locus-tag class description D0853_RS00005 PF11638 DnaA N-terminal domain D0853_RS00005 PF00308 Bacterial dnaA protein D0853_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix D0853_RS00010 PF02767 DNA polymerase III beta subunit, central domain D0853_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D0853_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D0853_RS00015 PF02463 RecF/RecN/SMC N terminal domain D0853_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS00020 PF01751 Toprim domain D0853_RS00020 PF18053 DNA gyrase B subunit insert domain D0853_RS00020 PF00204 DNA gyrase B D0853_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus D0853_RS00040 PF00011 Hsp20/alpha crystallin family D0853_RS00045 PF00155 Aminotransferase class I and II D0853_RS00050 PF00128 Alpha amylase, catalytic domain D0853_RS00055 PF02092 Glycyl-tRNA synthetase beta subunit D0853_RS00055 PF05746 DALR anticodon binding domain D0853_RS00060 PF02091 Glycyl-tRNA synthetase alpha subunit D0853_RS00065 PF01169 Uncharacterized protein family UPF0016 D0853_RS00075 PF01206 Sulfurtransferase TusA D0853_RS00085 PF03466 LysR substrate binding domain D0853_RS00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS00090 PF08240 Alcohol dehydrogenase GroES-like domain D0853_RS00090 PF00107 Zinc-binding dehydrogenase D0853_RS00095 PF02803 Thiolase, C-terminal domain D0853_RS00095 PF00108 Thiolase, N-terminal domain D0853_RS00100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0853_RS00100 PF00378 Enoyl-CoA hydratase/isomerase D0853_RS00100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0853_RS00105 PF01205 Uncharacterized protein family UPF0029 D0853_RS00105 PF09186 Domain of unknown function (DUF1949) D0853_RS00110 PF02386 Cation transport protein D0853_RS00115 PF12724 Flavodoxin domain D0853_RS00180 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D0853_RS00185 PF13667 ThiC-associated domain D0853_RS00185 PF01964 Radical SAM ThiC family D0853_RS00190 PF02581 Thiamine monophosphate synthase D0853_RS00195 PF00899 ThiF family D0853_RS00200 PF02597 ThiS family D0853_RS00205 PF05690 Thiazole biosynthesis protein ThiG D0853_RS00210 PF04055 Radical SAM superfamily D0853_RS00210 PF06968 Biotin and Thiamin Synthesis associated domain D0853_RS00215 PF01321 Creatinase/Prolidase N-terminal domain D0853_RS00215 PF00557 Metallopeptidase family M24 D0853_RS00215 PF00557 Metallopeptidase family M24 D0853_RS00215 PF01321 Creatinase/Prolidase N-terminal domain D0853_RS00220 PF03466 LysR substrate binding domain D0853_RS00220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS00225 PF07690 Major Facilitator Superfamily D0853_RS00245 PF05114 Protein of unknown function (DUF692) D0853_RS00255 PF13361 UvrD-like helicase C-terminal domain D0853_RS00255 PF00580 UvrD/REP helicase N-terminal domain D0853_RS00270 PF01810 LysE type translocator D0853_RS00280 PF00892 EamA-like transporter family D0853_RS00285 PF09382 RQC domain D0853_RS00285 PF00271 Helicase conserved C-terminal domain D0853_RS00285 PF00570 HRDC domain D0853_RS00285 PF00270 DEAD/DEAH box helicase D0853_RS00285 PF16124 RecQ zinc-binding D0853_RS00300 PF02592 Putative vitamin uptake transporter D0853_RS00305 PF02541 Ppx/GppA phosphatase family D0853_RS00310 PF00270 DEAD/DEAH box helicase D0853_RS00310 PF00271 Helicase conserved C-terminal domain D0853_RS00315 PF00085 Thioredoxin D0853_RS00320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0853_RS00320 PF07498 Rho termination factor, N-terminal domain D0853_RS00320 PF07497 Rho termination factor, RNA-binding domain D0853_RS00335 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D0853_RS00340 PF00111 2Fe-2S iron-sulfur cluster binding domain D0853_RS00345 PF00175 Oxidoreductase NAD-binding domain D0853_RS00390 PF07219 HemY protein N-terminus D0853_RS00395 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D0853_RS00400 PF02602 Uroporphyrinogen-III synthase HemD D0853_RS00405 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D0853_RS00405 PF03900 Porphobilinogen deaminase, C-terminal domain D0853_RS00410 PF12633 Adenylate cyclase NT domain D0853_RS00410 PF01295 Adenylate cyclase, class-I D0853_RS00415 PF01491 Frataxin-like domain D0853_RS00425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0853_RS00425 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0853_RS00430 PF01678 Diaminopimelate epimerase D0853_RS00440 PF00589 Phage integrase family D0853_RS00440 PF02899 Phage integrase, N-terminal SAM-like domain D0853_RS00445 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS00450 PF08495 FIST N domain D0853_RS00450 PF10442 FIST C domain D0853_RS00450 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS00450 PF00563 EAL domain D0853_RS00455 PF03942 DTW domain D0853_RS00480 PF12146 Serine aminopeptidase, S33 D0853_RS00485 PF01810 LysE type translocator D0853_RS00490 PF00563 EAL domain D0853_RS00490 PF08668 HDOD domain D0853_RS00495 PF01022 Bacterial regulatory protein, arsR family D0853_RS00500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0853_RS00500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0853_RS00555 PF01914 MarC family integral membrane protein D0853_RS00570 PF02881 SRP54-type protein, helical bundle domain D0853_RS00570 PF00448 SRP54-type protein, GTPase domain D0853_RS00575 PF00005 ABC transporter D0853_RS00580 PF18075 FtsX extracellular domain D0853_RS00585 PF00140 Sigma-70 factor, region 1.2 D0853_RS00585 PF04542 Sigma-70 region 2 D0853_RS00585 PF04545 Sigma-70, region 4 D0853_RS00595 PF00581 Rhodanese-like domain D0853_RS00600 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D0853_RS00600 PF01694 Rhomboid family D0853_RS00605 PF03748 Flagellar basal body-associated protein FliL D0853_RS00610 PF04345 Chorismate lyase D0853_RS00615 PF01040 UbiA prenyltransferase family D0853_RS00620 PF01553 Acyltransferase D0853_RS00635 PF00717 Peptidase S24-like D0853_RS00635 PF01726 LexA DNA binding domain D0853_RS00640 PF04072 Leucine carboxyl methyltransferase D0853_RS00645 PF01554 MatE D0853_RS00650 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS00650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0853_RS00655 PF00440 Bacterial regulatory proteins, tetR family D0853_RS00665 PF05958 tRNA (Uracil-5-)-methyltransferase D0853_RS00670 PF07715 TonB-dependent Receptor Plug Domain D0853_RS00670 PF00593 TonB dependent receptor D0853_RS00680 PF01177 Asp/Glu/Hydantoin racemase D0853_RS00740 PF13091 PLD-like domain D0853_RS00750 PF01565 FAD binding domain D0853_RS00750 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D0853_RS00755 PF08279 HTH domain D0853_RS00755 PF02237 Biotin protein ligase C terminal domain D0853_RS00755 PF03099 Biotin/lipoate A/B protein ligase family D0853_RS00760 PF00485 Phosphoribulokinase / Uridine kinase family D0853_RS00785 PF00009 Elongation factor Tu GTP binding domain D0853_RS00785 PF03143 Elongation factor Tu C-terminal domain D0853_RS00785 PF03144 Elongation factor Tu domain 2 D0853_RS00795 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D0853_RS00800 PF02357 Transcription termination factor nusG D0853_RS00800 PF00467 KOW motif D0853_RS00805 PF00298 Ribosomal protein L11, RNA binding domain D0853_RS00805 PF03946 Ribosomal protein L11, N-terminal domain D0853_RS00810 PF00687 Ribosomal protein L1p/L10e family D0853_RS00815 PF00466 Ribosomal protein L10 D0853_RS00820 PF16320 Ribosomal protein L7/L12 dimerisation domain D0853_RS00820 PF00542 Ribosomal protein L7/L12 C-terminal domain D0853_RS00825 PF10385 RNA polymerase beta subunit external 1 domain D0853_RS00825 PF04563 RNA polymerase beta subunit D0853_RS00825 PF04560 RNA polymerase Rpb2, domain 7 D0853_RS00825 PF00562 RNA polymerase Rpb2, domain 6 D0853_RS00825 PF04561 RNA polymerase Rpb2, domain 2 D0853_RS00825 PF04565 RNA polymerase Rpb2, domain 3 D0853_RS00830 PF04983 RNA polymerase Rpb1, domain 3 D0853_RS00830 PF05000 RNA polymerase Rpb1, domain 4 D0853_RS00830 PF04997 RNA polymerase Rpb1, domain 1 D0853_RS00830 PF00623 RNA polymerase Rpb1, domain 2 D0853_RS00830 PF04998 RNA polymerase Rpb1, domain 5 D0853_RS00835 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D0853_RS00840 PF09297 NADH pyrophosphatase zinc ribbon domain D0853_RS00840 PF00293 NUDIX domain D0853_RS00855 PF01208 Uroporphyrinogen decarboxylase (URO-D) D0853_RS00860 PF03167 Uracil DNA glycosylase superfamily D0853_RS00865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0853_RS00870 PF04222 Protein of unknown function (DUF416) D0853_RS00875 PF00571 CBS domain D0853_RS00875 PF01595 Cyclin M transmembrane N-terminal domain D0853_RS00880 PF00216 Bacterial DNA-binding protein D0853_RS00945 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D0853_RS00945 PF02843 Phosphoribosylglycinamide synthetase, C domain D0853_RS00945 PF02844 Phosphoribosylglycinamide synthetase, N domain D0853_RS00955 PF02142 MGS-like domain D0853_RS00955 PF01808 AICARFT/IMPCHase bienzyme D0853_RS00965 PF13411 MerR HTH family regulatory protein D0853_RS00970 PF00486 Transcriptional regulatory protein, C terminal D0853_RS00970 PF18500 CadC C-terminal domain 1 D0853_RS00980 PF13520 Amino acid permease D0853_RS00985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0853_RS00985 PF01276 Orn/Lys/Arg decarboxylase, major domain D0853_RS00985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0853_RS01070 PF05230 MASE2 domain D0853_RS01070 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS01075 PF00005 ABC transporter D0853_RS01075 PF12848 ABC transporter D0853_RS01080 PF07690 Major Facilitator Superfamily D0853_RS01085 PF02954 Bacterial regulatory protein, Fis family D0853_RS01090 PF01207 Dihydrouridine synthase (Dus) D0853_RS01105 PF02785 Biotin carboxylase C-terminal domain D0853_RS01105 PF00289 Biotin carboxylase, N-terminal domain D0853_RS01105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0853_RS01110 PF00364 Biotin-requiring enzyme D0853_RS01115 PF01220 Dehydroquinase class II D0853_RS01120 PF13193 AMP-binding enzyme C-terminal domain D0853_RS01120 PF16177 Acetyl-coenzyme A synthetase N-terminus D0853_RS01120 PF00501 AMP-binding enzyme D0853_RS01135 PF12832 MFS_1 like family D0853_RS01140 PF00072 Response regulator receiver domain D0853_RS01140 PF09308 LuxQ, periplasmic D0853_RS01140 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS01140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS01145 PF10415 Fumarase C C-terminus D0853_RS01145 PF00206 Lyase D0853_RS01165 PF00474 Sodium:solute symporter family D0853_RS01175 PF03471 Transporter associated domain D0853_RS01175 PF02080 TrkA-C domain D0853_RS01175 PF00999 Sodium/hydrogen exchanger family D0853_RS01180 PF00196 Bacterial regulatory proteins, luxR family D0853_RS01180 PF00072 Response regulator receiver domain D0853_RS01185 PF02683 Cytochrome C biogenesis protein transmembrane region D0853_RS01185 PF11412 Disulphide bond corrector protein DsbC D0853_RS01190 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0853_RS01195 PF10415 Fumarase C C-terminus D0853_RS01195 PF00206 Lyase D0853_RS01200 PF04186 FxsA cytoplasmic membrane protein D0853_RS01205 PF00588 SpoU rRNA Methylase family D0853_RS01210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0853_RS01210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0853_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS01215 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS01215 PF16527 Two-component sensor protein CpxA, periplasmic domain D0853_RS01215 PF00672 HAMP domain D0853_RS01220 PF00072 Response regulator receiver domain D0853_RS01220 PF00486 Transcriptional regulatory protein, C terminal D0853_RS01230 PF07813 LTXXQ motif family protein D0853_RS01235 PF16916 Dimerisation domain of Zinc Transporter D0853_RS01235 PF01545 Cation efflux family D0853_RS01240 PF00365 Phosphofructokinase D0853_RS01245 PF01554 MatE D0853_RS01250 PF00166 Chaperonin 10 Kd subunit D0853_RS01255 PF00118 TCP-1/cpn60 chaperonin family D0853_RS01265 PF02308 MgtC family D0853_RS01270 PF00842 Alanine racemase, C-terminal domain D0853_RS01270 PF01168 Alanine racemase, N-terminal domain D0853_RS01280 PF04055 Radical SAM superfamily D0853_RS01285 PF08207 Elongation factor P (EF-P) KOW-like domain D0853_RS01285 PF01132 Elongation factor P (EF-P) OB domain D0853_RS01285 PF09285 Elongation factor P, C-terminal D0853_RS01295 PF02313 Fumarate reductase subunit D D0853_RS01300 PF02300 Fumarate reductase subunit C D0853_RS01305 PF13085 2Fe-2S iron-sulfur cluster binding domain D0853_RS01305 PF13183 4Fe-4S dicluster domain D0853_RS01310 PF00890 FAD binding domain D0853_RS01310 PF02910 Fumarate reductase flavoprotein C-term D0853_RS01320 PF00152 tRNA synthetases class II (D, K and N) D0853_RS01330 PF08360 QacR-like protein, C-terminal region D0853_RS01330 PF00440 Bacterial regulatory proteins, tetR family D0853_RS01340 PF01551 Peptidase family M23 D0853_RS01345 PF06426 Serine acetyltransferase, N-terminal D0853_RS01345 PF00132 Bacterial transferase hexapeptide (six repeats) D0853_RS01350 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D0853_RS01350 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D0853_RS01355 PF02556 Preprotein translocase subunit SecB D0853_RS01360 PF00581 Rhodanese-like domain D0853_RS01370 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D0853_RS01370 PF01676 Metalloenzyme superfamily D0853_RS01380 PF00672 HAMP domain D0853_RS01380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS01385 PF00939 Sodium:sulfate symporter transmembrane region D0853_RS01390 PF02666 Phosphatidylserine decarboxylase D0853_RS01395 PF03193 RsgA GTPase D0853_RS01400 PF00929 Exonuclease D0853_RS01480 PF08331 Domain of unknown function (DUF1730) D0853_RS01485 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D0853_RS01490 PF01520 N-acetylmuramoyl-L-alanine amidase D0853_RS01495 PF01119 DNA mismatch repair protein, C-terminal domain D0853_RS01495 PF08676 MutL C terminal dimerisation domain D0853_RS01505 PF17209 Hfq protein D0853_RS01510 PF13167 GTP-binding GTPase N-terminal D0853_RS01510 PF01926 50S ribosome-binding GTPase D0853_RS01510 PF16360 GTP-binding GTPase Middle Region D0853_RS01515 PF01145 SPFH domain / Band 7 family D0853_RS01515 PF12221 Bacterial membrane protein N terminal D0853_RS01520 PF01145 SPFH domain / Band 7 family D0853_RS01525 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D0853_RS01530 PF00709 Adenylosuccinate synthetase D0853_RS01540 PF08238 Sel1 repeat D0853_RS01545 PF00042 Globin D0853_RS01545 PF00175 Oxidoreductase NAD-binding domain D0853_RS01545 PF00970 Oxidoreductase FAD-binding domain D0853_RS01550 PF02082 Transcriptional regulator D0853_RS01555 PF17876 Cold shock domain D0853_RS01555 PF08461 Ribonuclease R winged-helix domain D0853_RS01555 PF08206 Ribonuclease B OB domain D0853_RS01555 PF00773 RNB domain D0853_RS01555 PF00575 S1 RNA binding domain D0853_RS01560 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0853_RS01560 PF00588 SpoU rRNA Methylase family D0853_RS01565 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS01570 PF00579 tRNA synthetases class I (W and Y) D0853_RS01600 PF00117 Glutamine amidotransferase class-I D0853_RS01605 PF00202 Aminotransferase class-III D0853_RS01610 PF04958 Arginine N-succinyltransferase beta subunit D0853_RS01615 PF00171 Aldehyde dehydrogenase family D0853_RS01625 PF13545 Crp-like helix-turn-helix domain D0853_RS01625 PF00027 Cyclic nucleotide-binding domain D0853_RS01630 PF00485 Phosphoribulokinase / Uridine kinase family D0853_RS01635 PF06794 Uncharacterised protein family (UPF0270) D0853_RS01640 PF00561 alpha/beta hydrolase fold D0853_RS01650 PF12848 ABC transporter D0853_RS01650 PF00005 ABC transporter D0853_RS01660 PF02525 Flavodoxin-like fold D0853_RS01665 PF00999 Sodium/hydrogen exchanger family D0853_RS01665 PF02254 TrkA-N domain D0853_RS01675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0853_RS01685 PF01112 Asparaginase D0853_RS01690 PF04102 SlyX D0853_RS01700 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0853_RS01700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0853_RS01705 PF13309 HTH domain D0853_RS01705 PF08348 YheO-like PAS domain D0853_RS01710 PF02635 DsrE/DsrF-like family D0853_RS01715 PF02635 DsrE/DsrF-like family D0853_RS01720 PF04077 DsrH like protein D0853_RS01725 PF00164 Ribosomal protein S12/S23 D0853_RS01730 PF00177 Ribosomal protein S7p/S5e D0853_RS01735 PF03764 Elongation factor G, domain IV D0853_RS01735 PF14492 Elongation Factor G, domain II D0853_RS01735 PF00679 Elongation factor G C-terminus D0853_RS01735 PF03144 Elongation factor Tu domain 2 D0853_RS01735 PF00009 Elongation factor Tu GTP binding domain D0853_RS01740 PF00009 Elongation factor Tu GTP binding domain D0853_RS01740 PF03144 Elongation factor Tu domain 2 D0853_RS01740 PF03143 Elongation factor Tu C-terminal domain D0853_RS01745 PF04324 BFD-like [2Fe-2S] binding domain D0853_RS01750 PF00210 Ferritin-like domain D0853_RS01755 PF03949 Malic enzyme, NAD binding domain D0853_RS01755 PF00390 Malic enzyme, N-terminal domain D0853_RS01760 PF01340 Met Apo-repressor, MetJ D0853_RS01765 PF01053 Cys/Met metabolism PLP-dependent enzyme D0853_RS01770 PF00742 Homoserine dehydrogenase D0853_RS01770 PF00696 Amino acid kinase family D0853_RS01770 PF03447 Homoserine dehydrogenase, NAD binding domain D0853_RS01775 PF02219 Methylenetetrahydrofolate reductase D0853_RS01785 PF00311 Phosphoenolpyruvate carboxylase D0853_RS01790 PF01546 Peptidase family M20/M25/M40 D0853_RS01790 PF07687 Peptidase dimerisation domain D0853_RS01795 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0853_RS01795 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0853_RS01800 PF00696 Amino acid kinase family D0853_RS01805 PF00764 Arginosuccinate synthase D0853_RS01810 PF00583 Acetyltransferase (GNAT) family D0853_RS01810 PF14698 Argininosuccinate lyase C-terminal D0853_RS01810 PF00206 Lyase D0853_RS01825 PF08534 Redoxin D0853_RS01825 PF00462 Glutaredoxin D0853_RS01830 PF03466 LysR substrate binding domain D0853_RS01830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS01835 PF17092 Penicillin-binding protein OB-like domain D0853_RS01835 PF00912 Transglycosylase D0853_RS01835 PF00905 Penicillin binding protein transpeptidase domain D0853_RS01845 PF05137 Fimbrial assembly protein (PilN) D0853_RS01855 PF04351 Pilus assembly protein, PilP D0853_RS01860 PF07660 Secretin and TonB N terminus short domain D0853_RS01860 PF03958 Bacterial type II/III secretion system short domain D0853_RS01860 PF00263 Bacterial type II and III secretion system protein D0853_RS01860 PF11741 AMIN domain D0853_RS01865 PF01202 Shikimate kinase D0853_RS01870 PF01761 3-dehydroquinate synthase D0853_RS01880 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0853_RS01885 PF00834 Ribulose-phosphate 3 epimerase family D0853_RS01890 PF01250 Ribosomal protein S6 D0853_RS01895 PF00436 Single-strand binding protein family D0853_RS01900 PF01084 Ribosomal protein S18 D0853_RS01905 PF03948 Ribosomal protein L9, C-terminal domain D0853_RS01905 PF01281 Ribosomal protein L9, N-terminal domain D0853_RS01915 PF03796 DnaB-like helicase C terminal domain D0853_RS01915 PF00772 DnaB-like helicase N terminal domain D0853_RS01920 PF01168 Alanine racemase, N-terminal domain D0853_RS01920 PF00842 Alanine racemase, C-terminal domain D0853_RS01930 PF01894 Uncharacterised protein family UPF0047 D0853_RS01935 PF00342 Phosphoglucose isomerase D0853_RS01945 PF01475 Ferric uptake regulator family D0853_RS01955 PF01207 Dihydrouridine synthase (Dus) D0853_RS01980 PF00175 Oxidoreductase NAD-binding domain D0853_RS01980 PF00258 Flavodoxin D0853_RS01980 PF00667 FAD binding domain D0853_RS01985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0853_RS01985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0853_RS01990 PF01507 Phosphoadenosine phosphosulfate reductase family D0853_RS02070 PF00999 Sodium/hydrogen exchanger family D0853_RS02075 PF00809 Pterin binding enzyme D0853_RS02075 PF02607 B12 binding domain D0853_RS02075 PF02965 Vitamin B12 dependent methionine synthase, activation domain D0853_RS02075 PF02310 B12 binding domain D0853_RS02075 PF02574 Homocysteine S-methyltransferase D0853_RS02080 PF00696 Amino acid kinase family D0853_RS02080 PF01842 ACT domain D0853_RS02090 PF00266 Aminotransferase class-V D0853_RS02100 PF00005 ABC transporter D0853_RS02100 PF17755 UvrA DNA-binding domain D0853_RS02100 PF17760 UvrA interaction domain D0853_RS02105 PF00483 Nucleotidyl transferase D0853_RS02110 PF00196 Bacterial regulatory proteins, luxR family D0853_RS02115 PF00436 Single-strand binding protein family D0853_RS02120 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS02120 PF17157 Gammaproteobacterial periplasmic sensor domain D0853_RS02120 PF00563 EAL domain D0853_RS02140 PF11741 AMIN domain D0853_RS02140 PF07660 Secretin and TonB N terminus short domain D0853_RS02140 PF00263 Bacterial type II and III secretion system protein D0853_RS02140 PF03958 Bacterial type II/III secretion system short domain D0853_RS02145 PF01471 Putative peptidoglycan binding domain D0853_RS02145 PF13401 AAA domain D0853_RS02155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0853_RS02155 PF00437 Type II/IV secretion system protein D0853_RS02160 PF00482 Type II secretion system (T2SS), protein F D0853_RS02170 PF07963 Prokaryotic N-terminal methylation motif D0853_RS02210 PF04085 rod shape-determining protein MreC D0853_RS02215 PF04093 rod shape-determining protein MreD D0853_RS02220 PF02545 Maf-like protein D0853_RS02225 PF10150 Ribonuclease E/G family D0853_RS02225 PF00575 S1 RNA binding domain D0853_RS02230 PF13116 Protein of unknown function D0853_RS02230 PF13502 AsmA-like C-terminal region D0853_RS02235 PF00795 Carbon-nitrogen hydrolase D0853_RS02240 PF01523 Putative modulator of DNA gyrase D0853_RS02245 PF02562 PhoH-like protein D0853_RS02245 PF13638 PIN domain D0853_RS02250 PF00176 SNF2 family N-terminal domain D0853_RS02250 PF12137 RNA polymerase recycling family C-terminal D0853_RS02250 PF00271 Helicase conserved C-terminal domain D0853_RS02250 PF18337 RapA N-terminal Tudor like domain D0853_RS02250 PF18339 RapA N-terminal Tudor like domain 1 D0853_RS02265 PF00849 RNA pseudouridylate synthase D0853_RS02270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0853_RS02270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0853_RS02275 PF04751 Protein of unknown function (DUF615) D0853_RS02280 PF01523 Putative modulator of DNA gyrase D0853_RS02285 PF00571 CBS domain D0853_RS02285 PF01769 Divalent cation transporter D0853_RS02285 PF03448 MgtE intracellular N domain D0853_RS02290 PF00381 PTS HPr component phosphorylation site D0853_RS02295 PF03668 P-loop ATPase protein family D0853_RS02300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0853_RS02305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0853_RS02310 PF00309 Sigma-54 factor, Activator interacting domain (AID) D0853_RS02310 PF04963 Sigma-54 factor, core binding domain D0853_RS02310 PF04552 Sigma-54, DNA binding domain D0853_RS02315 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0853_RS02315 PF00005 ABC transporter D0853_RS02320 PF03968 OstA-like protein D0853_RS02330 PF01380 SIS domain D0853_RS02330 PF00571 CBS domain D0853_RS02335 PF01699 Sodium/calcium exchanger protein D0853_RS02340 PF00005 ABC transporter D0853_RS02345 PF02405 Permease MlaE D0853_RS02350 PF02470 MlaD protein D0853_RS02355 PF05494 MlaC protein D0853_RS02365 PF01722 BolA-like protein D0853_RS02370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0853_RS02375 PF01553 Acyltransferase D0853_RS02380 PF01042 Endoribonuclease L-PSP D0853_RS02385 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D0853_RS02385 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D0853_RS02390 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0853_RS02390 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0853_RS02400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D0853_RS02400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D0853_RS02415 PF06877 Regulator of ribonuclease activity B D0853_RS02425 PF00583 Acetyltransferase (GNAT) family D0853_RS02435 PF10458 Valyl tRNA synthetase tRNA binding arm D0853_RS02435 PF00133 tRNA synthetases class I (I, L, M and V) D0853_RS02435 PF08264 Anticodon-binding domain of tRNA D0853_RS02440 PF04364 DNA polymerase III chi subunit, HolC D0853_RS02445 PF02789 Cytosol aminopeptidase family, N-terminal domain D0853_RS02445 PF00883 Cytosol aminopeptidase family, catalytic domain D0853_RS02450 PF03739 Lipopolysaccharide export system permease LptF/LptG D0853_RS02455 PF03739 Lipopolysaccharide export system permease LptF/LptG D0853_RS02465 PF10011 Predicted membrane protein (DUF2254) D0853_RS02470 PF00106 short chain dehydrogenase D0853_RS02480 PF01522 Polysaccharide deacetylase D0853_RS02485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0853_RS02490 PF02378 Phosphotransferase system, EIIC D0853_RS02495 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit D0853_RS02500 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0853_RS02500 PF02056 Family 4 glycosyl hydrolase D0853_RS02505 PF04794 YdjC-like protein D0853_RS02510 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0853_RS02510 PF00356 Bacterial regulatory proteins, lacI family D0853_RS02515 PF00072 Response regulator receiver domain D0853_RS02565 PF00171 Aldehyde dehydrogenase family D0853_RS02595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS02595 PF17200 Single Cache domain 2 D0853_RS02595 PF00672 HAMP domain D0853_RS02635 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D0853_RS02635 PF01464 Transglycosylase SLT domain D0853_RS02640 PF04362 Bacterial Fe(2+) trafficking D0853_RS02645 PF00730 HhH-GPD superfamily base excision DNA repair protein D0853_RS02645 PF14815 NUDIX domain D0853_RS02645 PF00633 Helix-hairpin-helix motif D0853_RS02650 PF02390 Putative methyltransferase D0853_RS02655 PF02086 D12 class N6 adenine-specific DNA methyltransferase D0853_RS02660 PF04960 Glutaminase D0853_RS02665 PF04055 Radical SAM superfamily D0853_RS02665 PF06969 HemN C-terminal domain D0853_RS02670 PF01725 Ham1 family D0853_RS02680 PF02594 Uncharacterised ACR, YggU family COG1872 D0853_RS02685 PF02325 YGGT family D0853_RS02690 PF03807 NADP oxidoreductase coenzyme F420-dependent D0853_RS02690 PF14748 Pyrroline-5-carboxylate reductase dimerisation D0853_RS02695 PF01168 Alanine racemase, N-terminal domain D0853_RS02700 PF00437 Type II/IV secretion system protein D0853_RS02705 PF00437 Type II/IV secretion system protein D0853_RS02710 PF03652 Holliday junction resolvase D0853_RS02715 PF02622 Uncharacterized ACR, COG1678 D0853_RS02720 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D0853_RS02720 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D0853_RS02725 PF04452 RNA methyltransferase D0853_RS02730 PF04231 Endonuclease I D0853_RS02735 PF10263 SprT-like family D0853_RS02735 PF17283 SprT-like zinc ribbon domain D0853_RS02745 PF02773 S-adenosylmethionine synthetase, C-terminal domain D0853_RS02745 PF02772 S-adenosylmethionine synthetase, central domain D0853_RS02745 PF00438 S-adenosylmethionine synthetase, N-terminal domain D0853_RS02755 PF00456 Transketolase, thiamine diphosphate binding domain D0853_RS02755 PF02780 Transketolase, C-terminal domain D0853_RS02755 PF02779 Transketolase, pyrimidine binding domain D0853_RS02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS02760 PF03466 LysR substrate binding domain D0853_RS02765 PF07715 TonB-dependent Receptor Plug Domain D0853_RS02765 PF00593 TonB dependent receptor D0853_RS02770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0853_RS02770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0853_RS02775 PF00162 Phosphoglycerate kinase D0853_RS02780 PF01116 