020 493b038e33512b6348850b7cefa2c986 183 Gene3D G3DSA:3.40.80.10 5 182 2.0E-66 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VPUCM_RS13020 493b038e33512b6348850b7cefa2c986 183 PANTHER PTHR30417 4 183 1.6E-78 T 22-04-2016 VPUCM_RS13020 493b038e33512b6348850b7cefa2c986 183 SUPERFAMILY SSF55846 4 182 1.7E-65 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VPUCM_RS13020 493b038e33512b6348850b7cefa2c986 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 169 2.4E-22 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VPUCM_RS13020 493b038e33512b6348850b7cefa2c986 183 PANTHER PTHR30417:SF4 4 183 1.6E-78 T 22-04-2016 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 PANTHER PTHR21110:SF0 2 406 3.3E-158 T 22-04-2016 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 Gene3D G3DSA:3.30.70.1250 115 234 1.6E-50 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 2.4E-176 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 Gene3D G3DSA:3.40.720.10 239 406 7.9E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 Gene3D G3DSA:3.40.720.10 1 114 7.9E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.773 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 PIRSF PIRSF001491 1 406 2.4E-160 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 PANTHER PTHR21110 2 406 3.3E-158 T 22-04-2016 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 SUPERFAMILY SSF143856 118 234 9.02E-48 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 SUPERFAMILY SSF53649 1 115 1.44E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 SUPERFAMILY SSF53649 236 406 1.44E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS04065 b634410de6480c39b3737760c32d6d68 406 Pfam PF01676 Metalloenzyme superfamily 2 397 4.2E-42 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VPUCM_RS01365 6d73bcd0d2695c270f7a99a67b78021c 118 Pfam PF11333 Protein of unknown function (DUF3135) 18 97 9.0E-35 T 22-04-2016 IPR021482 Protein of unknown function DUF3135 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 2.0E-39 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 PANTHER PTHR10978 6 130 1.1E-72 T 22-04-2016 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 2.4E-28 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 Gene3D G3DSA:1.20.1300.10 6 130 5.4E-41 T 22-04-2016 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 PANTHER PTHR10978:SF4 6 130 1.1E-72 T 22-04-2016 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 SUPERFAMILY SSF81343 8 130 4.41E-34 T 22-04-2016 VPUCM_RS11815 881f8546a1215b3d7473f0cee20afff1 130 PIRSF PIRSF000178 2 130 6.3E-32 T 22-04-2016 VPUCM_RS10595 9fb7606f8f6162c6c6096aa303268f97 193 PIRSF PIRSF006305 1 193 2.0E-44 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPUCM_RS10595 9fb7606f8f6162c6c6096aa303268f97 193 PANTHER PTHR11746 124 193 3.1E-29 T 22-04-2016 VPUCM_RS10595 9fb7606f8f6162c6c6096aa303268f97 193 SUPERFAMILY SSF52972 1 187 2.68E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VPUCM_RS10595 9fb7606f8f6162c6c6096aa303268f97 193 Pfam PF02545 Maf-like protein 5 187 1.8E-44 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPUCM_RS10595 9fb7606f8f6162c6c6096aa303268f97 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.771 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPUCM_RS10595 9fb7606f8f6162c6c6096aa303268f97 193 Gene3D G3DSA:3.90.950.10 4 190 6.1E-54 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VPUCM_RS10595 9fb7606f8f6162c6c6096aa303268f97 193 PANTHER PTHR11746:SF102 124 193 3.1E-29 T 22-04-2016 VPUCM_RS10595 9fb7606f8f6162c6c6096aa303268f97 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 186 3.0E-51 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VPUCM_RS06545 5052916b11808dee662ab9d7085d44be 198 SUPERFAMILY SSF142695 19 172 6.8E-56 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VPUCM_RS06545 5052916b11808dee662ab9d7085d44be 198 PANTHER PTHR21327 21 198 1.3E-75 T 22-04-2016 VPUCM_RS06545 5052916b11808dee662ab9d7085d44be 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 23 194 1.5E-62 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VPUCM_RS06545 5052916b11808dee662ab9d7085d44be 198 PANTHER PTHR21327:SF6 21 198 1.3E-75 T 22-04-2016 VPUCM_RS06545 5052916b11808dee662ab9d7085d44be 198 Pfam PF00925 GTP cyclohydrolase II 19 171 4.7E-60 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VPUCM_RS06545 5052916b11808dee662ab9d7085d44be 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 38.928 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VPUCM_RS02245 dea8a802f95fb4a76145d5351ed32d78 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.3E-157 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02245 dea8a802f95fb4a76145d5351ed32d78 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02245 dea8a802f95fb4a76145d5351ed32d78 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02245 dea8a802f95fb4a76145d5351ed32d78 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.2E-37 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02245 dea8a802f95fb4a76145d5351ed32d78 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.429 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02245 dea8a802f95fb4a76145d5351ed32d78 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS02245 dea8a802f95fb4a76145d5351ed32d78 360 PANTHER PTHR22926:SF5 2 360 1.8E-190 T 22-04-2016 VPUCM_RS02245 dea8a802f95fb4a76145d5351ed32d78 360 PANTHER PTHR22926 2 360 1.8E-190 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS19920 6775c5935c57b1ea7636417658db8c08 119 PANTHER PTHR30007:SF21 1 52 9.7E-18 T 22-04-2016 VPUCM_RS19920 6775c5935c57b1ea7636417658db8c08 119 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 1 31 1.6E-11 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family VPUCM_RS19920 6775c5935c57b1ea7636417658db8c08 119 PANTHER PTHR30007 1 52 9.7E-18 T 22-04-2016 VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 Pfam PF00106 short chain dehydrogenase 5 189 2.8E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 SUPERFAMILY SSF51735 3 229 1.23E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 Gene3D G3DSA:3.40.50.720 3 229 1.4E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.732172E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.732172E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.000915E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.000915E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.000915E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.000915E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PANTHER PTHR24322 151 183 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS11100 29d0c8de7a9a90e84a7a5a4889b20ec0 229 PANTHER PTHR24322 7 132 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04270 32cfbb8de7c7451ee7ac38af3a419961 183 Gene3D G3DSA:3.10.490.10 1 146 9.7E-10 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VPUCM_RS04270 32cfbb8de7c7451ee7ac38af3a419961 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 8.3E-9 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VPUCM_RS04270 32cfbb8de7c7451ee7ac38af3a419961 183 SUPERFAMILY SSF110857 1 124 9.42E-17 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 PANTHER PTHR12725:SF78 2 194 1.3E-30 T 22-04-2016 VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 182 8.8E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 PANTHER PTHR12725 2 194 1.3E-30 T 22-04-2016 VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 3 187 1.3E-24 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 Gene3D G3DSA:3.40.50.1000 3 205 3.6E-32 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 1.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 1.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VPUCM_RS06800 78752ab4b29366801b0d1acbf434a94e 219 SUPERFAMILY SSF56784 3 208 7.37E-33 T 22-04-2016 IPR023214 HAD-like domain VPUCM_RS03505 a08501e6a2c48228cce9a1d723a713df 413 Pfam PF13356 Domain of unknown function (DUF4102) 21 88 4.8E-14 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 VPUCM_RS03505 a08501e6a2c48228cce9a1d723a713df 413 PANTHER PTHR30629:SF4 1 403 6.0E-95 T 22-04-2016 VPUCM_RS03505 a08501e6a2c48228cce9a1d723a713df 413 Pfam PF00589 Phage integrase family 207 378 1.8E-12 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS03505 a08501e6a2c48228cce9a1d723a713df 413 Gene3D G3DSA:1.10.443.10 206 381 2.0E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS03505 a08501e6a2c48228cce9a1d723a713df 413 PANTHER PTHR30629 1 403 6.0E-95 T 22-04-2016 VPUCM_RS03505 a08501e6a2c48228cce9a1d723a713df 413 SUPERFAMILY SSF56349 99 388 1.77E-43 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS03505 a08501e6a2c48228cce9a1d723a713df 413 Gene3D G3DSA:1.10.150.130 99 196 2.1E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VPUCM_RS09915 c34d48dfb245f823ab7c8560fee9124d 207 PIRSF PIRSF000005 1 207 1.5E-30 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VPUCM_RS09915 c34d48dfb245f823ab7c8560fee9124d 207 SUPERFAMILY SSF46626 122 205 1.14E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS09915 c34d48dfb245f823ab7c8560fee9124d 207 PANTHER PTHR33751 12 205 3.3E-15 T 22-04-2016 VPUCM_RS09915 c34d48dfb245f823ab7c8560fee9124d 207 SUPERFAMILY SSF46626 37 115 4.72E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS09915 c34d48dfb245f823ab7c8560fee9124d 207 PANTHER PTHR33751:SF3 12 205 3.3E-15 T 22-04-2016 VPUCM_RS09915 c34d48dfb245f823ab7c8560fee9124d 207 Gene3D G3DSA:1.10.760.10 20 115 1.9E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS09915 c34d48dfb245f823ab7c8560fee9124d 207 Gene3D G3DSA:1.10.760.10 119 205 1.4E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS09915 c34d48dfb245f823ab7c8560fee9124d 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 128 202 7.7E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 PANTHER PTHR11649:SF3 19 319 3.0E-124 T 22-04-2016 VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 188 9.0E-39 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.748 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 Gene3D G3DSA:3.40.50.300 22 211 7.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 SUPERFAMILY SSF52540 29 224 6.28E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 PANTHER PTHR11649 19 319 3.0E-124 T 22-04-2016 VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 Gene3D G3DSA:3.30.300.20 212 313 1.8E-39 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 3.7E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 4.8E-110 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VPUCM_RS13315 2b17c497f3976e99250fe3690daf6af2 320 SUPERFAMILY SSF54814 200 316 2.35E-41 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 SUPERFAMILY SSF56219 1 268 4.45E-86 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 Gene3D G3DSA:3.60.10.10 1 267 3.4E-84 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 PANTHER PTHR22748 1 268 1.3E-134 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 3.0E-87 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.8E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 PANTHER PTHR22748:SF7 1 268 1.3E-134 T 22-04-2016 VPUCM_RS10950 fcd30cbd87d693793e4c3f5464625657 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 9.0E-101 T 22-04-2016 VPUCM_RS13525 cf00895365bbf8877c85efbd3f7043cd 237 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VPUCM_RS13525 cf00895365bbf8877c85efbd3f7043cd 237 PANTHER PTHR10146 1 235 4.0E-112 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VPUCM_RS13525 cf00895365bbf8877c85efbd3f7043cd 237 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 8.4E-38 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VPUCM_RS13525 cf00895365bbf8877c85efbd3f7043cd 237 PIRSF PIRSF004848 1 236 9.6E-80 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VPUCM_RS13525 cf00895365bbf8877c85efbd3f7043cd 237 SUPERFAMILY SSF51419 1 228 6.28E-83 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS13525 cf00895365bbf8877c85efbd3f7043cd 237 Gene3D G3DSA:3.20.20.10 1 234 1.5E-94 T 22-04-2016 IPR029066 PLP-binding barrel VPUCM_RS13525 cf00895365bbf8877c85efbd3f7043cd 237 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.6E-91 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 PANTHER PTHR24031 4 443 5.0E-252 T 22-04-2016 VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 SMART SM00487 23 225 2.8E-57 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 SMART SM00490 257 338 1.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 Pfam PF03880 DbpA RNA binding domain 386 456 3.1E-21 T 22-04-2016 IPR005580 DbpA, RNA-binding domain VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 2.7E-26 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 Gene3D G3DSA:3.40.50.300 206 365 5.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 PANTHER PTHR24031:SF180 4 443 5.0E-252 T 22-04-2016 VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 SUPERFAMILY SSF52540 73 357 1.87E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 Gene3D G3DSA:3.40.50.300 3 205 6.0E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01585 440b7552ea167ede42854c0b1e037308 459 Pfam PF00270 DEAD/DEAH box helicase 28 195 2.9E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS06470 9f068ed3d28e1ee96d47cad288a0dec4 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 74 1.9E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS06470 9f068ed3d28e1ee96d47cad288a0dec4 92 Gene3D G3DSA:3.10.20.30 10 81 3.9E-17 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS06470 9f068ed3d28e1ee96d47cad288a0dec4 92 SUPERFAMILY SSF54292 3 81 3.67E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS06470 9f068ed3d28e1ee96d47cad288a0dec4 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VPUCM_RS02425 5a1d8f288f45c860a2d9f72c5e30b43a 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.6E-69 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VPUCM_RS02425 5a1d8f288f45c860a2d9f72c5e30b43a 160 PANTHER PTHR33254:SF1 5 160 1.0E-81 T 22-04-2016 VPUCM_RS02425 5a1d8f288f45c860a2d9f72c5e30b43a 160 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 3.6E-41 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VPUCM_RS02425 5a1d8f288f45c860a2d9f72c5e30b43a 160 Gene3D G3DSA:3.50.30.40 5 157 3.3E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VPUCM_RS02425 5a1d8f288f45c860a2d9f72c5e30b43a 160 PANTHER PTHR33254 5 160 1.0E-81 T 22-04-2016 VPUCM_RS02425 5a1d8f288f45c860a2d9f72c5e30b43a 160 SUPERFAMILY SSF89562 1 158 1.12E-47 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VPUCM_RS09805 08f0520e73dd865e78e8bab0283fe7f8 165 SMART SM00448 4 125 4.4E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS09805 08f0520e73dd865e78e8bab0283fe7f8 165 SUPERFAMILY SSF52172 1 142 6.97E-20 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS09805 08f0520e73dd865e78e8bab0283fe7f8 165 PANTHER PTHR26402 4 129 1.4E-24 T 22-04-2016 VPUCM_RS09805 08f0520e73dd865e78e8bab0283fe7f8 165 Pfam PF00072 Response regulator receiver domain 6 125 1.3E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS09805 08f0520e73dd865e78e8bab0283fe7f8 165 Gene3D G3DSA:3.40.50.2300 6 130 1.0E-19 T 22-04-2016 VPUCM_RS09805 08f0520e73dd865e78e8bab0283fe7f8 165 PANTHER PTHR26402:SF515 4 129 1.4E-24 T 22-04-2016 VPUCM_RS10390 e1a6ec9cf5fb291ead2821b9bd385370 548 PANTHER PTHR30462:SF2 1 548 9.5E-261 T 22-04-2016 VPUCM_RS10390 e1a6ec9cf5fb291ead2821b9bd385370 548 Pfam PF02470 MlaD protein 43 134 1.3E-9 T 22-04-2016 IPR003399 Mce/MlaD VPUCM_RS10390 e1a6ec9cf5fb291ead2821b9bd385370 548 Pfam PF02470 MlaD protein 287 391 1.1E-12 T 22-04-2016 IPR003399 Mce/MlaD VPUCM_RS10390 e1a6ec9cf5fb291ead2821b9bd385370 548 Pfam PF02470 MlaD protein 159 219 1.1E-7 T 22-04-2016 IPR003399 Mce/MlaD VPUCM_RS10390 e1a6ec9cf5fb291ead2821b9bd385370 548 PANTHER PTHR30462 1 548 9.5E-261 T 22-04-2016 VPUCM_RS00325 9ee5c3026ee376dcf72f42928aafd998 109 Pfam PF00893 Small Multidrug Resistance protein 7 99 6.6E-19 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 VPUCM_RS00325 9ee5c3026ee376dcf72f42928aafd998 109 PANTHER PTHR30561 7 107 7.3E-23 T 22-04-2016 VPUCM_RS00325 9ee5c3026ee376dcf72f42928aafd998 109 PANTHER PTHR30561:SF6 7 107 7.3E-23 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 VPUCM_RS00325 9ee5c3026ee376dcf72f42928aafd998 109 SUPERFAMILY SSF103481 12 107 5.89E-15 T 22-04-2016 VPUCM_RS01710 d088d5eda7f1aea258f3a8b01ce7372b 330 PANTHER PTHR30006:SF3 3 330 3.6E-127 T 22-04-2016 VPUCM_RS01710 d088d5eda7f1aea258f3a8b01ce7372b 330 SUPERFAMILY SSF53850 24 325 2.18E-68 T 22-04-2016 VPUCM_RS01710 d088d5eda7f1aea258f3a8b01ce7372b 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 1.3E-143 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 VPUCM_RS01710 d088d5eda7f1aea258f3a8b01ce7372b 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 3.2E-146 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 VPUCM_RS01710 d088d5eda7f1aea258f3a8b01ce7372b 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 3.4E-22 T 22-04-2016 VPUCM_RS01710 d088d5eda7f1aea258f3a8b01ce7372b 330 Gene3D G3DSA:3.40.190.10 22 131 3.9E-38 T 22-04-2016 VPUCM_RS01710 d088d5eda7f1aea258f3a8b01ce7372b 330 Gene3D G3DSA:3.40.190.10 244 288 3.9E-38 T 22-04-2016 VPUCM_RS01710 d088d5eda7f1aea258f3a8b01ce7372b 330 PANTHER PTHR30006 3 330 3.6E-127 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 1.4E-79 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 Gene3D G3DSA:3.40.50.740 81 181 1.0E-49 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 Gene3D G3DSA:3.40.50.740 394 504 1.0E-49 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 SUPERFAMILY SSF50692 669 817 2.49E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 Gene3D G3DSA:3.90.55.10 505 608 4.4E-33 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 PANTHER PTHR11615 328 432 0.0 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 PANTHER PTHR11615 50 306 0.0 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 PANTHER PTHR11615 448 820 0.0 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 Gene3D G3DSA:3.40.228.10 186 393 1.0E-57 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 PANTHER PTHR11615:SF133 328 432 0.0 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 PANTHER PTHR11615:SF133 50 306 0.0 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 PANTHER PTHR11615:SF133 448 820 0.0 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 SUPERFAMILY SSF53706 42 660 2.36E-167 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 Gene3D G3DSA:2.40.40.20 649 812 1.5E-55 T 22-04-2016 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 22-04-2016 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VPUCM_RS10210 3b5c32ffb0232b8053fc249f1525d903 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 7.1E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VPUCM_RS05845 1318cf0d495082b60c4b3fd0a8a0edf4 2514 Gene3D G3DSA:3.30.565.10 1562 1673 3.7E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05845 1318cf0d495082b60c4b3fd0a8a0edf4 2514 SUPERFAMILY SSF55874 21 127 1.32E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS05845 1318cf0d495082b60c4b3fd0a8a0edf4 2514 Gene3D G3DSA:3.30.565.10 12 129 5.4E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS10935 1d716beccaeb0215283f87e8d8cac576 261 PANTHER PTHR30269:SF25 4 260 2.4E-157 T 22-04-2016 VPUCM_RS10935 1d716beccaeb0215283f87e8d8cac576 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 7.2E-46 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS10935 1d716beccaeb0215283f87e8d8cac576 261 PANTHER PTHR30269 4 260 2.4E-157 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS09750 9a1b9a66876e876fb675ef83f957d61c 445 PANTHER PTHR10799:SF750 156 431 1.2E-22 T 22-04-2016 VPUCM_RS09750 9a1b9a66876e876fb675ef83f957d61c 445 SUPERFAMILY SSF55073 283 433 6.54E-41 T 22-04-2016 IPR029787 Nucleotide cyclase VPUCM_RS09750 9a1b9a66876e876fb675ef83f957d61c 445 SUPERFAMILY SSF49785 39 215 2.47E-11 T 22-04-2016 IPR008979 Galactose-binding domain-like VPUCM_RS09750 9a1b9a66876e876fb675ef83f957d61c 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 434 3.1E-42 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS09750 9a1b9a66876e876fb675ef83f957d61c 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 5.3E-38 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS09750 9a1b9a66876e876fb675ef83f957d61c 445 Gene3D G3DSA:3.30.70.270 280 433 5.9E-46 T 22-04-2016 VPUCM_RS09750 9a1b9a66876e876fb675ef83f957d61c 445 PANTHER PTHR10799 156 431 1.2E-22 T 22-04-2016 VPUCM_RS09750 9a1b9a66876e876fb675ef83f957d61c 445 SMART SM00267 267 434 1.1E-46 T 22-04-2016 IPR000160 GGDEF domain VPUCM_RS15160 fcd991cd8c3167536749dc716207c55b 232 Pfam PF07356 Protein of unknown function (DUF1481) 34 228 4.1E-57 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 VPUCM_RS15160 fcd991cd8c3167536749dc716207c55b 232 PIRSF PIRSF028160 1 232 4.1E-126 T 22-04-2016 IPR016872 Uncharacterised conserved protein UCP028160 VPUCM_RS14385 9c2a5789266c414e8e48caa10c3e2353 192 PANTHER PTHR40278 1 185 9.0E-38 T 22-04-2016 VPUCM_RS14385 9c2a5789266c414e8e48caa10c3e2353 192 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 9.5E-11 T 22-04-2016 IPR007813 Fimbrial assembly PilN VPUCM_RS14385 9c2a5789266c414e8e48caa10c3e2353 192 PANTHER PTHR40278:SF1 1 185 9.0E-38 T 22-04-2016 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 7.82E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 7.82E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 7.82E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 7.82E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 7.82E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 7.82E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 7.82E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PANTHER PTHR11958 1 454 4.6E-237 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 3.7E-98 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 PANTHER PTHR11958:SF5 1 454 4.6E-237 T 22-04-2016 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 Gene3D G3DSA:1.10.3860.10 22 445 2.6E-95 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS09515 f42751797c4553fd93e2179bd66aefa6 457 SUPERFAMILY SSF118215 29 441 1.26E-91 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 SUPERFAMILY SSF46626 307 386 6.92E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 PANTHER PTHR30333 1 394 1.1E-258 T 22-04-2016 VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 3.5E-70 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 3.0E-186 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 SUPERFAMILY SSF48695 12 187 7.18E-59 T 22-04-2016 IPR011031 Multihaem cytochrome VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 PIRSF PIRSF000014 1 394 1.2E-158 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 PANTHER PTHR30333:SF1 1 394 1.1E-258 T 22-04-2016 VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 Gene3D G3DSA:1.10.3820.10 339 345 1.2E-27 T 22-04-2016 VPUCM_RS10215 555bcee78a2dc77382ef0913578fe602 394 Gene3D G3DSA:1.10.3820.10 12 189 1.2E-27 T 22-04-2016 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 PANTHER PTHR11349 1 140 1.4E-77 T 22-04-2016 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 6.2E-59 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 SMART SM00562 3 140 5.3E-91 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 SUPERFAMILY SSF54919 1 140 2.62E-61 T 22-04-2016 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 Gene3D G3DSA:3.30.70.141 1 139 1.6E-60 T 22-04-2016 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.0E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS02985 9169a1952f56aa9b6b339c03436ccdf9 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.359 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VPUCM_RS11960 4ab690b43a97d511e5cb63f08730bd78 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 1.2E-70 T 22-04-2016 IPR011435 Protein of unknown function DUF1538 VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 Gene3D G3DSA:2.30.130.10 4 72 2.5E-27 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.623 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 SMART SM00359 3 87 1.2E-13 T 22-04-2016 IPR002478 PUA domain GO:0003723 VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 168 376 4.1E-31 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 Gene3D G3DSA:3.30.750.80 73 179 5.4E-37 T 22-04-2016 VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 SUPERFAMILY SSF88697 4 73 3.76E-17 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 PANTHER PTHR11061 3 397 4.6E-123 T 22-04-2016 VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 Gene3D G3DSA:3.40.50.150 182 396 2.2E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 PANTHER PTHR11061:SF12 3 397 4.6E-123 T 22-04-2016 VPUCM_RS08485 91e91676397da90641f3a321b8dd445e 397 SUPERFAMILY SSF53335 78 393 1.72E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS15915 c95d08a55df67828650941b4b0eda60e 268 Pfam PF07070 SpoOM protein 4 219 4.6E-77 T 22-04-2016 IPR009776 Sporulation stage 0, protein M VPUCM_RS15915 c95d08a55df67828650941b4b0eda60e 268 PANTHER PTHR40053 1 268 1.6E-85 T 22-04-2016 VPUCM_RS03475 eb1a3510ba85cc2f0542f214c72b1d7c 175 SUPERFAMILY SSF55718 44 139 1.32E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VPUCM_RS03475 eb1a3510ba85cc2f0542f214c72b1d7c 175 PANTHER PTHR10094:SF16 1 145 1.9E-65 T 22-04-2016 VPUCM_RS03475 eb1a3510ba85cc2f0542f214c72b1d7c 175 PANTHER PTHR10094 1 145 1.9E-65 T 22-04-2016 VPUCM_RS03475 eb1a3510ba85cc2f0542f214c72b1d7c 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 4.7E-19 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VPUCM_RS03475 eb1a3510ba85cc2f0542f214c72b1d7c 175 PIRSF PIRSF025550 1 174 1.1E-87 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VPUCM_RS03475 eb1a3510ba85cc2f0542f214c72b1d7c 175 Gene3D G3DSA:3.30.1050.10 32 136 1.9E-11 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VPUCM_RS09330 75be0a2317808f47030299069377c36c 538 SUPERFAMILY SSF53850 35 531 1.52E-128 T 22-04-2016 VPUCM_RS09330 75be0a2317808f47030299069377c36c 538 PANTHER PTHR30290 1 536 4.1E-164 T 22-04-2016 VPUCM_RS09330 75be0a2317808f47030299069377c36c 538 Gene3D G3DSA:3.90.76.10 47 215 2.2E-48 T 22-04-2016 VPUCM_RS09330 75be0a2317808f47030299069377c36c 538 PANTHER PTHR30290:SF10 1 536 4.1E-164 T 22-04-2016 VPUCM_RS09330 75be0a2317808f47030299069377c36c 538 PIRSF PIRSF002741 1 538 5.4E-105 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VPUCM_RS09330 75be0a2317808f47030299069377c36c 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 460 1.9E-87 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VPUCM_RS09330 75be0a2317808f47030299069377c36c 538 Gene3D G3DSA:3.10.105.10 313 504 1.5E-53 T 22-04-2016 VPUCM_RS09330 75be0a2317808f47030299069377c36c 538 Gene3D G3DSA:3.40.190.10 216 312 5.2E-27 T 22-04-2016 VPUCM_RS04025 96229fa475f19f395b76c9e719f08ad6 83 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 11 75 1.1E-26 T 22-04-2016 IPR031856 Putative bacterial antitoxin YdaS VPUCM_RS04025 96229fa475f19f395b76c9e719f08ad6 83 SUPERFAMILY SSF47413 11 71 4.5E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS04025 96229fa475f19f395b76c9e719f08ad6 83 Gene3D G3DSA:1.10.260.40 10 82 7.2E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 184 280 2.8E-32 T 22-04-2016 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:1.10.10.10 4 89 2.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 PANTHER PTHR30118:SF9 1 313 2.6E-181 T 22-04-2016 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 PANTHER PTHR30118 1 313 2.6E-181 T 22-04-2016 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 SUPERFAMILY SSF46785 7 86 2.01E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 SUPERFAMILY SSF53850 92 306 1.0E-49 T 22-04-2016 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.4E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 Pfam PF03466 LysR substrate binding domain 97 308 3.2E-30 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 92 183 1.8E-21 T 22-04-2016 VPUCM_RS15740 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 284 307 1.8E-21 T 22-04-2016 VPUCM_RS00140 b0d3ae2526220c9c1e781b34bf16eb63 207 Gene3D G3DSA:3.30.230.30 8 135 2.1E-41 T 22-04-2016 IPR001498 Impact, N-terminal VPUCM_RS00140 b0d3ae2526220c9c1e781b34bf16eb63 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 7.3E-11 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VPUCM_RS00140 b0d3ae2526220c9c1e781b34bf16eb63 207 SUPERFAMILY SSF54211 5 134 2.62E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS00140 b0d3ae2526220c9c1e781b34bf16eb63 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 1.6E-24 T 22-04-2016 IPR001498 Impact, N-terminal VPUCM_RS00140 b0d3ae2526220c9c1e781b34bf16eb63 207 PANTHER PTHR16301 1 205 9.5E-56 T 22-04-2016 IPR023582 Impact family VPUCM_RS00140 b0d3ae2526220c9c1e781b34bf16eb63 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 200 2.0E-64 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal VPUCM_RS00140 b0d3ae2526220c9c1e781b34bf16eb63 207 SUPERFAMILY SSF54980 139 204 6.62E-9 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VPUCM_RS00140 b0d3ae2526220c9c1e781b34bf16eb63 207 Gene3D G3DSA:3.30.70.240 139 205 6.7E-9 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VPUCM_RS15845 e1c859ba7a97d853484b42069f2ea61b 185 PANTHER PTHR17490:SF8 2 180 1.1E-103 T 22-04-2016 VPUCM_RS15845 e1c859ba7a97d853484b42069f2ea61b 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 3.6E-39 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VPUCM_RS15845 e1c859ba7a97d853484b42069f2ea61b 185 Pfam PF01300 Telomere recombination 10 185 1.3E-49 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VPUCM_RS15845 e1c859ba7a97d853484b42069f2ea61b 185 Gene3D G3DSA:3.90.870.10 2 185 1.7E-59 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VPUCM_RS15845 e1c859ba7a97d853484b42069f2ea61b 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.995 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VPUCM_RS15845 e1c859ba7a97d853484b42069f2ea61b 185 PANTHER PTHR17490 2 180 1.1E-103 T 22-04-2016 VPUCM_RS15845 e1c859ba7a97d853484b42069f2ea61b 185 SUPERFAMILY SSF55821 2 182 2.44E-58 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VPUCM_RS05215 90c8370907b2e08b0b8c65fedfef31e2 301 Pfam PF03601 Conserved hypothetical protein 698 15 282 5.3E-55 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VPUCM_RS05215 90c8370907b2e08b0b8c65fedfef31e2 301 PANTHER PTHR30106:SF1 1 300 2.4E-117 T 22-04-2016 VPUCM_RS05215 90c8370907b2e08b0b8c65fedfef31e2 301 PANTHER PTHR30106 1 300 2.4E-117 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 SUPERFAMILY SSF54862 107 129 5.19E-33 T 22-04-2016 VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 SUPERFAMILY SSF54862 175 349 5.19E-33 T 22-04-2016 VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.3E-41 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 PANTHER PTHR24960:SF45 4 395 2.6E-194 T 22-04-2016 VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 4.1E-29 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 Gene3D G3DSA:1.10.1060.10 225 282 2.5E-7 T 22-04-2016 VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 Gene3D G3DSA:2.60.40.10 356 471 4.5E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 Gene3D G3DSA:3.30.70.20 283 319 2.9E-6 T 22-04-2016 VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 Pfam PF12801 4Fe-4S binding domain 97 136 2.3E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 PANTHER PTHR24960 4 395 2.6E-194 T 22-04-2016 VPUCM_RS15925 617e11ddd71902a941d77a3bbb88c8e1 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 1.5E-174 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 3.8E-162 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 PIRSF PIRSF006621 1 323 4.2E-76 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 PANTHER PTHR11082:SF29 6 324 9.2E-164 T 22-04-2016 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.676 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 PANTHER PTHR11082 6 324 9.2E-164 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 Gene3D G3DSA:3.20.20.70 5 248 1.4E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 315 9.7E-96 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VPUCM_RS14280 4e6325121aa3716c2bab4f9ec5b8618e 326 SUPERFAMILY SSF51395 6 319 1.99E-75 T 22-04-2016 VPUCM_RS01490 995258917665b7f2c876eb4d7e2c5d48 179 PANTHER PTHR11994 1 178 2.9E-101 T 22-04-2016 VPUCM_RS01490 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00281 Ribosomal protein L5 24 80 2.1E-29 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal VPUCM_RS01490 995258917665b7f2c876eb4d7e2c5d48 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01490 995258917665b7f2c876eb4d7e2c5d48 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.054 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01490 995258917665b7f2c876eb4d7e2c5d48 179 Gene3D G3DSA:3.30.1440.10 2 179 1.1E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain VPUCM_RS01490 995258917665b7f2c876eb4d7e2c5d48 179 SUPERFAMILY SSF55282 4 179 1.44E-78 T 22-04-2016 IPR022803 Ribosomal protein L5 domain VPUCM_RS01490 995258917665b7f2c876eb4d7e2c5d48 179 PIRSF PIRSF002161 1 179 2.6E-66 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01490 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.5E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal VPUCM_RS01575 50852329795bb22c8dfd923d56394c44 199 Gene3D G3DSA:3.10.350.10 116 161 6.0E-4 T 22-04-2016 IPR018392 LysM domain VPUCM_RS01575 50852329795bb22c8dfd923d56394c44 199 Pfam PF04225 Opacity-associated protein A LysM-like domain 115 199 4.2E-39 T 22-04-2016 IPR007340 Opacity-associated protein A VPUCM_RS01575 50852329795bb22c8dfd923d56394c44 199 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 4.2E-7 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal VPUCM_RS14380 51cf75e5e29fc52abf1d2968b6c27101 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 3.7E-45 T 22-04-2016 IPR007445 Pilus assembly protein, PilO VPUCM_RS14380 51cf75e5e29fc52abf1d2968b6c27101 197 Gene3D G3DSA:3.30.70.60 92 196 1.5E-31 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VPUCM_RS14380 51cf75e5e29fc52abf1d2968b6c27101 197 PIRSF PIRSF016482 1 197 1.6E-68 T 22-04-2016 IPR007445 Pilus assembly protein, PilO VPUCM_RS14380 51cf75e5e29fc52abf1d2968b6c27101 197 PANTHER PTHR39555 1 196 2.1E-50 T 22-04-2016 VPUCM_RS14380 51cf75e5e29fc52abf1d2968b6c27101 197 PANTHER PTHR39555:SF1 1 196 2.1E-50 T 22-04-2016 VPUCM_RS04460 3be91933d2910760e7426ccda042773d 385 PANTHER PTHR18895 82 376 3.1E-126 T 22-04-2016 VPUCM_RS04460 3be91933d2910760e7426ccda042773d 385 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.763 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS04460 3be91933d2910760e7426ccda042773d 385 Gene3D G3DSA:3.40.50.150 193 373 2.3E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS04460 3be91933d2910760e7426ccda042773d 385 Pfam PF05175 Methyltransferase small domain 200 373 1.6E-55 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VPUCM_RS04460 3be91933d2910760e7426ccda042773d 385 SUPERFAMILY SSF53335 194 370 1.59E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS04460 3be91933d2910760e7426ccda042773d 385 PANTHER PTHR18895:SF6 82 376 3.1E-126 T 22-04-2016 VPUCM_RS04460 3be91933d2910760e7426ccda042773d 385 Pfam PF08468 Methyltransferase small domain N-terminal 48 165 4.0E-5 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS04460 3be91933d2910760e7426ccda042773d 385 PIRSF PIRSF037565 1 377 9.2E-173 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VPUCM_RS04005 511e7c2e4730c86eaedc315a5c4c46ac 99 SUPERFAMILY SSF63592 1 91 3.66E-22 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 VPUCM_RS04005 511e7c2e4730c86eaedc315a5c4c46ac 99 Pfam PF05247 Flagellar transcriptional activator (FlhD) 5 79 3.3E-10 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 VPUCM_RS04005 511e7c2e4730c86eaedc315a5c4c46ac 99 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 78 0.007 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:4.10.950.10 196 273 1.6E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 SUPERFAMILY SSF50249 2 125 1.3E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:2.30.30.30 119 195 1.2E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 SMART SM01383 42 118 1.7E-44 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.1E-130 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 PANTHER PTHR13691 1 274 5.9E-145 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.5E-32 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:2.40.50.140 1 114 1.7E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 PANTHER PTHR13691:SF5 1 274 5.9E-145 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 SMART SM01382 124 252 5.1E-92 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.9E-56 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.389 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 PIRSF PIRSF002158 13 274 5.6E-101 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01445 96fd3b1d306a8d7654030b22d23764e0 274 SUPERFAMILY SSF50104 127 272 1.68E-61 T 22-04-2016 IPR008991 Translation protein SH3-like domain VPUCM_RS15170 46944d3f60bc25eb195344475abe7389 375 PANTHER PTHR22777:SF4 1 334 4.0E-181 T 22-04-2016 VPUCM_RS15170 46944d3f60bc25eb195344475abe7389 375 PANTHER PTHR22777 1 334 4.0E-181 T 22-04-2016 VPUCM_RS15170 46944d3f60bc25eb195344475abe7389 375 Gene3D G3DSA:3.10.580.10 181 317 9.6E-18 T 22-04-2016 VPUCM_RS15170 46944d3f60bc25eb195344475abe7389 375 Pfam PF00571 CBS domain 262 313 7.5E-6 T 22-04-2016 IPR000644 CBS domain VPUCM_RS15170 46944d3f60bc25eb195344475abe7389 375 SUPERFAMILY SSF54631 181 315 1.3E-26 T 22-04-2016 VPUCM_RS15170 46944d3f60bc25eb195344475abe7389 375 Pfam PF01595 Domain of unknown function DUF21 9 177 3.4E-30 T 22-04-2016 IPR002550 Domain of unknown function DUF21 VPUCM_RS04800 3c5ff459068a7dd048fd0c7d620cc637 281 PANTHER PTHR11907 1 260 1.6E-127 T 22-04-2016 VPUCM_RS04800 3c5ff459068a7dd048fd0c7d620cc637 281 PANTHER PTHR11907:SF10 1 260 1.6E-127 T 22-04-2016 VPUCM_RS04800 3c5ff459068a7dd048fd0c7d620cc637 281 Gene3D G3DSA:3.60.20.10 1 253 1.6E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS04800 3c5ff459068a7dd048fd0c7d620cc637 281 Pfam PF13230 Glutamine amidotransferases class-II 1 260 1.6E-113 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 VPUCM_RS04800 3c5ff459068a7dd048fd0c7d620cc637 281 SUPERFAMILY SSF56235 2 253 2.83E-51 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VPUCM_RS10205 2a142666ec8871224d7c955c3965931a 579 SUPERFAMILY SSF51445 194 530 3.58E-75 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VPUCM_RS10205 2a142666ec8871224d7c955c3965931a 579 Gene3D G3DSA:3.20.20.70 187 489 1.8E-50 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS10205 2a142666ec8871224d7c955c3965931a 579 PANTHER PTHR22762 161 351 3.9E-18 T 22-04-2016 VPUCM_RS10205 2a142666ec8871224d7c955c3965931a 579 Pfam PF02065 Melibiase 163 352 2.7E-16 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.504 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 1.5E-228 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 7.0E-123 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 SUPERFAMILY SSF53720 2 449 6.68E-125 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 PANTHER PTHR11699 1 469 3.6E-286 T 22-04-2016 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 PANTHER PTHR11699:SF197 1 469 3.6E-286 T 22-04-2016 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 Gene3D G3DSA:3.40.605.10 3 256 6.5E-78 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS14600 7fa35b873fb53a43842acf19e8d6ef27 485 Gene3D G3DSA:3.40.309.10 257 442 2.5E-44 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS20830 1e909810e0b3821aaffc778a00dacf95 98 PANTHER PTHR30163:SF2 3 98 4.2E-35 T 22-04-2016 VPUCM_RS20830 1e909810e0b3821aaffc778a00dacf95 98 SUPERFAMILY SSF53955 3 97 1.97E-28 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS20830 1e909810e0b3821aaffc778a00dacf95 98 PANTHER PTHR30163 3 98 4.2E-35 T 22-04-2016 IPR011757 Lytic transglycosylase MltB VPUCM_RS20830 1e909810e0b3821aaffc778a00dacf95 98 Gene3D G3DSA:1.10.530.10 3 47 4.8E-5 T 22-04-2016 VPUCM_RS20830 1e909810e0b3821aaffc778a00dacf95 98 Pfam PF13406 Transglycosylase SLT domain 3 98 1.5E-37 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 VPUCM_RS20830 1e909810e0b3821aaffc778a00dacf95 98 Gene3D G3DSA:1.10.530.10 48 98 8.8E-17 T 22-04-2016 VPUCM_RS08460 c5bce57ffe724b3b0c85f2afd92cc219 222 PANTHER PTHR23291 1 222 1.4E-107 T 22-04-2016 IPR006214 Bax inhibitor 1-related VPUCM_RS08460 c5bce57ffe724b3b0c85f2afd92cc219 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 4.0E-45 T 22-04-2016 VPUCM_RS08460 c5bce57ffe724b3b0c85f2afd92cc219 222 PANTHER PTHR23291:SF37 1 222 1.4E-107 T 22-04-2016 VPUCM_RS06635 b50dd13303d4d90545050941802831f8 238 Pfam PF00929 Exonuclease 49 219 4.0E-13 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS06635 b50dd13303d4d90545050941802831f8 238 SUPERFAMILY SSF53098 39 226 3.64E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS06635 b50dd13303d4d90545050941802831f8 238 PANTHER PTHR30231:SF11 10 226 1.3E-68 T 22-04-2016 VPUCM_RS06635 b50dd13303d4d90545050941802831f8 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 43 228 1.1E-22 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06635 b50dd13303d4d90545050941802831f8 238 PANTHER PTHR30231 10 226 1.3E-68 T 22-04-2016 VPUCM_RS06635 b50dd13303d4d90545050941802831f8 238 Gene3D G3DSA:3.30.420.10 40 228 2.0E-46 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS06635 b50dd13303d4d90545050941802831f8 238 SMART SM00479 47 228 2.6E-21 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS00400 22f8adc194bd03375935d0eeae30559c 141 Pfam PF00582 Universal stress protein family 3 138 6.0E-22 T 22-04-2016 IPR006016 UspA GO:0006950 VPUCM_RS00400 22f8adc194bd03375935d0eeae30559c 141 PIRSF PIRSF006276 1 141 2.1E-53 T 22-04-2016 IPR006015 Universal stress protein A VPUCM_RS00400 22f8adc194bd03375935d0eeae30559c 141 Gene3D G3DSA:3.40.50.620 3 140 1.3E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS00400 22f8adc194bd03375935d0eeae30559c 141 SUPERFAMILY SSF52402 3 139 6.2E-34 T 22-04-2016 VPUCM_RS00205 312463128da5ad3db65af7c423a47f95 368 SUPERFAMILY SSF111369 58 273 1.44E-42 T 22-04-2016 VPUCM_RS00205 312463128da5ad3db65af7c423a47f95 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.3E-74 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VPUCM_RS00205 312463128da5ad3db65af7c423a47f95 368 PANTHER PTHR30469 1 364 8.4E-149 T 22-04-2016 VPUCM_RS00205 312463128da5ad3db65af7c423a47f95 368 PANTHER PTHR30469:SF11 1 364 8.4E-149 T 22-04-2016 VPUCM_RS00205 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:2.40.50.100 168 194 9.9E-16 T 22-04-2016 VPUCM_RS00205 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:2.40.50.100 70 102 9.9E-16 T 22-04-2016 VPUCM_RS00205 312463128da5ad3db65af7c423a47f95 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 1.6E-29 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VPUCM_RS00205 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:1.20.120.30 108 167 5.3E-4 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 VPUCM_RS11220 749ad53e5c622904ac670f8e9fb30776 219 Pfam PF08348 YheO-like PAS domain 14 121 2.6E-34 T 22-04-2016 IPR013559 YheO-like VPUCM_RS11220 749ad53e5c622904ac670f8e9fb30776 219 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 15 114 1.0E-52 T 22-04-2016 IPR013559 YheO-like VPUCM_RS11220 749ad53e5c622904ac670f8e9fb30776 219 Pfam PF13309 HTH domain 157 214 4.9E-15 T 22-04-2016 VPUCM_RS11220 749ad53e5c622904ac670f8e9fb30776 219 PANTHER PTHR35568 1 216 8.7E-90 T 22-04-2016 VPUCM_RS11220 749ad53e5c622904ac670f8e9fb30776 219 PANTHER PTHR35568:SF2 1 216 8.7E-90 T 22-04-2016 VPUCM_RS04315 33d2745277e4af5ec26180d521b80ca1 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 3.3E-181 T 22-04-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VPUCM_RS04315 33d2745277e4af5ec26180d521b80ca1 343 Gene3D G3DSA:2.160.10.10 173 340 3.5E-33 T 22-04-2016 VPUCM_RS04315 33d2745277e4af5ec26180d521b80ca1 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.9E-16 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VPUCM_RS04315 33d2745277e4af5ec26180d521b80ca1 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS04315 33d2745277e4af5ec26180d521b80ca1 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.107 T 22-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VPUCM_RS04315 33d2745277e4af5ec26180d521b80ca1 343 Gene3D G3DSA:3.30.60.70 131 171 2.7E-22 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VPUCM_RS04315 33d2745277e4af5ec26180d521b80ca1 343 SUPERFAMILY SSF51161 90 324 5.68E-35 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS00035 122864f015b9f9e1968da1fa4ef83d3d 223 PANTHER PTHR30614 1 223 1.9E-138 T 22-04-2016 VPUCM_RS00035 122864f015b9f9e1968da1fa4ef83d3d 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.5E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VPUCM_RS00035 122864f015b9f9e1968da1fa4ef83d3d 223 Gene3D G3DSA:1.10.3720.10 14 219 8.0E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00035 122864f015b9f9e1968da1fa4ef83d3d 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 2.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00035 122864f015b9f9e1968da1fa4ef83d3d 223 SUPERFAMILY SSF161098 13 203 2.75E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS00035 122864f015b9f9e1968da1fa4ef83d3d 223 PANTHER PTHR30614:SF16 1 223 1.9E-138 T 22-04-2016 VPUCM_RS04475 5050c4a5cc99484cb90466ca72db3c25 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 2.4E-205 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VPUCM_RS04475 5050c4a5cc99484cb90466ca72db3c25 446 PANTHER PTHR37839 1 446 5.7E-221 T 22-04-2016 VPUCM_RS04475 5050c4a5cc99484cb90466ca72db3c25 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.523 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VPUCM_RS04475 5050c4a5cc99484cb90466ca72db3c25 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 2.2E-113 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VPUCM_RS04475 5050c4a5cc99484cb90466ca72db3c25 446 PANTHER PTHR37839:SF1 1 446 5.7E-221 T 22-04-2016 VPUCM_RS04475 5050c4a5cc99484cb90466ca72db3c25 446 Pfam PF11973 NQRA C-terminal domain 261 310 1.7E-21 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VPUCM_RS10955 f2ec17442c762b2f51622e73c67ca2b6 192 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.24 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VPUCM_RS10955 f2ec17442c762b2f51622e73c67ca2b6 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.6E-61 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS10955 f2ec17442c762b2f51622e73c67ca2b6 192 PANTHER PTHR30335 2 192 1.6E-131 T 22-04-2016 VPUCM_RS10955 f2ec17442c762b2f51622e73c67ca2b6 192 PIRSF PIRSF006102 1 192 4.5E-64 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS10955 f2ec17442c762b2f51622e73c67ca2b6 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VPUCM_RS10955 f2ec17442c762b2f51622e73c67ca2b6 192 PANTHER PTHR30335:SF0 2 192 1.6E-131 T 22-04-2016 VPUCM_RS05015 1e9afbe002c9f4c5ca79e786f786e9f2 86 Pfam PF00550 Phosphopantetheine attachment site 8 80 2.5E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS05015 1e9afbe002c9f4c5ca79e786f786e9f2 86 SUPERFAMILY SSF47336 5 85 9.29E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS05015 1e9afbe002c9f4c5ca79e786f786e9f2 86 Gene3D G3DSA:1.10.1200.10 2 84 2.9E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VPUCM_RS06505 0400ac7a66907bd0fa782b7de3d5dd4e 475 SUPERFAMILY SSF48695 36 470 6.09E-164 T 22-04-2016 IPR011031 Multihaem cytochrome VPUCM_RS06505 0400ac7a66907bd0fa782b7de3d5dd4e 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 37 473 2.8E-246 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VPUCM_RS06505 0400ac7a66907bd0fa782b7de3d5dd4e 475 Gene3D G3DSA:1.20.140.10 318 444 2.4E-55 T 22-04-2016 VPUCM_RS06505 0400ac7a66907bd0fa782b7de3d5dd4e 475 Pfam PF02335 Cytochrome c552 41 470 1.5E-179 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VPUCM_RS06505 0400ac7a66907bd0fa782b7de3d5dd4e 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 58.197 T 22-04-2016 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VPUCM_RS06505 0400ac7a66907bd0fa782b7de3d5dd4e 475 Gene3D G3DSA:1.10.780.10 116 317 6.5E-19 T 22-04-2016 VPUCM_RS06505 0400ac7a66907bd0fa782b7de3d5dd4e 475 PANTHER PTHR30633 6 475 1.1E-138 T 22-04-2016 VPUCM_RS06505 0400ac7a66907bd0fa782b7de3d5dd4e 475 PIRSF PIRSF000243 24 474 2.5E-124 T 22-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 VPUCM_RS05000 b63ca81d6de5cbfdd9ea7ea7e7b93bc4 466 PANTHER PTHR24095 28 457 6.8E-22 T 22-04-2016 VPUCM_RS05000 b63ca81d6de5cbfdd9ea7ea7e7b93bc4 466 Gene3D G3DSA:3.40.50.980 17 158 5.2E-12 T 22-04-2016 VPUCM_RS05000 b63ca81d6de5cbfdd9ea7ea7e7b93bc4 466 Pfam PF13193 AMP-binding enzyme C-terminal domain 372 455 7.2E-8 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VPUCM_RS05000 b63ca81d6de5cbfdd9ea7ea7e7b93bc4 466 SUPERFAMILY SSF56801 18 465 3.4E-56 T 22-04-2016 VPUCM_RS05000 b63ca81d6de5cbfdd9ea7ea7e7b93bc4 466 Gene3D G3DSA:3.30.300.30 358 463 4.8E-16 T 22-04-2016 VPUCM_RS05000 b63ca81d6de5cbfdd9ea7ea7e7b93bc4 466 Gene3D G3DSA:3.40.50.980 159 300 6.3E-10 T 22-04-2016 VPUCM_RS05000 b63ca81d6de5cbfdd9ea7ea7e7b93bc4 466 PANTHER PTHR24095:SF195 28 457 6.8E-22 T 22-04-2016 VPUCM_RS05000 b63ca81d6de5cbfdd9ea7ea7e7b93bc4 466 Pfam PF00501 AMP-binding enzyme 19 302 8.1E-20 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS11235 9152092cb22401e1f707f5abb85b5aaf 419 Pfam PF03222 Tryptophan/tyrosine permease family 18 318 6.4E-5 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VPUCM_RS11235 9152092cb22401e1f707f5abb85b5aaf 419 PANTHER PTHR35334:SF4 1 419 5.1E-256 T 22-04-2016 VPUCM_RS11235 9152092cb22401e1f707f5abb85b5aaf 419 PANTHER PTHR35334 1 419 5.1E-256 T 22-04-2016 VPUCM_RS03355 b4cc7b2f2569b3b41cec1cdb9e4c174d 335 PANTHER PTHR34501:SF2 2 335 7.7E-88 T 22-04-2016 VPUCM_RS03355 b4cc7b2f2569b3b41cec1cdb9e4c174d 335 PANTHER PTHR34501 2 335 7.7E-88 T 22-04-2016 VPUCM_RS03355 b4cc7b2f2569b3b41cec1cdb9e4c174d 335 SUPERFAMILY SSF56935 22 335 1.53E-52 T 22-04-2016 VPUCM_RS03355 b4cc7b2f2569b3b41cec1cdb9e4c174d 335 Gene3D G3DSA:2.40.160.10 22 335 4.3E-58 T 22-04-2016 IPR023614 Porin domain VPUCM_RS03355 b4cc7b2f2569b3b41cec1cdb9e4c174d 335 Pfam PF13609 Gram-negative porin 10 300 1.6E-26 T 22-04-2016 VPUCM_RS01005 b09f6f7c5ca7faffebe3ceafe2099ce2 614 Gene3D G3DSA:3.40.720.10 251 548 2.8E-38 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS01005 b09f6f7c5ca7faffebe3ceafe2099ce2 614 PIRSF PIRSF004950 1 614 3.9E-199 T 22-04-2016 IPR012159 Inner membrane protein YejM VPUCM_RS01005 b09f6f7c5ca7faffebe3ceafe2099ce2 614 Pfam PF11893 Domain of unknown function (DUF3413) 7 242 2.7E-53 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VPUCM_RS01005 b09f6f7c5ca7faffebe3ceafe2099ce2 614 PANTHER PTHR10342:SF235 222 593 2.4E-72 T 22-04-2016 VPUCM_RS01005 b09f6f7c5ca7faffebe3ceafe2099ce2 614 Pfam PF00884 Sulfatase 251 529 2.3E-33 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VPUCM_RS01005 b09f6f7c5ca7faffebe3ceafe2099ce2 614 SUPERFAMILY SSF53649 249 571 1.57E-54 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS01005 b09f6f7c5ca7faffebe3ceafe2099ce2 614 PANTHER PTHR10342 222 593 2.4E-72 T 22-04-2016 VPUCM_RS08120 d2aecc4f3519834a4a432496e5271e67 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 138 273 8.1E-18 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VPUCM_RS08120 d2aecc4f3519834a4a432496e5271e67 278 PANTHER PTHR40572 6 278 2.5E-62 T 22-04-2016 VPUCM_RS06915 73cfa99da46ec3562d21eefd88502714 94 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 20 80 7.5E-10 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VPUCM_RS06915 73cfa99da46ec3562d21eefd88502714 94 Gene3D G3DSA:1.10.287.1080 1 82 4.0E-19 T 22-04-2016 VPUCM_RS06915 73cfa99da46ec3562d21eefd88502714 94 SUPERFAMILY SSF101386 1 93 5.56E-20 T 22-04-2016 VPUCM_RS06915 73cfa99da46ec3562d21eefd88502714 94 PANTHER PTHR14552 1 94 6.5E-14 T 22-04-2016 VPUCM_RS05660 f16c2d637fa3f6c4a5a3e55be07b7c60 85 PANTHER PTHR33359 1 85 1.6E-21 T 22-04-2016 VPUCM_RS05660 f16c2d637fa3f6c4a5a3e55be07b7c60 85 Pfam PF02597 ThiS family 4 85 6.2E-22 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VPUCM_RS05660 f16c2d637fa3f6c4a5a3e55be07b7c60 85 Gene3D G3DSA:3.10.20.30 1 85 1.4E-23 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS05660 f16c2d637fa3f6c4a5a3e55be07b7c60 85 SUPERFAMILY SSF54285 1 85 9.72E-19 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VPUCM_RS05660 f16c2d637fa3f6c4a5a3e55be07b7c60 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 2.8E-20 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.0E-64 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 SUPERFAMILY SSF52304 4 146 2.88E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-70 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 Pfam PF01220 Dehydroquinase class II 6 142 3.2E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 Gene3D G3DSA:3.40.50.9100 4 147 3.7E-69 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.015 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 PANTHER PTHR21272 2 149 1.2E-88 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS15060 800c2b25c5cc882db08ed97f660cfd23 149 PIRSF PIRSF001399 3 149 6.3E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 Pfam PF12848 ABC transporter 224 309 9.0E-22 T 22-04-2016 IPR032781 ABC-transporter extension domain VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 PANTHER PTHR19211 1 525 0.0 T 22-04-2016 VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 SUPERFAMILY SSF52540 333 516 1.62E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 PANTHER PTHR19211:SF38 1 525 0.0 T 22-04-2016 VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 Gene3D G3DSA:3.40.50.300 319 527 2.9E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 SMART SM00382 26 238 3.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 SMART SM00382 343 511 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 Pfam PF00005 ABC transporter 337 466 5.9E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 Pfam PF00005 ABC transporter 18 184 1.0E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 Gene3D G3DSA:3.40.50.300 132 281 4.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 Gene3D G3DSA:3.40.50.300 4 100 4.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07945 bf513090673affc2414c3f7f24b7b823 530 SUPERFAMILY SSF52540 7 237 8.08E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 Gene3D G3DSA:3.40.50.300 3 160 1.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 Pfam PF04408 Helicase associated domain (HA2) 388 447 1.4E-8 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 Gene3D G3DSA:3.40.50.300 200 341 2.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 PANTHER PTHR18934 3 427 3.0E-135 T 22-04-2016 VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 SMART SM00487 5 186 6.6E-13 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 SUPERFAMILY SSF52540 12 466 8.57E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 SMART SM00847 387 477 2.1E-8 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 8.4E-53 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 PIRSF PIRSF005496 1 820 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 Pfam PF00270 DEAD/DEAH box helicase 11 163 1.1E-9 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 SMART SM00490 226 327 2.7E-18 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS12925 b930e67fbcf8e7f58f337149723858dc 822 Pfam PF00271 Helicase conserved C-terminal domain 207 326 3.7E-14 T 22-04-2016 IPR001650 Helicase, C-terminal VPUCM_RS21340 bba7a34ac3cc546420468fb27a17632b 181 PANTHER PTHR24093 2 181 3.9E-43 T 22-04-2016 VPUCM_RS21340 bba7a34ac3cc546420468fb27a17632b 181 Gene3D G3DSA:2.70.150.10 61 175 2.7E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VPUCM_RS21340 bba7a34ac3cc546420468fb27a17632b 181 Pfam PF00122 E1-E2 ATPase 79 181 6.8E-28 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VPUCM_RS21340 bba7a34ac3cc546420468fb27a17632b 181 SUPERFAMILY SSF81653 111 180 5.36E-18 T 22-04-2016 VPUCM_RS21340 bba7a34ac3cc546420468fb27a17632b 181 PANTHER PTHR24093:SF126 2 181 3.9E-43 T 22-04-2016 VPUCM_RS10360 d25c179005b1e8ca29c223eaad497373 255 Pfam PF13247 4Fe-4S dicluster domain 102 196 9.4E-30 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS10360 d25c179005b1e8ca29c223eaad497373 255 PANTHER PTHR11938:SF86 47 249 5.5E-80 T 22-04-2016 VPUCM_RS10360 d25c179005b1e8ca29c223eaad497373 255 SUPERFAMILY SSF54862 47 231 1.67E-65 T 22-04-2016 VPUCM_RS10360 d25c179005b1e8ca29c223eaad497373 255 Gene3D G3DSA:3.30.70.20 121 160 9.6E-24 T 22-04-2016 VPUCM_RS10360 d25c179005b1e8ca29c223eaad497373 255 Gene3D G3DSA:3.30.70.20 161 243 5.3E-27 T 22-04-2016 VPUCM_RS10360 d25c179005b1e8ca29c223eaad497373 255 Gene3D G3DSA:3.30.70.20 52 120 2.5E-11 T 22-04-2016 VPUCM_RS10360 d25c179005b1e8ca29c223eaad497373 255 PANTHER PTHR11938 47 249 5.5E-80 T 22-04-2016 VPUCM_RS10360 d25c179005b1e8ca29c223eaad497373 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS12695 dbc986f5d8ed8f1ce7f85f0b82388405 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.5E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12695 dbc986f5d8ed8f1ce7f85f0b82388405 156 Gene3D G3DSA:3.40.50.960 3 154 1.6E-65 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12695 dbc986f5d8ed8f1ce7f85f0b82388405 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.315 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12695 dbc986f5d8ed8f1ce7f85f0b82388405 156 SUPERFAMILY SSF52121 4 154 4.58E-61 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12695 dbc986f5d8ed8f1ce7f85f0b82388405 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.4E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS12695 dbc986f5d8ed8f1ce7f85f0b82388405 156 PANTHER PTHR21058 1 155 1.5E-78 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 Gene3D G3DSA:3.40.50.620 3 158 6.7E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.596 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.5E-60 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 7.1E-51 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 7.1E-51 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 7.1E-51 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 7.1E-51 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 7.1E-51 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 PANTHER PTHR21342:SF1 1 157 3.6E-79 T 22-04-2016 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 PANTHER PTHR21342 1 157 3.6E-79 T 22-04-2016 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 64 1.1E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 SUPERFAMILY SSF52374 4 157 4.56E-45 T 22-04-2016 VPUCM_RS00975 1a4faa4350c4df0ab997c8c5fad20c1d 160 Pfam PF01467 Cytidylyltransferase-like 6 134 2.1E-20 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VPUCM_RS06985 45f9a7b90bfd0ee8447832c684229af6 195 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 33 - T 22-04-2016 IPR019844 Cold-shock conserved site VPUCM_RS06985 45f9a7b90bfd0ee8447832c684229af6 195 Pfam PF06961 Protein of unknown function (DUF1294) 106 160 3.1E-24 T 22-04-2016 IPR010718 Protein of unknown function DUF1294 VPUCM_RS06985 45f9a7b90bfd0ee8447832c684229af6 195 PANTHER PTHR12962:SF1 97 179 5.2E-26 T 22-04-2016 VPUCM_RS06985 45f9a7b90bfd0ee8447832c684229af6 195 PANTHER PTHR12962 97 179 5.2E-26 T 22-04-2016 VPUCM_RS06985 45f9a7b90bfd0ee8447832c684229af6 195 Gene3D G3DSA:2.40.50.140 2 67 2.1E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS06985 45f9a7b90bfd0ee8447832c684229af6 195 SUPERFAMILY SSF50249 2 70 4.41E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS06985 45f9a7b90bfd0ee8447832c684229af6 195 Pfam PF00313 'Cold-shock' DNA-binding domain 2 64 6.4E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VPUCM_RS06985 45f9a7b90bfd0ee8447832c684229af6 195 SMART SM00357 2 66 1.6E-11 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VPUCM_RS08325 b33b14eb037e0466fc1302ffdec75f9c 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.537 T 22-04-2016 IPR007040 Ribosome modulation factor VPUCM_RS08325 b33b14eb037e0466fc1302ffdec75f9c 57 Pfam PF04957 Ribosome modulation factor 1 54 3.1E-28 T 22-04-2016 IPR007040 Ribosome modulation factor VPUCM_RS08325 b33b14eb037e0466fc1302ffdec75f9c 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 7.0E-23 T 22-04-2016 IPR007040 Ribosome modulation factor VPUCM_RS08325 b33b14eb037e0466fc1302ffdec75f9c 57 Gene3D G3DSA:1.10.10.620 1 57 3.4E-28 T 22-04-2016 IPR023200 Ribosome modulation factor-like domain VPUCM_RS04895 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 19.086 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VPUCM_RS04895 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 5.2E-34 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VPUCM_RS04895 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Gene3D G3DSA:3.30.1070.10 33 86 2.5E-22 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VPUCM_RS04895 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 PANTHER PTHR33404 1 85 7.0E-30 T 22-04-2016 VPUCM_RS04895 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 SUPERFAMILY SSF55229 33 85 3.92E-17 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VPUCM_RS04895 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 9.2E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 PIRSF PIRSF000370 1 216 9.3E-69 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 32.74 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 Pfam PF04055 Radical SAM superfamily 20 116 2.7E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 Pfam PF13394 4Fe-4S single cluster domain 17 124 1.3E-11 T 22-04-2016 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 PANTHER PTHR11228 63 215 2.2E-46 T 22-04-2016 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 PANTHER PTHR11228 1 46 2.2E-46 T 22-04-2016 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 PANTHER PTHR11228:SF6 63 215 2.2E-46 T 22-04-2016 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 PANTHER PTHR11228:SF6 1 46 2.2E-46 T 22-04-2016 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 215 7.6E-112 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 SUPERFAMILY SSF102114 21 115 8.89E-7 T 22-04-2016 VPUCM_RS08540 87db0718721e1e69417cbb112e7f6f65 216 Gene3D G3DSA:3.20.20.70 22 115 3.6E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS08675 50af5e31a1180b9937786d50a7c0435f 94 Pfam PF09059 TyeA 6 86 2.8E-33 T 22-04-2016 IPR015144 Type III secretion system effector delivery regulator TyeA VPUCM_RS08675 50af5e31a1180b9937786d50a7c0435f 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 2.0E-36 T 22-04-2016 IPR015144 Type III secretion system effector delivery regulator TyeA VPUCM_RS08675 50af5e31a1180b9937786d50a7c0435f 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 1.0E-25 T 22-04-2016 IPR013351 Type III secretion system effector delivery regulator TyeA-related VPUCM_RS08675 50af5e31a1180b9937786d50a7c0435f 94 SUPERFAMILY SSF140591 2 92 1.88E-30 T 22-04-2016 VPUCM_RS15180 a5ecc0602444edaebe944157180c75fb 307 SUPERFAMILY SSF52283 25 120 2.32E-7 T 22-04-2016 VPUCM_RS15180 a5ecc0602444edaebe944157180c75fb 307 PANTHER PTHR10996:SF148 1 304 5.6E-117 T 22-04-2016 VPUCM_RS15180 a5ecc0602444edaebe944157180c75fb 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 1.1E-47 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VPUCM_RS15180 a5ecc0602444edaebe944157180c75fb 307 SUPERFAMILY SSF51735 93 273 6.35E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS15180 a5ecc0602444edaebe944157180c75fb 307 PANTHER PTHR10996 1 304 5.6E-117 T 22-04-2016 VPUCM_RS15180 a5ecc0602444edaebe944157180c75fb 307 Gene3D G3DSA:3.40.50.720 91 272 8.6E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS08245 39f018ba6b5f0f4b24ec04c0ed367da4 474 Pfam PF05707 Zonular occludens toxin (Zot) 2 256 9.5E-45 T 22-04-2016 IPR008900 Zona occludens toxin VPUCM_RS08245 39f018ba6b5f0f4b24ec04c0ed367da4 474 Gene3D G3DSA:3.40.50.300 170 252 9.