Fructose-bisphosphate aldolase class-II D0853_RS02785 PF05552 Conserved TM helix D0853_RS02785 PF00924 Mechanosensitive ion channel D0853_RS02790 PF04073 Aminoacyl-tRNA editing domain D0853_RS02795 PF01810 LysE type translocator D0853_RS02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS02800 PF03466 LysR substrate binding domain D0853_RS02805 PF04402 Protein of unknown function (DUF541) D0853_RS02810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0853_RS02810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0853_RS02810 PF01842 ACT domain D0853_RS02815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D0853_RS02820 PF01812 5-formyltetrahydrofolate cyclo-ligase family D0853_RS02830 PF05164 Cell division protein ZapA D0853_RS02840 PF03695 Uncharacterised protein family (UPF0149) D0853_RS02845 PF01494 FAD binding domain D0853_RS02850 PF01494 FAD binding domain D0853_RS02865 PF01571 Aminomethyltransferase folate-binding domain D0853_RS02870 PF03937 Flavinator of succinate dehydrogenase D0853_RS02880 PF00890 FAD binding domain D0853_RS02880 PF02910 Fumarate reductase flavoprotein C-term D0853_RS02890 PF08281 Sigma-70, region 4 D0853_RS02890 PF04542 Sigma-70 region 2 D0853_RS02895 PF03872 Anti sigma-E protein RseA, N-terminal domain D0853_RS02895 PF03873 Anti sigma-E protein RseA, C-terminal domain D0853_RS02900 PF03888 MucB/RseB N-terminal domain D0853_RS02900 PF17188 MucB/RseB C-terminal domain D0853_RS02910 PF03144 Elongation factor Tu domain 2 D0853_RS02910 PF00679 Elongation factor G C-terminus D0853_RS02910 PF06421 GTP-binding protein LepA C-terminus D0853_RS02910 PF00009 Elongation factor Tu GTP binding domain D0853_RS02915 PF10502 Signal peptidase, peptidase S26 D0853_RS02920 PF14622 Ribonuclease-III-like D0853_RS02920 PF00035 Double-stranded RNA binding motif D0853_RS02925 PF07650 KH domain D0853_RS02925 PF01926 50S ribosome-binding GTPase D0853_RS02930 PF11967 Recombination protein O N terminal D0853_RS02930 PF02565 Recombination protein O C terminal D0853_RS02935 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D0853_RS02940 PF01648 4'-phosphopantetheinyl transferase superfamily D0853_RS02945 PF00672 HAMP domain D0853_RS02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS02945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0853_RS02945 PF01627 Hpt domain D0853_RS02945 PF00072 Response regulator receiver domain D0853_RS02945 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS02955 PF05958 tRNA (Uracil-5-)-methyltransferase D0853_RS02955 PF01938 TRAM domain D0853_RS02965 PF13291 ACT domain D0853_RS02965 PF04607 Region found in RelA / SpoT proteins D0853_RS02965 PF02824 TGS domain D0853_RS02970 PF03819 MazG nucleotide pyrophosphohydrolase domain D0853_RS02975 PF00117 Glutamine amidotransferase class-I D0853_RS02975 PF06418 CTP synthase N-terminus D0853_RS02980 PF00113 Enolase, C-terminal TIM barrel domain D0853_RS02980 PF03952 Enolase, N-terminal domain D0853_RS02985 PF04977 Septum formation initiator D0853_RS02990 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0853_RS02995 PF02542 YgbB family D0853_RS03000 PF01142 tRNA pseudouridine synthase D (TruD) D0853_RS03005 PF01975 Survival protein SurE D0853_RS03015 PF01551 Peptidase family M23 D0853_RS03015 PF01476 LysM domain D0853_RS03025 PF00488 MutS domain V D0853_RS03025 PF05190 MutS family domain IV D0853_RS03025 PF05192 MutS domain III D0853_RS03025 PF05188 MutS domain II D0853_RS03025 PF01624 MutS domain I D0853_RS03030 PF02464 Competence-damaged protein D0853_RS03035 PF00154 recA bacterial DNA recombination protein D0853_RS03040 PF02631 RecX family D0853_RS03045 PF01411 tRNA synthetases class II (A) D0853_RS03045 PF02272 DHHA1 domain D0853_RS03045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0853_RS03050 PF13840 ACT domain D0853_RS03050 PF00696 Amino acid kinase family D0853_RS03050 PF01842 ACT domain D0853_RS03055 PF02599 Global regulator protein family D0853_RS03110 PF04277 Oxaloacetate decarboxylase, gamma chain D0853_RS03115 PF00682 HMGL-like D0853_RS03115 PF02436 Conserved carboxylase domain D0853_RS03115 PF00364 Biotin-requiring enzyme D0853_RS03120 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D0853_RS03125 PF00107 Zinc-binding dehydrogenase D0853_RS03125 PF08240 Alcohol dehydrogenase GroES-like domain D0853_RS03130 PF09335 SNARE associated Golgi protein D0853_RS03135 PF00675 Insulinase (Peptidase family M16) D0853_RS03135 PF05193 Peptidase M16 inactive domain D0853_RS03140 PF04262 Glutamate-cysteine ligase D0853_RS03150 PF02664 S-Ribosylhomocysteinase (LuxS) D0853_RS03155 PF03471 Transporter associated domain D0853_RS03155 PF00571 CBS domain D0853_RS03155 PF01595 Cyclin M transmembrane N-terminal domain D0853_RS03160 PF01578 Cytochrome C assembly protein D0853_RS03165 PF02978 Signal peptide binding domain D0853_RS03165 PF02881 SRP54-type protein, helical bundle domain D0853_RS03165 PF00448 SRP54-type protein, GTPase domain D0853_RS03170 PF00886 Ribosomal protein S16 D0853_RS03175 PF01782 RimM N-terminal domain D0853_RS03175 PF05239 PRC-barrel domain D0853_RS03180 PF01746 tRNA (Guanine-1)-methyltransferase D0853_RS03185 PF01245 Ribosomal protein L19 D0853_RS03190 PF03884 DNA gyrase inhibitor YacG D0853_RS03195 PF07072 Cell division protein D0853_RS03200 PF01121 Dephospho-CoA kinase D0853_RS03205 PF06750 Bacterial Peptidase A24 N-terminal domain D0853_RS03205 PF01478 Type IV leader peptidase family D0853_RS03210 PF00482 Type II secretion system (T2SS), protein F D0853_RS03215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D0853_RS03215 PF00437 Type II/IV secretion system protein D0853_RS03220 PF00114 Pilin (bacterial filament) D0853_RS03220 PF07963 Prokaryotic N-terminal methylation motif D0853_RS03225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D0853_RS03225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D0853_RS03230 PF01510 N-acetylmuramoyl-L-alanine amidase D0853_RS03235 PF00392 Bacterial regulatory proteins, gntR family D0853_RS03235 PF07729 FCD domain D0853_RS03240 PF17831 Pyruvate dehydrogenase E1 component middle domain D0853_RS03240 PF00456 Transketolase, thiamine diphosphate binding domain D0853_RS03245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0853_RS03245 PF00364 Biotin-requiring enzyme D0853_RS03245 PF02817 e3 binding domain D0853_RS03250 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS03250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0853_RS03255 PF00440 Bacterial regulatory proteins, tetR family D0853_RS03260 PF00156 Phosphoribosyl transferase domain D0853_RS03265 PF00484 Carbonic anhydrase D0853_RS03270 PF01740 STAS domain D0853_RS03270 PF00916 Sulfate permease family D0853_RS03280 PF00005 ABC transporter D0853_RS03285 PF01061 ABC-2 type transporter D0853_RS03295 PF03279 Bacterial lipid A biosynthesis acyltransferase D0853_RS03305 PF02569 Pantoate-beta-alanine ligase D0853_RS03310 PF02548 Ketopantoate hydroxymethyltransferase D0853_RS03315 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0853_RS03320 PF01743 Poly A polymerase head domain D0853_RS03320 PF12626 Polymerase A arginine-rich C-terminus D0853_RS03320 PF12627 Probable RNA and SrmB- binding site of polymerase A D0853_RS03330 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0853_RS03340 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0853_RS03345 PF03749 Sugar fermentation stimulation protein RE domain D0853_RS03345 PF17746 SfsA N-terminal OB domain D0853_RS03350 PF08482 ATP-dependent helicase C-terminal D0853_RS03350 PF00271 Helicase conserved C-terminal domain D0853_RS03350 PF00270 DEAD/DEAH box helicase D0853_RS03350 PF04408 Helicase associated domain (HA2) D0853_RS03355 PF00912 Transglycosylase D0853_RS03355 PF00905 Penicillin binding protein transpeptidase domain D0853_RS03355 PF14814 Bifunctional transglycosylase second domain D0853_RS03360 PF01734 Patatin-like phospholipase D0853_RS03365 PF11791 Aconitate B N-terminal domain D0853_RS03365 PF00330 Aconitase family (aconitate hydratase) D0853_RS03365 PF06434 Aconitate hydratase 2 N-terminus D0853_RS03370 PF06062 Uncharacterised protein family (UPF0231) D0853_RS03375 PF00543 Nitrogen regulatory protein P-II D0853_RS03380 PF00909 Ammonium Transporter Family D0853_RS03385 PF13416 Bacterial extracellular solute-binding protein D0853_RS03395 PF00005 ABC transporter D0853_RS03395 PF08402 TOBE domain D0853_RS03400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0853_RS03400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0853_RS03400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0853_RS03400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0853_RS03405 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D0853_RS03405 PF06165 Glycosyltransferase family 36 D0853_RS03410 PF00728 Glycosyl hydrolase family 20, catalytic domain D0853_RS03410 PF02838 Glycosyl hydrolase family 20, domain 2 D0853_RS03415 PF01869 BadF/BadG/BcrA/BcrD ATPase family D0853_RS03425 PF00005 ABC transporter D0853_RS03425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS03430 PF00005 ABC transporter D0853_RS03430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS03435 PF12911 N-terminal TM domain of oligopeptide transport permease C D0853_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS03445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS03450 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS03450 PF00072 Response regulator receiver domain D0853_RS03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS03450 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS03460 PF08468 Methyltransferase small domain N-terminal D0853_RS03460 PF05175 Methyltransferase small domain D0853_RS03465 PF01594 AI-2E family transporter D0853_RS03470 PF00202 Aminotransferase class-III D0853_RS03475 PF01521 Iron-sulphur cluster biosynthesis D0853_RS03485 PF00873 AcrB/AcrD/AcrF family D0853_RS03490 PF08525 Opacity-associated protein A N-terminal motif D0853_RS03490 PF01476 LysM domain D0853_RS03490 PF01551 Peptidase family M23 D0853_RS03495 PF00579 tRNA synthetases class I (W and Y) D0853_RS03505 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D0853_RS03510 PF13609 Gram-negative porin D0853_RS03515 PF03449 Transcription elongation factor, N-terminal D0853_RS03515 PF01272 Transcription elongation factor, GreA/GreB, C-term D0853_RS03520 PF01985 CRS1 / YhbY (CRM) domain D0853_RS03525 PF01728 FtsJ-like methyltransferase D0853_RS03530 PF06480 FtsH Extracellular D0853_RS03530 PF17862 AAA+ lid domain D0853_RS03530 PF01434 Peptidase family M41 D0853_RS03530 PF00004 ATPase family associated with various cellular activities (AAA) D0853_RS03535 PF00809 Pterin binding enzyme D0853_RS03540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0853_RS03540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0853_RS03540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0853_RS03540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0853_RS03550 PF03840 Preprotein translocase SecG subunit D0853_RS03565 PF02576 RimP N-terminal domain D0853_RS03565 PF17384 RimP C-terminal SH3 domain D0853_RS03570 PF00575 S1 RNA binding domain D0853_RS03570 PF13184 NusA-like KH domain D0853_RS03570 PF08529 NusA N-terminal domain D0853_RS03575 PF11987 Translation-initiation factor 2 D0853_RS03575 PF04760 Translation initiation factor IF-2, N-terminal region D0853_RS03575 PF08364 Bacterial translation initiation factor IF-2 associated region D0853_RS03575 PF00009 Elongation factor Tu GTP binding domain D0853_RS03580 PF02033 Ribosome-binding factor A D0853_RS03585 PF09157 Pseudouridine synthase II TruB, C-terminal D0853_RS03585 PF16198 tRNA pseudouridylate synthase B C-terminal domain D0853_RS03585 PF01509 TruB family pseudouridylate synthase (N terminal domain) D0853_RS03590 PF00312 Ribosomal protein S15 D0853_RS03595 PF03725 3' exoribonuclease family, domain 2 D0853_RS03595 PF01138 3' exoribonuclease family, domain 1 D0853_RS03595 PF00013 KH domain D0853_RS03595 PF00575 S1 RNA binding domain D0853_RS03595 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D0853_RS03600 PF13181 Tetratricopeptide repeat D0853_RS03600 PF07719 Tetratricopeptide repeat D0853_RS03610 PF01554 MatE D0853_RS03615 PF01136 Peptidase family U32 D0853_RS03620 PF01136 Peptidase family U32 D0853_RS03625 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS03625 PF03707 Bacterial signalling protein N terminal repeat D0853_RS03625 PF00563 EAL domain D0853_RS03630 PF02036 SCP-2 sterol transfer family D0853_RS03635 PF13508 Acetyltransferase (GNAT) domain D0853_RS03655 PF03144 Elongation factor Tu domain 2 D0853_RS03655 PF16658 Class II release factor RF3, C-terminal domain D0853_RS03655 PF00009 Elongation factor Tu GTP binding domain D0853_RS03665 PF01026 TatD related DNase D0853_RS03670 PF07670 Nucleoside recognition D0853_RS03670 PF07662 Na+ dependent nucleoside transporter C-terminus D0853_RS03670 PF01773 Na+ dependent nucleoside transporter N-terminus D0853_RS03675 PF01791 DeoC/LacD family aldolase D0853_RS03680 PF02885 Glycosyl transferase family, helical bundle domain D0853_RS03680 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D0853_RS03680 PF00591 Glycosyl transferase family, a/b domain D0853_RS03685 PF01676 Metalloenzyme superfamily D0853_RS03690 PF01048 Phosphorylase superfamily D0853_RS03700 PF18429 Domain of unknown function (DUF5609) D0853_RS03710 PF18073 Rubredoxin metal binding domain D0853_RS03715 PF00679 Elongation factor G C-terminus D0853_RS03715 PF00009 Elongation factor Tu GTP binding domain D0853_RS03715 PF03764 Elongation factor G, domain IV D0853_RS03715 PF03144 Elongation factor Tu domain 2 D0853_RS03715 PF14492 Elongation Factor G, domain II D0853_RS03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS03720 PF03466 LysR substrate binding domain D0853_RS03730 PF00501 AMP-binding enzyme D0853_RS03735 PF12833 Helix-turn-helix domain D0853_RS03735 PF02805 Metal binding domain of Ada D0853_RS03760 PF13629 Pilus formation protein N terminal region D0853_RS03760 PF00263 Bacterial type II and III secretion system protein D0853_RS03760 PF04972 BON domain D0853_RS03790 PF00437 Type II/IV secretion system protein D0853_RS03820 PF03466 LysR substrate binding domain D0853_RS03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS03825 PF13520 Amino acid permease D0853_RS03830 PF04074 YhcH/YjgK/YiaL D0853_RS03835 PF00703 Glycosyl hydrolases family 2 D0853_RS03835 PF16353 Domain of unknown function(DUF4981) D0853_RS03835 PF02929 Beta galactosidase small chain D0853_RS03835 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0853_RS03835 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0853_RS03840 PF00356 Bacterial regulatory proteins, lacI family D0853_RS03850 PF16363 GDP-mannose 4,6 dehydratase D0853_RS03855 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D0853_RS03855 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D0853_RS03860 PF00288 GHMP kinases N terminal domain D0853_RS03860 PF08544 GHMP kinases C terminal D0853_RS03860 PF10509 Galactokinase galactose-binding signature D0853_RS03865 PF01263 Aldose 1-epimerase D0853_RS03870 PF00356 Bacterial regulatory proteins, lacI family D0853_RS03885 PF00356 Bacterial regulatory proteins, lacI family D0853_RS03890 PF01588 Putative tRNA binding domain D0853_RS03905 PF01544 CorA-like Mg2+ transporter protein D0853_RS03910 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D0853_RS03910 PF01266 FAD dependent oxidoreductase D0853_RS03915 PF00455 DeoR C terminal sensor domain D0853_RS03915 PF08220 DeoR-like helix-turn-helix domain D0853_RS03920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0853_RS03920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0853_RS03925 PF00230 Major intrinsic protein D0853_RS03940 PF07690 Major Facilitator Superfamily D0853_RS03945 PF03009 Glycerophosphoryl diester phosphodiesterase family D0853_RS03950 PF14602 Hexapeptide repeat of succinyl-transferase D0853_RS03950 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle D0853_RS03955 PF07130 YebG protein D0853_RS03960 PF03466 LysR substrate binding domain D0853_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS03970 PF00884 Sulfatase D0853_RS03970 PF11893 Domain of unknown function (DUF3413) D0853_RS03975 PF17946 RecC C-terminal domain D0853_RS03985 PF12705 PD-(D/E)XK nuclease superfamily D0853_RS03985 PF13361 UvrD-like helicase C-terminal domain D0853_RS03985 PF00580 UvrD/REP helicase N-terminal domain D0853_RS03990 PF13538 UvrD-like helicase C-terminal domain D0853_RS04000 PF00583 Acetyltransferase (GNAT) family D0853_RS04000 PF00696 Amino acid kinase family D0853_RS04015 PF06725 3D domain D0853_RS04015 PF03562 MltA specific insert domain D0853_RS04020 PF00899 ThiF family D0853_RS04025 PF02657 Fe-S metabolism associated domain D0853_RS04030 PF17158 Membrane-associated sensor, integral membrane domain D0853_RS04030 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS04035 PF00266 Aminotransferase class-V D0853_RS04040 PF01965 DJ-1/PfpI family D0853_RS04045 PF02558 Ketopantoate reductase PanE/ApbA D0853_RS04045 PF08546 Ketopantoate reductase PanE/ApbA C terminal D0853_RS04050 PF03502 Nucleoside-specific channel-forming protein, Tsx D0853_RS04075 PF04542 Sigma-70 region 2 D0853_RS04075 PF04545 Sigma-70, region 4 D0853_RS04085 PF07690 Major Facilitator Superfamily D0853_RS04090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0853_RS04095 PF03923 Uncharacterized lipoprotein D0853_RS04095 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D0853_RS04100 PF05175 Methyltransferase small domain D0853_RS04105 PF01722 BolA-like protein D0853_RS04110 PF11973 NQRA C-terminal domain D0853_RS04110 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D0853_RS04115 PF03116 NQR2, RnfD, RnfE family D0853_RS04120 PF04205 FMN-binding domain D0853_RS04125 PF02508 Rnf-Nqr subunit, membrane protein D0853_RS04130 PF02508 Rnf-Nqr subunit, membrane protein D0853_RS04135 PF00970 Oxidoreductase FAD-binding domain D0853_RS04135 PF00175 Oxidoreductase NAD-binding domain D0853_RS04135 PF00111 2Fe-2S iron-sulfur cluster binding domain D0853_RS04140 PF02424 ApbE family D0853_RS04155 PF11799 impB/mucB/samB family C-terminal domain D0853_RS04155 PF11798 IMS family HHH motif D0853_RS04155 PF00817 impB/mucB/samB family D0853_RS04160 PF00270 DEAD/DEAH box helicase D0853_RS04160 PF00570 HRDC domain D0853_RS04160 PF16124 RecQ zinc-binding D0853_RS04160 PF09382 RQC domain D0853_RS04160 PF00271 Helicase conserved C-terminal domain D0853_RS04165 PF03449 Transcription elongation factor, N-terminal D0853_RS04165 PF01272 Transcription elongation factor, GreA/GreB, C-term D0853_RS04180 PF00209 Sodium:neurotransmitter symporter family D0853_RS04190 PF06786 Uncharacterised protein family (UPF0253) D0853_RS04200 PF04073 Aminoacyl-tRNA editing domain D0853_RS04200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0853_RS04200 PF03129 Anticodon binding domain D0853_RS04205 PF18389 TrmO C-terminal domain D0853_RS04205 PF01980 tRNA-methyltransferase O D0853_RS04210 PF01197 Ribosomal protein L31 D0853_RS04215 PF00444 Ribosomal protein L36 D0853_RS04225 PF03806 AbgT putative transporter family D0853_RS04230 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D0853_RS04255 PF04287 tRNA pseudouridine synthase C D0853_RS04260 PF00849 RNA pseudouridylate synthase D0853_RS04265 PF11944 Protein of unknown function (DUF3461) D0853_RS04270 PF08335 GlnD PII-uridylyltransferase D0853_RS04270 PF01842 ACT domain D0853_RS04270 PF01909 Nucleotidyltransferase domain D0853_RS04270 PF01966 HD domain D0853_RS04275 PF00557 Metallopeptidase family M24 D0853_RS04280 PF00318 Ribosomal protein S2 D0853_RS04285 PF00889 Elongation factor TS D0853_RS04290 PF00696 Amino acid kinase family D0853_RS04295 PF01765 Ribosome recycling factor D0853_RS04300 PF01255 Putative undecaprenyl diphosphate synthase D0853_RS04310 PF13288 DXP reductoisomerase C-terminal domain D0853_RS04310 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D0853_RS04310 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D0853_RS04315 PF17820 PDZ domain D0853_RS04315 PF02163 Peptidase family M50 D0853_RS04320 PF07244 Surface antigen variable number repeat D0853_RS04320 PF01103 Surface antigen D0853_RS04325 PF03938 Outer membrane protein (OmpH-like) D0853_RS04330 PF00132 Bacterial transferase hexapeptide (six repeats) D0853_RS04330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D0853_RS04335 PF07977 FabA-like domain D0853_RS04340 PF00132 Bacterial transferase hexapeptide (six repeats) D0853_RS04340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D0853_RS04345 PF02684 Lipid-A-disaccharide synthetase D0853_RS04350 PF01351 Ribonuclease HII D0853_RS04355 PF01336 OB-fold nucleic acid binding domain D0853_RS04355 PF02811 PHP domain D0853_RS04355 PF14579 Helix-hairpin-helix motif D0853_RS04355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0853_RS04355 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0853_RS04360 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D0853_RS04365 PF11734 TilS substrate C-terminal domain D0853_RS04365 PF09179 TilS substrate binding domain D0853_RS04365 PF01171 PP-loop family D0853_RS04370 PF00034 Cytochrome c D0853_RS04375 PF00543 Nitrogen regulatory protein P-II D0853_RS04380 PF03372 Endonuclease/Exonuclease/phosphatase family D0853_RS04390 PF01464 Transglycosylase SLT domain D0853_RS04390 PF01476 LysM domain D0853_RS04395 PF00753 Metallo-beta-lactamase superfamily D0853_RS04395 PF16123 Hydroxyacylglutathione hydrolase C-terminus D0853_RS04400 PF08241 Methyltransferase domain D0853_RS04405 PF00075 RNase H D0853_RS04410 PF00929 Exonuclease D0853_RS04420 PF01740 STAS domain D0853_RS04420 PF00916 Sulfate permease family D0853_RS04425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0853_RS04425 PF02770 Acyl-CoA dehydrogenase, middle domain D0853_RS04425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0853_RS04425 PF09317 Domain of unknown function (DUF1974) D0853_RS04430 PF13580 SIS domain D0853_RS04435 PF13230 Glutamine amidotransferases class-II D0853_RS04440 PF00551 Formyl transferase D0853_RS04445 PF02769 AIR synthase related protein, C-terminal domain D0853_RS04445 PF00586 AIR synthase related protein, N-terminal domain D0853_RS04455 PF00860 Permease family D0853_RS04470 PF03358 NADPH-dependent FMN reductase D0853_RS04475 PF03960 ArsC family D0853_RS04480 PF01435 Peptidase family M48 D0853_RS04480 PF13181 Tetratricopeptide repeat D0853_RS04490 PF01594 AI-2E family transporter D0853_RS04495 PF00578 AhpC/TSA family D0853_RS04500 PF01842 ACT domain D0853_RS04505 PF00701 Dihydrodipicolinate synthetase family D0853_RS04510 PF06804 NlpB/DapX lipoprotein D0853_RS04525 PF01546 Peptidase family M20/M25/M40 D0853_RS04525 PF07687 Peptidase dimerisation domain D0853_RS04530 PF03960 ArsC family D0853_RS04555 PF11143 Protein of unknown function (DUF2919) D0853_RS04560 PF04261 Dyp-type peroxidase family D0853_RS04565 PF00669 Bacterial flagellin N-terminal helical region D0853_RS04565 PF07196 Flagellin hook IN motif D0853_RS04565 PF00700 Bacterial flagellin C-terminal helical region D0853_RS04575 PF07196 Flagellin hook IN motif D0853_RS04575 PF00700 Bacterial flagellin C-terminal helical region D0853_RS04575 PF00669 Bacterial flagellin N-terminal helical region D0853_RS04580 PF00669 Bacterial flagellin N-terminal helical region D0853_RS04580 PF07196 Flagellin hook IN motif D0853_RS04580 PF00700 Bacterial flagellin C-terminal helical region D0853_RS04585 PF03646 FlaG protein D0853_RS04590 PF07196 Flagellin hook IN motif D0853_RS04590 PF07195 Flagellar hook-associated protein 2 C-terminus D0853_RS04590 PF02465 Flagellar hook-associated protein 2 N-terminus D0853_RS04600 PF02561 Flagellar protein FliS D0853_RS04605 PF00158 Sigma-54 interaction domain D0853_RS04605 PF02954 Bacterial regulatory protein, Fis family D0853_RS04605 PF06490 Flagellar regulatory protein FleQ D0853_RS04610 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS04610 PF13188 PAS domain D0853_RS04615 PF02954 Bacterial regulatory protein, Fis family D0853_RS04615 PF00072 Response regulator receiver domain D0853_RS04615 PF00158 Sigma-54 interaction domain D0853_RS04620 PF02049 Flagellar hook-basal body complex protein FliE D0853_RS04625 PF08345 Flagellar M-ring protein C-terminal D0853_RS04625 PF01514 Secretory protein of YscJ/FliF family D0853_RS04630 PF14841 FliG middle domain D0853_RS04630 PF14842 FliG N-terminal domain D0853_RS04630 PF01706 FliG C-terminal domain D0853_RS04640 PF18269 T3SS EscN ATPase C-terminal domain D0853_RS04640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0853_RS04660 PF02154 Flagellar motor switch protein FliM D0853_RS04660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0853_RS04665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0853_RS04670 PF04347 Flagellar biosynthesis protein, FliO D0853_RS04675 PF00813 FliP family D0853_RS04680 PF01313 Bacterial export proteins, family 3 D0853_RS04685 PF01311 Bacterial export proteins, family 1 D0853_RS04690 PF01312 FlhB HrpN YscU SpaS Family D0853_RS04695 PF00771 FHIPEP family D0853_RS04700 PF00448 SRP54-type protein, GTPase domain D0853_RS04705 PF10609 NUBPL iron-transfer P-loop NTPase D0853_RS04710 PF04542 Sigma-70 region 2 D0853_RS04710 PF04545 Sigma-70, region 4 D0853_RS04710 PF04539 Sigma-70 region 3 D0853_RS04715 PF00072 Response regulator receiver domain D0853_RS04720 PF04344 Chemotaxis phosphatase, CheZ D0853_RS04725 PF02895 Signal transducing histidine kinase, homodimeric domain D0853_RS04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS04725 PF00072 Response regulator receiver domain D0853_RS04725 PF01627 Hpt domain D0853_RS04725 PF01584 CheW-like domain D0853_RS04730 PF00072 Response regulator receiver domain D0853_RS04730 PF01339 CheB methylesterase D0853_RS04735 PF13614 AAA domain D0853_RS04745 PF01584 CheW-like domain D0853_RS04755 PF00005 ABC transporter D0853_RS04760 PF03379 CcmB protein D0853_RS04765 PF01578 Cytochrome C assembly protein D0853_RS04770 PF04995 Heme exporter protein D (CcmD) D0853_RS04775 PF03100 CcmE D0853_RS04780 PF01578 Cytochrome C assembly protein D0853_RS04780 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0853_RS04785 PF08534 Redoxin D0853_RS04790 PF03918 Cytochrome C biogenesis protein D0853_RS04800 PF04333 MlaA lipoprotein D0853_RS04805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0853_RS04810 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0853_RS04820 PF04542 Sigma-70 region 2 D0853_RS04820 PF08281 Sigma-70, region 4 D0853_RS04830 PF00108 Thiolase, N-terminal domain D0853_RS04830 PF02803 Thiolase, C-terminal domain D0853_RS04835 PF00378 Enoyl-CoA hydratase/isomerase D0853_RS04835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D0853_RS04835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D0853_RS04845 PF00675 Insulinase (Peptidase family M16) D0853_RS04845 PF16187 Middle or third domain of peptidase_M16 D0853_RS04845 PF05193 Peptidase M16 inactive domain D0853_RS04850 PF00300 Histidine phosphatase superfamily (branch 1) D0853_RS04855 PF01713 Smr domain D0853_RS04860 PF05175 Methyltransferase small domain D0853_RS04865 PF01264 Chorismate synthase D0853_RS04870 PF03458 UPF0126 domain D0853_RS04880 PF04315 Elongation factor P hydroxylase D0853_RS04885 PF08891 YfcL protein D0853_RS04895 PF03358 NADPH-dependent FMN reductase D0853_RS04900 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D0853_RS04900 PF01266 FAD dependent oxidoreductase D0853_RS04905 PF02801 Beta-ketoacyl synthase, C-terminal domain D0853_RS04905 PF00109 Beta-ketoacyl synthase, N-terminal domain D0853_RS04915 PF11890 Domain of unknown function (DUF3410) D0853_RS04915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0853_RS04915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0853_RS04920 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0853_RS04920 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0853_RS04930 PF01416 tRNA pseudouridine synthase D0853_RS04935 PF01039 Carboxyl transferase domain D0853_RS04935 PF17848 Acetyl-coA carboxylase zinc finger domain D0853_RS04940 PF02875 Mur ligase family, glutamate ligase domain D0853_RS04940 PF08245 Mur ligase middle domain D0853_RS04945 PF05036 Sporulation related domain D0853_RS04950 PF02674 Colicin V production protein D0853_RS04955 PF00156 Phosphoribosyl transferase domain D0853_RS04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS04960 PF03466 LysR substrate binding domain D0853_RS04965 PF00072 Response regulator receiver domain D0853_RS04975 PF04304 Protein of unknown function (DUF454) D0853_RS04980 PF00156 Phosphoribosyl transferase domain D0853_RS04985 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D0853_RS04985 PF12169 DNA polymerase III subunits gamma and tau domain III D0853_RS04985 PF12170 DNA polymerase III tau subunit V interacting with alpha D0853_RS04990 PF02575 YbaB/EbfC DNA-binding family D0853_RS04995 PF13662 Toprim domain D0853_RS04995 PF02132 RecR protein D0853_RS05000 PF00230 Major intrinsic protein D0853_RS05010 PF01042 Endoribonuclease L-PSP D0853_RS05015 PF03313 Serine dehydratase alpha chain D0853_RS05025 PF03692 Putative zinc- or iron-chelating domain D0853_RS05030 PF04226 Transglycosylase associated protein D0853_RS05035 PF03692 Putative zinc- or iron-chelating domain D0853_RS05040 PF00924 Mechanosensitive ion channel D0853_RS05040 PF05552 Conserved TM helix D0853_RS05045 PF03992 Antibiotic biosynthesis monooxygenase D0853_RS05050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0853_RS05060 PF00245 Alkaline phosphatase D0853_RS05080 PF13847 Methyltransferase domain D0853_RS05085 PF02743 Cache domain D0853_RS05085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS05085 PF00672 HAMP domain D0853_RS05090 PF01263 Aldose 1-epimerase D0853_RS05095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0853_RS05095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0853_RS05100 PF01641 SelR domain D0853_RS05110 PF07023 Protein of unknown function (DUF1315) D0853_RS05115 PF17763 Glutaminase/Asparaginase C-terminal domain D0853_RS05115 PF00710 Asparaginase, N-terminal D0853_RS05120 PF01343 Peptidase family S49 D0853_RS05125 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS05125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0853_RS05130 PF00881 Nitroreductase family D0853_RS05135 PF01751 Toprim domain D0853_RS05135 PF01131 DNA topoisomerase D0853_RS05150 PF00106 short chain dehydrogenase D0853_RS05155 PF00850 Histone deacetylase domain D0853_RS05225 PF14659 Phage integrase, N-terminal SAM-like domain D0853_RS05225 PF00589 Phage integrase family D0853_RS05235 PF11893 Domain of unknown function (DUF3413) D0853_RS05235 PF00884 Sulfatase D0853_RS05240 PF07208 Protein of unknown function (DUF1414) D0853_RS05245 PF04245 37-kD nucleoid-associated bacterial protein D0853_RS05260 PF03553 Na+/H+ antiporter family D0853_RS05265 PF02774 Semialdehyde dehydrogenase, dimerisation domain D0853_RS05265 PF01118 Semialdehyde dehydrogenase, NAD binding domain D0853_RS05270 PF00520 Ion transport protein D0853_RS05270 PF00027 Cyclic nucleotide-binding domain D0853_RS05275 PF01914 MarC family integral membrane protein D0853_RS05280 PF00465 Iron-containing alcohol dehydrogenase D0853_RS05280 PF00171 Aldehyde dehydrogenase family D0853_RS05295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D0853_RS05295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D0853_RS05300 PF00462 Glutaredoxin D0853_RS05310 PF13726 Na+-H+ antiporter family D0853_RS05310 PF03553 Na+/H+ antiporter family D0853_RS05315 PF00929 Exonuclease D0853_RS05330 PF18393 MotY N-terminal domain D0853_RS05330 PF00691 OmpA family D0853_RS05335 PF10952 Protein of unknown function (DUF2753) D0853_RS05340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0853_RS05345 PF10576 Iron-sulfur binding domain of endonuclease III D0853_RS05345 PF00730 HhH-GPD superfamily base excision DNA repair protein D0853_RS05345 PF00633 Helix-hairpin-helix motif D0853_RS05350 PF02508 Rnf-Nqr subunit, membrane protein D0853_RS05355 PF04205 FMN-binding domain D0853_RS05360 PF03116 NQR2, RnfD, RnfE family D0853_RS05365 PF10531 SLBB domain D0853_RS05365 PF13375 RnfC Barrel sandwich hybrid domain D0853_RS05365 PF12838 4Fe-4S dicluster domain D0853_RS05365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D0853_RS05370 PF04060 Putative Fe-S cluster D0853_RS05375 PF02508 Rnf-Nqr subunit, membrane protein D0853_RS05390 PF04851 Type III restriction enzyme, res subunit D0853_RS05390 PF02151 UvrB/uvrC motif D0853_RS05390 PF12344 Ultra-violet resistance protein B D0853_RS05390 PF00271 Helicase conserved C-terminal domain D0853_RS05390 PF17757 UvrB interaction domain D0853_RS05395 PF00158 Sigma-54 interaction domain D0853_RS05395 PF00072 Response regulator receiver domain D0853_RS05395 PF02954 Bacterial regulatory protein, Fis family D0853_RS05400 PF01627 Hpt domain D0853_RS05405 PF01933 Uncharacterised protein family UPF0052 D0853_RS05410 PF04055 Radical SAM superfamily D0853_RS05410 PF06463 Molybdenum Cofactor Synthesis C D0853_RS05415 PF00994 Probable molybdopterin binding domain D0853_RS05420 PF01967 MoaC family D0853_RS05425 PF02597 ThiS family D0853_RS05430 PF02391 MoaE protein D0853_RS05435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS05440 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS05445 PF12911 N-terminal TM domain of oligopeptide transport permease C D0853_RS05445 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS05450 PF00005 ABC transporter D0853_RS05450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS05455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS05455 PF00005 ABC transporter D0853_RS05460 PF13409 Glutathione S-transferase, N-terminal domain D0853_RS05470 PF13194 Domain of unknown function (DUF4010) D0853_RS05475 PF01515 Phosphate acetyl/butaryl transferase D0853_RS05475 PF07085 DRTGG domain D0853_RS05480 PF00871 Acetokinase family D0853_RS05485 PF04217 Protein of unknown function, DUF412 D0853_RS05495 PF02653 Branched-chain amino acid transport system / permease component D0853_RS05500 PF00005 ABC transporter D0853_RS05505 PF02903 Alpha amylase, N-terminal ig-like domain D0853_RS05505 PF00128 Alpha amylase, catalytic domain D0853_RS05510 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS05510 PF00072 Response regulator receiver domain D0853_RS05515 PF01207 Dihydrouridine synthase (Dus) D0853_RS05520 PF01043 SecA preprotein cross-linking domain D0853_RS05520 PF07516 SecA Wing and Scaffold domain D0853_RS05520 PF02810 SEC-C motif D0853_RS05520 PF07517 SecA DEAD-like domain D0853_RS05525 PF02600 Disulfide bond formation protein DsbB D0853_RS05530 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D0853_RS05535 PF00392 Bacterial regulatory proteins, gntR family D0853_RS05535 PF07840 FadR C-terminal domain D0853_RS05545 PF01588 Putative tRNA binding domain D0853_RS05545 PF09334 tRNA synthetases class I (M) D0853_RS05550 PF10609 NUBPL iron-transfer P-loop NTPase D0853_RS05555 PF00485 Phosphoribulokinase / Uridine kinase family D0853_RS05565 PF12557 Cob(I)alamin adenosyltransferase N terminal D0853_RS05565 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D0853_RS05570 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0853_RS05575 PF01740 STAS domain D0853_RS05575 PF00916 Sulfate permease family D0853_RS05585 PF00575 S1 RNA binding domain D0853_RS05585 PF10150 Ribonuclease E/G family D0853_RS05585 PF12111 Polyribonucleotide phosphorylase C terminal D0853_RS05600 PF00849 RNA pseudouridylate synthase D0853_RS05600 PF01479 S4 domain D0853_RS05605 PF02545 Maf-like protein D0853_RS05610 PF02620 Large ribosomal RNA subunit accumulation protein YceD D0853_RS05615 PF01783 Ribosomal L32p protein family D0853_RS05620 PF02504 Fatty acid synthesis protein D0853_RS05625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0853_RS05625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0853_RS05630 PF00698 Acyl transferase domain D0853_RS05640 PF00550 Phosphopantetheine attachment site D0853_RS05645 PF02801 Beta-ketoacyl synthase, C-terminal domain D0853_RS05645 PF00109 Beta-ketoacyl synthase, N-terminal domain D0853_RS05650 PF01063 Amino-transferase class IV D0853_RS05655 PF02618 YceG-like family D0853_RS05660 PF02223 Thymidylate kinase D0853_RS05665 PF09115 DNA polymerase III, delta subunit, C terminal D0853_RS05670 PF01026 TatD related DNase D0853_RS05675 PF00367 phosphotransferase system, EIIB D0853_RS05675 PF02378 Phosphotransferase system, EIIC D0853_RS05695 PF00209 Sodium:neurotransmitter symporter family D0853_RS05710 PF01734 Patatin-like phospholipase D0853_RS05715 PF00224 Pyruvate kinase, barrel domain D0853_RS05715 PF02887 Pyruvate kinase, alpha/beta domain D0853_RS05720 PF00480 ROK family D0853_RS05725 PF01584 CheW-like domain D0853_RS05725 PF00072 Response regulator receiver domain D0853_RS05730 PF14579 Helix-hairpin-helix motif D0853_RS05730 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0853_RS05730 PF01336 OB-fold nucleic acid binding domain D0853_RS05730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0853_RS05730 PF02811 PHP domain D0853_RS05745 PF00106 short chain dehydrogenase D0853_RS05750 PF08496 Peptidase family S49 N-terminal D0853_RS05750 PF01343 Peptidase family S49 D0853_RS05755 PF02224 Cytidylate kinase D0853_RS05760 PF00575 S1 RNA binding domain D0853_RS05765 PF00216 Bacterial DNA-binding protein D0853_RS05770 PF06305 Lipopolysaccharide assembly protein A domain D0853_RS05775 PF18073 Rubredoxin metal binding domain D0853_RS05780 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D0853_RS05785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS05795 PF01370 NAD dependent epimerase/dehydratase family D0853_RS05800 PF00535 Glycosyl transferase family 2 D0853_RS05810 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D0853_RS05820 PF02470 MlaD protein D0853_RS05825 PF04403 Paraquat-inducible protein A D0853_RS05830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0853_RS05835 PF00034 Cytochrome c D0853_RS05840 PF01568 Molydopterin dinucleotide binding domain D0853_RS05840 PF00384 Molybdopterin oxidoreductase D0853_RS05840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0853_RS05845 PF03916 Polysulphide reductase, NrfD D0853_RS05850 PF13247 4Fe-4S dicluster domain D0853_RS05855 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS05860 PF00196 Bacterial regulatory proteins, luxR family D0853_RS05860 PF00072 Response regulator receiver domain D0853_RS05865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS05865 PF03466 LysR substrate binding domain D0853_RS05875 PF11412 Disulphide bond corrector protein DsbC D0853_RS05875 PF02683 Cytochrome C biogenesis protein transmembrane region D0853_RS05880 PF00085 Thioredoxin D0853_RS05895 PF01938 TRAM domain D0853_RS05895 PF05958 tRNA (Uracil-5-)-methyltransferase D0853_RS05910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS05920 PF00005 ABC transporter D0853_RS05920 PF02687 FtsX-like permease family D0853_RS05920 PF12704 MacB-like periplasmic core domain D0853_RS05925 PF02687 FtsX-like permease family D0853_RS05925 PF12704 MacB-like periplasmic core domain D0853_RS05925 PF00005 ABC transporter D0853_RS05930 PF12704 MacB-like periplasmic core domain D0853_RS05930 PF00005 ABC transporter D0853_RS05930 PF02687 FtsX-like permease family D0853_RS05935 PF00857 Isochorismatase family D0853_RS05940 PF12833 Helix-turn-helix domain D0853_RS05940 PF02311 AraC-like ligand binding domain D0853_RS05950 PF08267 Cobalamin-independent synthase, N-terminal domain D0853_RS05950 PF01717 Cobalamin-independent synthase, Catalytic domain D0853_RS05960 PF00529 HlyD membrane-fusion protein of T1SS D0853_RS05960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS05965 PF03466 LysR substrate binding domain D0853_RS05965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS05985 PF00672 HAMP domain D0853_RS05985 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS05990 PF00072 Response regulator receiver domain D0853_RS05990 PF00486 Transcriptional regulatory protein, C terminal D0853_RS06000 PF00672 HAMP domain D0853_RS06000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS06005 PF11842 Domain of unknown function (DUF3362) D0853_RS06005 PF04055 Radical SAM superfamily D0853_RS06005 PF08497 Radical SAM N-terminal D0853_RS06010 PF00563 EAL domain D0853_RS06010 PF00360 Phytochrome region D0853_RS06010 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS06010 PF01590 GAF domain D0853_RS06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS06025 PF03466 LysR substrate binding domain D0853_RS06035 PF08267 Cobalamin-independent synthase, N-terminal domain D0853_RS06035 PF01717 Cobalamin-independent synthase, Catalytic domain D0853_RS06045 PF03795 YCII-related domain D0853_RS06050 PF03061 Thioesterase superfamily D0853_RS06055 PF04279 Intracellular septation protein A D0853_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS06065 PF00072 Response regulator receiver domain D0853_RS06070 PF17327 Acyl homoserine lactone synthase D0853_RS06075 PF00375 Sodium:dicarboxylate symporter family D0853_RS06085 PF13193 AMP-binding enzyme C-terminal domain D0853_RS06085 PF00501 AMP-binding enzyme D0853_RS06090 PF13545 Crp-like helix-turn-helix domain D0853_RS06090 PF00027 Cyclic nucleotide-binding domain D0853_RS06100 PF00290 Tryptophan synthase alpha chain D0853_RS06105 PF00291 Pyridoxal-phosphate dependent enzyme D0853_RS06110 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D0853_RS06110 PF00218 Indole-3-glycerol phosphate synthase D0853_RS06115 PF00591 Glycosyl transferase family, a/b domain D0853_RS06115 PF02885 Glycosyl transferase family, helical bundle domain D0853_RS06120 PF00117 Glutamine amidotransferase class-I D0853_RS06125 PF00425 chorismate binding enzyme D0853_RS06125 PF04715 Anthranilate synthase component I, N terminal region D0853_RS06130 PF08056 Tryptophan operon leader peptide D0853_RS06135 PF02811 PHP domain D0853_RS06140 PF01300 Telomere recombination D0853_RS06150 PF01479 S4 domain D0853_RS06150 PF00849 RNA pseudouridylate synthase D0853_RS06160 PF04269 Protein of unknown function, DUF440 D0853_RS06165 PF08207 Elongation factor P (EF-P) KOW-like domain D0853_RS06165 PF01132 Elongation factor P (EF-P) OB domain D0853_RS06165 PF09285 Elongation factor P, C-terminal D0853_RS06175 PF03104 DNA polymerase family B, exonuclease domain D0853_RS06175 PF00136 DNA polymerase family B D0853_RS06180 PF00196 Bacterial regulatory proteins, luxR family D0853_RS06180 PF00072 Response regulator receiver domain D0853_RS06185 PF02151 UvrB/uvrC motif D0853_RS06185 PF08459 UvrC Helix-hairpin-helix N-terminal D0853_RS06185 PF01541 GIY-YIG catalytic domain D0853_RS06190 PF01066 CDP-alcohol phosphatidyltransferase D0853_RS06215 PF00202 Aminotransferase class-III D0853_RS06220 PF16653 Saccharopine dehydrogenase C-terminal domain D0853_RS06220 PF03435 Saccharopine dehydrogenase NADP binding domain D0853_RS06225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0853_RS06240 PF00994 Probable molybdopterin binding domain D0853_RS06250 PF00268 Ribonucleotide reductase, small chain D0853_RS06255 PF00317 Ribonucleotide reductase, all-alpha domain D0853_RS06255 PF02867 Ribonucleotide reductase, barrel domain D0853_RS06255 PF03477 ATP cone domain D0853_RS06265 PF00521 DNA gyrase/topoisomerase IV, subunit A D0853_RS06265 PF03989 DNA gyrase C-terminal domain, beta-propeller D0853_RS06280 PF02335 Cytochrome c552 D0853_RS06290 PF13247 4Fe-4S dicluster domain D0853_RS06295 PF03916 Polysulphide reductase, NrfD D0853_RS06300 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D0853_RS06300 PF01578 Cytochrome C assembly protein D0853_RS06305 PF08534 Redoxin D0853_RS06310 PF03918 Cytochrome C biogenesis protein D0853_RS06320 PF00925 GTP cyclohydrolase II D0853_RS06345 PF01471 Putative peptidoglycan binding domain D0853_RS06345 PF03734 L,D-transpeptidase catalytic domain D0853_RS06350 PF05951 Bacterial protein of unknown function (DUF882) D0853_RS06355 PF00753 Metallo-beta-lactamase superfamily D0853_RS06370 PF03480 Bacterial extracellular solute-binding protein, family 7 D0853_RS06380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0853_RS06385 PF17200 Single Cache domain 2 D0853_RS06385 PF07730 Histidine kinase D0853_RS06390 PF00196 Bacterial regulatory proteins, luxR family D0853_RS06390 PF00072 Response regulator receiver domain D0853_RS06395 PF01047 MarR family D0853_RS06400 PF02028 BCCT, betaine/carnitine/choline family transporter D0853_RS06405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS06405 PF00672 HAMP domain D0853_RS06425 PF00155 Aminotransferase class I and II D0853_RS06450 PF00392 Bacterial regulatory proteins, gntR family D0853_RS06450 PF00155 Aminotransferase class I and II D0853_RS06460 PF01336 OB-fold nucleic acid binding domain D0853_RS06460 PF00152 tRNA synthetases class II (D, K and N) D0853_RS06465 PF12729 Four helix bundle sensory module for signal transduction D0853_RS06465 PF00672 HAMP domain D0853_RS06465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS06475 PF00575 S1 RNA binding domain D0853_RS06475 PF00773 RNB domain D0853_RS06475 PF08206 Ribonuclease B OB domain D0853_RS06475 PF17876 Cold shock domain D0853_RS06475 PF08461 Ribonuclease R winged-helix domain D0853_RS06480 PF00313 'Cold-shock' DNA-binding domain D0853_RS06510 PF01242 6-pyruvoyl tetrahydropterin synthase D0853_RS06520 PF04940 Sensors of blue-light using FAD D0853_RS06520 PF00563 EAL domain D0853_RS06525 PF03313 Serine dehydratase alpha chain D0853_RS06525 PF03315 Serine dehydratase beta chain D0853_RS06530 PF03222 Tryptophan/tyrosine permease family D0853_RS06535 PF00293 NUDIX domain D0853_RS06545 PF00072 Response regulator receiver domain D0853_RS06545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS06545 PF09308 LuxQ, periplasmic D0853_RS06545 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS06550 PF04715 Anthranilate synthase component I, N terminal region D0853_RS06550 PF00425 chorismate binding enzyme D0853_RS06570 PF04317 YcjX-like family, DUF463 D0853_RS06575 PF05128 Domain of unknown function (DUF697) D0853_RS06580 PF00158 Sigma-54 interaction domain D0853_RS06580 PF18024 Helix-turn-helix domain D0853_RS06585 PF13302 Acetyltransferase (GNAT) domain D0853_RS06600 PF00589 Phage integrase family D0853_RS06600 PF13495 Phage integrase, N-terminal SAM-like domain D0853_RS06620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0853_RS06885 PF13091 PLD-like domain D0853_RS06925 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D0853_RS06930 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D0853_RS07000 PF13676 TIR domain D0853_RS07040 PF01588 Putative tRNA binding domain D0853_RS07125 PF01042 Endoribonuclease L-PSP D0853_RS07190 PF04371 Porphyromonas-type peptidyl-arginine deiminase D0853_RS07195 PF00171 Aldehyde dehydrogenase family D0853_RS07200 PF00202 Aminotransferase class-III D0853_RS07205 PF02833 DHHA2 domain D0853_RS07205 PF01368 DHH family D0853_RS07215 PF00196 Bacterial regulatory proteins, luxR family D0853_RS07215 PF00563 EAL domain D0853_RS07230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0853_RS07230 PF01411 tRNA synthetases class II (A) D0853_RS07230 PF02272 DHHA1 domain D0853_RS07235 PF12833 Helix-turn-helix domain D0853_RS07245 PF01047 MarR family D0853_RS07250 PF04237 YjbR D0853_RS07260 PF01928 CYTH domain D0853_RS07270 PF00132 Bacterial transferase hexapeptide (six repeats) D0853_RS07270 PF12464 Maltose acetyltransferase D0853_RS07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS07285 PF01627 Hpt domain D0853_RS07285 PF00072 Response regulator receiver domain D0853_RS07285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0853_RS07285 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS07285 PF00672 HAMP domain D0853_RS07290 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS07290 PF00563 EAL domain D0853_RS07290 PF03707 Bacterial signalling protein N terminal repeat D0853_RS07305 PF04204 Homoserine O-succinyltransferase D0853_RS07320 PF13520 Amino acid permease D0853_RS07330 PF03279 Bacterial lipid A biosynthesis acyltransferase D0853_RS07335 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D0853_RS07340 PF01810 LysE type translocator D0853_RS07350 PF01235 Sodium:alanine symporter family D0853_RS07375 PF00884 Sulfatase D0853_RS07380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS07380 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS07380 PF08521 Two-component sensor kinase N-terminal D0853_RS07385 PF00486 Transcriptional regulatory protein, C terminal D0853_RS07385 PF00072 Response regulator receiver domain D0853_RS07405 PF00501 AMP-binding enzyme D0853_RS07415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0853_RS07420 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS07425 PF00571 CBS domain D0853_RS07425 PF00005 ABC transporter D0853_RS07440 PF02028 BCCT, betaine/carnitine/choline family transporter D0853_RS07445 PF00583 Acetyltransferase (GNAT) family D0853_RS07450 PF00202 Aminotransferase class-III D0853_RS07455 PF06339 Ectoine synthase D0853_RS07460 PF00696 Amino acid kinase family D0853_RS07460 PF13840 ACT domain D0853_RS07465 PF03150 Di-haem cytochrome c peroxidase D0853_RS07465 PF00034 Cytochrome c D0853_RS07480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS07495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS07495 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D0853_RS07495 PF17203 Single cache domain 3 D0853_RS07495 PF00989 PAS fold D0853_RS07500 PF00072 Response regulator receiver domain D0853_RS07500 PF12431 Transcriptional regulator D0853_RS07505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D0853_RS07505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D0853_RS07510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0853_RS07515 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D0853_RS07515 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0853_RS07540 PF00158 Sigma-54 interaction domain D0853_RS07540 PF02954 Bacterial regulatory protein, Fis family D0853_RS07540 PF01590 GAF domain D0853_RS07545 PF00171 Aldehyde dehydrogenase family D0853_RS07565 PF12833 Helix-turn-helix domain D0853_RS07580 PF03958 Bacterial type II/III secretion system short domain D0853_RS07580 PF00263 Bacterial type II and III secretion system protein D0853_RS07585 PF16697 Inner membrane component of T3SS, cytoplasmic domain D0853_RS07585 PF16693 Inner membrane component of T3SS, periplasmic domain D0853_RS07595 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF D0853_RS07600 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) D0853_RS07610 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI D0853_RS07615 PF01514 Secretory protein of YscJ/FliF family D0853_RS07625 PF02108 Flagellar assembly protein FliH D0853_RS07635 PF02661 Fic/DOC family D0853_RS07675 PF12146 Serine aminopeptidase, S33 D0853_RS07680 PF12146 Serine aminopeptidase, S33 D0853_RS07685 PF03466 LysR substrate binding domain D0853_RS07685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS07690 PF01312 FlhB HrpN YscU SpaS Family D0853_RS07695 PF01311 Bacterial export proteins, family 1 D0853_RS07700 PF01313 Bacterial export proteins, family 3 D0853_RS07705 PF00813 FliP family D0853_RS07710 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0853_RS07725 PF18269 T3SS EscN ATPase C-terminal domain D0853_RS07725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0853_RS07725 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0853_RS07730 PF07201 HrpJ-like domain D0853_RS07735 PF09059 TyeA D0853_RS07755 PF00771 FHIPEP family D0853_RS07760 PF09621 Type III secretion system regulator (LcrR) D0853_RS07765 PF07216 LcrG protein D0853_RS07770 PF04792 V antigen (LcrV) protein D0853_RS07775 PF07720 Tetratricopeptide repeat D0853_RS07785 PF05844 YopD protein D0853_RS07795 PF01925 Sulfite exporter TauE/SafE D0853_RS07800 PF01970 Tripartite tricarboxylate transporter TctA family D0853_RS07830 PF00285 Citrate synthase, C-terminal domain D0853_RS07835 PF00694 Aconitase C-terminal domain D0853_RS07835 PF00330 Aconitase family (aconitate hydratase) D0853_RS07840 PF04303 PrpF protein D0853_RS07845 PF16177 Acetyl-coenzyme A synthetase N-terminus D0853_RS07845 PF00501 AMP-binding enzyme D0853_RS07845 PF13193 AMP-binding enzyme C-terminal domain D0853_RS07855 PF00089 Trypsin D0853_RS07870 PF04055 Radical SAM superfamily D0853_RS07875 PF06508 Queuosine biosynthesis protein QueC D0853_RS07880 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS07880 PF17158 Membrane-associated sensor, integral membrane domain D0853_RS07890 PF00691 OmpA family D0853_RS07890 PF05736 OprF membrane domain D0853_RS07905 PF00691 OmpA family D0853_RS07905 PF05736 OprF membrane domain D0853_RS07920 PF10672 S-adenosylmethionine-dependent methyltransferase D0853_RS07920 PF17785 PUA-like domain D0853_RS07925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS07925 PF00672 HAMP domain D0853_RS07925 PF02743 Cache domain D0853_RS07930 PF00708 Acylphosphatase D0853_RS07935 PF04358 DsrC like protein D0853_RS07945 PF01027 Inhibitor of apoptosis-promoting Bax1 D0853_RS07950 PF00005 ABC transporter D0853_RS07955 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS07960 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS07965 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS07975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0853_RS07975 PF14824 Sirohaem biosynthesis protein central D0853_RS07975 PF10414 Sirohaem synthase dimerisation region D0853_RS07985 PF04461 Protein of unknown function (DUF520) D0853_RS07990 PF00793 DAHP synthetase I family D0853_RS08010 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D0853_RS08010 PF01189 16S rRNA methyltransferase RsmB/F D0853_RS08010 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D0853_RS08020 PF02470 MlaD protein D0853_RS08025 PF04403 Paraquat-inducible protein A D0853_RS08030 PF00664 ABC transporter transmembrane region D0853_RS08030 PF00005 ABC transporter D0853_RS08035 PF13185 GAF domain D0853_RS08040 PF04352 ProQ/FINO family D0853_RS08040 PF17516 ProQ C-terminal domain D0853_RS08045 PF17804 Tail specific protease N-terminal domain D0853_RS08045 PF03572 Peptidase family S41 D0853_RS08045 PF00595 PDZ domain D0853_RS08045 PF11818 C-terminal domain of tail specific protease (DUF3340) D0853_RS08055 PF11940 Domain of unknown function (DUF3458) Ig-like fold D0853_RS08055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D0853_RS08055 PF01433 Peptidase family M1 domain D0853_RS08065 PF05088 Bacterial NAD-glutamate dehydrogenase D0853_RS08070 PF01180 Dihydroorotate dehydrogenase D0853_RS08075 PF07126 Cell-division protein ZapC D0853_RS08085 PF01170 Putative RNA methylase family UPF0020 D0853_RS08085 PF02926 THUMP domain D0853_RS08085 PF10672 S-adenosylmethionine-dependent methyltransferase D0853_RS08095 PF00005 ABC transporter D0853_RS08095 PF16326 ABC transporter C-terminal domain D0853_RS08095 PF12848 ABC transporter D0853_RS08105 PF04957 Ribosome modulation factor D0853_RS08110 PF07977 FabA-like domain D0853_RS08115 PF05362 Lon protease (S16) C-terminal proteolytic domain D0853_RS08115 PF13654 AAA domain D0853_RS08120 PF17414 MatP C-terminal ribbon-helix-helix domain D0853_RS08120 PF06303 MatP N-terminal domain D0853_RS08155 PF05840 Bacteriophage replication gene A protein (GPA) D0853_RS08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS08330 PF00072 Response regulator receiver domain D0853_RS08330 PF09308 LuxQ, periplasmic