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08245 39f018ba6b5f0f4b24ec04c0ed367da4 474 Gene3D G3DSA:3.40.50.300 1 131 9.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09305 4da980727abe6a6dc39e50b4a3debd80 345 Gene3D G3DSA:3.90.850.10 312 324 2.2E-38 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VPUCM_RS09305 4da980727abe6a6dc39e50b4a3debd80 345 Gene3D G3DSA:3.90.850.10 77 276 2.2E-38 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VPUCM_RS09305 4da980727abe6a6dc39e50b4a3debd80 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 1.3E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VPUCM_RS09305 4da980727abe6a6dc39e50b4a3debd80 345 PANTHER PTHR11820:SF85 290 345 3.3E-143 T 22-04-2016 VPUCM_RS09305 4da980727abe6a6dc39e50b4a3debd80 345 PANTHER PTHR11820:SF85 9 274 3.3E-143 T 22-04-2016 VPUCM_RS09305 4da980727abe6a6dc39e50b4a3debd80 345 PANTHER PTHR11820 290 345 3.3E-143 T 22-04-2016 VPUCM_RS09305 4da980727abe6a6dc39e50b4a3debd80 345 PANTHER PTHR11820 9 274 3.3E-143 T 22-04-2016 VPUCM_RS09305 4da980727abe6a6dc39e50b4a3debd80 345 SUPERFAMILY SSF56529 83 339 4.71E-55 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VPUCM_RS05530 14abd8bc55922100908f493ed3ce0f60 335 Gene3D G3DSA:3.40.50.300 48 123 2.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05530 14abd8bc55922100908f493ed3ce0f60 335 Gene3D G3DSA:3.40.50.300 158 169 2.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05530 14abd8bc55922100908f493ed3ce0f60 335 PANTHER PTHR30160 3 327 6.5E-98 T 22-04-2016 VPUCM_RS05530 14abd8bc55922100908f493ed3ce0f60 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 4.9E-111 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VPUCM_RS05530 14abd8bc55922100908f493ed3ce0f60 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 1.2E-95 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VPUCM_RS05530 14abd8bc55922100908f493ed3ce0f60 335 PANTHER PTHR30160:SF13 3 327 6.5E-98 T 22-04-2016 VPUCM_RS05530 14abd8bc55922100908f493ed3ce0f60 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.048 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VPUCM_RS05530 14abd8bc55922100908f493ed3ce0f60 335 SUPERFAMILY SSF52540 50 163 1.51E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01780 54ac2a32ec053567df36cbcb6a434cb3 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 7.4E-37 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE VPUCM_RS01780 54ac2a32ec053567df36cbcb6a434cb3 157 PANTHER PTHR34390 1 157 1.4E-48 T 22-04-2016 VPUCM_RS06625 bec6ae38416e1c911f8c03b4b03d24b4 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 1.4E-172 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VPUCM_RS06625 bec6ae38416e1c911f8c03b4b03d24b4 523 PANTHER PTHR30047 1 523 5.4E-224 T 22-04-2016 VPUCM_RS06625 bec6ae38416e1c911f8c03b4b03d24b4 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 VPUCM_RS06625 bec6ae38416e1c911f8c03b4b03d24b4 523 PANTHER PTHR30047:SF2 1 523 5.4E-224 T 22-04-2016 VPUCM_RS06625 bec6ae38416e1c911f8c03b4b03d24b4 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 521 4.8E-136 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 4.2E-137 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PIRSF PIRSF002869 1 517 5.7E-148 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PANTHER PTHR11206 69 84 1.5E-97 T 22-04-2016 VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PANTHER PTHR11206 226 511 1.5E-97 T 22-04-2016 VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 166 187 1.9E-76 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 54 70 1.9E-76 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 35 54 1.9E-76 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 142 166 1.9E-76 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 268 294 1.9E-76 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 418 435 1.9E-76 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 366 385 1.9E-76 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PANTHER PTHR11206:SF90 69 84 1.5E-97 T 22-04-2016 VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 PANTHER PTHR11206:SF90 226 511 1.5E-97 T 22-04-2016 VPUCM_RS02605 b0c300ef76fdbdaf70eb512676a73c6a 520 Pfam PF03023 MviN-like protein 30 483 2.6E-144 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VPUCM_RS08730 d2a77a48aac5aefd5559afc84f386ebb 304 Gene3D G3DSA:3.40.50.1820 3 304 8.2E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS08730 d2a77a48aac5aefd5559afc84f386ebb 304 Pfam PF01738 Dienelactone hydrolase family 17 134 8.2E-8 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 VPUCM_RS08730 d2a77a48aac5aefd5559afc84f386ebb 304 PANTHER PTHR17630 10 304 2.9E-88 T 22-04-2016 VPUCM_RS08730 d2a77a48aac5aefd5559afc84f386ebb 304 SUPERFAMILY SSF53474 192 304 1.36E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS08730 d2a77a48aac5aefd5559afc84f386ebb 304 SUPERFAMILY SSF53474 3 141 1.36E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS08730 d2a77a48aac5aefd5559afc84f386ebb 304 PANTHER PTHR17630:SF49 10 304 2.9E-88 T 22-04-2016 VPUCM_RS04965 7785ef421025c39530e1de55376d1d34 203 Pfam PF11659 Protein of unknown function (DUF3261) 15 173 1.1E-41 T 22-04-2016 IPR021675 Protein of unknown function DUF3261 VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 Gene3D G3DSA:2.30.30.20 101 152 1.2E-23 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 Gene3D G3DSA:3.30.70.140 2 98 1.5E-36 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.949 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 PANTHER PTHR35805:SF1 2 153 1.5E-73 T 22-04-2016 VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.5E-61 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 SUPERFAMILY SSF54893 2 100 7.72E-36 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 2.3E-19 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 SUPERFAMILY SSF57825 101 151 4.71E-16 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.3E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VPUCM_RS13900 d2f350896b8f202cebf575c8aab58b32 153 PANTHER PTHR35805 2 153 1.5E-73 T 22-04-2016 VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.124 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:2.40.30.10 3 32 1.0E-10 T 22-04-2016 VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:2.40.30.10 158 207 1.0E-10 T 22-04-2016 VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 6.7E-95 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 PANTHER PTHR11229 1 208 1.8E-125 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 SUPERFAMILY SSF50447 1 208 3.62E-84 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 Pfam PF00297 Ribosomal protein L3 93 182 1.5E-16 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01430 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:4.10.960.10 77 157 1.0E-38 T 22-04-2016 VPUCM_RS08945 4da0e676da2bd8cc008a5b7c57cf036b 128 SUPERFAMILY SSF51182 10 127 2.0E-25 T 22-04-2016 IPR011051 RmlC-like cupin domain VPUCM_RS08945 4da0e676da2bd8cc008a5b7c57cf036b 128 Pfam PF06339 Ectoine synthase 1 126 9.9E-61 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 VPUCM_RS08945 4da0e676da2bd8cc008a5b7c57cf036b 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 39.138 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 VPUCM_RS08945 4da0e676da2bd8cc008a5b7c57cf036b 128 PANTHER PTHR39289:SF1 1 128 1.2E-50 T 22-04-2016 VPUCM_RS08945 4da0e676da2bd8cc008a5b7c57cf036b 128 Gene3D G3DSA:2.60.120.10 13 111 4.0E-17 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS08945 4da0e676da2bd8cc008a5b7c57cf036b 128 PANTHER PTHR39289 1 128 1.2E-50 T 22-04-2016 VPUCM_RS08945 4da0e676da2bd8cc008a5b7c57cf036b 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 9.0E-59 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 VPUCM_RS13905 5ac54a5a25634668ef0ba7ba95ce8563 129 PANTHER PTHR11803 1 128 2.5E-52 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VPUCM_RS13905 5ac54a5a25634668ef0ba7ba95ce8563 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.2E-53 T 22-04-2016 IPR006056 RidA family VPUCM_RS13905 5ac54a5a25634668ef0ba7ba95ce8563 129 Gene3D G3DSA:3.30.1330.40 5 128 4.5E-47 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VPUCM_RS13905 5ac54a5a25634668ef0ba7ba95ce8563 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.6E-45 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VPUCM_RS13905 5ac54a5a25634668ef0ba7ba95ce8563 129 SUPERFAMILY SSF55298 2 128 3.46E-44 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VPUCM_RS13905 5ac54a5a25634668ef0ba7ba95ce8563 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 22-04-2016 IPR019897 RidA, conserved site VPUCM_RS09815 4a2292ec2c62a9a1e97ceee2e1e0e631 195 PIRSF PIRSF028788 6 195 8.7E-35 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VPUCM_RS09815 4a2292ec2c62a9a1e97ceee2e1e0e631 195 Pfam PF04994 TfoX C-terminal domain 114 192 7.6E-28 T 22-04-2016 IPR007077 TfoX, C-terminal VPUCM_RS09815 4a2292ec2c62a9a1e97ceee2e1e0e631 195 Gene3D G3DSA:1.10.150.20 114 194 4.9E-27 T 22-04-2016 VPUCM_RS09815 4a2292ec2c62a9a1e97ceee2e1e0e631 195 PANTHER PTHR36121 1 195 4.9E-43 T 22-04-2016 VPUCM_RS09815 4a2292ec2c62a9a1e97ceee2e1e0e631 195 SUPERFAMILY SSF159894 3 103 7.06E-26 T 22-04-2016 VPUCM_RS09815 4a2292ec2c62a9a1e97ceee2e1e0e631 195 Pfam PF04993 TfoX N-terminal domain 11 101 1.7E-22 T 22-04-2016 IPR007076 TfoX, N-terminal VPUCM_RS09815 4a2292ec2c62a9a1e97ceee2e1e0e631 195 PANTHER PTHR36121:SF1 1 195 4.9E-43 T 22-04-2016 VPUCM_RS09815 4a2292ec2c62a9a1e97ceee2e1e0e631 195 Gene3D G3DSA:3.30.1460.30 2 102 4.3E-26 T 22-04-2016 IPR007076 TfoX, N-terminal VPUCM_RS08450 2c9bb33174ce1afdc6230c75b708b8ae 365 SUPERFAMILY SSF161098 155 346 6.54E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08450 2c9bb33174ce1afdc6230c75b708b8ae 365 PANTHER PTHR30085:SF3 63 365 1.9E-182 T 22-04-2016 VPUCM_RS08450 2c9bb33174ce1afdc6230c75b708b8ae 365 Gene3D G3DSA:1.10.3720.10 155 360 1.2E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08450 2c9bb33174ce1afdc6230c75b708b8ae 365 PANTHER PTHR30085 63 365 1.9E-182 T 22-04-2016 VPUCM_RS08450 2c9bb33174ce1afdc6230c75b708b8ae 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 3.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08450 2c9bb33174ce1afdc6230c75b708b8ae 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 6.9E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VPUCM_RS05430 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 Gene3D G3DSA:3.40.50.1580 4 251 4.9E-84 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS05430 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 1.7E-110 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 VPUCM_RS05430 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 PANTHER PTHR21234 1 252 1.2E-180 T 22-04-2016 IPR018017 Nucleoside phosphorylase VPUCM_RS05430 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 Pfam PF01048 Phosphorylase superfamily 20 246 4.2E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS05430 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VPUCM_RS05430 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 PANTHER PTHR21234:SF22 1 252 1.2E-180 T 22-04-2016 VPUCM_RS05430 0c83ccfbaf54fae7dae23ee6a1b3fa04 252 SUPERFAMILY SSF53167 4 251 1.83E-72 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VPUCM_RS14185 c781701702b900848bf30ef5cc8f8517 592 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 2.0E-65 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VPUCM_RS14185 c781701702b900848bf30ef5cc8f8517 592 Pfam PF15864 Protein glycosylation ligase 174 199 9.3E-11 T 22-04-2016 IPR031726 Protein glycosylation ligase domain VPUCM_RS14185 c781701702b900848bf30ef5cc8f8517 592 Pfam PF04932 O-Antigen ligase 221 369 4.0E-14 T 22-04-2016 IPR007016 O-antigen ligase-related VPUCM_RS04755 317d76137e900f81f0a93763b2d47c3c 154 Gene3D G3DSA:3.30.420.10 2 149 1.2E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS04755 317d76137e900f81f0a93763b2d47c3c 154 PANTHER PTHR10642 1 152 6.9E-62 T 22-04-2016 VPUCM_RS04755 317d76137e900f81f0a93763b2d47c3c 154 Pfam PF00075 RNase H 3 141 6.6E-53 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VPUCM_RS04755 317d76137e900f81f0a93763b2d47c3c 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.438 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 VPUCM_RS04755 317d76137e900f81f0a93763b2d47c3c 154 SUPERFAMILY SSF53098 3 143 3.54E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS12955 67f846bf3734d4c80489bb4cf3c4e59d 264 Gene3D G3DSA:3.20.20.60 1 262 1.7E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS12955 67f846bf3734d4c80489bb4cf3c4e59d 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 4.2E-114 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VPUCM_RS12955 67f846bf3734d4c80489bb4cf3c4e59d 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 3.8E-108 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VPUCM_RS12955 67f846bf3734d4c80489bb4cf3c4e59d 264 PANTHER PTHR20881 1 262 9.0E-188 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VPUCM_RS12955 67f846bf3734d4c80489bb4cf3c4e59d 264 PANTHER PTHR20881:SF3 1 262 9.0E-188 T 22-04-2016 VPUCM_RS12955 67f846bf3734d4c80489bb4cf3c4e59d 264 SUPERFAMILY SSF51621 3 262 1.26E-105 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VPUCM_RS12955 67f846bf3734d4c80489bb4cf3c4e59d 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.345 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VPUCM_RS12955 67f846bf3734d4c80489bb4cf3c4e59d 264 PIRSF PIRSF000388 1 264 1.0E-100 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VPUCM_RS13985 70f431218be0d037238ebe9b0aabacbd 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 8.1E-52 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS13985 70f431218be0d037238ebe9b0aabacbd 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 7.6E-38 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS13985 70f431218be0d037238ebe9b0aabacbd 148 SUPERFAMILY SSF55804 1 145 3.92E-41 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VPUCM_RS13985 70f431218be0d037238ebe9b0aabacbd 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS13985 70f431218be0d037238ebe9b0aabacbd 148 PANTHER PTHR30505:SF6 1 145 5.0E-72 T 22-04-2016 VPUCM_RS13985 70f431218be0d037238ebe9b0aabacbd 148 PANTHER PTHR30505 1 145 5.0E-72 T 22-04-2016 VPUCM_RS13985 70f431218be0d037238ebe9b0aabacbd 148 Gene3D G3DSA:3.40.930.10 1 147 1.1E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 Gene3D G3DSA:3.40.50.1820 5 252 2.0E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 9.5E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 9.5E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 9.5E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 9.5E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PANTHER PTHR10992 5 255 4.5E-80 T 22-04-2016 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.6E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.6E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 1.6E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.6E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 3.0E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 PANTHER PTHR10992:SF768 5 255 4.5E-80 T 22-04-2016 VPUCM_RS11845 f7e0c036f5e5473e20e9e92af94cec15 255 SUPERFAMILY SSF53474 5 253 4.59E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 484 1.1E-153 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 SMART SM00155 219 246 4.0E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 SMART SM00155 397 424 9.5E-7 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 SUPERFAMILY SSF56024 66 313 3.81E-50 T 22-04-2016 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 Gene3D G3DSA:3.30.870.10 313 460 2.7E-35 T 22-04-2016 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 Gene3D G3DSA:3.30.870.10 113 312 4.0E-37 T 22-04-2016 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 1.5E-6 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 Pfam PF13091 PLD-like domain 134 267 1.0E-15 T 22-04-2016 IPR025202 Phospholipase D-like domain VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 Pfam PF13091 PLD-like domain 327 444 5.2E-24 T 22-04-2016 IPR025202 Phospholipase D-like domain VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 PANTHER PTHR21248 18 484 2.3E-255 T 22-04-2016 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 SUPERFAMILY SSF56024 273 469 1.3E-48 T 22-04-2016 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 PANTHER PTHR21248:SF9 18 484 2.3E-255 T 22-04-2016 VPUCM_RS10105 df71da99c5780d079d12a588b38283fc 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.874 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.548 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 Gene3D G3DSA:3.20.20.70 53 313 7.2E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 SMART SM00729 84 293 2.5E-19 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 PIRSF PIRSF005963 1 321 9.2E-129 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 Pfam PF04055 Radical SAM superfamily 91 251 3.4E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 7.0E-8 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 1.8E-149 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 SUPERFAMILY SSF102114 52 315 5.62E-68 T 22-04-2016 VPUCM_RS12530 4a5a1f9232f9b35bed621ca0806203c2 321 PANTHER PTHR10949 4 321 1.6E-176 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VPUCM_RS05860 affaed00114be8d4fce40b3faaa93d1a 57 Gene3D G3DSA:1.10.10.10 5 55 7.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05860 affaed00114be8d4fce40b3faaa93d1a 57 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 52 1.3E-16 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 VPUCM_RS05860 affaed00114be8d4fce40b3faaa93d1a 57 Pfam PF12728 Helix-turn-helix domain 6 54 5.7E-20 T 22-04-2016 VPUCM_RS05860 affaed00114be8d4fce40b3faaa93d1a 57 SUPERFAMILY SSF46955 5 54 4.39E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain VPUCM_RS03100 3e92cf8d21f8a2ca0190c601c502c076 298 Pfam PF08878 Domain of unknown function (DUF1837) 64 280 7.0E-37 T 22-04-2016 IPR014976 Protein of unknown function DUF1837 VPUCM_RS08190 86737506bda2bedfee54e8788321fbd1 393 SMART SM00897 28 222 2.1E-32 T 22-04-2016 IPR013702 FIST domain, N-terminal VPUCM_RS08190 86737506bda2bedfee54e8788321fbd1 393 PANTHER PTHR40252:SF2 12 393 3.3E-102 T 22-04-2016 VPUCM_RS08190 86737506bda2bedfee54e8788321fbd1 393 Pfam PF08495 FIST N domain 32 221 5.5E-24 T 22-04-2016 IPR013702 FIST domain, N-terminal VPUCM_RS08190 86737506bda2bedfee54e8788321fbd1 393 Pfam PF10442 FIST C domain 223 369 1.4E-18 T 22-04-2016 IPR019494 FIST, C-domain VPUCM_RS08190 86737506bda2bedfee54e8788321fbd1 393 PANTHER PTHR40252 12 393 3.3E-102 T 22-04-2016 VPUCM_RS08190 86737506bda2bedfee54e8788321fbd1 393 SMART SM01204 223 370 7.2E-28 T 22-04-2016 IPR019494 FIST, C-domain VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 SUPERFAMILY SSF52540 31 301 2.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 PANTHER PTHR24220 5 315 1.3E-160 T 22-04-2016 VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 5.5E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 SMART SM00382 32 238 2.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 9.6E-24 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 PANTHER PTHR24220:SF535 5 315 1.3E-160 T 22-04-2016 VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 Pfam PF00005 ABC transporter 24 180 1.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS05685 6f83282f271e149dfd713281b48f78f7 323 Gene3D G3DSA:3.40.50.300 3 260 1.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08955 0db16059fedeac53ed81fdc4767b2f1c 177 PANTHER PTHR23091 9 142 7.3E-12 T 22-04-2016 VPUCM_RS08955 0db16059fedeac53ed81fdc4767b2f1c 177 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 23 176 2.2E-69 T 22-04-2016 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178|UniPathway: UPA00067 VPUCM_RS08955 0db16059fedeac53ed81fdc4767b2f1c 177 SUPERFAMILY SSF55729 23 142 1.06E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS08955 0db16059fedeac53ed81fdc4767b2f1c 177 Gene3D G3DSA:3.40.630.30 21 175 2.5E-66 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS08955 0db16059fedeac53ed81fdc4767b2f1c 177 Pfam PF00583 Acetyltransferase (GNAT) family 67 142 5.1E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS06695 291cebfd360db5b0da263af434dac738 571 PANTHER PTHR33121 359 567 2.4E-32 T 22-04-2016 VPUCM_RS06695 291cebfd360db5b0da263af434dac738 571 Gene3D G3DSA:3.20.20.450 358 567 5.8E-41 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06695 291cebfd360db5b0da263af434dac738 571 SUPERFAMILY SSF141868 356 567 5.89E-45 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06695 291cebfd360db5b0da263af434dac738 571 PANTHER PTHR33121:SF13 359 567 2.4E-32 T 22-04-2016 VPUCM_RS06695 291cebfd360db5b0da263af434dac738 571 SMART SM00052 343 571 4.5E-19 T 22-04-2016 IPR001633 EAL domain VPUCM_RS06695 291cebfd360db5b0da263af434dac738 571 Pfam PF00563 EAL domain 358 567 1.1E-38 T 22-04-2016 IPR001633 EAL domain VPUCM_RS14285 a62113938c9df315730818a1c9f30bd3 154 Pfam PF01475 Ferric uptake regulator family 19 138 1.4E-19 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VPUCM_RS14285 a62113938c9df315730818a1c9f30bd3 154 SUPERFAMILY SSF46785 11 144 2.2E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14285 a62113938c9df315730818a1c9f30bd3 154 PANTHER PTHR33202:SF6 8 149 5.1E-65 T 22-04-2016 VPUCM_RS14285 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:1.10.10.10 11 83 3.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14285 a62113938c9df315730818a1c9f30bd3 154 PANTHER PTHR33202 8 149 5.1E-65 T 22-04-2016 VPUCM_RS09550 10d844084e03876ceaafbad66d51a06b 257 SUPERFAMILY SSF81301 63 215 9.16E-16 T 22-04-2016 VPUCM_RS09550 10d844084e03876ceaafbad66d51a06b 257 Gene3D G3DSA:3.30.460.10 104 189 3.8E-5 T 22-04-2016 VPUCM_RS04880 e6db8fabb972287785f086351b410caf 284 SUPERFAMILY SSF53474 3 282 4.02E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS04880 e6db8fabb972287785f086351b410caf 284 PANTHER PTHR10992 1 283 4.8E-35 T 22-04-2016 VPUCM_RS04880 e6db8fabb972287785f086351b410caf 284 Gene3D G3DSA:3.40.50.1820 2 281 5.4E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS04880 e6db8fabb972287785f086351b410caf 284 PANTHER PTHR10992:SF699 1 283 4.8E-35 T 22-04-2016 VPUCM_RS04880 e6db8fabb972287785f086351b410caf 284 Pfam PF00561 alpha/beta hydrolase fold 27 264 5.5E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS14980 1d886d8bfeaab0f452750d55a3e4d41c 172 PANTHER PTHR35335 1 167 6.3E-44 T 22-04-2016 VPUCM_RS14980 1d886d8bfeaab0f452750d55a3e4d41c 172 PANTHER PTHR35335:SF1 1 167 6.3E-44 T 22-04-2016 VPUCM_RS14980 1d886d8bfeaab0f452750d55a3e4d41c 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.9E-34 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 SUPERFAMILY SSF51726 5 393 5.62E-109 T 22-04-2016 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 Gene3D G3DSA:3.20.20.210 392 760 7.1E-130 T 22-04-2016 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 PANTHER PTHR30519 1 760 0.0 T 22-04-2016 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 SUPERFAMILY SSF51726 396 757 1.44E-113 T 22-04-2016 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 5.7E-149 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 PANTHER PTHR30519:SF0 1 760 0.0 T 22-04-2016 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.934 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 PIRSF PIRSF000382 2 760 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 4.0E-121 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 Gene3D G3DSA:3.20.20.210 4 386 4.8E-147 T 22-04-2016 VPUCM_RS06275 d7b141076a990dead5d56c40d206db3d 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 758 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VPUCM_RS11775 1bc868831dc5187cfb7989f971c70c00 215 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 5.3E-77 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VPUCM_RS11775 1bc868831dc5187cfb7989f971c70c00 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.653 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VPUCM_RS11775 1bc868831dc5187cfb7989f971c70c00 215 Pfam PF00551 Formyl transferase 2 181 5.8E-62 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS11775 1bc868831dc5187cfb7989f971c70c00 215 SUPERFAMILY SSF53328 2 202 2.88E-66 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS11775 1bc868831dc5187cfb7989f971c70c00 215 Gene3D G3DSA:3.40.50.170 2 199 2.0E-69 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS11775 1bc868831dc5187cfb7989f971c70c00 215 PANTHER PTHR10520 1 194 2.6E-101 T 22-04-2016 VPUCM_RS11775 1bc868831dc5187cfb7989f971c70c00 215 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 PANTHER PTHR22777 28 291 9.7E-115 T 22-04-2016 VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 SUPERFAMILY SSF56176 209 291 3.27E-23 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM01091 211 289 2.4E-30 T 22-04-2016 IPR005170 Transporter-associated domain VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 Gene3D G3DSA:3.30.465.10 204 290 8.0E-30 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF00571 CBS domain 75 132 1.6E-8 T 22-04-2016 IPR000644 CBS domain VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF00571 CBS domain 145 195 1.5E-6 T 22-04-2016 IPR000644 CBS domain VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 PANTHER PTHR22777:SF17 28 291 9.7E-115 T 22-04-2016 VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM00116 147 195 0.028 T 22-04-2016 IPR000644 CBS domain VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM00116 84 133 0.0024 T 22-04-2016 IPR000644 CBS domain VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 Gene3D G3DSA:3.10.580.10 61 203 3.2E-25 T 22-04-2016 VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF03471 Transporter associated domain 212 287 3.1E-22 T 22-04-2016 IPR005170 Transporter-associated domain VPUCM_RS12460 64b5a714d0d24aa0c35845b8358230f4 299 SUPERFAMILY SSF54631 65 206 9.1E-34 T 22-04-2016 VPUCM_RS08420 7628be1129e5a72ec7c4479b5f7aa499 165 SUPERFAMILY SSF54637 12 126 6.34E-15 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS08420 7628be1129e5a72ec7c4479b5f7aa499 165 Pfam PF14539 Domain of unknown function (DUF4442) 18 105 2.9E-10 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 VPUCM_RS08420 7628be1129e5a72ec7c4479b5f7aa499 165 Gene3D G3DSA:3.10.129.10 11 157 7.9E-26 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS11520 f9ceb44509f52cee5f5f6a49c3a6161c 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 213 2.8E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VPUCM_RS11520 f9ceb44509f52cee5f5f6a49c3a6161c 295 PIRSF PIRSF003092 6 287 7.2E-86 T 22-04-2016 IPR025501 ATP binding protein MinD VPUCM_RS11520 f9ceb44509f52cee5f5f6a49c3a6161c 295 PANTHER PTHR13696 1 274 1.1E-131 T 22-04-2016 VPUCM_RS11520 f9ceb44509f52cee5f5f6a49c3a6161c 295 PANTHER PTHR13696:SF3 1 274 1.1E-131 T 22-04-2016 VPUCM_RS11520 f9ceb44509f52cee5f5f6a49c3a6161c 295 Gene3D G3DSA:3.40.50.300 22 261 1.0E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11520 f9ceb44509f52cee5f5f6a49c3a6161c 295 SUPERFAMILY SSF52540 22 282 1.82E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 PANTHER PTHR11731 1 114 4.8E-120 T 22-04-2016 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 PANTHER PTHR11731 172 440 4.8E-120 T 22-04-2016 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 Pfam PF07676 WD40-like Beta Propeller Repeat 249 283 1.2E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 Pfam PF07676 WD40-like Beta Propeller Repeat 292 328 3.9E-14 T 22-04-2016 IPR011659 WD40-like Beta Propeller VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 Pfam PF07676 WD40-like Beta Propeller Repeat 214 240 2.7E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 Gene3D G3DSA:3.40.50.10070 16 164 1.7E-52 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 SUPERFAMILY SSF69304 168 440 1.31E-57 T 22-04-2016 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 Gene3D G3DSA:2.130.10.10 165 440 2.1E-78 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 SUPERFAMILY SSF52964 21 173 9.02E-42 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 Hamap MF_00671 Protein TolB [tolB]. 2 438 35.754 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 9 439 2.8E-168 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 PANTHER PTHR11731:SF123 1 114 4.8E-120 T 22-04-2016 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 PANTHER PTHR11731:SF123 172 440 4.8E-120 T 22-04-2016 VPUCM_RS10685 a6c073630c2e483ddd02f497f4458816 442 Pfam PF04052 TolB amino-terminal domain 16 118 6.6E-36 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VPUCM_RS00490 185615abce608020c1c020592ee76188 514 Pfam PF02646 RmuC family 181 477 9.2E-107 T 22-04-2016 IPR003798 DNA recombination RmuC VPUCM_RS00490 185615abce608020c1c020592ee76188 514 PANTHER PTHR30563 1 511 4.2E-134 T 22-04-2016 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 SUPERFAMILY SSF47060 3 89 6.47E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 PANTHER PTHR23321 1 89 6.4E-46 T 22-04-2016 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 Gene3D G3DSA:1.10.287.10 3 89 5.2E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.2E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-36 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 SMART SM01387 8 88 7.7E-53 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.754 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS03435 b089093ee1dd8ac912ad623eda7dd280 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-30 T 22-04-2016 VPUCM_RS03130 0f13211df1d38cb525325ca3058ca744 196 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VPUCM_RS03130 0f13211df1d38cb525325ca3058ca744 196 Pfam PF01184 GPR1/FUN34/yaaH family 3 174 6.1E-35 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VPUCM_RS03130 0f13211df1d38cb525325ca3058ca744 196 PANTHER PTHR30178:SF6 1 187 1.8E-130 T 22-04-2016 VPUCM_RS03130 0f13211df1d38cb525325ca3058ca744 196 PANTHER PTHR30178 1 187 1.8E-130 T 22-04-2016 VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 PANTHER PTHR11938:SF85 1 160 5.8E-83 T 22-04-2016 VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 166 1.7E-83 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 PANTHER PTHR11938 1 160 5.8E-83 T 22-04-2016 VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Pfam PF12800 4Fe-4S binding domain 14 28 0.097 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Pfam PF13247 4Fe-4S dicluster domain 61 156 3.7E-30 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Gene3D G3DSA:3.30.70.20 142 189 4.3E-30 T 22-04-2016 VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Gene3D G3DSA:3.30.70.20 6 74 4.3E-30 T 22-04-2016 VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Gene3D G3DSA:3.30.70.20 107 141 9.4E-16 T 22-04-2016 VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 SUPERFAMILY SSF54862 1 202 9.0E-70 T 22-04-2016 VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Gene3D G3DSA:3.30.70.20 75 106 4.0E-12 T 22-04-2016 VPUCM_RS07840 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VPUCM_RS09060 29c54c018495651046720b03a429fac8 211 Pfam PF01810 LysE type translocator 15 208 1.9E-33 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS09060 29c54c018495651046720b03a429fac8 211 PANTHER PTHR30086 1 210 3.8E-93 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS09060 29c54c018495651046720b03a429fac8 211 PANTHER PTHR30086:SF2 1 210 3.8E-93 T 22-04-2016 VPUCM_RS09060 29c54c018495651046720b03a429fac8 211 PIRSF PIRSF006324 1 209 9.3E-57 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS09910 cf35625d577295d0e83a76ca176ed92d 194 SUPERFAMILY SSF48695 19 181 7.68E-32 T 22-04-2016 IPR011031 Multihaem cytochrome VPUCM_RS09910 cf35625d577295d0e83a76ca176ed92d 194 Gene3D G3DSA:1.10.3820.10 10 180 2.5E-21 T 22-04-2016 VPUCM_RS09910 cf35625d577295d0e83a76ca176ed92d 194 PIRSF PIRSF000013 1 193 8.3E-80 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VPUCM_RS09910 cf35625d577295d0e83a76ca176ed92d 194 PANTHER PTHR30333:SF1 4 181 7.6E-47 T 22-04-2016 VPUCM_RS09910 cf35625d577295d0e83a76ca176ed92d 194 PANTHER PTHR30333 4 181 7.6E-47 T 22-04-2016 VPUCM_RS09910 cf35625d577295d0e83a76ca176ed92d 194 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 181 5.1E-56 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VPUCM_RS08425 9c8dbea4f86ec0ac3352f6a3f793dd05 350 PANTHER PTHR21225:SF6 1 348 6.5E-261 T 22-04-2016 VPUCM_RS08425 9c8dbea4f86ec0ac3352f6a3f793dd05 350 Pfam PF00793 DAHP synthetase I family 44 338 1.3E-98 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VPUCM_RS08425 9c8dbea4f86ec0ac3352f6a3f793dd05 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 2.7E-158 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS08425 9c8dbea4f86ec0ac3352f6a3f793dd05 350 PANTHER PTHR21225 1 348 6.5E-261 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS08425 9c8dbea4f86ec0ac3352f6a3f793dd05 350 SUPERFAMILY SSF51569 8 347 1.93E-130 T 22-04-2016 VPUCM_RS08425 9c8dbea4f86ec0ac3352f6a3f793dd05 350 Gene3D G3DSA:3.20.20.70 11 348 2.1E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS08425 9c8dbea4f86ec0ac3352f6a3f793dd05 350 PIRSF PIRSF001361 1 350 1.8E-153 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.8E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 Pfam PF03466 LysR substrate binding domain 98 299 1.9E-19 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 Gene3D G3DSA:1.10.10.10 9 85 4.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 SUPERFAMILY SSF53850 98 300 6.33E-19 T 22-04-2016 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 SUPERFAMILY SSF46785 10 92 1.85E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 Gene3D G3DSA:3.40.190.10 100 185 4.3E-13 T 22-04-2016 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 PANTHER PTHR30346:SF4 7 296 2.1E-64 T 22-04-2016 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 PANTHER PTHR30346 7 296 2.1E-64 T 22-04-2016 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 Gene3D G3DSA:3.40.190.10 186 271 2.1E-15 T 22-04-2016 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS00355 83d3efee894a8ccb92aa26c36fe102b7 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS10425 73c7a3f0ea890c7305b8c1617f36a20b 612 SUPERFAMILY SSF53850 45 566 1.28E-93 T 22-04-2016 VPUCM_RS10425 73c7a3f0ea890c7305b8c1617f36a20b 612 PANTHER PTHR30290 48 586 9.7E-62 T 22-04-2016 VPUCM_RS10425 73c7a3f0ea890c7305b8c1617f36a20b 612 PIRSF PIRSF002741 3 573 3.8E-66 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VPUCM_RS10425 73c7a3f0ea890c7305b8c1617f36a20b 612 Gene3D G3DSA:3.90.76.10 89 165 6.7E-21 T 22-04-2016 VPUCM_RS10425 73c7a3f0ea890c7305b8c1617f36a20b 612 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 490 1.4E-60 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VPUCM_RS10425 73c7a3f0ea890c7305b8c1617f36a20b 612 Gene3D G3DSA:3.10.105.10 338 544 4.0E-42 T 22-04-2016 VPUCM_RS10425 73c7a3f0ea890c7305b8c1617f36a20b 612 Gene3D G3DSA:3.40.190.10 166 337 2.3E-16 T 22-04-2016 VPUCM_RS07060 07a6a202893a412214c95c46d4340605 85 PANTHER PTHR33713 1 85 9.0E-66 T 22-04-2016 VPUCM_RS07060 07a6a202893a412214c95c46d4340605 85 SUPERFAMILY SSF143120 1 75 6.1E-17 T 22-04-2016 VPUCM_RS07060 07a6a202893a412214c95c46d4340605 85 Gene3D G3DSA:3.40.1620.10 23 49 4.8E-7 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VPUCM_RS07060 07a6a202893a412214c95c46d4340605 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.0E-15 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VPUCM_RS07060 07a6a202893a412214c95c46d4340605 85 PANTHER PTHR33713:SF3 1 85 9.0E-66 T 22-04-2016 VPUCM_RS07060 07a6a202893a412214c95c46d4340605 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VPUCM_RS05595 b9b4c696bda6d26d8f47d9cc28fd906f 256 PIRSF PIRSF039085 3 256 2.0E-116 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VPUCM_RS05595 b9b4c696bda6d26d8f47d9cc28fd906f 256 Gene3D G3DSA:3.40.50.300 6 253 3.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05595 b9b4c696bda6d26d8f47d9cc28fd906f 256 SUPERFAMILY SSF52540 7 251 2.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05595 b9b4c696bda6d26d8f47d9cc28fd906f 256 Pfam PF00005 ABC transporter 22 181 1.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS05595 b9b4c696bda6d26d8f47d9cc28fd906f 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS05595 b9b4c696bda6d26d8f47d9cc28fd906f 256 PANTHER PTHR24220:SF472 8 255 2.2E-160 T 22-04-2016 VPUCM_RS05595 b9b4c696bda6d26d8f47d9cc28fd906f 256 SMART SM00382 31 229 1.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05595 b9b4c696bda6d26d8f47d9cc28fd906f 256 PANTHER PTHR24220 8 255 2.2E-160 T 22-04-2016 VPUCM_RS03690 a598f9b3dc3866a78a78e69f1d7af5b2 93 Pfam PF07178 TraL protein 5 91 4.0E-29 T 22-04-2016 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 VPUCM_RS03690 a598f9b3dc3866a78a78e69f1d7af5b2 93 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 91 1.5E-15 T 22-04-2016 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 VPUCM_RS00870 0d1759a8d38172319bfdbc16fe96f788 270 Gene3D G3DSA:3.40.50.300 4 256 1.2E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00870 0d1759a8d38172319bfdbc16fe96f788 270 PANTHER PTHR24220:SF336 7 268 2.0E-139 T 22-04-2016 VPUCM_RS00870 0d1759a8d38172319bfdbc16fe96f788 270 SUPERFAMILY SSF52540 6 254 2.96E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00870 0d1759a8d38172319bfdbc16fe96f788 270 SMART SM00382 40 240 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00870 0d1759a8d38172319bfdbc16fe96f788 270 Pfam PF00005 ABC transporter 32 181 5.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS00870 0d1759a8d38172319bfdbc16fe96f788 270 PANTHER PTHR24220 7 268 2.0E-139 T 22-04-2016 VPUCM_RS00870 0d1759a8d38172319bfdbc16fe96f788 270 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 Gene3D G3DSA:3.40.190.10 136 209 3.5E-23 T 22-04-2016 VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 SUPERFAMILY SSF53850 1 253 5.18E-69 T 22-04-2016 VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 249 4.9E-81 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 Gene3D G3DSA:3.40.190.10 7 135 1.3E-44 T 22-04-2016 VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 250 1.1E-61 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 SMART SM00062 26 252 1.6E-69 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 PANTHER PTHR18966:SF152 18 249 1.8E-55 T 22-04-2016 VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 SMART SM00079 26 251 3.5E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 PANTHER PTHR18966 18 249 1.8E-55 T 22-04-2016 VPUCM_RS05600 4b512c68d8a0bd2707e4b3979fe1c6ae 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VPUCM_RS12760 d2de917bb5b4dd172425efd484822c4a 356 Gene3D G3DSA:3.40.630.10 35 232 4.8E-25 T 22-04-2016 VPUCM_RS12760 d2de917bb5b4dd172425efd484822c4a 356 PIRSF PIRSF039012 3 325 1.9E-92 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VPUCM_RS12760 d2de917bb5b4dd172425efd484822c4a 356 PANTHER PTHR37326 9 337 4.8E-117 T 22-04-2016 VPUCM_RS12760 d2de917bb5b4dd172425efd484822c4a 356 SUPERFAMILY SSF53187 22 318 2.25E-76 T 22-04-2016 VPUCM_RS12760 d2de917bb5b4dd172425efd484822c4a 356 PANTHER PTHR37326:SF1 9 337 4.8E-117 T 22-04-2016 VPUCM_RS12760 d2de917bb5b4dd172425efd484822c4a 356 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 6.1E-73 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VPUCM_RS12760 d2de917bb5b4dd172425efd484822c4a 356 Gene3D G3DSA:2.40.50.100 248 316 3.8E-6 T 22-04-2016 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 2.6E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 3.9E-207 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 SUPERFAMILY SSF55604 438 510 2.62E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 PANTHER PTHR30009 265 523 2.8E-238 T 22-04-2016 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 PANTHER PTHR30009 4 249 2.8E-238 T 22-04-2016 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 1.1E-66 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 Gene3D G3DSA:3.30.1360.60 436 511 5.3E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 PANTHER PTHR30009:SF4 265 523 2.8E-238 T 22-04-2016 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 PANTHER PTHR30009:SF4 4 249 2.8E-238 T 22-04-2016 VPUCM_RS11875 378e01daad181bacd619d4ad61df577e 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 6.6E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 PANTHER PTHR24096:SF193 8 600 1.1E-225 T 22-04-2016 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 Pfam PF00501 AMP-binding enzyme 14 466 5.6E-100 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 SUPERFAMILY SSF56801 7 285 5.23E-115 T 22-04-2016 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 SUPERFAMILY SSF56801 336 596 5.23E-115 T 22-04-2016 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 Gene3D G3DSA:3.40.50.980 8 188 2.9E-31 T 22-04-2016 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 PANTHER PTHR24096 8 600 1.1E-225 T 22-04-2016 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 Gene3D G3DSA:2.30.38.10 401 460 2.9E-19 T 22-04-2016 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 Gene3D G3DSA:3.40.50.980 189 280 2.6E-31 T 22-04-2016 VPUCM_RS01870 c951dc25334f8010c9c76560f03d30b9 602 Gene3D G3DSA:3.40.50.980 333 388 2.6E-31 T 22-04-2016 VPUCM_RS10880 7b246c19bde653fe75142e52a552f3fa 233 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 37.358 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VPUCM_RS10880 7b246c19bde653fe75142e52a552f3fa 233 PANTHER PTHR21367:SF0 8 232 1.3E-67 T 22-04-2016 VPUCM_RS10880 7b246c19bde653fe75142e52a552f3fa 233 SUPERFAMILY SSF55729 80 232 1.22E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10880 7b246c19bde653fe75142e52a552f3fa 233 PANTHER PTHR21367 8 232 1.3E-67 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase VPUCM_RS10880 7b246c19bde653fe75142e52a552f3fa 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 3.9E-19 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 VPUCM_RS10880 7b246c19bde653fe75142e52a552f3fa 233 PIRSF PIRSF037208 1 233 2.2E-90 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VPUCM_RS10880 7b246c19bde653fe75142e52a552f3fa 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 7.5E-32 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 VPUCM_RS11275 40fc7627d5203e7ec0da394261d0d3fa 368 SMART SM00448 20 132 1.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS11275 40fc7627d5203e7ec0da394261d0d3fa 368 Gene3D G3DSA:3.40.50.2300 22 140 1.4E-34 T 22-04-2016 VPUCM_RS11275 40fc7627d5203e7ec0da394261d0d3fa 368 PANTHER PTHR26402 20 137 2.1E-36 T 22-04-2016 VPUCM_RS11275 40fc7627d5203e7ec0da394261d0d3fa 368 SUPERFAMILY SSF52172 19 137 1.38E-34 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS11275 40fc7627d5203e7ec0da394261d0d3fa 368 Pfam PF00072 Response regulator receiver domain 22 132 7.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 PANTHER PTHR11956:SF1 1 577 8.2E-263 T 22-04-2016 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF47323 455 577 2.68E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.5E-162 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.2E-20 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 SMART SM01016 5 87 2.0E-28 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:1.10.730.10 455 577 3.4E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 SMART SM00836 461 577 7.9E-43 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF55190 2 96 3.66E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:3.40.50.620 110 454 3.8E-112 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 6.8E-200 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF52374 110 454 4.3E-94 T 22-04-2016 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 PANTHER PTHR11956 1 577 8.2E-263 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF05746 DALR anticodon binding domain 461 577 4.0E-37 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:3.30.1360.70 2 105 5.7E-34 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS04845 c18cbc177800c78aff74d8d9e46f4e0f 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.167 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 SUPERFAMILY SSF64518 5 376 3.27E-97 T 22-04-2016 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 Pfam PF07196 Flagellin hook IN motif 201 246 6.3E-11 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 PANTHER PTHR30244 2 376 1.2E-158 T 22-04-2016 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 Gene3D G3DSA:1.20.1330.10 54 171 1.1E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 Gene3D G3DSA:1.20.1330.10 279 332 1.1E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.1E-45 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 PANTHER PTHR30244:SF1 2 376 1.2E-158 T 22-04-2016 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 PRINTS PR00207 Flagellin signature 37 54 1.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 PRINTS PR00207 Flagellin signature 111 134 1.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 PRINTS PR00207 Flagellin signature 76 95 1.5E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VPUCM_RS11655 c144e7769858a522e8bb3165cce42d6f 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 9.6E-24 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 SMART SM00028 171 204 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 SMART SM00028 207 240 0.27 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 PANTHER PTHR26312:SF74 145 251 3.3E-19 T 22-04-2016 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 Pfam PF13432 Tetratricopeptide repeat 145 196 7.4E-7 T 22-04-2016 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 Pfam PF16331 TolA binding protein trimerisation 42 114 1.1E-23 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 249 3.9E-39 T 22-04-2016 IPR014162 Tol-Pal system, YbgF VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 Gene3D G3DSA:1.25.40.10 136 243 3.7E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 PANTHER PTHR26312 145 251 3.3E-19 T 22-04-2016 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 Pfam PF13174 Tetratricopeptide repeat 208 240 8.5E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS10675 8909057bd9248eca4b69b618caea9c39 251 SUPERFAMILY SSF48452 134 244 1.39E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS14355 dd60588c573f872055e506e133987b6b 505 Pfam PF13401 AAA domain 27 128 8.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS14355 dd60588c573f872055e506e133987b6b 505 Pfam PF05036 Sporulation related domain 418 491 4.6E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS14355 dd60588c573f872055e506e133987b6b 505 Gene3D G3DSA:3.40.50.300 26 154 3.6E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14355 dd60588c573f872055e506e133987b6b 505 SUPERFAMILY SSF52540 13 221 1.44E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS06705 25bddb62c860257c1477f2e205a606ab 417 PANTHER PTHR32195:SF19 1 417 8.3E-190 T 22-04-2016 VPUCM_RS06705 25bddb62c860257c1477f2e205a606ab 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 383 1.5E-17 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VPUCM_RS06705 25bddb62c860257c1477f2e205a606ab 417 PANTHER PTHR32195 1 417 8.3E-190 T 22-04-2016 VPUCM_RS10305 3130e1b23ac79fda53de8ace734b9e96 185 Gene3D G3DSA:3.40.630.30 2 156 8.8E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10305 3130e1b23ac79fda53de8ace734b9e96 185 Pfam PF13302 Acetyltransferase (GNAT) domain 9 145 2.0E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS10305 3130e1b23ac79fda53de8ace734b9e96 185 PANTHER PTHR13256 1 165 2.0E-20 T 22-04-2016 VPUCM_RS10305 3130e1b23ac79fda53de8ace734b9e96 185 SUPERFAMILY SSF55729 2 156 7.57E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS00970 3f29c7b2e42de31499a005960c2d3087 672 Pfam PF00884 Sulfatase 281 570 2.0E-23 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VPUCM_RS00970 3f29c7b2e42de31499a005960c2d3087 672 PANTHER PTHR10342:SF236 253 569 1.1E-18 T 22-04-2016 VPUCM_RS00970 3f29c7b2e42de31499a005960c2d3087 672 SUPERFAMILY SSF53649 280 601 1.22E-27 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS00970 3f29c7b2e42de31499a005960c2d3087 672 Gene3D G3DSA:3.40.720.10 281 589 7.8E-21 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS00970 3f29c7b2e42de31499a005960c2d3087 672 PANTHER PTHR10342 253 569 1.1E-18 T 22-04-2016 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 8.6E-66 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 Gene3D G3DSA:3.30.428.10 46 177 2.6E-56 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 SUPERFAMILY SSF54197 181 348 5.95E-56 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 PANTHER PTHR11943 1 349 6.2E-214 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 6.4E-186 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.3E-66 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 Gene3D G3DSA:3.30.428.10 178 349 1.5E-76 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 PIRSF PIRSF000808 2 345 1.5E-125 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 SUPERFAMILY SSF54197 6 179 1.34E-72 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VPUCM_RS04230 07f7bb542fde40a0ecb0c36a4b064a8f 350 PANTHER PTHR11943:SF2 1 349 6.2E-214 T 22-04-2016 VPUCM_RS02205 bb20b512bfc8738a10c979c0f7f2725b 121 PANTHER PTHR34039:SF1 2 121 2.6E-34 T 22-04-2016 VPUCM_RS02205 bb20b512bfc8738a10c979c0f7f2725b 121 Gene3D G3DSA:3.40.1350.10 13 118 2.1E-35 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VPUCM_RS02205 bb20b512bfc8738a10c979c0f7f2725b 121 PANTHER PTHR34039 2 121 2.6E-34 T 22-04-2016 VPUCM_RS02205 bb20b512bfc8738a10c979c0f7f2725b 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 117 23.808 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VPUCM_RS02205 bb20b512bfc8738a10c979c0f7f2725b 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 119 1.0E-34 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VPUCM_RS02205 bb20b512bfc8738a10c979c0f7f2725b 121 Pfam PF02021 Uncharacterised protein family UPF0102 13 104 2.1E-27 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VPUCM_RS02205 bb20b512bfc8738a10c979c0f7f2725b 121 SUPERFAMILY SSF52980 7 111 2.95E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 SMART SM00825 Beta-ketoacyl synthase 6 416 3.5E-16 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 Gene3D G3DSA:3.40.47.10 2 260 1.0E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.2E-64 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 8.8E-193 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 SUPERFAMILY SSF53901 3 252 7.68E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 5.9E-36 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 SUPERFAMILY SSF53901 215 414 5.76E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 PIRSF PIRSF000447 1 416 1.5E-203 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 Gene3D G3DSA:3.40.47.10 263 414 3.4E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS10555 72d960ee038a1e4aa66dd3e714ce6ba0 416 PANTHER PTHR11712 3 414 5.7E-208 T 22-04-2016 VPUCM_RS21335 d371cc0c5e980747865a5796f1930829 69 Pfam PF00403 Heavy-metal-associated domain 23 65 6.4E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS21335 d371cc0c5e980747865a5796f1930829 69 ProSitePatterns PS01047 Heavy-metal-associated domain. 23 52 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VPUCM_RS21335 d371cc0c5e980747865a5796f1930829 69 SUPERFAMILY SSF55008 16 66 2.75E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VPUCM_RS21335 d371cc0c5e980747865a5796f1930829 69 Gene3D G3DSA:3.30.70.100 15 65 1.1E-13 T 22-04-2016 VPUCM_RS07780 6ad5cab8da48cb48e7660a262be656df 228 Pfam PF03352 Methyladenine glycosylase 46 139 1.2E-14 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VPUCM_RS07780 6ad5cab8da48cb48e7660a262be656df 228 PANTHER PTHR30037:SF3 176 208 5.8E-73 T 22-04-2016 VPUCM_RS07780 6ad5cab8da48cb48e7660a262be656df 228 PANTHER PTHR30037:SF3 1 158 5.8E-73 T 22-04-2016 VPUCM_RS07780 6ad5cab8da48cb48e7660a262be656df 228 SUPERFAMILY SSF48150 39 184 6.43E-40 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VPUCM_RS07780 6ad5cab8da48cb48e7660a262be656df 228 Gene3D G3DSA:1.10.340.30 41 172 2.8E-25 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VPUCM_RS07780 6ad5cab8da48cb48e7660a262be656df 228 PANTHER PTHR30037 176 208 5.8E-73 T 22-04-2016 VPUCM_RS07780 6ad5cab8da48cb48e7660a262be656df 228 PANTHER PTHR30037 1 158 5.8E-73 T 22-04-2016 VPUCM_RS05515 65b3f3c2cfb3c23215b426db66044499 169 PANTHER PTHR40547 1 166 1.2E-50 T 22-04-2016 VPUCM_RS05515 65b3f3c2cfb3c23215b426db66044499 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 2.5E-45 T 22-04-2016 IPR018639 Domain of unknown function DUF2062 VPUCM_RS05515 65b3f3c2cfb3c23215b426db66044499 169 PANTHER PTHR40547:SF1 1 166 1.2E-50 T 22-04-2016 VPUCM_RS04585 70c5a1bffefba3033fde0d0f122953c0 147 PANTHER PTHR35146 1 147 9.9E-53 T 22-04-2016 VPUCM_RS04585 70c5a1bffefba3033fde0d0f122953c0 147 PANTHER PTHR35146:SF1 1 147 9.9E-53 T 22-04-2016 VPUCM_RS04585 70c5a1bffefba3033fde0d0f122953c0 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.4E-47 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 VPUCM_RS04585 70c5a1bffefba3033fde0d0f122953c0 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.757 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 VPUCM_RS07295 fdd8f8f73bdfbba66c0a0ec93a6ae6b4 141 Pfam PF13673 Acetyltransferase (GNAT) domain 27 137 3.6E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS07295 fdd8f8f73bdfbba66c0a0ec93a6ae6b4 141 SUPERFAMILY SSF55729 1 137 1.08E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07295 fdd8f8f73bdfbba66c0a0ec93a6ae6b4 141 Gene3D G3DSA:3.40.630.30 1 135 8.5E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07295 fdd8f8f73bdfbba66c0a0ec93a6ae6b4 141 PANTHER PTHR23091 1 137 6.2E-17 T 22-04-2016 VPUCM_RS00930 5f1cbd9f27ce90d16adbe05d14b2ec63 196 SUPERFAMILY SSF48498 81 191 3.2E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VPUCM_RS00930 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Gene3D G3DSA:1.10.357.10 5 192 1.3E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VPUCM_RS00930 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.226 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VPUCM_RS00930 5f1cbd9f27ce90d16adbe05d14b2ec63 196 SUPERFAMILY SSF46689 5 78 1.99E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS00930 5f1cbd9f27ce90d16adbe05d14b2ec63 196 PANTHER PTHR30055 6 191 3.7E-110 T 22-04-2016 VPUCM_RS00930 5f1cbd9f27ce90d16adbe05d14b2ec63 196 PANTHER PTHR30055:SF58 6 191 3.7E-110 T 22-04-2016 VPUCM_RS00930 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 4.