D0853_RS08330 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS08345 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0853_RS08360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0853_RS08360 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D0853_RS08370 PF00403 Heavy-metal-associated domain D0853_RS08385 PF00027 Cyclic nucleotide-binding domain D0853_RS08385 PF13545 Crp-like helix-turn-helix domain D0853_RS08390 PF00582 Universal stress protein family D0853_RS08400 PF01171 PP-loop family D0853_RS08420 PF08402 TOBE domain D0853_RS08420 PF00005 ABC transporter D0853_RS08425 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS08430 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS08435 PF13416 Bacterial extracellular solute-binding protein D0853_RS08440 PF13416 Bacterial extracellular solute-binding protein D0853_RS08445 PF02146 Sir2 family D0853_RS08455 PF00909 Ammonium Transporter Family D0853_RS08485 PF05593 RHS Repeat D0853_RS08485 PF03527 RHS protein D0853_RS08500 PF13247 4Fe-4S dicluster domain D0853_RS08505 PF01568 Molydopterin dinucleotide binding domain D0853_RS08505 PF00384 Molybdopterin oxidoreductase D0853_RS08505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0853_RS08515 PF02613 Nitrate reductase delta subunit D0853_RS08540 PF02634 FdhD/NarQ family D0853_RS08545 PF00005 ABC transporter D0853_RS08545 PF12848 ABC transporter D0853_RS08555 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS08560 PF02954 Bacterial regulatory protein, Fis family D0853_RS08560 PF00072 Response regulator receiver domain D0853_RS08560 PF00158 Sigma-54 interaction domain D0853_RS08570 PF12849 PBP superfamily domain D0853_RS08575 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS08580 PF08402 TOBE domain D0853_RS08580 PF00005 ABC transporter D0853_RS08585 PF12804 MobA-like NTP transferase domain D0853_RS08590 PF03453 MoeA N-terminal region (domain I and II) D0853_RS08590 PF03454 MoeA C-terminal region (domain IV) D0853_RS08590 PF00994 Probable molybdopterin binding domain D0853_RS08600 PF00480 ROK family D0853_RS08605 PF03942 DTW domain D0853_RS08640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS08640 PF00672 HAMP domain D0853_RS08640 PF17202 Single cache domain 3 D0853_RS08645 PF00877 NlpC/P60 family D0853_RS08655 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS08655 PF05230 MASE2 domain D0853_RS08660 PF00072 Response regulator receiver domain D0853_RS08660 PF01339 CheB methylesterase D0853_RS08665 PF03881 Fructosamine kinase D0853_RS08675 PF00677 Lumazine binding domain D0853_RS08680 PF01554 MatE D0853_RS08690 PF14743 DNA ligase OB-like domain D0853_RS08690 PF01068 ATP dependent DNA ligase domain D0853_RS08695 PF01740 STAS domain D0853_RS08705 PF10531 SLBB domain D0853_RS08705 PF02563 Polysaccharide biosynthesis/export protein D0853_RS08725 PF00158 Sigma-54 interaction domain D0853_RS08725 PF02954 Bacterial regulatory protein, Fis family D0853_RS08725 PF00072 Response regulator receiver domain D0853_RS08730 PF00534 Glycosyl transferases group 1 D0853_RS08730 PF13439 Glycosyltransferase Family 4 D0853_RS08735 PF00534 Glycosyl transferases group 1 D0853_RS08735 PF13439 Glycosyltransferase Family 4 D0853_RS08770 PF00534 Glycosyl transferases group 1 D0853_RS08770 PF13439 Glycosyltransferase Family 4 D0853_RS08775 PF00535 Glycosyl transferase family 2 D0853_RS08780 PF02397 Bacterial sugar transferase D0853_RS08790 PF02028 BCCT, betaine/carnitine/choline family transporter D0853_RS08805 PF11898 Domain of unknown function (DUF3418) D0853_RS08805 PF04408 Helicase associated domain (HA2) D0853_RS08805 PF00270 DEAD/DEAH box helicase D0853_RS08805 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D0853_RS08805 PF00271 Helicase conserved C-terminal domain D0853_RS08810 PF02525 Flavodoxin-like fold D0853_RS08820 PF02613 Nitrate reductase delta subunit D0853_RS08825 PF04976 DMSO reductase anchor subunit (DmsC) D0853_RS08830 PF12800 4Fe-4S binding domain D0853_RS08830 PF13247 4Fe-4S dicluster domain D0853_RS08835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0853_RS08835 PF00384 Molybdopterin oxidoreductase D0853_RS08835 PF01568 Molydopterin dinucleotide binding domain D0853_RS08865 PF17158 Membrane-associated sensor, integral membrane domain D0853_RS08865 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS08875 PF00012 Hsp70 protein D0853_RS08880 PF00012 Hsp70 protein D0853_RS08910 PF00005 ABC transporter D0853_RS08910 PF00664 ABC transporter transmembrane region D0853_RS08915 PF00005 ABC transporter D0853_RS08915 PF00664 ABC transporter transmembrane region D0853_RS08940 PF03222 Tryptophan/tyrosine permease family D0853_RS08945 PF00465 Iron-containing alcohol dehydrogenase D0853_RS08955 PF01966 HD domain D0853_RS09005 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE D0853_RS09035 PF01037 Lrp/AsnC ligand binding domain D0853_RS09045 PF05947 Type VI secretion system, TssF D0853_RS09055 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D0853_RS09070 PF00069 Protein kinase domain D0853_RS09095 PF04717 Type VI secretion system, phage-baseplate injector D0853_RS09100 PF05638 Type VI secretion system effector, Hcp D0853_RS09105 PF00004 ATPase family associated with various cellular activities (AAA) D0853_RS09105 PF10431 C-terminal, D2-small domain, of ClpB protein D0853_RS09105 PF17871 AAA lid domain D0853_RS09105 PF07724 AAA domain (Cdc48 subfamily) D0853_RS09110 PF02954 Bacterial regulatory protein, Fis family D0853_RS09110 PF00158 Sigma-54 interaction domain D0853_RS09135 PF01551 Peptidase family M23 D0853_RS09135 PF08525 Opacity-associated protein A N-terminal motif D0853_RS09135 PF01476 LysM domain D0853_RS09145 PF03741 Integral membrane protein TerC family D0853_RS09155 PF04055 Radical SAM superfamily D0853_RS09160 PF11230 Protein of unknown function (DUF3029) D0853_RS09165 PF01810 LysE type translocator D0853_RS09170 PF11871 Domain of unknown function (DUF3391) D0853_RS09170 PF01966 HD domain D0853_RS09175 PF00563 EAL domain D0853_RS09175 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS09175 PF03707 Bacterial signalling protein N terminal repeat D0853_RS09180 PF00158 Sigma-54 interaction domain D0853_RS09180 PF02954 Bacterial regulatory protein, Fis family D0853_RS09180 PF00072 Response regulator receiver domain D0853_RS09185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS09185 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS09185 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS09190 PF00939 Sodium:sulfate symporter transmembrane region D0853_RS09205 PF00300 Histidine phosphatase superfamily (branch 1) D0853_RS09225 PF03466 LysR substrate binding domain D0853_RS09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS09230 PF08543 Phosphomethylpyrimidine kinase D0853_RS09235 PF07687 Peptidase dimerisation domain D0853_RS09235 PF01546 Peptidase family M20/M25/M40 D0853_RS09240 PF00924 Mechanosensitive ion channel D0853_RS09240 PF12795 Mechanosensitive ion channel porin domain D0853_RS09240 PF12794 Mechanosensitive ion channel inner membrane domain 1 D0853_RS09255 PF00005 ABC transporter D0853_RS09260 PF02405 Permease MlaE D0853_RS09275 PF13533 Biotin-lipoyl like D0853_RS09320 PF02798 Glutathione S-transferase, N-terminal domain D0853_RS09320 PF14497 Glutathione S-transferase, C-terminal domain D0853_RS09330 PF04209 homogentisate 1,2-dioxygenase D0853_RS09335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0853_RS09345 PF01546 Peptidase family M20/M25/M40 D0853_RS09345 PF07687 Peptidase dimerisation domain D0853_RS09350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS09355 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS09360 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS09360 PF12911 N-terminal TM domain of oligopeptide transport permease C D0853_RS09365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS09365 PF00005 ABC transporter D0853_RS09370 PF00005 ABC transporter D0853_RS09370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS09385 PF08453 Peptidase family M9 N-terminal D0853_RS09385 PF01752 Collagenase D0853_RS09400 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS09410 PF08402 TOBE domain D0853_RS09410 PF00005 ABC transporter D0853_RS09415 PF00701 Dihydrodipicolinate synthetase family D0853_RS09420 PF02423 Ornithine cyclodeaminase/mu-crystallin family D0853_RS09440 PF05544 Proline racemase D0853_RS09445 PF00171 Aldehyde dehydrogenase family D0853_RS09450 PF00392 Bacterial regulatory proteins, gntR family D0853_RS09470 PF05971 RNA methyltransferase D0853_RS09475 PF01863 Protein of unknown function DUF45 D0853_RS09480 PF04991 LicD family D0853_RS09485 PF16363 GDP-mannose 4,6 dehydratase D0853_RS09490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D0853_RS09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS09510 PF03466 LysR substrate binding domain D0853_RS09530 PF00005 ABC transporter D0853_RS09535 PF01032 FecCD transport family D0853_RS09540 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D0853_RS09560 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D0853_RS09565 PF02654 Cobalamin-5-phosphate synthase D0853_RS09570 PF02277 Phosphoribosyltransferase D0853_RS09575 PF13460 NAD(P)H-binding D0853_RS09580 PF00375 Sodium:dicarboxylate symporter family D0853_RS09585 PF00929 Exonuclease D0853_RS09585 PF08411 Exonuclease C-terminal D0853_RS09590 PF03788 LrgA family D0853_RS09595 PF04172 LrgB-like family D0853_RS09600 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D0853_RS09600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0853_RS09605 PF02222 ATP-grasp domain D0853_RS09610 PF05724 Thiopurine S-methyltransferase (TPMT) D0853_RS09620 PF00216 Bacterial DNA-binding protein D0853_RS09635 PF03483 B3/4 domain D0853_RS09635 PF03147 Ferredoxin-fold anticodon binding domain D0853_RS09635 PF01588 Putative tRNA binding domain D0853_RS09635 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D0853_RS09635 PF03484 tRNA synthetase B5 domain D0853_RS09640 PF01409 tRNA synthetases class II core domain (F) D0853_RS09640 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D0853_RS09645 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS09645 PF17158 Membrane-associated sensor, integral membrane domain D0853_RS09675 PF01906 Putative heavy-metal-binding D0853_RS09680 PF00453 Ribosomal protein L20 D0853_RS09685 PF01632 Ribosomal protein L35 D0853_RS09690 PF00707 Translation initiation factor IF-3, C-terminal domain D0853_RS09690 PF05198 Translation initiation factor IF-3, N-terminal domain D0853_RS09695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0853_RS09695 PF03129 Anticodon binding domain D0853_RS09695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D0853_RS09695 PF02824 TGS domain D0853_RS09710 PF00392 Bacterial regulatory proteins, gntR family D0853_RS09710 PF07702 UTRA domain D0853_RS09715 PF01979 Amidohydrolase family D0853_RS09720 PF00491 Arginase family D0853_RS09725 PF17391 Urocanase N-terminal domain D0853_RS09725 PF01175 Urocanase Rossmann-like domain D0853_RS09725 PF17392 Urocanase C-terminal domain D0853_RS09730 PF00221 Aromatic amino acid lyase D0853_RS09740 PF04191 Phospholipid methyltransferase D0853_RS09745 PF01565 FAD binding domain D0853_RS09745 PF13183 4Fe-4S dicluster domain D0853_RS09745 PF02913 FAD linked oxidases, C-terminal domain D0853_RS09760 PF00691 OmpA family D0853_RS09760 PF05736 OprF membrane domain D0853_RS09780 PF01259 SAICAR synthetase D0853_RS09785 PF09423 PhoD-like phosphatase D0853_RS09785 PF16655 PhoD-like phosphatase, N-terminal domain D0853_RS09795 PF02253 Phospholipase A1 D0853_RS09800 PF00270 DEAD/DEAH box helicase D0853_RS09800 PF04408 Helicase associated domain (HA2) D0853_RS09800 PF00271 Helicase conserved C-terminal domain D0853_RS09800 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D0853_RS09805 PF00390 Malic enzyme, N-terminal domain D0853_RS09805 PF03949 Malic enzyme, NAD binding domain D0853_RS09810 PF02698 DUF218 domain D0853_RS09815 PF00939 Sodium:sulfate symporter transmembrane region D0853_RS09820 PF00072 Response regulator receiver domain D0853_RS09820 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS09830 PF00266 Aminotransferase class-V D0853_RS09840 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS09845 PF00005 ABC transporter D0853_RS09845 PF00664 ABC transporter transmembrane region D0853_RS09850 PF00005 ABC transporter D0853_RS09850 PF00664 ABC transporter transmembrane region D0853_RS09855 PF00291 Pyridoxal-phosphate dependent enzyme D0853_RS09860 PF00266 Aminotransferase class-V D0853_RS09870 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS09870 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS09885 PF04994 TfoX C-terminal domain D0853_RS09885 PF04993 TfoX N-terminal domain D0853_RS09905 PF03956 Lysine exporter LysO D0853_RS09915 PF00282 Pyridoxal-dependent decarboxylase conserved domain D0853_RS09920 PF01418 Helix-turn-helix domain, rpiR family D0853_RS09920 PF01380 SIS domain D0853_RS09925 PF00465 Iron-containing alcohol dehydrogenase D0853_RS09935 PF00462 Glutaredoxin D0853_RS09940 PF06826 Predicted Permease Membrane Region D0853_RS09940 PF02080 TrkA-C domain D0853_RS09945 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0853_RS09945 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0853_RS09945 PF07055 Enoyl reductase FAD binding domain D0853_RS09950 PF09317 Domain of unknown function (DUF1974) D0853_RS09950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0853_RS09950 PF02770 Acyl-CoA dehydrogenase, middle domain D0853_RS09950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0853_RS09955 PF00440 Bacterial regulatory proteins, tetR family D0853_RS09955 PF16295 Tetracyclin repressor-like, C-terminal domain D0853_RS09960 PF06965 Na+/H+ antiporter 1 D0853_RS09975 PF00005 ABC transporter D0853_RS09980 PF01554 MatE D0853_RS09985 PF13460 NAD(P)H-binding D0853_RS09985 PF11066 Protein of unknown function (DUF2867) D0853_RS09990 PF03264 NapC/NirT cytochrome c family, N-terminal region D0853_RS10005 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) D0853_RS10020 PF07690 Major Facilitator Superfamily D0853_RS10025 PF00849 RNA pseudouridylate synthase D0853_RS10025 PF01479 S4 domain D0853_RS10030 PF00271 Helicase conserved C-terminal domain D0853_RS10030 PF04851 Type III restriction enzyme, res subunit D0853_RS10040 PF00072 Response regulator receiver domain D0853_RS10040 PF00486 Transcriptional regulatory protein, C terminal D0853_RS10045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS10050 PF01386 Ribosomal L25p family D0853_RS10065 PF02872 5'-nucleotidase, C-terminal domain D0853_RS10065 PF00149 Calcineurin-like phosphoesterase D0853_RS10080 PF06945 Protein of unknown function (DUF1289) D0853_RS10090 PF00072 Response regulator receiver domain D0853_RS10090 PF00196 Bacterial regulatory proteins, luxR family D0853_RS10095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS10095 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS10105 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS10105 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0853_RS10115 PF09335 SNARE associated Golgi protein D0853_RS10120 PF13416 Bacterial extracellular solute-binding protein D0853_RS10125 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS10130 PF00005 ABC transporter D0853_RS10135 PF01066 CDP-alcohol phosphatidyltransferase D0853_RS10150 PF00158 Sigma-54 interaction domain D0853_RS10150 PF01590 GAF domain D0853_RS10155 PF03063 Prismane/CO dehydrogenase family D0853_RS10160 PF00111 2Fe-2S iron-sulfur cluster binding domain D0853_RS10160 PF00970 Oxidoreductase FAD-binding domain D0853_RS10160 PF00175 Oxidoreductase NAD-binding domain D0853_RS10170 PF00849 RNA pseudouridylate synthase D0853_RS10175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS10175 PF12729 Four helix bundle sensory module for signal transduction D0853_RS10175 PF00672 HAMP domain D0853_RS10180 PF00209 Sodium:neurotransmitter symporter family D0853_RS10185 PF13091 PLD-like domain D0853_RS10185 PF13396 Phospholipase_D-nuclease N-terminal D0853_RS10190 PF01053 Cys/Met metabolism PLP-dependent enzyme D0853_RS10195 PF00561 alpha/beta hydrolase fold D0853_RS10200 PF03280 Proteobacterial lipase chaperone protein D0853_RS10205 PF03352 Methyladenine glycosylase D0853_RS10210 PF00873 AcrB/AcrD/AcrF family D0853_RS10215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS10220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS10225 PF04024 PspC domain D0853_RS10230 PF06667 Phage shock protein B D0853_RS10235 PF04012 PspA/IM30 family D0853_RS10240 PF02954 Bacterial regulatory protein, Fis family D0853_RS10240 PF00158 Sigma-54 interaction domain D0853_RS10245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS10250 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS10255 PF12911 N-terminal TM domain of oligopeptide transport permease C D0853_RS10255 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS10260 PF00005 ABC transporter D0853_RS10260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS10265 PF00005 ABC transporter D0853_RS10275 PF02833 DHHA2 domain D0853_RS10275 PF01368 DHH family D0853_RS10285 PF16875 Glycosyl hydrolase family 36 N-terminal domain D0853_RS10285 PF16874 Glycosyl hydrolase family 36 C-terminal domain D0853_RS10290 PF00384 Molybdopterin oxidoreductase D0853_RS10290 PF01568 Molydopterin dinucleotide binding domain D0853_RS10290 PF18364 Molybdopterin oxidoreductase N-terminal domain D0853_RS10295 PF03264 NapC/NirT cytochrome c family, N-terminal region D0853_RS10300 PF06796 Periplasmic nitrate reductase protein NapE D0853_RS10305 PF03649 Uncharacterised protein family (UPF0014) D0853_RS10315 PF01226 Formate/nitrite transporter D0853_RS10340 PF02698 DUF218 domain D0853_RS10345 PF00265 Thymidine kinase D0853_RS10350 PF01406 tRNA synthetases class I (C) catalytic domain D0853_RS10350 PF09190 DALR domain D0853_RS10355 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0853_RS10360 PF00149 Calcineurin-like phosphoesterase D0853_RS10365 PF00563 EAL domain D0853_RS10365 PF08668 HDOD domain D0853_RS10375 PF02810 SEC-C motif D0853_RS10380 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D0853_RS10380 PF01502 Phosphoribosyl-AMP cyclohydrolase D0853_RS10385 PF00977 Histidine biosynthesis protein D0853_RS10390 PF00977 Histidine biosynthesis protein D0853_RS10395 PF00117 Glutamine amidotransferase class-I D0853_RS10400 PF00475 Imidazoleglycerol-phosphate dehydratase D0853_RS10400 PF08645 Polynucleotide kinase 3 phosphatase D0853_RS10405 PF00155 Aminotransferase class I and II D0853_RS10410 PF00815 Histidinol dehydrogenase D0853_RS10415 PF01634 ATP phosphoribosyltransferase D0853_RS10415 PF08029 HisG, C-terminal domain D0853_RS10420 PF00158 Sigma-54 interaction domain D0853_RS10420 PF00072 Response regulator receiver domain D0853_RS10420 PF02954 Bacterial regulatory protein, Fis family D0853_RS10430 PF03553 Na+/H+ antiporter family D0853_RS10435 PF00816 H-NS histone family D0853_RS10440 PF00294 pfkB family carbohydrate kinase D0853_RS10455 PF04356 Protein of unknown function (DUF489) D0853_RS10460 PF08328 Adenylosuccinate lyase C-terminal D0853_RS10460 PF00206 Lyase D0853_RS10500 PF00106 short chain dehydrogenase D0853_RS10510 PF01435 Peptidase family M48 D0853_RS10525 PF08241 Methyltransferase domain D0853_RS10530 PF00155 Aminotransferase class I and II D0853_RS10535 PF04055 Radical SAM superfamily D0853_RS10535 PF06968 Biotin and Thiamin Synthesis associated domain D0853_RS10540 PF00202 Aminotransferase class-III D0853_RS10545 PF01258 Prokaryotic dksA/traR C4-type zinc finger D0853_RS10560 PF02403 Seryl-tRNA synthetase N-terminal domain D0853_RS10560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D0853_RS10565 PF00004 ATPase family associated with various cellular activities (AAA) D0853_RS10565 PF16193 AAA C-terminal domain D0853_RS10565 PF12002 MgsA AAA+ ATPase C terminal D0853_RS10570 PF03548 Outer membrane lipoprotein carrier protein LolA D0853_RS10575 PF17854 FtsK alpha domain D0853_RS10575 PF01580 FtsK/SpoIIIE family D0853_RS10575 PF09397 Ftsk gamma domain D0853_RS10575 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D0853_RS10580 PF01037 Lrp/AsnC ligand binding domain D0853_RS10585 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0853_RS10585 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0853_RS10595 PF03466 LysR substrate binding domain D0853_RS10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS10605 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D0853_RS10610 PF03372 Endonuclease/Exonuclease/phosphatase family D0853_RS10620 PF00579 tRNA synthetases class I (W and Y) D0853_RS10640 PF00873 AcrB/AcrD/AcrF family D0853_RS10645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS10645 PF00529 HlyD membrane-fusion protein of T1SS D0853_RS10660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS10660 PF00672 HAMP domain D0853_RS10660 PF02743 Cache domain D0853_RS10675 PF00899 ThiF family D0853_RS10685 PF00580 UvrD/REP helicase N-terminal domain D0853_RS10685 PF13361 UvrD-like helicase C-terminal domain D0853_RS10720 PF00589 Phage integrase family D0853_RS10720 PF13356 Arm DNA-binding domain D0853_RS10760 PF06610 L-alanine exporter D0853_RS10765 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS10765 PF00072 Response regulator receiver domain D0853_RS10765 PF09308 LuxQ, periplasmic D0853_RS10775 PF03738 Glutathionylspermidine synthase preATP-grasp D0853_RS10785 PF03994 Domain of Unknown Function (DUF350) D0853_RS10795 PF02445 Quinolinate synthetase A protein D0853_RS10800 PF13174 Tetratricopeptide repeat D0853_RS10800 PF16331 TolA binding protein trimerisation D0853_RS10805 PF00691 OmpA family D0853_RS10810 PF04052 TolB amino-terminal domain D0853_RS10810 PF07676 WD40-like Beta Propeller Repeat D0853_RS10820 PF02472 Biopolymer transport protein ExbD/TolR D0853_RS10825 PF01618 MotA/TolQ/ExbB proton channel family D0853_RS10830 PF03061 Thioesterase superfamily D0853_RS10840 PF08173 Membrane bound YbgT-like protein D0853_RS10845 PF02322 Cytochrome bd terminal oxidase subunit II D0853_RS10850 PF01654 Cytochrome bd terminal oxidase subunit I D0853_RS10855 PF17864 RuvB AAA lid domain D0853_RS10855 PF05491 RuvB C-terminal winged helix domain D0853_RS10855 PF05496 Holliday junction DNA helicase RuvB P-loop domain D0853_RS10860 PF01330 RuvA N terminal domain D0853_RS10860 PF07499 RuvA, C-terminal domain D0853_RS10865 PF00672 HAMP domain D0853_RS10865 PF02203 Tar ligand binding domain homologue D0853_RS10865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS10870 PF02075 Crossover junction endodeoxyribonuclease RuvC D0853_RS10875 PF02938 GAD domain D0853_RS10875 PF00152 tRNA synthetases class II (D, K and N) D0853_RS10875 PF01336 OB-fold nucleic acid binding domain D0853_RS10880 PF01904 Protein of unknown function DUF72 D0853_RS10885 PF13649 Methyltransferase domain D0853_RS10890 PF08003 Protein of unknown function (DUF1698) D0853_RS10900 PF18030 RimK PreATP-grasp domain D0853_RS10900 PF08443 RimK-like ATP-grasp domain D0853_RS10910 PF08443 RimK-like ATP-grasp domain D0853_RS10910 PF18030 RimK PreATP-grasp domain D0853_RS10920 PF16330 MukB hinge domain D0853_RS10920 PF04310 MukB N-terminal D0853_RS10925 PF04288 MukE-like family D0853_RS10930 PF17193 MukF C-terminal domain D0853_RS10930 PF17192 MukF middle domain D0853_RS10930 PF03882 MukF winged-helix domain D0853_RS10935 PF13847 Methyltransferase domain D0853_RS10940 PF02698 DUF218 domain D0853_RS10945 PF00486 Transcriptional regulatory protein, C terminal D0853_RS10945 PF00072 Response regulator receiver domain D0853_RS10950 PF02613 Nitrate reductase delta subunit D0853_RS10955 PF00356 Bacterial regulatory proteins, lacI family D0853_RS10960 PF04993 TfoX N-terminal domain D0853_RS10960 PF04994 TfoX C-terminal domain D0853_RS10980 PF08323 Starch synthase catalytic domain D0853_RS10980 PF00534 Glycosyl transferases group 1 D0853_RS10985 PF00483 Nucleotidyl transferase D0853_RS10990 PF08272 Topoisomerase I zinc-ribbon-like D0853_RS10990 PF01131 DNA topoisomerase D0853_RS10990 PF01751 Toprim domain D0853_RS10990 PF01396 Topoisomerase DNA binding C4 zinc finger D0853_RS10995 PF10692 Protein of unknown function (DUF2498) D0853_RS11000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D0853_RS11010 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D0853_RS11015 PF04376 Arginine-tRNA-protein transferase, N terminus D0853_RS11015 PF04377 Arginine-tRNA-protein transferase, C terminus D0853_RS11020 PF01176 Translation initiation factor 1A / IF-1 D0853_RS11030 PF10431 C-terminal, D2-small domain, of ClpB protein D0853_RS11030 PF02861 Clp amino terminal domain, pathogenicity island component D0853_RS11030 PF07724 AAA domain (Cdc48 subfamily) D0853_RS11030 PF00004 ATPase family associated with various cellular activities (AAA) D0853_RS11030 PF17871 AAA lid domain D0853_RS11035 PF02617 ATP-dependent Clp protease adaptor protein ClpS D0853_RS11040 PF00313 'Cold-shock' DNA-binding domain D0853_RS11045 PF03971 Monomeric isocitrate dehydrogenase D0853_RS11050 PF00849 RNA pseudouridylate synthase D0853_RS11055 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0853_RS11065 PF06733 DEAD_2 D0853_RS11065 PF13307 Helicase C-terminal domain D0853_RS11070 PF01925 Sulfite exporter TauE/SafE D0853_RS11075 PF07445 Primosomal replication protein priC D0853_RS11080 PF10689 Protein of unknown function (DUF2496) D0853_RS11085 PF03372 Endonuclease/Exonuclease/phosphatase family D0853_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS11100 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS11105 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS11110 PF00005 ABC transporter D0853_RS11130 PF02901 Pyruvate formate lyase-like D0853_RS11130 PF01228 Glycine radical D0853_RS11140 PF04055 Radical SAM superfamily D0853_RS11150 PF03887 YfbU domain D0853_RS11160 PF08298 PrkA AAA domain D0853_RS11160 PF06798 PrkA serine protein kinase C-terminal domain D0853_RS11165 PF04285 Protein of unknown function (DUF444) D0853_RS11170 PF04293 SpoVR like protein D0853_RS11175 PF02348 Cytidylyltransferase D0853_RS11180 PF03966 Trm112p-like protein D0853_RS11185 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D0853_RS11190 PF00664 ABC transporter transmembrane region D0853_RS11190 PF00005 ABC transporter D0853_RS11195 PF00753 Metallo-beta-lactamase superfamily D0853_RS11195 PF13567 Domain of unknown function (DUF4131) D0853_RS11195 PF03772 Competence protein D0853_RS11205 PF12704 MacB-like periplasmic core domain D0853_RS11205 PF02687 FtsX-like permease family D0853_RS11210 PF00005 ABC transporter D0853_RS11215 PF12704 MacB-like periplasmic core domain D0853_RS11215 PF02687 FtsX-like permease family D0853_RS11225 PF02559 CarD-like/TRCF domain D0853_RS11225 PF00270 DEAD/DEAH box helicase D0853_RS11225 PF00271 Helicase conserved C-terminal domain D0853_RS11225 PF03461 TRCF domain D0853_RS11225 PF17757 UvrB interaction domain D0853_RS11245 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS11255 PF05728 Uncharacterised protein family (UPF0227) D0853_RS11265 PF13036 Peptidoglycan-synthase activator LpoB D0853_RS11265 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D0853_RS11280 PF01230 HIT domain D0853_RS11285 PF00672 HAMP domain D0853_RS11285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS11300 PF01048 Phosphorylase superfamily D0853_RS11305 PF00403 Heavy-metal-associated domain D0853_RS11310 PF00571 CBS domain D0853_RS11310 PF00478 IMP dehydrogenase / GMP reductase domain D0853_RS11325 PF00037 4Fe-4S binding domain D0853_RS11325 PF11953 Domain of unknown function (DUF3470) D0853_RS11330 PF00588 SpoU rRNA Methylase family D0853_RS11330 PF08032 RNA 2'-O ribose methyltransferase substrate binding D0853_RS11340 