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS03880 717eeae16f9907cc3cce8026784de422 377 PANTHER PTHR33678 3 362 1.8E-38 T 22-04-2016 VPUCM_RS03880 717eeae16f9907cc3cce8026784de422 377 Pfam PF03050 Transposase IS66 family 64 335 3.6E-56 T 22-04-2016 IPR004291 Transposase, IS66 VPUCM_RS03050 d2a6b5af356182e3f9993dde574a4dbe 395 Gene3D G3DSA:1.10.443.10 202 381 8.4E-30 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS03050 d2a6b5af356182e3f9993dde574a4dbe 395 PANTHER PTHR30629:SF2 1 395 5.4E-89 T 22-04-2016 VPUCM_RS03050 d2a6b5af356182e3f9993dde574a4dbe 395 Pfam PF13356 Domain of unknown function (DUF4102) 2 88 8.4E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 VPUCM_RS03050 d2a6b5af356182e3f9993dde574a4dbe 395 PANTHER PTHR30629 1 395 5.4E-89 T 22-04-2016 VPUCM_RS03050 d2a6b5af356182e3f9993dde574a4dbe 395 Pfam PF00589 Phage integrase family 203 373 2.0E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS03050 d2a6b5af356182e3f9993dde574a4dbe 395 SUPERFAMILY SSF56349 98 383 3.06E-60 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS03050 d2a6b5af356182e3f9993dde574a4dbe 395 Gene3D G3DSA:1.10.150.130 98 193 1.7E-20 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VPUCM_RS08550 06d6d4fe6ef1e7dfe6318f8d708ad711 487 Pfam PF00293 NUDIX domain 37 107 3.5E-10 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS08550 06d6d4fe6ef1e7dfe6318f8d708ad711 487 Gene3D G3DSA:1.20.144.10 205 359 6.6E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VPUCM_RS08550 06d6d4fe6ef1e7dfe6318f8d708ad711 487 Gene3D G3DSA:3.90.79.10 37 97 1.9E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS08550 06d6d4fe6ef1e7dfe6318f8d708ad711 487 SUPERFAMILY SSF48317 213 359 1.31E-8 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VPUCM_RS08550 06d6d4fe6ef1e7dfe6318f8d708ad711 487 SUPERFAMILY SSF55811 36 173 1.62E-18 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS08550 06d6d4fe6ef1e7dfe6318f8d708ad711 487 Pfam PF01569 PAP2 superfamily 246 358 3.6E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VPUCM_RS08550 06d6d4fe6ef1e7dfe6318f8d708ad711 487 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VPUCM_RS13370 f1571912cda4008e1108c0880595e8f2 157 SUPERFAMILY SSF55826 5 156 4.19E-38 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS13370 f1571912cda4008e1108c0880595e8f2 157 Gene3D G3DSA:3.90.960.10 5 157 4.7E-42 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS13370 f1571912cda4008e1108c0880595e8f2 157 PANTHER PTHR30411 1 157 2.2E-26 T 22-04-2016 VPUCM_RS13370 f1571912cda4008e1108c0880595e8f2 157 Pfam PF04073 Aminoacyl-tRNA editing domain 27 147 1.2E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS09490 77939d7673a97249bae35d97c304cc88 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 182 7.9E-53 T 22-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VPUCM_RS09490 77939d7673a97249bae35d97c304cc88 204 PANTHER PTHR23029 3 184 4.5E-29 T 22-04-2016 VPUCM_RS09490 77939d7673a97249bae35d97c304cc88 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 186 2.4E-39 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VPUCM_RS09490 77939d7673a97249bae35d97c304cc88 204 PANTHER PTHR23029:SF1 3 184 4.5E-29 T 22-04-2016 VPUCM_RS09490 77939d7673a97249bae35d97c304cc88 204 SUPERFAMILY SSF53254 1 189 1.28E-37 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VPUCM_RS09490 77939d7673a97249bae35d97c304cc88 204 Gene3D G3DSA:3.40.50.1240 5 186 8.6E-37 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VPUCM_RS09490 77939d7673a97249bae35d97c304cc88 204 SMART SM00855 5 154 3.7E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 SMART SM00387 353 447 1.9E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 SUPERFAMILY SSF55874 320 443 1.96E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 Pfam PF17200 Single Cache domain 2 45 192 9.2E-41 T 22-04-2016 IPR033480 Single Cache domain 2 VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 PIRSF PIRSF037314 1 454 1.8E-191 T 22-04-2016 IPR017171 Signal transduction histidine kinase, MctS VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 PANTHER PTHR24421 104 447 5.4E-73 T 22-04-2016 VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 Gene3D G3DSA:3.30.565.10 337 445 3.0E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 SMART SM01049 42 133 2.0E-31 T 22-04-2016 IPR033480 Single Cache domain 2 VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 PANTHER PTHR24421:SF1 104 447 5.4E-73 T 22-04-2016 VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 Pfam PF07730 Histidine kinase 250 315 5.0E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 1.9E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VPUCM_RS06610 fc8db57e618c0d9385fcc87d80f28240 454 Gene3D G3DSA:3.30.450.20 35 184 1.2E-48 T 22-04-2016 VPUCM_RS06045 009664a0847a99357ce27949f390dec9 430 Gene3D G3DSA:3.50.50.60 200 284 2.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS06045 009664a0847a99357ce27949f390dec9 430 Gene3D G3DSA:3.50.50.60 1 110 2.0E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS06045 009664a0847a99357ce27949f390dec9 430 PANTHER PTHR10742:SF275 1 411 7.2E-228 T 22-04-2016 VPUCM_RS06045 009664a0847a99357ce27949f390dec9 430 SUPERFAMILY SSF51905 382 413 2.01E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS06045 009664a0847a99357ce27949f390dec9 430 SUPERFAMILY SSF51905 1 299 2.01E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS06045 009664a0847a99357ce27949f390dec9 430 PANTHER PTHR10742 1 411 7.2E-228 T 22-04-2016 VPUCM_RS06045 009664a0847a99357ce27949f390dec9 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 303 3.1E-18 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 VPUCM_RS15450 fe34e575a141c30514ee20e46659e7da 194 PANTHER PTHR33508:SF4 1 193 1.3E-83 T 22-04-2016 VPUCM_RS15450 fe34e575a141c30514ee20e46659e7da 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 8.2E-30 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VPUCM_RS15450 fe34e575a141c30514ee20e46659e7da 194 PANTHER PTHR33508 1 193 1.3E-83 T 22-04-2016 VPUCM_RS15450 fe34e575a141c30514ee20e46659e7da 194 Pfam PF01914 MarC family integral membrane protein 3 192 1.8E-54 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VPUCM_RS08780 c5a5e15d13d76683cdb27e4eb4e83dc4 221 Pfam PF06578 YOP proteins translocation protein K (YscK) 10 221 3.8E-88 T 22-04-2016 IPR009510 Type III secretion system, secretion protein K GO:0009405 VPUCM_RS08780 c5a5e15d13d76683cdb27e4eb4e83dc4 221 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 14 220 1.0E-118 T 22-04-2016 IPR009510 Type III secretion system, secretion protein K GO:0009405 VPUCM_RS04265 1afa6b5f51ded8ab19c260d056dab3c4 110 PANTHER PTHR11586:SF19 1 110 3.0E-68 T 22-04-2016 VPUCM_RS04265 1afa6b5f51ded8ab19c260d056dab3c4 110 Gene3D G3DSA:2.40.50.140 2 109 4.9E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS04265 1afa6b5f51ded8ab19c260d056dab3c4 110 SUPERFAMILY SSF50249 8 109 2.69E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS04265 1afa6b5f51ded8ab19c260d056dab3c4 110 Pfam PF01588 Putative tRNA binding domain 14 107 5.5E-30 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VPUCM_RS04265 1afa6b5f51ded8ab19c260d056dab3c4 110 PANTHER PTHR11586 1 110 3.0E-68 T 22-04-2016 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 Pfam PF00005 ABC transporter 359 509 7.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 Pfam PF00664 ABC transporter transmembrane region 27 293 2.4E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 Gene3D G3DSA:1.20.1560.10 13 327 1.9E-76 T 22-04-2016 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 2.2E-242 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 PANTHER PTHR24221:SF188 6 582 0.0 T 22-04-2016 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 SMART SM00382 368 555 8.7E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 SUPERFAMILY SSF90123 14 327 4.84E-77 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 PANTHER PTHR24221 6 582 0.0 T 22-04-2016 VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 SUPERFAMILY SSF52540 331 580 3.76E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05525 097b38b5913ce95beaf07eeda13a34d9 582 Gene3D G3DSA:3.40.50.300 342 574 1.1E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08880 53435b52fb1f2d3029ff3797d5432fef 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 1.4E-61 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VPUCM_RS08880 53435b52fb1f2d3029ff3797d5432fef 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 6.5E-53 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 VPUCM_RS08880 53435b52fb1f2d3029ff3797d5432fef 238 Gene3D G3DSA:3.40.50.1360 3 237 7.2E-72 T 22-04-2016 VPUCM_RS08880 53435b52fb1f2d3029ff3797d5432fef 238 PANTHER PTHR11054 5 237 1.8E-73 T 22-04-2016 VPUCM_RS08880 53435b52fb1f2d3029ff3797d5432fef 238 SUPERFAMILY SSF100950 3 237 1.47E-60 T 22-04-2016 VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 Pfam PF05036 Sporulation related domain 190 260 4.7E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 PANTHER PTHR34183:SF1 29 244 2.7E-85 T 22-04-2016 VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 SUPERFAMILY SSF50685 88 175 2.86E-11 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 SUPERFAMILY SSF110997 189 262 2.75E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 Pfam PF03330 Lytic transglycolase 84 173 2.5E-28 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 PANTHER PTHR34183 29 244 2.7E-85 T 22-04-2016 VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 250 2.1E-47 T 22-04-2016 IPR012997 Rare lipoprotein A VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 Gene3D G3DSA:3.30.70.1070 189 261 5.0E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS12510 129d9b233eeb24ea4f3f4bee68d225d1 267 Gene3D G3DSA:2.40.40.10 123 175 1.3E-6 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 Gene3D G3DSA:3.40.190.10 183 252 8.4E-4 T 22-04-2016 VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 PANTHER PTHR30537:SF5 1 285 6.5E-65 T 22-04-2016 VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 Gene3D G3DSA:3.40.190.10 111 182 3.3E-12 T 22-04-2016 VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 SUPERFAMILY SSF46785 4 89 2.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 SUPERFAMILY SSF53850 89 286 2.48E-31 T 22-04-2016 VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 Gene3D G3DSA:1.10.10.10 4 89 1.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 Pfam PF03466 LysR substrate binding domain 89 285 7.9E-28 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS06215 1ca65d4dfa0746b68a8cf6c69e6a16ad 286 PANTHER PTHR30537 1 285 6.5E-65 T 22-04-2016 VPUCM_RS04700 21250195e5f034702612373a7974ca8a 211 Pfam PF01351 Ribonuclease HII 27 203 8.3E-39 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain VPUCM_RS04700 21250195e5f034702612373a7974ca8a 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 38.261 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 VPUCM_RS04700 21250195e5f034702612373a7974ca8a 211 SUPERFAMILY SSF53098 19 209 1.43E-71 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS04700 21250195e5f034702612373a7974ca8a 211 PANTHER PTHR10954 21 209 6.8E-84 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 VPUCM_RS04700 21250195e5f034702612373a7974ca8a 211 Gene3D G3DSA:3.30.420.10 25 166 9.1E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS05725 68bab00e954d7ac8de92f07f189ac9a0 321 PANTHER PTHR35271 1 321 1.2E-72 T 22-04-2016 VPUCM_RS05725 68bab00e954d7ac8de92f07f189ac9a0 321 Gene3D G3DSA:3.40.50.2300 27 155 4.3E-57 T 22-04-2016 VPUCM_RS05725 68bab00e954d7ac8de92f07f189ac9a0 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 2.1E-111 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein VPUCM_RS05725 68bab00e954d7ac8de92f07f189ac9a0 321 SUPERFAMILY SSF53822 43 279 3.14E-18 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS05725 68bab00e954d7ac8de92f07f189ac9a0 321 Gene3D G3DSA:3.40.50.2300 156 287 3.1E-47 T 22-04-2016 VPUCM_RS09115 3d147edd2eab0395f29625dd99f68b1a 157 SUPERFAMILY SSF53850 39 153 1.36E-5 T 22-04-2016 VPUCM_RS05455 647acf99fb187f0f629e86a40c4b84ec 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.6E-28 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 VPUCM_RS07145 a750cc680dd2d81facbb900021e5bd1a 169 PANTHER PTHR23091:SF187 3 148 1.9E-26 T 22-04-2016 VPUCM_RS07145 a750cc680dd2d81facbb900021e5bd1a 169 Gene3D G3DSA:3.40.630.30 1 163 7.7E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07145 a750cc680dd2d81facbb900021e5bd1a 169 PANTHER PTHR23091 3 148 1.9E-26 T 22-04-2016 VPUCM_RS07145 a750cc680dd2d81facbb900021e5bd1a 169 Pfam PF13420 Acetyltransferase (GNAT) domain 3 158 3.0E-22 T 22-04-2016 VPUCM_RS07145 a750cc680dd2d81facbb900021e5bd1a 169 SUPERFAMILY SSF55729 2 162 2.3E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS01055 ba46e2ab2d9c659adf80f9ac2082bc12 231 Gene3D G3DSA:3.90.550.10 6 226 5.0E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01055 ba46e2ab2d9c659adf80f9ac2082bc12 231 PANTHER PTHR21485 6 223 3.8E-56 T 22-04-2016 VPUCM_RS01055 ba46e2ab2d9c659adf80f9ac2082bc12 231 SUPERFAMILY SSF53448 5 229 2.28E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01055 ba46e2ab2d9c659adf80f9ac2082bc12 231 Pfam PF02348 Cytidylyltransferase 8 136 4.3E-29 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VPUCM_RS12980 ec7cb4c52eb96ae2c72fb16f29665d0d 556 Gene3D G3DSA:3.30.750.24 439 541 1.8E-8 T 22-04-2016 IPR002645 STAS domain VPUCM_RS12980 ec7cb4c52eb96ae2c72fb16f29665d0d 556 Pfam PF01740 STAS domain 440 533 4.7E-12 T 22-04-2016 IPR002645 STAS domain VPUCM_RS12980 ec7cb4c52eb96ae2c72fb16f29665d0d 556 PANTHER PTHR11814:SF97 10 550 2.2E-300 T 22-04-2016 VPUCM_RS12980 ec7cb4c52eb96ae2c72fb16f29665d0d 556 SUPERFAMILY SSF52091 439 541 1.37E-10 T 22-04-2016 IPR002645 STAS domain VPUCM_RS12980 ec7cb4c52eb96ae2c72fb16f29665d0d 556 PANTHER PTHR11814 10 550 2.2E-300 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VPUCM_RS12980 ec7cb4c52eb96ae2c72fb16f29665d0d 556 Pfam PF00916 Sulfate permease family 11 376 2.2E-85 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VPUCM_RS10185 704ccebd0d54e539136bc56ece1a3575 260 Pfam PF00005 ABC transporter 30 178 4.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS10185 704ccebd0d54e539136bc56ece1a3575 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS10185 704ccebd0d54e539136bc56ece1a3575 260 PANTHER PTHR24220 6 259 1.9E-116 T 22-04-2016 VPUCM_RS10185 704ccebd0d54e539136bc56ece1a3575 260 Gene3D G3DSA:3.40.50.300 2 252 2.3E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10185 704ccebd0d54e539136bc56ece1a3575 260 PANTHER PTHR24220:SF81 6 259 1.9E-116 T 22-04-2016 VPUCM_RS10185 704ccebd0d54e539136bc56ece1a3575 260 SUPERFAMILY SSF52540 3 252 1.11E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10185 704ccebd0d54e539136bc56ece1a3575 260 SMART SM00382 38 227 5.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS10510 149280e3e48ea0d019e24ec5d450a213 196 Gene3D G3DSA:2.40.160.20 32 196 8.0E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS10510 149280e3e48ea0d019e24ec5d450a213 196 SUPERFAMILY SSF56925 31 196 1.54E-19 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS10510 149280e3e48ea0d019e24ec5d450a213 196 Pfam PF13505 Outer membrane protein beta-barrel domain 14 194 9.5E-8 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VPUCM_RS12835 b430ca90142eb20b1b9d575ec3878c06 328 Gene3D G3DSA:1.10.3720.10 93 321 3.7E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12835 b430ca90142eb20b1b9d575ec3878c06 328 PANTHER PTHR30465:SF24 1 325 1.4E-112 T 22-04-2016 VPUCM_RS12835 b430ca90142eb20b1b9d575ec3878c06 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 325 1.6E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12835 b430ca90142eb20b1b9d575ec3878c06 328 SUPERFAMILY SSF161098 93 324 2.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12835 b430ca90142eb20b1b9d575ec3878c06 328 PANTHER PTHR30465 1 325 1.4E-112 T 22-04-2016 VPUCM_RS07535 5b910221ec5a4f6acfff8b3de8784182 228 PANTHER PTHR32309:SF13 12 187 1.2E-13 T 22-04-2016 VPUCM_RS07535 5b910221ec5a4f6acfff8b3de8784182 228 SUPERFAMILY SSF52540 23 198 1.09E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS07535 5b910221ec5a4f6acfff8b3de8784182 228 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 210 2.1E-9 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VPUCM_RS07535 5b910221ec5a4f6acfff8b3de8784182 228 PANTHER PTHR32309 12 187 1.2E-13 T 22-04-2016 VPUCM_RS07535 5b910221ec5a4f6acfff8b3de8784182 228 Gene3D G3DSA:3.40.50.300 24 202 4.0E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS21270 a3057cfec250bd4f006c24993a7e50c9 382 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 149 280 7.0E-10 T 22-04-2016 IPR013398 CRISPR-associated protein Csy2 VPUCM_RS11210 d3d7925cb235c99d6892ccb724b5f5f4 82 PANTHER PTHR33884 1 82 4.8E-22 T 22-04-2016 VPUCM_RS11210 d3d7925cb235c99d6892ccb724b5f5f4 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.8E-13 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 VPUCM_RS13050 b8df48dca97c125b41bcb2e154ea98b7 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.989 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VPUCM_RS13050 b8df48dca97c125b41bcb2e154ea98b7 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 184 3.3E-67 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VPUCM_RS13050 b8df48dca97c125b41bcb2e154ea98b7 204 Gene3D G3DSA:3.40.50.300 2 199 1.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13050 b8df48dca97c125b41bcb2e154ea98b7 204 SUPERFAMILY SSF52540 1 193 5.94E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13050 b8df48dca97c125b41bcb2e154ea98b7 204 Pfam PF01121 Dephospho-CoA kinase 3 179 1.5E-72 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VPUCM_RS13050 b8df48dca97c125b41bcb2e154ea98b7 204 PANTHER PTHR10695 1 195 6.1E-79 T 22-04-2016 VPUCM_RS05265 b285e59d47f31ca80d02831d724631ed 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 259 4.8E-29 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VPUCM_RS05265 b285e59d47f31ca80d02831d724631ed 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 340 1.7E-86 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VPUCM_RS05265 b285e59d47f31ca80d02831d724631ed 364 PANTHER PTHR30469:SF13 1 348 1.0E-181 T 22-04-2016 VPUCM_RS05265 b285e59d47f31ca80d02831d724631ed 364 Gene3D G3DSA:2.40.50.100 60 93 2.6E-16 T 22-04-2016 VPUCM_RS05265 b285e59d47f31ca80d02831d724631ed 364 Gene3D G3DSA:2.40.50.100 154 185 2.6E-16 T 22-04-2016 VPUCM_RS05265 b285e59d47f31ca80d02831d724631ed 364 PANTHER PTHR30469 1 348 1.0E-181 T 22-04-2016 VPUCM_RS05265 b285e59d47f31ca80d02831d724631ed 364 SUPERFAMILY SSF111369 49 264 6.54E-39 T 22-04-2016 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PANTHER PTHR30381:SF1 1 363 8.0E-219 T 22-04-2016 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 40.016 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 9.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 Pfam PF02119 Flagellar P-ring protein 22 362 8.2E-139 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VPUCM_RS12110 df04199403dbdfbbb881bbc765bcf552 363 PANTHER PTHR30381 1 363 8.0E-219 T 22-04-2016 VPUCM_RS00075 fc8d05ad8946bf0bc01d2fbddc10dd12 145 PANTHER PTHR11527:SF145 5 144 3.4E-52 T 22-04-2016 VPUCM_RS00075 fc8d05ad8946bf0bc01d2fbddc10dd12 145 SUPERFAMILY SSF49764 6 137 4.19E-23 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS00075 fc8d05ad8946bf0bc01d2fbddc10dd12 145 PANTHER PTHR11527 5 144 3.4E-52 T 22-04-2016 IPR031107 Small heat shock protein HSP20 VPUCM_RS00075 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Gene3D G3DSA:2.60.40.790 5 136 1.4E-17 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS00075 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.3E-19 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VPUCM_RS13345 1982b56baee4b213f5acf1dea129f6af 208 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 99 8.0E-35 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VPUCM_RS13345 1982b56baee4b213f5acf1dea129f6af 208 PANTHER PTHR38104 1 202 6.4E-57 T 22-04-2016 VPUCM_RS13345 1982b56baee4b213f5acf1dea129f6af 208 PIRSF PIRSF016938 1 201 1.9E-34 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 VPUCM_RS13345 1982b56baee4b213f5acf1dea129f6af 208 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 140 191 1.2E-19 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal VPUCM_RS13345 1982b56baee4b213f5acf1dea129f6af 208 SUPERFAMILY SSF89069 4 67 2.62E-21 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 PANTHER PTHR26402:SF522 5 134 5.3E-41 T 22-04-2016 VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 PANTHER PTHR26402:SF522 204 221 5.3E-41 T 22-04-2016 VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 Gene3D G3DSA:3.40.50.2300 4 129 1.1E-27 T 22-04-2016 VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 Pfam PF00072 Response regulator receiver domain 7 118 9.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 Pfam PF12431 Transcriptional regulator 134 162 3.6E-8 T 22-04-2016 IPR028141 Transcriptional regulator VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 PIRSF PIRSF006171 3 228 2.0E-79 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 SMART SM00448 5 118 6.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 SUPERFAMILY SSF52172 6 129 1.85E-31 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 PANTHER PTHR26402 5 134 5.3E-41 T 22-04-2016 VPUCM_RS08890 bdf0e0e844960a2fbd30ba9da533d6d7 228 PANTHER PTHR26402 204 221 5.3E-41 T 22-04-2016 VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.9E-22 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 Pfam PF00005 ABC transporter 26 181 8.3E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 SMART SM00382 34 231 1.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 Gene3D G3DSA:3.40.50.300 4 253 5.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 PANTHER PTHR24220 7 318 1.5E-135 T 22-04-2016 VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.1E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 PANTHER PTHR24220:SF535 7 318 1.5E-135 T 22-04-2016 VPUCM_RS12845 41cc4911190d72caf2e4873376efebe3 327 SUPERFAMILY SSF52540 5 252 1.15E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14190 588bb6d27d008765a2813d41f95380b4 373 PIRSF PIRSF000524 5 373 4.0E-111 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VPUCM_RS14190 588bb6d27d008765a2813d41f95380b4 373 Gene3D G3DSA:3.40.640.10 23 267 7.2E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS14190 588bb6d27d008765a2813d41f95380b4 373 Gene3D G3DSA:3.90.1150.10 268 372 7.2E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS14190 588bb6d27d008765a2813d41f95380b4 373 Pfam PF00266 Aminotransferase class-V 13 349 1.7E-38 T 22-04-2016 IPR000192 Aminotransferase class V domain VPUCM_RS14190 588bb6d27d008765a2813d41f95380b4 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VPUCM_RS14190 588bb6d27d008765a2813d41f95380b4 373 SUPERFAMILY SSF53383 9 371 3.31E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS14190 588bb6d27d008765a2813d41f95380b4 373 PANTHER PTHR21152 3 371 8.9E-130 T 22-04-2016 VPUCM_RS14885 2e77446d68474e830ab1e9975649be88 127 PIRSF PIRSF000180 1 127 1.7E-57 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VPUCM_RS14885 2e77446d68474e830ab1e9975649be88 127 SUPERFAMILY SSF81343 1 127 1.02E-52 T 22-04-2016 VPUCM_RS14885 2e77446d68474e830ab1e9975649be88 127 Gene3D G3DSA:1.20.1300.10 1 127 5.2E-54 T 22-04-2016 VPUCM_RS14885 2e77446d68474e830ab1e9975649be88 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.979 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VPUCM_RS14885 2e77446d68474e830ab1e9975649be88 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.7E-49 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VPUCM_RS14885 2e77446d68474e830ab1e9975649be88 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 5.0E-52 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VPUCM_RS13825 c938c2a7ee178de2e7e0fd3ba4fc066d 172 PANTHER PTHR13947:SF7 11 172 4.1E-57 T 22-04-2016 VPUCM_RS13825 c938c2a7ee178de2e7e0fd3ba4fc066d 172 Gene3D G3DSA:3.40.630.30 13 172 3.2E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS13825 c938c2a7ee178de2e7e0fd3ba4fc066d 172 Pfam PF13508 Acetyltransferase (GNAT) domain 66 150 1.8E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS13825 c938c2a7ee178de2e7e0fd3ba4fc066d 172 PANTHER PTHR13947 11 172 4.1E-57 T 22-04-2016 VPUCM_RS13825 c938c2a7ee178de2e7e0fd3ba4fc066d 172 SUPERFAMILY SSF55729 15 172 5.32E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07770 aa45045a27a234ad6ca60240439998aa 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 23 2.5E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS07770 aa45045a27a234ad6ca60240439998aa 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.4E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS07770 aa45045a27a234ad6ca60240439998aa 163 SUPERFAMILY SSF54523 7 146 7.85E-11 T 22-04-2016 VPUCM_RS07770 aa45045a27a234ad6ca60240439998aa 163 Gene3D G3DSA:3.30.700.10 7 72 9.9E-5 T 22-04-2016 VPUCM_RS07770 aa45045a27a234ad6ca60240439998aa 163 PANTHER PTHR30093:SF7 5 59 1.4E-15 T 22-04-2016 VPUCM_RS07770 aa45045a27a234ad6ca60240439998aa 163 PANTHER PTHR30093 5 59 1.4E-15 T 22-04-2016 VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 Gene3D G3DSA:1.10.10.10 2 67 1.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.7E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 SUPERFAMILY SSF46785 1 68 7.94E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 Gene3D G3DSA:3.90.1150.10 344 462 9.2E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 Pfam PF00155 Aminotransferase class I and II 143 458 1.2E-38 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 Gene3D G3DSA:3.40.640.10 142 343 1.9E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 SMART SM00345 7 66 5.3E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 PANTHER PTHR11751 82 461 5.6E-153 T 22-04-2016 VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 SUPERFAMILY SSF53383 91 462 8.87E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS06665 4ae93d4cc3fd1b4e73ff1a73f043e270 463 PANTHER PTHR11751:SF314 82 461 5.6E-153 T 22-04-2016 VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 6.3E-23 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.14 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.646 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 Gene3D G3DSA:2.160.10.10 100 139 4.2E-12 T 22-04-2016 VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 Gene3D G3DSA:2.160.10.10 140 301 2.7E-39 T 22-04-2016 VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.5E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.8E-9 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 SUPERFAMILY SSF51161 32 316 3.5E-84 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.2E-115 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VPUCM_RS04680 ee375862b82e97470f83f951f5cf0d7d 343 PANTHER PTHR22572 79 295 7.1E-55 T 22-04-2016 VPUCM_RS06690 1fc92dd282e6def00239e5541e96e2e8 155 Gene3D G3DSA:3.40.630.30 1 151 4.5E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06690 1fc92dd282e6def00239e5541e96e2e8 155 Pfam PF00583 Acetyltransferase (GNAT) family 62 134 1.2E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS06690 1fc92dd282e6def00239e5541e96e2e8 155 SUPERFAMILY SSF55729 1 151 2.52E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS04970 0a1a0b4ef9afe41cae30aa5c919f471f 780 Pfam PF03176 MMPL family 73 413 1.9E-11 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 VPUCM_RS04970 0a1a0b4ef9afe41cae30aa5c919f471f 780 SUPERFAMILY SSF82866 617 771 6.8E-21 T 22-04-2016 VPUCM_RS04970 0a1a0b4ef9afe41cae30aa5c919f471f 780 Gene3D G3DSA:1.20.1640.10 240 408 6.7E-17 T 22-04-2016 VPUCM_RS04970 0a1a0b4ef9afe41cae30aa5c919f471f 780 Gene3D G3DSA:1.20.1640.10 619 769 8.6E-11 T 22-04-2016 VPUCM_RS04970 0a1a0b4ef9afe41cae30aa5c919f471f 780 SUPERFAMILY SSF82866 228 408 4.05E-21 T 22-04-2016 VPUCM_RS03675 1e68eebcedf659a5b0e06418cbfd56f4 211 Pfam PF14348 Domain of unknown function (DUF4400) 33 209 2.2E-25 T 22-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type VPUCM_RS05730 a66078d176b6ded2eac4777844d6523e 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 1.2E-25 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VPUCM_RS05730 a66078d176b6ded2eac4777844d6523e 311 PANTHER PTHR32196 1 304 9.2E-140 T 22-04-2016 VPUCM_RS05730 a66078d176b6ded2eac4777844d6523e 311 PANTHER PTHR32196:SF27 1 304 9.2E-140 T 22-04-2016 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 6.0E-32 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 3.4E-132 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 Gene3D G3DSA:1.10.8.60 167 242 7.5E-31 T 22-04-2016 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.1E-43 T 22-04-2016 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 PANTHER PTHR11669:SF0 1 439 2.0E-178 T 22-04-2016 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 SUPERFAMILY SSF52540 32 222 3.97E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 572 710 5.1E-50 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 494 570 7.1E-23 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 SMART SM00382 37 179 3.1E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 PANTHER PTHR11669 1 439 2.0E-178 T 22-04-2016 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 Gene3D G3DSA:1.20.272.10 243 360 1.9E-44 T 22-04-2016 VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 Gene3D G3DSA:3.40.50.300 15 166 1.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11255 41b9dffce4f94f04717dd5f91899eb54 713 SUPERFAMILY SSF48019 243 360 2.55E-32 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VPUCM_RS15415 961638fee02b3016af48334c87e46ba4 106 Gene3D G3DSA:3.40.250.10 2 104 2.4E-29 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS15415 961638fee02b3016af48334c87e46ba4 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.203 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 VPUCM_RS15415 961638fee02b3016af48334c87e46ba4 106 PANTHER PTHR12231 23 105 2.4E-14 T 22-04-2016 VPUCM_RS15415 961638fee02b3016af48334c87e46ba4 106 SUPERFAMILY SSF52821 1 105 2.36E-29 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS15415 961638fee02b3016af48334c87e46ba4 106 SMART SM00450 7 102 9.6E-19 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS15415 961638fee02b3016af48334c87e46ba4 106 Pfam PF00581 Rhodanese-like domain 13 98 9.5E-12 T 22-04-2016 IPR001763 Rhodanese-like domain VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 7.3E-118 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 143 2.8E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 Gene3D G3DSA:3.60.21.10 167 265 5.3E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 Gene3D G3DSA:3.60.21.10 3 130 5.3E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 SUPERFAMILY SSF56300 3 252 2.28E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 PANTHER PTHR24032 2 264 3.5E-139 T 22-04-2016 VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 PIRSF PIRSF000903 1 268 1.4E-121 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 46.832 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VPUCM_RS01790 624b0007dcc448b1d7971d744ef53f04 268 PANTHER PTHR24032:SF27 2 264 3.5E-139 T 22-04-2016 VPUCM_RS14005 dbd9f4d2eba7d03dc515d048736cd245 447 SUPERFAMILY SSF111283 12 447 1.96E-129 T 22-04-2016 VPUCM_RS14005 dbd9f4d2eba7d03dc515d048736cd245 447 PANTHER PTHR30624 2 447 3.2E-185 T 22-04-2016 VPUCM_RS14005 dbd9f4d2eba7d03dc515d048736cd245 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 3.9E-55 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS14005 dbd9f4d2eba7d03dc515d048736cd245 447 PANTHER PTHR30624:SF1 2 447 3.2E-185 T 22-04-2016 VPUCM_RS09125 55244164acb0391dc87a6895c5d5d455 208 Pfam PF12464 Maltose acetyltransferase 11 57 8.7E-12 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VPUCM_RS09125 55244164acb0391dc87a6895c5d5d455 208 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VPUCM_RS09125 55244164acb0391dc87a6895c5d5d455 208 SMART SM01266 4 58 1.6E-13 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VPUCM_RS09125 55244164acb0391dc87a6895c5d5d455 208 PANTHER PTHR23416:SF58 1 192 8.9E-66 T 22-04-2016 VPUCM_RS09125 55244164acb0391dc87a6895c5d5d455 208 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.2E-13 T 22-04-2016 IPR001451 Hexapeptide repeat VPUCM_RS09125 55244164acb0391dc87a6895c5d5d455 208 Gene3D G3DSA:2.160.10.10 4 187 2.0E-56 T 22-04-2016 VPUCM_RS09125 55244164acb0391dc87a6895c5d5d455 208 PANTHER PTHR23416 1 192 8.9E-66 T 22-04-2016 VPUCM_RS09125 55244164acb0391dc87a6895c5d5d455 208 SUPERFAMILY SSF51161 5 195 5.96E-52 T 22-04-2016 IPR011004 Trimeric LpxA-like VPUCM_RS05305 dae338a088ca89501ac63f4ffa180102 286 SUPERFAMILY SSF54637 6 114 5.6E-40 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS05305 dae338a088ca89501ac63f4ffa180102 286 Gene3D G3DSA:3.10.129.10 125 285 1.3E-58 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS05305 dae338a088ca89501ac63f4ffa180102 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 4.6E-95 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VPUCM_RS05305 dae338a088ca89501ac63f4ffa180102 286 PANTHER PTHR11066 5 286 4.3E-117 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VPUCM_RS05305 dae338a088ca89501ac63f4ffa180102 286 PANTHER PTHR11066:SF34 5 286 4.3E-117 T 22-04-2016 VPUCM_RS05305 dae338a088ca89501ac63f4ffa180102 286 Gene3D G3DSA:3.10.129.10 4 115 4.3E-47 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS05305 dae338a088ca89501ac63f4ffa180102 286 Pfam PF13622 Thioesterase-like superfamily 33 282 8.2E-61 T 22-04-2016 VPUCM_RS05305 dae338a088ca89501ac63f4ffa180102 286 SUPERFAMILY SSF54637 116 283 5.93E-59 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 435 4.4E-103 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 PANTHER PTHR30023 24 462 1.5E-100 T 22-04-2016 VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 Gene3D G3DSA:3.40.710.10 215 446 1.4E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 SUPERFAMILY SSF56601 52 456 2.56E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 449 3.1E-101 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 8.9E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 8.9E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 8.9E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 274 296 8.9E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 347 8.9E-30 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VPUCM_RS03350 4348cdb61897a8e16ab45f6f2e9c4d20 473 PANTHER PTHR30023:SF0 24 462 1.5E-100 T 22-04-2016 VPUCM_RS00865 d8ecff4980ce3deee4ed7169b175ca72 285 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 275 3.7E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VPUCM_RS00865 d8ecff4980ce3deee4ed7169b175ca72 285 PANTHER PTHR24220:SF535 8 283 3.5E-129 T 22-04-2016 VPUCM_RS00865 d8ecff4980ce3deee4ed7169b175ca72 285 SUPERFAMILY SSF52540 6 257 1.81E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00865 d8ecff4980ce3deee4ed7169b175ca72 285 Gene3D G3DSA:3.40.50.300 5 259 2.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00865 d8ecff4980ce3deee4ed7169b175ca72 285 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS00865 d8ecff4980ce3deee4ed7169b175ca72 285 SMART SM00382 35 244 3.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS00865 d8ecff4980ce3deee4ed7169b175ca72 285 PANTHER PTHR24220 8 283 3.5E-129 T 22-04-2016 VPUCM_RS00865 d8ecff4980ce3deee4ed7169b175ca72 285 Pfam PF00005 ABC transporter 26 186 1.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS02865 2d167a66e02ff636344f0c8ff3f3e050 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 2.4E-115 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 VPUCM_RS02865 2d167a66e02ff636344f0c8ff3f3e050 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 227 1.5E-112 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related VPUCM_RS02865 2d167a66e02ff636344f0c8ff3f3e050 258 Gene3D G3DSA:3.40.50.300 3 241 1.1E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02865 2d167a66e02ff636344f0c8ff3f3e050 258 PANTHER PTHR34383:SF1 3 258 1.9E-178 T 22-04-2016 VPUCM_RS02865 2d167a66e02ff636344f0c8ff3f3e050 258 PIRSF PIRSF028756 1 258 3.7E-132 T 22-04-2016 IPR016898 Polyphosphate kinase 2 VPUCM_RS02865 2d167a66e02ff636344f0c8ff3f3e050 258 SUPERFAMILY SSF52540 35 223 8.04E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02865 2d167a66e02ff636344f0c8ff3f3e050 258 PANTHER PTHR34383 3 258 1.9E-178 T 22-04-2016 VPUCM_RS01670 29c4e5daccf5323d335979fae05f510c 570 Gene3D G3DSA:2.40.160.50 419 567 1.1E-21 T 22-04-2016 VPUCM_RS01670 29c4e5daccf5323d335979fae05f510c 570 Gene3D G3DSA:2.40.160.50 294 367 1.1E-21 T 22-04-2016 VPUCM_RS01670 29c4e5daccf5323d335979fae05f510c 570 Pfam PF07244 Surface antigen variable number repeat 102 179 3.7E-6 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VPUCM_RS01670 29c4e5daccf5323d335979fae05f510c 570 Pfam PF01103 Surface antigen 274 567 2.4E-28 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VPUCM_RS01670 29c4e5daccf5323d335979fae05f510c 570 PANTHER PTHR12815 9 570 1.0E-209 T 22-04-2016 VPUCM_RS01670 29c4e5daccf5323d335979fae05f510c 570 PANTHER PTHR12815:SF12 9 570 1.0E-209 T 22-04-2016 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 PANTHER PTHR11609:SF1 39 367 2.8E-72 T 22-04-2016 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 SUPERFAMILY SSF56104 14 344 6.54E-68 T 22-04-2016 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 Gene3D G3DSA:3.30.200.20 13 135 1.0E-33 T 22-04-2016 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 1.2E-215 T 22-04-2016 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 PANTHER PTHR11609 39 367 2.8E-72 T 22-04-2016 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.731 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 Gene3D G3DSA:3.30.470.20 136 282 3.6E-42 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS09710 d7522fa2ecc9d6ae0aef3a0020d3610e 367 Pfam PF01259 SAICAR synthetase 22 294 4.9E-50 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 VPUCM_RS02230 bb8c74ab1a11c9a00054ec8fcf4e9b4c 597 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 245 3.1E-20 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VPUCM_RS02230 bb8c74ab1a11c9a00054ec8fcf4e9b4c 597 PANTHER PTHR30627:SF1 32 597 7.0E-219 T 22-04-2016 VPUCM_RS02230 bb8c74ab1a11c9a00054ec8fcf4e9b4c 597 SUPERFAMILY SSF56519 86 258 5.23E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VPUCM_RS02230 bb8c74ab1a11c9a00054ec8fcf4e9b4c 597 SUPERFAMILY SSF56601 260 591 1.99E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS02230 bb8c74ab1a11c9a00054ec8fcf4e9b4c 597 Gene3D G3DSA:3.90.1310.10 166 265 3.6E-33 T 22-04-2016 VPUCM_RS02230 bb8c74ab1a11c9a00054ec8fcf4e9b4c 597 Gene3D G3DSA:3.40.710.10 266 586 2.2E-88 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS02230 bb8c74ab1a11c9a00054ec8fcf4e9b4c 597 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 580 2.1E-74 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VPUCM_RS02230 bb8c74ab1a11c9a00054ec8fcf4e9b4c 597 PANTHER PTHR30627 32 597 7.0E-219 T 22-04-2016 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.512 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 Gene3D G3DSA:3.40.640.10 71 316 8.1E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 SUPERFAMILY SSF53383 2 423 6.55E-135 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 8.6E-195 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 Gene3D G3DSA:3.90.1150.10 319 424 4.1E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 Gene3D G3DSA:3.90.1150.10 2 69 4.1E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 Pfam PF00202 Aminotransferase class-III 33 397 3.0E-76 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 PANTHER PTHR11986:SF5 1 431 1.7E-237 T 22-04-2016 VPUCM_RS12810 d329472de57f74eb0d37ce80bc5f6ad9 431 PANTHER PTHR11986 1 431 1.7E-237 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VPUCM_RS11430 7f2f5b5521f4170bf6e95312f32fd101 405 PANTHER PTHR30009 93 288 5.2E-22 T 22-04-2016 VPUCM_RS11430 7f2f5b5521f4170bf6e95312f32fd101 405 PANTHER PTHR30009:SF10 93 288 5.2E-22 T 22-04-2016 VPUCM_RS11430 7f2f5b5521f4170bf6e95312f32fd101 405 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 1.2E-31 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI VPUCM_RS11430 7f2f5b5521f4170bf6e95312f32fd101 405 SUPERFAMILY SSF48452 161 265 1.3E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11430 7f2f5b5521f4170bf6e95312f32fd101 405 Gene3D G3DSA:1.25.40.10 204 287 3.0E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS11430 7f2f5b5521f4170bf6e95312f32fd101 405 Pfam PF14559 Tetratricopeptide repeat 176 244 4.8E-8 T 22-04-2016 VPUCM_RS11430 7f2f5b5521f4170bf6e95312f32fd101 405 Gene3D G3DSA:1.25.40.10 159 203 1.8E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 SUPERFAMILY SSF102114 5 310 5.1E-90 T 22-04-2016 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.788 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 SMART SM00729 43 255 1.8E-40 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 5.3E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 Gene3D G3DSA:3.20.20.70 5 311 7.2E-103 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 PANTHER PTHR22976 4 346 3.3E-178 T 22-04-2016 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 SMART SM00876 220 312 6.0E-46 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 PANTHER PTHR22976:SF1 4 346 3.3E-178 T 22-04-2016 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 3.4E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 PIRSF PIRSF001619 1 319 3.9E-138 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VPUCM_RS06010 770df422c9b1a68f595bf405a9d24f79 346 Pfam PF04055 Radical SAM superfamily 50 199 1.4E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VPUCM_RS05150 0e645258babc7ee1bfca482e85c9400d 97 PANTHER PTHR21180 33 95 1.4E-23 T 22-04-2016 VPUCM_RS05150 0e645258babc7ee1bfca482e85c9400d 97 Pfam PF12836 Helix-hairpin-helix motif 35 95 1.1E-22 T 22-04-2016 VPUCM_RS05150 0e645258babc7ee1bfca482e85c9400d 97 SMART SM00278 75 94 69.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS05150 0e645258babc7ee1bfca482e85c9400d 97 SMART SM00278 45 64 5.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VPUCM_RS05150 0e645258babc7ee1bfca482e85c9400d 97 Gene3D G3DSA:1.10.150.280 24 97 1.2E-20 T 22-04-2016 VPUCM_RS05150 0e645258babc7ee1bfca482e85c9400d 97 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 35 97 2.1E-26 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VPUCM_RS05150 0e645258babc7ee1bfca482e85c9400d 97 SUPERFAMILY SSF47781 30 97 8.0E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.1E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.1E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 Pfam PF01197 Ribosomal protein L31 1 66 3.4E-32 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 PANTHER PTHR33280:SF2 1 66 6.0E-37 T 22-04-2016 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 SUPERFAMILY SSF143800 1 68 2.63E-27 T 22-04-2016 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 PANTHER PTHR33280 1 66 6.0E-37 T 22-04-2016 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.484 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.1E-35 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS01420 4173539f4513e37e52a3ecd2869efe15 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13785 bd429e1301121a15ebe4a4938cdeff63 422 Pfam PF10011 Predicted membrane protein (DUF2254) 15 369 9.2E-99 T 22-04-2016 IPR018723 Protein of unknown function DUF2254, membrane VPUCM_RS01335 ade4c064f6705739ac8a297108ee92df 577 SUPERFAMILY SSF53448 280 436 1.69E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01335 ade4c064f6705739ac8a297108ee92df 577 SUPERFAMILY SSF53448 476 544 1.69E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01335 ade4c064f6705739ac8a297108ee92df 577 Pfam PF00535 Glycosyl transferase family 2 312 494 3.3E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS01335 ade4c064f6705739ac8a297108ee92df 577 Gene3D G3DSA:3.90.550.10 309 570 7.1E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS01335 ade4c064f6705739ac8a297108ee92df 577 PANTHER PTHR22916 309 454 2.6E-20 T 22-04-2016 VPUCM_RS01335 ade4c064f6705739ac8a297108ee92df 577 PANTHER PTHR22916 473 534 2.6E-20 T 22-04-2016 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 Pfam PF01433 Peptidase family M1 51 383 1.5E-67 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 Pfam PF11940 Domain of unknown function (DUF3458) 457 824 1.4E-133 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 SUPERFAMILY SSF63737 2 192 1.31E-46 T 22-04-2016 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 Gene3D G3DSA:1.10.390.10 307 450 9.0E-32 T 22-04-2016 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 Gene3D G3DSA:1.25.50.10 545 866 3.2E-120 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 SUPERFAMILY SSF55486 202 449 1.74E-74 T 22-04-2016 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PANTHER PTHR11533:SF152 10 584 0.0 T 22-04-2016 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PANTHER PTHR11533:SF152 608 868 0.0 T 22-04-2016 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PANTHER PTHR11533 10 584 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VPUCM_RS08365 16f8761d6cf4ecb633493c71ad361336 868 PANTHER PTHR11533 608 868 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 Gene3D G3DSA:3.30.230.10 305 505 7.7E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 399 503 1.2E-10 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 PANTHER PTHR10046 31 510 8.5E-132 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 PANTHER PTHR10046:SF49 31 510 8.5E-132 T 22-04-2016 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 313 329 8.1E-11 T 22-04-2016 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 396 415 8.1E-11 T 22-04-2016 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 426 445 8.1E-11 T 22-04-2016 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 456 474 8.1E-11 T 22-04-2016 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 Pfam PF13654 AAA domain 105 287 7.8E-27 T 22-04-2016 VPUCM_RS08315 66b9e8765c741f4eee45aa2c1d0d5da4 545 SUPERFAMILY SSF54211 313 505 4.93E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS11015 dbe4f2fe607ec126093c7b024c4022bf 209 Gene3D G3DSA:3.40.30.10 162 181 9.8E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11015 dbe4f2fe607ec126093c7b024c4022bf 209 Gene3D G3DSA:3.40.30.10 9 53 9.8E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11015 dbe4f2fe607ec126093c7b024c4022bf 209 Gene3D G3DSA:1.10.472.60 54 161 2.2E-35 T 22-04-2016 IPR023169 UPF0413, central domain VPUCM_RS11015 dbe4f2fe607ec126093c7b024c4022bf 209 Pfam PF13743 Thioredoxin 6 175 1.6E-22 T 22-04-2016 VPUCM_RS11015 dbe4f2fe607ec126093c7b024c4022bf 209 SUPERFAMILY SSF52833 1 184 3.21E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS12840 37aaf7fda8e4cb8bdcca023778366716 341 SUPERFAMILY SSF161098 96 288 4.97E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12840 37aaf7fda8e4cb8bdcca023778366716 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 304 1.0E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS12840 37aaf7fda8e4cb8bdcca023778366716 341 PANTHER PTHR30465 1 308 4.0E-97 T 22-04-2016 VPUCM_RS12840 37aaf7fda8e4cb8bdcca023778366716 341 PANTHER PTHR30465:SF2 1 308 4.0E-97 T 22-04-2016 VPUCM_RS12840 37aaf7fda8e4cb8bdcca023778366716 341 Gene3D G3DSA:1.10.3720.10 93 296 1.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05665 4b4bbb9eece386f5cbd54eca07e08cc4 151 SUPERFAMILY SSF54690 4 149 1.18E-55 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS05665 4b4bbb9eece386f5cbd54eca07e08cc4 151 Gene3D G3DSA:3.90.1170.40 3 149 3.6E-58 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS05665 4b4bbb9eece386f5cbd54eca07e08cc4 151 PANTHER PTHR23404 4 151 2.3E-44 T 22-04-2016 VPUCM_RS05665 4b4bbb9eece386f5cbd54eca07e08cc4 151 Pfam PF02391 MoaE protein 8 120 2.3E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS05665 4b4bbb9eece386f5cbd54eca07e08cc4 151 PANTHER PTHR23404:SF2 4 151 2.3E-44 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VPUCM_RS10005 5700231eefeff77807a59b9d5a195455 82 PANTHER PTHR35175:SF1 1 78 1.6E-40 T 22-04-2016 VPUCM_RS10005 5700231eefeff77807a59b9d5a195455 82 PANTHER PTHR35175 1 78 1.6E-40 T 22-04-2016 VPUCM_RS10005 5700231eefeff77807a59b9d5a195455 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 7.0E-18 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PANTHER PTHR30009:SF0 1 418 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PANTHER PTHR30009:SF0 470 657 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.5E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.8E-257 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 Pfam PF01578 Cytochrome C assembly protein 89 297 4.0E-54 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PANTHER PTHR30009 1 418 0.0 T 22-04-2016 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PANTHER PTHR30009 470 657 0.0 T 22-04-2016 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 7.6E-127 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11445 1ba63354d92c6a28c07b1f9731e7ed3d 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 Gene3D G3DSA:1.10.287.880 40 71 8.7E-4 T 22-04-2016 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 18.068 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 PANTHER PTHR33162:SF4 2 121 9.1E-47 T 22-04-2016 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.6E-27 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.6E-27 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 6.6E-27 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 Pfam PF02416 mttA/Hcf106 family 4 49 1.6E-5 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.7E-32 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VPUCM_RS00515 0ead13c11e7dec5525a7fd55d75083e9 132 PANTHER PTHR33162 2 121 9.1E-47 T 22-04-2016 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 SUPERFAMILY SSF56672 385 780 1.84E-117 T 22-04-2016 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.8E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.8E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.8E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 Gene3D G3DSA:3.90.1600.10 401 431 1.6E-10 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 Gene3D G3DSA:3.90.1600.10 515 639 1.6E-10 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 77 296 1.9E-19 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 Gene3D G3DSA:3.30.420.10 153 366 2.7E-41 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 SMART SM00486 153 558 1.5E-67 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 SUPERFAMILY SSF53098 4 389 3.9E-86 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 Pfam PF00136 DNA polymerase family B 377 742 8.3E-42 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS06400 15af1cab1b9e273a08498786b6699f04 787 PANTHER PTHR10322 105 787 1.5E-176 T 22-04-2016 VPUCM_RS01225 14d3ba18bf4de236a74e7d3d9e772de4 463 Pfam PF02706 Chain length determinant protein 110 255 2.5E-8 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VPUCM_RS12125 5f27cc8ff5d4b303c4ecc8130aa97ed6 249 PANTHER PTHR30435 1 249 3.8E-104 T 22-04-2016 VPUCM_RS12125 5f27cc8ff5d4b303c4ecc8130aa97ed6 249 Pfam PF00460 Flagella basal body rod protein 8 35 1.9E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VPUCM_RS12125 5f27cc8ff5d4b303c4ecc8130aa97ed6 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 6.4E-33 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VPUCM_RS12125 5f27cc8ff5d4b303c4ecc8130aa97ed6 249 PANTHER PTHR30435:SF18 1 249 3.8E-104 T 22-04-2016 VPUCM_RS12125 5f27cc8ff5d4b303c4ecc8130aa97ed6 249 SUPERFAMILY SSF117143 77 207 1.44E-15 T 22-04-2016 VPUCM_RS12125 5f27cc8ff5d4b303c4ecc8130aa97ed6 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 6.5E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VPUCM_RS05870 23be49606f50ee42d68c65012c653316 431 PANTHER PTHR40396 1 430 3.2E-98 T 22-04-2016 VPUCM_RS05870 23be49606f50ee42d68c65012c653316 431 Gene3D G3DSA:3.40.50.300 258 404 7.7E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05870 23be49606f50ee42d68c65012c653316 431 Gene3D G3DSA:3.40.50.300 1 140 7.7E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05870 23be49606f50ee42d68c65012c653316 431 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 383 6.1E-18 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VPUCM_RS05870 23be49606f50ee42d68c65012c653316 431 SUPERFAMILY SSF52540 1 117 2.77E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05870 23be49606f50ee42d68c65012c653316 431 SUPERFAMILY SSF52540 295 406 2.77E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05675 b35e8e61415bef43f4a31cf0e4c5589f 306 SUPERFAMILY SSF161098 88 291 1.53E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05675 b35e8e61415bef43f4a31cf0e4c5589f 306 Gene3D G3DSA:1.10.3720.10 88 301 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05675 b35e8e61415bef43f4a31cf0e4c5589f 306 PANTHER PTHR30465:SF74 1 306 5.9E-151 T 22-04-2016 VPUCM_RS05675 b35e8e61415bef43f4a31cf0e4c5589f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.8E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS05675 b35e8e61415bef43f4a31cf0e4c5589f 306 PANTHER PTHR30465 1 306 5.9E-151 T 22-04-2016 VPUCM_RS01175 59aabb442eed8213e235a82c4db03335 378 Pfam PF12693 GspL periplasmic domain 224 286 2.3E-5 T 22-04-2016 IPR025691 GspL periplasmic domain VPUCM_RS12240 c00145e559ec79098920d9b016f20d1b 290 PANTHER PTHR40590 1 290 1.6E-66 T 22-04-2016 VPUCM_RS12240 c00145e559ec79098920d9b016f20d1b 290 Pfam PF01963 TraB family 26 278 2.1E-53 T 22-04-2016 IPR002816 Pheromone shutdown, TraB VPUCM_RS08500 e955bed3ae232c1d28c6a37e5abe4478 438 PANTHER PTHR30026:SF4 14 438 3.4E-97 T 22-04-2016 VPUCM_RS08500 e955bed3ae232c1d28c6a37e5abe4478 438 PANTHER PTHR30026 14 438 3.4E-97 T 22-04-2016 VPUCM_RS08500 e955bed3ae232c1d28c6a37e5abe4478 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 430 4.6E-116 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VPUCM_RS08500 e955bed3ae232c1d28c6a37e5abe4478 438 Gene3D G3DSA:1.20.1600.10 23 421 8.5E-68 T 22-04-2016 VPUCM_RS08500 e955bed3ae232c1d28c6a37e5abe4478 438 SUPERFAMILY SSF56954 3 421 1.09E-88 T 22-04-2016 VPUCM_RS08500 e955bed3ae232c1d28c6a37e5abe4478 438 Pfam PF02321 Outer membrane efflux protein 25 213 5.6E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS08500 e955bed3ae232c1d28c6a37e5abe4478 438 Pfam PF02321 Outer membrane efflux protein 235 418 5.9E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VPUCM_RS07055 8915367b030451085a4e679739a81811 123 Gene3D G3DSA:3.30.1330.40 3 123 5.9E-27 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VPUCM_RS07055 8915367b030451085a4e679739a81811 123 PANTHER PTHR11803 1 123 1.6E-18 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VPUCM_RS07055 8915367b030451085a4e679739a81811 123 Pfam PF01042 Endoribonuclease L-PSP 11 122 3.3E-19 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VPUCM_RS07055 8915367b030451085a4e679739a81811 123 SUPERFAMILY SSF55298 3 123 1.07E-24 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VPUCM_RS11295 c76473e77b7b0c470a0d7a2950ae84c6 163 PANTHER PTHR36926 1 163 5.3E-80 T 22-04-2016 VPUCM_RS11295 c76473e77b7b0c470a0d7a2950ae84c6 163 PANTHER PTHR36926:SF1 1 163 5.3E-80 T 22-04-2016 VPUCM_RS11295 c76473e77b7b0c470a0d7a2950ae84c6 163 Pfam PF02674 Colicin V production protein 4 142 8.2E-36 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VPUCM_RS10090 44a954373dfe9db662340fd6acdbb234 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10090 44a954373dfe9db662340fd6acdbb234 230 PANTHER PTHR11079 3 218 1.4E-114 T 22-04-2016 VPUCM_RS10090 44a954373dfe9db662340fd6acdbb234 230 SUPERFAMILY SSF55120 2 198 1.57E-47 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10090 44a954373dfe9db662340fd6acdbb234 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 8.7E-109 T 22-04-2016 IPR006508 Pseudouridine synthase, RluA-like KEGG: 00627+5.4.99.- VPUCM_RS10090 44a954373dfe9db662340fd6acdbb234 230 PANTHER PTHR11079:SF62 3 218 1.4E-114 T 22-04-2016 VPUCM_RS10090 44a954373dfe9db662340fd6acdbb234 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 1.2E-26 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS10805 3f50b12f4875a4c99f58fd60a3264586 261 PANTHER PTHR30336:SF1 1 254 1.5E-74 T 22-04-2016 VPUCM_RS10805 3f50b12f4875a4c99f58fd60a3264586 261 PANTHER PTHR30336 1 254 1.5E-74 T 22-04-2016 VPUCM_RS10805 3f50b12f4875a4c99f58fd60a3264586 261 Gene3D G3DSA:3.40.50.620 79 210 2.8E-16 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS10805 3f50b12f4875a4c99f58fd60a3264586 261 Pfam PF02698 DUF218 domain 80 242 2.1E-28 T 22-04-2016 IPR003848 Domain of unknown function DUF218 VPUCM_RS07550 b867bb863be71332b793d6659f213083 106 SUPERFAMILY SSF52091 6 101 7.46E-20 T 22-04-2016 IPR002645 STAS domain VPUCM_RS07550 b867bb863be71332b793d6659f213083 106 Pfam PF13466 STAS domain 17 95 1.4E-9 T 22-04-2016 IPR002645 STAS domain VPUCM_RS07550 b867bb863be71332b793d6659f213083 106 Gene3D G3DSA:3.30.750.24 6 102 5.8E-21 T 22-04-2016 IPR002645 STAS domain VPUCM_RS02815 7d8ee5aca51b975e51f21c64ffaf7c0d 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 1.5E-126 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VPUCM_RS02815 7d8ee5aca51b975e51f21c64ffaf7c0d 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.057 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VPUCM_RS02815 7d8ee5aca51b975e51f21c64ffaf7c0d 304 PANTHER PTHR38103:SF1 2 304 4.0E-161 T 22-04-2016 VPUCM_RS02815 7d8ee5aca51b975e51f21c64ffaf7c0d 304 PANTHER PTHR38103 2 304 4.0E-161 T 22-04-2016 VPUCM_RS13080 19aaa7b972ebbb60be8854dfb6662233 82 Pfam PF00886 Ribosomal protein S16 8 68 5.6E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13080 19aaa7b972ebbb60be8854dfb6662233 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain VPUCM_RS13080 19aaa7b972ebbb60be8854dfb6662233 82 Gene3D G3DSA:3.30.1320.10 1 79 9.5E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain VPUCM_RS13080 19aaa7b972ebbb60be8854dfb6662233 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13080 19aaa7b972ebbb60be8854dfb6662233 82 PANTHER PTHR12919 1 78 2.1E-38 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13080 19aaa7b972ebbb60be8854dfb6662233 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.03 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13080 19aaa7b972ebbb60be8854dfb6662233 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.8E-27 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS22070 6144f3995439950b369e1b2fe43a813d 133 PANTHER PTHR10742:SF275 1 130 6.0E-64 T 22-04-2016 VPUCM_RS22070 6144f3995439950b369e1b2fe43a813d 133 SUPERFAMILY SSF51905 8 132 2.59E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS22070 6144f3995439950b369e1b2fe43a813d 133 PANTHER PTHR10742 1 130 6.0E-64 T 22-04-2016 VPUCM_RS22070 6144f3995439950b369e1b2fe43a813d 133 Gene3D G3DSA:3.50.50.60 79 131 2.1E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS10440 ec4afc3122cd5fb9f7e7b07a13a04ac2 97 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.821 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VPUCM_RS10440 ec4afc3122cd5fb9f7e7b07a13a04ac2 97 Pfam PF06305 Protein of unknown function (DUF1049) 22 81 1.0E-17 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VPUCM_RS00565 f5dd7663e7c8f8115804d5d423106e18 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 8.3E-46 T 22-04-2016 IPR007336 Der GTPase activator VPUCM_RS00565 f5dd7663e7c8f8115804d5d423106e18 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.918 T 22-04-2016 IPR007336 Der GTPase activator VPUCM_RS14815 46609d35b69e038d62b3e82f42ad0e3a 295 SUPERFAMILY SSF103481 202 293 9.68E-11 T 22-04-2016 VPUCM_RS14815 46609d35b69e038d62b3e82f42ad0e3a 295 Pfam PF00892 EamA-like transporter family 156 294 3.7E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS14815 46609d35b69e038d62b3e82f42ad0e3a 295 Pfam PF00892 EamA-like transporter family 4 135 7.1E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VPUCM_RS14815 46609d35b69e038d62b3e82f42ad0e3a 295 PANTHER PTHR22911 1 294 1.7E-89 T 22-04-2016 VPUCM_RS14815 46609d35b69e038d62b3e82f42ad0e3a 295 PANTHER PTHR22911:SF64 1 294 1.7E-89 T 22-04-2016 VPUCM_RS14815 46609d35b69e038d62b3e82f42ad0e3a 295 SUPERFAMILY SSF103481 36 140 5.1E-13 T 22-04-2016 VPUCM_RS03635 37759b3b79e97f1a4301c2cc6b7eca39 412 PANTHER PTHR30408 213 411 5.4E-18 T 22-04-2016 VPUCM_RS03635 37759b3b79e97f1a4301c2cc6b7eca39 412 Pfam PF01420 Type I restriction modification DNA specificity domain 226 399 4.6E-12 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VPUCM_RS03635 37759b3b79e97f1a4301c2cc6b7eca39 412 Pfam PF01420 Type I restriction modification DNA specificity domain 18 196 1.3E-9 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VPUCM_RS03635 37759b3b79e97f1a4301c2cc6b7eca39 412 PANTHER PTHR30408:SF2 213 411 5.4E-18 T 22-04-2016 VPUCM_RS03635 37759b3b79e97f1a4301c2cc6b7eca39 412 SUPERFAMILY SSF116734 213 411 2.45E-38 T 22-04-2016 VPUCM_RS03635 37759b3b79e97f1a4301c2cc6b7eca39 412 SUPERFAMILY SSF116734 4 210 2.13E-35 T 22-04-2016 VPUCM_RS05315 2d7bb2442cadefbedff1946a4f077e2c 100 Gene3D G3DSA:1.10.10.10 3 86 8.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05315 2d7bb2442cadefbedff1946a4f077e2c 100 SUPERFAMILY SSF46767 2 84 3.79E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VPUCM_RS05315 2d7bb2442cadefbedff1946a4f077e2c 100 PANTHER PTHR10815 1 100 4.2E-42 T 22-04-2016 VPUCM_RS05315 2d7bb2442cadefbedff1946a4f077e2c 100 PANTHER PTHR10815:SF2 1 100 4.2E-42 T 22-04-2016 VPUCM_RS05315 2d7bb2442cadefbedff1946a4f077e2c 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 3.9E-24 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VPUCM_RS04205 b785ac83e15df789183dc76d91d458df 477 PIRSF PIRSF006060 1 476 5.2E-52 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS04205 b785ac83e15df789183dc76d91d458df 477 PANTHER PTHR11785:SF342 39 456 1.9E-72 T 22-04-2016 VPUCM_RS04205 b785ac83e15df789183dc76d91d458df 477 Pfam PF13520 Amino acid permease 11 443 7.7E-31 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS04205 b785ac83e15df789183dc76d91d458df 477 PANTHER PTHR11785 39 456 1.9E-72 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS03190 22d3f61b1af0a474e9b0562952a3bb86 195 Pfam PF09335 SNARE associated Golgi protein 29 149 6.2E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein VPUCM_RS03190 22d3f61b1af0a474e9b0562952a3bb86 195 PANTHER PTHR30353 1 192 4.2E-34 T 22-04-2016 IPR032818 DedA family VPUCM_RS02480 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.941 T 22-04-2016 IPR005583 Peroxide stress protein YaaA VPUCM_RS02480 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 Pfam PF03883 Protein of unknown function (DUF328) 1 243 3.6E-95 T 22-04-2016 IPR005583 Peroxide stress protein YaaA VPUCM_RS02480 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 PANTHER PTHR30283:SF3 2 255 2.5E-121 T 22-04-2016 VPUCM_RS02480 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 PANTHER PTHR30283 2 255 2.5E-121 T 22-04-2016 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PANTHER PTHR30161:SF1 3 699 0.0 T 22-04-2016 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PANTHER PTHR30161 3 699 0.0 T 22-04-2016 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PIRSF PIRSF005419 10 699 4.6E-253 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 696 9.5E-267 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 Pfam PF00771 FHIPEP family 32 689 5.0E-270 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS11530 6c71e1e1c9cd4b4392a13f77ea67229c 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.7E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VPUCM_RS09070 f88a69f0c1502f26ca9138cad49429e4 319 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 46.878 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VPUCM_RS09070 f88a69f0c1502f26ca9138cad49429e4 319 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 1.2E-86 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS09070 f88a69f0c1502f26ca9138cad49429e4 319 PANTHER PTHR30606:SF5 4 310 5.8E-137 T 22-04-2016 VPUCM_RS09070 f88a69f0c1502f26ca9138cad49429e4 319 PANTHER PTHR30606 4 310 5.8E-137 T 22-04-2016 VPUCM_RS09070 f88a69f0c1502f26ca9138cad49429e4 319 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 307 2.5E-141 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 VPUCM_RS09070 f88a69f0c1502f26ca9138cad49429e4 319 PIRSF PIRSF026649 4 307 1.6E-89 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS12655 f926530d92eba1ba495cb9db67119879 315 PANTHER PTHR30329:SF4 106 313 5.9E-104 T 22-04-2016 VPUCM_RS12655 f926530d92eba1ba495cb9db67119879 315 PANTHER PTHR30329:SF4 6 71 5.9E-104 T 22-04-2016 VPUCM_RS12655 f926530d92eba1ba495cb9db67119879 315 Gene3D G3DSA:3.30.1330.60 172 300 1.2E-30 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS12655 f926530d92eba1ba495cb9db67119879 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain VPUCM_RS12655 f926530d92eba1ba495cb9db67119879 315 SUPERFAMILY SSF103088 183 300 1.06E-29 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS12655 f926530d92eba1ba495cb9db67119879 315 Pfam PF00691 OmpA family 196 294 2.2E-17 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS12655 f926530d92eba1ba495cb9db67119879 315 PANTHER PTHR30329 106 313 5.9E-104 T 22-04-2016 VPUCM_RS12655 f926530d92eba1ba495cb9db67119879 315 PANTHER PTHR30329 6 71 5.9E-104 T 22-04-2016 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 SUPERFAMILY SSF51366 4 217 1.31E-78 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 Gene3D G3DSA:3.20.20.70 2 220 9.4E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.8E-100 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 PANTHER PTHR11749 2 223 2.1E-141 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 PIRSF PIRSF001461 1 223 3.9E-107 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 PANTHER PTHR11749:SF7 2 223 2.1E-141 T 22-04-2016 VPUCM_RS14345 1c7b58c12ab6a56949b8d3c7ac5255d0 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.6E-92 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VPUCM_RS08455 82f2bd4c3b74be49e813fa18762fc309 249 Gene3D G3DSA:3.40.50.300 7 243 1.7E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08455 82f2bd4c3b74be49e813fa18762fc309 249 PANTHER PTHR24220 10 249 6.4E-193 T 22-04-2016 VPUCM_RS08455 82f2bd4c3b74be49e813fa18762fc309 249 PIRSF PIRSF039085 5 248 8.0E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VPUCM_RS08455 82f2bd4c3b74be49e813fa18762fc309 249 SMART SM00382 33 220 1.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS08455 82f2bd4c3b74be49e813fa18762fc309 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS08455 82f2bd4c3b74be49e813fa18762fc309 249 SUPERFAMILY SSF52540 8 242 5.83E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS08455 82f2bd4c3b74be49e813fa18762fc309 249 PANTHER PTHR24220:SF490 10 249 6.4E-193 T 22-04-2016 VPUCM_RS08455 82f2bd4c3b74be49e813fa18762fc309 249 Pfam PF00005 ABC transporter 24 172 9.1E-39 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS13925 93be22db89a161c43efe39f92aff81ea 106 Pfam PF13466 STAS domain 15 93 1.1E-19 T 22-04-2016 IPR002645 STAS domain VPUCM_RS13925 93be22db89a161c43efe39f92aff81ea 106 SUPERFAMILY SSF52091 14 97 8.83E-15 T 22-04-2016 IPR002645 STAS domain VPUCM_RS13925 93be22db89a161c43efe39f92aff81ea 106 Gene3D G3DSA:3.30.750.24 14 97 2.2E-12 T 22-04-2016 IPR002645 STAS domain VPUCM_RS13925 93be22db89a161c43efe39f92aff81ea 106 PANTHER PTHR35849 1 101 4.8E-33 T 22-04-2016 VPUCM_RS13925 93be22db89a161c43efe39f92aff81ea 106 PANTHER PTHR35849:SF1 1 101 4.8E-33 T 22-04-2016 VPUCM_RS10695 b1f0f3c68a9406e4a91ec1293e2acc67 147 PANTHER PTHR30558:SF7 4 144 2.3E-53 T 22-04-2016 VPUCM_RS10695 b1f0f3c68a9406e4a91ec1293e2acc67 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 9.1E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VPUCM_RS10695 b1f0f3c68a9406e4a91ec1293e2acc67 147 PANTHER PTHR30558 4 144 2.3E-53 T 22-04-2016 VPUCM_RS10720 48a583f1af061715b758f91bc274b979 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 4.9E-172 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VPUCM_RS10720 48a583f1af061715b758f91bc274b979 378 PIRSF PIRSF000267 2 377 1.8E-123 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VPUCM_RS10720 48a583f1af061715b758f91bc274b979 378 PANTHER PTHR30365:SF6 1 378 4.5E-192 T 22-04-2016 VPUCM_RS10720 48a583f1af061715b758f91bc274b979 378 PANTHER PTHR30365 1 378 4.5E-192 T 22-04-2016 VPUCM_RS10720 48a583f1af061715b758f91bc274b979 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.0E-108 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VPUCM_RS05830 cea191a447a8a0a62a691f0f987da389 282 SMART SM00507 156 208 5.0E-5 T 22-04-2016 IPR003615 HNH nuclease VPUCM_RS05830 cea191a447a8a0a62a691f0f987da389 282 Pfam PF01844 HNH endonuclease 169 212 2.3E-7 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 Gene3D G3DSA:3.30.1950.10 119 183 8.5E-10 T 22-04-2016 VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 PANTHER PTHR33619:SF1 112 530 8.7E-31 T 22-04-2016 VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 Pfam PF10531 SLBB domain 487 533 1.5E-6 T 22-04-2016 IPR019554 Soluble ligand binding domain VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 Pfam PF02563 Polysaccharide biosynthesis/export protein 113 185 5.9E-13 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 PANTHER PTHR33619 112 530 8.7E-31 T 22-04-2016 VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 Gene3D G3DSA:3.10.560.10 184 270 4.0E-13 T 22-04-2016 VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 Gene3D G3DSA:3.10.560.10 357 401 6.1E-5 T 22-04-2016 VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 Gene3D G3DSA:3.10.560.10 450 477 6.1E-5 T 22-04-2016 VPUCM_RS01210 eda61b67a7ea16a948bec6c258d5cb7e 582 Gene3D G3DSA:3.10.560.10 478 536 1.5E-10 T 22-04-2016 VPUCM_RS12170 82300c3ce87211a1856a874bc7359961 141 Pfam PF05130 FlgN protein 2 131 4.0E-26 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VPUCM_RS12170 82300c3ce87211a1856a874bc7359961 141 Gene3D G3DSA:1.20.58.300 1 113 1.3E-22 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VPUCM_RS12170 82300c3ce87211a1856a874bc7359961 141 SUPERFAMILY SSF140566 1 113 1.31E-23 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VPUCM_RS08560 566e8de82f1bc6579f4bf5f262778163 160 SUPERFAMILY SSF55729 4 147 2.29E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS08560 566e8de82f1bc6579f4bf5f262778163 160 PANTHER PTHR23091 1 146 1.4E-22 T 22-04-2016 VPUCM_RS08560 566e8de82f1bc6579f4bf5f262778163 160 Pfam PF00583 Acetyltransferase (GNAT) family 63 146 1.1E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS08560 566e8de82f1bc6579f4bf5f262778163 160 Gene3D G3DSA:3.40.630.30 5 146 1.3E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PANTHER PTHR24322:SF337 165 197 1.4E-71 T 22-04-2016 VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PANTHER PTHR24322:SF337 17 149 1.4E-71 T 22-04-2016 VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 5.1E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.1E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.1E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 SUPERFAMILY SSF51735 9 242 2.1E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.007 T 22-04-2016 VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PANTHER PTHR24322 17 149 1.4E-71 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 Gene3D G3DSA:3.40.50.720 8 243 2.4E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 PANTHER PTHR24322 165 197 1.4E-71 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS10465 46d0f77535e371ff529efccf5aef8627 248 Pfam PF00106 short chain dehydrogenase 13 208 1.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS04010 136ad4ab993620e633b1bd780dcf4146 182 Pfam PF01464 Transglycosylase SLT domain 29 162 9.0E-10 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VPUCM_RS04010 136ad4ab993620e633b1bd780dcf4146 182 Gene3D G3DSA:1.10.530.10 29 174 7.1E-18 T 22-04-2016 VPUCM_RS04010 136ad4ab993620e633b1bd780dcf4146 182 SUPERFAMILY SSF53955 29 72 1.25E-17 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS04010 136ad4ab993620e633b1bd780dcf4146 182 SUPERFAMILY SSF53955 99 178 1.25E-17 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 PANTHER PTHR11880 1 91 6.8E-58 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-37 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 91 2.3E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01450 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 9.2E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 PIRSF PIRSF001365 1 301 8.4E-85 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 3.8E-62 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 SUPERFAMILY SSF51569 3 291 3.45E-86 T 22-04-2016 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 SMART SM01130 4 293 9.9E-98 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 PANTHER PTHR12128 1 290 1.2E-84 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 Gene3D G3DSA:3.20.20.70 2 292 7.3E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.8E-10 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.8E-10 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.8E-10 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VPUCM_RS09385 663a94260a20ce64acab1b5578814c58 304 PANTHER PTHR12128:SF15 1 290 1.2E-84 T 22-04-2016 VPUCM_RS00440 221edd3b6ff04cee70e14edbdcca5857 143 Pfam PF01814 Hemerythrin HHE cation binding domain 4 121 8.6E-12 T 22-04-2016 IPR012312 Haemerythrin-like VPUCM_RS00440 221edd3b6ff04cee70e14edbdcca5857 143 Gene3D G3DSA:1.20.120.520 31 137 5.8E-9 T 22-04-2016 VPUCM_RS11115 71c8b0a657f7955d4e377ebb13d79b3f 182 PIRSF PIRSF000232 1 182 1.5E-62 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- VPUCM_RS11115 71c8b0a657f7955d4e377ebb13d79b3f 182 PANTHER PTHR23026:SF107 1 175 2.3E-86 T 22-04-2016 VPUCM_RS11115 71c8b0a657f7955d4e377ebb13d79b3f 182 PANTHER PTHR23026 1 175 2.3E-86 T 22-04-2016 VPUCM_RS11115 71c8b0a657f7955d4e377ebb13d79b3f 182 SUPERFAMILY SSF55469 1 181 7.85E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 VPUCM_RS11115 71c8b0a657f7955d4e377ebb13d79b3f 182 Gene3D G3DSA:3.40.109.10 1 181 5.0E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 VPUCM_RS11115 71c8b0a657f7955d4e377ebb13d79b3f 182 Pfam PF00881 Nitroreductase family 8 161 8.1E-23 T 22-04-2016 IPR029479 Nitroreductase VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.9E-43 T 22-04-2016 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.6E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:3.40.50.2300 54 173 1.8E-45 T 22-04-2016 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.832 T 22-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:1.10.260.40 2 53 8.8E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 SMART SM00354 1 71 1.3E-38 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 PANTHER PTHR30146 1 331 7.6E-160 T 22-04-2016 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 PANTHER PTHR30146:SF38 1 331 7.6E-160 T 22-04-2016 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:3.40.50.2300 174 311 9.6E-55 T 22-04-2016 VPUCM_RS10820 3de17b4415c9331de5f35d1839ed939a 334 SUPERFAMILY SSF53822 60 331 2.94E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VPUCM_RS00615 f2d417bb2d68ed2952a06d4e53f8066f 180 Pfam PF13521 AAA domain 4 164 6.7E-40 T 22-04-2016 VPUCM_RS00615 f2d417bb2d68ed2952a06d4e53f8066f 180 Gene3D G3DSA:3.40.50.300 1 167 4.2E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00615 f2d417bb2d68ed2952a06d4e53f8066f 180 SUPERFAMILY SSF52540 3 171 1.85E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS02125 ffd8ae2e708c011b2561c9eba7cccff2 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 2.4E-70 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VPUCM_RS02125 ffd8ae2e708c011b2561c9eba7cccff2 194 Gene3D G3DSA:3.40.50.1820 4 188 7.7E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS02125 ffd8ae2e708c011b2561c9eba7cccff2 194 PANTHER PTHR35602:SF3 1 194 1.0E-108 T 22-04-2016 VPUCM_RS02125 ffd8ae2e708c011b2561c9eba7cccff2 194 SUPERFAMILY SSF53474 5 192 9.31E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS02125 ffd8ae2e708c011b2561c9eba7cccff2 194 PANTHER PTHR35602 1 194 1.0E-108 T 22-04-2016 VPUCM_RS07560 cf98b33c9d80968d3acfab8167101f45 336 Pfam PF11279 Protein of unknown function (DUF3080) 26 328 3.2E-94 T 22-04-2016 IPR021431 Protein of unknown function DUF3080 VPUCM_RS23560 31bc37e71ef284d6fefaadaab83773cc 219 PANTHER PTHR18934 3 130 1.7E-30 T 22-04-2016 VPUCM_RS23560 31bc37e71ef284d6fefaadaab83773cc 219 Pfam PF11898 Domain of unknown function (DUF3418) 1 218 6.9E-105 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal VPUCM_RS23560 31bc37e71ef284d6fefaadaab83773cc 219 PANTHER PTHR18934:SF109 3 130 1.7E-30 T 22-04-2016 VPUCM_RS04485 c93ab0174b591ae458734a543147fd9d 261 Pfam PF04205 FMN-binding domain 148 243 5.7E-14 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VPUCM_RS04485 c93ab0174b591ae458734a543147fd9d 261 PANTHER PTHR37838 1 261 4.3E-100 T 22-04-2016 VPUCM_RS04485 c93ab0174b591ae458734a543147fd9d 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 35.403 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VPUCM_RS04485 c93ab0174b591ae458734a543147fd9d 261 SMART SM00900 148 246 8.7E-32 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VPUCM_RS04485 c93ab0174b591ae458734a543147fd9d 261 PANTHER PTHR37838:SF1 1 261 4.3E-100 T 22-04-2016 VPUCM_RS04485 c93ab0174b591ae458734a543147fd9d 261 PIRSF PIRSF009437 1 261 3.8E-103 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VPUCM_RS04485 c93ab0174b591ae458734a543147fd9d 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 3.6E-96 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VPUCM_RS12470 c838035ff294595391f79e160b558804 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 6.6E-47 T 22-04-2016 IPR009912 Zinc-ribbon containing domain VPUCM_RS15900 95f947c1cc032d553bb1d0878d8d71a4 481 PIRSF PIRSF006247 1 481 5.3E-166 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VPUCM_RS15900 95f947c1cc032d553bb1d0878d8d71a4 481 PANTHER PTHR32024 1 481 3.1E-303 T 22-04-2016 VPUCM_RS15900 95f947c1cc032d553bb1d0878d8d71a4 481 PANTHER PTHR32024:SF3 1 481 3.1E-303 T 22-04-2016 VPUCM_RS15900 95f947c1cc032d553bb1d0878d8d71a4 481 Pfam PF02386 Cation transport protein 51 475 2.5E-49 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VPUCM_RS15900 95f947c1cc032d553bb1d0878d8d71a4 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.0E-114 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VPUCM_RS03770 8b92fe55cf56b7b325ec71c9699b05de 336 SUPERFAMILY SSF81301 5 211 1.32E-28 T 22-04-2016 VPUCM_RS03770 8b92fe55cf56b7b325ec71c9699b05de 336 Gene3D G3DSA:3.30.460.10 47 162 1.2E-17 T 22-04-2016 VPUCM_RS03770 8b92fe55cf56b7b325ec71c9699b05de 336 Pfam PF04607 Region found in RelA / SpoT proteins 53 179 5.7E-19 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VPUCM_RS03770 8b92fe55cf56b7b325ec71c9699b05de 336 SMART SM00954 52 182 9.0E-16 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 Gene3D G3DSA:1.20.272.20 223 334 2.8E-44 T 22-04-2016 VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 2.1E-46 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 2.0E-30 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 SUPERFAMILY SSF48019 211 331 7.14E-31 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 Gene3D G3DSA:3.40.50.300 1 138 2.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 SUPERFAMILY SSF52540 1 208 3.66E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 Gene3D G3DSA:1.10.8.60 144 222 6.5E-32 T 22-04-2016 VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 2.7E-102 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VPUCM_RS12485 3af0ddb6cc98cd68aa663d2359596a23 339 PANTHER PTHR34388 1 332 3.7E-74 T 22-04-2016 VPUCM_RS05560 fc1333f4bddac08923c0f74664701605 166 SUPERFAMILY SSF116960 1 166 1.22E-65 T 22-04-2016 VPUCM_RS05560 fc1333f4bddac08923c0f74664701605 166 PIRSF PIRSF006272 1 166 6.5E-79 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VPUCM_RS05560 fc1333f4bddac08923c0f74664701605 166 Gene3D G3DSA:1.10.3190.10 53 166 2.7E-47 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain VPUCM_RS05560 fc1333f4bddac08923c0f74664701605 166 Gene3D G3DSA:1.10.287.680 1 52 5.3E-30 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain VPUCM_RS05560 fc1333f4bddac08923c0f74664701605 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.917 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VPUCM_RS05560 fc1333f4bddac08923c0f74664701605 166 Pfam PF03887 YfbU domain 1 166 2.2E-70 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VPUCM_RS05560 fc1333f4bddac08923c0f74664701605 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 8.0E-96 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VPUCM_RS09250 0ebb6aaeb746c54edd44cdfc7cfb1229 120 Gene3D G3DSA:3.10.180.10 2 117 1.4E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS09250 0ebb6aaeb746c54edd44cdfc7cfb1229 120 PANTHER PTHR35006 1 117 1.7E-29 T 22-04-2016 VPUCM_RS09250 0ebb6aaeb746c54edd44cdfc7cfb1229 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 115 3.9E-5 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VPUCM_RS09250 0ebb6aaeb746c54edd44cdfc7cfb1229 120 SUPERFAMILY SSF54593 2 118 1.14E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS07575 c5ccb96f2d1e84d40dfde27878226057 64 PIRSF PIRSF037225 1 64 4.3E-24 T 22-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 VPUCM_RS07575 c5ccb96f2d1e84d40dfde27878226057 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 4.4E-21 T 22-04-2016 IPR025990 Cysteine-rich CPXCG protein VPUCM_RS05290 dcc1797717715167a56b4efcedfcaafb 364 PANTHER PTHR10314 6 350 2.6E-203 T 22-04-2016 VPUCM_RS05290 dcc1797717715167a56b4efcedfcaafb 364 Gene3D G3DSA:3.40.50.1100 48 143 5.5E-25 T 22-04-2016 VPUCM_RS05290 dcc1797717715167a56b4efcedfcaafb 364 Gene3D G3DSA:3.40.50.1100 144 333 8.8E-36 T 22-04-2016 VPUCM_RS05290 dcc1797717715167a56b4efcedfcaafb 364 PANTHER PTHR10314:SF126 6 350 2.6E-203 T 22-04-2016 VPUCM_RS05290 dcc1797717715167a56b4efcedfcaafb 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 7.2E-43 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS05290 dcc1797717715167a56b4efcedfcaafb 364 SUPERFAMILY SSF53686 23 336 2.1E-71 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 PANTHER PTHR24322:SF57 4 122 5.5E-30 T 22-04-2016 VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 PANTHER PTHR24322:SF57 141 172 5.5E-30 T 22-04-2016 VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 3.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 3.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 3.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 PANTHER PTHR24322 4 122 5.5E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 PANTHER PTHR24322 141 172 5.5E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 SUPERFAMILY SSF51735 2 205 9.57E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 Pfam PF00106 short chain dehydrogenase 2 182 2.5E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VPUCM_RS13780 cf8871b622647b09d5b6fb7819aae8dd 221 Gene3D G3DSA:3.40.50.720 2 198 2.3E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS06870 3d5830e1d828b614b9ec2ecfc87b72c8 160 SUPERFAMILY SSF81301 1 155 1.96E-36 T 22-04-2016 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 PANTHER PTHR30126 1 303 7.9E-184 T 22-04-2016 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 SUPERFAMILY SSF46785 1 112 2.18E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:1.10.10.10 1 87 1.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:3.40.190.10 90 180 8.9E-14 T 22-04-2016 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 SUPERFAMILY SSF53850 89 296 3.53E-40 T 22-04-2016 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 Pfam PF03466 LysR substrate binding domain 89 293 1.4E-41 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:3.40.190.10 181 266 3.1E-17 T 22-04-2016 VPUCM_RS06270 e7d6af1ab77eeac711224feb223224d9 303 PANTHER PTHR30126:SF25 1 303 7.9E-184 T 22-04-2016 VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 PANTHER PTHR24220 5 238 1.5E-151 T 22-04-2016 VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 SUPERFAMILY SSF52540 3 237 4.97E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 PANTHER PTHR24220:SF497 5 238 1.5E-151 T 22-04-2016 VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 Pfam PF00005 ABC transporter 20 166 9.5E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 3.5E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 4.0E-126 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 Gene3D G3DSA:3.40.50.300 3 235 1.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13970 52042bc138372e7a73b424410dce1230 241 SMART SM00382 28 231 2.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS12215 faea831d5754b9be3d973d1250af1753 373 Pfam PF13609 Gram-negative porin 10 342 2.9E-35 T 22-04-2016 VPUCM_RS12215 faea831d5754b9be3d973d1250af1753 373 Gene3D G3DSA:2.40.160.10 43 373 5.0E-41 T 22-04-2016 IPR023614 Porin domain VPUCM_RS12215 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 177 188 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VPUCM_RS12215 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 73 84 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VPUCM_RS12215 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 365 373 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VPUCM_RS12215 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 117 127 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VPUCM_RS12215 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 278 290 5.2E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VPUCM_RS12215 faea831d5754b9be3d973d1250af1753 373 SUPERFAMILY SSF56935 44 373 6.11E-41 T 22-04-2016 VPUCM_RS01990 5464d997a37488109fafd185cc5da92d 267 Pfam PF03180 NLPA lipoprotein 31 267 1.2E-86 T 22-04-2016 IPR004872 Lipoprotein NlpA family VPUCM_RS01990 5464d997a37488109fafd185cc5da92d 267 SUPERFAMILY SSF53850 31 267 1.88E-82 T 22-04-2016 VPUCM_RS01990 5464d997a37488109fafd185cc5da92d 267 PANTHER PTHR30429 7 267 8.6E-115 T 22-04-2016 IPR004872 Lipoprotein NlpA family VPUCM_RS01990 5464d997a37488109fafd185cc5da92d 267 Gene3D G3DSA:3.40.190.10 28 159 2.8E-54 T 22-04-2016 VPUCM_RS01990 5464d997a37488109fafd185cc5da92d 267 PIRSF PIRSF002854 3 267 9.1E-89 T 22-04-2016 IPR004872 Lipoprotein NlpA family VPUCM_RS06365 3ecbcb6d8c311fc1482ad0e75e317609 285 PANTHER PTHR30007 1 275 3.4E-102 T 22-04-2016 VPUCM_RS06365 3ecbcb6d8c311fc1482ad0e75e317609 285 Gene3D G3DSA:3.20.20.140 1 88 6.5E-48 T 22-04-2016 VPUCM_RS06365 3ecbcb6d8c311fc1482ad0e75e317609 285 Gene3D G3DSA:3.20.20.140 157 261 6.5E-48 T 22-04-2016 VPUCM_RS06365 3ecbcb6d8c311fc1482ad0e75e317609 285 SUPERFAMILY SSF89550 165 275 8.63E-55 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VPUCM_RS06365 3ecbcb6d8c311fc1482ad0e75e317609 285 SUPERFAMILY SSF89550 1 83 8.63E-55 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VPUCM_RS06365 3ecbcb6d8c311fc1482ad0e75e317609 285 Pfam PF02811 PHP domain 4 181 1.6E-10 T 22-04-2016 IPR004013 PHP domain GO:0003824 VPUCM_RS06365 3ecbcb6d8c311fc1482ad0e75e317609 285 SMART SM00481 3 70 2.5E-18 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VPUCM_RS06365 3ecbcb6d8c311fc1482ad0e75e317609 285 PANTHER PTHR30007:SF4 1 275 3.4E-102 T 22-04-2016 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 Gene3D G3DSA:3.30.70.260 1 78 8.9E-36 T 22-04-2016 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 Pfam PF13710 ACT domain 11 73 9.9E-18 T 22-04-2016 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 Gene3D G3DSA:3.30.70.1150 83 163 9.2E-29 T 22-04-2016 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 SUPERFAMILY SSF55021 1 75 2.69E-22 T 22-04-2016 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.2E-25 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-37 T 22-04-2016 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 SUPERFAMILY SSF55021 79 162 6.51E-27 T 22-04-2016 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.1E-63 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VPUCM_RS01880 5d2dbaa3ecab8f3f0e963a446b11de62 164 PANTHER PTHR30239 1 162 9.9E-92 T 22-04-2016 VPUCM_RS09850 ebfb840307905c792994a4ea0c1ec2ba 412 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 2.0E-88 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VPUCM_RS09850 ebfb840307905c792994a4ea0c1ec2ba 412 Gene3D G3DSA:3.40.50.1970 1 179 1.6E-48 T 22-04-2016 VPUCM_RS09850 ebfb840307905c792994a4ea0c1ec2ba 412 PANTHER PTHR11496:SF68 1 386 8.3E-142 T 22-04-2016 VPUCM_RS09850 ebfb840307905c792994a4ea0c1ec2ba 412 SUPERFAMILY SSF56796 1 380 7.2E-87 T 22-04-2016 VPUCM_RS09850 ebfb840307905c792994a4ea0c1ec2ba 412 Gene3D G3DSA:1.20.1090.10 188 381 2.2E-39 T 22-04-2016 VPUCM_RS09850 ebfb840307905c792994a4ea0c1ec2ba 412 PANTHER PTHR11496 1 386 8.3E-142 T 22-04-2016 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 110 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 Gene3D G3DSA:3.30.200.20 65 188 4.6E-28 T 22-04-2016 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 PANTHER PTHR24362:SF160 44 319 1.8E-47 T 22-04-2016 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 PANTHER PTHR24362 44 319 1.8E-47 T 22-04-2016 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 198 210 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 Pfam PF00069 Protein kinase domain 79 280 2.0E-38 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 SMART SM00220 79 325 4.0E-28 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 Gene3D G3DSA:1.10.510.10 189 274 3.0E-23 T 22-04-2016 VPUCM_RS00305 979033fb994dec35d5931095ceed79f5 450 SUPERFAMILY SSF56112 73 281 8.09E-52 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS15500 73ee3dc0a769e0f4b20c6010f12cacd0 164 Gene3D G3DSA:3.90.190.10 8 162 1.6E-38 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VPUCM_RS15500 73ee3dc0a769e0f4b20c6010f12cacd0 164 SUPERFAMILY SSF52799 5 161 1.63E-32 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VPUCM_RS15500 73ee3dc0a769e0f4b20c6010f12cacd0 164 PANTHER PTHR23339:SF64 21 159 2.2E-24 T 22-04-2016 VPUCM_RS15500 73ee3dc0a769e0f4b20c6010f12cacd0 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 VPUCM_RS15500 73ee3dc0a769e0f4b20c6010f12cacd0 164 PANTHER PTHR23339 21 159 2.2E-24 T 22-04-2016 VPUCM_RS15500 73ee3dc0a769e0f4b20c6010f12cacd0 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 17 128 9.9E-10 T 22-04-2016 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04660+3.1.3.16 VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 PANTHER PTHR30537:SF19 1 291 9.3E-89 T 22-04-2016 VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 SUPERFAMILY SSF46785 2 112 1.16E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 Gene3D G3DSA:1.10.10.10 3 84 4.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.9E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 Gene3D G3DSA:3.40.190.10 157 243 1.6E-10 T 22-04-2016 VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 Gene3D G3DSA:3.40.190.10 85 131 8.5E-7 T 22-04-2016 VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 SUPERFAMILY SSF53850 89 291 6.88E-27 T 22-04-2016 VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 Pfam PF03466 LysR substrate binding domain 88 289 5.2E-20 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS13460 2d082ce5a05446222e41ab37f2cb14ea 297 PANTHER PTHR30537 1 291 9.3E-89 T 22-04-2016 VPUCM_RS06920 78d7afb7d9845da23fab11377de4faf6 319 Gene3D G3DSA:3.30.200.20 14 95 2.5E-4 T 22-04-2016 VPUCM_RS06920 78d7afb7d9845da23fab11377de4faf6 319 SUPERFAMILY SSF56112 4 268 1.93E-38 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS06920 78d7afb7d9845da23fab11377de4faf6 319 Gene3D G3DSA:3.90.1200.10 102 266 1.7E-24 T 22-04-2016 VPUCM_RS06920 78d7afb7d9845da23fab11377de4faf6 319 Pfam PF01636 Phosphotransferase enzyme family 21 245 6.9E-25 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase VPUCM_RS11435 1e3e613abe17e38b1667cf42f630872c 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 7.0E-55 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family VPUCM_RS11435 1e3e613abe17e38b1667cf42f630872c 161 PANTHER PTHR30009 12 138 6.7E-37 T 22-04-2016 VPUCM_RS11435 1e3e613abe17e38b1667cf42f630872c 161 PANTHER PTHR30009:SF6 12 138 6.7E-37 T 22-04-2016 VPUCM_RS05760 3edfc7edf3ba1b0a402dd20583ff2bdb 138 PANTHER PTHR40043:SF1 4 138 9.9E-35 T 22-04-2016 VPUCM_RS05760 3edfc7edf3ba1b0a402dd20583ff2bdb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 4.4E-12 T 22-04-2016 IPR007140 Protein of unknown function DUF350 VPUCM_RS05760 3edfc7edf3ba1b0a402dd20583ff2bdb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 1.3E-13 T 22-04-2016 IPR007140 Protein of unknown function DUF350 VPUCM_RS05760 3edfc7edf3ba1b0a402dd20583ff2bdb 138 PANTHER PTHR40043 4 138 9.9E-35 T 22-04-2016 VPUCM_RS04105 043d625e33977edb9408b0c8a0fc9627 69 Pfam PF06568 Domain of unknown function (DUF1127) 24 59 5.5E-11 T 22-04-2016 IPR009506 Protein of unknown function DUF1127 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 SUPERFAMILY SSF46689 179 226 2.87E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 Pfam PF12833 Helix-turn-helix domain 199 276 2.7E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 SUPERFAMILY SSF46689 229 277 5.82E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 SMART SM00342 193 276 4.0E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 PANTHER PTHR11019:SF81 181 284 3.3E-31 T 22-04-2016 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 Gene3D G3DSA:1.10.10.60 177 229 5.4E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 PANTHER PTHR11019 181 284 3.3E-31 T 22-04-2016 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 Gene3D G3DSA:1.10.10.60 230 278 4.2E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 5.9E-8 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS08835 bb992d0aaed865bb8a2507423f5f855a 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 5.9E-8 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS10500 85fe0608a3c9a0181678607f988bac1d 383 SUPERFAMILY SSF52151 25 304 2.88E-35 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VPUCM_RS10500 85fe0608a3c9a0181678607f988bac1d 383 PANTHER PTHR14226 13 221 1.7E-59 T 22-04-2016 VPUCM_RS10500 85fe0608a3c9a0181678607f988bac1d 383 PANTHER PTHR14226 267 363 1.7E-59 T 22-04-2016 VPUCM_RS10500 85fe0608a3c9a0181678607f988bac1d 383 Pfam PF01734 Patatin-like phospholipase 30 199 1.9E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VPUCM_RS10500 85fe0608a3c9a0181678607f988bac1d 383 PANTHER PTHR14226:SF25 13 221 1.7E-59 T 22-04-2016 VPUCM_RS10500 85fe0608a3c9a0181678607f988bac1d 383 PANTHER PTHR14226:SF25 267 363 1.7E-59 T 22-04-2016 VPUCM_RS04780 3b9a739993e2ddec0bc3380b32bf97d2 136 PANTHER PTHR13355:SF5 29 136 2.7E-13 T 22-04-2016 VPUCM_RS04780 3b9a739993e2ddec0bc3380b32bf97d2 136 Gene3D G3DSA:3.40.630.30 13 129 6.8E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS04780 3b9a739993e2ddec0bc3380b32bf97d2 136 Pfam PF13508 Acetyltransferase (GNAT) domain 55 119 5.6E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS04780 3b9a739993e2ddec0bc3380b32bf97d2 136 PANTHER PTHR13355 29 136 2.7E-13 T 22-04-2016 VPUCM_RS04780 3b9a739993e2ddec0bc3380b32bf97d2 136 SUPERFAMILY SSF55729 13 123 4.01E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10290 7673c97366dd663e04c093ddbfef7a6d 404 Pfam PF12704 MacB-like periplasmic core domain 19 236 1.3E-23 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VPUCM_RS10290 7673c97366dd663e04c093ddbfef7a6d 404 PANTHER PTHR30572 1 403 2.7E-63 T 22-04-2016 VPUCM_RS10290 7673c97366dd663e04c093ddbfef7a6d 404 Pfam PF02687 FtsX-like permease family 282 396 1.5E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VPUCM_RS11660 ca318126169b7d58b8fb1ff2d120471a 300 SUPERFAMILY SSF54909 1 297 3.93E-93 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS11660 ca318126169b7d58b8fb1ff2d120471a 300 Pfam PF04261 Dyp-type peroxidase family 5 293 4.3E-88 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VPUCM_RS11660 ca318126169b7d58b8fb1ff2d120471a 300 PANTHER PTHR30521 23 297 3.0E-109 T 22-04-2016 VPUCM_RS11660 ca318126169b7d58b8fb1ff2d120471a 300 PANTHER PTHR30521:SF0 23 297 3.0E-109 T 22-04-2016 VPUCM_RS11660 ca318126169b7d58b8fb1ff2d120471a 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 4.4E-83 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VPUCM_RS15600 aba98cfd888b91e8d0bea6412ce1cc03 242 Gene3D G3DSA:3.40.50.10090 143 241 7.4E-6 T 22-04-2016 VPUCM_RS15600 aba98cfd888b91e8d0bea6412ce1cc03 242 SUPERFAMILY SSF69618 1 241 1.7E-51 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15600 aba98cfd888b91e8d0bea6412ce1cc03 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 236 2.0E-31 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VPUCM_RS15600 aba98cfd888b91e8d0bea6412ce1cc03 242 Gene3D G3DSA:3.40.50.10090 30 142 9.3E-15 T 22-04-2016 VPUCM_RS15600 aba98cfd888b91e8d0bea6412ce1cc03 242 PANTHER PTHR38042:SF1 1 242 5.5E-64 T 22-04-2016 VPUCM_RS15600 aba98cfd888b91e8d0bea6412ce1cc03 242 PANTHER PTHR38042 1 242 5.5E-64 T 22-04-2016 VPUCM_RS12160 55024be1b2eb19e3fb9702f6a709db3d 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.0E-41 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VPUCM_RS12160 55024be1b2eb19e3fb9702f6a709db3d 248 PANTHER PTHR36307 27 246 9.1E-42 T 22-04-2016 VPUCM_RS12160 55024be1b2eb19e3fb9702f6a709db3d 248 SMART SM00858 126 188 1.2E-9 T 22-04-2016 IPR013974 SAF domain VPUCM_RS12160 55024be1b2eb19e3fb9702f6a709db3d 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 52 246 4.1E-53 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VPUCM_RS09975 22bff49cf30d83ca51a8129dae122c18 171 Gene3D G3DSA:3.40.630.30 1 158 4.7E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS09975 22bff49cf30d83ca51a8129dae122c18 171 PANTHER PTHR23091:SF274 1 150 5.8E-19 T 22-04-2016 VPUCM_RS09975 22bff49cf30d83ca51a8129dae122c18 171 SUPERFAMILY SSF55729 1 150 2.74E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS09975 22bff49cf30d83ca51a8129dae122c18 171 Pfam PF00583 Acetyltransferase (GNAT) family 64 143 5.8E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS09975 22bff49cf30d83ca51a8129dae122c18 171 PANTHER PTHR23091 1 150 5.8E-19 T 22-04-2016 VPUCM_RS00625 5d900ee438e6030ac98f1f7c86e8eb1c 314 PANTHER PTHR30213 1 288 8.3E-104 T 22-04-2016 VPUCM_RS00625 5d900ee438e6030ac98f1f7c86e8eb1c 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 8 296 23.777 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial VPUCM_RS00625 5d900ee438e6030ac98f1f7c86e8eb1c 314 PANTHER PTHR30213:SF0 1 288 8.3E-104 T 22-04-2016 VPUCM_RS00625 5d900ee438e6030ac98f1f7c86e8eb1c 314 PIRSF PIRSF035875 9 296 1.3E-53 T 22-04-2016 IPR017039 Virulence factor BrkB VPUCM_RS00625 5d900ee438e6030ac98f1f7c86e8eb1c 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 4.9E-81 T 22-04-2016 IPR017039 Virulence factor BrkB VPUCM_RS00625 5d900ee438e6030ac98f1f7c86e8eb1c 314 Pfam PF03631 Virulence factor BrkB 33 279 2.3E-58 T 22-04-2016 IPR017039 Virulence factor BrkB VPUCM_RS09500 64e8e7faade55fefa20fd586a3285b48 250 PANTHER PTHR34148 1 250 2.4E-53 T 22-04-2016 VPUCM_RS09500 64e8e7faade55fefa20fd586a3285b48 250 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 250 46.875 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VPUCM_RS09500 64e8e7faade55fefa20fd586a3285b48 250 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 6 243 4.3E-37 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VPUCM_RS09500 64e8e7faade55fefa20fd586a3285b48 250 Pfam PF02654 Cobalamin-5-phosphate synthase 7 241 8.0E-54 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VPUCM_RS09500 64e8e7faade55fefa20fd586a3285b48 250 PANTHER PTHR34148:SF1 1 250 2.4E-53 T 22-04-2016 VPUCM_RS10705 bd8fedddb1f5b9b93a25268b4776dc63 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 7.0E-50 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- VPUCM_RS10705 bd8fedddb1f5b9b93a25268b4776dc63 139 Pfam PF03061 Thioesterase superfamily 22 106 1.6E-17 T 22-04-2016 IPR006683 Thioesterase domain VPUCM_RS10705 bd8fedddb1f5b9b93a25268b4776dc63 139 Gene3D G3DSA:3.10.129.10 6 131 9.9E-49 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS10705 bd8fedddb1f5b9b93a25268b4776dc63 139 PANTHER PTHR31793 2 134 1.7E-48 T 22-04-2016 VPUCM_RS10705 bd8fedddb1f5b9b93a25268b4776dc63 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 1.3E-37 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VPUCM_RS10705 bd8fedddb1f5b9b93a25268b4776dc63 139 SUPERFAMILY SSF54637 5 132 5.32E-42 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS10705 bd8fedddb1f5b9b93a25268b4776dc63 139 PIRSF PIRSF003230 2 138 3.5E-47 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VPUCM_RS10705 bd8fedddb1f5b9b93a25268b4776dc63 139 PANTHER PTHR31793:SF9 2 134 1.7E-48 T 22-04-2016 VPUCM_RS07640 395273be0c6cf25345aedc208cf1d06d 249 PANTHER PTHR21392:SF1 1 245 3.1E-97 T 22-04-2016 VPUCM_RS07640 395273be0c6cf25345aedc208cf1d06d 249 SMART SM01144 27 227 7.4E-60 T 22-04-2016 IPR005636 DTW VPUCM_RS07640 395273be0c6cf25345aedc208cf1d06d 249 PANTHER PTHR21392 1 245 3.1E-97 T 22-04-2016 VPUCM_RS07640 395273be0c6cf25345aedc208cf1d06d 249 Pfam PF03942 DTW domain 29 221 1.0E-39 T 22-04-2016 IPR005636 DTW VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 Gene3D G3DSA:1.10.10.10 122 219 2.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 SUPERFAMILY SSF46894 119 217 7.65E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 PANTHER PTHR26402:SF316 1 219 1.8E-97 T 22-04-2016 VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 SUPERFAMILY SSF52172 1 133 2.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 Gene3D G3DSA:3.40.50.2300 1 120 5.2E-34 T 22-04-2016 VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 SMART SM00448 1 112 1.7E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 SMART SM00862 145 216 4.2E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.6E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 PANTHER PTHR26402 1 219 1.8E-97 T 22-04-2016 VPUCM_RS09960 5267d1a01468442e05cbd5839b4699f1 219 Pfam PF00072 Response regulator receiver domain 3 112 6.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS05900 6f50f36ae387de069ea155e58cbe2abc 545 Pfam PF00672 HAMP domain 197 264 2.1E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS05900 6f50f36ae387de069ea155e58cbe2abc 545 SMART SM00304 303 356 53.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS05900 6f50f36ae387de069ea155e58cbe2abc 545 SMART SM00304 214 268 1.8E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VPUCM_RS05900 6f50f36ae387de069ea155e58cbe2abc 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 543 7.5E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS05900 6f50f36ae387de069ea155e58cbe2abc 545 Gene3D G3DSA:1.10.287.950 298 512 4.5E-55 T 22-04-2016 VPUCM_RS05900 6f50f36ae387de069ea155e58cbe2abc 545 SMART SM00283 283 544 4.7E-74 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VPUCM_RS05900 6f50f36ae387de069ea155e58cbe2abc 545 PANTHER PTHR32089 179 545 1.8E-117 T 22-04-2016 VPUCM_RS05900 6f50f36ae387de069ea155e58cbe2abc 545 SUPERFAMILY SSF58104 236 545 2.62E-75 T 22-04-2016 VPUCM_RS13055 72dada830ed5a4bf9a2879475ef15f52 246 SUPERFAMILY SSF160950 1 245 4.32E-94 T 22-04-2016 VPUCM_RS13055 72dada830ed5a4bf9a2879475ef15f52 246 PANTHER PTHR39455:SF1 1 246 1.0E-109 T 22-04-2016 VPUCM_RS13055 72dada830ed5a4bf9a2879475ef15f52 246 Pfam PF07072 Protein of unknown function (DUF1342) 18 224 4.6E-76 T 22-04-2016 IPR009777 Cell division protein ZapD VPUCM_RS13055 72dada830ed5a4bf9a2879475ef15f52 246 PANTHER PTHR39455 1 246 1.0E-109 T 22-04-2016 VPUCM_RS13055 72dada830ed5a4bf9a2879475ef15f52 246 Gene3D G3DSA:2.60.440.10 173 245 3.8E-34 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain VPUCM_RS13055 72dada830ed5a4bf9a2879475ef15f52 246 Gene3D G3DSA:1.10.3900.10 12 172 1.9E-63 T 22-04-2016 VPUCM_RS13055 72dada830ed5a4bf9a2879475ef15f52 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.839 T 22-04-2016 IPR009777 Cell division protein ZapD VPUCM_RS00365 ec66f06c03285be91c504f0adaf390fe 279 PANTHER PTHR37426 2 279 3.7E-157 T 22-04-2016 VPUCM_RS00365 ec66f06c03285be91c504f0adaf390fe 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.412 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VPUCM_RS00365 ec66f06c03285be91c504f0adaf390fe 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 8.2E-116 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VPUCM_RS00365 ec66f06c03285be91c504f0adaf390fe 279 SUPERFAMILY SSF53335 9 273 5.32E-96 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00365 ec66f06c03285be91c504f0adaf390fe 279 Gene3D G3DSA:3.40.50.150 1 279 1.6E-115 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS00365 ec66f06c03285be91c504f0adaf390fe 279 PANTHER PTHR37426:SF1 2 279 3.7E-157 T 22-04-2016 VPUCM_RS04505 9fa2d320eb32074c74dfa13668c52538 334 PANTHER PTHR30040:SF3 4 334 3.6E-180 T 22-04-2016 VPUCM_RS04505 9fa2d320eb32074c74dfa13668c52538 334 PANTHER PTHR30040 4 334 3.6E-180 T 22-04-2016 VPUCM_RS04505 9fa2d320eb32074c74dfa13668c52538 334 Pfam PF02424 ApbE family 31 310 2.5E-86 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VPUCM_RS04505 9fa2d320eb32074c74dfa13668c52538 334 PIRSF PIRSF006268 1 334 5.3E-94 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VPUCM_RS04505 9fa2d320eb32074c74dfa13668c52538 334 SUPERFAMILY SSF143631 24 332 4.71E-101 T 22-04-2016 IPR003374 ApbE-like domain VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 Gene3D G3DSA:1.10.10.60 1070 1114 2.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 SUPERFAMILY SSF63829 363 583 7.19E-8 T 22-04-2016 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 PANTHER PTHR11019 1016 1123 5.7E-23 T 22-04-2016 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1070 1111 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 SMART SM00342 1033 1115 1.6E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 Gene3D G3DSA:2.120.10.30 205 361 5.0E-6 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1099 1115 1.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1084 1099 1.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 SUPERFAMILY SSF46689 1069 1115 4.39E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 Pfam PF12833 Helix-turn-helix domain 1040 1114 6.6E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 PANTHER PTHR11019:SF112 1016 1123 5.7E-23 T 22-04-2016 VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 SUPERFAMILY SSF50969 195 432 6.43E-8 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VPUCM_RS04820 a2124943f793994497b0e849f1eabf57 1123 Gene3D G3DSA:1.10.10.60 1010 1069 2.2E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS10100 46d929dd9492a8f417ab8c8b5f3715d8 456 PANTHER PTHR11616 1 422 4.4E-141 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10100 46d929dd9492a8f417ab8c8b5f3715d8 456 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 14 28 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10100 46d929dd9492a8f417ab8c8b5f3715d8 456 SUPERFAMILY SSF161070 1 437 6.15E-122 T 22-04-2016 VPUCM_RS10100 46d929dd9492a8f417ab8c8b5f3715d8 456 Pfam PF00209 Sodium:neurotransmitter symporter family 1 100 7.2E-16 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10100 46d929dd9492a8f417ab8c8b5f3715d8 456 Pfam PF00209 Sodium:neurotransmitter symporter family 130 427 5.1E-33 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS10100 46d929dd9492a8f417ab8c8b5f3715d8 456 PANTHER PTHR11616:SF167 1 422 4.4E-141 T 22-04-2016 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 SUPERFAMILY SSF51055 387 436 6.67E-15 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 2.0E-11 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 2.0E-11 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 2.0E-11 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 Gene3D G3DSA:2.10.10.20 388 435 2.5E-18 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 SMART SM00020 33 260 2.7E-61 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 Gene3D G3DSA:2.10.10.20 464 486 6.9E-4 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 Pfam PF02839 Carbohydrate binding domain 391 432 1.2E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 Gene3D G3DSA:2.40.10.10 31 115 4.2E-22 T 22-04-2016 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 Gene3D G3DSA:2.40.10.10 161 254 7.7E-32 T 22-04-2016 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 SUPERFAMILY SSF50494 15 265 6.21E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 SMART SM00495 461 512 0.0026 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 SMART SM00495 390 435 1.3E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 Gene3D G3DSA:2.60.40.360 283 359 8.7E-5 T 22-04-2016 IPR008962 PapD-like VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 Gene3D G3DSA:2.40.10.10 116 160 1.5E-9 T 22-04-2016 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 PANTHER PTHR24276 1 265 7.9E-73 T 22-04-2016 VPUCM_RS08555 a25063ad53b4614c80429cf67a240a5b 516 Pfam PF00089 Trypsin 34 258 2.3E-47 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VPUCM_RS15490 7c30401d29541667a33faf7692c681ca 126 SUPERFAMILY SSF54403 43 115 1.02E-16 T 22-04-2016 VPUCM_RS15490 7c30401d29541667a33faf7692c681ca 126 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 81 94 - T 22-04-2016 IPR018073 Proteinase inhibitor I25, cystatin, conserved site VPUCM_RS15490 7c30401d29541667a33faf7692c681ca 126 Pfam PF00031 Cystatin domain 45 100 6.3E-9 T 22-04-2016 IPR000010 Cystatin domain GO:0004869 VPUCM_RS15490 7c30401d29541667a33faf7692c681ca 126 Gene3D G3DSA:3.10.450.10 43 115 7.5E-15 T 22-04-2016 VPUCM_RS11205 ba26c185d65f5677b66684cb5ef1eb62 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.286 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VPUCM_RS11205 ba26c185d65f5677b66684cb5ef1eb62 146 PIRSF PIRSF006173 1 144 7.7E-66 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VPUCM_RS11205 ba26c185d65f5677b66684cb5ef1eb62 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-8 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VPUCM_RS11205 ba26c185d65f5677b66684cb5ef1eb62 146 PANTHER PTHR37421:SF1 1 146 1.1E-71 T 22-04-2016 VPUCM_RS11205 ba26c185d65f5677b66684cb5ef1eb62 146 PANTHER PTHR37421 1 146 1.1E-71 T 22-04-2016 VPUCM_RS12225 84c83ca3158b2b8c28daccf08bf42f71 149 Pfam PF04214 Protein of unknown function, DUF 48 118 3.6E-30 T 22-04-2016 IPR007332 Protein of unknown function DUF411 VPUCM_RS12030 a373d25e46566c94c9911956200aa217 153 PANTHER PTHR33507:SF3 2 153 2.8E-43 T 22-04-2016 VPUCM_RS12030 a373d25e46566c94c9911956200aa217 153 SUPERFAMILY SSF141322 113 151 1.31E-5 T 22-04-2016 VPUCM_RS12030 a373d25e46566c94c9911956200aa217 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 150 7.6E-26 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain VPUCM_RS12030 a373d25e46566c94c9911956200aa217 153 Gene3D G3DSA:2.40.50.140 95 151 4.0E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS12030 a373d25e46566c94c9911956200aa217 153 PANTHER PTHR33507 2 153 2.8E-43 T 22-04-2016 VPUCM_RS06860 fd746e4f420d8cc043c02951d03cd5e0 152 SUPERFAMILY SSF55729 17 139 1.54E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06860 fd746e4f420d8cc043c02951d03cd5e0 152 PANTHER PTHR10545 46 137 2.4E-14 T 22-04-2016 VPUCM_RS06860 fd746e4f420d8cc043c02951d03cd5e0 152 Gene3D G3DSA:3.40.630.30 3 137 1.0E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06860 fd746e4f420d8cc043c02951d03cd5e0 152 Pfam PF00583 Acetyltransferase (GNAT) family 55 135 5.5E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS09455 0cefb989b897459fe4ceaa4654e19282 407 PANTHER PTHR23501:SF11 5 380 2.6E-134 T 22-04-2016 VPUCM_RS09455 0cefb989b897459fe4ceaa4654e19282 407 Pfam PF07690 Major Facilitator Superfamily 16 352 1.5E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS09455 0cefb989b897459fe4ceaa4654e19282 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VPUCM_RS09455 0cefb989b897459fe4ceaa4654e19282 407 SUPERFAMILY SSF103473 9 387 7.32E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS09455 0cefb989b897459fe4ceaa4654e19282 407 Gene3D G3DSA:1.20.1250.20 211 387 5.2E-11 T 22-04-2016 VPUCM_RS09455 0cefb989b897459fe4ceaa4654e19282 407 Gene3D G3DSA:1.20.1250.20 11 191 4.6E-26 T 22-04-2016 VPUCM_RS09455 0cefb989b897459fe4ceaa4654e19282 407 PANTHER PTHR23501 5 380 2.6E-134 T 22-04-2016 VPUCM_RS01155 14585efd1204867396929c990fdbfea6 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 1.7E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01155 14585efd1204867396929c990fdbfea6 139 Pfam PF13633 Prokaryotic N-terminal methylation site 5 29 8.1E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01155 14585efd1204867396929c990fdbfea6 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01155 14585efd1204867396929c990fdbfea6 139 Gene3D G3DSA:3.30.700.10 7 66 3.8E-6 T 22-04-2016 VPUCM_RS01155 14585efd1204867396929c990fdbfea6 139 SUPERFAMILY SSF54523 7 93 6.36E-12 T 22-04-2016 VPUCM_RS15375 6eb79e1571b98f0ef1c080446bd2e065 447 Pfam PF01554 MatE 24 184 7.7E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS15375 6eb79e1571b98f0ef1c080446bd2e065 447 Pfam PF01554 MatE 250 405 2.4E-11 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS15375 6eb79e1571b98f0ef1c080446bd2e065 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 4.2E-74 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS15375 6eb79e1571b98f0ef1c080446bd2e065 447 PANTHER PTHR11206 10 442 5.3E-128 T 22-04-2016 VPUCM_RS15375 6eb79e1571b98f0ef1c080446bd2e065 447 PANTHER PTHR11206:SF94 10 442 5.3E-128 T 22-04-2016 VPUCM_RS08940 225a3f2a8f913791309e42e7acbaf3fc 474 Gene3D G3DSA:3.40.1160.10 126 306 8.0E-25 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS08940 225a3f2a8f913791309e42e7acbaf3fc 474 Gene3D G3DSA:3.40.1160.10 3 49 8.0E-25 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS08940 225a3f2a8f913791309e42e7acbaf3fc 474 SUPERFAMILY SSF55021 398 463 1.14E-8 T 22-04-2016 VPUCM_RS08940 225a3f2a8f913791309e42e7acbaf3fc 474 PANTHER PTHR21499 1 470 1.9E-74 T 22-04-2016 VPUCM_RS08940 225a3f2a8f913791309e42e7acbaf3fc 474 Pfam PF00696 Amino acid kinase family 4 293 7.2E-24 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS08940 225a3f2a8f913791309e42e7acbaf3fc 474 SUPERFAMILY SSF53633 5 306 1.33E-55 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VPUCM_RS08940 225a3f2a8f913791309e42e7acbaf3fc 474 PANTHER PTHR21499:SF3 1 470 1.9E-74 T 22-04-2016 VPUCM_RS13425 195a67186b661bd0f5a5c21e444814d9 209 PANTHER PTHR30086:SF0 1 209 3.1E-93 T 22-04-2016 VPUCM_RS13425 195a67186b661bd0f5a5c21e444814d9 209 PANTHER PTHR30086 1 209 3.1E-93 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS13425 195a67186b661bd0f5a5c21e444814d9 209 Pfam PF01810 LysE type translocator 15 202 2.7E-43 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VPUCM_RS06170 cd1b8158d40b45150bc79f69a60e27eb 217 Gene3D G3DSA:3.60.21.10 6 100 1.6E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS06170 cd1b8158d40b45150bc79f69a60e27eb 217 Gene3D G3DSA:3.60.21.10 148 186 1.6E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS06170 cd1b8158d40b45150bc79f69a60e27eb 217 PANTHER PTHR34990 1 217 6.9E-97 T 22-04-2016 VPUCM_RS06170 cd1b8158d40b45150bc79f69a60e27eb 217 SUPERFAMILY SSF56300 5 198 1.9E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS06170 cd1b8158d40b45150bc79f69a60e27eb 217 PANTHER PTHR34990:SF1 1 217 6.9E-97 T 22-04-2016 VPUCM_RS06170 cd1b8158d40b45150bc79f69a60e27eb 217 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 1 207 7.2E-91 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VPUCM_RS06170 cd1b8158d40b45150bc79f69a60e27eb 217 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 216 107.041 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VPUCM_RS04440 0dc54cbec1900848ded81b60270cafa4 219 Pfam PF12973 ChrR Cupin-like domain 127 193 7.8E-14 T 22-04-2016 IPR025979 ChrR-like cupin domain VPUCM_RS04440 0dc54cbec1900848ded81b60270cafa4 219 SUPERFAMILY SSF51182 113 203 2.17E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain VPUCM_RS04440 0dc54cbec1900848ded81b60270cafa4 219 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 216 1.2E-74 T 22-04-2016 IPR012807 Anti-sigma factor ChrR, putative VPUCM_RS04440 0dc54cbec1900848ded81b60270cafa4 219 Gene3D G3DSA:2.60.120.10 131 202 2.7E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS13535 b9c733cc32cf84337266bc1e6ea91e01 185 PANTHER PTHR33219:SF5 1 185 1.0E-84 T 22-04-2016 VPUCM_RS13535 b9c733cc32cf84337266bc1e6ea91e01 185 PANTHER PTHR33219 1 185 1.0E-84 T 22-04-2016 VPUCM_RS13535 b9c733cc32cf84337266bc1e6ea91e01 185 Pfam PF02325 YGGT family 109 173 1.3E-18 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 VPUCM_RS13535 b9c733cc32cf84337266bc1e6ea91e01 185 Pfam PF02325 YGGT family 10 77 1.6E-19 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 VPUCM_RS03365 f019e7982d442aec08b0239f7a90b76f 98 Gene3D G3DSA:3.30.110.60 1 95 1.7E-32 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VPUCM_RS03365 f019e7982d442aec08b0239f7a90b76f 98 PANTHER PTHR31846 1 98 4.6E-41 T 22-04-2016 VPUCM_RS03365 f019e7982d442aec08b0239f7a90b76f 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 VPUCM_RS03365 f019e7982d442aec08b0239f7a90b76f 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 7.6E-21 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VPUCM_RS03365 f019e7982d442aec08b0239f7a90b76f 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VPUCM_RS03365 f019e7982d442aec08b0239f7a90b76f 98 SMART SM01103 3 86 1.3E-41 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VPUCM_RS03365 f019e7982d442aec08b0239f7a90b76f 98 SUPERFAMILY SSF75471 1 94 5.89E-30 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VPUCM_RS00195 817eee763493e3e3c62538a310ce5e5c 83 PANTHER PTHR38040 2 82 1.0E-36 T 22-04-2016 VPUCM_RS00195 817eee763493e3e3c62538a310ce5e5c 83 PANTHER PTHR38040:SF1 2 82 1.0E-36 T 22-04-2016 VPUCM_RS00195 817eee763493e3e3c62538a310ce5e5c 83 Pfam PF04380 Membrane fusogenic activity 1 78 7.3E-28 T 22-04-2016 IPR007475 Membrane fusogenic activity VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 2.2E-43 T 22-04-2016 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 Gene3D G3DSA:3.40.190.10 131 267 8.6E-23 T 22-04-2016 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PANTHER PTHR30222:SF10 3 342 7.9E-170 T 22-04-2016 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PANTHER PTHR30222 3 342 7.9E-170 T 22-04-2016 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PIRSF PIRSF019574 1 345 1.0E-124 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 SUPERFAMILY SSF53850 24 341 8.89E-94 T 22-04-2016 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.5E-85 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 Gene3D G3DSA:3.40.190.10 268 311 1.6E-63 T 22-04-2016 VPUCM_RS08090 5862092cb434777179b93f9fa69be1f3 345 Gene3D G3DSA:3.40.190.10 23 129 1.6E-63 T 22-04-2016 VPUCM_RS02630 9910b4423364d1ba311997d06ee48353 321 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 2.1E-98 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VPUCM_RS02630 9910b4423364d1ba311997d06ee48353 321 Pfam PF02401 LytB protein 7 288 2.1E-92 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VPUCM_RS02630 9910b4423364d1ba311997d06ee48353 321 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 38.08 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VPUCM_RS02630 9910b4423364d1ba311997d06ee48353 321 PANTHER PTHR30426 5 317 5.0E-160 T 22-04-2016 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 SUPERFAMILY SSF51905 272 383 3.78E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 SUPERFAMILY SSF51905 3 175 3.78E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 Pfam PF01494 FAD binding domain 4 340 9.1E-24 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 PANTHER PTHR13789:SF233 3 391 3.2E-204 T 22-04-2016 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 2.6E-108 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 Gene3D G3DSA:3.50.50.60 273 356 8.2E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 Gene3D G3DSA:3.50.50.60 3 180 8.2E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 PANTHER PTHR13789 3 391 3.2E-204 T 22-04-2016 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.0E-17 T 22-04-2016 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.0E-17 T 22-04-2016 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 3.0E-17 T 22-04-2016 VPUCM_RS12440 051f3a605a4a1f81b4ac28b24f804e6a 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 