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS11340 PF17152 Periplasmic sensor domain D0853_RS11350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0853_RS11355 PF09619 Type III secretion system lipoprotein chaperone (YscW) D0853_RS11370 PF01037 Lrp/AsnC ligand binding domain D0853_RS11370 PF13404 AsnC-type helix-turn-helix domain D0853_RS11375 PF00291 Pyridoxal-phosphate dependent enzyme D0853_RS11400 PF00873 AcrB/AcrD/AcrF family D0853_RS11405 PF13533 Biotin-lipoyl like D0853_RS11450 PF07690 Major Facilitator Superfamily D0853_RS11455 PF03601 Conserved hypothetical protein 698 D0853_RS11465 PF13193 AMP-binding enzyme C-terminal domain D0853_RS11465 PF00501 AMP-binding enzyme D0853_RS11470 PF13378 Enolase C-terminal domain-like D0853_RS11475 PF00378 Enoyl-CoA hydratase/isomerase D0853_RS11480 PF12697 Alpha/beta hydrolase family D0853_RS11485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0853_RS11485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0853_RS11485 PF16582 Middle domain of thiamine pyrophosphate D0853_RS11490 PF00425 chorismate binding enzyme D0853_RS11495 PF00155 Aminotransferase class I and II D0853_RS11505 PF01966 HD domain D0853_RS11505 PF13286 Phosphohydrolase-associated domain D0853_RS11525 PF13145 PPIC-type PPIASE domain D0853_RS11530 PF00216 Bacterial DNA-binding protein D0853_RS11535 PF05362 Lon protease (S16) C-terminal proteolytic domain D0853_RS11535 PF00004 ATPase family associated with various cellular activities (AAA) D0853_RS11535 PF02190 ATP-dependent protease La (LON) substrate-binding domain D0853_RS11540 PF10431 C-terminal, D2-small domain, of ClpB protein D0853_RS11540 PF06689 ClpX C4-type zinc finger D0853_RS11540 PF07724 AAA domain (Cdc48 subfamily) D0853_RS11545 PF00574 Clp protease D0853_RS11550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0853_RS11550 PF05698 Bacterial trigger factor protein (TF) C-terminus D0853_RS11550 PF05697 Bacterial trigger factor protein (TF) D0853_RS11555 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS11555 PF02743 Cache domain D0853_RS11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS11560 PF02954 Bacterial regulatory protein, Fis family D0853_RS11560 PF00072 Response regulator receiver domain D0853_RS11560 PF00158 Sigma-54 interaction domain D0853_RS11570 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0853_RS11575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0853_RS11580 PF03480 Bacterial extracellular solute-binding protein, family 7 D0853_RS11585 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D0853_RS11605 PF02386 Cation transport protein D0853_RS11610 PF02254 TrkA-N domain D0853_RS11610 PF02080 TrkA-C domain D0853_RS11615 PF00271 Helicase conserved C-terminal domain D0853_RS11615 PF00270 DEAD/DEAH box helicase D0853_RS11620 PF00571 CBS domain D0853_RS11620 PF03471 Transporter associated domain D0853_RS11620 PF01595 Cyclin M transmembrane N-terminal domain D0853_RS11630 PF04820 Tryptophan halogenase D0853_RS11655 PF00550 Phosphopantetheine attachment site D0853_RS11660 PF00550 Phosphopantetheine attachment site D0853_RS11675 PF07977 FabA-like domain D0853_RS11680 PF00535 Glycosyl transferase family 2 D0853_RS11685 PF00221 Aromatic amino acid lyase D0853_RS11710 PF00109 Beta-ketoacyl synthase, N-terminal domain D0853_RS11710 PF02801 Beta-ketoacyl synthase, C-terminal domain D0853_RS11715 PF07977 FabA-like domain D0853_RS11725 PF02801 Beta-ketoacyl synthase, C-terminal domain D0853_RS11725 PF00109 Beta-ketoacyl synthase, N-terminal domain D0853_RS11740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D0853_RS11740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D0853_RS11745 PF07670 Nucleoside recognition D0853_RS11745 PF01773 Na+ dependent nucleoside transporter N-terminus D0853_RS11745 PF07662 Na+ dependent nucleoside transporter C-terminus D0853_RS11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS11750 PF03466 LysR substrate binding domain D0853_RS11755 PF13406 Transglycosylase SLT domain D0853_RS11760 PF05166 YcgL domain D0853_RS11765 PF05209 Septum formation inhibitor MinC, N-terminal domain D0853_RS11765 PF03775 Septum formation inhibitor MinC, C-terminal domain D0853_RS11770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D0853_RS11775 PF03776 Septum formation topological specificity factor MinE D0853_RS11780 PF01612 3'-5' exonuclease D0853_RS11780 PF00570 HRDC domain D0853_RS11785 PF00501 AMP-binding enzyme D0853_RS11785 PF13193 AMP-binding enzyme C-terminal domain D0853_RS11790 PF00561 alpha/beta hydrolase fold D0853_RS11805 PF00814 Glycoprotease family D0853_RS11810 PF04851 Type III restriction enzyme, res subunit D0853_RS11810 PF13307 Helicase C-terminal domain D0853_RS11815 PF00551 Formyl transferase D0853_RS11815 PF01842 ACT domain D0853_RS11820 PF06185 YecM protein D0853_RS11830 PF00750 tRNA synthetases class I (R) D0853_RS11830 PF03485 Arginyl tRNA synthetase N terminal domain D0853_RS11830 PF05746 DALR anticodon binding domain D0853_RS11845 PF17910 FeoB cytosolic helical domain D0853_RS11845 PF07664 Ferrous iron transport protein B C terminus D0853_RS11845 PF07670 Nucleoside recognition D0853_RS11845 PF02421 Ferrous iron transport protein B D0853_RS11850 PF04023 FeoA domain D0853_RS11865 PF02311 AraC-like ligand binding domain D0853_RS11865 PF12833 Helix-turn-helix domain D0853_RS11870 PF01297 Zinc-uptake complex component A periplasmic D0853_RS11875 PF00005 ABC transporter D0853_RS11880 PF00950 ABC 3 transport family D0853_RS11885 PF00549 CoA-ligase D0853_RS11885 PF02629 CoA binding domain D0853_RS11890 PF00549 CoA-ligase D0853_RS11890 PF08442 ATP-grasp domain D0853_RS11895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0853_RS11895 PF00364 Biotin-requiring enzyme D0853_RS11895 PF02817 e3 binding domain D0853_RS11900 PF16870 2-oxoglutarate dehydrogenase C-terminal D0853_RS11900 PF02779 Transketolase, pyrimidine binding domain D0853_RS11900 PF16078 2-oxoglutarate dehydrogenase N-terminus D0853_RS11900 PF00676 Dehydrogenase E1 component D0853_RS11905 PF13085 2Fe-2S iron-sulfur cluster binding domain D0853_RS11910 PF02910 Fumarate reductase flavoprotein C-term D0853_RS11910 PF00890 FAD binding domain D0853_RS11915 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0853_RS11920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D0853_RS11925 PF00285 Citrate synthase, C-terminal domain D0853_RS11930 PF01784 NIF3 (NGG1p interacting factor 3) D0853_RS11940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0853_RS11940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0853_RS11940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0853_RS11940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0853_RS11945 PF03925 SeqA protein C-terminal domain D0853_RS11945 PF17206 SeqA protein N-terminal domain D0853_RS11950 PF00561 alpha/beta hydrolase fold D0853_RS11960 PF00258 Flavodoxin D0853_RS11970 PF01475 Ferric uptake regulator family D0853_RS11975 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0853_RS11975 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D0853_RS11980 PF02378 Phosphotransferase system, EIIC D0853_RS11980 PF00367 phosphotransferase system, EIIB D0853_RS11990 PF01979 Amidohydrolase family D0853_RS11995 PF01047 MarR family D0853_RS11995 PF00480 ROK family D0853_RS12000 PF02254 TrkA-N domain D0853_RS12000 PF00999 Sodium/hydrogen exchanger family D0853_RS12005 PF13537 Glutamine amidotransferase domain D0853_RS12005 PF00733 Asparagine synthase D0853_RS12010 PF02357 Transcription termination factor nusG D0853_RS12015 PF00854 POT family D0853_RS12020 PF00762 Ferrochelatase D0853_RS12025 PF05191 Adenylate kinase, active site lid D0853_RS12030 PF00183 Hsp90 protein D0853_RS12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS12035 PF00486 Transcriptional regulatory protein, C terminal D0853_RS12040 PF17323 Trans-membrane regulatory protein ToxS D0853_RS12055 PF12850 Calcineurin-like phosphoesterase superfamily domain D0853_RS12075 PF07556 Protein of unknown function (DUF1538) D0853_RS12080 PF07556 Protein of unknown function (DUF1538) D0853_RS12085 PF01370 NAD dependent epimerase/dehydratase family D0853_RS12085 PF08338 Domain of unknown function (DUF1731) D0853_RS12090 PF00106 short chain dehydrogenase D0853_RS12100 PF00085 Thioredoxin D0853_RS12105 PF16200 C-terminal region of band_7 D0853_RS12105 PF01145 SPFH domain / Band 7 family D0853_RS12120 PF03573 outer membrane porin, OprD family D0853_RS12130 PF12826 Helix-hairpin-helix motif D0853_RS12130 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D0853_RS12130 PF03120 NAD-dependent DNA ligase OB-fold domain D0853_RS12130 PF01653 NAD-dependent DNA ligase adenylation domain D0853_RS12130 PF00533 BRCA1 C Terminus (BRCT) domain D0853_RS12135 PF04354 ZipA, C-terminal FtsZ-binding domain D0853_RS12145 PF00291 Pyridoxal-phosphate dependent enzyme D0853_RS12155 PF00381 PTS HPr component phosphorylation site D0853_RS12160 PF00391 PEP-utilising enzyme, mobile domain D0853_RS12160 PF02896 PEP-utilising enzyme, TIM barrel domain D0853_RS12160 PF05524 PEP-utilising enzyme, N-terminal D0853_RS12165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D0853_RS12175 PF00669 Bacterial flagellin N-terminal helical region D0853_RS12175 PF07196 Flagellin hook IN motif D0853_RS12175 PF00700 Bacterial flagellin C-terminal helical region D0853_RS12180 PF07196 Flagellin hook IN motif D0853_RS12180 PF00669 Bacterial flagellin N-terminal helical region D0853_RS12180 PF00700 Bacterial flagellin C-terminal helical region D0853_RS12190 PF00700 Bacterial flagellin C-terminal helical region D0853_RS12190 PF07196 Flagellin hook IN motif D0853_RS12190 PF00669 Bacterial flagellin N-terminal helical region D0853_RS12200 PF00669 Bacterial flagellin N-terminal helical region D0853_RS12205 PF07196 Flagellin hook IN motif D0853_RS12205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS12210 PF10135 Rod binding protein D0853_RS12210 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0853_RS12215 PF02119 Flagellar P-ring protein D0853_RS12220 PF02107 Flagellar L-ring protein D0853_RS12225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS12225 PF00460 Flagella basal body rod protein D0853_RS12230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS12230 PF00460 Flagella basal body rod protein D0853_RS12240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS12240 PF07559 Flagellar basal body protein FlaE D0853_RS12240 PF00460 Flagella basal body rod protein D0853_RS12245 PF13861 FlgD Tudor-like domain D0853_RS12245 PF13860 FlgD Ig-like domain D0853_RS12245 PF03963 Flagellar hook capping protein - N-terminal region D0853_RS12250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS12250 PF00460 Flagella basal body rod protein D0853_RS12255 PF00460 Flagella basal body rod protein D0853_RS12260 PF03705 CheR methyltransferase, all-alpha domain D0853_RS12260 PF01739 CheR methyltransferase, SAM binding domain D0853_RS12265 PF00072 Response regulator receiver domain D0853_RS12265 PF01584 CheW-like domain D0853_RS12315 PF00691 OmpA family D0853_RS12315 PF01389 OmpA-like transmembrane domain D0853_RS12325 PF00749 tRNA synthetases class I (E and Q), catalytic domain D0853_RS12330 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0853_RS12335 PF13609 Gram-negative porin D0853_RS12345 PF00403 Heavy-metal-associated domain D0853_RS12360 PF02838 Glycosyl hydrolase family 20, domain 2 D0853_RS12360 PF03173 Putative carbohydrate binding domain D0853_RS12360 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D0853_RS12360 PF00728 Glycosyl hydrolase family 20, catalytic domain D0853_RS12385 PF01713 Smr domain D0853_RS12390 PF00849 RNA pseudouridylate synthase D0853_RS12390 PF01479 S4 domain D0853_RS12395 PF04073 Aminoacyl-tRNA editing domain D0853_RS12400 PF02872 5'-nucleotidase, C-terminal domain D0853_RS12400 PF00149 Calcineurin-like phosphoesterase D0853_RS12405 PF00793 DAHP synthetase I family D0853_RS12410 PF13369 Transglutaminase-like superfamily D0853_RS12415 PF04247 Invasion gene expression up-regulator, SirB D0853_RS12420 PF13847 Methyltransferase domain D0853_RS12420 PF17827 PrmC N-terminal domain D0853_RS12425 PF00472 RF-1 domain D0853_RS12425 PF03462 PCRF domain D0853_RS12430 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D0853_RS12430 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D0853_RS12430 PF01488 Shikimate / quinate 5-dehydrogenase D0853_RS12435 PF03550 Outer membrane lipoprotein LolB D0853_RS12440 PF08544 GHMP kinases C terminal D0853_RS12440 PF00288 GHMP kinases N terminal domain D0853_RS12445 PF14572 Phosphoribosyl synthetase-associated domain D0853_RS12445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D0853_RS12450 PF01195 Peptidyl-tRNA hydrolase D0853_RS12455 PF06071 Protein of unknown function (DUF933) D0853_RS12455 PF01926 50S ribosome-binding GTPase D0853_RS12570 PF01494 FAD binding domain D0853_RS12580 PF04055 Radical SAM superfamily D0853_RS12580 PF01938 TRAM domain D0853_RS12580 PF00919 Uncharacterized protein family UPF0004 D0853_RS12585 PF02562 PhoH-like protein D0853_RS12590 PF02130 Uncharacterized protein family UPF0054 D0853_RS12595 PF03471 Transporter associated domain D0853_RS12595 PF00571 CBS domain D0853_RS12600 PF00795 Carbon-nitrogen hydrolase D0853_RS12605 PF07295 Zinc-ribbon containing domain D0853_RS12610 PF13603 Leucyl-tRNA synthetase, Domain 2 D0853_RS12610 PF08264 Anticodon-binding domain of tRNA D0853_RS12610 PF00133 tRNA synthetases class I (I, L, M and V) D0853_RS12615 PF04390 Lipopolysaccharide-assembly D0853_RS12620 PF14840 Processivity clamp loader gamma complex DNA pol III C-term D0853_RS12620 PF06144 DNA polymerase III, delta subunit D0853_RS12630 PF02590 Predicted SPOUT methyltransferase D0853_RS12635 PF00905 Penicillin binding protein transpeptidase domain D0853_RS12635 PF03717 Penicillin-binding Protein dimerisation domain D0853_RS12640 PF01098 Cell cycle protein D0853_RS12645 PF03330 Lytic transglycolase D0853_RS12645 PF05036 Sporulation related domain D0853_RS12650 PF00768 D-alanyl-D-alanine carboxypeptidase D0853_RS12650 PF07943 Penicillin-binding protein 5, C-terminal domain D0853_RS12655 PF04359 Protein of unknown function (DUF493) D0853_RS12660 PF03099 Biotin/lipoate A/B protein ligase family D0853_RS12665 PF04055 Radical SAM superfamily D0853_RS12665 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D0853_RS12670 PF00464 Serine hydroxymethyltransferase D0853_RS12675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0853_RS12675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D0853_RS12690 PF00128 Alpha amylase, catalytic domain D0853_RS12690 PF16657 Maltogenic Amylase, C-terminal domain D0853_RS12695 PF02378 Phosphotransferase system, EIIC D0853_RS12695 PF00367 phosphotransferase system, EIIB D0853_RS12700 PF00356 Bacterial regulatory proteins, lacI family D0853_RS12715 PF09383 NIL domain D0853_RS12715 PF00005 ABC transporter D0853_RS12720 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS12725 PF03180 NLPA lipoprotein D0853_RS12730 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D0853_RS12735 PF07348 Syd protein (SUKH-2) D0853_RS12740 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D0853_RS12740 PF14489 QueF-like protein D0853_RS12750 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS12755 PF11892 Domain of unknown function (DUF3412) D0853_RS12755 PF03641 Possible lysine decarboxylase D0853_RS12755 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D0853_RS12760 PF01367 5'-3' exonuclease, C-terminal SAM fold D0853_RS12760 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0853_RS12765 PF01223 DNA/RNA non-specific endonuclease D0853_RS12770 PF18125 RlmM ferredoxin-like domain D0853_RS12770 PF01728 FtsJ-like methyltransferase D0853_RS12775 PF04241 Protein of unknown function (DUF423) D0853_RS12785 PF03466 LysR substrate binding domain D0853_RS12785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS12790 PF02926 THUMP domain D0853_RS12790 PF02568 Thiamine biosynthesis protein (ThiI) D0853_RS12795 PF00691 OmpA family D0853_RS12800 PF01618 MotA/TolQ/ExbB proton channel family D0853_RS12805 PF02609 Exonuclease VII small subunit D0853_RS12810 PF00348 Polyprenyl synthetase D0853_RS12815 PF02779 Transketolase, pyrimidine binding domain D0853_RS12815 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D0853_RS12815 PF02780 Transketolase, C-terminal domain D0853_RS12820 PF04608 Phosphatidylglycerophosphatase A D0853_RS12825 PF02769 AIR synthase related protein, C-terminal domain D0853_RS12825 PF00586 AIR synthase related protein, N-terminal domain D0853_RS12830 PF01029 NusB family D0853_RS12835 PF00885 6,7-dimethyl-8-ribityllumazine synthase D0853_RS12840 PF00925 GTP cyclohydrolase II D0853_RS12840 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0853_RS12845 PF00677 Lumazine binding domain D0853_RS12850 PF01872 RibD C-terminal domain D0853_RS12850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0853_RS12855 PF03477 ATP cone domain D0853_RS12860 PF00171 Aldehyde dehydrogenase family D0853_RS12865 PF00696 Amino acid kinase family D0853_RS12865 PF01472 PUA domain D0853_RS12870 PF07417 Sigma factor-binding transcriptional regulator Crl D0853_RS12875 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) D0853_RS12880 PF00156 Phosphoribosyl transferase domain D0853_RS12885 PF00860 Permease family D0853_RS12890 PF07687 Peptidase dimerisation domain D0853_RS12890 PF01546 Peptidase family M20/M25/M40 D0853_RS12915 PF02769 AIR synthase related protein, C-terminal domain D0853_RS12915 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D0853_RS12915 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D0853_RS12920 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS12920 PF01464 Transglycosylase SLT domain D0853_RS12930 PF14437 MafB19-like deaminase D0853_RS12935 PF03806 AbgT putative transporter family D0853_RS12960 PF00114 Pilin (bacterial filament) D0853_RS12960 PF07963 Prokaryotic N-terminal methylation motif D0853_RS12965 PF07963 Prokaryotic N-terminal methylation motif D0853_RS12965 PF00114 Pilin (bacterial filament) D0853_RS12975 PF00226 DnaJ domain D0853_RS12975 PF01556 DnaJ C terminal domain D0853_RS12975 PF00684 DnaJ central domain D0853_RS12980 PF00012 Hsp70 protein D0853_RS12985 PF00375 Sodium:dicarboxylate symporter family D0853_RS12990 PF01025 GrpE D0853_RS12995 PF01513 ATP-NAD kinase D0853_RS13005 PF02463 RecF/RecN/SMC N terminal domain D0853_RS13010 PF04355 SmpA / OmlA family D0853_RS13015 PF03658 RnfH family Ubiquitin D0853_RS13020 PF03364 Polyketide cyclase / dehydrase and lipid transport D0853_RS13025 PF01668 SmpB protein D0853_RS13035 PF13356 Arm DNA-binding domain D0853_RS13035 PF00589 Phage integrase family D0853_RS13045 PF12833 Helix-turn-helix domain D0853_RS13070 PF00075 RNase H D0853_RS13090 PF00239 Resolvase, N terminal domain D0853_RS13090 PF02796 Helix-turn-helix domain of resolvase D0853_RS13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS13110 PF03466 LysR substrate binding domain D0853_RS13115 PF00795 Carbon-nitrogen hydrolase D0853_RS13115 PF00583 Acetyltransferase (GNAT) family D0853_RS13135 PF00202 Aminotransferase class-III D0853_RS13140 PF01053 Cys/Met metabolism PLP-dependent enzyme D0853_RS13150 PF07969 Amidohydrolase family D0853_RS13175 PF01266 FAD dependent oxidoreductase D0853_RS13180 PF01235 Sodium:alanine symporter family D0853_RS13190 PF01184 GPR1/FUN34/yaaH family D0853_RS13195 PF00704 Glycosyl hydrolases family 18 D0853_RS13195 PF06483 Chitinase C D0853_RS13200 PF03553 Na+/H+ antiporter family D0853_RS13205 PF00958 GMP synthase C terminal domain D0853_RS13205 PF00117 Glutamine amidotransferase class-I D0853_RS13205 PF02540 NAD synthase D0853_RS13210 PF00571 CBS domain D0853_RS13210 PF00478 IMP dehydrogenase / GMP reductase domain D0853_RS13215 PF02601 Exonuclease VII, large subunit D0853_RS13215 PF13742 OB-fold nucleic acid binding domain D0853_RS13230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D0853_RS13230 PF01926 50S ribosome-binding GTPase D0853_RS13235 PF13360 PQQ-like domain D0853_RS13240 PF09976 Tetratricopeptide repeat-like domain D0853_RS13245 PF13393 Histidyl-tRNA synthetase D0853_RS13245 PF03129 Anticodon binding domain D0853_RS13250 PF04551 GcpE protein D0853_RS13255 PF13464 Domain of unknown function (DUF4115) D0853_RS13265 PF04055 Radical SAM superfamily D0853_RS13270 PF00334 Nucleoside diphosphate kinase D0853_RS13275 PF12404 Peptidase D0853_RS13275 PF00883 Cytosol aminopeptidase family, catalytic domain D0853_RS13280 PF04384 Iron-sulphur cluster assembly D0853_RS13285 PF00111 2Fe-2S iron-sulfur cluster binding domain D0853_RS13290 PF00012 Hsp70 protein D0853_RS13295 PF07743 HSCB C-terminal oligomerisation domain D0853_RS13295 PF00226 DnaJ domain D0853_RS13300 PF01521 Iron-sulphur cluster biosynthesis D0853_RS13305 PF01592 NifU-like N terminal domain D0853_RS13310 PF00266 Aminotransferase class-V D0853_RS13315 PF02082 Transcriptional regulator D0853_RS13320 PF00588 SpoU rRNA Methylase family D0853_RS13325 PF00459 Inositol monophosphatase family D0853_RS13335 PF07549 SecD/SecF GG Motif D0853_RS13335 PF02355 Protein export membrane protein D0853_RS13340 PF02355 Protein export membrane protein D0853_RS13340 PF13721 SecD export protein N-terminal TM region D0853_RS13340 PF07549 SecD/SecF GG Motif D0853_RS13345 PF02699 Preprotein translocase subunit D0853_RS13350 PF01702 Queuine tRNA-ribosyltransferase D0853_RS13355 PF02547 Queuosine biosynthesis protein D0853_RS13370 PF00571 CBS domain D0853_RS13375 PF00463 Isocitrate lyase family D0853_RS13380 PF01274 Malate synthase D0853_RS13390 PF03466 LysR substrate binding domain D0853_RS13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS13395 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0853_RS13395 PF00578 AhpC/TSA family D0853_RS13405 PF03932 CutC family D0853_RS13410 PF03976 Polyphosphate kinase 2 (PPK2) D0853_RS13415 PF01895 PhoU domain D0853_RS13420 PF00005 ABC transporter D0853_RS13425 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS13430 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS13435 PF17941 Polyphosphate kinase C-terminal domain 1 D0853_RS13435 PF02503 Polyphosphate kinase middle domain D0853_RS13435 PF13090 Polyphosphate kinase C-terminal domain 2 D0853_RS13435 PF13089 Polyphosphate kinase N-terminal domain D0853_RS13440 PF02541 Ppx/GppA phosphatase family D0853_RS13445 PF12849 PBP superfamily domain D0853_RS13450 PF11808 Phosphate regulon sensor protein PhoR D0853_RS13450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS13450 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS13450 PF00989 PAS fold D0853_RS13455 PF00072 Response regulator receiver domain D0853_RS13455 PF00486 Transcriptional regulatory protein, C terminal D0853_RS13465 PF04381 Putative exonuclease, RdgC D0853_RS13470 PF01136 Peptidase family U32 D0853_RS13470 PF16325 Peptidase family U32 C-terminal domain D0853_RS13475 PF00037 4Fe-4S binding domain D0853_RS13485 PF03411 Penicillin-insensitive murein endopeptidase D0853_RS13535 PF10431 C-terminal, D2-small domain, of ClpB protein D0853_RS13535 PF02861 Clp amino terminal domain, pathogenicity island component D0853_RS13535 PF07724 AAA domain (Cdc48 subfamily) D0853_RS13535 PF00004 ATPase family associated with various cellular activities (AAA) D0853_RS13535 PF17871 AAA lid domain D0853_RS13540 PF02578 Multi-copper polyphenol oxidoreductase laccase D0853_RS13545 PF00849 RNA pseudouridylate synthase D0853_RS13545 PF01479 S4 domain D0853_RS13550 PF13525 Outer membrane lipoprotein D0853_RS13555 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS13555 PF01464 Transglycosylase SLT domain D0853_RS13560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D0853_RS13565 PF01817 Chorismate mutase type II D0853_RS13565 PF00800 Prephenate dehydratase D0853_RS13570 PF01931 Protein of unknown function DUF84 D0853_RS13575 PF01371 Trp repressor protein D0853_RS13580 PF14718 Soluble lytic murein transglycosylase L domain D0853_RS13580 PF01464 Transglycosylase SLT domain D0853_RS13585 PF00005 ABC transporter D0853_RS13585 PF12848 ABC transporter D0853_RS13595 PF07238 PilZ domain D0853_RS13600 PF01551 Peptidase family M23 D0853_RS13600 PF04225 Opacity-associated protein A LysM-like domain D0853_RS13605 PF01817 Chorismate mutase type II D0853_RS13605 PF02153 Prephenate dehydrogenase D0853_RS13610 PF00793 DAHP synthetase I family D0853_RS13615 PF00933 Glycosyl hydrolase family 3 N terminal domain D0853_RS13620 PF03702 Anhydro-N-acetylmuramic acid kinase D0853_RS13625 PF13580 SIS domain D0853_RS13640 PF02554 Carbon starvation protein CstA D0853_RS13645 PF07694 5TMR of 5TMR-LYT D0853_RS13645 PF06580 Histidine kinase D0853_RS13650 PF04397 LytTr DNA-binding domain D0853_RS13650 PF00072 Response regulator receiver domain D0853_RS13655 PF02401 LytB protein D0853_RS13660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0853_RS13665 PF01252 Signal peptidase (SPase) II D0853_RS13670 PF08264 Anticodon-binding domain of tRNA D0853_RS13670 PF06827 Zinc finger found in FPG and IleRS D0853_RS13670 PF00133 tRNA synthetases class I (I, L, M and V) D0853_RS13675 PF01687 Riboflavin kinase D0853_RS13675 PF06574 FAD synthetase D0853_RS13680 PF03023 Lipid II flippase MurJ D0853_RS13685 PF01649 Ribosomal protein S20 D0853_RS13695 PF01022 Bacterial regulatory protein, arsR family D0853_RS13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS13705 PF03466 LysR substrate binding domain D0853_RS13710 PF02690 Na+/Pi-cotransporter D0853_RS13720 PF00303 Thymidylate synthase D0853_RS13725 PF01790 Prolipoprotein diacylglyceryl transferase D0853_RS13730 PF01925 Sulfite exporter TauE/SafE D0853_RS13735 PF00391 PEP-utilising enzyme, mobile domain D0853_RS13735 PF02896 PEP-utilising enzyme, TIM barrel domain D0853_RS13735 PF05524 PEP-utilising enzyme, N-terminal D0853_RS13735 PF01590 GAF domain D0853_RS13740 PF00293 NUDIX domain D0853_RS13750 PF02976 DNA mismatch repair enzyme MutH D0853_RS13760 PF00248 Aldo/keto reductase family D0853_RS13770 PF02954 Bacterial regulatory protein, Fis family D0853_RS13770 PF00158 Sigma-54 interaction domain D0853_RS13770 PF00072 Response regulator receiver domain D0853_RS13775 PF00152 tRNA synthetases class II (D, K and N) D0853_RS13775 PF01336 OB-fold nucleic acid binding domain D0853_RS13785 PF17768 RecJ OB domain D0853_RS13785 PF01368 DHH family D0853_RS13785 PF02272 DHHA1 domain D0853_RS13790 PF10411 Disulfide bond isomerase protein N-terminus D0853_RS13790 PF13098 Thioredoxin-like domain D0853_RS13795 PF02899 Phage integrase, N-terminal SAM-like domain D0853_RS13795 PF00589 Phage integrase family D0853_RS13800 PF00258 Flavodoxin D0853_RS13805 PF05525 Branched-chain amino acid transport protein D0853_RS13810 PF05175 Methyltransferase small domain D0853_RS13815 PF00270 DEAD/DEAH box helicase D0853_RS13815 PF00271 Helicase conserved C-terminal domain D0853_RS13820 PF03883 Peroxide stress protein YaaA D0853_RS13825 PF01235 Sodium:alanine symporter family D0853_RS13840 PF03167 Uracil DNA glycosylase superfamily D0853_RS13850 PF01261 Xylose isomerase-like TIM barrel D0853_RS13855 PF01228 Glycine radical D0853_RS13860 PF14821 Threonine synthase N terminus D0853_RS13860 PF00291 Pyridoxal-phosphate dependent enzyme D0853_RS13865 PF00288 GHMP kinases N terminal domain D0853_RS13865 PF08544 GHMP kinases C terminal D0853_RS13870 PF00696 Amino acid kinase family D0853_RS13870 PF00742 Homoserine dehydrogenase D0853_RS13870 PF13840 ACT domain D0853_RS13870 PF03447 Homoserine dehydrogenase, NAD binding domain D0853_RS13870 PF01842 ACT domain D0853_RS13880 PF03737 Aldolase/RraA D0853_RS13895 PF00486 Transcriptional regulatory protein, C terminal D0853_RS13895 PF00072 Response regulator receiver domain D0853_RS13905 