3.0E-17 T 22-04-2016 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 SUPERFAMILY SSF56655 1 259 1.2E-83 T 22-04-2016 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 Pfam PF00459 Inositol monophosphatase family 2 254 3.9E-69 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PANTHER PTHR20854:SF4 1 260 6.3E-105 T 22-04-2016 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PANTHER PTHR20854 1 260 6.3E-105 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 Gene3D G3DSA:3.40.190.80 152 259 9.6E-39 T 22-04-2016 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 Gene3D G3DSA:3.30.540.10 2 151 3.7E-51 T 22-04-2016 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.7E-35 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.7E-35 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.7E-35 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.7E-35 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.5E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VPUCM_RS02930 71691356ad3829fdbd4ca21926c02b22 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VPUCM_RS09745 8bb094f9c2f6f0f4c760a0a4f7d91303 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 37 456 3.9E-56 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS09745 8bb094f9c2f6f0f4c760a0a4f7d91303 456 PANTHER PTHR10283:SF82 7 456 3.5E-129 T 22-04-2016 VPUCM_RS09745 8bb094f9c2f6f0f4c760a0a4f7d91303 456 PANTHER PTHR10283 7 456 3.5E-129 T 22-04-2016 VPUCM_RS09745 8bb094f9c2f6f0f4c760a0a4f7d91303 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 9.9E-109 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VPUCM_RS09745 8bb094f9c2f6f0f4c760a0a4f7d91303 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site VPUCM_RS03535 b6a7a436c58d1208323498e1a39c2bbf 468 Pfam PF00589 Phage integrase family 197 354 1.1E-8 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS03535 b6a7a436c58d1208323498e1a39c2bbf 468 SUPERFAMILY SSF56349 198 406 3.83E-17 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS03535 b6a7a436c58d1208323498e1a39c2bbf 468 Gene3D G3DSA:1.10.443.10 194 406 1.5E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS15760 13c22475922b76fec0851cc897e09071 80 PANTHER PTHR34472:SF1 12 80 9.1E-18 T 22-04-2016 VPUCM_RS15760 13c22475922b76fec0851cc897e09071 80 Gene3D G3DSA:3.10.20.30 15 80 1.3E-21 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS15760 13c22475922b76fec0851cc897e09071 80 Pfam PF02597 ThiS family 18 80 3.7E-13 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VPUCM_RS15760 13c22475922b76fec0851cc897e09071 80 SUPERFAMILY SSF54285 15 80 8.21E-15 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VPUCM_RS15760 13c22475922b76fec0851cc897e09071 80 PANTHER PTHR34472 12 80 9.1E-18 T 22-04-2016 VPUCM_RS15760 13c22475922b76fec0851cc897e09071 80 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 17 80 3.4E-17 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis VPUCM_RS08615 3ee6bf385c82e56400d1af516a5c5da2 256 Pfam PF01925 Sulfite exporter TauE/SafE 8 249 3.3E-37 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS08615 3ee6bf385c82e56400d1af516a5c5da2 256 PANTHER PTHR30269:SF10 1 252 6.7E-67 T 22-04-2016 VPUCM_RS08615 3ee6bf385c82e56400d1af516a5c5da2 256 PANTHER PTHR30269 1 252 6.7E-67 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS00995 aa8874e500bdb551c44fb2701a124e00 131 PANTHER PTHR34299 5 125 7.3E-38 T 22-04-2016 VPUCM_RS00995 aa8874e500bdb551c44fb2701a124e00 131 Gene3D G3DSA:1.10.3830.10 13 128 2.3E-43 T 22-04-2016 VPUCM_RS00995 aa8874e500bdb551c44fb2701a124e00 131 Pfam PF01219 Prokaryotic diacylglycerol kinase 24 125 4.8E-34 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VPUCM_RS00995 aa8874e500bdb551c44fb2701a124e00 131 PANTHER PTHR34299:SF1 5 125 7.3E-38 T 22-04-2016 VPUCM_RS00995 aa8874e500bdb551c44fb2701a124e00 131 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 78 89 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 SMART SM01329 7 356 3.4E-203 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 PANTHER PTHR11835 1 360 1.7E-208 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 Gene3D G3DSA:3.40.718.10 3 360 1.5E-133 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 9.1E-165 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 2.1E-136 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 SUPERFAMILY SSF53659 4 361 3.07E-123 T 22-04-2016 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 PANTHER PTHR11835:SF35 1 360 1.7E-208 T 22-04-2016 VPUCM_RS01840 f4b718b941839af733424524843b80fd 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.244 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VPUCM_RS00020 32d0f64e5f376d779b510eea79bc1bed 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 103 5.3E-28 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VPUCM_RS00020 32d0f64e5f376d779b510eea79bc1bed 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 1.0E-45 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VPUCM_RS00020 32d0f64e5f376d779b510eea79bc1bed 107 PANTHER PTHR33992 1 103 3.8E-35 T 22-04-2016 VPUCM_RS00020 32d0f64e5f376d779b510eea79bc1bed 107 SUPERFAMILY SSF54211 1 103 2.28E-28 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS00020 32d0f64e5f376d779b510eea79bc1bed 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 13.16 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VPUCM_RS00020 32d0f64e5f376d779b510eea79bc1bed 107 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 VPUCM_RS00020 32d0f64e5f376d779b510eea79bc1bed 107 Gene3D G3DSA:3.30.230.10 1 102 5.8E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS00020 32d0f64e5f376d779b510eea79bc1bed 107 Pfam PF00825 Ribonuclease P 1 101 5.3E-31 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VPUCM_RS06585 8170d4628cc02ecb3015a29bd82a9530 221 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 1.7E-61 T 22-04-2016 IPR021367 Protein of unknown function DUF2982 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 PIRSF PIRSF000437 19 808 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 Pfam PF01553 Acyltransferase 289 424 2.0E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.413 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 SMART SM00563 300 427 1.2E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 SUPERFAMILY SSF69593 241 490 2.09E-25 T 22-04-2016 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 PANTHER PTHR12563 144 774 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 PANTHER PTHR12563 1 118 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 PIRSF PIRSF500064 2 808 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 PANTHER PTHR12563:SF14 144 774 0.0 T 22-04-2016 VPUCM_RS15390 a2238e6a5262ed4e691e1336dfa31ae9 808 PANTHER PTHR12563:SF14 1 118 0.0 T 22-04-2016 VPUCM_RS15770 872411a95bea57f7a9dcab3a92f5b8c3 444 Gene3D G3DSA:3.20.20.70 224 430 7.8E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS15770 872411a95bea57f7a9dcab3a92f5b8c3 444 SUPERFAMILY SSF51391 225 429 1.27E-58 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VPUCM_RS15770 872411a95bea57f7a9dcab3a92f5b8c3 444 PANTHER PTHR20857 216 431 8.5E-56 T 22-04-2016 VPUCM_RS15770 872411a95bea57f7a9dcab3a92f5b8c3 444 Pfam PF02581 Thiamine monophosphate synthase/TENI 235 412 5.6E-51 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VPUCM_RS11080 beded363512931529777b905dc94eef2 75 SUPERFAMILY SSF158651 1 75 7.59E-29 T 22-04-2016 VPUCM_RS11080 beded363512931529777b905dc94eef2 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 7.0E-33 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VPUCM_RS11080 beded363512931529777b905dc94eef2 75 Gene3D G3DSA:1.10.3390.10 1 75 5.6E-33 T 22-04-2016 IPR023202 YejL-like domain VPUCM_RS11080 beded363512931529777b905dc94eef2 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.22 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VPUCM_RS11080 beded363512931529777b905dc94eef2 75 PIRSF PIRSF006188 1 72 7.5E-37 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VPUCM_RS11080 beded363512931529777b905dc94eef2 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 8.7E-19 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VPUCM_RS15455 2f7e05c6d74ba3cf48c4e9e3654767a8 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 2.6E-25 T 22-04-2016 IPR019620 Putative metal-binding protein VPUCM_RS15455 2f7e05c6d74ba3cf48c4e9e3654767a8 73 Pfam PF10678 Protein of unknown function (DUF2492) 3 72 4.3E-24 T 22-04-2016 IPR019620 Putative metal-binding protein VPUCM_RS00265 02ed99a27506b40e4784ccffe52abdca 517 Gene3D G3DSA:3.10.105.10 285 486 9.7E-55 T 22-04-2016 VPUCM_RS00265 02ed99a27506b40e4784ccffe52abdca 517 SUPERFAMILY SSF53850 26 516 3.62E-129 T 22-04-2016 VPUCM_RS00265 02ed99a27506b40e4784ccffe52abdca 517 Gene3D G3DSA:3.40.190.10 124 284 2.4E-40 T 22-04-2016 VPUCM_RS00265 02ed99a27506b40e4784ccffe52abdca 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 2.2E-86 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VPUCM_RS00265 02ed99a27506b40e4784ccffe52abdca 517 PANTHER PTHR30290:SF24 26 514 1.1E-180 T 22-04-2016 VPUCM_RS00265 02ed99a27506b40e4784ccffe52abdca 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site VPUCM_RS00265 02ed99a27506b40e4784ccffe52abdca 517 PANTHER PTHR30290 26 514 1.1E-180 T 22-04-2016 VPUCM_RS00265 02ed99a27506b40e4784ccffe52abdca 517 PIRSF PIRSF002741 21 512 3.2E-93 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VPUCM_RS11010 036d82cb29b663d3e81f3a2f852801da 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS11010 036d82cb29b663d3e81f3a2f852801da 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VPUCM_RS11010 036d82cb29b663d3e81f3a2f852801da 441 Pfam PF03553 Na+/H+ antiporter family 150 435 3.2E-75 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VPUCM_RS11010 036d82cb29b663d3e81f3a2f852801da 441 PANTHER PTHR37821 1 441 1.1E-191 T 22-04-2016 VPUCM_RS11010 036d82cb29b663d3e81f3a2f852801da 441 Pfam PF13726 Na+-H+ antiporter family 2 88 9.6E-36 T 22-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal VPUCM_RS07070 e4b80c7ca58d7ad5ca09735b64519575 234 SUPERFAMILY SSF81324 47 214 2.75E-14 T 22-04-2016 VPUCM_RS07070 e4b80c7ca58d7ad5ca09735b64519575 234 Pfam PF07885 Ion channel 139 216 8.7E-14 T 22-04-2016 IPR013099 Potassium channel domain VPUCM_RS07070 e4b80c7ca58d7ad5ca09735b64519575 234 Gene3D G3DSA:1.10.287.70 126 213 6.3E-13 T 22-04-2016 VPUCM_RS01850 1bc458f83a11f368116a8807fc5f4cb3 265 Pfam PF08239 Bacterial SH3 domain 132 184 1.1E-12 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type VPUCM_RS01860 7b61e08661193413721ec0bc72d04f21 348 Pfam PF13528 Glycosyl transferase family 1 1 300 1.8E-36 T 22-04-2016 VPUCM_RS01860 7b61e08661193413721ec0bc72d04f21 348 Gene3D G3DSA:3.40.50.2000 216 302 6.7E-5 T 22-04-2016 VPUCM_RS01860 7b61e08661193413721ec0bc72d04f21 348 SUPERFAMILY SSF53756 8 291 1.96E-12 T 22-04-2016 VPUCM_RS01860 7b61e08661193413721ec0bc72d04f21 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 4.3E-106 T 22-04-2016 IPR005262 Conserved hypothetical protein CHP00661 KEGG: 00540+2.4.-.- VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 Gene3D G3DSA:3.40.605.10 18 262 3.4E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 PANTHER PTHR11699 12 472 5.7E-255 T 22-04-2016 VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 Pfam PF00171 Aldehyde dehydrogenase family 18 469 1.2E-162 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 SUPERFAMILY SSF53720 18 473 1.09E-158 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 Gene3D G3DSA:3.40.309.10 263 445 2.3E-68 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 PANTHER PTHR11699:SF49 12 472 5.7E-255 T 22-04-2016 VPUCM_RS09195 195ad1624810454a128baee8137cb2bf 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 2.5E-198 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 VPUCM_RS16055 625359bdc1ecc30e97ba780b77e29dd9 257 Pfam PF13614 AAA domain 2 178 3.5E-62 T 22-04-2016 IPR025669 AAA domain VPUCM_RS16055 625359bdc1ecc30e97ba780b77e29dd9 257 SUPERFAMILY SSF52540 2 254 4.12E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS16055 625359bdc1ecc30e97ba780b77e29dd9 257 Gene3D G3DSA:3.40.50.300 3 254 3.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS16055 625359bdc1ecc30e97ba780b77e29dd9 257 PANTHER PTHR13696:SF52 2 254 3.2E-89 T 22-04-2016 VPUCM_RS16055 625359bdc1ecc30e97ba780b77e29dd9 257 PANTHER PTHR13696 2 254 3.2E-89 T 22-04-2016 VPUCM_RS21235 daf41b75d4bdbe9819a9a704b3dc429c 292 Gene3D G3DSA:3.40.50.300 3 137 1.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS21235 daf41b75d4bdbe9819a9a704b3dc429c 292 Pfam PF05621 Bacterial TniB protein 5 244 1.2E-15 T 22-04-2016 IPR008868 Bacterial TniB VPUCM_RS21235 daf41b75d4bdbe9819a9a704b3dc429c 292 SUPERFAMILY SSF52540 3 253 1.06E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12855 384b2c423003d59241a33eace1fd2a92 579 Gene3D G3DSA:2.60.40.10 5 91 8.1E-15 T 22-04-2016 IPR013783 Immunoglobulin-like fold VPUCM_RS12855 384b2c423003d59241a33eace1fd2a92 579 SUPERFAMILY SSF81296 2 90 2.87E-14 T 22-04-2016 IPR014756 Immunoglobulin E-set VPUCM_RS12855 384b2c423003d59241a33eace1fd2a92 579 Pfam PF00759 Glycosyl hydrolase family 9 98 500 1.2E-23 T 22-04-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VPUCM_RS12855 384b2c423003d59241a33eace1fd2a92 579 SUPERFAMILY SSF48208 85 565 7.23E-92 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VPUCM_RS12855 384b2c423003d59241a33eace1fd2a92 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 7.7E-10 T 22-04-2016 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VPUCM_RS12855 384b2c423003d59241a33eace1fd2a92 579 Gene3D G3DSA:1.50.10.10 97 562 3.6E-70 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VPUCM_RS10260 b6deb273db9b8f08548eefb58819503a 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 7.5E-38 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VPUCM_RS10260 b6deb273db9b8f08548eefb58819503a 342 Gene3D G3DSA:3.20.20.210 2 341 6.9E-92 T 22-04-2016 VPUCM_RS10260 b6deb273db9b8f08548eefb58819503a 342 SUPERFAMILY SSF51726 3 338 5.1E-70 T 22-04-2016 VPUCM_RS10260 b6deb273db9b8f08548eefb58819503a 342 PIRSF PIRSF005632 1 342 1.1E-194 T 22-04-2016 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VPUCM_RS10260 b6deb273db9b8f08548eefb58819503a 342 PANTHER PTHR30519 235 342 1.6E-103 T 22-04-2016 VPUCM_RS10260 b6deb273db9b8f08548eefb58819503a 342 PANTHER PTHR30519 4 216 1.6E-103 T 22-04-2016 VPUCM_RS01355 5a1aea90dc4069a5542a26dea1ce4e63 115 SUPERFAMILY SSF55331 2 115 9.01E-33 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily VPUCM_RS01355 5a1aea90dc4069a5542a26dea1ce4e63 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 3.2E-6 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 VPUCM_RS01355 5a1aea90dc4069a5542a26dea1ce4e63 115 PANTHER PTHR37950 2 115 2.0E-36 T 22-04-2016 VPUCM_RS01355 5a1aea90dc4069a5542a26dea1ce4e63 115 PANTHER PTHR37950:SF1 2 115 2.0E-36 T 22-04-2016 VPUCM_RS01355 5a1aea90dc4069a5542a26dea1ce4e63 115 Gene3D G3DSA:3.30.429.10 1 115 7.8E-38 T 22-04-2016 VPUCM_RS05615 61cfcb42a8cf4301aea22f1e6b26c57c 906 SMART SM01276 453 776 1.1E-42 T 22-04-2016 IPR031161 Peptidase family M60 domain VPUCM_RS05615 61cfcb42a8cf4301aea22f1e6b26c57c 906 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 443 854 2.3E-13 T 22-04-2016 IPR031161 Peptidase family M60 domain VPUCM_RS19555 f96d348f0719c80f45ed4c344f4882aa 273 Gene3D G3DSA:1.10.443.10 68 236 9.9E-9 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS19555 f96d348f0719c80f45ed4c344f4882aa 273 SUPERFAMILY SSF56349 66 237 3.24E-11 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS10115 de1da0cb9dbc05c8160eee52bdbcfdf9 309 Gene3D G3DSA:3.40.50.1820 26 308 1.7E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS10115 de1da0cb9dbc05c8160eee52bdbcfdf9 309 Pfam PF00561 alpha/beta hydrolase fold 33 186 1.3E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS10115 de1da0cb9dbc05c8160eee52bdbcfdf9 309 PANTHER PTHR11440 27 142 1.9E-16 T 22-04-2016 VPUCM_RS10115 de1da0cb9dbc05c8160eee52bdbcfdf9 309 SUPERFAMILY SSF53474 28 305 8.25E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 SUPERFAMILY SSF52402 5 247 1.15E-56 T 22-04-2016 VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 Gene3D G3DSA:3.40.50.620 4 214 5.8E-98 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 2.8E-152 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.88 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 Pfam PF03054 tRNA methyl transferase 7 365 3.5E-142 T 22-04-2016 VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 Gene3D G3DSA:2.30.30.280 216 285 1.5E-29 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 Gene3D G3DSA:2.40.30.10 288 370 1.4E-33 T 22-04-2016 VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 PANTHER PTHR11933:SF10 1 370 1.9E-214 T 22-04-2016 VPUCM_RS06085 baa21cbc25168e7811ddb11443cc921a 374 PANTHER PTHR11933 1 370 1.9E-214 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VPUCM_RS12015 ddd795176409811f4ecd020662a37ac9 527 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 160 479 2.6E-97 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE VPUCM_RS12015 ddd795176409811f4ecd020662a37ac9 527 Pfam PF10995 GGDEF I-site like or GIL domain 166 478 3.4E-100 T 22-04-2016 IPR017745 Cellulose biosynthesis protein BcsE VPUCM_RS01655 379823a116e7274555fdd24553044992 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 1.0E-75 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VPUCM_RS01655 379823a116e7274555fdd24553044992 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 8.1E-88 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VPUCM_RS01655 379823a116e7274555fdd24553044992 183 Gene3D G3DSA:3.40.30.10 114 176 3.5E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS00335 ba28bbb5ab8a43ee000a299d782848fe 174 Gene3D G3DSA:3.40.50.300 3 165 8.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00335 ba28bbb5ab8a43ee000a299d782848fe 174 SUPERFAMILY SSF52540 4 160 1.24E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS00335 ba28bbb5ab8a43ee000a299d782848fe 174 Pfam PF01202 Shikimate kinase 13 141 7.6E-14 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VPUCM_RS00335 ba28bbb5ab8a43ee000a299d782848fe 174 PANTHER PTHR11603 6 171 6.4E-82 T 22-04-2016 VPUCM_RS00335 ba28bbb5ab8a43ee000a299d782848fe 174 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 162 8.7E-64 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 VPUCM_RS13725 f43297f640dc964f31e03f8e552c4053 444 PANTHER PTHR33989:SF4 3 443 1.4E-184 T 22-04-2016 VPUCM_RS13725 f43297f640dc964f31e03f8e552c4053 444 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 424 2.2E-112 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VPUCM_RS13725 f43297f640dc964f31e03f8e552c4053 444 PIRSF PIRSF006351 4 435 5.8E-146 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VPUCM_RS13725 f43297f640dc964f31e03f8e552c4053 444 Pfam PF02378 Phosphotransferase system, EIIC 32 351 3.5E-64 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VPUCM_RS13725 f43297f640dc964f31e03f8e552c4053 444 PANTHER PTHR33989 3 443 1.4E-184 T 22-04-2016 VPUCM_RS24160 9a7841cb4048cee0dc666a9bd7e0cf8f 148 SUPERFAMILY SSF52200 15 122 8.89E-14 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VPUCM_RS24160 9a7841cb4048cee0dc666a9bd7e0cf8f 148 Gene3D G3DSA:3.40.50.10140 17 109 1.9E-10 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VPUCM_RS24160 9a7841cb4048cee0dc666a9bd7e0cf8f 148 Pfam PF13676 TIR domain 19 111 1.5E-13 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 VPUCM_RS15635 8fd64bffe73b355ab1b22e408368a148 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VPUCM_RS15635 8fd64bffe73b355ab1b22e408368a148 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 78 7.2E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS15635 8fd64bffe73b355ab1b22e408368a148 89 SUPERFAMILY SSF54292 2 87 8.39E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VPUCM_RS15635 8fd64bffe73b355ab1b22e408368a148 89 Gene3D G3DSA:3.10.20.30 2 86 6.6E-25 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 PANTHER PTHR34933 1 256 9.7E-116 T 22-04-2016 VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 Pfam PF02107 Flagellar L-ring protein 80 257 2.3E-56 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.546 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 PANTHER PTHR34933:SF2 1 256 9.7E-116 T 22-04-2016 VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VPUCM_RS12115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 6.6E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VPUCM_RS07660 bfe15ba2dd7e14d7b80bd87227462e8f 200 PANTHER PTHR23029:SF1 1 195 5.3E-37 T 22-04-2016 VPUCM_RS07660 bfe15ba2dd7e14d7b80bd87227462e8f 200 Gene3D G3DSA:3.40.50.1240 1 194 6.3E-48 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VPUCM_RS07660 bfe15ba2dd7e14d7b80bd87227462e8f 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 9.1E-37 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VPUCM_RS07660 bfe15ba2dd7e14d7b80bd87227462e8f 200 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 VPUCM_RS07660 bfe15ba2dd7e14d7b80bd87227462e8f 200 SUPERFAMILY SSF53254 1 186 1.05E-45 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VPUCM_RS07660 bfe15ba2dd7e14d7b80bd87227462e8f 200 PIRSF PIRSF000709 1 191 4.1E-15 T 22-04-2016 VPUCM_RS07660 bfe15ba2dd7e14d7b80bd87227462e8f 200 SMART SM00855 4 158 4.1E-19 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VPUCM_RS07660 bfe15ba2dd7e14d7b80bd87227462e8f 200 PANTHER PTHR23029 1 195 5.3E-37 T 22-04-2016 VPUCM_RS13480 461c66d24af026d1942db38c3445ba7a 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 1.4E-27 T 22-04-2016 IPR018692 Predicted integral membrane protein DUF2189 VPUCM_RS06220 0a0d4410d59eabfb4d0304949644f8b7 180 Pfam PF00857 Isochorismatase family 7 155 3.9E-30 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS06220 0a0d4410d59eabfb4d0304949644f8b7 180 Gene3D G3DSA:3.40.50.850 2 180 2.0E-53 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS06220 0a0d4410d59eabfb4d0304949644f8b7 180 PANTHER PTHR14119 1 180 9.2E-49 T 22-04-2016 VPUCM_RS06220 0a0d4410d59eabfb4d0304949644f8b7 180 SUPERFAMILY SSF52499 1 180 3.92E-46 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 SUPERFAMILY SSF46785 1 83 8.74E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 SUPERFAMILY SSF53850 89 287 1.18E-37 T 22-04-2016 VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 PANTHER PTHR30537:SF19 1 290 5.6E-159 T 22-04-2016 VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:3.40.190.10 177 257 2.8E-15 T 22-04-2016 VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 Pfam PF03466 LysR substrate binding domain 88 286 1.3E-39 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:1.10.10.10 1 82 6.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.2E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 PANTHER PTHR30537 1 290 5.6E-159 T 22-04-2016 VPUCM_RS11280 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:3.40.190.10 91 176 1.7E-21 T 22-04-2016 VPUCM_RS08660 134fa9ababd33b4059e902dcd96852fa 114 Gene3D G3DSA:1.25.40.10 5 106 8.7E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS08660 134fa9ababd33b4059e902dcd96852fa 114 Pfam PF14559 Tetratricopeptide repeat 19 78 3.6E-10 T 22-04-2016 VPUCM_RS08660 134fa9ababd33b4059e902dcd96852fa 114 SUPERFAMILY SSF48452 5 111 3.2E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS08660 134fa9ababd33b4059e902dcd96852fa 114 PIRSF PIRSF017117 1 112 2.4E-43 T 22-04-2016 IPR016684 Type III secretion system chaperone, YscY VPUCM_RS05775 e9b88c4f2a8740b0711c1f1dd3b39f8a 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 2.8E-36 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VPUCM_RS05775 e9b88c4f2a8740b0711c1f1dd3b39f8a 189 SUPERFAMILY SSF101327 2 176 6.02E-34 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VPUCM_RS05775 e9b88c4f2a8740b0711c1f1dd3b39f8a 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 2 174 7.1E-56 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VPUCM_RS03625 3fd3cb6cf15b0c2c990ee61b93280c24 320 Pfam PF13280 WYL domain 146 268 2.5E-14 T 22-04-2016 IPR026881 WYL domain VPUCM_RS03625 3fd3cb6cf15b0c2c990ee61b93280c24 320 PIRSF PIRSF015558 27 313 2.2E-101 T 22-04-2016 IPR016634 Transcription regulator, DeoR type, predicted VPUCM_RS10995 f6052482c0bd65097e9bdc0a4aff783f 144 Gene3D G3DSA:1.25.40.10 8 106 6.1E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS10995 f6052482c0bd65097e9bdc0a4aff783f 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 2.7E-76 T 22-04-2016 IPR020206 Uncharacterised protein family, VP2110 VPUCM_RS10995 f6052482c0bd65097e9bdc0a4aff783f 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 3.0E-72 T 22-04-2016 IPR020206 Uncharacterised protein family, VP2110 VPUCM_RS07810 8910979244f9d1c98af602a9dbb48278 176 SUPERFAMILY SSF53098 4 175 1.1E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS07810 8910979244f9d1c98af602a9dbb48278 176 PANTHER PTHR23044:SF5 1 176 2.5E-58 T 22-04-2016 VPUCM_RS07810 8910979244f9d1c98af602a9dbb48278 176 PANTHER PTHR23044 1 176 2.5E-58 T 22-04-2016 VPUCM_RS07810 8910979244f9d1c98af602a9dbb48278 176 SMART SM00479 5 176 6.9E-5 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS07810 8910979244f9d1c98af602a9dbb48278 176 Pfam PF00929 Exonuclease 7 171 5.5E-12 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VPUCM_RS07810 8910979244f9d1c98af602a9dbb48278 176 Gene3D G3DSA:3.30.420.10 3 176 2.0E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS07685 3b090dfb8f4974ef4ed76ac87d374e7f 157 SMART SM00448 4 125 1.1E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS07685 3b090dfb8f4974ef4ed76ac87d374e7f 157 Gene3D G3DSA:3.40.50.2300 5 131 7.0E-23 T 22-04-2016 VPUCM_RS07685 3b090dfb8f4974ef4ed76ac87d374e7f 157 PANTHER PTHR26402 4 134 2.4E-57 T 22-04-2016 VPUCM_RS07685 3b090dfb8f4974ef4ed76ac87d374e7f 157 SUPERFAMILY SSF52172 2 132 1.31E-20 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS07685 3b090dfb8f4974ef4ed76ac87d374e7f 157 PANTHER PTHR26402:SF515 4 134 2.4E-57 T 22-04-2016 VPUCM_RS07685 3b090dfb8f4974ef4ed76ac87d374e7f 157 Pfam PF00072 Response regulator receiver domain 7 125 5.1E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS20915 148b8f500eeb28af5ae4e4c774d05359 247 PANTHER PTHR10859 3 198 5.1E-62 T 22-04-2016 VPUCM_RS20915 148b8f500eeb28af5ae4e4c774d05359 247 Pfam PF00535 Glycosyl transferase family 2 3 73 5.7E-7 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS20915 148b8f500eeb28af5ae4e4c774d05359 247 SUPERFAMILY SSF53448 3 183 6.84E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS20915 148b8f500eeb28af5ae4e4c774d05359 247 PANTHER PTHR10859:SF84 3 198 5.1E-62 T 22-04-2016 VPUCM_RS04430 3b1e88619a7e9f51c55e24ecadedb534 111 Pfam PF14344 Domain of unknown function (DUF4397) 9 105 2.8E-6 T 22-04-2016 IPR025510 Domain of unknown function DUF4397 VPUCM_RS11510 140947e3a88ad4ecea619298cd74719c 122 Pfam PF00072 Response regulator receiver domain 3 115 1.7E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS11510 140947e3a88ad4ecea619298cd74719c 122 Gene3D G3DSA:3.40.50.2300 1 121 2.7E-39 T 22-04-2016 VPUCM_RS11510 140947e3a88ad4ecea619298cd74719c 122 SUPERFAMILY SSF52172 1 121 9.25E-38 T 22-04-2016 IPR011006 CheY-like superfamily VPUCM_RS11510 140947e3a88ad4ecea619298cd74719c 122 SMART SM00448 1 115 1.6E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VPUCM_RS11510 140947e3a88ad4ecea619298cd74719c 122 PANTHER PTHR26402 1 121 2.8E-43 T 22-04-2016 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 PRINTS PR01009 Flagellar M-ring protein signature 296 314 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 PRINTS PR01009 Flagellar M-ring protein signature 151 169 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 PRINTS PR01009 Flagellar M-ring protein signature 183 197 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 PRINTS PR01009 Flagellar M-ring protein signature 376 400 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 PRINTS PR01009 Flagellar M-ring protein signature 226 244 2.1E-22 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 Pfam PF01514 Secretory protein of YscJ/FliF family 64 250 2.9E-54 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 PANTHER PTHR30046 31 582 4.6E-186 T 22-04-2016 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 PIRSF PIRSF004862 29 582 1.2E-162 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 Pfam PF08345 Flagellar M-ring protein C-terminal 283 453 2.6E-38 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 PANTHER PTHR30046:SF0 31 582 4.6E-186 T 22-04-2016 VPUCM_RS11600 5319fadf8ccfeb24aa7f6085b697e151 582 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 55 581 2.4E-72 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VPUCM_RS15995 ba05515a7e8f2ce20dad1fca59d632fd 246 SUPERFAMILY SSF161098 41 227 1.44E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS15995 ba05515a7e8f2ce20dad1fca59d632fd 246 PANTHER PTHR30614 6 246 2.0E-81 T 22-04-2016 VPUCM_RS15995 ba05515a7e8f2ce20dad1fca59d632fd 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 6.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS15995 ba05515a7e8f2ce20dad1fca59d632fd 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 4.6E-29 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VPUCM_RS15995 ba05515a7e8f2ce20dad1fca59d632fd 246 Gene3D G3DSA:1.10.3720.10 41 241 2.5E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS15995 ba05515a7e8f2ce20dad1fca59d632fd 246 PANTHER PTHR30614:SF0 6 246 2.0E-81 T 22-04-2016 VPUCM_RS11700 996c442513bc0629ade129cb2598ab92 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 1.0E-21 T 22-04-2016 IPR021550 Protein of unknown function DUF2897 VPUCM_RS13235 05fd66ca045f300a387e3c8686a56332 307 PANTHER PTHR21666:SF222 189 307 6.1E-55 T 22-04-2016 VPUCM_RS13235 05fd66ca045f300a387e3c8686a56332 307 SUPERFAMILY SSF51261 48 306 2.82E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif VPUCM_RS13235 05fd66ca045f300a387e3c8686a56332 307 Gene3D G3DSA:2.70.70.10 170 306 5.1E-41 T 22-04-2016 VPUCM_RS13235 05fd66ca045f300a387e3c8686a56332 307 Pfam PF01551 Peptidase family M23 208 302 5.6E-31 T 22-04-2016 IPR016047 Peptidase M23 VPUCM_RS13235 05fd66ca045f300a387e3c8686a56332 307 SMART SM00257 48 92 1.5E-11 T 22-04-2016 IPR018392 LysM domain VPUCM_RS13235 05fd66ca045f300a387e3c8686a56332 307 Pfam PF01476 LysM domain 49 91 2.0E-10 T 22-04-2016 IPR018392 LysM domain VPUCM_RS13235 05fd66ca045f300a387e3c8686a56332 307 Gene3D G3DSA:3.10.350.10 47 92 1.2E-13 T 22-04-2016 IPR018392 LysM domain VPUCM_RS13235 05fd66ca045f300a387e3c8686a56332 307 PANTHER PTHR21666 189 307 6.1E-55 T 22-04-2016 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.054 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PANTHER PTHR21060:SF15 1 395 1.1E-271 T 22-04-2016 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 Gene3D G3DSA:3.30.420.40 87 203 1.9E-8 T 22-04-2016 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 SUPERFAMILY SSF53067 3 195 7.77E-66 T 22-04-2016 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 SUPERFAMILY SSF53067 156 395 1.76E-85 T 22-04-2016 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PANTHER PTHR21060 1 395 1.1E-271 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 Pfam PF00871 Acetokinase family 5 390 1.5E-168 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PIRSF PIRSF000722 1 397 6.9E-149 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.5E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 3.1E-174 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 VPUCM_RS05715 f0bbc3b14eb171a0dc8f7434e4484968 398 Gene3D G3DSA:3.30.420.40 204 395 7.5E-77 T 22-04-2016 VPUCM_RS12285 9c667ce7d27ec7c3d62b6439620802ad 127 PIRSF PIRSF005610 1 121 1.3E-19 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VPUCM_RS12285 9c667ce7d27ec7c3d62b6439620802ad 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 2.7E-39 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VPUCM_RS12285 9c667ce7d27ec7c3d62b6439620802ad 127 PANTHER PTHR39594 1 127 3.0E-41 T 22-04-2016 VPUCM_RS01025 ddeeb686d6e67b1181bf6d5acac0e49b 396 PANTHER PTHR10366 34 254 4.1E-23 T 22-04-2016 VPUCM_RS01025 ddeeb686d6e67b1181bf6d5acac0e49b 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 282 1.5E-44 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VPUCM_RS01025 ddeeb686d6e67b1181bf6d5acac0e49b 396 SUPERFAMILY SSF51735 34 308 3.49E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01025 ddeeb686d6e67b1181bf6d5acac0e49b 396 Gene3D G3DSA:3.40.50.720 33 243 5.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS01025 ddeeb686d6e67b1181bf6d5acac0e49b 396 PANTHER PTHR10366:SF256 34 254 4.1E-23 T 22-04-2016 VPUCM_RS03800 8b606a55d41da800fda49fe5d5f25e97 338 SUPERFAMILY SSF52980 1 199 2.14E-49 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS03800 8b606a55d41da800fda49fe5d5f25e97 338 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 5 158 3.9E-42 T 22-04-2016 IPR017482 Putative phage-type endonuclease VPUCM_RS03800 8b606a55d41da800fda49fe5d5f25e97 338 Pfam PF09588 YqaJ-like viral recombinase domain 13 147 3.6E-20 T 22-04-2016 IPR019080 YqaJ viral recombinase VPUCM_RS03800 8b606a55d41da800fda49fe5d5f25e97 338 Gene3D G3DSA:3.90.320.10 1 199 2.6E-41 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 VPUCM_RS03720 16fece33f44973631a3e17a3b9f67158 306 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 37 280 3.8E-33 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system VPUCM_RS06030 93fcbbdb08635ceb4d7003ecc464ee14 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.007 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VPUCM_RS06030 93fcbbdb08635ceb4d7003ecc464ee14 287 Gene3D G3DSA:3.30.2010.10 73 160 1.5E-32 T 22-04-2016 VPUCM_RS06030 93fcbbdb08635ceb4d7003ecc464ee14 287 Pfam PF01435 Peptidase family M48 78 286 9.6E-40 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VPUCM_RS06030 93fcbbdb08635ceb4d7003ecc464ee14 287 PANTHER PTHR10120 1 286 2.4E-100 T 22-04-2016 VPUCM_RS06030 93fcbbdb08635ceb4d7003ecc464ee14 287 PANTHER PTHR10120:SF19 1 286 2.4E-100 T 22-04-2016 VPUCM_RS15565 7b4ad50aa2ae2daeec2217314aa1ee15 234 PANTHER PTHR38765 1 226 2.0E-74 T 22-04-2016 VPUCM_RS15565 7b4ad50aa2ae2daeec2217314aa1ee15 234 Pfam PF04340 Protein of unknown function, DUF484 6 216 1.3E-68 T 22-04-2016 IPR007435 Protein of unknown function DUF484 VPUCM_RS10220 9f657ac1a0e1a4621841f78ed9ef2748 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 6 55 4.0E-24 T 22-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VPUCM_RS10220 9f657ac1a0e1a4621841f78ed9ef2748 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 5.6E-28 T 22-04-2016 IPR014316 Trimethylamine N-oxide reductase system, TorE VPUCM_RS06900 0585a8067aff0326e19a564434f35df4 145 PANTHER PTHR23091 1 133 8.1E-15 T 22-04-2016 VPUCM_RS06900 0585a8067aff0326e19a564434f35df4 145 SUPERFAMILY SSF55729 2 133 2.27E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06900 0585a8067aff0326e19a564434f35df4 145 Pfam PF00583 Acetyltransferase (GNAT) family 55 130 7.4E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS06900 0585a8067aff0326e19a564434f35df4 145 Gene3D G3DSA:3.40.630.30 1 133 5.0E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS04720 8e91cf9caabc149702b2207d1b1f94d3 103 PRINTS PR00605 Class IC cytochrome C signature 32 43 8.5E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VPUCM_RS04720 8e91cf9caabc149702b2207d1b1f94d3 103 PRINTS PR00605 Class IC cytochrome C signature 77 99 8.5E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VPUCM_RS04720 8e91cf9caabc149702b2207d1b1f94d3 103 SUPERFAMILY SSF46626 11 102 3.01E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS04720 8e91cf9caabc149702b2207d1b1f94d3 103 Pfam PF00034 Cytochrome c 27 103 2.1E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS04720 8e91cf9caabc149702b2207d1b1f94d3 103 PANTHER PTHR33751 3 103 6.8E-27 T 22-04-2016 VPUCM_RS04720 8e91cf9caabc149702b2207d1b1f94d3 103 Gene3D G3DSA:1.10.760.10 12 103 2.1E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10285 045d27cebd62af58f673a461be71eff6 427 Pfam PF02687 FtsX-like permease family 296 420 1.7E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VPUCM_RS10285 045d27cebd62af58f673a461be71eff6 427 PANTHER PTHR30572 5 427 1.3E-65 T 22-04-2016 VPUCM_RS10285 045d27cebd62af58f673a461be71eff6 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 4.0E-27 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VPUCM_RS07800 224a9e1e4238cb7e119dcc21fe3b2554 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 2.0E-54 T 22-04-2016 IPR021212 Domain of unknown function DUF2760 VPUCM_RS21445 99820f96fc5b38f74df8e81d0ce8da1e 204 Gene3D G3DSA:3.30.2060.10 3 66 3.0E-14 T 22-04-2016 VPUCM_RS21445 99820f96fc5b38f74df8e81d0ce8da1e 204 SUPERFAMILY SSF52540 2 201 2.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 SUPERFAMILY SSF55920 303 559 1.31E-55 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.1E-34 T 22-04-2016 VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 Pfam PF00557 Metallopeptidase family M24 309 523 6.2E-43 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 PANTHER PTHR10804 8 180 3.7E-234 T 22-04-2016 VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 PANTHER PTHR10804 282 591 3.7E-234 T 22-04-2016 VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 1.7E-23 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 PANTHER PTHR10804:SF105 8 180 3.7E-234 T 22-04-2016 VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 PANTHER PTHR10804:SF105 282 591 3.7E-234 T 22-04-2016 VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 Gene3D G3DSA:3.40.350.10 4 129 1.4E-21 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 Gene3D G3DSA:3.90.230.10 301 559 1.3E-58 T 22-04-2016 IPR000994 Peptidase M24, structural domain VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 133 1.2E-18 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 VPUCM_RS15745 f771b99168de8e1f7b00b10604041c09 596 SUPERFAMILY SSF53092 7 130 2.27E-19 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 Gene3D G3DSA:3.40.190.10 123 207 1.3E-6 T 22-04-2016 VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 SUPERFAMILY SSF53850 1 256 2.44E-50 T 22-04-2016 VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 SMART SM00062 33 257 2.3E-38 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 Gene3D G3DSA:3.40.190.10 30 119 4.9E-28 T 22-04-2016 VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 Gene3D G3DSA:3.40.190.10 216 255 4.9E-28 T 22-04-2016 VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 PANTHER PTHR18966 21 253 6.0E-27 T 22-04-2016 VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 2.3E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VPUCM_RS15990 b0157d2d599402fbefc668a077f98f83 258 PANTHER PTHR18966:SF243 21 253 6.0E-27 T 22-04-2016 VPUCM_RS05500 ec8a7fe0bbae2e7484566832eb9663cf 402 PANTHER PTHR30489 1 402 1.1E-202 T 22-04-2016 VPUCM_RS05500 ec8a7fe0bbae2e7484566832eb9663cf 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 4.7E-134 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VPUCM_RS05500 ec8a7fe0bbae2e7484566832eb9663cf 402 PANTHER PTHR30489:SF8 1 402 1.1E-202 T 22-04-2016 VPUCM_RS05500 ec8a7fe0bbae2e7484566832eb9663cf 402 Pfam PF12704 MacB-like periplasmic core domain 29 208 6.6E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VPUCM_RS05500 ec8a7fe0bbae2e7484566832eb9663cf 402 Pfam PF02687 FtsX-like permease family 271 395 2.0E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VPUCM_RS07695 61998721c30f4e6179a02a9483be76ce 403 Gene3D G3DSA:1.10.3210.10 161 296 7.9E-18 T 22-04-2016 IPR006674 HD domain VPUCM_RS07695 61998721c30f4e6179a02a9483be76ce 403 SMART SM00471 161 297 2.9E-9 T 22-04-2016 IPR003607 HD/PDEase domain VPUCM_RS07695 61998721c30f4e6179a02a9483be76ce 403 SUPERFAMILY SSF109604 156 327 2.42E-32 T 22-04-2016 VPUCM_RS07695 61998721c30f4e6179a02a9483be76ce 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 3.2E-18 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 VPUCM_RS07695 61998721c30f4e6179a02a9483be76ce 403 Pfam PF01966 HD domain 166 287 1.0E-13 T 22-04-2016 IPR006674 HD domain VPUCM_RS03025 21a091ee225e923a1f38d8692c2a5b99 293 SUPERFAMILY SSF55186 121 272 5.23E-15 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VPUCM_RS08610 d4d283de2557f4259fea848f1dfc339c 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 6.7E-141 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane VPUCM_RS08610 d4d283de2557f4259fea848f1dfc339c 508 PANTHER PTHR35342 1 498 5.8E-290 T 22-04-2016 VPUCM_RS08610 d4d283de2557f4259fea848f1dfc339c 508 PANTHER PTHR35342:SF2 1 498 5.8E-290 T 22-04-2016 VPUCM_RS03380 6410219e495a87d75f2ee19b99e8d578 276 PANTHER PTHR20941 1 275 2.9E-125 T 22-04-2016 VPUCM_RS03380 6410219e495a87d75f2ee19b99e8d578 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VPUCM_RS03380 6410219e495a87d75f2ee19b99e8d578 276 Pfam PF00809 Pterin binding enzyme 18 257 7.0E-90 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VPUCM_RS03380 6410219e495a87d75f2ee19b99e8d578 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 2.3E-102 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 VPUCM_RS03380 6410219e495a87d75f2ee19b99e8d578 276 PANTHER PTHR20941:SF1 1 275 2.9E-125 T 22-04-2016 VPUCM_RS03380 6410219e495a87d75f2ee19b99e8d578 276 Gene3D G3DSA:3.20.20.20 12 274 4.4E-109 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VPUCM_RS03380 6410219e495a87d75f2ee19b99e8d578 276 SUPERFAMILY SSF51717 2 274 2.75E-104 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VPUCM_RS03380 6410219e495a87d75f2ee19b99e8d578 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VPUCM_RS03515 c93239c67b31e7506d205d517440c7f6 324 SUPERFAMILY SSF53067 168 323 1.01E-17 T 22-04-2016 VPUCM_RS03515 c93239c67b31e7506d205d517440c7f6 324 SUPERFAMILY SSF53067 1 161 8.2E-32 T 22-04-2016 VPUCM_RS03515 c93239c67b31e7506d205d517440c7f6 324 Gene3D G3DSA:3.30.420.40 4 179 6.7E-12 T 22-04-2016 VPUCM_RS12505 59058841b048ab62cccd5d80935ae505 373 Pfam PF01098 Cell cycle protein 23 367 1.9E-113 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VPUCM_RS12505 59058841b048ab62cccd5d80935ae505 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VPUCM_RS12505 59058841b048ab62cccd5d80935ae505 373 PANTHER PTHR30474 1 371 3.0E-175 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VPUCM_RS12505 59058841b048ab62cccd5d80935ae505 373 PANTHER PTHR30474:SF1 1 371 3.0E-175 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VPUCM_RS12505 59058841b048ab62cccd5d80935ae505 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 4.1E-135 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VPUCM_RS05225 950e8447808fdad7d67603b1266a5a1a 196 PANTHER PTHR30055 1 196 8.8E-83 T 22-04-2016 VPUCM_RS05225 950e8447808fdad7d67603b1266a5a1a 196 PANTHER PTHR30055:SF85 1 196 8.8E-83 T 22-04-2016 VPUCM_RS05225 950e8447808fdad7d67603b1266a5a1a 196 SUPERFAMILY SSF46689 4 77 5.82E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS05225 950e8447808fdad7d67603b1266a5a1a 196 SUPERFAMILY SSF48498 82 195 3.0E-19 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VPUCM_RS05225 950e8447808fdad7d67603b1266a5a1a 196 Gene3D G3DSA:1.10.357.10 2 193 5.3E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VPUCM_RS05225 950e8447808fdad7d67603b1266a5a1a 196 Pfam PF13305 WHG domain 93 172 5.0E-10 T 22-04-2016 IPR025996 WHG domain VPUCM_RS10050 9d1951f053479b9aaef3bede47aafeb5 569 PANTHER PTHR30183:SF6 35 551 3.0E-171 T 22-04-2016 VPUCM_RS10050 9d1951f053479b9aaef3bede47aafeb5 569 SUPERFAMILY SSF161098 5 276 3.92E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10050 9d1951f053479b9aaef3bede47aafeb5 569 PANTHER PTHR30183 35 551 3.0E-171 T 22-04-2016 VPUCM_RS10050 9d1951f053479b9aaef3bede47aafeb5 569 SUPERFAMILY SSF161098 300 541 2.62E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10050 9d1951f053479b9aaef3bede47aafeb5 569 Gene3D G3DSA:1.10.3720.10 302 545 7.6E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10050 9d1951f053479b9aaef3bede47aafeb5 569 Gene3D G3DSA:1.10.3720.10 4 278 1.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS11075 56c32bb2bb05a42029aa24a357715e54 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.645 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VPUCM_RS11075 56c32bb2bb05a42029aa24a357715e54 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 6.1E-100 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VPUCM_RS11075 56c32bb2bb05a42029aa24a357715e54 332 PANTHER PTHR38772 2 331 2.1E-167 T 22-04-2016 VPUCM_RS03935 9479fb54cbd139bc5689109be5456798 109 Pfam PF13591 MerR HTH family regulatory protein 22 102 2.7E-22 T 22-04-2016 VPUCM_RS06190 39e41035f9e194a083c0b2488c67f727 141 Gene3D G3DSA:3.30.70.1290 7 130 3.9E-43 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VPUCM_RS06190 39e41035f9e194a083c0b2488c67f727 141 SUPERFAMILY SSF143422 7 128 1.83E-40 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VPUCM_RS06190 39e41035f9e194a083c0b2488c67f727 141 PANTHER PTHR33360:SF2 1 137 6.5E-55 T 22-04-2016 VPUCM_RS06190 39e41035f9e194a083c0b2488c67f727 141 SMART SM01321 8 127 2.7E-39 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VPUCM_RS06190 39e41035f9e194a083c0b2488c67f727 141 Pfam PF01797 Transposase IS200 like 9 127 1.1E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VPUCM_RS06190 39e41035f9e194a083c0b2488c67f727 141 PANTHER PTHR33360 1 137 6.5E-55 T 22-04-2016 VPUCM_RS14480 9926671780bf2d4cf6522b5b08e7709a 62 PANTHER PTHR37424:SF1 2 59 2.3E-17 T 22-04-2016 VPUCM_RS14480 9926671780bf2d4cf6522b5b08e7709a 62 PANTHER PTHR37424 2 59 2.3E-17 T 22-04-2016 VPUCM_RS14480 9926671780bf2d4cf6522b5b08e7709a 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.4E-13 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain VPUCM_RS00825 31b6dfdeff52eba56df1887a51c23424 135 PANTHER PTHR30558 1 135 3.2E-33 T 22-04-2016 VPUCM_RS00825 31b6dfdeff52eba56df1887a51c23424 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 2.7E-32 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VPUCM_RS00825 31b6dfdeff52eba56df1887a51c23424 135 PANTHER PTHR30558:SF3 1 135 3.2E-33 T 22-04-2016 VPUCM_RS09525 dc7832f57375d4cd38aaadc4bfa679f4 124 Pfam PF03788 LrgA family 25 115 1.9E-24 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 VPUCM_RS09525 dc7832f57375d4cd38aaadc4bfa679f4 124 PANTHER PTHR33931 1 123 5.7E-31 T 22-04-2016 VPUCM_RS09525 dc7832f57375d4cd38aaadc4bfa679f4 124 PANTHER PTHR33931:SF2 1 123 5.7E-31 T 22-04-2016 VPUCM_RS09525 dc7832f57375d4cd38aaadc4bfa679f4 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.866 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 VPUCM_RS09235 d383398ed12033f1911c148f049d8297 491 PANTHER PTHR33451 44 491 2.0E-109 T 22-04-2016 VPUCM_RS09235 d383398ed12033f1911c148f049d8297 491 PANTHER PTHR33451:SF7 44 491 2.0E-109 T 22-04-2016 VPUCM_RS09235 d383398ed12033f1911c148f049d8297 491 Pfam PF03553 Na+/H+ antiporter family 223 491 1.8E-29 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VPUCM_RS01075 e04ed5b5779e801fa7e372e850f681f2 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 313 5.1E-106 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VPUCM_RS01075 e04ed5b5779e801fa7e372e850f681f2 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 48.123 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VPUCM_RS01075 e04ed5b5779e801fa7e372e850f681f2 329 PANTHER PTHR30606:SF4 12 329 1.4E-125 T 22-04-2016 VPUCM_RS01075 e04ed5b5779e801fa7e372e850f681f2 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 5.8E-74 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS01075 e04ed5b5779e801fa7e372e850f681f2 329 PANTHER PTHR30606 12 329 1.4E-125 T 22-04-2016 VPUCM_RS01075 e04ed5b5779e801fa7e372e850f681f2 329 PIRSF PIRSF026649 12 314 2.3E-79 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VPUCM_RS14670 ee9568479a083c373f404a27701cb661 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 9.1E-24 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 VPUCM_RS14670 ee9568479a083c373f404a27701cb661 61 PANTHER PTHR38602:SF1 1 61 5.2E-20 T 22-04-2016 VPUCM_RS14670 ee9568479a083c373f404a27701cb661 61 PANTHER PTHR38602 1 61 5.2E-20 T 22-04-2016 VPUCM_RS07900 af2761a3fc87288d3e735e3788acf544 372 PANTHER PTHR12526 70 365 2.3E-48 T 22-04-2016 VPUCM_RS07900 af2761a3fc87288d3e735e3788acf544 372 PANTHER PTHR12526 11 53 2.3E-48 T 22-04-2016 VPUCM_RS07900 af2761a3fc87288d3e735e3788acf544 372 Pfam PF13439 Glycosyltransferase Family 4 26 184 2.5E-19 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VPUCM_RS07900 af2761a3fc87288d3e735e3788acf544 372 Pfam PF00534 Glycosyl transferases group 1 190 341 1.5E-35 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS07900 af2761a3fc87288d3e735e3788acf544 372 Gene3D G3DSA:3.40.50.2000 173 339 1.1E-30 T 22-04-2016 VPUCM_RS07900 af2761a3fc87288d3e735e3788acf544 372 SUPERFAMILY SSF53756 15 365 1.88E-71 T 22-04-2016 VPUCM_RS02060 164b65346284465e4807dd91770565fb 227 Pfam PF16537 Type II secretion system protein B 162 221 2.9E-24 T 22-04-2016 IPR032389 Type II secretion system protein B VPUCM_RS07815 751e0c2e5900ee84de4d91dfb41faef5 146 Pfam PF05099 Tellurite resistance protein TerB 11 143 1.6E-37 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VPUCM_RS07815 751e0c2e5900ee84de4d91dfb41faef5 146 Gene3D G3DSA:1.10.3680.10 3 142 5.1E-22 T 22-04-2016 IPR029024 TerB-like VPUCM_RS07815 751e0c2e5900ee84de4d91dfb41faef5 146 SUPERFAMILY SSF158682 2 144 1.12E-27 T 22-04-2016 IPR029024 TerB-like VPUCM_RS02975 f14fb03099df745256208bf077cd3c39 64 PIRSF PIRSF039003 1 64 2.9E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VPUCM_RS02975 f14fb03099df745256208bf077cd3c39 64 SUPERFAMILY SSF140319 1 62 3.4E-29 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VPUCM_RS02975 f14fb03099df745256208bf077cd3c39 64 PANTHER PTHR37532:SF1 1 64 3.5E-32 T 22-04-2016 VPUCM_RS02975 f14fb03099df745256208bf077cd3c39 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.8E-36 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VPUCM_RS02975 f14fb03099df745256208bf077cd3c39 64 PANTHER PTHR37532 1 64 3.5E-32 T 22-04-2016 VPUCM_RS02975 f14fb03099df745256208bf077cd3c39 64 Gene3D G3DSA:1.10.10.600 1 64 1.3E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VPUCM_RS02975 f14fb03099df745256208bf077cd3c39 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 7.8E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VPUCM_RS09225 8ee21bf5be296db6da85bd012d94036e 248 Gene3D G3DSA:3.40.50.880 5 247 6.6E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS09225 8ee21bf5be296db6da85bd012d94036e 248 Pfam PF07722 Peptidase C26 7 226 4.9E-70 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 VPUCM_RS09225 8ee21bf5be296db6da85bd012d94036e 248 PANTHER PTHR11922:SF18 28 248 5.9E-49 T 22-04-2016 VPUCM_RS09225 8ee21bf5be296db6da85bd012d94036e 248 SUPERFAMILY SSF52317 5 246 1.1E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VPUCM_RS09225 8ee21bf5be296db6da85bd012d94036e 248 PANTHER PTHR11922 28 248 5.9E-49 T 22-04-2016 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.0E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 PANTHER PTHR30465:SF65 171 314 7.8E-152 T 22-04-2016 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 PANTHER PTHR30465:SF65 1 146 7.8E-152 T 22-04-2016 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 Gene3D G3DSA:1.10.3720.10 71 140 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 Gene3D G3DSA:1.10.3720.10 180 306 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 SUPERFAMILY SSF161098 69 137 1.18E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 SUPERFAMILY SSF161098 177 298 1.18E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 PANTHER PTHR30465 171 314 7.8E-152 T 22-04-2016 VPUCM_RS10170 14969c5bd594a9abc5da7c9d6cbb065d 320 PANTHER PTHR30465 1 146 7.8E-152 T 22-04-2016 VPUCM_RS06000 340dbb77eee790e627bed4a2f87a2fc4 88 PANTHER PTHR38777 2 88 1.9E-23 T 22-04-2016 VPUCM_RS06000 340dbb77eee790e627bed4a2f87a2fc4 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 1.8E-13 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VPUCM_RS06000 340dbb77eee790e627bed4a2f87a2fc4 88 SUPERFAMILY SSF57716 38 71 5.13E-7 T 22-04-2016 VPUCM_RS06000 340dbb77eee790e627bed4a2f87a2fc4 88 PANTHER PTHR38777:SF1 2 88 1.9E-23 T 22-04-2016 VPUCM_RS10265 a33a05289be7f34e4a89ccbb1c22dc96 324 PIRSF PIRSF034367 1 324 1.7E-197 T 22-04-2016 IPR015004 Protein of unknown function DUF1852 VPUCM_RS10265 a33a05289be7f34e4a89ccbb1c22dc96 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 1.1E-185 T 22-04-2016 IPR015004 Protein of unknown function DUF1852 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PRINTS PR00143 Citrate synthase signature 203 231 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PRINTS PR00143 Citrate synthase signature 130 143 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PRINTS PR00143 Citrate synthase signature 333 347 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PRINTS PR00143 Citrate synthase signature 313 329 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PRINTS PR00143 Citrate synthase signature 181 196 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PRINTS PR00143 Citrate synthase signature 256 276 1.3E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PANTHER PTHR11739:SF4 15 380 2.1E-148 T 22-04-2016 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 SUPERFAMILY SSF48256 14 380 6.41E-123 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PANTHER PTHR11739 15 380 2.1E-148 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 7.2E-160 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 Gene3D G3DSA:1.10.580.10 21 242 2.3E-73 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.2E-111 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 PIRSF PIRSF001369 8 380 1.2E-115 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VPUCM_RS08580 f821c53b56521bb9627c8ca048982b2a 380 Gene3D G3DSA:1.10.230.10 243 327 1.4E-30 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.6E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 22-04-2016 IPR011032 GroES-like VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 1.5E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS14935 1aacc99d68a55f38a625f224dca7cfba 96 PANTHER PTHR10772 1 96 1.0E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VPUCM_RS06975 bea5b88446be6c7a485c59f2d8916ef2 173 SUPERFAMILY SSF55729 10 134 2.27E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06975 bea5b88446be6c7a485c59f2d8916ef2 173 Pfam PF13527 Acetyltransferase (GNAT) domain 21 123 7.4E-8 T 22-04-2016 VPUCM_RS06975 bea5b88446be6c7a485c59f2d8916ef2 173 Gene3D G3DSA:3.40.630.30 9 125 3.9E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10455 e293a118f0e9e48c17e1f0e944fb48d6 226 PANTHER PTHR21299 6 225 3.5E-80 T 22-04-2016 VPUCM_RS10455 e293a118f0e9e48c17e1f0e944fb48d6 226 Pfam PF02224 Cytidylate kinase 8 221 3.8E-78 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VPUCM_RS10455 e293a118f0e9e48c17e1f0e944fb48d6 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.458 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VPUCM_RS10455 e293a118f0e9e48c17e1f0e944fb48d6 226 Gene3D G3DSA:3.40.50.300 5 221 2.0E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10455 e293a118f0e9e48c17e1f0e944fb48d6 226 SUPERFAMILY SSF52540 6 223 1.86E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10455 e293a118f0e9e48c17e1f0e944fb48d6 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 3.5E-85 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VPUCM_RS02565 ab6afa3288c68b3f768509d6de9af831 263 PANTHER PTHR30269 1 263 7.4E-116 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS02565 ab6afa3288c68b3f768509d6de9af831 263 PANTHER PTHR30269:SF18 1 263 7.4E-116 T 22-04-2016 VPUCM_RS02565 ab6afa3288c68b3f768509d6de9af831 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 9.8E-51 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS03030 f6f5f9c30adf03e1bd85e7665dcb68f9 74 Pfam PF07191 zinc-ribbons 5 68 6.2E-27 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 VPUCM_RS03030 f6f5f9c30adf03e1bd85e7665dcb68f9 74 SUPERFAMILY SSF161187 3 70 1.31E-26 T 22-04-2016 IPR029037 YfgJ-like VPUCM_RS03030 f6f5f9c30adf03e1bd85e7665dcb68f9 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 2.0E-31 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 VPUCM_RS03030 f6f5f9c30adf03e1bd85e7665dcb68f9 74 Gene3D G3DSA:2.10.290.10 3 71 8.1E-29 T 22-04-2016 IPR029037 YfgJ-like VPUCM_RS05720 3f97c8832b3f74a36d2f213d785d5f16 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 36.052 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 VPUCM_RS05720 3f97c8832b3f74a36d2f213d785d5f16 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 4.4E-58 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 VPUCM_RS02370 96ef4e72182097b7da6a9010896cbb8d 142 PIRSF PIRSF026426 1 142 7.9E-50 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 VPUCM_RS02370 96ef4e72182097b7da6a9010896cbb8d 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 135 2.3E-25 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 VPUCM_RS02370 96ef4e72182097b7da6a9010896cbb8d 142 PANTHER PTHR34801:SF2 14 138 7.2E-35 T 22-04-2016 VPUCM_RS02370 96ef4e72182097b7da6a9010896cbb8d 142 PANTHER PTHR34801 14 138 7.2E-35 T 22-04-2016 VPUCM_RS03180 64fb03ab60efa66573a13865c066be4c 279 PANTHER PTHR37418 9 278 2.5E-23 T 22-04-2016 VPUCM_RS03180 64fb03ab60efa66573a13865c066be4c 279 Gene3D G3DSA:3.20.20.70 9 279 4.7E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS03180 64fb03ab60efa66573a13865c066be4c 279 Pfam PF05853 beta-keto acid cleavage enzyme 11 279 4.2E-58 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 VPUCM_RS03035 f170e4a2c57aff2cdd75ccfd5998b98d 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.237 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VPUCM_RS03035 f170e4a2c57aff2cdd75ccfd5998b98d 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 3.9E-103 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VPUCM_RS03035 f170e4a2c57aff2cdd75ccfd5998b98d 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 356 2.5E-134 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VPUCM_RS03035 f170e4a2c57aff2cdd75ccfd5998b98d 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 8.1E-30 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VPUCM_RS03035 f170e4a2c57aff2cdd75ccfd5998b98d 443 PANTHER PTHR30008:SF0 2 442 7.5E-185 T 22-04-2016 VPUCM_RS03035 f170e4a2c57aff2cdd75ccfd5998b98d 443 PANTHER PTHR30008 2 442 7.5E-185 T 22-04-2016 VPUCM_RS08815 af4151240f4816032ff8e89888972162 433 SUPERFAMILY SSF49879 4 92 8.7E-5 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 VPUCM_RS08815 af4151240f4816032ff8e89888972162 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 6.1E-129 T 22-04-2016 IPR012843 Type III secretion system YscD/HrpQ VPUCM_RS08815 af4151240f4816032ff8e89888972162 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 8.7E-128 T 22-04-2016 IPR032034 Yop protein translocation protein D, periplasmic domain VPUCM_RS08815 af4151240f4816032ff8e89888972162 433 Gene3D G3DSA:2.60.200.20 3 96 7.8E-7 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 VPUCM_RS08815 af4151240f4816032ff8e89888972162 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 7.3E-20 T 22-04-2016 IPR032030 YscD, cytoplasmic domain VPUCM_RS09295 0bf4e18071beadec45c2c8bf7023a66c 219 PIRSF PIRSF028063 1 219 1.1E-142 T 22-04-2016 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VPUCM_RS09295 0bf4e18071beadec45c2c8bf7023a66c 219 Gene3D G3DSA:3.30.65.10 174 212 4.8E-5 T 22-04-2016 VPUCM_RS09295 0bf4e18071beadec45c2c8bf7023a66c 219 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 1.6E-34 T 22-04-2016 IPR024402 Domain of unknown function DUF2726 VPUCM_RS02660 372b9f8685bfc9c6072a6ca5f58a5f74 308 Gene3D G3DSA:3.40.50.10490 11 256 1.5E-89 T 22-04-2016 VPUCM_RS02660 372b9f8685bfc9c6072a6ca5f58a5f74 308 PANTHER PTHR10088:SF5 1 305 5.6E-199 T 22-04-2016 VPUCM_RS02660 372b9f8685bfc9c6072a6ca5f58a5f74 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.111 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VPUCM_RS02660 372b9f8685bfc9c6072a6ca5f58a5f74 308 PANTHER PTHR10088 1 305 5.6E-199 T 22-04-2016 VPUCM_RS02660 372b9f8685bfc9c6072a6ca5f58a5f74 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 5.2E-131 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VPUCM_RS02660 372b9f8685bfc9c6072a6ca5f58a5f74 308 Pfam PF13580 SIS domain 49 172 2.4E-10 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VPUCM_RS02660 372b9f8685bfc9c6072a6ca5f58a5f74 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VPUCM_RS02660 372b9f8685bfc9c6072a6ca5f58a5f74 308 SUPERFAMILY SSF53697 12 256 2.07E-74 T 22-04-2016 VPUCM_RS08980 151e838636cedc33ddb4b3f1dfb48f1c 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 314 3.9E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08980 151e838636cedc33ddb4b3f1dfb48f1c 361 SUPERFAMILY SSF161098 136 318 3.92E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08980 151e838636cedc33ddb4b3f1dfb48f1c 361 Gene3D G3DSA:1.10.3720.10 133 319 2.0E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS08980 151e838636cedc33ddb4b3f1dfb48f1c 361 PANTHER PTHR30177:SF2 54 347 4.3E-130 T 22-04-2016 VPUCM_RS08980 151e838636cedc33ddb4b3f1dfb48f1c 361 PANTHER PTHR30177 54 347 4.3E-130 T 22-04-2016 VPUCM_RS07895 448cdca7e862c7ff7022a2997782aef6 397 Gene3D G3DSA:3.90.550.10 59 291 8.5E-19 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS07895 448cdca7e862c7ff7022a2997782aef6 397 Pfam PF13641 Glycosyltransferase like family 2 59 279 8.0E-21 T 22-04-2016 VPUCM_RS07895 448cdca7e862c7ff7022a2997782aef6 397 SUPERFAMILY SSF53448 49 327 3.47E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS07895 448cdca7e862c7ff7022a2997782aef6 397 PANTHER PTHR10587:SF94 55 185 3.1E-14 T 22-04-2016 VPUCM_RS07895 448cdca7e862c7ff7022a2997782aef6 397 PANTHER PTHR10587 55 185 3.1E-14 T 22-04-2016 VPUCM_RS02150 817b5bdb89ce9db6e0bf271de9de5a39 147 PANTHER PTHR39579 1 138 2.1E-47 T 22-04-2016 VPUCM_RS02150 817b5bdb89ce9db6e0bf271de9de5a39 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 2.1E-47 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 VPUCM_RS02150 817b5bdb89ce9db6e0bf271de9de5a39 147 PIRSF PIRSF006318 1 136 2.6E-57 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 VPUCM_RS01390 6950a5837dae6fc055af7b2698601bfc 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.75 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VPUCM_RS01390 6950a5837dae6fc055af7b2698601bfc 305 PANTHER PTHR13929:SF0 3 295 6.8E-83 T 22-04-2016 VPUCM_RS01390 6950a5837dae6fc055af7b2698601bfc 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 1.3E-98 T 22-04-2016 VPUCM_RS01390 6950a5837dae6fc055af7b2698601bfc 305 PIRSF PIRSF005355 1 303 6.5E-85 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 VPUCM_RS01390 6950a5837dae6fc055af7b2698601bfc 305 PANTHER PTHR13929 3 295 6.8E-83 T 22-04-2016 VPUCM_RS01390 6950a5837dae6fc055af7b2698601bfc 305 Pfam PF01040 UbiA prenyltransferase family 21 271 2.0E-39 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VPUCM_RS11990 7b1301bdfba07912e3f1664469c973ab 368 Gene3D G3DSA:1.50.10.10 8 357 1.2E-87 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VPUCM_RS11990 7b1301bdfba07912e3f1664469c973ab 368 Pfam PF01270 Glycosyl hydrolases family 8 11 348 1.2E-65 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VPUCM_RS11990 7b1301bdfba07912e3f1664469c973ab 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 49 62 1.2E-14 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VPUCM_RS11990 7b1301bdfba07912e3f1664469c973ab 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 238 247 1.2E-14 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VPUCM_RS11990 7b1301bdfba07912e3f1664469c973ab 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 334 348 1.2E-14 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VPUCM_RS11990 7b1301bdfba07912e3f1664469c973ab 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 214 225 1.2E-14 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VPUCM_RS11990 7b1301bdfba07912e3f1664469c973ab 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 111 129 1.2E-14 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VPUCM_RS11990 7b1301bdfba07912e3f1664469c973ab 368 SUPERFAMILY SSF48208 4 354 4.81E-95 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VPUCM_RS04610 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 Pfam PF00849 RNA pseudouridylate synthase 24 183 1.2E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS04610 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 PANTHER PTHR11079:SF60 10 252 5.3E-87 T 22-04-2016 VPUCM_RS04610 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS04610 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 SUPERFAMILY SSF55120 9 252 2.72E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VPUCM_RS04610 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 PANTHER PTHR11079 10 252 5.3E-87 T 22-04-2016 VPUCM_RS15175 614920a95c3bed3315f8ddaa978eaa81 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 4.3E-78 T 22-04-2016 IPR007338 Protein of unknown function DUF416 VPUCM_RS15175 614920a95c3bed3315f8ddaa978eaa81 195 Gene3D G3DSA:1.20.1590.10 1 195 6.7E-86 T 22-04-2016 IPR023381 YP001051499.1-like domain VPUCM_RS17385 10baddb21b8fd90f54e6dd1f7833a485 261 SUPERFAMILY SSF53448 189 256 1.93E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS17385 10baddb21b8fd90f54e6dd1f7833a485 261 Gene3D G3DSA:3.90.550.10 1 144 2.9E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS17385 10baddb21b8fd90f54e6dd1f7833a485 261 Gene3D G3DSA:3.90.550.10 190 240 6.1E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS17385 10baddb21b8fd90f54e6dd1f7833a485 261 PANTHER PTHR22916:SF3 1 163 1.0E-19 T 22-04-2016 VPUCM_RS17385 10baddb21b8fd90f54e6dd1f7833a485 261 PANTHER PTHR22916 1 163 1.0E-19 T 22-04-2016 VPUCM_RS17385 10baddb21b8fd90f54e6dd1f7833a485 261 Pfam PF00535 Glycosyl transferase family 2 194 239 2.3E-6 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS17385 10baddb21b8fd90f54e6dd1f7833a485 261 Pfam PF00535 Glycosyl transferase family 2 1 92 4.1E-9 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS17385 10baddb21b8fd90f54e6dd1f7833a485 261 SUPERFAMILY SSF53448 1 145 1.85E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS09670 9fa371466a03b245f48decdfe583a6d9 153 PANTHER PTHR12714:SF7 8 153 2.3E-16 T 22-04-2016 VPUCM_RS09670 9fa371466a03b245f48decdfe583a6d9 153 PANTHER PTHR12714 8 153 2.3E-16 T 22-04-2016 VPUCM_RS09670 9fa371466a03b245f48decdfe583a6d9 153 Pfam PF04191 Phospholipid methyltransferase 40 142 1.5E-12 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 VPUCM_RS09670 9fa371466a03b245f48decdfe583a6d9 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 5.0E-20 T 22-04-2016 VPUCM_RS04000 68e740842ee833a60160ae8cf505aaea 177 SUPERFAMILY SSF160930 5 163 2.48E-34 T 22-04-2016 VPUCM_RS04000 68e740842ee833a60160ae8cf505aaea 177 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 5 163 9.0E-10 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 VPUCM_RS04000 68e740842ee833a60160ae8cf505aaea 177 Pfam PF05280 Flagellar transcriptional activator (FlhC) 11 167 1.0E-16 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 VPUCM_RS03445 c85062bba532f858e0d97b6d5e59597b 306 PIRSF PIRSF004654 1 296 1.0E-90 T 22-04-2016 IPR023605 Lipoprotein NlpI VPUCM_RS03445 c85062bba532f858e0d97b6d5e59597b 306 SUPERFAMILY SSF48452 34 286 2.8E-68 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS03445 c85062bba532f858e0d97b6d5e59597b 306 SMART SM00028 134 167 280.