PF18415 Histidine kinase receptor ArcB trans-membrane domain D0853_RS13905 PF01627 Hpt domain D0853_RS13905 PF00989 PAS fold D0853_RS13905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS13905 PF00072 Response regulator receiver domain D0853_RS13905 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS13910 PF00360 Phytochrome region D0853_RS13910 PF00563 EAL domain D0853_RS13910 PF01590 GAF domain D0853_RS13910 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS13915 PF16199 Radical_SAM C-terminal domain D0853_RS13915 PF04055 Radical SAM superfamily D0853_RS13920 PF00310 Glutamine amidotransferases class-II D0853_RS13920 PF01493 GXGXG motif D0853_RS13920 PF04898 Glutamate synthase central domain D0853_RS13920 PF01645 Conserved region in glutamate synthase D0853_RS13925 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS13925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0853_RS13930 PF01493 GXGXG motif D0853_RS13930 PF00310 Glutamine amidotransferases class-II D0853_RS13930 PF04898 Glutamate synthase central domain D0853_RS13930 PF01645 Conserved region in glutamate synthase D0853_RS13935 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS13935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D0853_RS13945 PF01048 Phosphorylase superfamily D0853_RS13950 PF03186 CobD/Cbib protein D0853_RS13950 PF17113 Regulatory signalling modulator protein AmpE D0853_RS13955 PF01497 Periplasmic binding protein D0853_RS13960 PF03458 UPF0126 domain D0853_RS13965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS13965 PF03466 LysR substrate binding domain D0853_RS13970 PF01925 Sulfite exporter TauE/SafE D0853_RS13985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D0853_RS13985 PF02142 MGS-like domain D0853_RS13985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0853_RS13990 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D0853_RS13990 PF00117 Glutamine amidotransferase class-I D0853_RS13995 PF01113 Dihydrodipicolinate reductase, N-terminus D0853_RS13995 PF05173 Dihydrodipicolinate reductase, C-terminus D0853_RS14000 PF00293 NUDIX domain D0853_RS14005 PF07517 SecA DEAD-like domain D0853_RS14005 PF01043 SecA preprotein cross-linking domain D0853_RS14005 PF07516 SecA Wing and Scaffold domain D0853_RS14005 PF02810 SEC-C motif D0853_RS14015 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D0853_RS14020 PF12327 FtsZ family, C-terminal domain D0853_RS14020 PF00091 Tubulin/FtsZ family, GTPase domain D0853_RS14025 PF02491 SHS2 domain inserted in FTSA D0853_RS14030 PF08478 POTRA domain, FtsQ-type D0853_RS14030 PF03799 Cell division protein FtsQ D0853_RS14035 PF08245 Mur ligase middle domain D0853_RS14035 PF01225 Mur ligase family, catalytic domain D0853_RS14035 PF02875 Mur ligase family, glutamate ligase domain D0853_RS14040 PF04101 Glycosyltransferase family 28 C-terminal domain D0853_RS14040 PF03033 Glycosyltransferase family 28 N-terminal domain D0853_RS14045 PF01098 Cell cycle protein D0853_RS14050 PF08245 Mur ligase middle domain D0853_RS14050 PF02875 Mur ligase family, glutamate ligase domain D0853_RS14055 PF00953 Glycosyl transferase family 4 D0853_RS14055 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D0853_RS14060 PF08245 Mur ligase middle domain D0853_RS14060 PF01225 Mur ligase family, catalytic domain D0853_RS14060 PF02875 Mur ligase family, glutamate ligase domain D0853_RS14065 PF08245 Mur ligase middle domain D0853_RS14065 PF01225 Mur ligase family, catalytic domain D0853_RS14065 PF02875 Mur ligase family, glutamate ligase domain D0853_RS14070 PF00905 Penicillin binding protein transpeptidase domain D0853_RS14070 PF03717 Penicillin-binding Protein dimerisation domain D0853_RS14075 PF04999 Cell division protein FtsL D0853_RS14080 PF01795 MraW methylase family D0853_RS14095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0853_RS14100 PF04348 LppC putative lipoprotein D0853_RS14105 PF02021 Uncharacterised protein family UPF0102 D0853_RS14110 PF13580 SIS domain D0853_RS14115 PF04972 BON domain D0853_RS14120 PF04386 Stringent starvation protein B D0853_RS14125 PF00043 Glutathione S-transferase, C-terminal domain D0853_RS14125 PF02798 Glutathione S-transferase, N-terminal domain D0853_RS14130 PF02167 Cytochrome C1 family D0853_RS14135 PF00033 Cytochrome b/b6/petB D0853_RS14135 PF00032 Cytochrome b(C-terminal)/b6/petD D0853_RS14140 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D0853_RS14140 PF00355 Rieske [2Fe-2S] domain D0853_RS14145 PF00380 Ribosomal protein S9/S16 D0853_RS14150 PF00572 Ribosomal protein L13 D0853_RS14160 PF03969 AFG1-like ATPase D0853_RS14170 PF06295 Protein of unknown function (DUF1043) D0853_RS14175 PF00595 PDZ domain D0853_RS14180 PF13180 PDZ domain D0853_RS14185 PF00521 DNA gyrase/topoisomerase IV, subunit A D0853_RS14185 PF03989 DNA gyrase C-terminal domain, beta-propeller D0853_RS14190 PF01751 Toprim domain D0853_RS14190 PF00204 DNA gyrase B D0853_RS14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS14190 PF00986 DNA gyrase B subunit, carboxyl terminus D0853_RS14195 PF05728 Uncharacterised protein family (UPF0227) D0853_RS14200 PF00149 Calcineurin-like phosphoesterase D0853_RS14205 PF06853 Protein of unknown function (DUF1249) D0853_RS14210 PF00293 NUDIX domain D0853_RS14215 PF02321 Outer membrane efflux protein D0853_RS14220 PF01467 Cytidylyltransferase-like D0853_RS14220 PF00294 pfkB family carbohydrate kinase D0853_RS14225 PF03710 Glutamate-ammonia ligase adenylyltransferase D0853_RS14225 PF08335 GlnD PII-uridylyltransferase D0853_RS14230 PF00672 HAMP domain D0853_RS14230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS14240 PF01928 CYTH domain D0853_RS14245 PF01865 Protein of unknown function DUF47 D0853_RS14250 PF01384 Phosphate transporter family D0853_RS14255 PF08239 Bacterial SH3 domain D0853_RS14265 PF13401 AAA domain D0853_RS14265 PF01471 Putative peptidoglycan binding domain D0853_RS14270 PF01966 HD domain D0853_RS14270 PF12627 Probable RNA and SrmB- binding site of polymerase A D0853_RS14270 PF01743 Poly A polymerase head domain D0853_RS14275 PF02673 Bacitracin resistance protein BacA D0853_RS14280 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D0853_RS14285 PF02152 Dihydroneopterin aldolase D0853_RS14290 PF02660 Glycerol-3-phosphate acyltransferase D0853_RS14295 PF12697 Alpha/beta hydrolase family D0853_RS14300 PF00814 Glycoprotease family D0853_RS14305 PF01165 Ribosomal protein S21 D0853_RS14310 PF09424 Yqey-like protein D0853_RS14315 PF01807 CHC2 zinc finger D0853_RS14315 PF10410 DnaB-helicase binding domain of primase D0853_RS14315 PF08278 DNA primase DnaG DnaB-binding D0853_RS14315 PF08275 DNA primase catalytic core, N-terminal domain D0853_RS14320 PF00140 Sigma-70 factor, region 1.2 D0853_RS14320 PF04542 Sigma-70 region 2 D0853_RS14320 PF04545 Sigma-70, region 4 D0853_RS14320 PF03979 Sigma-70 factor, region 1.1 D0853_RS14320 PF04539 Sigma-70 region 3 D0853_RS14320 PF04546 Sigma-70, non-essential region D0853_RS14335 PF13657 HipA N-terminal domain D0853_RS14335 PF07804 HipA-like C-terminal domain D0853_RS14370 PF08463 EcoEI R protein C-terminal D0853_RS14370 PF04851 Type III restriction enzyme, res subunit D0853_RS14370 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) D0853_RS14370 PF00271 Helicase conserved C-terminal domain D0853_RS14375 PF01555 DNA methylase D0853_RS14405 PF12161 HsdM N-terminal domain D0853_RS14405 PF02384 N-6 DNA Methylase D0853_RS14410 PF01420 Type I restriction modification DNA specificity domain D0853_RS14455 PF03180 NLPA lipoprotein D0853_RS14465 PF12833 Helix-turn-helix domain D0853_RS14500 PF02378 Phosphotransferase system, EIIC D0853_RS14500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0853_RS14500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0853_RS14505 PF01232 Mannitol dehydrogenase Rossmann domain D0853_RS14505 PF08125 Mannitol dehydrogenase C-terminal domain D0853_RS14510 PF05068 Mannitol repressor D0853_RS14515 PF00158 Sigma-54 interaction domain D0853_RS14515 PF00989 PAS fold D0853_RS14515 PF02954 Bacterial regulatory protein, Fis family D0853_RS14520 PF02896 PEP-utilising enzyme, TIM barrel domain D0853_RS14520 PF00391 PEP-utilising enzyme, mobile domain D0853_RS14520 PF05524 PEP-utilising enzyme, N-terminal D0853_RS14525 PF02734 DAK2 domain D0853_RS14530 PF02733 Dak1 domain D0853_RS14535 PF00465 Iron-containing alcohol dehydrogenase D0853_RS14540 PF00672 HAMP domain D0853_RS14540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS14540 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS14545 PF00486 Transcriptional regulatory protein, C terminal D0853_RS14545 PF00072 Response regulator receiver domain D0853_RS14555 PF01380 SIS domain D0853_RS14560 PF08220 DeoR-like helix-turn-helix domain D0853_RS14560 PF00455 DeoR C terminal sensor domain D0853_RS14570 PF00224 Pyruvate kinase, barrel domain D0853_RS14570 PF02887 Pyruvate kinase, alpha/beta domain D0853_RS14580 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS14585 PF10369 Small subunit of acetolactate synthase D0853_RS14590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0853_RS14590 PF00205 Thiamine pyrophosphate enzyme, central domain D0853_RS14590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0853_RS14595 PF00501 AMP-binding enzyme D0853_RS14600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS14600 PF03466 LysR substrate binding domain D0853_RS14620 PF00682 HMGL-like D0853_RS14620 PF08502 LeuA allosteric (dimerisation) domain D0853_RS14625 PF00180 Isocitrate/isopropylmalate dehydrogenase D0853_RS14630 PF00330 Aconitase family (aconitate hydratase) D0853_RS14635 PF00694 Aconitase C-terminal domain D0853_RS14645 PF00226 DnaJ domain D0853_RS14645 PF05099 Tellurite resistance protein TerB D0853_RS14650 PF04453 LPS transport system D D0853_RS14650 PF03968 OstA-like protein D0853_RS14655 PF09312 SurA N-terminal domain D0853_RS14660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D0853_RS14665 PF00398 Ribosomal RNA adenine dimethylase D0853_RS14670 PF04379 ApaG domain D0853_RS14675 PF00149 Calcineurin-like phosphoesterase D0853_RS14680 PF00186 Dihydrofolate reductase D0853_RS14685 PF12821 Threonine/Serine exporter, ThrE D0853_RS14690 PF06738 Putative threonine/serine exporter D0853_RS14695 PF01926 50S ribosome-binding GTPase D0853_RS14695 PF01018 GTP1/OBG D0853_RS14700 PF01016 Ribosomal L27 protein D0853_RS14705 PF00829 Ribosomal prokaryotic L21 protein D0853_RS14710 PF00348 Polyprenyl synthetase D0853_RS14720 PF00056 lactate/malate dehydrogenase, NAD binding domain D0853_RS14720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D0853_RS14725 PF01316 Arginine repressor, DNA binding domain D0853_RS14725 PF02863 Arginine repressor, C-terminal domain D0853_RS14735 PF16868 NMT1-like family D0853_RS14755 PF00005 ABC transporter D0853_RS14760 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS14770 PF02441 Flavoprotein D0853_RS14775 PF01225 Mur ligase family, catalytic domain D0853_RS14775 PF08245 Mur ligase middle domain D0853_RS14775 PF02875 Mur ligase family, glutamate ligase domain D0853_RS14785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D0853_RS14790 PF00719 Inorganic pyrophosphatase D0853_RS14800 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D0853_RS14805 PF04357 TamB, inner membrane protein subunit of TAM complex D0853_RS14810 PF01103 Surface antigen D0853_RS14810 PF17243 POTRA domain TamA domain 1 D0853_RS14815 PF01625 Peptide methionine sulfoxide reductase D0853_RS14820 PF06526 Protein of unknown function (DUF1107) D0853_RS14825 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D0853_RS14830 PF10795 Protein of unknown function (DUF2607) D0853_RS14840 PF00005 ABC transporter D0853_RS14865 PF02080 TrkA-C domain D0853_RS14865 PF03600 Citrate transporter D0853_RS14875 PF00009 Elongation factor Tu GTP binding domain D0853_RS14880 PF01507 Phosphoadenosine phosphosulfate reductase family D0853_RS14885 PF10414 Sirohaem synthase dimerisation region D0853_RS14885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0853_RS14885 PF14824 Sirohaem biosynthesis protein central D0853_RS14890 PF00149 Calcineurin-like phosphoesterase D0853_RS14890 PF02872 5'-nucleotidase, C-terminal domain D0853_RS14900 PF03880 DbpA RNA binding domain D0853_RS14900 PF00270 DEAD/DEAH box helicase D0853_RS14900 PF00271 Helicase conserved C-terminal domain D0853_RS14905 PF13673 Acetyltransferase (GNAT) domain D0853_RS14915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0853_RS14915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0853_RS14925 PF01196 Ribosomal protein L17 D0853_RS14930 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D0853_RS14930 PF01000 RNA polymerase Rpb3/RpoA insert domain D0853_RS14930 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D0853_RS14935 PF01479 S4 domain D0853_RS14935 PF00163 Ribosomal protein S4/S9 N-terminal domain D0853_RS14940 PF00411 Ribosomal protein S11 D0853_RS14945 PF00416 Ribosomal protein S13/S18 D0853_RS14950 PF00444 Ribosomal protein L36 D0853_RS14955 PF00344 SecY translocase D0853_RS14960 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D0853_RS14965 PF00327 Ribosomal protein L30p/L7e D0853_RS14970 PF00333 Ribosomal protein S5, N-terminal domain D0853_RS14970 PF03719 Ribosomal protein S5, C-terminal domain D0853_RS14975 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D0853_RS14980 PF00347 Ribosomal protein L6 D0853_RS14985 PF00410 Ribosomal protein S8 D0853_RS14990 PF00253 Ribosomal protein S14p/S29e D0853_RS14995 PF00281 Ribosomal protein L5 D0853_RS14995 PF00673 ribosomal L5P family C-terminus D0853_RS15000 PF00467 KOW motif D0853_RS15000 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D0853_RS15005 PF00238 Ribosomal protein L14p/L23e D0853_RS15010 PF00366 Ribosomal protein S17 D0853_RS15015 PF00831 Ribosomal L29 protein D0853_RS15020 PF00252 Ribosomal protein L16p/L10e D0853_RS15025 PF00189 Ribosomal protein S3, C-terminal domain D0853_RS15025 PF07650 KH domain D0853_RS15030 PF00237 Ribosomal protein L22p/L17e D0853_RS15035 PF00203 Ribosomal protein S19 D0853_RS15040 PF03947 Ribosomal Proteins L2, C-terminal domain D0853_RS15040 PF00181 Ribosomal Proteins L2, RNA binding domain D0853_RS15045 PF00276 Ribosomal protein L23 D0853_RS15050 PF00573 Ribosomal protein L4/L1 family D0853_RS15055 PF00297 Ribosomal protein L3 D0853_RS15060 PF00338 Ribosomal protein S10p/S20e D0853_RS15065 PF01197 Ribosomal protein L31 D0853_RS15075 PF00271 Helicase conserved C-terminal domain D0853_RS15075 PF17764 3′ DNA-binding domain (3′BD) D0853_RS15075 PF18074 Primosomal protein N C-terminal domain D0853_RS15075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D0853_RS15075 PF00270 DEAD/DEAH box helicase D0853_RS15080 PF00356 Bacterial regulatory proteins, lacI family D0853_RS15090 PF00227 Proteasome subunit D0853_RS15095 PF07724 AAA domain (Cdc48 subfamily) D0853_RS15095 PF00004 ATPase family associated with various cellular activities (AAA) D0853_RS15100 PF01040 UbiA prenyltransferase family D0853_RS15105 PF03737 Aldolase/RraA D0853_RS15110 PF06005 Cell division protein ZapB D0853_RS15120 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D0853_RS15125 PF00455 DeoR C terminal sensor domain D0853_RS15125 PF08220 DeoR-like helix-turn-helix domain D0853_RS15145 PF00121 Triosephosphate isomerase D0853_RS15150 PF10996 Beta-Casp domain D0853_RS15150 PF00753 Metallo-beta-lactamase superfamily D0853_RS15150 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D0853_RS15155 PF00483 Nucleotidyl transferase D0853_RS15160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D0853_RS15160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D0853_RS15160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D0853_RS15165 PF02719 Polysaccharide biosynthesis protein D0853_RS15170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0853_RS15185 PF02397 Bacterial sugar transferase D0853_RS15195 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D0853_RS15225 PF00483 Nucleotidyl transferase D0853_RS15230 PF16363 GDP-mannose 4,6 dehydratase D0853_RS15265 PF06082 Exopolysaccharide biosynthesis protein YbjH D0853_RS15270 PF01370 NAD dependent epimerase/dehydratase family D0853_RS15275 PF03279 Bacterial lipid A biosynthesis acyltransferase D0853_RS15280 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0853_RS15285 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D0853_RS15310 PF00795 Carbon-nitrogen hydrolase D0853_RS15315 PF00202 Aminotransferase class-III D0853_RS15325 PF13472 GDSL-like Lipase/Acylhydrolase family D0853_RS15325 PF02348 Cytidylyltransferase D0853_RS15330 PF00483 Nucleotidyl transferase D0853_RS15340 PF08666 SAF domain D0853_RS15340 PF03102 NeuB family D0853_RS15345 PF02350 UDP-N-acetylglucosamine 2-epimerase D0853_RS15350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D0853_RS15355 PF02719 Polysaccharide biosynthesis protein D0853_RS15365 PF01219 Prokaryotic diacylglycerol kinase D0853_RS15370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D0853_RS15375 PF00535 Glycosyl transferase family 2 D0853_RS15380 PF00535 Glycosyl transferase family 2 D0853_RS15385 PF05686 Glycosyl transferase family 90 D0853_RS15390 PF01467 Cytidylyltransferase-like D0853_RS15395 PF06827 Zinc finger found in FPG and IleRS D0853_RS15395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D0853_RS15395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D0853_RS15405 PF00884 Sulfatase D0853_RS15410 PF00471 Ribosomal protein L33 D0853_RS15415 PF00830 Ribosomal L28 family D0853_RS15420 PF04002 RadC-like JAB domain D0853_RS15425 PF17200 Single Cache domain 2 D0853_RS15425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS15425 PF00672 HAMP domain D0853_RS15435 PF04127 DNA / pantothenate metabolism flavoprotein D0853_RS15435 PF02441 Flavoprotein D0853_RS15440 PF00440 Bacterial regulatory proteins, tetR family D0853_RS15445 PF03279 Bacterial lipid A biosynthesis acyltransferase D0853_RS15450 PF00156 Phosphoribosyl transferase domain D0853_RS15455 PF01138 3' exoribonuclease family, domain 1 D0853_RS15455 PF03725 3' exoribonuclease family, domain 2 D0853_RS15465 PF08340 Domain of unknown function (DUF1732) D0853_RS15465 PF03755 YicC-like family, N-terminal region D0853_RS15475 PF00005 ABC transporter D0853_RS15475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS15480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS15480 PF00005 ABC transporter D0853_RS15485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS15490 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS15490 PF12911 N-terminal TM domain of oligopeptide transport permease C D0853_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS15505 PF00593 TonB dependent receptor D0853_RS15505 PF07715 TonB-dependent Receptor Plug Domain D0853_RS15520 PF01618 MotA/TolQ/ExbB proton channel family D0853_RS15525 PF02472 Biopolymer transport protein ExbD/TolR D0853_RS15540 PF00625 Guanylate kinase D0853_RS15545 PF01192 RNA polymerase Rpb6 D0853_RS15550 PF13291 ACT domain D0853_RS15550 PF02824 TGS domain D0853_RS15550 PF04607 Region found in RelA / SpoT proteins D0853_RS15555 PF00588 SpoU rRNA Methylase family D0853_RS15555 PF12105 SpoU, rRNA methylase, C-terminal D0853_RS15560 PF00270 DEAD/DEAH box helicase D0853_RS15560 PF00271 Helicase conserved C-terminal domain D0853_RS15560 PF17191 RecG wedge domain D0853_RS15570 PF00860 Permease family D0853_RS15575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS15575 PF00672 HAMP domain D0853_RS15575 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS15580 PF00486 Transcriptional regulatory protein, C terminal D0853_RS15580 PF00072 Response regulator receiver domain D0853_RS15590 PF01272 Transcription elongation factor, GreA/GreB, C-term D0853_RS15590 PF03449 Transcription elongation factor, N-terminal D0853_RS15600 PF16921 Tex protein YqgF-like domain D0853_RS15600 PF09371 Tex-like protein N-terminal domain D0853_RS15600 PF00575 S1 RNA binding domain D0853_RS15600 PF17674 HHH domain D0853_RS15610 PF00561 alpha/beta hydrolase fold D0853_RS15615 PF00156 Phosphoribosyl transferase domain D0853_RS15620 PF01521 Iron-sulphur cluster biosynthesis D0853_RS15620 PF01106 NifU-like domain D0853_RS15625 PF00293 NUDIX domain D0853_RS15630 PF00459 Inositol monophosphatase family D0853_RS15635 PF01203 Type II secretion system (T2SS), protein N D0853_RS15640 PF04612 Type II secretion system (T2SS), protein M D0853_RS15645 PF05134 Type II secretion system (T2SS), protein L D0853_RS15645 PF12693 GspL periplasmic domain D0853_RS15650 PF03934 Type II secretion system (T2SS), protein K D0853_RS15655 PF07963 Prokaryotic N-terminal methylation motif D0853_RS15655 PF11612 Type II secretion system (T2SS), protein J D0853_RS15660 PF02501 Type II secretion system (T2SS), protein I D0853_RS15660 PF07963 Prokaryotic N-terminal methylation motif D0853_RS15665 PF12019 Type II transport protein GspH D0853_RS15670 PF08334 Type II secretion system (T2SS), protein G D0853_RS15670 PF07963 Prokaryotic N-terminal methylation motif D0853_RS15675 PF00482 Type II secretion system (T2SS), protein F D0853_RS15680 PF00437 Type II/IV secretion system protein D0853_RS15685 PF03958 Bacterial type II/III secretion system short domain D0853_RS15685 PF00263 Bacterial type II and III secretion system protein D0853_RS15690 PF11356 Type II secretion system protein C D0853_RS15695 PF01479 S4 domain D0853_RS15700 PF01430 Hsp33 protein D0853_RS15705 PF01293 Phosphoenolpyruvate carboxykinase D0853_RS15715 PF00583 Acetyltransferase (GNAT) family D0853_RS15715 PF09500 Putative thioesterase (yiiD_Cterm) D0853_RS15720 PF02580 D-Tyr-tRNA(Tyr) deacylase D0853_RS15725 PF03631 Virulence factor BrkB D0853_RS15740 PF00009 Elongation factor Tu GTP binding domain D0853_RS15740 PF00679 Elongation factor G C-terminus D0853_RS15740 PF03144 Elongation factor Tu domain 2 D0853_RS15745 PF03951 Glutamine synthetase, beta-Grasp domain D0853_RS15745 PF00120 Glutamine synthetase, catalytic domain D0853_RS15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS15755 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS15755 PF00989 PAS fold D0853_RS15760 PF02954 Bacterial regulatory protein, Fis family D0853_RS15760 PF00072 Response regulator receiver domain D0853_RS15760 PF00158 Sigma-54 interaction domain D0853_RS15765 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS15765 PF03707 Bacterial signalling protein N terminal repeat D0853_RS15765 PF00563 EAL domain D0853_RS15770 PF00962 Adenosine/AMP deaminase D0853_RS15775 PF04055 Radical SAM superfamily D0853_RS15775 PF06969 HemN C-terminal domain D0853_RS15780 PF10675 Protein of unknown function (DUF2489) D0853_RS15785 PF04220 Der GTPase activator (YihI) D0853_RS15800 PF00034 Cytochrome c D0853_RS15805 PF01926 50S ribosome-binding GTPase D0853_RS15815 PF01612 3'-5' exonuclease D0853_RS15815 PF00476 DNA polymerase family A D0853_RS15815 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D0853_RS15815 PF01367 5'-3' exonuclease, C-terminal SAM fold D0853_RS15830 PF00490 Delta-aminolevulinic acid dehydratase D0853_RS15840 PF01026 TatD related DNase D0853_RS15850 PF00902 Sec-independent protein translocase protein (TatC) D0853_RS15855 PF02416 mttA/Hcf106 family D0853_RS15860 PF02416 mttA/Hcf106 family D0853_RS15865 PF03109 ABC1 family D0853_RS15870 PF02036 SCP-2 sterol transfer family D0853_RS15875 PF01209 ubiE/COQ5 methyltransferase family D0853_RS15880 PF02646 RmuC family D0853_RS15890 PF03707 Bacterial signalling protein N terminal repeat D0853_RS15890 PF00563 EAL domain D0853_RS15890 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS15895 PF01594 AI-2E family transporter D0853_RS15925 PF00781 Diacylglycerol kinase catalytic domain D0853_RS15950 PF00158 Sigma-54 interaction domain D0853_RS15950 PF02954 Bacterial regulatory protein, Fis family D0853_RS15950 PF01590 GAF domain D0853_RS15960 PF10625 Universal stress protein B (UspB) D0853_RS15965 PF00210 Ferritin-like domain D0853_RS15970 PF00582 Universal stress protein family D0853_RS15975 PF00892 EamA-like transporter family D0853_RS15985 PF04445 Putative SAM-dependent methyltransferase D0853_RS15990 PF08448 PAS fold D0853_RS15990 PF00563 EAL domain D0853_RS15990 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS15995 PF01037 Lrp/AsnC ligand binding domain D0853_RS16000 PF01432 Peptidase family M3 D0853_RS16010 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D0853_RS16015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0853_RS16015 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS16020 PF03466 LysR substrate binding domain D0853_RS16020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16025 PF01048 Phosphorylase superfamily D0853_RS16030 PF01081 KDPG and KHG aldolase D0853_RS16035 PF02447 GntP family permease D0853_RS16040 PF01202 Shikimate kinase D0853_RS16045 PF00920 Dehydratase family D0853_RS16050 PF00893 Small Multidrug Resistance protein D0853_RS16055 PF00893 Small Multidrug Resistance protein D0853_RS16060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16060 PF03466 LysR substrate binding domain D0853_RS16065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0853_RS16065 PF00356 Bacterial regulatory proteins, lacI family D0853_RS16070 PF00069 Protein kinase domain D0853_RS16105 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS16105 PF12911 N-terminal TM domain of oligopeptide transport permease C D0853_RS16110 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS16115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS16120 PF00005 ABC transporter D0853_RS16120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS16135 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS16170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D0853_RS16175 PF13361 UvrD-like helicase C-terminal domain D0853_RS16175 PF00580 UvrD/REP helicase N-terminal domain D0853_RS16180 PF16295 Tetracyclin repressor-like, C-terminal domain D0853_RS16180 PF00440 Bacterial regulatory proteins, tetR family D0853_RS16185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS16190 PF00873 AcrB/AcrD/AcrF family D0853_RS16200 PF04380 Membrane fusogenic activity D0853_RS16205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D0853_RS16205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D0853_RS16210 PF03466 LysR substrate binding domain D0853_RS16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16255 PF00132 Bacterial transferase hexapeptide (six repeats) D0853_RS16260 PF07369 Protein of unknown function (DUF1488) D0853_RS16265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D0853_RS16265 PF01488 Shikimate / quinate 5-dehydrogenase D0853_RS16265 PF08501 Shikimate dehydrogenase substrate binding domain D0853_RS16270 PF01218 Coproporphyrinogen III oxidase D0853_RS16275 PF01300 Telomere recombination D0853_RS16280 PF00731 AIR carboxylase D0853_RS16285 PF02222 ATP-grasp domain D0853_RS16285 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D0853_RS16290 PF01396 Topoisomerase DNA binding C4 zinc finger D0853_RS16295 PF04361 Protein of unknown function (DUF494) D0853_RS16300 PF17782 DprA winged helix domain D0853_RS16300 PF02481 DNA recombination-mediator protein A D0853_RS16310 PF01327 Polypeptide deformylase D0853_RS16315 PF02911 Formyl transferase, C-terminal domain D0853_RS16315 PF00551 Formyl transferase D0853_RS16320 PF01189 16S rRNA methyltransferase RsmB/F D0853_RS16320 PF01029 NusB family D0853_RS16325 PF02080 TrkA-C domain D0853_RS16325 PF02254 TrkA-N domain D0853_RS16330 PF02386 Cation transport protein D0853_RS16340 PF03006 Haemolysin-III related D0853_RS16345 PF07070 SpoOM protein D0853_RS16355 PF06288 Protein of unknown function (DUF1040) D0853_RS16360 PF13746 4Fe-4S dicluster domain D0853_RS16360 PF12801 4Fe-4S binding domain D0853_RS16360 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D0853_RS16365 PF01636 Phosphotransferase enzyme family D0853_RS16370 PF01323 DSBA-like thioredoxin domain D0853_RS16375 PF01553 Acyltransferase D0853_RS16385 PF13335 Magnesium chelatase, subunit ChlI C-terminal D0853_RS16385 PF01078 Magnesium chelatase, subunit ChlI D0853_RS16390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D0853_RS16390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D0853_RS16390 PF00205 Thiamine pyrophosphate enzyme, central domain D0853_RS16400 PF01063 Amino-transferase class IV D0853_RS16405 PF00920 Dehydratase family D0853_RS16410 PF00291 Pyridoxal-phosphate dependent enzyme D0853_RS16410 PF00585 C-terminal regulatory domain of Threonine dehydratase D0853_RS16415 PF03466 LysR substrate binding domain D0853_RS16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16420 PF07690 Major Facilitator Superfamily D0853_RS16425 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS16430 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS16435 PF12804 MobA-like NTP transferase domain D0853_RS16435 PF00132 Bacterial transferase hexapeptide (six repeats) D0853_RS16440 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D0853_RS16440 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D0853_RS16445 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0853_RS16445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0853_RS16450 PF00231 ATP synthase D0853_RS16455 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0853_RS16455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0853_RS16455 PF00306 ATP synthase alpha/beta chain, C terminal domain D0853_RS16460 PF00213 ATP synthase delta (OSCP) subunit D0853_RS16465 PF00430 ATP synthase B/B' CF(0) D0853_RS16470 PF00137 ATP synthase subunit C D0853_RS16475 PF00119 ATP synthase A chain D0853_RS16480 PF03899 ATP synthase I chain D0853_RS16485 PF17762 HTH domain found in ParB protein D0853_RS16485 PF02195 ParB-like nuclease domain D0853_RS16490 PF13614 AAA domain D0853_RS16495 PF02527 rRNA small subunit methyltransferase G D0853_RS16500 PF01134 Glucose inhibited division protein A D0853_RS16500 PF13932 GidA associated domain D0853_RS16505 PF00258 Flavodoxin D0853_RS16510 PF01926 50S ribosome-binding GTPase D0853_RS16510 PF10396 GTP-binding protein TrmE N-terminus D0853_RS16510 PF12631 MnmE helical domain D0853_RS16515 PF14849 YidC periplasmic domain D0853_RS16515 PF02096 60Kd inner membrane protein D0853_RS16520 PF01809 Putative membrane protein insertion efficiency factor D0853_RS16525 PF00825 Ribonuclease P D0853_RS16530 PF00468 Ribosomal protein L34 D0853_RS16535 PF00005 ABC transporter D0853_RS16540 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS16545 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS16570 PF00857 Isochorismatase family D0853_RS16580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D0853_RS16580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D0853_RS16610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16610 PF03466 LysR substrate binding domain D0853_RS16615 PF01389 OmpA-like transmembrane domain D0853_RS16615 PF00691 OmpA family D0853_RS16625 PF06629 MltA-interacting protein MipA D0853_RS16635 PF04170 NlpE N-terminal domain D0853_RS16635 PF17185 NlpE C-terminal OB domain D0853_RS16645 PF02001 Protein of unknown function DUF134 D0853_RS16670 PF00679 Elongation factor G C-terminus D0853_RS16670 PF03144 Elongation factor Tu domain 2 D0853_RS16670 PF00009 Elongation factor Tu GTP binding domain D0853_RS16670 PF03764 Elongation factor G, domain IV D0853_RS16670 PF14492 Elongation Factor G, domain II D0853_RS16680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D0853_RS16680 PF13378 Enolase C-terminal domain-like D0853_RS16690 PF03466 LysR substrate binding domain D0853_RS16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16710 PF09278 MerR, DNA binding D0853_RS16710 PF00376 MerR family regulatory protein D0853_RS16740 PF13091 PLD-like domain D0853_RS16750 PF13533 Biotin-lipoyl like D0853_RS16755 PF00873 AcrB/AcrD/AcrF family D0853_RS16785 PF08402 TOBE domain D0853_RS16785 PF00005 ABC transporter D0853_RS16810 PF07702 UTRA domain D0853_RS16810 PF00392 Bacterial regulatory proteins, gntR family D0853_RS16815 PF02028 BCCT, betaine/carnitine/choline family transporter D0853_RS16820 PF00703 Glycosyl hydrolases family 2 D0853_RS16820 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 D0853_RS16820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D0853_RS16820 PF02837 Glycosyl hydrolases family 2, sugar binding domain D0853_RS16825 PF00196 Bacterial regulatory proteins, luxR family D0853_RS16835 PF07694 5TMR of 5TMR-LYT D0853_RS16835 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS16850 PF00873 AcrB/AcrD/AcrF family D0853_RS16855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS16860 PF03466 LysR substrate binding domain D0853_RS16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16870 PF13416 Bacterial extracellular solute-binding protein D0853_RS16875 PF00579 tRNA synthetases class I (W and Y) D0853_RS16895 PF00391 PEP-utilising enzyme, mobile domain D0853_RS16895 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D0853_RS16895 PF02896 PEP-utilising enzyme, TIM barrel domain D0853_RS16900 PF03618 Kinase/pyrophosphorylase D0853_RS16905 PF00710 Asparaginase, N-terminal D0853_RS16905 PF17763 Glutaminase/Asparaginase C-terminal domain D0853_RS16910 PF00709 Adenylosuccinate synthetase D0853_RS16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16915 PF03466 LysR substrate binding domain D0853_RS16930 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D0853_RS16940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0853_RS16940 PF12833 Helix-turn-helix domain D0853_RS16955 PF08240 Alcohol dehydrogenase GroES-like domain D0853_RS16955 PF00107 Zinc-binding dehydrogenase D0853_RS16960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0853_RS16970 PF03466 LysR substrate binding domain D0853_RS16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS16975 PF03466 LysR substrate binding domain D0853_RS16985 PF00271 Helicase conserved C-terminal domain D0853_RS16985 PF00270 DEAD/DEAH box helicase D0853_RS17000 PF00535 Glycosyl transferase family 2 D0853_RS17030 PF00155 Aminotransferase class I and II D0853_RS17035 PF01497 Periplasmic binding protein D0853_RS17035 PF12833 Helix-turn-helix domain D0853_RS17065 PF05661 Protein of unknown function (DUF808) D0853_RS17070 PF01979 Amidohydrolase family D0853_RS17080 PF01679 Proteolipid membrane potential modulator D0853_RS17090 PF00111 2Fe-2S iron-sulfur cluster binding domain D0853_RS17090 PF03473 MOSC domain D0853_RS17090 PF03473 MOSC domain D0853_RS17090 PF03476 MOSC N-terminal beta barrel domain D0853_RS17090 PF03476 MOSC N-terminal beta barrel domain D0853_RS17090 PF00111 2Fe-2S iron-sulfur cluster binding domain D0853_RS17095 PF02540 NAD synthase D0853_RS17100 PF01467 Cytidylyltransferase-like D0853_RS17145 PF00005 ABC transporter D0853_RS17150 PF01032 FecCD transport family D0853_RS17160 PF02472 Biopolymer transport protein ExbD/TolR D0853_RS17165 PF01618 MotA/TolQ/ExbB proton channel family D0853_RS17170 PF03544 Gram-negative bacterial TonB protein C-terminal D0853_RS17175 PF04055 Radical SAM superfamily D0853_RS17180 PF06228 Haem utilisation ChuX/HutX D0853_RS17185 PF01243 Pyridoxamine 5'-phosphate oxidase D0853_RS17195 PF01584 CheW-like domain D0853_RS17195 PF00072 Response regulator receiver domain D0853_RS17210 PF07508 Recombinase D0853_RS17210 PF13408 Recombinase zinc beta ribbon domain D0853_RS17210 PF00239 Resolvase, N terminal domain D0853_RS17220 PF02796 Helix-turn-helix domain of resolvase D0853_RS17220 PF00239 Resolvase, N terminal domain D0853_RS17240 PF00075 RNase H D0853_RS17295 PF00082 Subtilase family D0853_RS17315 PF00141 Peroxidase D0853_RS17320 PF00210 Ferritin-like domain D0853_RS17330 PF03466 LysR substrate binding domain D0853_RS17330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS17345 PF08453 Peptidase family M9 N-terminal D0853_RS17345 PF01752 Collagenase D0853_RS17345 PF04151 Bacterial pre-peptidase C-terminal domain D0853_RS17355 PF00128 Alpha amylase, catalytic domain D0853_RS17370 PF02254 TrkA-N domain D0853_RS17370 PF00999 Sodium/hydrogen exchanger family D0853_RS17375 PF02525 Flavodoxin-like fold D0853_RS17380 PF00582 Universal stress protein family D0853_RS17385 PF16326 ABC transporter C-terminal domain D0853_RS17385 PF12848 ABC transporter D0853_RS17385 PF00005 ABC transporter D0853_RS17390 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0853_RS17390 PF00326 Prolyl oligopeptidase family D0853_RS17400 PF13533 Biotin-lipoyl like D0853_RS17405 PF00873 AcrB/AcrD/AcrF family D0853_RS17410 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0853_RS17420 PF13302 Acetyltransferase (GNAT) domain D0853_RS17430 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS17450 PF00873 AcrB/AcrD/AcrF family D0853_RS17475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D0853_RS17475 PF01568 Molydopterin dinucleotide binding domain D0853_RS17475 PF12838 4Fe-4S dicluster domain D0853_RS17475 PF00384 Molybdopterin oxidoreductase D0853_RS17475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0853_RS17495 PF00005 ABC transporter D0853_RS17505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS17505 PF00672 HAMP domain D0853_RS17515 PF10282 Lactonase, 7-bladed beta-propeller D0853_RS17520 PF02567 Phenazine biosynthesis-like protein D0853_RS17525 PF01161 Phosphatidylethanolamine-binding protein D0853_RS17535 PF01758 Sodium Bile acid symporter family D0853_RS17555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0853_RS17560 PF02378 Phosphotransferase system, EIIC D0853_RS17560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0853_RS17565 PF00107 Zinc-binding dehydrogenase D0853_RS17565 PF08240 Alcohol dehydrogenase GroES-like domain D0853_RS17600 PF03222 Tryptophan/tyrosine permease family D0853_RS17610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS17610 PF00672 HAMP domain D0853_RS17610 PF02743 Cache domain D0853_RS17615 PF07670 Nucleoside recognition D0853_RS17640 PF01476 LysM domain D0853_RS17640 PF08525 Opacity-associated protein A N-terminal motif D0853_RS17640 PF01551 Peptidase family M23 D0853_RS17645 PF08447 PAS fold D0853_RS17645 PF08448 PAS fold D0853_RS17645 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS17645 PF00563 EAL domain D0853_RS17650 PF03466 LysR substrate binding domain D0853_RS17650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS17655 PF07690 Major Facilitator Superfamily D0853_RS17680 PF00892 EamA-like transporter family D0853_RS17685 PF00267 Gram-negative porin D0853_RS17695 PF01557 Fumarylacetoacetate (FAA) hydrolase family D0853_RS17710 PF12833 Helix-turn-helix domain D0853_RS17715 PF01810 LysE type translocator D0853_RS17725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D0853_RS17725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D0853_RS17725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D0853_RS17725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D0853_RS17730 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0853_RS17730 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D0853_RS17735 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0853_RS17740 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D0853_RS17745 PF00510 Cytochrome c oxidase subunit III D0853_RS17765 PF02628 Cytochrome oxidase assembly protein D0853_RS17770 PF01040 UbiA prenyltransferase family D0853_RS17775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D0853_RS17775 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D0853_RS17810 PF00313 'Cold-shock' DNA-binding domain D0853_RS17815 PF03889 Alternative ribosome-rescue factor A D0853_RS17820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS17820 PF08447 PAS fold D0853_RS17820 PF13426 PAS domain D0853_RS17830 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS17845 PF00005 ABC transporter D0853_RS17845 PF02687 FtsX-like permease family D0853_RS17845 PF12704 MacB-like periplasmic core domain D0853_RS17850 PF12704 MacB-like periplasmic core domain D0853_RS17850 PF02687 FtsX-like permease family D0853_RS17850 PF00005 ABC transporter D0853_RS17860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS17860 PF00672 HAMP domain D0853_RS17860 PF17200 Single Cache domain 2 D0853_RS17870 PF00210 Ferritin-like domain D0853_RS17880 PF07995 Glucose / Sorbosone dehydrogenase D0853_RS17885 PF00465 Iron-containing alcohol dehydrogenase D0853_RS17900 PF00892 EamA-like transporter family D0853_RS17925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS17925 PF03466 LysR substrate binding domain D0853_RS17935 PF00501 AMP-binding enzyme D0853_RS17935 PF13193 AMP-binding enzyme C-terminal domain D0853_RS17940 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D0853_RS17945 PF01329 Pterin 4 alpha carbinolamine dehydratase D0853_RS17970 PF12843 Putative quorum-sensing-regulated virulence factor D0853_RS17975 PF00271 Helicase conserved C-terminal domain D0853_RS17975 PF00270 DEAD/DEAH box helicase D0853_RS17980 PF09905 DNA-binding protein VF530 D0853_RS17985 PF00291 Pyridoxal-phosphate dependent enzyme D0853_RS17995 PF01470 Pyroglutamyl peptidase D0853_RS18005 PF02492 CobW/HypB/UreG, nucleotide-binding domain D0853_RS18005 PF07683 Cobalamin synthesis protein cobW C-terminal domain D0853_RS18010 PF00271 Helicase conserved C-terminal domain D0853_RS18010 PF00270 DEAD/DEAH box helicase D0853_RS18030 PF00563 EAL domain D0853_RS18030 PF12792 CSS motif domain associated with EAL D0853_RS18035 PF00005 ABC transporter D0853_RS18040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS18040 PF12729 Four helix bundle sensory module for signal transduction D0853_RS18040 PF00672 HAMP domain D0853_RS18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS18055 PF03466 LysR substrate binding domain D0853_RS18060 PF00884 Sulfatase D0853_RS18065 PF13186 Iron-sulfur cluster-binding domain D0853_RS18065 PF04055 Radical SAM superfamily D0853_RS18070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS18070 PF03466 LysR substrate binding domain D0853_RS18080 PF01575 MaoC like domain D0853_RS18085 PF12849 PBP superfamily domain D0853_RS18095 PF12833 Helix-turn-helix domain D0853_RS18100 PF00773 RNB domain D0853_RS18100 PF00575 S1 RNA binding domain D0853_RS18100 PF08206 Ribonuclease B OB domain D0853_RS18105 PF00271 Helicase conserved C-terminal domain D0853_RS18105 PF00270 DEAD/DEAH box helicase D0853_RS18105 PF03880 DbpA RNA binding domain D0853_RS18110 PF00563 EAL domain D0853_RS18110 PF13426 PAS domain D0853_RS18110 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS18120 PF00871 Acetokinase family D0853_RS18125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS18125 PF13426 PAS domain D0853_RS18125 PF08447 PAS fold D0853_RS18135 PF10063 Uncharacterized integral membrane protein (DUF2301) D0853_RS18140 PF00682 HMGL-like D0853_RS18145 PF00378 Enoyl-CoA hydratase/isomerase D0853_RS18150 PF01039 Carboxyl transferase domain D0853_RS18155 PF02770 Acyl-CoA dehydrogenase, middle domain D0853_RS18155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0853_RS18155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0853_RS18160 PF09278 MerR, DNA binding D0853_RS18160 PF00376 MerR family regulatory protein D0853_RS18165 PF02803 Thiolase, C-terminal domain D0853_RS18165 PF00108 Thiolase, N-terminal domain D0853_RS18170 PF00171 Aldehyde dehydrogenase family D0853_RS18175 PF02770 Acyl-CoA dehydrogenase, middle domain D0853_RS18175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0853_RS18175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0853_RS18180 PF00378 Enoyl-CoA hydratase/isomerase D0853_RS18185 PF00378 Enoyl-CoA hydratase/isomerase D0853_RS18190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0853_RS18190 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0853_RS18200 PF06481 COX Aromatic Rich Motif D0853_RS18200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D0853_RS18205 PF00115 Cytochrome C and Quinol oxidase polypeptide I D0853_RS18210 PF00510 Cytochrome c oxidase subunit III D0853_RS18220 PF01040 UbiA prenyltransferase family D0853_RS18235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0853_RS18240 PF08031 Berberine and berberine like D0853_RS18240 PF01565 FAD binding domain D0853_RS18245 PF00005 ABC transporter D0853_RS18250 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS18255 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS18260 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS18270 PF03466 LysR substrate binding domain D0853_RS18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS18275 PF00043 Glutathione S-transferase, C-terminal domain D0853_RS18275 PF02798 Glutathione S-transferase, N-terminal domain D0853_RS18290 PF00364 Biotin-requiring enzyme D0853_RS18290 PF02817 e3 binding domain D0853_RS18290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D0853_RS18295 PF02780 Transketolase, C-terminal domain D0853_RS18295 PF02779 Transketolase, pyrimidine binding domain D0853_RS18300 PF00676 Dehydrogenase E1 component D0853_RS18315 PF00012 Hsp70 protein D0853_RS18320 PF04314 Copper chaperone PCu(A)C D0853_RS18345 PF01497 Periplasmic binding protein D0853_RS18350 PF01032 FecCD transport family D0853_RS18355 PF01032 FecCD transport family D0853_RS18360 PF00005 ABC transporter D0853_RS18365 PF13411 MerR HTH family regulatory protein D0853_RS18380 PF00593 TonB dependent receptor D0853_RS18380 PF07715 TonB-dependent Receptor Plug Domain D0853_RS18415 PF12805 FUSC-like inner membrane protein yccS D0853_RS18420 PF00580 UvrD/REP helicase N-terminal domain D0853_RS18420 PF12462 DNA helicase IV / RNA helicase N terminal D0853_RS18420 PF13361 UvrD-like helicase C-terminal domain D0853_RS18425 PF02142 MGS-like domain D0853_RS18430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0853_RS18435 PF00672 HAMP domain D0853_RS18435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS18435 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS18435 PF01627 Hpt domain D0853_RS18435 PF00072 Response regulator receiver domain D0853_RS18450 PF00486 Transcriptional regulatory protein, C terminal D0853_RS18450 PF00072 Response regulator receiver domain D0853_RS18455 PF16385 Domain of unknown function D0853_RS18455 PF00884 Sulfatase D0853_RS18460 PF00884 Sulfatase D0853_RS18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS18470 PF03466 LysR substrate binding domain D0853_RS18475 PF00884 Sulfatase D0853_RS18480 PF13186 Iron-sulfur cluster-binding domain D0853_RS18480 PF04055 Radical SAM superfamily D0853_RS18485 PF07726 ATPase family associated with various cellular activities (AAA) D0853_RS18485 PF17863 AAA lid domain D0853_RS18500 PF00092 von Willebrand factor type A domain D0853_RS18515 PF01872 RibD C-terminal domain D0853_RS18515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0853_RS18520 PF03466 LysR substrate binding domain D0853_RS18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS18525 PF00781 Diacylglycerol kinase catalytic domain D0853_RS18530 PF04076 Bacterial OB fold (BOF) protein D0853_RS18550 PF13186 Iron-sulfur cluster-binding domain D0853_RS18550 PF04055 Radical SAM superfamily D0853_RS18560 PF08774 VRR-NUC domain D0853_RS18560 PF18081 Fanconi anemia-associated nuclease SAP domain D0853_RS18580 PF01435 Peptidase family M48 D0853_RS18585 PF04011 LemA family D0853_RS18590 PF03606 C4-dicarboxylate anaerobic carrier D0853_RS18600 PF00583 Acetyltransferase (GNAT) family D0853_RS18600 PF00814 Glycoprotease family D0853_RS18610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS18610 PF00072 Response regulator receiver domain D0853_RS18615 PF00155 Aminotransferase class I and II D0853_RS18620 PF01926 50S ribosome-binding GTPase D0853_RS18630 PF04151 Bacterial pre-peptidase C-terminal domain D0853_RS18630 PF01752 Collagenase D0853_RS18630 PF08453 Peptidase family M9 N-terminal D0853_RS18640 PF12833 Helix-turn-helix domain D0853_RS18645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS18645 PF03466 LysR substrate binding domain D0853_RS18665 PF00263 Bacterial type II and III secretion system protein D0853_RS18665 PF04972 BON domain D0853_RS18665 PF13629 Pilus formation protein N terminal region D0853_RS18680 PF00437 Type II/IV secretion system protein D0853_RS18715 PF00691 OmpA family D0853_RS18715 PF05736 OprF membrane domain D0853_RS18725 PF03466 LysR substrate binding domain D0853_RS18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS18730 PF03466 LysR substrate binding domain D0853_RS18730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS18740 PF09456 RcsC Alpha-Beta-Loop (ABL) D0853_RS18740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS18740 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS18740 PF00072 Response regulator receiver domain D0853_RS18745 PF00563 EAL domain D0853_RS18745 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS18745 PF03707 Bacterial signalling protein N terminal repeat D0853_RS18745 PF13188 PAS domain D0853_RS18750 PF00196 Bacterial regulatory proteins, luxR family D0853_RS18750 PF00072 Response regulator receiver domain D0853_RS18755 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS18765 PF00072 Response regulator receiver domain D0853_RS18765 PF00196 Bacterial regulatory proteins, luxR family D0853_RS18790 PF00072 Response regulator receiver domain D0853_RS18790 PF01584 CheW-like domain D0853_RS18795 PF07963 Prokaryotic N-terminal methylation motif D0853_RS18810 PF00892 EamA-like transporter family D0853_RS18825 PF01569 PAP2 superfamily D0853_RS18835 PF02868 Thermolysin metallopeptidase, alpha-helical domain D0853_RS18835 PF01447 Thermolysin metallopeptidase, catalytic domain D0853_RS18835 PF03413 Peptidase propeptide and YPEB domain D0853_RS18835 PF07504 Fungalysin/Thermolysin Propeptide Motif D0853_RS18835 PF04151 Bacterial pre-peptidase C-terminal domain D0853_RS18840 PF00893 Small Multidrug Resistance protein D0853_RS18845 PF00892 EamA-like transporter family D0853_RS18865 PF00171 Aldehyde dehydrogenase family D0853_RS18870 PF00939 Sodium:sulfate symporter transmembrane region D0853_RS18875 PF17203 Single cache domain 3 D0853_RS18875 PF00989 PAS fold D0853_RS18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS18875 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain D0853_RS18880 PF12431 Transcriptional regulator D0853_RS18880 PF00072 Response regulator receiver domain D0853_RS18890 PF01645 Conserved region in glutamate synthase D0853_RS18890 PF13187 4Fe-4S dicluster domain D0853_RS18900 PF00141 Peroxidase D0853_RS18905 PF09722 Protein of unknown function (DUF2384) D0853_RS18915 PF01757 Acyltransferase family D0853_RS18925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D0853_RS18930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0853_RS18950 PF01769 Divalent cation transporter D0853_RS18950 PF03448 MgtE intracellular N domain D0853_RS18950 PF00571 CBS domain D0853_RS18980 PF01327 Polypeptide deformylase D0853_RS18985 PF00376 MerR family regulatory protein D0853_RS18985 PF09278 MerR, DNA binding D0853_RS19000 PF02253 Phospholipase A1 D0853_RS19020 PF00005 ABC transporter D0853_RS19020 PF00664 ABC transporter transmembrane region D0853_RS19025 PF07733 Bacterial DNA polymerase III alpha NTPase domain D0853_RS19025 PF11490 DNA polymerase III polC-type N-terminus II D0853_RS19025 PF02811 PHP domain D0853_RS19025 PF14579 Helix-hairpin-helix motif D0853_RS19025 PF00929 Exonuclease D0853_RS19025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D0853_RS19030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS19030 PF03466 LysR substrate binding domain D0853_RS19035 PF01039 Carboxyl transferase domain D0853_RS19035 PF17848 Acetyl-coA carboxylase zinc finger domain D0853_RS19040 PF01212 Beta-eliminating lyase D0853_RS19065 PF02347 Glycine cleavage system P-protein D0853_RS19070 PF01597 Glycine cleavage H-protein D0853_RS19075 PF00464 Serine hydroxymethyltransferase D0853_RS19085 PF08669 Glycine cleavage T-protein C-terminal barrel domain D0853_RS19085 PF01571 Aminomethyltransferase folate-binding domain D0853_RS19095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS19105 PF00873 AcrB/AcrD/AcrF family D0853_RS19115 PF02378 Phosphotransferase system, EIIC D0853_RS19115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0853_RS19120 PF00294 pfkB family carbohydrate kinase D0853_RS19125 PF00381 PTS HPr component phosphorylation site D0853_RS19125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0853_RS19130 PF00356 Bacterial regulatory proteins, lacI family D0853_RS19130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0853_RS19150 PF00989 PAS fold D0853_RS19150 PF00563 EAL domain D0853_RS19150 PF01590 GAF domain D0853_RS19150 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS19155 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS19160 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS19165 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS19170 PF00005 ABC transporter D0853_RS19175 PF00224 Pyruvate kinase, barrel domain D0853_RS19175 PF02887 Pyruvate kinase, alpha/beta domain D0853_RS19180 PF07690 Major Facilitator Superfamily D0853_RS19190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS19190 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS19190 PF00672 HAMP domain D0853_RS19195 PF02954 Bacterial regulatory protein, Fis family D0853_RS19195 PF00072 Response regulator receiver domain D0853_RS19195 PF14532 Sigma-54 interaction domain D0853_RS19205 PF00465 Iron-containing alcohol dehydrogenase D0853_RS19210 PF12833 Helix-turn-helix domain D0853_RS19210 PF06719 AraC-type transcriptional regulator N-terminus D0853_RS19220 PF00704 Glycosyl hydrolases family 18 D0853_RS19220 PF06483 Chitinase C D0853_RS19225 PF00483 Nucleotidyl transferase D0853_RS19230 PF01268 Formate--tetrahydrofolate ligase D0853_RS19235 PF00294 pfkB family carbohydrate kinase D0853_RS19255 PF11849 Domain of unknown function (DUF3369) D0853_RS19265 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS19275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS19285 PF04336 Acyl carrier protein phosphodiesterase D0853_RS19290 PF00270 DEAD/DEAH box helicase D0853_RS19290 PF00271 Helicase conserved C-terminal domain D0853_RS19295 PF12792 CSS motif domain associated with EAL D0853_RS19295 PF00563 EAL domain D0853_RS19310 PF01292 Prokaryotic cytochrome b561 D0853_RS19315 PF04264 YceI-like domain D0853_RS19320 PF01226 Formate/nitrite transporter D0853_RS19325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS19325 PF03466 LysR substrate binding domain D0853_RS19330 PF06496 Protein of unknown function (DUF1097) D0853_RS19335 PF11398 Protein of unknown function (DUF2813) D0853_RS19340 PF02872 5'-nucleotidase, C-terminal domain D0853_RS19340 PF00149 Calcineurin-like phosphoesterase D0853_RS19345 PF03741 Integral membrane protein TerC family D0853_RS19360 PF12262 Bacterial virulence factor lipase N-terminal D0853_RS19365 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0853_RS19380 PF03061 Thioesterase superfamily D0853_RS19390 PF12793 Sugar transport-related sRNA regulator N-term D0853_RS19390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS19415 PF00684 DnaJ central domain D0853_RS19415 PF01556 DnaJ C terminal domain D0853_RS19415 PF00226 DnaJ domain D0853_RS19425 PF13188 PAS domain D0853_RS19425 PF03707 Bacterial signalling protein N terminal repeat D0853_RS19425 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS19425 PF00563 EAL domain D0853_RS19430 PF07055 Enoyl reductase FAD binding domain D0853_RS19430 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D0853_RS19430 PF12241 Trans-2-enoyl-CoA