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS03445 c85062bba532f858e0d97b6d5e59597b 306 SMART SM00028 66 99 0.057 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS03445 c85062bba532f858e0d97b6d5e59597b 306 SMART SM00028 100 133 0.0059 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS03445 c85062bba532f858e0d97b6d5e59597b 306 SMART SM00028 238 271 45.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS03445 c85062bba532f858e0d97b6d5e59597b 306 PANTHER PTHR23083 48 291 2.5E-21 T 22-04-2016 VPUCM_RS03445 c85062bba532f858e0d97b6d5e59597b 306 Gene3D G3DSA:1.25.40.10 49 293 2.1E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS06760 1c01769bd3e099e1e5137e55c8ba32c6 195 Pfam PF13023 HD domain 15 173 2.0E-51 T 22-04-2016 IPR006674 HD domain VPUCM_RS06760 1c01769bd3e099e1e5137e55c8ba32c6 195 SUPERFAMILY SSF109604 4 182 7.85E-42 T 22-04-2016 VPUCM_RS06760 1c01769bd3e099e1e5137e55c8ba32c6 195 Gene3D G3DSA:1.10.3210.10 2 187 1.1E-36 T 22-04-2016 IPR006674 HD domain VPUCM_RS06760 1c01769bd3e099e1e5137e55c8ba32c6 195 PANTHER PTHR11845 2 142 6.1E-22 T 22-04-2016 VPUCM_RS14695 2326f2cf9926c36e83cc25a6d8cdfb65 310 Gene3D G3DSA:1.10.287.890 203 285 2.0E-34 T 22-04-2016 VPUCM_RS14695 2326f2cf9926c36e83cc25a6d8cdfb65 310 Pfam PF01715 IPP transferase 42 287 9.2E-87 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VPUCM_RS14695 2326f2cf9926c36e83cc25a6d8cdfb65 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.269 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VPUCM_RS14695 2326f2cf9926c36e83cc25a6d8cdfb65 310 Gene3D G3DSA:3.40.50.300 8 174 2.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS14695 2326f2cf9926c36e83cc25a6d8cdfb65 310 PANTHER PTHR11088 6 294 2.7E-120 T 22-04-2016 VPUCM_RS14695 2326f2cf9926c36e83cc25a6d8cdfb65 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 294 3.1E-116 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VPUCM_RS14695 2326f2cf9926c36e83cc25a6d8cdfb65 310 SUPERFAMILY SSF52540 10 153 6.67E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03215 ebd21fe3a68fdf127bfb9ae7cc80f135 154 Gene3D G3DSA:2.60.40.10 12 62 1.5E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold VPUCM_RS15485 3b96be60d35d1abef2573eb057f6f10a 337 PANTHER PTHR40074 1 327 4.1E-12 T 22-04-2016 VPUCM_RS15485 3b96be60d35d1abef2573eb057f6f10a 337 Pfam PF01757 Acyltransferase family 7 326 2.3E-29 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 VPUCM_RS10060 6cbbcbc5cdc71f79c470aff313ace178 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VPUCM_RS10060 6cbbcbc5cdc71f79c470aff313ace178 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 1.8E-8 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VPUCM_RS07250 ef80e981927adabd3d5069f8131cf2ce 105 Pfam PF01845 CcdB protein 3 104 5.9E-35 T 22-04-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 VPUCM_RS07250 ef80e981927adabd3d5069f8131cf2ce 105 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 18 104 6.0E-38 T 22-04-2016 IPR002712 Toxin CcdB GO:0006276|GO:0008657 VPUCM_RS07250 ef80e981927adabd3d5069f8131cf2ce 105 Gene3D G3DSA:2.30.30.110 3 105 7.1E-38 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor VPUCM_RS07250 ef80e981927adabd3d5069f8131cf2ce 105 SUPERFAMILY SSF50118 3 105 9.48E-32 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor VPUCM_RS04375 343041c1f1c19bb91a7ae914a67eef1a 151 Pfam PF11012 Protein of unknown function (DUF2850) 65 142 1.4E-30 T 22-04-2016 IPR021271 Protein of unknown function DUF2850 VPUCM_RS20455 0aa12bec10f7d03ec61ae9969040d2ea 93 Pfam PF02508 Rnf-Nqr subunit, membrane protein 1 93 1.8E-24 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VPUCM_RS20455 0aa12bec10f7d03ec61ae9969040d2ea 93 PANTHER PTHR30586:SF1 1 93 1.6E-57 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VPUCM_RS20455 0aa12bec10f7d03ec61ae9969040d2ea 93 PANTHER PTHR30586 1 93 1.6E-57 T 22-04-2016 VPUCM_RS15010 5c97abe1aef16cda845385b6f3aa277f 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 2.3E-35 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted VPUCM_RS15010 5c97abe1aef16cda845385b6f3aa277f 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.1E-33 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted VPUCM_RS07425 432eefeec59027df129efe194f5827f4 306 PANTHER PTHR34631:SF2 3 306 1.1E-189 T 22-04-2016 VPUCM_RS07425 432eefeec59027df129efe194f5827f4 306 PANTHER PTHR34631 3 306 1.1E-189 T 22-04-2016 VPUCM_RS07425 432eefeec59027df129efe194f5827f4 306 Pfam PF13737 Transposase DDE domain 19 129 7.6E-45 T 22-04-2016 IPR025668 Transposase DDE domain VPUCM_RS24170 4ad4d18542c546df8acd5e7ac5108c0c 241 SUPERFAMILY SSF52980 2 113 4.34E-18 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VPUCM_RS24170 4ad4d18542c546df8acd5e7ac5108c0c 241 Gene3D G3DSA:3.40.1350.10 2 117 2.3E-19 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VPUCM_RS24170 4ad4d18542c546df8acd5e7ac5108c0c 241 Pfam PF04471 Restriction endonuclease 2 112 1.8E-15 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 VPUCM_RS11580 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 PANTHER PTHR38786 1 147 1.7E-37 T 22-04-2016 VPUCM_RS11580 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 Pfam PF02050 Flagellar FliJ protein 17 140 2.8E-30 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VPUCM_RS11580 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.0E-39 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 Gene3D G3DSA:1.10.3720.10 31 77 1.6E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 Gene3D G3DSA:1.10.3720.10 172 415 1.6E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 412 9.9E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 SUPERFAMILY SSF161098 37 63 1.57E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 SUPERFAMILY SSF161098 170 416 1.57E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 PANTHER PTHR30193 185 425 3.0E-130 T 22-04-2016 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 PANTHER PTHR30193 13 81 3.0E-130 T 22-04-2016 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 PANTHER PTHR30193:SF8 185 425 3.0E-130 T 22-04-2016 VPUCM_RS09375 3a292753a6da7aef2c025f0ad383d6c7 426 PANTHER PTHR30193:SF8 13 81 3.0E-130 T 22-04-2016 VPUCM_RS00465 6a60ca96286543274ba0be77d8536135 170 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 45 154 1.5E-8 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III VPUCM_RS04445 95b32fade125251c5bcfa73903b4295c 450 Pfam PF07690 Major Facilitator Superfamily 24 397 7.1E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VPUCM_RS04445 95b32fade125251c5bcfa73903b4295c 450 SUPERFAMILY SSF103473 11 436 1.05E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain VPUCM_RS04445 95b32fade125251c5bcfa73903b4295c 450 PANTHER PTHR12778 20 436 5.1E-91 T 22-04-2016 VPUCM_RS04445 95b32fade125251c5bcfa73903b4295c 450 Gene3D G3DSA:1.20.1250.20 256 436 3.3E-15 T 22-04-2016 VPUCM_RS04445 95b32fade125251c5bcfa73903b4295c 450 Gene3D G3DSA:1.20.1250.20 18 224 3.4E-16 T 22-04-2016 VPUCM_RS11695 b530ac163442225fe72f86f09d8fd1d9 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 178 1.9E-37 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VPUCM_RS11695 b530ac163442225fe72f86f09d8fd1d9 233 SUPERFAMILY SSF55166 19 175 6.28E-20 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VPUCM_RS11695 b530ac163442225fe72f86f09d8fd1d9 233 PANTHER PTHR34385:SF1 88 224 1.8E-46 T 22-04-2016 VPUCM_RS11695 b530ac163442225fe72f86f09d8fd1d9 233 PANTHER PTHR34385:SF1 1 69 1.8E-46 T 22-04-2016 VPUCM_RS11695 b530ac163442225fe72f86f09d8fd1d9 233 PANTHER PTHR34385 88 224 1.8E-46 T 22-04-2016 VPUCM_RS11695 b530ac163442225fe72f86f09d8fd1d9 233 PANTHER PTHR34385 1 69 1.8E-46 T 22-04-2016 VPUCM_RS14010 6b3a7a95985b3c88d9b168f4d18e970f 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 23.06 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VPUCM_RS14010 6b3a7a95985b3c88d9b168f4d18e970f 175 PANTHER PTHR38101 1 174 2.9E-75 T 22-04-2016 VPUCM_RS14010 6b3a7a95985b3c88d9b168f4d18e970f 175 Gene3D G3DSA:1.10.60.30 28 102 4.5E-33 T 22-04-2016 IPR023153 PSPTO4464-like domain VPUCM_RS14010 6b3a7a95985b3c88d9b168f4d18e970f 175 PANTHER PTHR38101:SF1 1 174 2.9E-75 T 22-04-2016 VPUCM_RS14010 6b3a7a95985b3c88d9b168f4d18e970f 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 3.7E-56 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VPUCM_RS14010 6b3a7a95985b3c88d9b168f4d18e970f 175 SUPERFAMILY SSF158710 28 170 1.31E-51 T 22-04-2016 VPUCM_RS14010 6b3a7a95985b3c88d9b168f4d18e970f 175 PIRSF PIRSF016183 1 174 2.0E-72 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VPUCM_RS14010 6b3a7a95985b3c88d9b168f4d18e970f 175 Gene3D G3DSA:1.10.60.30 103 173 1.3E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain VPUCM_RS05990 04530ba4b2856b4bbe2f88941f9fb63d 328 Gene3D G3DSA:1.10.530.40 150 327 1.4E-23 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 VPUCM_RS05990 04530ba4b2856b4bbe2f88941f9fb63d 328 SUPERFAMILY SSF53955 102 327 2.95E-31 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 Pfam PF05552 Conserved TM helix 21 69 8.6E-13 T 22-04-2016 IPR008910 Conserved TM helix VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF82861 33 118 1.31E-17 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 Pfam PF00924 Mechanosensitive ion channel 77 274 1.7E-58 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 PANTHER PTHR30221 20 288 4.8E-113 T 22-04-2016 VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 22-04-2016 IPR010920 LSM domain VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF82689 187 284 4.18E-34 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 Gene3D G3DSA:3.30.70.100 189 272 1.6E-30 T 22-04-2016 VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 PANTHER PTHR30221:SF7 20 288 4.8E-113 T 22-04-2016 VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 Gene3D G3DSA:2.30.30.60 135 184 2.2E-20 T 22-04-2016 VPUCM_RS13435 214333aac87f1e38592f9526aa0565e3 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VPUCM_RS04515 4854228e215e87fdb5f99aec8e2db030 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 3.0E-31 T 22-04-2016 IPR021250 Protein of unknown function DUF2789 VPUCM_RS08170 487df863603d25f7619264723d3ac43e 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 4.2E-10 T 22-04-2016 IPR008621 Cbb3-type cytochrome oxidase component VPUCM_RS03990 603c6e018439c522d05551088224e8eb 1189 Pfam PF07916 TraG-like protein, N-terminal region 3 456 4.9E-105 T 22-04-2016 IPR012931 TraG-like, N-terminal VPUCM_RS02725 4bf940c6f3703d8491fc2c090b8d2908 108 Gene3D G3DSA:3.30.160.100 3 92 1.0E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPUCM_RS02725 4bf940c6f3703d8491fc2c090b8d2908 108 PANTHER PTHR33231:SF3 1 108 2.2E-52 T 22-04-2016 VPUCM_RS02725 4bf940c6f3703d8491fc2c090b8d2908 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 4.5E-23 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPUCM_RS02725 4bf940c6f3703d8491fc2c090b8d2908 108 PANTHER PTHR33231 1 108 2.2E-52 T 22-04-2016 VPUCM_RS02725 4bf940c6f3703d8491fc2c090b8d2908 108 SUPERFAMILY SSF69754 1 103 1.11E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPUCM_RS02725 4bf940c6f3703d8491fc2c090b8d2908 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 5.0E-31 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VPUCM_RS03065 07af19b286828bad86626b07b3f817f5 74 SUPERFAMILY SSF46955 9 66 2.38E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain VPUCM_RS03065 07af19b286828bad86626b07b3f817f5 74 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 57 1.2E-15 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VPUCM_RS04770 7cfafefc2111c7f6fa884443bc0e93ac 183 Pfam PF01909 Nucleotidyltransferase domain 26 84 1.4E-4 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VPUCM_RS04770 7cfafefc2111c7f6fa884443bc0e93ac 183 Gene3D G3DSA:3.30.460.10 20 132 7.4E-8 T 22-04-2016 VPUCM_RS04770 7cfafefc2111c7f6fa884443bc0e93ac 183 SUPERFAMILY SSF81301 15 131 5.09E-7 T 22-04-2016 VPUCM_RS02070 a15cd5ea85fe881c35f30392eb122d80 419 PANTHER PTHR11101 1 418 3.2E-262 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VPUCM_RS02070 a15cd5ea85fe881c35f30392eb122d80 419 PANTHER PTHR11101:SF63 1 418 3.2E-262 T 22-04-2016 VPUCM_RS02070 a15cd5ea85fe881c35f30392eb122d80 419 Pfam PF01384 Phosphate transporter family 26 407 5.2E-119 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VPUCM_RS04330 23de9b8fc87aa4f85fdfe22c02504bfd 324 Pfam PF03595 Voltage-dependent anion channel 19 306 1.4E-31 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VPUCM_RS04330 23de9b8fc87aa4f85fdfe22c02504bfd 324 PANTHER PTHR37955 1 319 6.1E-94 T 22-04-2016 VPUCM_RS04330 23de9b8fc87aa4f85fdfe22c02504bfd 324 PANTHER PTHR37955:SF1 1 319 6.1E-94 T 22-04-2016 VPUCM_RS08385 ad7229119e0eafa23545bf8aed31969e 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 22-04-2016 IPR000614 Free Met sulfoxide reductase conserved site VPUCM_RS08385 ad7229119e0eafa23545bf8aed31969e 157 Gene3D G3DSA:3.30.450.40 4 151 4.4E-49 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS08385 ad7229119e0eafa23545bf8aed31969e 157 SUPERFAMILY SSF55781 4 145 1.61E-39 T 22-04-2016 IPR029016 GAF domain-like VPUCM_RS08385 ad7229119e0eafa23545bf8aed31969e 157 PANTHER PTHR21021 3 140 3.5E-54 T 22-04-2016 VPUCM_RS08385 ad7229119e0eafa23545bf8aed31969e 157 Pfam PF13185 GAF domain 31 145 8.3E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 VPUCM_RS09025 0cd21e6f2b66e8509138f32d39608d5a 649 PANTHER PTHR10342 252 585 7.7E-88 T 22-04-2016 VPUCM_RS09025 0cd21e6f2b66e8509138f32d39608d5a 649 Gene3D G3DSA:3.40.720.10 285 571 1.7E-45 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS09025 0cd21e6f2b66e8509138f32d39608d5a 649 PANTHER PTHR10342:SF236 252 585 7.7E-88 T 22-04-2016 VPUCM_RS09025 0cd21e6f2b66e8509138f32d39608d5a 649 Pfam PF00884 Sulfatase 285 555 5.6E-51 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VPUCM_RS09025 0cd21e6f2b66e8509138f32d39608d5a 649 SUPERFAMILY SSF53649 283 595 4.71E-70 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS09025 0cd21e6f2b66e8509138f32d39608d5a 649 PIRSF PIRSF005091 13 648 4.3E-100 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 VPUCM_RS10255 a23038b05696780f277728671a0bdc16 212 Gene3D G3DSA:3.40.50.620 14 148 7.7E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS10255 a23038b05696780f277728671a0bdc16 212 PANTHER PTHR30336 3 210 5.0E-69 T 22-04-2016 VPUCM_RS10255 a23038b05696780f277728671a0bdc16 212 Pfam PF02698 DUF218 domain 33 145 7.5E-23 T 22-04-2016 IPR003848 Domain of unknown function DUF218 VPUCM_RS10255 a23038b05696780f277728671a0bdc16 212 PANTHER PTHR30336:SF5 3 210 5.0E-69 T 22-04-2016 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 2.4E-170 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 Gene3D G3DSA:1.20.58.180 216 299 2.5E-36 T 22-04-2016 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 SUPERFAMILY SSF55681 8 293 5.14E-132 T 22-04-2016 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 PANTHER PTHR30075 1 303 7.0E-274 T 22-04-2016 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.667 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 Gene3D G3DSA:3.30.930.10 4 215 2.8E-104 T 22-04-2016 VPUCM_RS00095 7fd6a24837091f8c0b4c2fb703898e54 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 1.8E-148 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 Pfam PF03466 LysR substrate binding domain 98 304 1.1E-14 T 22-04-2016 IPR005119 LysR, substrate-binding VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 SUPERFAMILY SSF53850 92 302 1.12E-29 T 22-04-2016 VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 SUPERFAMILY SSF46785 6 88 1.63E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.2E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 PANTHER PTHR30118:SF12 1 301 1.0E-134 T 22-04-2016 VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 Gene3D G3DSA:3.40.190.10 92 178 1.5E-10 T 22-04-2016 VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 Gene3D G3DSA:3.40.190.10 279 307 1.5E-10 T 22-04-2016 VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 PANTHER PTHR30118 1 301 1.0E-134 T 22-04-2016 VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 Gene3D G3DSA:3.40.190.10 179 273 8.6E-20 T 22-04-2016 VPUCM_RS07715 ce7358c2738e428bfe2102e5a52216d4 312 Gene3D G3DSA:1.10.10.10 4 89 7.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS01200 97105b039c019984886cb4d79a357815 363 PANTHER PTHR22926:SF3 10 355 2.1E-77 T 22-04-2016 VPUCM_RS01200 97105b039c019984886cb4d79a357815 363 Pfam PF00953 Glycosyl transferase family 4 71 229 7.8E-28 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS01200 97105b039c019984886cb4d79a357815 363 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 5 347 1.1E-137 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 VPUCM_RS01200 97105b039c019984886cb4d79a357815 363 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 350 25.845 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 VPUCM_RS01200 97105b039c019984886cb4d79a357815 363 PANTHER PTHR22926 10 355 2.1E-77 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VPUCM_RS01160 f4b0767af59ec18d1aa531704f1281a8 140 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 9 33 1.6E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01160 f4b0767af59ec18d1aa531704f1281a8 140 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS05380 5a873140ca9b94f7cec884910f82a210 345 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 3 337 2.7E-78 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 VPUCM_RS05380 5a873140ca9b94f7cec884910f82a210 345 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 3 340 2.5E-69 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 VPUCM_RS02585 9619a9c6c8b28d7e71b5acb69ef1fb20 382 Pfam PF02690 Na+/Pi-cotransporter 218 328 1.5E-18 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VPUCM_RS02585 9619a9c6c8b28d7e71b5acb69ef1fb20 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 8.4E-24 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VPUCM_RS02585 9619a9c6c8b28d7e71b5acb69ef1fb20 382 PANTHER PTHR10010 19 381 5.2E-128 T 22-04-2016 VPUCM_RS02585 9619a9c6c8b28d7e71b5acb69ef1fb20 382 PANTHER PTHR10010:SF8 19 381 5.2E-128 T 22-04-2016 IPR030147 Sodium-dependent phosphate transporter NptA-like GO:0015114|GO:0035435 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 Gene3D G3DSA:3.30.830.10 472 706 2.0E-67 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 Gene3D G3DSA:3.30.830.10 4 229 3.1E-74 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 Gene3D G3DSA:3.30.830.10 707 918 3.2E-47 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 SUPERFAMILY SSF63411 232 468 1.15E-80 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 4.7E-39 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 PANTHER PTHR11851:SF131 377 918 0.0 T 22-04-2016 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 PANTHER PTHR11851:SF131 4 360 0.0 T 22-04-2016 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 Gene3D G3DSA:3.30.830.10 240 471 2.1E-74 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 SUPERFAMILY SSF63411 4 227 3.32E-60 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 SUPERFAMILY SSF63411 470 694 1.12E-60 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 PANTHER PTHR11851 4 360 0.0 T 22-04-2016 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 PANTHER PTHR11851 377 918 0.0 T 22-04-2016 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 8.5E-26 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 Pfam PF05193 Peptidase M16 inactive domain 648 822 3.6E-9 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 SUPERFAMILY SSF63411 703 909 3.84E-45 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS11385 4ae0fb3588d18a01fc4c0b454f32cc35 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 6.2E-82 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain VPUCM_RS08915 8d321f6a143e91ad3353c08a171a00a9 388 Pfam PF12698 ABC-2 family transporter protein 15 359 1.4E-36 T 22-04-2016 VPUCM_RS08915 8d321f6a143e91ad3353c08a171a00a9 388 PANTHER PTHR30294:SF19 7 387 1.6E-122 T 22-04-2016 VPUCM_RS08915 8d321f6a143e91ad3353c08a171a00a9 388 PANTHER PTHR30294 7 387 1.6E-122 T 22-04-2016 VPUCM_RS10320 122f7934f86788068e3b6b7fbccb4951 210 PANTHER PTHR10108 2 188 4.1E-21 T 22-04-2016 VPUCM_RS10320 122f7934f86788068e3b6b7fbccb4951 210 Pfam PF08242 Methyltransferase domain 44 137 5.4E-14 T 22-04-2016 IPR013217 Methyltransferase type 12 VPUCM_RS10320 122f7934f86788068e3b6b7fbccb4951 210 SUPERFAMILY SSF53335 5 202 1.1E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS10320 122f7934f86788068e3b6b7fbccb4951 210 Gene3D G3DSA:3.40.50.150 3 186 2.3E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS05550 2c3e34cb46a135cc460489f255213046 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 5.6E-188 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 VPUCM_RS05550 2c3e34cb46a135cc460489f255213046 423 PANTHER PTHR30510 1 421 2.7E-190 T 22-04-2016 VPUCM_RS05550 2c3e34cb46a135cc460489f255213046 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.551 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 VPUCM_RS11765 68b466dbb8f1b38929c28f4d0503b919 208 PANTHER PTHR10285 1 197 4.0E-102 T 22-04-2016 VPUCM_RS11765 68b466dbb8f1b38929c28f4d0503b919 208 Gene3D G3DSA:3.40.50.2020 2 208 1.2E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS11765 68b466dbb8f1b38929c28f4d0503b919 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 7.6E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS11765 68b466dbb8f1b38929c28f4d0503b919 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.618 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VPUCM_RS11765 68b466dbb8f1b38929c28f4d0503b919 208 SUPERFAMILY SSF53271 3 206 2.49E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VPUCM_RS11765 68b466dbb8f1b38929c28f4d0503b919 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 4.8E-92 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VPUCM_RS06265 d5fffe628b3a662bf30e324f5950660a 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.3E-18 T 22-04-2016 IPR025346 Protein of unknown function DUF4250 VPUCM_RS10140 ab84b3ae6a197fbffac791595aefee20 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 3.5E-85 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VPUCM_RS10140 ab84b3ae6a197fbffac791595aefee20 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 249 1.4E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VPUCM_RS10140 ab84b3ae6a197fbffac791595aefee20 343 Gene3D G3DSA:2.40.50.100 151 183 1.7E-13 T 22-04-2016 VPUCM_RS10140 ab84b3ae6a197fbffac791595aefee20 343 Gene3D G3DSA:2.40.50.100 61 90 1.7E-13 T 22-04-2016 VPUCM_RS10140 ab84b3ae6a197fbffac791595aefee20 343 PANTHER PTHR30469:SF10 4 335 9.8E-117 T 22-04-2016 VPUCM_RS10140 ab84b3ae6a197fbffac791595aefee20 343 PANTHER PTHR30469 4 335 9.8E-117 T 22-04-2016 VPUCM_RS10140 ab84b3ae6a197fbffac791595aefee20 343 SUPERFAMILY SSF111369 47 264 4.84E-33 T 22-04-2016 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 5.0E-80 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 PANTHER PTHR35799 2 169 1.5E-104 T 22-04-2016 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 Gene3D G3DSA:3.30.1360.80 1 171 1.6E-76 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 SUPERFAMILY SSF63411 4 162 4.94E-67 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.2E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 PIRSF PIRSF006160 1 162 1.2E-67 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 6.8E-62 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS13100 852332636d90db80435e44e72c29d923 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.796 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VPUCM_RS22740 a3b0ee655cec59a0c0b5651bd4737b99 166 PANTHER PTHR38605:SF1 1 166 3.7E-67 T 22-04-2016 VPUCM_RS22740 a3b0ee655cec59a0c0b5651bd4737b99 166 Pfam PF04317 YcjX-like family, DUF463 2 165 3.0E-64 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VPUCM_RS22740 a3b0ee655cec59a0c0b5651bd4737b99 166 PANTHER PTHR38605 1 166 3.7E-67 T 22-04-2016 VPUCM_RS11230 c3ab5ade836e9f1943b601f975f80ad1 126 PANTHER PTHR11803 1 125 1.5E-68 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VPUCM_RS11230 c3ab5ade836e9f1943b601f975f80ad1 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 5.6E-47 T 22-04-2016 IPR006056 RidA family VPUCM_RS11230 c3ab5ade836e9f1943b601f975f80ad1 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 3.6E-38 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VPUCM_RS11230 c3ab5ade836e9f1943b601f975f80ad1 126 PANTHER PTHR11803:SF15 1 125 1.5E-68 T 22-04-2016 VPUCM_RS11230 c3ab5ade836e9f1943b601f975f80ad1 126 Gene3D G3DSA:3.30.1330.40 2 124 1.6E-46 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VPUCM_RS11230 c3ab5ade836e9f1943b601f975f80ad1 126 SUPERFAMILY SSF55298 1 125 3.93E-42 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VPUCM_RS10400 6ab8d50b12a76377ed32ef14b59c83ed 574 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 74 233 4.3E-12 T 22-04-2016 VPUCM_RS10400 6ab8d50b12a76377ed32ef14b59c83ed 574 PANTHER PTHR33908:SF3 1 512 1.7E-90 T 22-04-2016 VPUCM_RS10400 6ab8d50b12a76377ed32ef14b59c83ed 574 PANTHER PTHR33908 1 512 1.7E-90 T 22-04-2016 VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 PANTHER PTHR26402:SF151 107 211 2.7E-18 T 22-04-2016 VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 Gene3D G3DSA:1.10.10.10 129 210 2.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 3.0E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 PANTHER PTHR26402 107 211 2.7E-18 T 22-04-2016 VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 SMART SM00421 151 208 2.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VPUCM_RS14170 5e981d14d8182fb301e85248212718d9 214 SUPERFAMILY SSF46894 141 210 1.94E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 Pfam PF07719 Tetratricopeptide repeat 277 309 2.8E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 Pfam PF13181 Tetratricopeptide repeat 86 117 0.12 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 SUPERFAMILY SSF48452 25 322 3.67E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 PANTHER PTHR23083 174 312 5.8E-33 T 22-04-2016 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 PANTHER PTHR23083 54 146 5.8E-33 T 22-04-2016 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 SMART SM00028 277 310 9.3E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 SMART SM00028 118 151 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 SMART SM00028 179 212 6.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 SMART SM00028 213 246 0.014 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 SMART SM00028 84 117 2.9 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 Gene3D G3DSA:1.25.40.10 43 324 1.6E-40 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS04185 70dfe0489b91f2ac9f50cffe6a75b78a 337 Pfam PF13432 Tetratricopeptide repeat 186 246 0.0015 T 22-04-2016 VPUCM_RS03070 bd2e892399feb07aacbd21e00cf98e95 337 Pfam PF04796 Plasmid encoded RepA protein 95 270 2.1E-30 T 22-04-2016 IPR006881 Plasmid encoded RepA protein VPUCM_RS11505 9504d2f6034e7bea578c4ae9b3fe78cc 246 PANTHER PTHR22617 68 246 1.5E-73 T 22-04-2016 VPUCM_RS11505 9504d2f6034e7bea578c4ae9b3fe78cc 246 Gene3D G3DSA:1.10.287.500 58 189 2.1E-50 T 22-04-2016 VPUCM_RS11505 9504d2f6034e7bea578c4ae9b3fe78cc 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 2.9E-76 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VPUCM_RS11505 9504d2f6034e7bea578c4ae9b3fe78cc 246 PANTHER PTHR22617:SF35 68 246 1.5E-73 T 22-04-2016 VPUCM_RS11505 9504d2f6034e7bea578c4ae9b3fe78cc 246 SUPERFAMILY SSF75708 26 245 7.32E-65 T 22-04-2016 VPUCM_RS11505 9504d2f6034e7bea578c4ae9b3fe78cc 246 PIRSF PIRSF002884 13 246 3.9E-89 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VPUCM_RS02735 a43df60f994572fbe48595a9551e420b 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 3.6E-80 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD VPUCM_RS02735 a43df60f994572fbe48595a9551e420b 242 PANTHER PTHR37423 1 240 6.5E-108 T 22-04-2016 VPUCM_RS02735 a43df60f994572fbe48595a9551e420b 242 Gene3D G3DSA:1.25.40.10 32 182 6.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS02735 a43df60f994572fbe48595a9551e420b 242 SUPERFAMILY SSF48452 30 119 6.07E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VPUCM_RS02735 a43df60f994572fbe48595a9551e420b 242 Pfam PF13525 Outer membrane lipoprotein 26 232 7.0E-79 T 22-04-2016 VPUCM_RS02735 a43df60f994572fbe48595a9551e420b 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 45.85 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD VPUCM_RS11810 305b259e68a77dd8f95f064831f4ab21 114 PANTHER PTHR38689 2 114 3.3E-56 T 22-04-2016 VPUCM_RS11810 305b259e68a77dd8f95f064831f4ab21 114 PANTHER PTHR38689:SF1 2 114 3.3E-56 T 22-04-2016 VPUCM_RS11810 305b259e68a77dd8f95f064831f4ab21 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 101 2.6E-6 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 VPUCM_RS11810 305b259e68a77dd8f95f064831f4ab21 114 PIRSF PIRSF000169 1 114 9.2E-38 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VPUCM_RS11810 305b259e68a77dd8f95f064831f4ab21 114 SUPERFAMILY SSF81343 4 113 9.16E-26 T 22-04-2016 VPUCM_RS11810 305b259e68a77dd8f95f064831f4ab21 114 Gene3D G3DSA:1.20.1300.10 1 113 1.4E-35 T 22-04-2016 VPUCM_RS11810 305b259e68a77dd8f95f064831f4ab21 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 5.2E-35 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VPUCM_RS16380 dfaa7e6d5aefadc5b78337066848dc16 363 SUPERFAMILY SSF49313 47 119 8.63E-6 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 PANTHER PTHR30559 2 358 1.2E-242 T 22-04-2016 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 Gene3D G3DSA:3.20.20.70 11 356 4.5E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 SUPERFAMILY SSF51569 4 356 9.52E-132 T 22-04-2016 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 3.3E-111 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 PIRSF PIRSF001359 13 358 9.0E-96 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 PANTHER PTHR30559:SF0 2 358 1.2E-242 T 22-04-2016 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 3.6E-90 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VPUCM_RS03960 5c28ce370a483b718359f5153b79d5dd 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 6.0E-179 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 PIRSF PIRSF006641 1 363 2.5E-157 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.10.20.30 268 363 1.5E-49 T 22-04-2016 IPR012675 Beta-grasp domain VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 SUPERFAMILY SSF52540 3 301 1.59E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.40.50.300 201 267 8.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.40.50.300 4 131 8.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.8E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 SUPERFAMILY SSF81271 279 363 2.09E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:1.10.150.300 132 200 5.1E-26 T 22-04-2016 IPR023192 TGS-like domain VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 PANTHER PTHR23305 1 363 2.8E-211 T 22-04-2016 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.085 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.3E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.6E-168 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.37E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.37E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.37E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS12325 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.37E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 Gene3D G3DSA:3.30.1330.60 185 288 3.6E-26 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PANTHER PTHR30128:SF10 26 288 2.3E-75 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PANTHER PTHR30128 26 288 2.3E-75 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.1E-174 T 22-04-2016 VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 Pfam PF00691 OmpA family 187 282 3.1E-19 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS11000 789d8f5f5cf96761e6245e662a686683 293 SUPERFAMILY SSF103088 158 287 1.16E-25 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS16780 39422570acc87d4af1c90d4f3a1f14b4 118 Pfam PF01293 Phosphoenolpyruvate carboxykinase 1 118 4.8E-56 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VPUCM_RS16780 39422570acc87d4af1c90d4f3a1f14b4 118 Gene3D G3DSA:2.170.8.10 1 20 4.3E-6 T 22-04-2016 VPUCM_RS16780 39422570acc87d4af1c90d4f3a1f14b4 118 SUPERFAMILY SSF53795 1 118 4.35E-45 T 22-04-2016 VPUCM_RS16780 39422570acc87d4af1c90d4f3a1f14b4 118 Gene3D G3DSA:3.90.228.20 21 118 6.9E-43 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VPUCM_RS16780 39422570acc87d4af1c90d4f3a1f14b4 118 PANTHER PTHR30031 1 118 1.3E-76 T 22-04-2016 VPUCM_RS07880 bbf6194be69433a23814b6b7c9426d92 526 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 3.0E-169 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VPUCM_RS07880 bbf6194be69433a23814b6b7c9426d92 526 PANTHER PTHR30047 1 521 5.2E-213 T 22-04-2016 VPUCM_RS07880 bbf6194be69433a23814b6b7c9426d92 526 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 VPUCM_RS07880 bbf6194be69433a23814b6b7c9426d92 526 PANTHER PTHR30047:SF2 1 521 5.2E-213 T 22-04-2016 VPUCM_RS07880 bbf6194be69433a23814b6b7c9426d92 526 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 2.4E-134 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VPUCM_RS07475 b18332ce55169b6a1e1f01a366c96a03 94 Pfam PF16804 Domain of unknown function (DUF5071) 1 79 1.1E-14 T 22-04-2016 IPR031837 Domain of unknown function DUF5071 VPUCM_RS00535 417b676b21dab9ef1b2c130ff0224e2e 144 Gene3D G3DSA:3.40.630.30 1 132 2.1E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS00535 417b676b21dab9ef1b2c130ff0224e2e 144 Pfam PF00583 Acetyltransferase (GNAT) family 46 122 2.0E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS00535 417b676b21dab9ef1b2c130ff0224e2e 144 SUPERFAMILY SSF55729 1 128 2.87E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS10065 3d30083ca70528ed0e3061c2f58b0fac 159 PANTHER PTHR35603 3 159 1.8E-30 T 22-04-2016 VPUCM_RS10065 3d30083ca70528ed0e3061c2f58b0fac 159 Pfam PF05433 Glycine zipper 2TM domain 65 105 1.2E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 VPUCM_RS23950 6bbedc425ef2a4ca31b09c47d94a2f9a 133 Gene3D G3DSA:3.10.105.10 38 133 1.8E-25 T 22-04-2016 VPUCM_RS23950 6bbedc425ef2a4ca31b09c47d94a2f9a 133 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 2 133 4.1E-29 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VPUCM_RS23950 6bbedc425ef2a4ca31b09c47d94a2f9a 133 PANTHER PTHR30290 6 133 9.6E-46 T 22-04-2016 VPUCM_RS23950 6bbedc425ef2a4ca31b09c47d94a2f9a 133 PANTHER PTHR30290:SF24 6 133 9.6E-46 T 22-04-2016 VPUCM_RS23950 6bbedc425ef2a4ca31b09c47d94a2f9a 133 SUPERFAMILY SSF53850 1 133 2.9E-32 T 22-04-2016 VPUCM_RS23950 6bbedc425ef2a4ca31b09c47d94a2f9a 133 Gene3D G3DSA:3.40.190.10 1 37 1.5E-7 T 22-04-2016 VPUCM_RS20775 056190690cd0698d1f55771611a7c204 144 PANTHER PTHR11956 1 144 1.7E-59 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS20775 056190690cd0698d1f55771611a7c204 144 Pfam PF00750 tRNA synthetases class I (R) 1 144 1.9E-61 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VPUCM_RS20775 056190690cd0698d1f55771611a7c204 144 PANTHER PTHR11956:SF1 1 144 1.7E-59 T 22-04-2016 VPUCM_RS20775 056190690cd0698d1f55771611a7c204 144 SUPERFAMILY SSF52374 7 142 5.49E-30 T 22-04-2016 VPUCM_RS20775 056190690cd0698d1f55771611a7c204 144 Gene3D G3DSA:3.40.50.620 3 140 3.7E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS02165 12c41656d3bf24a2432f199024a47839 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.87 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid VPUCM_RS02165 12c41656d3bf24a2432f199024a47839 130 Gene3D G3DSA:3.30.230.10 4 130 4.7E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VPUCM_RS02165 12c41656d3bf24a2432f199024a47839 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.9E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02165 12c41656d3bf24a2432f199024a47839 130 PANTHER PTHR21569 1 130 6.6E-72 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS02165 12c41656d3bf24a2432f199024a47839 130 SUPERFAMILY SSF54211 5 130 3.53E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VPUCM_RS02165 12c41656d3bf24a2432f199024a47839 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VPUCM_RS10835 c5e3330e54eae203f5010d5194d54799 106 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 22-04-2016 IPR001876 Zinc finger, RanBP2-type GO:0008270 VPUCM_RS10835 c5e3330e54eae203f5010d5194d54799 106 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 4.8E-6 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 VPUCM_RS01085 4e5820c077dbeba68e1fbe0d7293a9ff 733 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 717 1.9E-250 T 22-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH VPUCM_RS12735 8d1b26dc3f8d0b75bb58848211d38dca 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 2.0E-235 T 22-04-2016 IPR010520 UPF0255 family VPUCM_RS12735 8d1b26dc3f8d0b75bb58848211d38dca 415 Gene3D G3DSA:3.40.50.1820 347 388 1.2E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS12735 8d1b26dc3f8d0b75bb58848211d38dca 415 Gene3D G3DSA:3.40.50.1820 156 300 1.2E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS12735 8d1b26dc3f8d0b75bb58848211d38dca 415 SUPERFAMILY SSF53474 47 411 1.84E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS12735 8d1b26dc3f8d0b75bb58848211d38dca 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 55.642 T 22-04-2016 IPR010520 UPF0255 family VPUCM_RS10405 850a465fe03d269672838446b3409e72 222 Pfam PF09335 SNARE associated Golgi protein 62 177 3.9E-18 T 22-04-2016 IPR032816 SNARE associated Golgi protein VPUCM_RS10405 850a465fe03d269672838446b3409e72 222 PANTHER PTHR12677 1 221 8.1E-25 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VPUCM_RS04420 4451147dfa22247e6736d5c15fb8a15c 198 SUPERFAMILY SSF88697 3 189 1.52E-46 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS04420 4451147dfa22247e6736d5c15fb8a15c 198 PANTHER PTHR23327:SF0 6 134 5.8E-18 T 22-04-2016 VPUCM_RS04420 4451147dfa22247e6736d5c15fb8a15c 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 118 1.9E-16 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VPUCM_RS04420 4451147dfa22247e6736d5c15fb8a15c 198 SMART SM00464 3 190 0.0062 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VPUCM_RS04420 4451147dfa22247e6736d5c15fb8a15c 198 PANTHER PTHR23327 6 134 5.8E-18 T 22-04-2016 VPUCM_RS01165 7903429cd2e52650e3b7f3adb8026db7 242 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.1E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01165 7903429cd2e52650e3b7f3adb8026db7 242 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 8 33 5.1E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS01165 7903429cd2e52650e3b7f3adb8026db7 242 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS15865 3a2ab64676fc6eb4c4cdc4225c143439 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 2.2E-58 T 22-04-2016 IPR007456 Smg VPUCM_RS15865 3a2ab64676fc6eb4c4cdc4225c143439 159 PANTHER PTHR38692:SF1 1 159 5.2E-76 T 22-04-2016 VPUCM_RS15865 3a2ab64676fc6eb4c4cdc4225c143439 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.554 T 22-04-2016 IPR007456 Smg VPUCM_RS15865 3a2ab64676fc6eb4c4cdc4225c143439 159 PANTHER PTHR38692 1 159 5.2E-76 T 22-04-2016 VPUCM_RS06370 55fde02b0ebb5a85f517a84f34d40e6c 206 PANTHER PTHR17490 1 205 1.6E-99 T 22-04-2016 VPUCM_RS06370 55fde02b0ebb5a85f517a84f34d40e6c 206 SUPERFAMILY SSF55821 1 204 1.46E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VPUCM_RS06370 55fde02b0ebb5a85f517a84f34d40e6c 206 PANTHER PTHR17490:SF7 1 205 1.6E-99 T 22-04-2016 VPUCM_RS06370 55fde02b0ebb5a85f517a84f34d40e6c 206 Gene3D G3DSA:3.90.870.10 2 203 5.0E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VPUCM_RS06370 55fde02b0ebb5a85f517a84f34d40e6c 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 8.7E-71 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VPUCM_RS06370 55fde02b0ebb5a85f517a84f34d40e6c 206 Pfam PF01300 Telomere recombination 23 198 1.4E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VPUCM_RS09395 030e86cb9fa066467ec9228cb71915af 357 Gene3D G3DSA:3.40.190.10 140 278 1.3E-26 T 22-04-2016 VPUCM_RS09395 030e86cb9fa066467ec9228cb71915af 357 PANTHER PTHR30222:SF2 9 354 2.2E-91 T 22-04-2016 VPUCM_RS09395 030e86cb9fa066467ec9228cb71915af 357 SUPERFAMILY SSF53850 25 355 3.78E-60 T 22-04-2016 VPUCM_RS09395 030e86cb9fa066467ec9228cb71915af 357 Pfam PF13416 Bacterial extracellular solute-binding protein 46 319 9.3E-36 T 22-04-2016 VPUCM_RS09395 030e86cb9fa066467ec9228cb71915af 357 PANTHER PTHR30222 9 354 2.2E-91 T 22-04-2016 VPUCM_RS09395 030e86cb9fa066467ec9228cb71915af 357 Gene3D G3DSA:3.40.190.10 24 139 1.2E-17 T 22-04-2016 VPUCM_RS09395 030e86cb9fa066467ec9228cb71915af 357 Gene3D G3DSA:3.40.190.10 279 322 1.2E-17 T 22-04-2016 VPUCM_RS12035 bd2b34b2179936c8f3c9409331d4d0a5 469 Gene3D G3DSA:2.40.160.10 70 468 4.4E-43 T 22-04-2016 IPR023614 Porin domain VPUCM_RS04085 9cb815174defc5a935d0a54ecb4c6001 782 SUPERFAMILY SSF141371 466 554 9.42E-7 T 22-04-2016 VPUCM_RS04085 9cb815174defc5a935d0a54ecb4c6001 782 Gene3D G3DSA:2.40.10.220 468 524 2.7E-4 T 22-04-2016 VPUCM_RS04085 9cb815174defc5a935d0a54ecb4c6001 782 Pfam PF07238 PilZ domain 145 229 2.9E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VPUCM_RS04085 9cb815174defc5a935d0a54ecb4c6001 782 Pfam PF07238 PilZ domain 470 560 3.7E-14 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VPUCM_RS15780 6eb970077af8f45ef38ee43b6c3caf3d 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 8.2E-30 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VPUCM_RS15780 6eb970077af8f45ef38ee43b6c3caf3d 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 2.6E-23 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VPUCM_RS15780 6eb970077af8f45ef38ee43b6c3caf3d 127 PANTHER PTHR28259 6 126 6.0E-37 T 22-04-2016 VPUCM_RS15780 6eb970077af8f45ef38ee43b6c3caf3d 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.99 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VPUCM_RS07490 8ee84e66bc12c7d4786d61003c49a0aa 477 Pfam PF02706 Chain length determinant protein 11 142 4.3E-6 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VPUCM_RS07490 8ee84e66bc12c7d4786d61003c49a0aa 477 PANTHER PTHR32309 16 294 2.3E-24 T 22-04-2016 VPUCM_RS07490 8ee84e66bc12c7d4786d61003c49a0aa 477 PANTHER PTHR32309 326 474 2.3E-24 T 22-04-2016 VPUCM_RS07490 8ee84e66bc12c7d4786d61003c49a0aa 477 PANTHER PTHR32309:SF13 16 294 2.3E-24 T 22-04-2016 VPUCM_RS07490 8ee84e66bc12c7d4786d61003c49a0aa 477 PANTHER PTHR32309:SF13 326 474 2.3E-24 T 22-04-2016 VPUCM_RS11440 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VPUCM_RS11440 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 Gene3D G3DSA:3.40.30.10 10 177 4.4E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11440 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 PANTHER PTHR10681 1 178 5.1E-73 T 22-04-2016 VPUCM_RS11440 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 SUPERFAMILY SSF52833 46 178 2.78E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11440 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 Pfam PF08534 Redoxin 41 164 4.0E-27 T 22-04-2016 IPR013740 Redoxin GO:0016491 VPUCM_RS11440 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 PANTHER PTHR10681:SF107 1 178 5.1E-73 T 22-04-2016 VPUCM_RS11440 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 6.5E-71 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VPUCM_RS10775 9dacebbe0eb0bb3c1226797d977d38e8 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 1.7E-58 T 22-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VPUCM_RS10775 9dacebbe0eb0bb3c1226797d977d38e8 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 190 498 8.8E-135 T 22-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VPUCM_RS04180 a60088288673e7af89e085e8e0e50b8d 313 PANTHER PTHR35007 9 312 7.7E-59 T 22-04-2016 VPUCM_RS04180 a60088288673e7af89e085e8e0e50b8d 313 PANTHER PTHR35007:SF2 9 312 7.7E-59 T 22-04-2016 VPUCM_RS04180 a60088288673e7af89e085e8e0e50b8d 313 Pfam PF00482 Type II secretion system (T2SS), protein F 172 299 2.9E-23 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS03610 a2ab10e70eeb081bdcb7e6cf8810842d 321 PANTHER PTHR10120:SF19 20 287 4.1E-61 T 22-04-2016 VPUCM_RS03610 a2ab10e70eeb081bdcb7e6cf8810842d 321 PANTHER PTHR10120 20 287 4.1E-61 T 22-04-2016 VPUCM_RS03610 a2ab10e70eeb081bdcb7e6cf8810842d 321 Gene3D G3DSA:3.30.2010.10 75 163 8.4E-26 T 22-04-2016 VPUCM_RS03610 a2ab10e70eeb081bdcb7e6cf8810842d 321 Pfam PF01435 Peptidase family M48 82 285 2.5E-31 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VPUCM_RS13795 25c3242acc03122b0688a67d575a2e5e 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.2E-132 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VPUCM_RS13795 25c3242acc03122b0688a67d575a2e5e 356 PANTHER PTHR33529 1 355 7.2E-150 T 22-04-2016 VPUCM_RS13795 25c3242acc03122b0688a67d575a2e5e 356 PANTHER PTHR33529:SF1 1 355 7.2E-150 T 22-04-2016 VPUCM_RS13795 25c3242acc03122b0688a67d575a2e5e 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 3.8E-70 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 PANTHER PTHR10245 5 185 3.1E-66 T 22-04-2016 VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 PANTHER PTHR10245:SF42 5 185 3.1E-66 T 22-04-2016 VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 Gene3D G3DSA:2.60.120.10 73 183 2.1E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 Gene3D G3DSA:1.10.260.40 3 72 4.4E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 Pfam PF01381 Helix-turn-helix 12 64 1.1E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 SMART SM00530 9 64 5.0E-17 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 SUPERFAMILY SSF47413 2 70 3.22E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 Pfam PF07883 Cupin domain 111 178 1.4E-16 T 22-04-2016 IPR013096 Cupin 2, conserved barrel VPUCM_RS09220 6b5760663bb509f9d61061dc0b7fb15a 185 SUPERFAMILY SSF51182 49 183 3.93E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain VPUCM_RS10125 e35798d6bbbcf3630ae9c36feea50f10 188 SUPERFAMILY SSF48150 5 186 3.3E-73 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VPUCM_RS10125 e35798d6bbbcf3630ae9c36feea50f10 188 PANTHER PTHR30037:SF4 7 183 3.7E-99 T 22-04-2016 VPUCM_RS10125 e35798d6bbbcf3630ae9c36feea50f10 188 Pfam PF03352 Methyladenine glycosylase 9 184 2.1E-72 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VPUCM_RS10125 e35798d6bbbcf3630ae9c36feea50f10 188 PANTHER PTHR30037 7 183 3.7E-99 T 22-04-2016 VPUCM_RS10125 e35798d6bbbcf3630ae9c36feea50f10 188 Gene3D G3DSA:1.10.340.30 5 184 1.5E-77 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VPUCM_RS02065 4362ed51527e47f5fa2de35a106f4bc8 203 PIRSF PIRSF006158 1 203 7.3E-71 T 22-04-2016 IPR016476 SH3 domain protein VPUCM_RS02065 4362ed51527e47f5fa2de35a106f4bc8 203 SMART SM00287 20 86 9.7E-11 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type VPUCM_RS02065 4362ed51527e47f5fa2de35a106f4bc8 203 Pfam PF08239 Bacterial SH3 domain 33 82 1.4E-9 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type VPUCM_RS02065 4362ed51527e47f5fa2de35a106f4bc8 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 1.7E-53 T 22-04-2016 IPR016476 SH3 domain protein VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 PANTHER PTHR32179 1 294 6.1E-130 T 22-04-2016 VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 SUPERFAMILY SSF54675 15 128 2.39E-33 T 22-04-2016 VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 2.0E-27 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 SUPERFAMILY SSF51690 130 294 1.06E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 Gene3D G3DSA:3.20.20.70 150 283 1.9E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 8.4E-58 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 PIRSF PIRSF006250 16 295 9.0E-101 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 Gene3D G3DSA:3.90.1170.20 16 149 1.4E-51 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VPUCM_RS13025 5593777850d39c5026c4f6a77c30f83b 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 5.7E-95 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 VPUCM_RS00705 88d4d053faaeb23f12f0fef5f495ad36 400 SUPERFAMILY SSF53067 146 235 5.89E-24 T 22-04-2016 VPUCM_RS00705 88d4d053faaeb23f12f0fef5f495ad36 400 PIRSF PIRSF015761 9 400 2.9E-39 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VPUCM_RS00705 88d4d053faaeb23f12f0fef5f495ad36 400 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 398 1.7E-93 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VPUCM_RS00705 88d4d053faaeb23f12f0fef5f495ad36 400 Pfam PF12693 GspL periplasmic domain 241 399 8.4E-55 T 22-04-2016 IPR025691 GspL periplasmic domain VPUCM_RS00705 88d4d053faaeb23f12f0fef5f495ad36 400 Pfam PF05134 Type II secretion system (T2SS), protein L 5 237 5.9E-86 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VPUCM_RS00705 88d4d053faaeb23f12f0fef5f495ad36 400 SUPERFAMILY SSF53067 2 144 4.27E-42 T 22-04-2016 VPUCM_RS24195 a9679efb5c55fc3e275f47e9330fc253 98 Pfam PF00872 Transposase, Mutator family 2 98 1.3E-21 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 VPUCM_RS24195 a9679efb5c55fc3e275f47e9330fc253 98 PANTHER PTHR33217 1 98 4.8E-42 T 22-04-2016 VPUCM_RS03985 884706d48f8d2d3fbc68d37ebb880d1f 462 Pfam PF06122 Conjugative relaxosome accessory transposon protein 28 388 1.3E-107 T 22-04-2016 IPR010927 Type IV conjugative transfer system protein TraH VPUCM_RS03185 57dc7d01907ca2b5d364d1524ce3ca87 455 PANTHER PTHR33451 1 442 2.6E-194 T 22-04-2016 VPUCM_RS03185 57dc7d01907ca2b5d364d1524ce3ca87 455 PANTHER PTHR33451:SF5 1 442 2.6E-194 T 22-04-2016 VPUCM_RS03185 57dc7d01907ca2b5d364d1524ce3ca87 455 Pfam PF03553 Na+/H+ antiporter family 16 213 1.4E-12 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VPUCM_RS04685 0a15d43617cf255b2e02a80f1ed51c24 143 PANTHER PTHR30272 1 143 4.7E-81 T 22-04-2016 VPUCM_RS04685 0a15d43617cf255b2e02a80f1ed51c24 143 SUPERFAMILY SSF54637 1 139 3.43E-48 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS04685 0a15d43617cf255b2e02a80f1ed51c24 143 Gene3D G3DSA:3.10.129.10 1 140 1.0E-56 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS04685 0a15d43617cf255b2e02a80f1ed51c24 143 Pfam PF07977 FabA-like domain 10 134 9.2E-40 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VPUCM_RS04685 0a15d43617cf255b2e02a80f1ed51c24 143 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 139 2.1E-59 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VPUCM_RS04685 0a15d43617cf255b2e02a80f1ed51c24 143 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 142 36.564 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 118 140 5.0E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 148 163 5.0E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 163 179 5.0E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 8.9E-7 T 22-04-2016 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 8.9E-7 T 22-04-2016 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 8.9E-7 T 22-04-2016 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 Pfam PF13488 Glycine zipper 38 86 3.8E-11 T 22-04-2016 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 PANTHER PTHR30128 24 222 6.5E-60 T 22-04-2016 VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 SUPERFAMILY SSF103088 106 221 4.71E-37 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 Gene3D G3DSA:3.30.1330.60 107 220 2.3E-38 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS09690 8e016047ad19431bfdf668f825439073 222 Pfam PF00691 OmpA family 118 212 3.1E-23 T 22-04-2016 IPR006665 OmpA-like domain VPUCM_RS00340 a3971ec9afe39d993718ae91d229a6cd 458 PANTHER PTHR30354 9 458 5.2E-252 T 22-04-2016 VPUCM_RS00340 a3971ec9afe39d993718ae91d229a6cd 458 PANTHER PTHR30354:SF2 9 458 5.2E-252 T 22-04-2016 VPUCM_RS00340 a3971ec9afe39d993718ae91d229a6cd 458 Pfam PF02447 GntP family permease 14 456 1.8E-117 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VPUCM_RS00340 a3971ec9afe39d993718ae91d229a6cd 458 PIRSF PIRSF002746 9 458 8.0E-145 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VPUCM_RS00340 a3971ec9afe39d993718ae91d229a6cd 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 457 5.2E-107 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VPUCM_RS00475 a39728d0993036613ed29d7e7cd4375d 342 Pfam PF01594 Domain of unknown function DUF20 14 330 1.2E-47 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VPUCM_RS00475 a39728d0993036613ed29d7e7cd4375d 342 PANTHER PTHR21716:SF16 17 334 1.3E-65 T 22-04-2016 VPUCM_RS00475 a39728d0993036613ed29d7e7cd4375d 342 PANTHER PTHR21716 17 334 1.3E-65 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VPUCM_RS03920 147bd13fc713cc960cf01c8126ae28b9 165 Gene3D G3DSA:2.60.40.790 13 164 2.6E-30 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS03920 147bd13fc713cc960cf01c8126ae28b9 165 Pfam PF00011 Hsp20/alpha crystallin family 65 164 1.3E-19 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VPUCM_RS03920 147bd13fc713cc960cf01c8126ae28b9 165 PANTHER PTHR11527 56 165 7.5E-30 T 22-04-2016 IPR031107 Small heat shock protein HSP20 VPUCM_RS03920 147bd13fc713cc960cf01c8126ae28b9 165 PANTHER PTHR11527 2 22 7.5E-30 T 22-04-2016 IPR031107 Small heat shock protein HSP20 VPUCM_RS03920 147bd13fc713cc960cf01c8126ae28b9 165 PANTHER PTHR11527:SF122 56 165 7.5E-30 T 22-04-2016 VPUCM_RS03920 147bd13fc713cc960cf01c8126ae28b9 165 PANTHER PTHR11527:SF122 2 22 7.5E-30 T 22-04-2016 VPUCM_RS03920 147bd13fc713cc960cf01c8126ae28b9 165 SUPERFAMILY SSF49764 52 164 7.32E-31 T 22-04-2016 IPR008978 HSP20-like chaperone VPUCM_RS13400 6eedf24460a17aee7b4703e2773646b0 197 PANTHER PTHR23407:SF1 1 196 3.7E-60 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VPUCM_RS13400 6eedf24460a17aee7b4703e2773646b0 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 189 3.2E-43 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VPUCM_RS13400 6eedf24460a17aee7b4703e2773646b0 197 SUPERFAMILY SSF100950 5 195 1.81E-57 T 22-04-2016 VPUCM_RS13400 6eedf24460a17aee7b4703e2773646b0 197 PANTHER PTHR23407 1 196 3.7E-60 T 22-04-2016 VPUCM_RS13400 6eedf24460a17aee7b4703e2773646b0 197 PIRSF PIRSF006806 2 192 3.4E-36 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VPUCM_RS13400 6eedf24460a17aee7b4703e2773646b0 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 3.3E-52 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VPUCM_RS13400 6eedf24460a17aee7b4703e2773646b0 197 Gene3D G3DSA:3.40.50.10420 6 195 3.9E-57 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain VPUCM_RS10410 50e289e7adc83159f6036aecc828b061 249 PANTHER PTHR10859:SF49 3 237 7.3E-66 T 22-04-2016 VPUCM_RS10410 50e289e7adc83159f6036aecc828b061 249 SUPERFAMILY SSF53448 1 232 6.65E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS10410 50e289e7adc83159f6036aecc828b061 249 PANTHER PTHR10859 3 237 7.3E-66 T 22-04-2016 VPUCM_RS10410 50e289e7adc83159f6036aecc828b061 249 Gene3D G3DSA:3.90.550.10 3 177 2.8E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VPUCM_RS10410 50e289e7adc83159f6036aecc828b061 249 Pfam PF00535 Glycosyl transferase family 2 6 127 1.2E-25 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VPUCM_RS12745 796647f71fcc01e5bc627e38421a3e03 429 PANTHER PTHR11119 1 418 1.0E-174 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS12745 796647f71fcc01e5bc627e38421a3e03 429 PIRSF PIRSF005353 1 429 1.9E-188 T 22-04-2016 IPR026033 Purine permease PbuG-like VPUCM_RS12745 796647f71fcc01e5bc627e38421a3e03 429 Pfam PF00860 Permease family 17 391 2.0E-56 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS12745 796647f71fcc01e5bc627e38421a3e03 429 PANTHER PTHR11119:SF9 1 418 1.0E-174 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 VPUCM_RS00025 d979041072884e9e71b07b5e6728e1a6 44 PANTHER PTHR14503 1 43 1.1E-21 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00025 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.8E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00025 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00025 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00025 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00025 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 PANTHER PTHR30012 9 407 1.7E-154 T 22-04-2016 VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 1.3E-27 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 2.4E-33 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-18 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-18 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 1.0E-18 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 1.0E-18 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VPUCM_RS13040 44f420c3314e8f0b15029e2e3f427abc 407 PANTHER PTHR30012:SF0 9 407 1.7E-154 T 22-04-2016 VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 PIRSF PIRSF006276 1 145 1.6E-18 T 22-04-2016 IPR006015 Universal stress protein A VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 PANTHER PTHR31964 1 144 3.0E-28 T 22-04-2016 VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 Gene3D G3DSA:3.40.50.620 1 144 1.6E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 120 142 2.3E-11 T 22-04-2016 IPR006015 Universal stress protein A VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 2 20 2.3E-11 T 22-04-2016 IPR006015 Universal stress protein A VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 102 114 2.3E-11 T 22-04-2016 IPR006015 Universal stress protein A VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 PANTHER PTHR31964:SF42 1 144 3.0E-28 T 22-04-2016 VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 SUPERFAMILY SSF52402 2 143 1.93E-34 T 22-04-2016 VPUCM_RS01725 203a297866f120b24689c80a6161208b 145 Pfam PF00582 Universal stress protein family 1 142 1.5E-32 T 22-04-2016 IPR006016 UspA GO:0006950 VPUCM_RS08175 2c68392cbaa27e8e44488a90b37d919d 206 Gene3D G3DSA:1.10.760.10 21 202 6.9E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS08175 2c68392cbaa27e8e44488a90b37d919d 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 6.0E-82 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VPUCM_RS08175 2c68392cbaa27e8e44488a90b37d919d 206 PANTHER PTHR10422 30 165 5.1E-87 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VPUCM_RS08175 2c68392cbaa27e8e44488a90b37d919d 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 1.4E-80 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VPUCM_RS08175 2c68392cbaa27e8e44488a90b37d919d 206 PANTHER PTHR10422:SF23 30 165 5.1E-87 T 22-04-2016 VPUCM_RS08175 2c68392cbaa27e8e44488a90b37d919d 206 SUPERFAMILY SSF46626 21 202 3.32E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS02895 378b6d36b73ceb8447db98df6921f363 158 PANTHER PTHR11911 1 145 7.3E-39 T 22-04-2016 VPUCM_RS02895 378b6d36b73ceb8447db98df6921f363 158 SUPERFAMILY SSF54631 7 138 1.23E-31 T 22-04-2016 VPUCM_RS02895 378b6d36b73ceb8447db98df6921f363 158 Gene3D G3DSA:3.20.20.70 9 136 2.6E-29 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS02895 378b6d36b73ceb8447db98df6921f363 158 PANTHER PTHR11911:SF90 1 145 7.3E-39 T 22-04-2016 VPUCM_RS02895 378b6d36b73ceb8447db98df6921f363 158 SMART SM00116 90 137 1.3E-5 T 22-04-2016 IPR000644 CBS domain VPUCM_RS02895 378b6d36b73ceb8447db98df6921f363 158 SMART SM00116 17 65 7.4E-9 T 22-04-2016 IPR000644 CBS domain VPUCM_RS02895 378b6d36b73ceb8447db98df6921f363 158 Pfam PF00571 CBS domain 10 64 2.3E-12 T 22-04-2016 IPR000644 CBS domain VPUCM_RS02895 378b6d36b73ceb8447db98df6921f363 158 Pfam PF00571 CBS domain 85 133 3.5E-8 T 22-04-2016 IPR000644 CBS domain VPUCM_RS01660 735f2d8ca7896ac6acce7e59e1c43eeb 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 1.9E-26 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VPUCM_RS01660 735f2d8ca7896ac6acce7e59e1c43eeb 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 5.0E-31 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VPUCM_RS01660 735f2d8ca7896ac6acce7e59e1c43eeb 66 Gene3D G3DSA:3.30.1910.10 2 65 8.0E-28 T 22-04-2016 VPUCM_RS11185 575ced79694a1045c928bb19a71026bf 99 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.3E-24 T 22-04-2016 IPR027373 Ribbon-helix-helix domain VPUCM_RS16220 6769e5ce831b97f960479d185df2f04b 123 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 122 1.4E-29 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VPUCM_RS16220 6769e5ce831b97f960479d185df2f04b 123 PANTHER PTHR23309 1 123 4.0E-78 T 22-04-2016 VPUCM_RS16220 6769e5ce831b97f960479d185df2f04b 123 PANTHER PTHR23309:SF18 1 123 4.0E-78 T 22-04-2016 VPUCM_RS16220 6769e5ce831b97f960479d185df2f04b 123 SUPERFAMILY SSF51735 2 121 1.6E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS16220 6769e5ce831b97f960479d185df2f04b 123 Gene3D G3DSA:3.40.50.720 2 122 4.7E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain VPUCM_RS04545 b37485643e54aca09681593b38c57d67 454 SUPERFAMILY SSF161070 10 453 7.06E-119 T 22-04-2016 VPUCM_RS04545 b37485643e54aca09681593b38c57d67 454 PANTHER PTHR11616 10 453 1.1E-174 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS04545 b37485643e54aca09681593b38c57d67 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 133 1.4E-21 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS04545 b37485643e54aca09681593b38c57d67 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 2.4E-26 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS04545 b37485643e54aca09681593b38c57d67 454 PANTHER PTHR11616:SF167 10 453 1.1E-174 T 22-04-2016 VPUCM_RS04545 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS04545 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS04545 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VPUCM_RS13110 011752c9aa52b8c1904ab0a7acd93f87 522 PANTHER PTHR38761 1 522 2.3E-264 T 22-04-2016 VPUCM_RS13110 011752c9aa52b8c1904ab0a7acd93f87 522 SUPERFAMILY SSF55931 6 513 1.05E-199 T 22-04-2016 VPUCM_RS13110 011752c9aa52b8c1904ab0a7acd93f87 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 516 2.8E-208 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VPUCM_RS13110 011752c9aa52b8c1904ab0a7acd93f87 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 8.0E-168 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VPUCM_RS13110 011752c9aa52b8c1904ab0a7acd93f87 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 222.258 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VPUCM_RS09840 755ab4e43733d8a230a89898565857ac 548 SUPERFAMILY SSF53383 29 530 1.65E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VPUCM_RS09840 755ab4e43733d8a230a89898565857ac 548 PANTHER PTHR11999 42 548 9.7E-158 T 22-04-2016 VPUCM_RS09840 755ab4e43733d8a230a89898565857ac 548 Gene3D G3DSA:3.90.1150.10 396 530 1.7E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VPUCM_RS09840 755ab4e43733d8a230a89898565857ac 548 PANTHER PTHR11999:SF5 42 548 9.7E-158 T 22-04-2016 VPUCM_RS09840 755ab4e43733d8a230a89898565857ac 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 4.6E-57 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VPUCM_RS09840 755ab4e43733d8a230a89898565857ac 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 5.8E-302 T 22-04-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VPUCM_RS09840 755ab4e43733d8a230a89898565857ac 548 Gene3D G3DSA:3.40.640.10 116 395 2.2E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VPUCM_RS08145 7880f1ecea4ee9bd766a2482b8c57e20 225 PANTHER PTHR42208:SF1 1 225 1.2E-59 T 22-04-2016 VPUCM_RS08145 7880f1ecea4ee9bd766a2482b8c57e20 225 PANTHER PTHR42208 1 225 1.2E-59 T 22-04-2016 VPUCM_RS08145 7880f1ecea4ee9bd766a2482b8c57e20 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 2.4E-55 T 22-04-2016 VPUCM_RS08020 c44a94a0acf06d74e309067bbdd58738 300 Pfam PF15575 Immunity protein 49 68 284 9.7E-41 T 22-04-2016 IPR029074 Immunity protein 49 VPUCM_RS14100 4e2b8808fd61f2fff698df9aace6cffd 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 3.8E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS14100 4e2b8808fd61f2fff698df9aace6cffd 159 SUPERFAMILY SSF54523 10 70 7.77E-7 T 22-04-2016 VPUCM_RS03120 6e005854ba8c7a66f80195fcc886ed76 506 Pfam PF03553 Na+/H+ antiporter family 161 469 2.2E-50 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VPUCM_RS03120 6e005854ba8c7a66f80195fcc886ed76 506 PANTHER PTHR33451:SF7 6 504 1.2E-121 T 22-04-2016 VPUCM_RS03120 6e005854ba8c7a66f80195fcc886ed76 506 PANTHER PTHR33451 6 504 1.2E-121 T 22-04-2016 VPUCM_RS01095 e7065c7f170660322f93ac69949387a5 228 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 22 222 4.7E-52 T 22-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VPUCM_RS01095 e7065c7f170660322f93ac69949387a5 228 SUPERFAMILY SSF159270 27 226 2.62E-55 T 22-04-2016 IPR023373 YmcC-like domain VPUCM_RS01095 e7065c7f170660322f93ac69949387a5 228 Gene3D G3DSA:2.40.360.10 25 226 1.9E-63 T 22-04-2016 IPR023373 YmcC-like domain VPUCM_RS04335 5ce946c6a52745a22f7fe5daa890e2c8 607 PANTHER PTHR10342 222 566 3.3E-107 T 22-04-2016 VPUCM_RS04335 5ce946c6a52745a22f7fe5daa890e2c8 607 Gene3D G3DSA:3.40.720.10 250 538 3.9E-38 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VPUCM_RS04335 5ce946c6a52745a22f7fe5daa890e2c8 607 Pfam PF00884 Sulfatase 250 521 1.1E-32 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VPUCM_RS04335 5ce946c6a52745a22f7fe5daa890e2c8 607 PANTHER PTHR10342:SF235 222 566 3.3E-107 T 22-04-2016 VPUCM_RS04335 5ce946c6a52745a22f7fe5daa890e2c8 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 4.9E-50 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VPUCM_RS04335 5ce946c6a52745a22f7fe5daa890e2c8 607 SUPERFAMILY SSF53649 247 571 2.36E-59 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VPUCM_RS04335 5ce946c6a52745a22f7fe5daa890e2c8 607 PIRSF PIRSF004950 1 606 4.2E-234 T 22-04-2016 IPR012159 Inner membrane protein YejM VPUCM_RS03980 ee4209913e1387998ce3b043ad193480 314 Gene3D G3DSA:3.40.30.10 164 257 1.2E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS03980 ee4209913e1387998ce3b043ad193480 314 TIGRFAM TIGR02740 TraF-like: TraF-like protein 10 270 3.0E-107 T 22-04-2016 IPR014111 Type IV conjugative transfer system protein TraF VPUCM_RS03980 ee4209913e1387998ce3b043ad193480 314 SUPERFAMILY SSF52833 156 259 1.74E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS03980 ee4209913e1387998ce3b043ad193480 314 Pfam PF13728 F plasmid transfer operon protein 41 260 1.4E-76 T 22-04-2016 VPUCM_RS04850 4375c3b6509aaa73e656378e634fc08a 199 Pfam PF06185 YecM protein 14 196 9.1E-68 T 22-04-2016 IPR010393 Protein of unknown function DUF991 VPUCM_RS04850 4375c3b6509aaa73e656378e634fc08a 199 SUPERFAMILY SSF54593 2 197 1.49E-68 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS04850 4375c3b6509aaa73e656378e634fc08a 199 PANTHER PTHR37519 4 199 7.5E-84 T 22-04-2016 VPUCM_RS04850 4375c3b6509aaa73e656378e634fc08a 199 PANTHER PTHR37519:SF1 4 199 7.5E-84 T 22-04-2016 VPUCM_RS04850 4375c3b6509aaa73e656378e634fc08a 199 Gene3D G3DSA:3.10.180.10 3 198 3.7E-70 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 SUPERFAMILY SSF51905 480 531 6.16E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 SUPERFAMILY SSF51905 101 287 6.16E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 PIRSF PIRSF038984 1 536 5.6E-240 T 22-04-2016 IPR028348 FAD dependent protein VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 Gene3D G3DSA:3.50.50.60 474 531 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 Gene3D G3DSA:3.50.50.60 101 289 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 PANTHER PTHR10617:SF52 471 533 1.8E-179 T 22-04-2016 VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 PANTHER PTHR10617:SF52 76 391 1.8E-179 T 22-04-2016 VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 PANTHER PTHR10617 471 533 1.8E-179 T 22-04-2016 VPUCM_RS05415 228d3070ee8b65a3c5f280ffc031b72f 539 PANTHER PTHR10617 76 391 1.8E-179 T 22-04-2016 VPUCM_RS03205 34ff47fb5834fda018c4bc8f71cf743a 187 SUPERFAMILY SSF56925 28 187 2.88E-31 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS03205 34ff47fb5834fda018c4bc8f71cf743a 187 Gene3D G3DSA:2.40.160.20 15 187 1.2E-36 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS03205 34ff47fb5834fda018c4bc8f71cf743a 187 Pfam PF13505 Outer membrane protein beta-barrel domain 10 187 1.8E-25 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VPUCM_RS24100 068527a6c68f12edd27e88927a13fb1c 151 PANTHER PTHR11804 1 151 6.2E-85 T 22-04-2016 VPUCM_RS24100 068527a6c68f12edd27e88927a13fb1c 151 SUPERFAMILY SSF55486 1 151 1.12E-54 T 22-04-2016 VPUCM_RS24100 068527a6c68f12edd27e88927a13fb1c 151 Pfam PF01432 Peptidase family M3 1 151 9.7E-59 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VPUCM_RS24100 068527a6c68f12edd27e88927a13fb1c 151 PANTHER PTHR11804:SF8 1 151 6.2E-85 T 22-04-2016 VPUCM_RS24100 068527a6c68f12edd27e88927a13fb1c 151 Gene3D G3DSA:3.40.390.10 5 151 1.9E-59 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VPUCM_RS06805 483ff7c00b509ef36f1744801202176b 139 PANTHER PTHR23091 4 138 4.3E-15 T 22-04-2016 VPUCM_RS06805 483ff7c00b509ef36f1744801202176b 139 Gene3D G3DSA:3.40.630.30 1 135 3.1E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS06805 483ff7c00b509ef36f1744801202176b 139 Pfam PF00583 Acetyltransferase (GNAT) family 35 113 2.5E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS06805 483ff7c00b509ef36f1744801202176b 139 SUPERFAMILY SSF55729 6 137 3.19E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS00795 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 PANTHER PTHR12029:SF45 4 188 3.3E-65 T 22-04-2016 VPUCM_RS00795 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 PANTHER PTHR12029 4 188 3.3E-65 T 22-04-2016 VPUCM_RS00795 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 SUPERFAMILY SSF75217 4 173 5.76E-46 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VPUCM_RS00795 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Gene3D G3DSA:3.40.1280.10 2 175 3.1E-46 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VPUCM_RS00795 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 5.6E-25 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VPUCM_RS00795 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 7.9E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VPUCM_RS13870 571640a540beba907528517b61813a59 614 Gene3D G3DSA:1.10.443.10 262 398 2.5E-5 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS13870 571640a540beba907528517b61813a59 614 SUPERFAMILY SSF56349 261 418 1.0E-5 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS00830 25b4b38bc266da9b422f96ad7903882a 175 PANTHER PTHR30625:SF0 74 175 7.6E-23 T 22-04-2016 VPUCM_RS00830 25b4b38bc266da9b422f96ad7903882a 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 168 2.3E-20 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VPUCM_RS00830 25b4b38bc266da9b422f96ad7903882a 175 PANTHER PTHR30625 74 175 7.6E-23 T 22-04-2016 VPUCM_RS03810 ff0baf0aed37646922450cf137204397 255 Gene3D G3DSA:2.20.140.10 14 73 4.5E-5 T 22-04-2016 IPR008893 WGR domain VPUCM_RS08310 c7c9d2636b434f8b019073a917cc2db8 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.967 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VPUCM_RS08310 c7c9d2636b434f8b019073a917cc2db8 149 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 1.1E-68 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VPUCM_RS08310 c7c9d2636b434f8b019073a917cc2db8 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 3.0E-73 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VPUCM_RS02795 85834c91c1b7dbb4d73bf10977a720bb 278 SUPERFAMILY SSF55166 20 275 3.02E-97 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VPUCM_RS02795 85834c91c1b7dbb4d73bf10977a720bb 278 Pfam PF03411 Penicillin-insensitive murein endopeptidase 35 275 3.0E-95 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VPUCM_RS02795 85834c91c1b7dbb4d73bf10977a720bb 278 PIRSF PIRSF018455 2 278 4.1E-117 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VPUCM_RS02795 85834c91c1b7dbb4d73bf10977a720bb 278 Gene3D G3DSA:3.30.1380.10 20 276 1.1E-100 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VPUCM_RS09595 8597a61bcb9e0c985fae1d390c823544 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 81 7.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS09595 8597a61bcb9e0c985fae1d390c823544 262 SUPERFAMILY SSF46689 27 86 4.0E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS09595 8597a61bcb9e0c985fae1d390c823544 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 1.1E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS09595 8597a61bcb9e0c985fae1d390c823544 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 1.1E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VPUCM_RS09595 8597a61bcb9e0c985fae1d390c823544 262 Gene3D G3DSA:1.10.357.10 24 204 5.5E-22 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VPUCM_RS23650 76467fbf3e3eb2270ccf64d41f65ac3e 155 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 2 155 4.4E-52 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VPUCM_RS23650 76467fbf3e3eb2270ccf64d41f65ac3e 155 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 155 45.36 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VPUCM_RS23650 76467fbf3e3eb2270ccf64d41f65ac3e 155 SUPERFAMILY SSF52540 5 155 1.61E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS11045 523cc49164674873ea66a8ecce6df97a 212 Pfam PF01914 MarC family integral membrane protein 8 208 6.5E-64 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VPUCM_RS11045 523cc49164674873ea66a8ecce6df97a 212 PANTHER PTHR33508 2 211 1.1E-91 T 22-04-2016 VPUCM_RS11045 523cc49164674873ea66a8ecce6df97a 212 PANTHER PTHR33508:SF1 2 211 1.1E-91 T 22-04-2016 VPUCM_RS11045 523cc49164674873ea66a8ecce6df97a 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 204 4.4E-66 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VPUCM_RS04655 9507c76db0580affc2f7988ceaa7b261 280 PANTHER PTHR13773:SF0 1 280 5.0E-76 T 22-04-2016 VPUCM_RS04655 9507c76db0580affc2f7988ceaa7b261 280 PANTHER PTHR13773 1 280 5.0E-76 T 22-04-2016 VPUCM_RS04655 9507c76db0580affc2f7988ceaa7b261 280 Pfam PF01148 Cytidylyltransferase family 2 280 3.4E-70 T 22-04-2016 VPUCM_RS04655 9507c76db0580affc2f7988ceaa7b261 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 VPUCM_RS13855 aab1f22203b28f43e0d4f52c236f0540 593 PANTHER PTHR37292 1 588 1.0E-62 T 22-04-2016 VPUCM_RS13855 aab1f22203b28f43e0d4f52c236f0540 593 PANTHER PTHR37292:SF1 1 588 1.0E-62 T 22-04-2016 VPUCM_RS13855 aab1f22203b28f43e0d4f52c236f0540 593 Pfam PF03235 Protein of unknown function DUF262 8 257 3.2E-29 T 22-04-2016 IPR004919 Domain of unknown function DUF262 VPUCM_RS07905 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 3.7E-36 T 22-04-2016 IPR021343 Protein of unknown function DUF2960 VPUCM_RS10780 b64c9da87d887cfb722038c13faa78a1 322 Gene3D G3DSA:3.30.470.20 40 102 2.1E-6 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS10780 b64c9da87d887cfb722038c13faa78a1 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 320 3.3E-180 T 22-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein VPUCM_RS10780 b64c9da87d887cfb722038c13faa78a1 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 21 294 1.3E-115 T 22-04-2016 VPUCM_RS10780 b64c9da87d887cfb722038c13faa78a1 322 SUPERFAMILY SSF56059 36 186 7.69E-20 T 22-04-2016 VPUCM_RS10780 b64c9da87d887cfb722038c13faa78a1 322 SUPERFAMILY SSF56059 220 277 7.69E-20 T 22-04-2016 VPUCM_RS10780 b64c9da87d887cfb722038c13faa78a1 322 Gene3D G3DSA:3.30.470.20 162 202 3.5E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS10780 b64c9da87d887cfb722038c13faa78a1 322 Gene3D G3DSA:3.30.470.20 228 285 8.0E-6 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VPUCM_RS05035 63e442c765a252a224cc8991b472a4c4 361 Gene3D G3DSA:3.40.50.150 107 346 7.6E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS05035 63e442c765a252a224cc8991b472a4c4 361 PANTHER PTHR11746 1 281 8.3E-18 T 22-04-2016 VPUCM_RS05035 63e442c765a252a224cc8991b472a4c4 361 SUPERFAMILY SSF53335 107 347 7.07E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_RS05035 63e442c765a252a224cc8991b472a4c4 361 Pfam PF00891 O-methyltransferase 181 344 4.8E-12 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 VPUCM_RS05035 63e442c765a252a224cc8991b472a4c4 361 SUPERFAMILY SSF46785 25 105 8.85E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS05035 63e442c765a252a224cc8991b472a4c4 361 PIRSF PIRSF005739 8 353 1.7E-5 T 22-04-2016 IPR016461 O-methyltransferase COMT-type GO:0008168 VPUCM_RS01730 994099290e250bab959fe7266060c1da 859 PANTHER PTHR33362:SF1 1 351 1.3E-298 T 22-04-2016 VPUCM_RS01730 994099290e250bab959fe7266060c1da 859 PANTHER PTHR33362:SF1 427 752 1.3E-298 T 22-04-2016 VPUCM_RS01730 994099290e250bab959fe7266060c1da 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 667 2.2E-75 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VPUCM_RS01730 994099290e250bab959fe7266060c1da 859 PANTHER PTHR33362 1 351 1.3E-298 T 22-04-2016 VPUCM_RS01730 994099290e250bab959fe7266060c1da 859 PANTHER PTHR33362 427 752 1.3E-298 T 22-04-2016 VPUCM_RS01730 994099290e250bab959fe7266060c1da 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 728 1.1E-213 T 22-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein VPUCM_RS01730 994099290e250bab959fe7266060c1da 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 2.6E-70 T 22-04-2016 IPR021814 Protein of unknown function DUF3394 VPUCM_RS13810 6a6e4817298c5c7b284c5cb42bf6b226 149 Gene3D G3DSA:3.40.50.10110 1 146 8.3E-45 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VPUCM_RS13810 6a6e4817298c5c7b284c5cb42bf6b226 149 PANTHER PTHR38767 2 149 7.4E-57 T 22-04-2016 VPUCM_RS13810 6a6e4817298c5c7b284c5cb42bf6b226 149 SUPERFAMILY SSF102400 1 145 1.44E-41 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VPUCM_RS13810 6a6e4817298c5c7b284c5cb42bf6b226 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 1.3E-32 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VPUCM_RS01500 45105391f0f72787dbeb5ba6b8ee3184 130 SUPERFAMILY SSF56047 2 129 3.01E-44 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01500 45105391f0f72787dbeb5ba6b8ee3184 130 Gene3D G3DSA:3.30.1490.10 74 129 7.4E-29 T 22-04-2016 VPUCM_RS01500 45105391f0f72787dbeb5ba6b8ee3184 130 PANTHER PTHR11758 1 130 3.1E-58 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01500 45105391f0f72787dbeb5ba6b8ee3184 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.213 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01500 45105391f0f72787dbeb5ba6b8ee3184 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01500 45105391f0f72787dbeb5ba6b8ee3184 130 Gene3D G3DSA:3.30.1370.30 2 71 8.7E-25 T 22-04-2016 VPUCM_RS01500 45105391f0f72787dbeb5ba6b8ee3184 130 Pfam PF00410 Ribosomal protein S8 5 129 3.5E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 Gene3D G3DSA:2.30.330.10 47 136 5.7E-38 T 22-04-2016 VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 PANTHER PTHR22617 4 135 7.6E-35 T 22-04-2016 VPUCM_RS11560 991410c0da12b5697f6a38786f12faea 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.4E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VPUCM_RS03745 da1c96a5ca587d2788bb273a4d59e78d 139 Gene3D G3DSA:2.10.109.10 37 64 1.5E-13 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VPUCM_RS03745 da1c96a5ca587d2788bb273a4d59e78d 139 Gene3D G3DSA:2.10.109.10 103 139 1.5E-13 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VPUCM_RS03745 da1c96a5ca587d2788bb273a4d59e78d 139 ProSitePatterns PS00760 Signal peptidases I lysine active site. 56 68 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VPUCM_RS03745 da1c96a5ca587d2788bb273a4d59e78d 139 Pfam PF10502 Signal peptidase, peptidase S26 49 139 1.8E-15 T 22-04-2016 IPR019533 Peptidase S26 VPUCM_RS03745 da1c96a5ca587d2788bb273a4d59e78d 139 SUPERFAMILY SSF51306 41 139 2.62E-18 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VPUCM_RS11860 4d1a40ccfa32792050e9e5905a3cf681 167 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 4.4E-24 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 VPUCM_RS11860 4d1a40ccfa32792050e9e5905a3cf681 167 Gene3D G3DSA:3.10.129.10 12 157 1.2E-35 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS11860 4d1a40ccfa32792050e9e5905a3cf681 167 SUPERFAMILY SSF54637 10 156 2.13E-23 T 22-04-2016 IPR029069 HotDog domain VPUCM_RS06605 8d6fb781325606a7a73e51892672977d 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 8.8E-106 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VPUCM_RS06605 8d6fb781325606a7a73e51892672977d 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 7.4E-100 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VPUCM_RS06605 8d6fb781325606a7a73e51892672977d 428 PIRSF PIRSF006066 1 427 1.1E-74 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VPUCM_RS06605 8d6fb781325606a7a73e51892672977d 428 PANTHER PTHR33362 1 424 8.5E-241 T 22-04-2016 VPUCM_RS06605 8d6fb781325606a7a73e51892672977d 428 PANTHER PTHR33362:SF7 1 424 8.5E-241 T 22-04-2016 VPUCM_RS04535 43ae29fb40c640727fe1616ae5ccd96a 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 3.1E-73 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 VPUCM_RS01480 c9b332bb286f20030c1364bc18190d37 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.739 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01480 c9b332bb286f20030c1364bc18190d37 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site VPUCM_RS01480 c9b332bb286f20030c1364bc18190d37 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.9E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01480 c9b332bb286f20030c1364bc18190d37 123 SUPERFAMILY SSF50193 2 122 9.03E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01480 c9b332bb286f20030c1364bc18190d37 123 PANTHER PTHR11761 1 123 6.4E-77 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01480 c9b332bb286f20030c1364bc18190d37 123 SMART SM01374 1 123 3.3E-85 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VPUCM_RS01480 c9b332bb286f20030c1364bc18190d37 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 2.8E-58 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VPUCM_RS01480 c9b332bb286f20030c1364bc18190d37 123 Gene3D G3DSA:2.40.150.20 1 123 3.2E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VPUCM_RS14055 c0df892ac257d570f71c9f16565f7ceb 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14055 c0df892ac257d570f71c9f16565f7ceb 489 Gene3D G3DSA:2.40.50.140 30 128 3.6E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS14055 c0df892ac257d570f71c9f16565f7ceb 489 Pfam PF00575 S1 RNA binding domain 38 109 5.6E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 VPUCM_RS14055 c0df892ac257d570f71c9f16565f7ceb 489 PANTHER PTHR30001 1 489 2.0E-223 T 22-04-2016 VPUCM_RS14055 c0df892ac257d570f71c9f16565f7ceb 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.6E-104 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VPUCM_RS14055 c0df892ac257d570f71c9f16565f7ceb 489 SMART SM00316 37 122 5.8E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 VPUCM_RS14055 c0df892ac257d570f71c9f16565f7ceb 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.1E-173 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VPUCM_RS14410 018bc59427b683600d9776af7782a0ad 90 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 3.0E-37 T 22-04-2016 IPR022072 Protein of unknown function DUF3624 VPUCM_RS10975 3993fbfe7c39acc9fb96a23a3c873695 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 1.2E-64 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VPUCM_RS10975 3993fbfe7c39acc9fb96a23a3c873695 211 Pfam PF04205 FMN-binding domain 100 189 4.8E-20 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VPUCM_RS10975 3993fbfe7c39acc9fb96a23a3c873695 211 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 26.862 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VPUCM_RS10975 3993fbfe7c39acc9fb96a23a3c873695 211 PIRSF PIRSF006091 1 205 5.1E-78 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VPUCM_RS10975 3993fbfe7c39acc9fb96a23a3c873695 211 SMART SM00900 100 192 5.4E-34 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VPUCM_RS10975 3993fbfe7c39acc9fb96a23a3c873695 211 PANTHER PTHR36118 1 211 3.1E-74 T 22-04-2016 VPUCM_RS10975 3993fbfe7c39acc9fb96a23a3c873695 211 PANTHER PTHR36118:SF1 1 211 3.1E-74 T 22-04-2016 VPUCM_RS04735 dd43f7e9c5daacddabbe240b810566b1 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 9.1E-41 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 VPUCM_RS10190 5fd8f99665f8719953360cdea5f1292a 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.3E-37 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 VPUCM_RS05190 4d28a293a58a3d391774eb93af85c0c4 264 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 260 2.1E-84 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS05190 4d28a293a58a3d391774eb93af85c0c4 264 PANTHER PTHR10992:SF698 11 261 9.4E-42 T 22-04-2016 VPUCM_RS05190 4d28a293a58a3d391774eb93af85c0c4 264 PANTHER PTHR10992 11 261 9.4E-42 T 22-04-2016 VPUCM_RS05190 4d28a293a58a3d391774eb93af85c0c4 264 SUPERFAMILY SSF53474 16 261 1.46E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS05190 4d28a293a58a3d391774eb93af85c0c4 264 Gene3D G3DSA:3.40.50.1820 13 262 5.8E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS05190 4d28a293a58a3d391774eb93af85c0c4 264 Pfam PF12697 Alpha/beta hydrolase family 21 252 2.7E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS05190 4d28a293a58a3d391774eb93af85c0c4 264 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 14 260 33.455 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VPUCM_RS09480 546b4242953982811bb6c2076f49514b 342 SUPERFAMILY SSF53187 9 329 1.36E-77 T 22-04-2016 VPUCM_RS09480 546b4242953982811bb6c2076f49514b 342 Gene3D G3DSA:3.40.630.10 51 241 2.5E-9 T 22-04-2016 VPUCM_RS09480 546b4242953982811bb6c2076f49514b 342 PIRSF PIRSF017020 4 336 2.7E-127 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VPUCM_RS09480 546b4242953982811bb6c2076f49514b 342 PANTHER PTHR15162 1 334 3.9E-59 T 22-04-2016 VPUCM_RS09480 546b4242953982811bb6c2076f49514b 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 135.315 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VPUCM_RS09480 546b4242953982811bb6c2076f49514b 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 2.8E-70 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VPUCM_RS11060 495caa543dc916f9b0bab68867f1e808 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 5.0E-163 T 22-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VPUCM_RS11060 495caa543dc916f9b0bab68867f1e808 477 PANTHER PTHR33451:SF1 1 467 0.0 T 22-04-2016 VPUCM_RS11060 495caa543dc916f9b0bab68867f1e808 477 PANTHER PTHR33451 1 467 0.0 T 22-04-2016 VPUCM_RS11060 495caa543dc916f9b0bab68867f1e808 477 Pfam PF03553 Na+/H+ antiporter family 161 453 2.9E-66 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 SUPERFAMILY SSF50630 356 481 3.88E-10 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 SUPERFAMILY SSF50630 41 81 8.45E-22 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 SUPERFAMILY SSF50630 115 210 8.45E-22 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 PANTHER PTHR38037 498 625 7.5E-21 T 22-04-2016 VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 Pfam PF05618 Putative ATP-dependant zinc protease 498 619 6.6E-24 T 22-04-2016 VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 SUPERFAMILY SSF50630 218 339 1.91E-19 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 SUPERFAMILY SSF50630 490 616 9.15E-32 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 Gene3D G3DSA:2.40.70.10 215 333 2.6E-22 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 Gene3D G3DSA:2.40.70.10 356 448 2.2E-4 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 Gene3D G3DSA:2.40.70.10 121 202 3.0E-35 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 Gene3D G3DSA:2.40.70.10 490 609 2.2E-35 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS00755 ef3b6129874409ae291ec736f08f05b8 625 Gene3D G3DSA:2.40.70.10 38 87 3.0E-35 T 22-04-2016 IPR021109 Aspartic peptidase domain VPUCM_RS12790 69d594b398a3bc5d6b6ebd654cca1839 429 Pfam PF01551 Peptidase family M23 295 389 2.7E-31 T 22-04-2016 IPR016047 Peptidase M23 VPUCM_RS12790 69d594b398a3bc5d6b6ebd654cca1839 429 PANTHER PTHR21666:SF221 146 413 1.0E-134 T 22-04-2016 VPUCM_RS12790 69d594b398a3bc5d6b6ebd654cca1839 429 PANTHER PTHR21666 146 413 1.0E-134 T 22-04-2016 VPUCM_RS12790 69d594b398a3bc5d6b6ebd654cca1839 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 3.7E-5 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal VPUCM_RS12790 69d594b398a3bc5d6b6ebd654cca1839 429 SUPERFAMILY SSF51261 144 390 1.46E-71 T 22-04-2016 IPR011055 Duplicated hybrid motif VPUCM_RS12790 69d594b398a3bc5d6b6ebd654cca1839 429 Gene3D G3DSA:2.70.70.10 250 391 2.6E-45 T 22-04-2016 VPUCM_RS07110 641a2fd480a383f14ae2d1ce7775545f 324 Pfam PF13271 Domain of unknown function (DUF4062) 5 102 1.5E-17 T 22-04-2016 IPR025139 Domain of unknown function DUF4062 VPUCM_RS14895 33df1b110013ffe7bc7e82044398f948 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 4.6E-39 T 22-04-2016 IPR001107 Band 7 domain VPUCM_RS15135 5f1035162fe49cdf149bc85731be2cd6 447 PANTHER PTHR11785 1 441 1.1E-284 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS15135 5f1035162fe49cdf149bc85731be2cd6 447 PANTHER PTHR11785:SF332 1 441 1.1E-284 T 22-04-2016 VPUCM_RS15135 5f1035162fe49cdf149bc85731be2cd6 447 Pfam PF13520 Amino acid permease 8 421 1.3E-36 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS15135 5f1035162fe49cdf149bc85731be2cd6 447 PIRSF PIRSF006060 1 445 7.1E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VPUCM_RS01090 7bd75626c7bfff01e1b2aea344a14cc5 244 Pfam PF06251 Capsule biosynthesis GfcC 29 238 4.0E-24 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 VPUCM_RS11420 d265e78f5032af6b329bfb6c0685f981 439 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 439 5.6E-129 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_RS11420 d265e78f5032af6b329bfb6c0685f981 439 PANTHER PTHR35093:SF2 3 439 1.4E-148 T 22-04-2016 VPUCM_RS11420 d265e78f5032af6b329bfb6c0685f981 439 Gene3D G3DSA:2.40.160.60 26 439 2.9E-127 T 22-04-2016 VPUCM_RS11420 d265e78f5032af6b329bfb6c0685f981 439 SUPERFAMILY SSF56935 26 439 7.32E-100 T 22-04-2016 VPUCM_RS11420 d265e78f5032af6b329bfb6c0685f981 439 PANTHER PTHR35093 3 439 1.4E-148 T 22-04-2016 VPUCM_RS07505 3ce1e2822c7105098e7b519675d19132 476 Pfam PF01943 Polysaccharide biosynthesis protein 7 268 9.7E-12 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VPUCM_RS01180 35c17de3e7b3ee3612805c83755ab454 175 Gene3D G3DSA:3.30.70.60 83 166 5.5E-4 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VPUCM_RS11350 9401e1a5b88b34abae02b1bf3d708929 87 Pfam PF08891 YfcL protein 4 84 2.3E-32 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL VPUCM_RS15210 7757fed13fa230a9ee3c6bd530074762 163 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 153 4.3E-55 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VPUCM_RS15210 7757fed13fa230a9ee3c6bd530074762 163 PIRSF PIRSF016548 3 163 3.0E-70 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VPUCM_RS04275 96e1e038a85c77698654d9ea6da27a9b 394 Pfam PF05940 NnrS protein 16 388 4.3E-109 T 22-04-2016 IPR010266 NnrS VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 52 748 6.6E-126 T 22-04-2016 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 Pfam PF14522 Cytochrome c7 and related cytochrome c 647 736 9.5E-6 T 22-04-2016 VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 SUPERFAMILY SSF48695 192 398 6.27E-36 T 22-04-2016 IPR011031 Multihaem cytochrome VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 SUPERFAMILY SSF48695 520 736 6.27E-36 T 22-04-2016 IPR011031 Multihaem cytochrome VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 Gene3D G3DSA:3.90.10.10 580 615 6.9E-20 T 22-04-2016 VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 Gene3D G3DSA:3.90.10.10 292 345 6.9E-20 T 22-04-2016 VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 Gene3D G3DSA:3.90.10.10 508 509 6.9E-20 T 22-04-2016 VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 Gene3D G3DSA:3.90.10.10 214 246 6.9E-20 T 22-04-2016 VPUCM_RS09920 0dd9501c5982e9a714f5b91fee39b32a 754 Gene3D G3DSA:3.90.10.10 643 740 1.9E-4 T 22-04-2016 VPUCM_RS18080 9762d9673cebe76b36c34f188014d953 113 PANTHER PTHR30603 18 104 1.8E-16 T 22-04-2016 VPUCM_RS18080 9762d9673cebe76b36c34f188014d953 113 PANTHER PTHR30603:SF0 18 104 1.8E-16 T 22-04-2016 VPUCM_RS18080 9762d9673cebe76b36c34f188014d953 113 Pfam PF03979 Sigma-70 factor, region 1.1 23 99 6.4E-30 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VPUCM_RS10380 36c740a2b8a8b29450909dfee69d36fc 350 PANTHER PTHR35008:SF4 23 342 9.4E-91 T 22-04-2016 VPUCM_RS10380 36c740a2b8a8b29450909dfee69d36fc 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 301 8.2E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10380 36c740a2b8a8b29450909dfee69d36fc 350 SUPERFAMILY SSF46626 208 312 2.76E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10380 36c740a2b8a8b29450909dfee69d36fc 350 Gene3D G3DSA:1.10.760.10 49 160 1.3E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10380 36c740a2b8a8b29450909dfee69d36fc 350 SUPERFAMILY SSF46626 54 164 1.01E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS10380 36c740a2b8a8b29450909dfee69d36fc 350 PANTHER PTHR35008 23 342 9.4E-91 T 22-04-2016 VPUCM_RS10380 36c740a2b8a8b29450909dfee69d36fc 350 Gene3D G3DSA:1.10.760.10 213 306 1.3E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VPUCM_RS03795 9177c567e7fc724f85bef913878a3d68 272 Pfam PF03837 RecT family 39 193 7.4E-23 T 22-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 VPUCM_RS03795 9177c567e7fc724f85bef913878a3d68 272 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 15 189 5.0E-25 T 22-04-2016 IPR010183 Bacteriophage lambda, Bet VPUCM_RS06105 49638fc20174251d9f3f66452c0d42e7 533 Pfam PF03553 Na+/H+ antiporter family 165 497 1.4E-108 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VPUCM_RS06105 49638fc20174251d9f3f66452c0d42e7 533 PANTHER PTHR33451:SF7 1 531 2.7E-217 T 22-04-2016 VPUCM_RS06105 49638fc20174251d9f3f66452c0d42e7 533 PANTHER PTHR33451 1 531 2.7E-217 T 22-04-2016 VPUCM_RS07580 ad37586db4fd61e6293aa9e73b4abfef 288 PANTHER PTHR12149 1 286 8.2E-114 T 22-04-2016 VPUCM_RS07580 ad37586db4fd61e6293aa9e73b4abfef 288 Gene3D G3DSA:3.30.200.20 31 90 8.9E-5 T 22-04-2016 VPUCM_RS07580 ad37586db4fd61e6293aa9e73b4abfef 288 Gene3D G3DSA:3.90.1200.10 99 249 5.1E-10 T 22-04-2016 VPUCM_RS07580 ad37586db4fd61e6293aa9e73b4abfef 288 PIRSF PIRSF006221 1 288 6.8E-109 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VPUCM_RS07580 ad37586db4fd61e6293aa9e73b4abfef 288 PANTHER PTHR12149:SF8 1 286 8.2E-114 T 22-04-2016 VPUCM_RS07580 ad37586db4fd61e6293aa9e73b4abfef 288 Pfam PF03881 Fructosamine kinase 1 286 2.0E-125 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VPUCM_RS07580 ad37586db4fd61e6293aa9e73b4abfef 288 SUPERFAMILY SSF56112 3 282 3.64E-44 T 22-04-2016 IPR011009 Protein kinase-like domain VPUCM_RS14375 f484a41fe851f04b60c2c07e900d13d8 171 PIRSF PIRSF016481 1 171 6.8E-52 T 22-04-2016 IPR007446 Pilus assembly protein PilP VPUCM_RS14375 f484a41fe851f04b60c2c07e900d13d8 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 2.4E-41 T 22-04-2016 IPR007446 Pilus assembly protein PilP VPUCM_RS05330 b988c6915c140fb08fbc510be50a8e52 207 Pfam PF08722 TnsA endonuclease N terminal 44 110 1.8E-8 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal VPUCM_RS03755 975e5b54a8df67a4283e117497ff52e2 342 Pfam PF06834 TraU protein 43 339 1.6E-102 T 22-04-2016 IPR009649 TraU VPUCM_RS01270 d38cde90f6edc42488e893e138e5cf48 264 Pfam PF00793 DAHP synthetase I family 2 253 4.0E-57 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VPUCM_RS01270 d38cde90f6edc42488e893e138e5cf48 264 PANTHER PTHR21057 1 264 2.7E-135 T 22-04-2016 VPUCM_RS01270 d38cde90f6edc42488e893e138e5cf48 264 SUPERFAMILY SSF51569 1 257 1.37E-96 T 22-04-2016 VPUCM_RS01270 d38cde90f6edc42488e893e138e5cf48 264 Gene3D G3DSA:3.20.20.70 1 258 5.8E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VPUCM_RS01270 d38cde90f6edc42488e893e138e5cf48 264 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 1 255 3.2E-111 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VPUCM_RS01270 d38cde90f6edc42488e893e138e5cf48 264 PANTHER PTHR21057:SF2 1 264 2.7E-135 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 3.3E-16 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 Gene3D G3DSA:1.10.10.10 2 97 9.0E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 SMART SM00418 15 93 5.2E-28 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PANTHER PTHR33154 1 96 6.9E-29 T 22-04-2016 VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 SUPERFAMILY SSF46785 9 96 2.92E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VPUCM_RS02595 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PANTHER PTHR33154:SF10 1 96 6.9E-29 T 22-04-2016 VPUCM_RS13755 9f4c0aa083475385469e06a2e1a4b36d 223 Pfam PF08887 GAD-like domain 5 106 2.2E-34 T 22-04-2016 IPR014983 GAD-related VPUCM_RS13755 9f4c0aa083475385469e06a2e1a4b36d 223 Pfam PF08906 Domain of unknown function (DUF1851) 132 202 4.6E-7 T 22-04-2016 IPR015002 Domain of unknown function DUF1851 VPUCM_RS11570 d322587f86365bd32cf0bffb1f54e0e2 167 PANTHER PTHR35091:SF1 1 167 6.6E-61 T 22-04-2016 VPUCM_RS11570 d322587f86365bd32cf0bffb1f54e0e2 167 PANTHER PTHR35091 1 167 6.6E-61 T 22-04-2016 VPUCM_RS11570 d322587f86365bd32cf0bffb1f54e0e2 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 2.3E-19 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 PANTHER PTHR11019:SF11 138 241 6.8E-29 T 22-04-2016 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 207 222 4.6E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 238 4.6E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 Pfam PF12833 Helix-turn-helix domain 161 240 4.3E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 SUPERFAMILY SSF46689 191 240 2.73E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 Gene3D G3DSA:1.10.10.60 140 191 6.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 SMART SM00342 154 238 6.9E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 Gene3D G3DSA:1.10.10.60 192 240 6.2E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 234 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 PANTHER PTHR11019 138 241 6.8E-29 T 22-04-2016 VPUCM_RS04115 96d94b9d3f8d056e454563404a4399c5 241 SUPERFAMILY SSF46689 142 187 1.66E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS17810 2fbf602d9beeb42dbdf40860aeee0457 119 PANTHER PTHR11702 1 119 2.3E-51 T 22-04-2016 VPUCM_RS17810 2fbf602d9beeb42dbdf40860aeee0457 119 SUPERFAMILY SSF82051 2 119 1.19E-41 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VPUCM_RS17810 2fbf602d9beeb42dbdf40860aeee0457 119 Pfam PF01018 GTP1/OBG 3 119 1.4E-43 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VPUCM_RS17810 2fbf602d9beeb42dbdf40860aeee0457 119 PANTHER PTHR11702:SF3 1 119 2.3E-51 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VPUCM_RS17810 2fbf602d9beeb42dbdf40860aeee0457 119 Gene3D G3DSA:2.70.210.12 2 119 1.3E-43 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VPUCM_RS03940 3a194ab6a54e8fc887c358780f080593 323 Gene3D G3DSA:3.30.2010.10 72 161 3.2E-23 T 22-04-2016 VPUCM_RS03940 3a194ab6a54e8fc887c358780f080593 323 PANTHER PTHR10120 8 303 2.9E-64 T 22-04-2016 VPUCM_RS03940 3a194ab6a54e8fc887c358780f080593 323 PANTHER PTHR10120:SF19 8 303 2.9E-64 T 22-04-2016 VPUCM_RS03940 3a194ab6a54e8fc887c358780f080593 323 Pfam PF01435 Peptidase family M48 79 283 2.6E-31 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 PANTHER PTHR35333 22 278 5.2E-64 T 22-04-2016 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 Pfam PF13354 Beta-lactamase enzyme family 44 251 5.0E-32 T 22-04-2016 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 25 49 8.9E-45 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 195 210 8.9E-45 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 133 157 8.9E-45 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 212 227 8.9E-45 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 97 122 8.9E-45 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 159 184 8.9E-45 T 22-04-2016 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 ProSitePatterns PS00146 Beta-lactamase class-A active site. 57 72 - T 22-04-2016 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 PANTHER PTHR35333:SF2 22 278 5.2E-64 T 22-04-2016 VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 Gene3D G3DSA:3.40.710.10 22 279 1.3E-88 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS13850 4a26d87416daa37863dd80afe0edf2b7 282 SUPERFAMILY SSF56601 20 279 1.08E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VPUCM_RS09890 b030d65577f48046171046453b839893 817 PANTHER PTHR30489:SF6 215 816 3.8E-287 T 22-04-2016 VPUCM_RS09890 b030d65577f48046171046453b839893 817 PANTHER PTHR30489:SF6 1 186 3.8E-287 T 22-04-2016 VPUCM_RS09890 b030d65577f48046171046453b839893 817 PANTHER PTHR30489 215 816 3.8E-287 T 22-04-2016 VPUCM_RS09890 b030d65577f48046171046453b839893 817 PANTHER PTHR30489 1 186 3.8E-287 T 22-04-2016 VPUCM_RS09890 b030d65577f48046171046453b839893 817 Pfam PF12704 MacB-like periplasmic core domain 466 657 5.4E-7 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VPUCM_RS09890 b030d65577f48046171046453b839893 817 Pfam PF02687 FtsX-like permease family 693 809 1.1E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VPUCM_RS09890 b030d65577f48046171046453b839893 817 Pfam PF02687 FtsX-like permease family 244 368 5.4E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VPUCM_RS12755 6180f53bffc1aeac42b4b47a71b0fc56 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 175 8.4E-42 T 22-04-2016 IPR021768 Protein of unknown function DUF3332 VPUCM_RS19440 0f3aa1309ed31e52408cea6cea91105d 81 Gene3D G3DSA:3.30.300.70 1 59 1.2E-27 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VPUCM_RS19440 0f3aa1309ed31e52408cea6cea91105d 81 SUPERFAMILY SSF75420 1 62 1.83E-22 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VPUCM_RS19440 0f3aa1309ed31e52408cea6cea91105d 81 PANTHER PTHR33867 1 81 5.9E-36 T 22-04-2016 VPUCM_RS19440 0f3aa1309ed31e52408cea6cea91105d 81 Pfam PF02576 Putative ribosome maturation factor RimP 1 81 4.5E-34 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VPUCM_RS19440 0f3aa1309ed31e52408cea6cea91105d 81 PANTHER PTHR33867:SF1 1 81 5.9E-36 T 22-04-2016 VPUCM_RS04190 41980df8a2bba24002928d28109bcba4 370 Pfam PF14378 PAP2 superfamily 146 354 8.9E-42 T 22-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 VPUCM_RS01330 45de023474a7c59e9d5ba9f09e00c776 410 SUPERFAMILY SSF53756 4 390 1.53E-53 T 22-04-2016 VPUCM_RS01330 45de023474a7c59e9d5ba9f09e00c776 410 Pfam PF00534 Glycosyl transferases group 1 232 387 3.5E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS01330 45de023474a7c59e9d5ba9f09e00c776 410 Gene3D G3DSA:3.40.50.2000 229 388 6.5E-18 T 22-04-2016 VPUCM_RS01330 45de023474a7c59e9d5ba9f09e00c776 410 Pfam PF13439 Glycosyltransferase Family 4 19 215 1.6E-15 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VPUCM_RS01330 45de023474a7c59e9d5ba9f09e00c776 410 PANTHER PTHR12526 6 156 1.2E-35 T 22-04-2016 VPUCM_RS01330 45de023474a7c59e9d5ba9f09e00c776 410 PANTHER PTHR12526 176 409 1.2E-35 T 22-04-2016 VPUCM_RS04130 1e8e0a2cfbdb1bdff5b0627a88ca5601 437 SMART SM00382 166 357 0.0039 T 22-04-2016 IPR003593 AAA+ ATPase domain VPUCM_RS04130 1e8e0a2cfbdb1bdff5b0627a88ca5601 437 Gene3D G3DSA:3.40.50.300 144 200 4.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04130 1e8e0a2cfbdb1bdff5b0627a88ca5601 437 Gene3D G3DSA:3.40.50.300 254 371 4.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04130 1e8e0a2cfbdb1bdff5b0627a88ca5601 437 SUPERFAMILY SSF52540 244 424 8.07E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS04130 1e8e0a2cfbdb1bdff5b0627a88ca5601 437 SUPERFAMILY SSF52540 147 193 8.07E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS01980 823c4b397113c6e1fa601d3f63bf21fb 349 Pfam PF14321 Domain of unknown function (DUF4382) 32 200 1.2E-20 T 22-04-2016 IPR025491 Domain of unknown function DUF4382 VPUCM_RS14080 8fd509fb85a18a9c36b53dfea1671cfa 1443 Gene3D G3DSA:2.60.120.200 478 740 2.2E-16 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VPUCM_RS14080 8fd509fb85a18a9c36b53dfea1671cfa 1443 SUPERFAMILY SSF49899 474 739 4.06E-23 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VPUCM_RS02810 7d75e6e67593e8daed9b444d9b7b6979 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS02810 7d75e6e67593e8daed9b444d9b7b6979 466 PANTHER PTHR30217 2 211 2.3E-235 T 22-04-2016 VPUCM_RS02810 7d75e6e67593e8daed9b444d9b7b6979 466 PANTHER PTHR30217 258 466 2.3E-235 T 22-04-2016 VPUCM_RS02810 7d75e6e67593e8daed9b444d9b7b6979 466 Pfam PF01136 Peptidase family U32 80 355 2.9E-96 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS02810 7d75e6e67593e8daed9b444d9b7b6979 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 3.0E-21 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VPUCM_RS02810 7d75e6e67593e8daed9b444d9b7b6979 466 PANTHER PTHR30217:SF6 2 211 2.3E-235 T 22-04-2016 VPUCM_RS02810 7d75e6e67593e8daed9b444d9b7b6979 466 PANTHER PTHR30217:SF6 258 466 2.3E-235 T 22-04-2016 VPUCM_RS11760 9d53c7e34289cbe9ae306640d701d50d 417 PANTHER PTHR11119:SF49 1 414 1.2E-172 T 22-04-2016 VPUCM_RS11760 9d53c7e34289cbe9ae306640d701d50d 417 Pfam PF00860 Permease family 3 371 3.0E-91 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS11760 9d53c7e34289cbe9ae306640d701d50d 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VPUCM_RS11760 9d53c7e34289cbe9ae306640d701d50d 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 1.1E-110 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VPUCM_RS11760 9d53c7e34289cbe9ae306640d701d50d 417 PANTHER PTHR11119 1 414 1.2E-172 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VPUCM_RS04135 48e54ccb3c849bd554a11b3b5bb03630 251 Pfam PF08666 SAF domain 45 105 4.5E-9 T 22-04-2016 IPR013974 SAF domain VPUCM_RS04135 48e54ccb3c849bd554a11b3b5bb03630 251 SMART SM00858 44 106 1.1E-8 T 22-04-2016 IPR013974 SAF domain VPUCM_RS04135 48e54ccb3c849bd554a11b3b5bb03630 251 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 245 1.3E-73 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB VPUCM_RS04135 48e54ccb3c849bd554a11b3b5bb03630 251 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 216 5.4E-30 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VPUCM_RS11850 3ef3128db6b17e3e51d02feb5ab367d0 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 4.7E-19 T 22-04-2016 IPR021249 Protein of unknown function DUF2788 VPUCM_RS12815 008064e014d7ffd25f66525b32f61cde 361 Pfam PF01594 Domain of unknown function DUF20 14 347 2.6E-54 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VPUCM_RS12815 008064e014d7ffd25f66525b32f61cde 361 PANTHER PTHR21716 9 361 7.1E-104 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VPUCM_RS12815 008064e014d7ffd25f66525b32f61cde 361 PANTHER PTHR21716:SF13 9 361 7.1E-104 T 22-04-2016 VPUCM_RS02465 d71ae00478059b9d5dd8d7814ba99b2c 183 Gene3D G3DSA:1.20.120.520 2 149 1.2E-15 T 22-04-2016 VPUCM_RS02465 d71ae00478059b9d5dd8d7814ba99b2c 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 1.5E-15 T 22-04-2016 IPR012312 Haemerythrin-like VPUCM_RS08220 0a87431a4d2ca82fce5ad6a9ad1ee8ad 108 Pfam PF07459 CTX phage RstB protein 7 101 5.9E-17 T 22-04-2016 IPR010008 Vibrio phage CTX, RstB VPUCM_RS02045 335274d6595e590ccbb2a8f5e1f738fa 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 7.3E-75 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VPUCM_RS02045 335274d6595e590ccbb2a8f5e1f738fa 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 2.0E-73 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VPUCM_RS02045 335274d6595e590ccbb2a8f5e1f738fa 267 PANTHER PTHR30622:SF4 1 265 6.6E-129 T 22-04-2016 VPUCM_RS02045 335274d6595e590ccbb2a8f5e1f738fa 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.561 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VPUCM_RS02045 335274d6595e590ccbb2a8f5e1f738fa 267 PANTHER PTHR30622 1 265 6.6E-129 T 22-04-2016 VPUCM_RS11750 583f15fb8123d3b3943783e8bc8d0788 147 Pfam PF09842 Predicted membrane protein (DUF2069) 21 123 1.4E-33 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane VPUCM_RS12540 cd42f446f0a8334754d99fcb3cde1e0f 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 188 5.2E-36 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT VPUCM_RS12540 cd42f446f0a8334754d99fcb3cde1e0f 200 PANTHER PTHR33545 1 198 2.1E-68 T 22-04-2016 VPUCM_RS06765 4985a7ba654541584f4fbb78c2c3aed9 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.6E-73 T 22-04-2016 IPR021334 Protein of unknown function DUF2947 VPUCM_RS03750 abb51e467cc04f9a60e49ac868af12b5 374 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 74 166 9.5E-22 T 22-04-2016 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC VPUCM_RS01255 33d777199b4a374857eb6af09e94e1c2 583 Pfam PF05159 Capsule polysaccharide biosynthesis protein 221 365 4.0E-14 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 VPUCM_RS19020 d207829072573cffdc3ca6eb1112a5b1 93 SUPERFAMILY SSF50494 10 58 8.89E-5 T 22-04-2016 IPR009003 Peptidase S1, PA clan VPUCM_RS19020 d207829072573cffdc3ca6eb1112a5b1 93 Gene3D G3DSA:2.40.10.10 9 74 1.5E-5 T 22-04-2016 VPUCM_RS03310 4eafb56d3cecbedaa78da320492b8518 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS03310 4eafb56d3cecbedaa78da320492b8518 147 Pfam PF13633 Prokaryotic N-terminal methylation site 16 42 2.4E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS03310 4eafb56d3cecbedaa78da320492b8518 147 SUPERFAMILY SSF54523 19 130 6.75E-18 T 22-04-2016 VPUCM_RS03310 4eafb56d3cecbedaa78da320492b8518 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 1.7E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VPUCM_RS03310 4eafb56d3cecbedaa78da320492b8518 147 PANTHER PTHR30093 1 67 8.8E-16 T 22-04-2016 VPUCM_RS03310 4eafb56d3cecbedaa78da320492b8518 147 Gene3D G3DSA:3.30.700.10 20 121 3.9E-14 T 22-04-2016 VPUCM_RS11265 1659556be09b1df1311e55d41522c9f4 134 PANTHER PTHR35813 1 131 2.3E-41 T 22-04-2016 VPUCM_RS11265 1659556be09b1df1311e55d41522c9f4 134 PIRSF PIRSF016789 8 129 1.3E-41 T 22-04-2016 IPR007401 Protein of unknown function DUF454 VPUCM_RS11265 1659556be09b1df1311e55d41522c9f4 134 Pfam PF04304 Protein of unknown function (DUF454) 9 122 7.2E-38 T 22-04-2016 IPR007401 Protein of unknown function DUF454 VPUCM_RS11265 1659556be09b1df1311e55d41522c9f4 134 PANTHER PTHR35813:SF1 1 131 2.3E-41 T 22-04-2016 VPUCM_RS01150 b4b137507b1688893afae67b969970ac 400 Pfam PF00482 Type II secretion system (T2SS), protein F 272 390 4.1E-18 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS01150 b4b137507b1688893afae67b969970ac 400 Pfam PF00482 Type II secretion system (T2SS), protein F 69 190 1.3E-23 T 22-04-2016 IPR018076 Type II secretion system F domain VPUCM_RS01150 b4b137507b1688893afae67b969970ac 400 PANTHER PTHR30012 7 399 1.4E-92 T 22-04-2016 VPUCM_RS01150 b4b137507b1688893afae67b969970ac 400 PANTHER PTHR30012:SF0 7 399 1.4E-92 T 22-04-2016 VPUCM_RS01150 b4b137507b1688893afae67b969970ac 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 2.9E-13 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS01150 b4b137507b1688893afae67b969970ac 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 364 378 2.9E-13 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS01150 b4b137507b1688893afae67b969970ac 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 399 2.9E-13 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS01150 b4b137507b1688893afae67b969970ac 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 63 75 2.9E-13 T 22-04-2016 IPR003004 GspF/PilC family VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 Gene3D G3DSA:1.10.101.10 211 285 8.3E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 SUPERFAMILY SSF47090 206 285 4.0E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 PANTHER PTHR41533:SF1 54 528 1.3E-109 T 22-04-2016 VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 SUPERFAMILY SSF141523 303 357 6.8E-20 T 22-04-2016 VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 SUPERFAMILY SSF141523 413 464 6.8E-20 T 22-04-2016 VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 Pfam PF03734 L,D-transpeptidase catalytic domain 304 470 4.1E-30 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 PANTHER PTHR41533 54 528 1.3E-109 T 22-04-2016 VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 Gene3D G3DSA:2.40.440.10 298 348 3.7E-12 T 22-04-2016 VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 Gene3D G3DSA:2.40.440.10 415 464 3.7E-12 T 22-04-2016 VPUCM_RS06570 ddc666185e3bd362d9ac0b42648f4c41 529 Pfam PF01471 Putative peptidoglycan binding domain 245 276 4.7E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.7E-85 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 PANTHER PTHR30071 1 224 2.3E-90 T 22-04-2016 VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 Pfam PF01578 Cytochrome C assembly protein 29 184 1.5E-32 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS11460 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VPUCM_RS07355 909b456e3e4103d88499aebb0f67ed20 123 Gene3D G3DSA:3.40.630.30 9 97 2.2E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS07355 909b456e3e4103d88499aebb0f67ed20 123 Pfam PF00583 Acetyltransferase (GNAT) family 28 97 1.1E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS07355 909b456e3e4103d88499aebb0f67ed20 123 SUPERFAMILY SSF55729 5 97 4.4E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS13090 6c8392dd3201ac22e233d59fdc5620cf 264 Pfam PF01578 Cytochrome C assembly protein 39 262 1.2E-45 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VPUCM_RS13090 6c8392dd3201ac22e233d59fdc5620cf 264 PANTHER PTHR38034 3 264 6.8E-98 T 22-04-2016 VPUCM_RS06840 b30e0df47342102089c2c85ef4a019b5 297 Pfam PF14491 Protein of unknown function (DUF4435) 29 181 7.5E-18 T 22-04-2016 IPR029492 Domain of unknown function DUF4435 VPUCM_RS05310 b5f00cc08e6763c983f26c33f415e1a8 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 136 6.1E-44 T 22-04-2016 VPUCM_RS05310 b5f00cc08e6763c983f26c33f415e1a8 144 PANTHER PTHR38013 1 144 2.6E-45 T 22-04-2016 VPUCM_RS01685 4d69c34306956ab89094b810345789c1 120 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 7.2E-19 T 22-04-2016 IPR021242 Protein of unknown function DUF2799 VPUCM_RS02950 a2db7c719c92a21cc79a780a133f6094 127 SUPERFAMILY SSF82649 1 125 4.97E-48 T 22-04-2016 VPUCM_RS02950 a2db7c719c92a21cc79a780a133f6094 127 PANTHER PTHR10093:SF3 1 127 2.6E-101 T 22-04-2016 VPUCM_RS02950 a2db7c719c92a21cc79a780a133f6094 127 Gene3D G3DSA:3.90.1010.10 2 126 2.1E-56 T 22-04-2016 VPUCM_RS02950 a2db7c719c92a21cc79a780a133f6094 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.1E-69 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 VPUCM_RS02950 a2db7c719c92a21cc79a780a133f6094 127 Pfam PF01592 NifU-like N terminal domain 2 126 2.2E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 VPUCM_RS02950 a2db7c719c92a21cc79a780a133f6094 127 PANTHER PTHR10093 1 127 2.6E-101 T 22-04-2016 VPUCM_RS11725 6ad5deff04bc83d5cfdf43927cea1144 356 PANTHER PTHR21716:SF19 7 352 7.3E-147 T 22-04-2016 VPUCM_RS11725 6ad5deff04bc83d5cfdf43927cea1144 356 PANTHER PTHR21716 7 352 7.3E-147 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VPUCM_RS11725 6ad5deff04bc83d5cfdf43927cea1144 356 Pfam PF01594 Domain of unknown function DUF20 20 345 1.9E-76 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VPUCM_RS04125 4517aafddbbcf1a10149c47ec45ac22e 162 Pfam PF01478 Type IV leader peptidase family 5 107 7.7E-17 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VPUCM_RS03565 45767274d9d6ade513d3e3f5637075fe 253 PANTHER PTHR30007 1 252 1.6E-99 T 22-04-2016 VPUCM_RS03565 45767274d9d6ade513d3e3f5637075fe 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 77 1.6E-24 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family VPUCM_RS03565 45767274d9d6ade513d3e3f5637075fe 253 PANTHER PTHR30007:SF21 1 252 1.6E-99 T 22-04-2016 VPUCM_RS03565 45767274d9d6ade513d3e3f5637075fe 253 Pfam PF01609 Transposase DDE domain 91 246 5.3E-22 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VPUCM_RS01645 a40b0bc284676f6c0717831a2d0e4745 204 Pfam PF10986 Protein of unknown function (DUF2796) 29 199 4.1E-53 T 22-04-2016 IPR021253 Protein of unknown function DUF2796 VPUCM_RS07845 bd26971d30a0b4d0c6c36bbe321a2a9e 283 PANTHER PTHR38095 2 282 3.5E-55 T 22-04-2016 VPUCM_RS07845 bd26971d30a0b4d0c6c36bbe321a2a9e 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 276 6.3E-52 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 VPUCM_RS07845 bd26971d30a0b4d0c6c36bbe321a2a9e 283 PANTHER PTHR38095:SF1 2 282 3.5E-55 T 22-04-2016 VPUCM_RS09630 2959621ac9b8604d68245f3f11f8d55b 331 Pfam PF11383 Protein of unknown function (DUF3187) 6 320 1.1E-133 T 22-04-2016 IPR021523 Protein of unknown function DUF3187 VPUCM_RS11070 20bb0ea64db33ae7c2f83b0d986c8332 429 SUPERFAMILY SSF47226 309 422 2.09E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS11070 20bb0ea64db33ae7c2f83b0d986c8332 429 Gene3D G3DSA:1.20.120.160 308 415 1.3E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS11070 20bb0ea64db33ae7c2f83b0d986c8332 429 Pfam PF01627 Hpt domain 333 409 7.0E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS06050 8cb3c2baf009f31aa0ecd228affedc8a 272 Pfam PF07103 Protein of unknown function (DUF1365) 9 245 6.6E-70 T 22-04-2016 IPR010775 Protein of unknown function DUF1365 VPUCM_RS06050 8cb3c2baf009f31aa0ecd228affedc8a 272 PANTHER PTHR33973 7 254 2.3E-69 T 22-04-2016 VPUCM_RS15480 7dbd13d0cf427e2670a09038cb1c5e88 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 2.5E-24 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 VPUCM_RS02075 a87e59e649edb2d90d5333c6e908141a 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 4.0E-67 T 22-04-2016 IPR002727 Protein of unknown function DUF47 VPUCM_RS02075 a87e59e649edb2d90d5333c6e908141a 226 Pfam PF01865 Protein of unknown function DUF47 7 223 2.0E-65 T 22-04-2016 IPR018445 Putative phosphate transport regulator VPUCM_RS02075 a87e59e649edb2d90d5333c6e908141a 226 PANTHER PTHR36536:SF3 1 226 2.8E-137 T 22-04-2016 VPUCM_RS02075 a87e59e649edb2d90d5333c6e908141a 226 SUPERFAMILY SSF109755 29 216 1.19E-15 T 22-04-2016 VPUCM_RS02075 a87e59e649edb2d90d5333c6e908141a 226 PANTHER PTHR36536 1 226 2.8E-137 T 22-04-2016 VPUCM_RS02830 64cf3be6e2bf37b712707fcac2d7f134 319 Pfam PF12849 PBP superfamily domain 34 291 3.8E-29 T 22-04-2016 IPR024370 PBP domain VPUCM_RS02830 64cf3be6e2bf37b712707fcac2d7f134 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 7 305 2.2E-76 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 VPUCM_RS02830 64cf3be6e2bf37b712707fcac2d7f134 319 SUPERFAMILY SSF53850 38 316 2.69E-65 T 22-04-2016 VPUCM_RS02830 64cf3be6e2bf37b712707fcac2d7f134 319 Gene3D G3DSA:3.40.190.10 40 117 3.1E-5 T 22-04-2016 VPUCM_RS02830 64cf3be6e2bf37b712707fcac2d7f134 319 Gene3D G3DSA:3.40.190.10 263 314 3.1E-5 T 22-04-2016 VPUCM_RS02830 64cf3be6e2bf37b712707fcac2d7f134 319 PANTHER PTHR30570:SF5 12 317 1.7E-156 T 22-04-2016 VPUCM_RS02830 64cf3be6e2bf37b712707fcac2d7f134 319 Gene3D G3DSA:3.40.190.10 120 262 6.2E-34 T 22-04-2016 VPUCM_RS02830 64cf3be6e2bf37b712707fcac2d7f134 319 PANTHER PTHR30570 12 317 1.7E-156 T 22-04-2016 VPUCM_RS11590 6f494a3b5b3456a8c4958fe79f7cce70 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 5.9E-36 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VPUCM_RS11590 6f494a3b5b3456a8c4958fe79f7cce70 266 PRINTS PR01003 Flagellar assembly protein FliH signature 104 122 6.7E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VPUCM_RS11590 6f494a3b5b3456a8c4958fe79f7cce70 266 PRINTS PR01003 Flagellar assembly protein FliH signature 81 103 6.7E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VPUCM_RS11590 6f494a3b5b3456a8c4958fe79f7cce70 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 6.7E-5 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VPUCM_RS11590 6f494a3b5b3456a8c4958fe79f7cce70 266 PANTHER PTHR34982:SF1 1 266 2.0E-73 T 22-04-2016 VPUCM_RS11590 6f494a3b5b3456a8c4958fe79f7cce70 266 PANTHER PTHR34982 1 266 2.0E-73 T 22-04-2016 VPUCM_RS10235 7a0d3ab09183ed77cea07d26122effb0 78 Pfam PF06146 Phosphate-starvation-inducible E 8 68 9.5E-11 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VPUCM_RS10235 7a0d3ab09183ed77cea07d26122effb0 78 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.2E-42 T 22-04-2016 IPR013468 Conserved hypothetical protein CHP02647 VPUCM_RS15535 4584641a01918c10e04bf32d449b7919 156 Gene3D G3DSA:3.10.590.10 1 147 4.5E-34 T 22-04-2016 IPR002740 EVE domain VPUCM_RS15535 4584641a01918c10e04bf32d449b7919 156 PANTHER PTHR14087 1 147 1.8E-80 T 22-04-2016 VPUCM_RS15535 4584641a01918c10e04bf32d449b7919 156 SUPERFAMILY SSF88697 1 149 3.13E-63 T 22-04-2016 IPR015947 PUA-like domain VPUCM_RS15535 4584641a01918c10e04bf32d449b7919 156 Pfam PF01878 EVE domain 2 147 5.4E-58 T 22-04-2016 IPR002740 EVE domain VPUCM_RS11945 1dd07cd67d017e43da51dc807e93df66 181 Gene3D G3DSA:3.60.21.10 2 169 1.4E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS11945 1dd07cd67d017e43da51dc807e93df66 181 PANTHER PTHR11124 1 169 1.5E-57 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VPUCM_RS11945 1dd07cd67d017e43da51dc807e93df66 181 SUPERFAMILY SSF56300 2 164 6.16E-38 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VPUCM_RS11945 1dd07cd67d017e43da51dc807e93df66 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 5.5E-23 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type VPUCM_RS11945 1dd07cd67d017e43da51dc807e93df66 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 168 1.8E-28 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VPUCM_RS11945 1dd07cd67d017e43da51dc807e93df66 181 PANTHER PTHR11124:SF14 1 169 1.5E-57 T 22-04-2016 VPUCM_RS08690 184f20bf32d5dfeef4dc6bf9f62b4acf 153 Pfam PF07321 Type III secretion protein YscO 2 149 6.0E-43 T 22-04-2016 IPR009929 Type III secretion sytem,YscO VPUCM_RS03590 968efef58f941091664088bb15062da9 121 SUPERFAMILY SSF56024 39 100 1.54E-11 T 22-04-2016 VPUCM_RS03590 968efef58f941091664088bb15062da9 121 Gene3D G3DSA:3.30.870.10 43 100 3.7E-12 T 22-04-2016 VPUCM_RS16930 b3a4d9bab1df6a2a4a42d2ff6eae7ecd 142 Gene3D G3DSA:2.40.50.140 2 36 6.5E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS16930 b3a4d9bab1df6a2a4a42d2ff6eae7ecd 142 SUPERFAMILY SSF50249 3 68 2.57E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VPUCM_RS01120 96d8c9f0514465d74e925cc55ed9e336 321 SUPERFAMILY SSF64182 6 317 6.8E-35 T 22-04-2016 VPUCM_RS09000 fff23e2f2c1c84e2fab5afb3a41ba1dc 227 SUPERFAMILY SSF48613 3 219 1.39E-57 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 VPUCM_RS09000 fff23e2f2c1c84e2fab5afb3a41ba1dc 227 SMART SM01236 74 175 9.6E-8 T 22-04-2016 VPUCM_RS09000 fff23e2f2c1c84e2fab5afb3a41ba1dc 227 Pfam PF14518 Iron-containing redox enzyme 40 211 1.0E-26 T 22-04-2016 IPR028201 PqqC-like protein VPUCM_RS09000 fff23e2f2c1c84e2fab5afb3a41ba1dc 227 Gene3D G3DSA:1.20.910.10 4 216 1.5E-15 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 VPUCM_RS02360 c34c113a1e836a22fb19002410e263b1 317 Pfam PF03186 CobD/Cbib protein 19 283 2.8E-31 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 VPUCM_RS02360 c34c113a1e836a22fb19002410e263b1 317 PANTHER PTHR34308:SF1 4 314 1.6E-64 T 22-04-2016 VPUCM_RS02360 c34c113a1e836a22fb19002410e263b1 317 PANTHER PTHR34308 4 314 1.6E-64 T 22-04-2016 VPUCM_RS15360 b5caa2d21ac759436554b7e43b0b9f47 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 115 7.4E-50 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 VPUCM_RS15360 b5caa2d21ac759436554b7e43b0b9f47 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 6.0E-59 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 VPUCM_RS10900 3109353adb177334ae28df691baef6cb 106 PANTHER PTHR33473 1 106 3.1E-40 T 22-04-2016 VPUCM_RS10900 3109353adb177334ae28df691baef6cb 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 28.073 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VPUCM_RS10900 3109353adb177334ae28df691baef6cb 106 Gene3D G3DSA:3.30.1390.10 4 106 5.0E-45 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VPUCM_RS10900 3109353adb177334ae28df691baef6cb 106 SUPERFAMILY SSF54736 21 105 6.28E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VPUCM_RS10900 3109353adb177334ae28df691baef6cb 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 2.1E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 VPUCM_RS10860 7724463a6dcbe48137036f3eb2f7afe2 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 6.2E-41 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 VPUCM_RS10840 43f73484a5f89de8a7dc4e565a89e3ba 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS10840 43f73484a5f89de8a7dc4e565a89e3ba 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS10840 43f73484a5f89de8a7dc4e565a89e3ba 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VPUCM_RS10840 43f73484a5f89de8a7dc4e565a89e3ba 267 SUPERFAMILY SSF53474 15 260 1.85E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS10840 43f73484a5f89de8a7dc4e565a89e3ba 267 PANTHER PTHR10992 157 262 4.1E-41 T 22-04-2016 VPUCM_RS10840 43f73484a5f89de8a7dc4e565a89e3ba 267 PANTHER PTHR10992 16 133 4.1E-41 T 22-04-2016 VPUCM_RS10840 43f73484a5f89de8a7dc4e565a89e3ba 267 Gene3D G3DSA:3.40.50.1820 14 261 2.6E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VPUCM_RS10840 43f73484a5f89de8a7dc4e565a89e3ba 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 6.7E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VPUCM_RS11555 cb92df075d3936ba76a46028e37abbf4 137 PANTHER PTHR38766:SF1 1 137 2.1E-28 T 22-04-2016 VPUCM_RS11555 cb92df075d3936ba76a46028e37abbf4 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 3.8E-22 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VPUCM_RS11555 cb92df075d3936ba76a46028e37abbf4 137 PANTHER PTHR38766 1 137 2.1E-28 T 22-04-2016 VPUCM_RS11555 cb92df075d3936ba76a46028e37abbf4 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 1.4E-19 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VPUCM_RS10830 838faadd007b8a31ec1795fa502b52af 230 Pfam PF09335 SNARE associated Golgi protein 65 181 5.1E-23 T 22-04-2016 IPR032816 SNARE associated Golgi protein VPUCM_RS10830 838faadd007b8a31ec1795fa502b52af 230 PANTHER PTHR12677 5 212 1.9E-45 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VPUCM_RS06925 7a737f65a1878363a07e8f20703c4e0b 149 Pfam PF00293 NUDIX domain 35 91 5.4E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VPUCM_RS06925 7a737f65a1878363a07e8f20703c4e0b 149 SUPERFAMILY SSF55811 16 142 1.62E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS06925 7a737f65a1878363a07e8f20703c4e0b 149 Gene3D G3DSA:3.90.79.10 13 123 1.1E-11 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VPUCM_RS05485 335642b3cc4663b01e79880aee1bc0e3 242 Pfam PF10972 Peptidoglycan-binding protein, CsiV 2 241 2.5E-64 T 22-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV VPUCM_RS05285 0a7906db35aceaca0feec559ba7231ea 105 SUPERFAMILY SSF158757 8 85 4.84E-36 T 22-04-2016 IPR023163 SMc04008-like domain VPUCM_RS05285 0a7906db35aceaca0feec559ba7231ea 105 Gene3D G3DSA:1.10.3340.10 7 92 4.6E-43 T 22-04-2016 IPR023163 SMc04008-like domain VPUCM_RS05285 0a7906db35aceaca0feec559ba7231ea 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 3.9E-35 T 22-04-2016 IPR023163 SMc04008-like domain VPUCM_RS07285 567f3c73454c444c122337dfd4ebb65e 59 Pfam PF00805 Pentapeptide repeats (8 copies) 1 26 6.3E-10 T 22-04-2016 IPR001646 Pentapeptide repeat VPUCM_RS07285 567f3c73454c444c122337dfd4ebb65e 59 SUPERFAMILY SSF141571 2 54 6.67E-16 T 22-04-2016 VPUCM_RS06550 63baf3e1c958ec63f4a4ed1ec8f5954f 420 Pfam PF09375 Imelysin 40 397 1.6E-98 T 22-04-2016 VPUCM_RS11020 d2dee43395661b45abf3894c580ad875 111 Gene3D G3DSA:3.40.30.10 7 102 1.0E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11020 d2dee43395661b45abf3894c580ad875 111 PANTHER PTHR10293 1 105 4.6E-55 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related VPUCM_RS11020 d2dee43395661b45abf3894c580ad875 111 PIRSF PIRSF005894 1 107 9.0E-52 T 22-04-2016 IPR014434 Monothiol glutaredoxin VPUCM_RS11020 d2dee43395661b45abf3894c580ad875 111 SUPERFAMILY SSF52833 1 104 3.67E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold VPUCM_RS11020 d2dee43395661b45abf3894c580ad875 111 Pfam PF00462 Glutaredoxin 16 80 4.3E-17 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VPUCM_RS11020 d2dee43395661b45abf3894c580ad875 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.7E-46 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related VPUCM_RS06970 9f512f3f53498edbc6adb747d40117bd 94 Pfam PF05488 PAAR motif 21 86 2.5E-25 T 22-04-2016 IPR008727 PAAR motif VPUCM_RS08625 e702044cf658ec0c70be451dc8aa6b4b 334 Pfam PF05844 YopD protein 90 331 3.0E-37 T 22-04-2016 IPR008898 YopD-like VPUCM_RS07255 ed11f2f1c06760fa61dc19cd1253ed32 81 Pfam PF07362 Post-segregation antitoxin CcdA 11 81 9.7E-29 T 22-04-2016 IPR009956 Post-segregation antitoxin CcdA VPUCM_RS15870 b40b16181d96e76f31c9350b5212a9bf 370 Pfam PF02481 DNA recombination-mediator protein A 77 281 2.8E-78 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VPUCM_RS15870 b40b16181d96e76f31c9350b5212a9bf 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 289 1.2E-79 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VPUCM_RS15870 b40b16181d96e76f31c9350b5212a9bf 370 Gene3D G3DSA:3.40.50.450 116 260 7.8E-13 T 22-04-2016 VPUCM_RS15870 b40b16181d96e76f31c9350b5212a9bf 370 PANTHER PTHR32039 61 369 4.7E-115 T 22-04-2016 VPUCM_RS15870 b40b16181d96e76f31c9350b5212a9bf 370 SUPERFAMILY SSF102405 84 291 2.14E-43 T 22-04-2016 VPUCM_RS15870 b40b16181d96e76f31c9350b5212a9bf 370 PANTHER PTHR32039:SF8 61 369 4.7E-115 T 22-04-2016 VPUCM_RS00950 26dfc442120fa654c24a433020cc2ab8 78 SUPERFAMILY SSF143800 2 76 7.85E-30 T 22-04-2016 VPUCM_RS00950 26dfc442120fa654c24a433020cc2ab8 78 Pfam PF00830 Ribosomal L28 family 3 62 4.0E-26 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 VPUCM_RS00950 26dfc442120fa654c24a433020cc2ab8 78 Gene3D G3DSA:2.30.170.40 2 77 1.8E-35 T 22-04-2016 VPUCM_RS00950 26dfc442120fa654c24a433020cc2ab8 78 PANTHER PTHR13528 1 74 6.2E-35 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 VPUCM_RS00950 26dfc442120fa654c24a433020cc2ab8 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS00950 26dfc442120fa654c24a433020cc2ab8 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VPUCM_RS08125 ddbf33e558df86c407e324d60a1d52e7 219 Pfam PF11205 Protein of unknown function (DUF2987) 21 165 3.5E-52 T 22-04-2016 IPR021370 Protein of unknown function DUF2987 VPUCM_RS03075 2ebb488d4eae8c75886184d859477838 258 SUPERFAMILY SSF101082 29 224 1.03E-32 T 22-04-2016 IPR023220 Type IV secretion system, VirB5-domain VPUCM_RS03075 2ebb488d4eae8c75886184d859477838 258 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 8 249 1.3E-61 T 22-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ VPUCM_RS11215 2e76825eb4a487f94feb4c5d30b7b708 82 PANTHER PTHR36931 1 82 1.4E-39 T 22-04-2016 VPUCM_RS11215 2e76825eb4a487f94feb4c5d30b7b708 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 1.5E-5 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VPUCM_RS08605 37368f32f9d1ca6d802084ba876de7fb 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 155 6.2E-16 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 VPUCM_RS15960 54e9d68dc2194d6b05c0ca53be3280b5 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 1.0E-4 T 22-04-2016 VPUCM_RS15960 54e9d68dc2194d6b05c0ca53be3280b5 94 Gene3D G3DSA:3.30.70.260 1 76 1.4E-12 T 22-04-2016 VPUCM_RS15960 54e9d68dc2194d6b05c0ca53be3280b5 94 Pfam PF13710 ACT domain 12 73 2.9E-21 T 22-04-2016 VPUCM_RS15960 54e9d68dc2194d6b05c0ca53be3280b5 94 SUPERFAMILY SSF55021 3 76 1.21E-11 T 22-04-2016 VPUCM_RS05045 aff0d06e5e47420e505a85347dcea5ab 240 SUPERFAMILY SSF53955 71 187 2.44E-11 T 22-04-2016 IPR023346 Lysozyme-like domain VPUCM_RS05045 aff0d06e5e47420e505a85347dcea5ab 240 Gene3D G3DSA:1.10.530.10 85 171 7.7E-8 T 22-04-2016 VPUCM_RS11665 686d929f1c99bbd264ff36797c42fc91 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 1.4E-54 T 22-04-2016 IPR021318 Protein of unknown function DUF2919 VPUCM_RS14275 3faf671063ed37328ab3277abda8ec75 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 9.3E-23 T 22-04-2016 IPR014318 Phage shock protein, PspG VPUCM_RS14275 3faf671063ed37328ab3277abda8ec75 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 1.7E-23 T 22-04-2016 IPR014318 Phage shock protein, PspG VPUCM_RS22760 0e5879cfcef3225e2c3e5bd47d6089fd 95 Gene3D G3DSA:3.40.50.300 2 58 2.0E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS22760 0e5879cfcef3225e2c3e5bd47d6089fd 95 PANTHER PTHR32071 1 94 2.4E-44 T 22-04-2016 VPUCM_RS22760 0e5879cfcef3225e2c3e5bd47d6089fd 95 PANTHER PTHR32071:SF3 1 94 2.4E-44 T 22-04-2016 VPUCM_RS22760 0e5879cfcef3225e2c3e5bd47d6089fd 95 Pfam PF00158 Sigma-54 interaction domain 1 52 9.7E-15 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VPUCM_RS22760 0e5879cfcef3225e2c3e5bd47d6089fd 95 SUPERFAMILY SSF52540 2 93 1.06E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS13140 f27443ece4c1bf72cc9b3ab334e5bfa0 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 6.2E-21 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VPUCM_RS13140 f27443ece4c1bf72cc9b3ab334e5bfa0 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.705 T 22-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VPUCM_RS13140 f27443ece4c1bf72cc9b3ab334e5bfa0 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.8E-19 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VPUCM_RS14065 2876cdfb1001051c471230199773e91e 162 Pfam PF04093 rod shape-determining protein MreD 9 154 8.3E-40 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VPUCM_RS14065 2876cdfb1001051c471230199773e91e 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.5E-36 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VPUCM_RS14065 2876cdfb1001051c471230199773e91e 162 PANTHER PTHR37484 1 162 4.9E-65 T 22-04-2016 VPUCM_RS14065 2876cdfb1001051c471230199773e91e 162 PIRSF PIRSF018472 1 162 7.7E-42 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type VPUCM_RS13430 66a9b8777af432d9fdf5d7a016e4b3b0 160 SUPERFAMILY SSF55826 9 151 1.83E-30 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS13430 66a9b8777af432d9fdf5d7a016e4b3b0 160 Pfam PF04073 Aminoacyl-tRNA editing domain 39 142 2.8E-17 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS13430 66a9b8777af432d9fdf5d7a016e4b3b0 160 Gene3D G3DSA:3.90.960.10 6 153 5.4E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VPUCM_RS07150 5e82ebc2e6d0b6562a0da9f6e8aebd7e 170 Gene3D G3DSA:1.20.120.330 23 117 1.2E-9 T 22-04-2016 VPUCM_RS07150 5e82ebc2e6d0b6562a0da9f6e8aebd7e 170 SUPERFAMILY SSF81593 25 117 1.65E-8 T 22-04-2016 VPUCM_RS07150 5e82ebc2e6d0b6562a0da9f6e8aebd7e 170 Pfam PF05168 HEPN domain 24 118 1.0E-7 T 22-04-2016 IPR007842 HEPN domain VPUCM_RS04550 1653e92c3274c53deaf74dd3f2810550 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 4.8E-20 T 22-04-2016 IPR025346 Protein of unknown function DUF4250 VPUCM_RS15345 45091560cad62151ca275a0645716de6 227 Pfam PF01902 Diphthamide synthase 6 215 1.3E-22 T 22-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 VPUCM_RS15345 45091560cad62151ca275a0645716de6 227 Gene3D G3DSA:3.40.50.620 3 145 9.1E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VPUCM_RS15345 45091560cad62151ca275a0645716de6 227 Gene3D G3DSA:3.90.1490.10 147 221 1.1E-15 T 22-04-2016 VPUCM_RS15345 45091560cad62151ca275a0645716de6 227 SUPERFAMILY SSF52402 4 222 4.93E-55 T 22-04-2016 VPUCM_RS10120 1557c7b68b4d6d6e42d5a6c145cf3b0b 283 SUPERFAMILY SSF158855 32 280 3.66E-60 T 22-04-2016 VPUCM_RS10120 1557c7b68b4d6d6e42d5a6c145cf3b0b 283 Pfam PF03280 Proteobacterial lipase chaperone protein 85 269 4.9E-38 T 22-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 VPUCM_RS03495 9e38a90a7d6a4228988380810507489c 151 Gene3D G3DSA:3.40.630.30 1 146 1.2E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS03495 9e38a90a7d6a4228988380810507489c 151 SUPERFAMILY SSF55729 1 147 2.19E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS03495 9e38a90a7d6a4228988380810507489c 151 PANTHER PTHR23091:SF247 1 145 7.3E-31 T 22-04-2016 VPUCM_RS03495 9e38a90a7d6a4228988380810507489c 151 PANTHER PTHR23091 1 145 7.3E-31 T 22-04-2016 VPUCM_RS03495 9e38a90a7d6a4228988380810507489c 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 1.0E-36 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 VPUCM_RS03495 9e38a90a7d6a4228988380810507489c 151 Pfam PF00583 Acetyltransferase (GNAT) family 47 121 7.7E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS10725 02b0efc5b560f6c6100f7cdf16cba8cd 528 PANTHER PTHR30365 1 310 6.5E-276 T 22-04-2016 VPUCM_RS10725 02b0efc5b560f6c6100f7cdf16cba8cd 528 PANTHER PTHR30365 376 520 6.5E-276 T 22-04-2016 VPUCM_RS10725 02b0efc5b560f6c6100f7cdf16cba8cd 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.6E-178 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VPUCM_RS10725 02b0efc5b560f6c6100f7cdf16cba8cd 528 PANTHER PTHR30365:SF0 1 310 6.5E-276 T 22-04-2016 VPUCM_RS10725 02b0efc5b560f6c6100f7cdf16cba8cd 528 PANTHER PTHR30365:SF0 376 520 6.5E-276 T 22-04-2016 VPUCM_RS08920 c4a9ba3fae89bb6b35592d30edca0ec2 383 Pfam PF12698 ABC-2 family transporter protein 22 367 1.2E-39 T 22-04-2016 VPUCM_RS08920 c4a9ba3fae89bb6b35592d30edca0ec2 383 PANTHER PTHR30294:SF2 1 374 2.0E-141 T 22-04-2016 VPUCM_RS08920 c4a9ba3fae89bb6b35592d30edca0ec2 383 PANTHER PTHR30294 1 374 2.0E-141 T 22-04-2016 VPUCM_RS02350 314fc721af5109515e83594631336930 206 PANTHER PTHR30506 1 206 3.1E-94 T 22-04-2016 VPUCM_RS02350 314fc721af5109515e83594631336930 206 Pfam PF03458 UPF0126 domain 95 166 5.3E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VPUCM_RS02350 314fc721af5109515e83594631336930 206 Pfam PF03458 UPF0126 domain 8 81 4.6E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VPUCM_RS02350 314fc721af5109515e83594631336930 206 PANTHER PTHR30506:SF3 1 206 3.1E-94 T 22-04-2016 VPUCM_RS13865 1eb07b98cc3ac7b5a87223579c8b5cc4 671 Gene3D G3DSA:1.10.443.10 275 488 5.7E-4 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS03915 fdb027ef64753797f126f00f76c34dbf 298 Pfam PF10938 YfdX protein 67 204 1.4E-32 T 22-04-2016 IPR021236 Uncharacterised protein family YfdX VPUCM_RS11830 1b695baa41ce89fa116eae14a39dda6b 256 Pfam PF08907 Domain of unknown function (DUF1853) 29 212 1.3E-39 T 22-04-2016 IPR015003 Protein of unknown function DUF1853 VPUCM_RS04555 b8e084133566f96a096f03bb6059df30 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 6.0E-27 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VPUCM_RS04555 b8e084133566f96a096f03bb6059df30 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.93 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VPUCM_RS04555 b8e084133566f96a096f03bb6059df30 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.5E-36 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VPUCM_RS08760 93b80675764ccca6edc0cb8d5abb2ea9 149 Gene3D G3DSA:3.30.1460.10 7 131 2.8E-8 T 22-04-2016 VPUCM_RS08760 93b80675764ccca6edc0cb8d5abb2ea9 149 SUPERFAMILY SSF69635 5 131 3.61E-11 T 22-04-2016 VPUCM_RS08760 93b80675764ccca6edc0cb8d5abb2ea9 149 Pfam PF05932 Tir chaperone protein (CesT) family 9 125 6.7E-6 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VPUCM_RS08840 7c70f637f9d10127ba2c203aa5140fa3 138 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 8 138 1.7E-54 T 22-04-2016 IPR013400 Type III secretion system chaperone, YscW VPUCM_RS08840 7c70f637f9d10127ba2c203aa5140fa3 138 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 129 2.7E-14 T 22-04-2016 VPUCM_RS00285 0c27800c14241624e5c6a97127716564 734 SUPERFAMILY SSF49313 267 338 5.81E-5 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 VPUCM_RS07495 78cf0caac4f394dd1dd3470b8a9d3c20 374 SUPERFAMILY SSF53756 81 372 1.57E-21 T 22-04-2016 VPUCM_RS07495 78cf0caac4f394dd1dd3470b8a9d3c20 374 Pfam PF13692 Glycosyl transferases group 1 216 345 4.2E-7 T 22-04-2016 VPUCM_RS07405 dc2ab3928c81de1c1b511d803c2ffa6c 131 Pfam PF13306 Leucine rich repeats (6 copies) 40 99 2.0E-7 T 22-04-2016 IPR026906 Leucine rich repeat 5 VPUCM_RS10240 7f5e05e6da14a0097109bd6ba53ad683 140 PANTHER PTHR42641 5 127 7.1E-31 T 22-04-2016 VPUCM_RS10240 7f5e05e6da14a0097109bd6ba53ad683 140 PANTHER PTHR42641:SF2 5 127 7.1E-31 T 22-04-2016 VPUCM_RS10240 7f5e05e6da14a0097109bd6ba53ad683 140 Pfam PF05232 Chlorhexidine efflux transporter 1 63 7.7E-24 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter VPUCM_RS10240 7f5e05e6da14a0097109bd6ba53ad683 140 Pfam PF05232 Chlorhexidine efflux transporter 69 131 4.1E-22 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter VPUCM_RS14305 a720e2d2c823d8775b2bbd316a856b83 398 Pfam PF01103 Surface antigen 116 371 6.9E-6 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VPUCM_RS10395 1e9f6cb6514f89fa9b33082cf24edcf4 192 SUPERFAMILY SSF159594 29 192 8.89E-29 T 22-04-2016 VPUCM_RS10395 1e9f6cb6514f89fa9b33082cf24edcf4 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 189 1.6E-38 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component VPUCM_RS10395 1e9f6cb6514f89fa9b33082cf24edcf4 192 Gene3D G3DSA:3.40.50.10610 16 190 2.3E-19 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component VPUCM_RS12230 6030b0a927fd6f520259a189e5324951 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 83 204 2.9E-6 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin VPUCM_RS12230 6030b0a927fd6f520259a189e5324951 230 Gene3D G3DSA:2.40.230.30 43 230 2.8E-32 T 22-04-2016 VPUCM_RS01380 8fc5b476d2c98a679fed3aaca576a447 80 Pfam PF06005 Protein of unknown function (DUF904) 1 78 2.3E-25 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VPUCM_RS01380 8fc5b476d2c98a679fed3aaca576a447 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.826 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VPUCM_RS09530 ee42338cbd3fcbee5bfb820bf083a78b 225 PANTHER PTHR30249 1 219 5.6E-90 T 22-04-2016 VPUCM_RS09530 ee42338cbd3fcbee5bfb820bf083a78b 225 PANTHER PTHR30249:SF5 1 219 5.6E-90 T 22-04-2016 VPUCM_RS09530 ee42338cbd3fcbee5bfb820bf083a78b 225 Pfam PF04172 LrgB-like family 6 217 3.2E-69 T 22-04-2016 IPR007300 CidB/LrgB family VPUCM_RS03735 c345c03a1a6f84cecfc36646b8f78439 799 SUPERFAMILY SSF52540 389 722 4.13E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03735 c345c03a1a6f84cecfc36646b8f78439 799 Gene3D G3DSA:3.40.50.300 429 509 1.1E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03735 c345c03a1a6f84cecfc36646b8f78439 799 Gene3D G3DSA:3.40.50.300 589 714 1.1E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS03735 c345c03a1a6f84cecfc36646b8f78439 799 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 15 795 3.0E-213 T 22-04-2016 IPR014117 Type-IV secretion system protein TraC VPUCM_RS03735 c345c03a1a6f84cecfc36646b8f78439 799 PANTHER PTHR38467 166 792 1.1E-22 T 22-04-2016 VPUCM_RS03735 c345c03a1a6f84cecfc36646b8f78439 799 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 11 241 1.9E-52 T 22-04-2016 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase VPUCM_RS03735 c345c03a1a6f84cecfc36646b8f78439 799 Pfam PF12846 AAA-like domain 437 692 7.7E-14 T 22-04-2016 VPUCM_RS07515 757c7f0e65e286826235148d3555a313 394 Pfam PF00534 Glycosyl transferases group 1 184 347 1.7E-30 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VPUCM_RS07515 757c7f0e65e286826235148d3555a313 394 PANTHER PTHR12526 1 367 6.2E-50 T 22-04-2016 VPUCM_RS07515 757c7f0e65e286826235148d3555a313 394 SUPERFAMILY SSF53756 7 370 3.9E-68 T 22-04-2016 VPUCM_RS07515 757c7f0e65e286826235148d3555a313 394 Pfam PF13439 Glycosyltransferase Family 4 19 175 6.4E-16 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VPUCM_RS07515 757c7f0e65e286826235148d3555a313 394 Gene3D G3DSA:3.40.50.2000 162 345 1.7E-21 T 22-04-2016 VPUCM_RS06070 c7af93b9d3b513a20b960e527c8663b7 179 Pfam PF12915 Protein of unknown function (DUF3833) 17 177 2.4E-66 T 22-04-2016 IPR024409 Protein of unknown function DUF3833 VPUCM_RS02650 77d04baf20b33300ee25d9445ebeee26 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 6.6E-22 T 22-04-2016 IPR021242 Protein of unknown function DUF2799 VPUCM_RS08990 8f8f046c5e20854f76256d2362f258dc 203 Pfam PF12261 Thermostable hemolysin 18 188 1.9E-60 T 22-04-2016 IPR022050 Thermostable hemolysin VPUCM_RS03705 f55e35f0e57dc4c2919e77b1193c2c0a 429 Pfam PF03743 Bacterial conjugation TrbI-like protein 213 416 3.4E-39 T 22-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI VPUCM_RS05065 06338f855ab1826518cb61fc8fda8586 455 PANTHER PTHR32024 25 455 6.0E-172 T 22-04-2016 VPUCM_RS05065 06338f855ab1826518cb61fc8fda8586 455 PANTHER PTHR32024:SF1 25 455 6.0E-172 T 22-04-2016 VPUCM_RS05065 06338f855ab1826518cb61fc8fda8586 455 Pfam PF02386 Cation transport protein 51 437 3.5E-54 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VPUCM_RS05065 06338f855ab1826518cb61fc8fda8586 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 2.8E-127 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VPUCM_RS08845 e408a3aa4172f34f3031b805b774ab8e 148 Gene3D G3DSA:3.30.1460.10 4 129 1.5E-9 T 22-04-2016 VPUCM_RS08845 e408a3aa4172f34f3031b805b774ab8e 148 Pfam PF05932 Tir chaperone protein (CesT) family 10 124 3.0E-14 T 22-04-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 VPUCM_RS08845 e408a3aa4172f34f3031b805b774ab8e 148 SUPERFAMILY SSF69635 4 136 9.03E-26 T 22-04-2016 VPUCM_RS03335 ed275367c75d71fa27c754722686dd53 519 PANTHER PTHR30282:SF1 5 519 0.0 T 22-04-2016 VPUCM_RS03335 ed275367c75d71fa27c754722686dd53 519 PANTHER PTHR30282 5 519 0.0 T 22-04-2016 VPUCM_RS03335 ed275367c75d71fa27c754722686dd53 519 Pfam PF03806 AbgT putative transporter family 19 517 1.0E-210 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VPUCM_RS11935 ce719de680fa66fe61c9838585c36330 251 PANTHER PTHR30269 1 251 5.0E-29 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS11935 ce719de680fa66fe61c9838585c36330 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 7.9E-35 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VPUCM_RS04730 d3b135d39d4166887cecb571d5518790 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 58.747 T 22-04-2016 IPR022958 Uncharacterised protein family UPF0294 VPUCM_RS04730 d3b135d39d4166887cecb571d5518790 281 SUPERFAMILY SSF56219 61 277 1.19E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS04730 d3b135d39d4166887cecb571d5518790 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 1.2E-12 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS04730 d3b135d39d4166887cecb571d5518790 281 Gene3D G3DSA:3.60.10.10 59 232 1.6E-6 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VPUCM_RS03220 69b678f7b45d39553e901f50327f9deb 296 Pfam PF13737 Transposase DDE domain 19 129 4.8E-45 T 22-04-2016 IPR025668 Transposase DDE domain VPUCM_RS03220 69b678f7b45d39553e901f50327f9deb 296 PANTHER PTHR34631:SF2 3 296 3.2E-184 T 22-04-2016 VPUCM_RS03220 69b678f7b45d39553e901f50327f9deb 296 PANTHER PTHR34631 3 296 3.2E-184 T 22-04-2016 VPUCM_RS08150 058fc82e3d9d879623310459573042d2 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 2.0E-17 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VPUCM_RS08150 058fc82e3d9d879623310459573042d2 54 PANTHER PTHR41532 2 51 6.5E-19 T 22-04-2016 VPUCM_RS08150 058fc82e3d9d879623310459573042d2 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 6.5E-21 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VPUCM_RS09705 ffaffea2858b3d7c1ae4c27b2564856f 130 SUPERFAMILY SSF52540 22 97 3.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09705 ffaffea2858b3d7c1ae4c27b2564856f 130 Gene3D G3DSA:3.40.50.300 19 121 8.3E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS09705 ffaffea2858b3d7c1ae4c27b2564856f 130 Pfam PF03846 Cell division inhibitor SulA 17 96 4.5E-7 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 VPUCM_RS15720 a417f8fbdeae78633271c9cb8a002211 252 Pfam PF09836 Putative DNA-binding domain 6 93 1.8E-22 T 22-04-2016 IPR018640 Putative DNA-binding domain, bacteria VPUCM_RS03545 82f2303dd55831101a6fbea92eeb27a3 707 Gene3D G3DSA:1.10.443.10 449 616 1.9E-5 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VPUCM_RS03545 82f2303dd55831101a6fbea92eeb27a3 707 SUPERFAMILY SSF56349 446 617 2.94E-10 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VPUCM_RS09460 6e9717e38b1de5fdc37bf42fd061fe53 193 Pfam PF07209 Protein of unknown function (DUF1415) 17 185 1.0E-65 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 VPUCM_RS10945 bf8ecca6cd0f80976c6fa9b9f5b2f656 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 1.6E-23 T 22-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related VPUCM_RS08035 18f876b043d53ca1fc98af3c51d77e71 295 Pfam PF15575 Immunity protein 49 63 279 4.6E-41 T 22-04-2016 IPR029074 Immunity protein 49 VPUCM_RS13940 7f19a0a3a457d364d2dcd77b170ad226 263 PANTHER PTHR30188:SF4 4 263 6.6E-121 T 22-04-2016 VPUCM_RS13940 7f19a0a3a457d364d2dcd77b170ad226 263 Pfam PF02405 Permease MlaE 48 259 6.2E-74 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VPUCM_RS13940 7f19a0a3a457d364d2dcd77b170ad226 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 261 1.2E-95 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VPUCM_RS13940 7f19a0a3a457d364d2dcd77b170ad226 263 PANTHER PTHR30188 4 263 6.6E-121 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VPUCM_RS14150 5e1cd1f402de8e437f1d3c2178b59925 216 Gene3D G3DSA:3.30.70.60 118 202 2.7E-6 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VPUCM_RS14150 5e1cd1f402de8e437f1d3c2178b59925 216 Pfam PF04612 Type II secretion system (T2SS), protein M 7 75 5.3E-8 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VPUCM_RS03725 dc72a0c56e4844f89e817e5e70377d8e 178 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 42 112 2.6E-7 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin VPUCM_RS01250 6533a8e992d1d1bb6181f58c940725d8 352 Pfam PF13692 Glycosyl transferases group 1 187 289 7.2E-7 T 22-04-2016 VPUCM_RS01250 6533a8e992d1d1bb6181f58c940725d8 352 SUPERFAMILY SSF53756 182 313 6.22E-8 T 22-04-2016 VPUCM_RS05080 01b1388f9742e02224278e888278f8b2 489 PANTHER PTHR32057 16 489 9.3E-194 T 22-04-2016 VPUCM_RS05080 01b1388f9742e02224278e888278f8b2 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 6.1E-157 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 VPUCM_RS05080 01b1388f9742e02224278e888278f8b2 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.713 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 VPUCM_RS10150 655bb8128e16ed0c3d0911f8b5737918 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 4.1E-35 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VPUCM_RS10150 655bb8128e16ed0c3d0911f8b5737918 77 Pfam PF06667 Phage shock protein B 4 74 1.1E-31 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VPUCM_RS07315 e44ad76d6a26c79cb1389ed0d5087304 129 Gene3D G3DSA:3.40.50.300 20 53 2.8E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS10590 81712478b8d8879e5386a2c10e9ceb6a 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 9.7E-17 T 22-04-2016 IPR003772 Protein of unknown function DUF177 VPUCM_RS10590 81712478b8d8879e5386a2c10e9ceb6a 174 PANTHER PTHR38099 2 174 2.8E-74 T 22-04-2016 VPUCM_RS07890 ea7aa2bc5fae9ae032fa9920f9d034e3 212 PANTHER PTHR30576 13 211 1.7E-75 T 22-04-2016 VPUCM_RS07890 ea7aa2bc5fae9ae032fa9920f9d034e3 212 Pfam PF02397 Bacterial sugar transferase 14 207 3.8E-51 T 22-04-2016 IPR003362 Bacterial sugar transferase VPUCM_RS06460 8ab932021a4f1364c8c39676cb9bb727 300 Pfam PF13084 Domain of unknown function (DUF3943) 137 246 2.3E-37 T 22-04-2016 IPR025079 Domain of unknown function DUF3943 VPUCM_RS14270 c25cd1a1992cc58c76109638cfc90b2d 219 Pfam PF13505 Outer membrane protein beta-barrel domain 9 219 3.4E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VPUCM_RS14270 c25cd1a1992cc58c76109638cfc90b2d 219 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 5 219 1.4E-54 T 22-04-2016 IPR026387 Outer membrane protein VPUCM_RS01625 a3e74ca517fb665964770c9794d9147b 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 1.2E-109 T 22-04-2016 IPR021254 Protein of unknown function DUF2806 VPUCM_RS01625 a3e74ca517fb665964770c9794d9147b 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 1.9E-85 T 22-04-2016 IPR021254 Protein of unknown function DUF2806 VPUCM_RS01675 bed00f4f9b617a9dfa8e3d8241ae4e4a 1255 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 920 1254 2.9E-65 T 22-04-2016 IPR007452 Translocation and assembly module TamB VPUCM_RS01675 bed00f4f9b617a9dfa8e3d8241ae4e4a 1255 PANTHER PTHR36985 1 1255 1.7E-298 T 22-04-2016 VPUCM_RS08215 a8dbef990d09d4ffee38e35a18502588 418 Pfam PF02486 Replication initiation factor 206 378 4.2E-27 T 22-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 VPUCM_RS08235 fd2e123325d3ec606b382f810989b631 498 Gene3D G3DSA:2.170.140.10 100 126 7.1E-4 T 22-04-2016 IPR002557 Chitin binding domain GO:0005576|GO:0006030|GO:0008061 VPUCM_RS05635 a3531bd1569b624a5103066a55e4199c 112 Gene3D G3DSA:1.20.120.160 2 111 6.8E-29 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS05635 a3531bd1569b624a5103066a55e4199c 112 Pfam PF01627 Hpt domain 24 102 8.3E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS05635 a3531bd1569b624a5103066a55e4199c 112 SUPERFAMILY SSF47226 2 110 2.88E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VPUCM_RS00570 47b69980f004c7fecddeb9c1c8820f89 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 3.3E-44 T 22-04-2016 IPR019617 Domain of unknown function DUF2489 VPUCM_RS09980 ec27a71a3ec7102e8e277f23b6c6642e 235 Gene3D G3DSA:3.40.630.30 141 230 4.3E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS09980 ec27a71a3ec7102e8e277f23b6c6642e 235 Pfam PF13673 Acetyltransferase (GNAT) domain 130 231 5.7E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VPUCM_RS09980 ec27a71a3ec7102e8e277f23b6c6642e 235 SUPERFAMILY SSF55729 112 229 5.58E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VPUCM_RS05565 660dc5cc098d1066fd732426909047ab 222 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 205 9.9E-8 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 VPUCM_RS04160 38bb8c3b998187bc9f4b21a84617053d 172 Pfam PF07811 TadE-like protein 10 52 8.8E-8 T 22-04-2016 IPR012495 TadE-like VPUCM_RS00455 1fd5dbafd1c7d8ffec87be44174ce0be 143 Pfam PF09537 Domain of unknown function (DUF2383) 5 111 1.6E-23 T 22-04-2016 IPR019052 Domain of unknown function DUF2383 VPUCM_RS07965 e4bcbae9b58cbfe04885648b0d1168a6 209 Pfam PF11748 Protein of unknown function (DUF3306) 4 120 1.2E-26 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 VPUCM_RS05335 3859211644526e2980c6aba61f3a8a09 625 Pfam PF00665 Integrase core domain 218 355 5.3E-12 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VPUCM_RS05335 3859211644526e2980c6aba61f3a8a09 625 Pfam PF09299 Mu transposase, C-terminal 444 504 3.9E-8 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal VPUCM_RS05335 3859211644526e2980c6aba61f3a8a09 625 SUPERFAMILY SSF53098 213 362 6.64E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS05335 3859211644526e2980c6aba61f3a8a09 625 Gene3D G3DSA:1.10.10.60 135 202 4.5E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VPUCM_RS05335 3859211644526e2980c6aba61f3a8a09 625 Gene3D G3DSA:3.30.420.10 213 398 2.4E-16 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VPUCM_RS03700 c7aef37e99d0684e227db1f1f03867f5 298 Pfam PF06586 TraK protein 67 275 7.2E-15 T 22-04-2016 IPR010563 Pilus assembly TraK VPUCM_RS04600 a6dc971ce49ccd7e3381821cc404c86c 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 2.0E-133 T 22-04-2016 IPR021936 Protein of unknown function DUF3549 VPUCM_RS03900 e9e5517a225c68d6dcfa3555c41936b5 166 Pfam PF06146 Phosphate-starvation-inducible E 79 148 1.6E-14 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VPUCM_RS06600 d37b94d44781d4b09f7c983556068f7b 179 PANTHER PTHR35011 1 173 3.9E-92 T 22-04-2016 VPUCM_RS06600 d37b94d44781d4b09f7c983556068f7b 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 4.7E-27 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VPUCM_RS06600 d37b94d44781d4b09f7c983556068f7b 179 PANTHER PTHR35011:SF4 1 173 3.9E-92 T 22-04-2016 VPUCM_RS11030 82edfa16f13df35fb233d4ebb5b93b3c 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 1.4E-61 T 22-04-2016 IPR021879 Ribosomal S4P (gammaproteobacterial) VPUCM_RS15920 e0d877527d25d1f2e161e22dc91cb850 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-39 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 VPUCM_RS15920 e0d877527d25d1f2e161e22dc91cb850 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.9E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 VPUCM_RS07500 f6bd7bc9f11a1fa9a9d8546798ef169c 454 Pfam PF04932 O-Antigen ligase 239 377 2.0E-19 T 22-04-2016 IPR007016 O-antigen ligase-related VPUCM_RS10940 2ab8338123defad9dcb0b3a834e9ffdb 181 Pfam PF07445 Primosomal replication protein priC 4 178 1.1E-50 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC VPUCM_RS04195 3edbba891d00f865dc940269a8d21621 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 1.4E-91 T 22-04-2016 IPR014047 Chromate transporter, long chain VPUCM_RS04195 3edbba891d00f865dc940269a8d21621 379 PIRSF PIRSF004810 1 379 4.3E-114 T 22-04-2016 IPR014047 Chromate transporter, long chain VPUCM_RS04195 3edbba891d00f865dc940269a8d21621 379 Pfam PF02417 Chromate transporter 3 168 7.7E-33 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VPUCM_RS04195 3edbba891d00f865dc940269a8d21621 379 Pfam PF02417 Chromate transporter 211 373 6.3E-35 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VPUCM_RS04195 3edbba891d00f865dc940269a8d21621 379 PANTHER PTHR33567 1 379 2.0E-121 T 22-04-2016 VPUCM_RS04195 3edbba891d00f865dc940269a8d21621 379 PANTHER PTHR33567:SF3 1 379 2.0E-121 T 22-04-2016 VPUCM_RS12175 bc3a8416e282c0056a40de3d69707249 143 Pfam PF02169 LPP20 lipoprotein 20 118 9.8E-10 T 22-04-2016 IPR024952 Lipoprotein LPP20-like VPUCM_RS12175 bc3a8416e282c0056a40de3d69707249 143 PIRSF PIRSF028687 1 143 5.1E-58 T 22-04-2016 IPR007293 Flagellar protein FlgP VPUCM_RS09755 aedfd793a29a4f24baba8fb3506b247a 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 2.6E-96 T 22-04-2016 IPR021246 Protein of unknown function DUF2797 VPUCM_RS03710 c78bf19f3bebe20252179f2c6ecb7880 216 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 128 173 2.4E-14 T 22-04-2016 IPR014118 Type IV conjugative transfer system protein TraV VPUCM_RS06535 87ff44520c39e8a318af156da035ebc2 136 PANTHER PTHR30009 28 135 8.2E-40 T 22-04-2016 VPUCM_RS06535 87ff44520c39e8a318af156da035ebc2 136 PANTHER PTHR30009:SF6 28 135 8.2E-40 T 22-04-2016 VPUCM_RS06535 87ff44520c39e8a318af156da035ebc2 136 Pfam PF03918 Cytochrome C biogenesis protein 27 135 5.9E-42 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family VPUCM_RS06535 87ff44520c39e8a318af156da035ebc2 136 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 8 135 6.6E-49 T 22-04-2016 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF VPUCM_RS06065 c6614c6ff418a517363e89bf40cff2e6 197 Pfam PF16036 Chalcone isomerase-like 57 193 1.8E-7 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 VPUCM_RS05340 927c15a484b9dc5e6f59da53f69f44e1 355 SUPERFAMILY SSF52540 19 293 1.44E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05340 927c15a484b9dc5e6f59da53f69f44e1 355 Gene3D G3DSA:3.40.50.300 37 176 2.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VPUCM_RS05340 927c15a484b9dc5e6f59da53f69f44e1 355 Pfam PF05621 Bacterial TniB protein 15 284 4.1E-18 T 22-04-2016 IPR008868 Bacterial TniB VPUCM_RS00715 d60b69c8362c1e6726fd257b76634405 253 Pfam PF01203 Type II secretion system (T2SS), protein N 38 247 9.0E-58 T 22-04-2016 IPR022792 Type II secretion system, protein N VPUCM_RS00280 33165a5960d75dbd32c97a0ed14bcdae 334 Pfam PF05036 Sporulation related domain 73 142 2.6E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VPUCM_RS11670 9a302ef51c537d3db1acab9fd315561a 118 Pfam PF11169 Protein of unknown function (DUF2956) 12 115 8.9E-44 T 22-04-2016 IPR021339 Protein of unknown function DUF2956 VPUCM_RS09685 d4557b6e321b905dc0a84f43d0686a9a 231 PIRSF PIRSF028111 1 230 8.6E-85 T 22-04-2016 IPR016868 Bacteriophage B3, Orf5 VPUCM_RS09685 d4557b6e321b905dc0a84f43d0686a9a 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-12 T 22-04-2016 IPR024498 Domain of unknown function DUF2786 VPUCM_RS16045 31d43cb9eb83d115c8349cd45473793b 129 Pfam PF03899 ATP synthase I chain 15 111 5.3E-21 T 22-04-2016 IPR005598 ATP synthase protein I VPUCM_RS00070 88e328cd529ae83b54669d03e62aa382 138 SUPERFAMILY SSF54534 49 121 1.44E-10 T 22-04-2016 VPUCM_RS00070 88e328cd529ae83b54669d03e62aa382 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 119 1.8E-8 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VPUCM_RS00070 88e328cd529ae83b54669d03e62aa382 138 Gene3D G3DSA:3.10.50.30 48 119 2.5E-10 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VPUCM_RS10790 81f4c789ec3d65fa87ffa855b8df9b7e 241 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 238 49.633 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VPUCM_RS10790 81f4c789ec3d65fa87ffa855b8df9b7e 241 Pfam PF04288 MukE-like family 10 234 7.2E-118 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VPUCM_RS08300 49535af0006cc9818a13a0de09e9b5ec 107 Gene3D G3DSA:3.30.1150.10 19 86 1.8E-6 T 22-04-2016 VPUCM_RS08790 f965d6c8c9e57f3bcfe739189ad9dc51 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 2.1E-28 T 22-04-2016 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 VPUCM_RS08790 f965d6c8c9e57f3bcfe739189ad9dc51 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 22-04-2016 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 VPUCM_RS05025 896d731b127394bbd4c8541cb8f8548c 242 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 239 7.3E-76 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VPUCM_RS05025 896d731b127394bbd4c8541cb8f8548c 242 SUPERFAMILY SSF53901 37 156 6.58E-6 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VPUCM_RS11140 1529b5184589fcd4e856756f76f90de1 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 2.2E-75 T 22-04-2016 IPR021372 Protein of unknown function DUF2989 VPUCM_RS03500 421639d8aa9d3152f108514fa19c8517 64 SUPERFAMILY SSF46955 11 59 2.75E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain VPUCM_RS20695 c82278f0acd5a4a71ea313092bf7325d 164 PANTHER PTHR11814 1 149 9.9E-40 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VPUCM_RS20695 c82278f0acd5a4a71ea313092bf7325d 164 Pfam PF00916 Sulfate permease family 2 107 2.7E-24 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VPUCM_RS04320 b0ce7d8037384e0b71fe2e733e1a09e0 98 Pfam PF07130 YebG protein 1 71 2.1E-31 T 22-04-2016 IPR009813 Uncharacterised protein family YebG VPUCM_RS04320 b0ce7d8037384e0b71fe2e733e1a09e0 98 Gene3D G3DSA:1.10.10.710 20 85 1.1E-22 T 22-04-2016 IPR009813 Uncharacterised protein family YebG VPUCM_RS15725 288d8769b85052452865fbf1e889f115 151 Pfam PF07681 DoxX 27 108 2.9E-18 T 22-04-2016 IPR032808 DoxX family VPUCM_RS09245 cd5d9e7d50fb0b90879261102bd8ad7b 148 SUPERFAMILY SSF54909 9 114 2.52E-15 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VPUCM_RS09245 cd5d9e7d50fb0b90879261102bd8ad7b 148 Pfam PF11695 Domain of unknown function (DUF3291) 3 140 8.6E-58 T 22-04-2016 IPR021708 Domain of unknown function DUF3291 VPUCM_RS05370 c9fbb62a975304c1425d259c622aa798 403 Pfam PF06527 TniQ 5 156 4.4E-13 T 22-04-2016 IPR009492 TniQ VPUCM_RS07595 19551a27bd6366571d66463f5758e7ad 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 1.5E-43 T 22-04-2016 IPR020979 Uncharacterised protein family A0KLC6 VPUCM_RS01910 b0ad35929620e64070c6c814de2f7b9a 125 Pfam PF11777 Protein of unknown function (DUF3316) 5 118 8.7E-21 T 22-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 VPUCM_RS01910 b0ad35929620e64070c6c814de2f7b9a 125 PIRSF PIRSF028299 3 125 5.1E-30 T 22-04-2016 IPR016879 Uncharacterised conserved protein UCP028299 VPUCM_RS05280 ad98b249fbe72fc7ab69d4b731106837 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 3.5E-22 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VPUCM_RS05280 ad98b249fbe72fc7ab69d4b731106837 191 Gene3D G3DSA:2.40.160.20 13 167 2.9E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS05280 ad98b249fbe72fc7ab69d4b731106837 191 SUPERFAMILY SSF56925 31 191 9.68E-14 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VPUCM_RS08305 90d6e8d3bbef9b66469fd46fcb0e1e42 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 101 5.6E-43 T 22-04-2016 IPR022090 Protein of unknown function DUF3634 VPUCM_RS11675 67b159514575d1a63e2789466562f7e3 110 Pfam PF13698 Domain of unknown function (DUF4156) 23 108 3.0E-24 T 22-04-2016 IPR025294 Protein of unknown function DUF4156 VPUCM_RS05585 0f3f2c43b3620ec2ad8519cce104c7ba 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 514 1.2E-264 T 22-04-2016 IPR021794 Protein of unknown function DUF3360 VPUCM_RS03280 0e90d20789577836f8442e015ecf3b5b 412 Pfam PF11301 Protein of unknown function (DUF3103) 56 410 5.3E-181 T 22-04-2016 IPR021452 Protein of unknown function DUF3103 VPUCM_RS01565 50342edb4e15bd3a820fd3e7a1605937 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 39 152 8.9E-29 T 22-04-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VPUCM_RS08630 6e5ef01bf280447d8a47a78cda81eabd 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 5.7E-48 T 22-04-2016 IPR006972 Secretion system effector C, SseC-like GO:0009405 VPUCM_RS10920 4f45ada857840f7289c3d939c674847f 217 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 216 21.499 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VPUCM_RS10920 4f45ada857840f7289c3d939c674847f 217 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 32 213 1.9E-29 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VPUCM_RS14855 a02650c9f70ae83d5b106a4e4b6bc4b2 318 SUPERFAMILY SSF64182 5 317 8.5E-44 T 22-04-2016 VPUCM_RS15710 102826413a27fe477aaf26e67316e7da 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 1.7E-23 T 22-04-2016 IPR018740 Protein of unknown function DUF2282, integral membrane VPUCM_RS11955 7b17731b1a322ead51c2e865b9d5288f 116 SUPERFAMILY SSF54913 1 102 1.11E-21 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VPUCM_RS11955 7b17731b1a322ead51c2e865b9d5288f 116 SMART SM00938 6 104 7.6E-6 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VPUCM_RS11955 7b17731b1a322ead51c2e865b9d5288f 116 Gene3D G3DSA:3.30.70.120 3 103 1.7E-10 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VPUCM_RS07830 a9f3cbc5b2f20d4ef55bd651f3514dad 434 Pfam PF06629 MltA-interacting protein MipA 42 237 2.6E-21 T 22-04-2016 IPR010583 MltA-interacting MipA VPUCM_RS07775 464990b57b6667d6108e9962f8b3340e 447 Pfam PF03616 Sodium/glutamate symporter 8 350 2.7E-13 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VPUCM_RS13545 27195a26603c89387553c68e302840aa 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 8.4E-49 T 22-04-2016 IPR025218 Domain of unknown function DUF4426 VPUCM_RS02290 90811434a2f45252235facd4279e5bb4 151 Pfam PF05258 Protein of unknown function (DUF721) 11 85 5.3E-13 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 VPUCM_RS01265 64ee26651a6c75e36b06d955762a6b5a 264 Pfam PF03567 Sulfotransferase family 29 253 4.6E-14 T 22-04-2016 IPR005331 Sulfotransferase GO:0008146|GO:0016021 VPUCM_RS06980 9013bf1d708429390a9844a21f4eede9 200 Pfam PF13643 Domain of unknown function (DUF4145) 93 173 2.1E-10 T 22-04-2016 IPR025285 Domain of unknown function DUF4145 VPUCM_RS03815 5b3ff17f3a734fad19e88adaeea30579 317 Pfam PF11348 Protein of unknown function (DUF3150) 6 259 2.6E-100 T 22-04-2016 IPR021496 Protein of unknown function DUF3150 VPUCM_RS07175 b742b226415da2074b71488d65e1fb46 157 Gene3D G3DSA:3.30.420.40 8 137 6.6E-9 T 22-04-2016 VPUCM_RS10365 5dacce7e0f05d57c82561f4d7819d2c0 376 Pfam PF03916 Polysulphide reductase, NrfD 9 318 7.2E-18 T 22-04-2016 IPR005614 NrfD family VPUCM_RS14865 f8d27142aa74d06966cb35a8c19a0dbe 124 Pfam PF04892 VanZ like family 36 109 1.1E-8 T 22-04-2016 IPR006976 VanZ-like VPUCM_RS15785 c2eb5ada48f05f8ee4f7910d7ec2adc8 49 Pfam PF13592 Winged helix-turn helix 14 49 2.2E-8 T 22-04-2016 IPR025959 Winged helix-turn helix domain VPUCM_RS19700 cdfea5e0c353f467da53c77189a8e761 160 Pfam PF05309 TraE protein 1 152 7.3E-27 T 22-04-2016 IPR007973 Pilus assembly TraE GO:0000746 VPUCM_RS04150 4ca4560a1c2082bad62826858d45288d 422 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 18 60 3.5E-9 T 22-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VPUCM_RS08830 00f6aada53615326f4593d1ce8010032 326 Pfam PF16806 Antiactivator protein ExsD 52 309 2.1E-97 T 22-04-2016 IPR031835 Antiactivator protein ExsD VPUCM_RS05300 11b7b4b468a502f3550f0f8e1d0ae2f5 1014 Gene3D G3DSA:2.60.40.1080 75 116 4.4E-4 T 22-04-2016 VPUCM_RS03605 064aa298354d6a0b1a32698cb347cc07 156 Pfam PF06146 Phosphate-starvation-inducible E 74 142 8.1E-17 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VPUCM_RS15460 491c42c8ce65c657fed9e36f5daf27c0 206 Pfam PF07947 YhhN-like protein 26 204 3.2E-32 T 22-04-2016 IPR012506 YhhN-like GO:0016021 VPUCM_RS07180 fa8e3dff9b330fe091926b5e37dbfbe1 90 Pfam PF04973 Nicotinamide mononucleotide transporter 9 83 9.9E-7 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 VPUCM_RS13820 027d1f1cc4a827f965d5d8427c99b64c 134 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.7E-20 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VPUCM_RS13820 027d1f1cc4a827f965d5d8427c99b64c 134 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 8.1E-21 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VPUCM_RS11410 dc8542158a6eff4c895787a085a615e8 242 Pfam PF11859 Protein of unknown function (DUF3379) 1 238 2.9E-86 T 22-04-2016 IPR021806 Protein of unknown function DUF3379 VPUCM_RS00765 3139e006006a50b3cf4267c6bc685a55 130 Pfam PF06476 Protein of unknown function (DUF1090) 16 117 3.7E-32 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 VPUCM_RS04765 e124c989db2d7da4d4b117e48d16fe7c 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 6.3E-137 T 22-04-2016 IPR020010 Conserved hypothetical protein CHP03503 VPUCM_RS15905 981b9fef328feb97a02c157ca39f17fc 194 Pfam PF11355 Protein of unknown function (DUF3157) 2 193 7.8E-76 T 22-04-2016 IPR021501 Protein of unknown function DUF3157 VPUCM_RS08240 64812f4204a142a3e33495487509be72 110 Pfam PF10734 Protein of unknown function (DUF2523) 30 107 1.7E-5 T 22-04-2016 IPR019670 Protein of unkown function DUF2523 VPUCM_RS09795 7c05199ab94c1dc6471ffe384a98241b 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.2E-38 T 22-04-2016 IPR010352 Protein of unknown function DUF945 VPUCM_RS21585 9aa7bac53f7772a9427449e7bdba02a9 351 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 244 347 1.9E-6 T 22-04-2016 IPR031161 Peptidase family M60 domain VPUCM_RS13840 b24a71a731cc7dda0138545c013bbcec 80 Gene3D G3DSA:1.20.5.340 41 73 4.0E-4 T 22-04-2016 VPUCM_RS11475 fbed331714efcb2e5aa6e1c5604154f0 163 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 6.3E-23 T 22-04-2016 IPR021244 Protein of unknown function DUF2802 VPUCM_RS08010 498e838e0a480d05f4bdcb311c0f4a6d 297 Pfam PF15575 Immunity protein 49 73 281 2.1E-40 T 22-04-2016 IPR029074 Immunity protein 49 VPUCM_RS11930 0b301bffa2d8fb5aba2d0e2a910a3f01 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 6.0E-95 T 22-04-2016 VPUCM_RS08070 81d9a412a17fe543fb3c78e500d989d0 299 Pfam PF15575 Immunity protein 49 77 283 8.9E-42 T 22-04-2016 IPR029074 Immunity protein 49 VPUCM_RS03695 1474499adf72e671a548694b62b1fd57 208 Pfam PF05309 TraE protein 2 177 1.7E-30 T 22-04-2016 IPR007973 Pilus assembly TraE GO:0000746 VPUCM_RS06560 34bebd954840fedcf9a3f0427a8b27be 345 Pfam PF09375 Imelysin 48 324 2.7E-43 T 22-04-2016 VPUCM_RS04455 d5db7c624566661e456c210d38869080 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 1.4E-51 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG VPUCM_RS08160 599e54f645d97c9bc86fddef94846f07 158 Pfam PF05751 FixH 7 147 2.2E-40 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH VPUCM_RS07005 66039f8ab887a1335f344320e62f3aa3 106 ProDom PD394905 PM1122 UNCHARACTERIZED 19 106 1.0E-19 T 22-04-2016 VPUCM_RS12180 1a4d857fa8561ee85e407ab2711e57c7 212 PIRSF PIRSF028688 1 212 2.6E-118 T 22-04-2016 IPR014549 Flagellar protein FlgO VPUCM_RS23625 0555716672ba6cd1419ac2cc560d07f0 72 Pfam PF11638 DnaA N-terminal domain 1 28 2.5E-7 T 22-04-2016 IPR024633 DnaA N-terminal domain