reductase catalytic region D0853_RS19435 PF13472 GDSL-like Lipase/Acylhydrolase family D0853_RS19440 PF00005 ABC transporter D0853_RS19450 PF01266 FAD dependent oxidoreductase D0853_RS19450 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D0853_RS19455 PF02626 Carboxyltransferase domain, subdomain A and B D0853_RS19460 PF02682 Carboxyltransferase domain, subdomain C and D D0853_RS19465 PF03746 LamB/YcsF family D0853_RS19470 PF00563 EAL domain D0853_RS19470 PF05231 MASE1 D0853_RS19470 PF08447 PAS fold D0853_RS19470 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS19470 PF13426 PAS domain D0853_RS19470 PF08448 PAS fold D0853_RS19475 PF16363 GDP-mannose 4,6 dehydratase D0853_RS19485 PF07715 TonB-dependent Receptor Plug Domain D0853_RS19485 PF00593 TonB dependent receptor D0853_RS19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS19490 PF03466 LysR substrate binding domain D0853_RS19495 PF13607 Succinyl-CoA ligase like flavodoxin domain D0853_RS19495 PF00583 Acetyltransferase (GNAT) family D0853_RS19495 PF13380 CoA binding domain D0853_RS19505 PF07478 D-ala D-ala ligase C-terminus D0853_RS19505 PF01820 D-ala D-ala ligase N-terminus D0853_RS19515 PF01253 Translation initiation factor SUI1 D0853_RS19625 PF05840 Bacteriophage replication gene A protein (GPA) D0853_RS19660 PF03466 LysR substrate binding domain D0853_RS19660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS19670 PF00582 Universal stress protein family D0853_RS19675 PF03701 Uncharacterised protein family (UPF0181) D0853_RS19690 PF00486 Transcriptional regulatory protein, C terminal D0853_RS19690 PF00072 Response regulator receiver domain D0853_RS19700 PF02233 NAD(P) transhydrogenase beta subunit D0853_RS19705 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D0853_RS19705 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D0853_RS19705 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D0853_RS19720 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS19730 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS19730 PF00360 Phytochrome region D0853_RS19730 PF01590 GAF domain D0853_RS19730 PF00563 EAL domain D0853_RS19740 PF00005 ABC transporter D0853_RS19740 PF03459 TOBE domain D0853_RS19745 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS19755 PF07685 CobB/CobQ-like glutamine amidotransferase domain D0853_RS19760 PF04076 Bacterial OB fold (BOF) protein D0853_RS19770 PF08443 RimK-like ATP-grasp domain D0853_RS19770 PF18030 RimK PreATP-grasp domain D0853_RS19775 PF00155 Aminotransferase class I and II D0853_RS19780 PF12833 Helix-turn-helix domain D0853_RS19790 PF01554 MatE D0853_RS19800 PF13597 Anaerobic ribonucleoside-triphosphate reductase D0853_RS19800 PF03477 ATP cone domain D0853_RS19810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS19815 PF00873 AcrB/AcrD/AcrF family D0853_RS19825 PF04143 Sulphur transport D0853_RS19840 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS19840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D0853_RS19870 PF00691 OmpA family D0853_RS19870 PF01389 OmpA-like transmembrane domain D0853_RS19895 PF00384 Molybdopterin oxidoreductase D0853_RS19905 PF03466 LysR substrate binding domain D0853_RS19905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS19910 PF02634 FdhD/NarQ family D0853_RS19915 PF07690 Major Facilitator Superfamily D0853_RS19920 PF00072 Response regulator receiver domain D0853_RS19920 PF00196 Bacterial regulatory proteins, luxR family D0853_RS19925 PF07730 Histidine kinase D0853_RS19925 PF05231 MASE1 D0853_RS19925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS19930 PF07690 Major Facilitator Superfamily D0853_RS19935 PF01238 Phosphomannose isomerase type I D0853_RS19955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D0853_RS19955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D0853_RS19960 PF00085 Thioredoxin D0853_RS19965 PF07690 Major Facilitator Superfamily D0853_RS19970 PF07495 Y_Y_Y domain D0853_RS19970 PF07494 Two component regulator propeller D0853_RS19970 PF00072 Response regulator receiver domain D0853_RS19970 PF12833 Helix-turn-helix domain D0853_RS19970 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS19970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS19975 PF01554 MatE D0853_RS19980 PF11756 Nitrous oxide-stimulated promoter D0853_RS19995 PF00593 TonB dependent receptor D0853_RS19995 PF07715 TonB-dependent Receptor Plug Domain D0853_RS20010 PF03605 Anaerobic c4-dicarboxylate membrane transporter D0853_RS20025 PF14824 Sirohaem biosynthesis protein central D0853_RS20025 PF10414 Sirohaem synthase dimerisation region D0853_RS20025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0853_RS20030 PF01226 Formate/nitrite transporter D0853_RS20035 PF13806 Rieske-like [2Fe-2S] domain D0853_RS20040 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0853_RS20040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0853_RS20040 PF04324 BFD-like [2Fe-2S] binding domain D0853_RS20040 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS20040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0853_RS20045 PF14760 Rnk N-terminus D0853_RS20045 PF01272 Transcription elongation factor, GreA/GreB, C-term D0853_RS20090 PF13462 Thioredoxin D0853_RS20090 PF06965 Na+/H+ antiporter 1 D0853_RS20115 PF09154 Domain of unknown function (DUF1939) D0853_RS20115 PF00128 Alpha amylase, catalytic domain D0853_RS20130 PF00672 HAMP domain D0853_RS20130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS20135 PF01168 Alanine racemase, N-terminal domain D0853_RS20135 PF00842 Alanine racemase, C-terminal domain D0853_RS20155 PF09330 D-lactate dehydrogenase, membrane binding D0853_RS20155 PF01565 FAD binding domain D0853_RS20160 PF03466 LysR substrate binding domain D0853_RS20160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS20180 PF05762 VWA domain containing CoxE-like protein D0853_RS20185 PF12592 Protein of unknown function (DUF3763) D0853_RS20185 PF17868 AAA lid domain D0853_RS20185 PF07728 AAA domain (dynein-related subfamily) D0853_RS20195 PF01212 Beta-eliminating lyase D0853_RS20200 PF00034 Cytochrome c D0853_RS20210 PF03606 C4-dicarboxylate anaerobic carrier D0853_RS20220 PF07690 Major Facilitator Superfamily D0853_RS20230 PF08212 Lipocalin-like domain D0853_RS20250 PF13476 AAA domain D0853_RS20255 PF12320 Type 5 capsule protein repressor C-terminal domain D0853_RS20255 PF00149 Calcineurin-like phosphoesterase D0853_RS20270 PF04717 Type VI secretion system, phage-baseplate injector D0853_RS20270 PF06715 Gp5 C-terminal repeat (3 copies) D0853_RS20280 PF00004 ATPase family associated with various cellular activities (AAA) D0853_RS20280 PF07724 AAA domain (Cdc48 subfamily) D0853_RS20280 PF17871 AAA lid domain D0853_RS20280 PF10431 C-terminal, D2-small domain, of ClpB protein D0853_RS20290 PF05947 Type VI secretion system, TssF D0853_RS20305 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D0853_RS20310 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath D0853_RS20315 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 D0853_RS20335 PF14331 ImcF-related N-terminal domain D0853_RS20335 PF06744 Type VI secretion protein IcmF C-terminal D0853_RS20335 PF06761 Intracellular multiplication and human macrophage-killing D0853_RS20340 PF00691 OmpA family D0853_RS20340 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0853_RS20345 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE D0853_RS20360 PF03793 PASTA domain D0853_RS20360 PF00069 Protein kinase domain D0853_RS20385 PF00072 Response regulator receiver domain D0853_RS20385 PF00211 Adenylate and Guanylate cyclase catalytic domain D0853_RS20400 PF08361 MAATS-type transcriptional repressor, C-terminal region D0853_RS20400 PF00440 Bacterial regulatory proteins, tetR family D0853_RS20415 PF04324 BFD-like [2Fe-2S] binding domain D0853_RS20415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D0853_RS20415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D0853_RS20415 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS20415 PF13806 Rieske-like [2Fe-2S] domain D0853_RS20415 PF18267 Rubredoxin NAD+ reductase C-terminal domain D0853_RS20420 PF00005 ABC transporter D0853_RS20425 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS20440 PF03861 ANTAR domain D0853_RS20440 PF08376 Nitrate and nitrite sensing D0853_RS20445 PF01738 Dienelactone hydrolase family D0853_RS20455 PF02885 Glycosyl transferase family, helical bundle domain D0853_RS20455 PF00591 Glycosyl transferase family, a/b domain D0853_RS20460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D0853_RS20460 PF10414 Sirohaem synthase dimerisation region D0853_RS20460 PF14824 Sirohaem biosynthesis protein central D0853_RS20465 PF01568 Molydopterin dinucleotide binding domain D0853_RS20465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0853_RS20465 PF00384 Molybdopterin oxidoreductase D0853_RS20475 PF03222 Tryptophan/tyrosine permease family D0853_RS20485 PF00072 Response regulator receiver domain D0853_RS20485 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS20495 PF00082 Subtilase family D0853_RS20495 PF01483 Proprotein convertase P-domain D0853_RS20505 PF00245 Alkaline phosphatase D0853_RS20520 PF00072 Response regulator receiver domain D0853_RS20520 PF00486 Transcriptional regulatory protein, C terminal D0853_RS20540 PF01048 Phosphorylase superfamily D0853_RS20545 PF04973 Nicotinamide mononucleotide transporter D0853_RS20555 PF00356 Bacterial regulatory proteins, lacI family D0853_RS20560 PF00294 pfkB family carbohydrate kinase D0853_RS20565 PF13407 Periplasmic binding protein domain D0853_RS20570 PF02653 Branched-chain amino acid transport system / permease component D0853_RS20575 PF00005 ABC transporter D0853_RS20580 PF05025 RbsD / FucU transport protein family D0853_RS20585 PF00563 EAL domain D0853_RS20585 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS20590 PF01048 Phosphorylase superfamily D0853_RS20635 PF04116 Fatty acid hydroxylase superfamily D0853_RS20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS20650 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS20650 PF09308 LuxQ, periplasmic D0853_RS20650 PF00072 Response regulator receiver domain D0853_RS20655 PF03150 Di-haem cytochrome c peroxidase D0853_RS20655 PF00034 Cytochrome c D0853_RS20670 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS20670 PF03707 Bacterial signalling protein N terminal repeat D0853_RS20670 PF13188 PAS domain D0853_RS20670 PF00563 EAL domain D0853_RS20680 PF16200 C-terminal region of band_7 D0853_RS20680 PF01145 SPFH domain / Band 7 family D0853_RS20690 PF00881 Nitroreductase family D0853_RS20695 PF00571 CBS domain D0853_RS20695 PF00005 ABC transporter D0853_RS20700 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS20705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D0853_RS20710 PF00732 GMC oxidoreductase D0853_RS20710 PF05199 GMC oxidoreductase D0853_RS20715 PF00171 Aldehyde dehydrogenase family D0853_RS20720 PF00440 Bacterial regulatory proteins, tetR family D0853_RS20720 PF13977 BetI-type transcriptional repressor, C-terminal D0853_RS20725 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS20725 PF17151 Periplasmic sensor domain D0853_RS20740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0853_RS20740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0853_RS20750 PF00378 Enoyl-CoA hydratase/isomerase D0853_RS20755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0853_RS20755 PF02770 Acyl-CoA dehydrogenase, middle domain D0853_RS20755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0853_RS20760 PF00171 Aldehyde dehydrogenase family D0853_RS20765 PF00108 Thiolase, N-terminal domain D0853_RS20765 PF02803 Thiolase, C-terminal domain D0853_RS20770 PF00376 MerR family regulatory protein D0853_RS20770 PF09278 MerR, DNA binding D0853_RS20775 PF02770 Acyl-CoA dehydrogenase, middle domain D0853_RS20775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D0853_RS20775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D0853_RS20780 PF01039 Carboxyl transferase domain D0853_RS20785 PF00378 Enoyl-CoA hydratase/isomerase D0853_RS20790 PF00289 Biotin carboxylase, N-terminal domain D0853_RS20790 PF02785 Biotin carboxylase C-terminal domain D0853_RS20790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D0853_RS20790 PF00364 Biotin-requiring enzyme D0853_RS20795 PF00682 HMGL-like D0853_RS20800 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS20800 PF01627 Hpt domain D0853_RS20800 PF00672 HAMP domain D0853_RS20800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0853_RS20800 PF00072 Response regulator receiver domain D0853_RS20800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS20815 PF12795 Mechanosensitive ion channel porin domain D0853_RS20815 PF00924 Mechanosensitive ion channel D0853_RS20815 PF12794 Mechanosensitive ion channel inner membrane domain 1 D0853_RS20825 PF14602 Hexapeptide repeat of succinyl-transferase D0853_RS20825 PF12464 Maltose acetyltransferase D0853_RS20830 PF00155 Aminotransferase class I and II D0853_RS20830 PF00392 Bacterial regulatory proteins, gntR family D0853_RS20835 PF01654 Cytochrome bd terminal oxidase subunit I D0853_RS20840 PF02322 Cytochrome bd terminal oxidase subunit II D0853_RS20850 PF02567 Phenazine biosynthesis-like protein D0853_RS20855 PF02627 Carboxymuconolactone decarboxylase family D0853_RS20860 PF13411 MerR HTH family regulatory protein D0853_RS20870 PF00034 Cytochrome c D0853_RS20880 PF05724 Thiopurine S-methyltransferase (TPMT) D0853_RS20885 PF14535 AMP-binding enzyme C-terminal domain D0853_RS20885 PF00501 AMP-binding enzyme D0853_RS20890 PF00005 ABC transporter D0853_RS20915 PF12399 Branched-chain amino acid ATP-binding cassette transporter D0853_RS20915 PF00005 ABC transporter D0853_RS20930 PF01012 Electron transfer flavoprotein domain D0853_RS20935 PF00766 Electron transfer flavoprotein FAD-binding domain D0853_RS20935 PF01012 Electron transfer flavoprotein domain D0853_RS20940 PF13193 AMP-binding enzyme C-terminal domain D0853_RS20940 PF00501 AMP-binding enzyme D0853_RS20945 PF00478 IMP dehydrogenase / GMP reductase domain D0853_RS20950 PF01256 Carbohydrate kinase D0853_RS20950 PF03853 YjeF-related protein N-terminus D0853_RS20960 PF00072 Response regulator receiver domain D0853_RS20965 PF00248 Aldo/keto reductase family D0853_RS20980 PF00654 Voltage gated chloride channel D0853_RS20990 PF01566 Natural resistance-associated macrophage protein D0853_RS20995 PF01227 GTP cyclohydrolase I D0853_RS21000 PF03454 MoeA C-terminal region (domain IV) D0853_RS21000 PF00994 Probable molybdopterin binding domain D0853_RS21000 PF03453 MoeA N-terminal region (domain I and II) D0853_RS21005 PF00899 ThiF family D0853_RS21025 PF00581 Rhodanese-like domain D0853_RS21030 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS21030 PF00563 EAL domain D0853_RS21030 PF03707 Bacterial signalling protein N terminal repeat D0853_RS21035 PF08329 Chitinase A, N-terminal domain D0853_RS21035 PF00704 Glycosyl hydrolases family 18 D0853_RS21055 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0853_RS21060 PF02780 Transketolase, C-terminal domain D0853_RS21060 PF02779 Transketolase, pyrimidine binding domain D0853_RS21060 PF00456 Transketolase, thiamine diphosphate binding domain D0853_RS21065 PF08447 PAS fold D0853_RS21065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS21075 PF07690 Major Facilitator Superfamily D0853_RS21080 PF00793 DAHP synthetase I family D0853_RS21090 PF01389 OmpA-like transmembrane domain D0853_RS21090 PF00691 OmpA family D0853_RS21095 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS21100 PF00472 RF-1 domain D0853_RS21105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS21105 PF12729 Four helix bundle sensory module for signal transduction D0853_RS21105 PF00672 HAMP domain D0853_RS21110 PF00873 AcrB/AcrD/AcrF family D0853_RS21115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS21120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D0853_RS21125 PF07687 Peptidase dimerisation domain D0853_RS21125 PF01546 Peptidase family M20/M25/M40 D0853_RS21140 PF00196 Bacterial regulatory proteins, luxR family D0853_RS21140 PF00072 Response regulator receiver domain D0853_RS21145 PF00672 HAMP domain D0853_RS21145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D0853_RS21145 PF07730 Histidine kinase D0853_RS21145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS21150 PF13187 4Fe-4S dicluster domain D0853_RS21150 PF12838 4Fe-4S dicluster domain D0853_RS21160 PF00384 Molybdopterin oxidoreductase D0853_RS21160 PF01568 Molydopterin dinucleotide binding domain D0853_RS21160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D0853_RS21165 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D0853_RS21170 PF03264 NapC/NirT cytochrome c family, N-terminal region D0853_RS21180 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D0853_RS21180 PF00561 alpha/beta hydrolase fold D0853_RS21190 PF02803 Thiolase, C-terminal domain D0853_RS21190 PF00108 Thiolase, N-terminal domain D0853_RS21195 PF00106 short chain dehydrogenase D0853_RS21200 PF01810 LysE type translocator D0853_RS21210 PF02355 Protein export membrane protein D0853_RS21210 PF07549 SecD/SecF GG Motif D0853_RS21215 PF07549 SecD/SecF GG Motif D0853_RS21215 PF13721 SecD export protein N-terminal TM region D0853_RS21215 PF02355 Protein export membrane protein D0853_RS21245 PF01037 Lrp/AsnC ligand binding domain D0853_RS21265 PF00529 HlyD membrane-fusion protein of T1SS D0853_RS21265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS21275 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS21275 PF00072 Response regulator receiver domain D0853_RS21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS21275 PF09308 LuxQ, periplasmic D0853_RS21280 PF13407 Periplasmic binding protein domain D0853_RS21285 PF01541 GIY-YIG catalytic domain D0853_RS21290 PF04337 Protein of unknown function, DUF480 D0853_RS21305 PF04363 Protein of unknown function (DUF496) D0853_RS21310 PF01554 MatE D0853_RS21315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0853_RS21320 PF00072 Response regulator receiver domain D0853_RS21320 PF01627 Hpt domain D0853_RS21320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D0853_RS21320 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS21320 PF00672 HAMP domain D0853_RS21325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D0853_RS21325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D0853_RS21340 PF03466 LysR substrate binding domain D0853_RS21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS21345 PF13404 AsnC-type helix-turn-helix domain D0853_RS21345 PF01037 Lrp/AsnC ligand binding domain D0853_RS21355 PF13520 Amino acid permease D0853_RS21360 PF00155 Aminotransferase class I and II D0853_RS21360 PF00392 Bacterial regulatory proteins, gntR family D0853_RS21370 PF03109 ABC1 family D0853_RS21375 PF01769 Divalent cation transporter D0853_RS21375 PF00571 CBS domain D0853_RS21375 PF03448 MgtE intracellular N domain D0853_RS21385 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D0853_RS21390 PF07969 Amidohydrolase family D0853_RS21400 PF01966 HD domain D0853_RS21415 PF07690 Major Facilitator Superfamily D0853_RS21425 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D0853_RS21430 PF00255 Glutathione peroxidase D0853_RS21445 PF01548 Transposase D0853_RS21445 PF02371 Transposase IS116/IS110/IS902 family D0853_RS21495 PF06958 S-type Pyocin D0853_RS21500 PF01320 Colicin immunity protein / pyocin immunity protein D0853_RS21515 PF13538 UvrD-like helicase C-terminal domain D0853_RS21515 PF14490 Helix-hairpin-helix containing domain D0853_RS21515 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain D0853_RS21540 PF01323 DSBA-like thioredoxin domain D0853_RS21560 PF00106 short chain dehydrogenase D0853_RS21565 PF00072 Response regulator receiver domain D0853_RS21565 PF00486 Transcriptional regulatory protein, C terminal D0853_RS21570 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS21570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS21570 PF00672 HAMP domain D0853_RS21580 PF01219 Prokaryotic diacylglycerol kinase D0853_RS21585 PF00884 Sulfatase D0853_RS21585 PF08019 Phosphoethanolamine transferase EptA/EptB D0853_RS21590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D0853_RS21600 PF07690 Major Facilitator Superfamily D0853_RS21615 PF01047 MarR family D0853_RS21625 PF01734 Patatin-like phospholipase D0853_RS21635 PF00313 'Cold-shock' DNA-binding domain D0853_RS21655 PF00962 Adenosine/AMP deaminase D0853_RS21660 PF08534 Redoxin D0853_RS21660 PF00462 Glutaredoxin D0853_RS21675 PF00768 D-alanyl-D-alanine carboxypeptidase D0853_RS21675 PF07943 Penicillin-binding protein 5, C-terminal domain D0853_RS21690 PF02798 Glutathione S-transferase, N-terminal domain D0853_RS21695 PF00440 Bacterial regulatory proteins, tetR family D0853_RS21695 PF02909 Tetracyclin repressor-like, C-terminal domain D0853_RS21700 PF01872 RibD C-terminal domain D0853_RS21800 PF03347 Vibrio thermostable direct hemolysin D0853_RS21850 PF00563 EAL domain D0853_RS21850 PF12792 CSS motif domain associated with EAL D0853_RS21935 PF02874 ATP synthase alpha/beta family, beta-barrel domain D0853_RS21935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0853_RS21935 PF18269 T3SS EscN ATPase C-terminal domain D0853_RS21940 PF00263 Bacterial type II and III secretion system protein D0853_RS21940 PF03958 Bacterial type II/III secretion system short domain D0853_RS21955 PF00813 FliP family D0853_RS21975 PF03421 YopJ Serine/Threonine acetyltransferase D0853_RS21990 PF00486 Transcriptional regulatory protein, C terminal D0853_RS22015 PF00691 OmpA family D0853_RS22020 PF01312 FlhB HrpN YscU SpaS Family D0853_RS22025 PF00771 FHIPEP family D0853_RS22140 PF13322 Domain of unknown function (DUF4092) D0853_RS22140 PF17291 N-terminal domain of M60-like peptidases D0853_RS22140 PF13402 Peptidase M60, enhancin and enhancin-like D0853_RS22155 PF03347 Vibrio thermostable direct hemolysin D0853_RS22265 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS22270 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS22270 PF14785 Maltose transport system permease protein MalF P2 domain D0853_RS22275 PF01547 Bacterial extracellular solute-binding protein D0853_RS22280 PF08402 TOBE domain D0853_RS22280 PF00005 ABC transporter D0853_RS22285 PF02397 Bacterial sugar transferase D0853_RS22300 PF02706 Chain length determinant protein D0853_RS22300 PF13807 G-rich domain on putative tyrosine kinase D0853_RS22300 PF13614 AAA domain D0853_RS22310 PF13439 Glycosyltransferase Family 4 D0853_RS22310 PF00534 Glycosyl transferases group 1 D0853_RS22340 PF04266 ASCH domain D0853_RS22345 PF16925 Tetracyclin repressor-like, C-terminal domain D0853_RS22345 PF00440 Bacterial regulatory proteins, tetR family D0853_RS22350 PF16884 N-terminal domain of oxidoreductase D0853_RS22350 PF00107 Zinc-binding dehydrogenase D0853_RS22355 PF13417 Glutathione S-transferase, N-terminal domain D0853_RS22360 PF00199 Catalase D0853_RS22360 PF06628 Catalase-related immune-responsive D0853_RS22365 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D0853_RS22365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D0853_RS22375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0853_RS22385 PF12833 Helix-turn-helix domain D0853_RS22390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0853_RS22390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D0853_RS22395 PF01238 Phosphomannose isomerase type I D0853_RS22405 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS22410 PF00127 Copper binding proteins, plastocyanin/azurin family D0853_RS22415 PF00563 EAL domain D0853_RS22415 PF03707 Bacterial signalling protein N terminal repeat D0853_RS22415 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS22420 PF02386 Cation transport protein D0853_RS22425 PF02254 TrkA-N domain D0853_RS22425 PF02080 TrkA-C domain D0853_RS22430 PF00486 Transcriptional regulatory protein, C terminal D0853_RS22430 PF00072 Response regulator receiver domain D0853_RS22435 PF02702 Osmosensitive K+ channel His kinase sensor domain D0853_RS22435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS22435 PF13493 Domain of unknown function (DUF4118) D0853_RS22435 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS22440 PF00664 ABC transporter transmembrane region D0853_RS22440 PF00005 ABC transporter D0853_RS22445 PF00593 TonB dependent receptor D0853_RS22445 PF07715 TonB-dependent Receptor Plug Domain D0853_RS22450 PF00005 ABC transporter D0853_RS22455 PF01497 Periplasmic binding protein D0853_RS22460 PF01032 FecCD transport family D0853_RS22470 PF00691 OmpA family D0853_RS22485 PF00529 HlyD membrane-fusion protein of T1SS D0853_RS22490 PF00005 ABC transporter D0853_RS22490 PF00664 ABC transporter transmembrane region D0853_RS22500 PF00196 Bacterial regulatory proteins, luxR family D0853_RS22505 PF00196 Bacterial regulatory proteins, luxR family D0853_RS22515 PF00672 HAMP domain D0853_RS22515 PF02743 Cache domain D0853_RS22515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS22525 PF07726 ATPase family associated with various cellular activities (AAA) D0853_RS22525 PF17863 AAA lid domain D0853_RS22530 PF01882 Protein of unknown function DUF58 D0853_RS22540 PF13519 von Willebrand factor type A domain D0853_RS22545 PF07584 Aerotolerance regulator N-terminal D0853_RS22545 PF13519 von Willebrand factor type A domain D0853_RS22560 PF00005 ABC transporter D0853_RS22565 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS22570 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS22575 PF12849 PBP superfamily domain D0853_RS22580 PF00672 HAMP domain D0853_RS22580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS22600 PF07715 TonB-dependent Receptor Plug Domain D0853_RS22600 PF00593 TonB dependent receptor D0853_RS22605 PF00326 Prolyl oligopeptidase family D0853_RS22605 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0853_RS22610 PF00270 DEAD/DEAH box helicase D0853_RS22610 PF00271 Helicase conserved C-terminal domain D0853_RS22620 PF03734 L,D-transpeptidase catalytic domain D0853_RS22620 PF01476 LysM domain D0853_RS22620 PF17969 L,D-transpeptidase C-terminal domain D0853_RS22625 PF00875 DNA photolyase D0853_RS22625 PF03441 FAD binding domain of DNA photolyase D0853_RS22630 PF13411 MerR HTH family regulatory protein D0853_RS22635 PF08349 Protein of unknown function (DUF1722) D0853_RS22645 PF01048 Phosphorylase superfamily D0853_RS22660 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS22665 PF11742 Protein of unknown function (DUF3302) D0853_RS22670 PF00529 HlyD membrane-fusion protein of T1SS D0853_RS22670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS22675 PF07155 ECF-type riboflavin transporter, S component D0853_RS22680 PF00005 ABC transporter D0853_RS22680 PF12558 ATP-binding cassette cobalt transporter D0853_RS22695 PF13237 4Fe-4S dicluster domain D0853_RS22695 PF12801 4Fe-4S binding domain D0853_RS22700 PF12800 4Fe-4S binding domain D0853_RS22700 PF12838 4Fe-4S dicluster domain D0853_RS22705 PF00583 Acetyltransferase (GNAT) family D0853_RS22725 PF07238 PilZ domain D0853_RS22725 PF12945 Flagellar protein YcgR D0853_RS22730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS22730 PF00672 HAMP domain D0853_RS22735 PF13654 AAA domain D0853_RS22735 PF05362 Lon protease (S16) C-terminal proteolytic domain D0853_RS22745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS22745 PF00005 ABC transporter D0853_RS22750 PF00326 Prolyl oligopeptidase family D0853_RS22750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0853_RS22755 PF03466 LysR substrate binding domain D0853_RS22755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS22760 PF02652 L-lactate permease D0853_RS22765 PF01070 FMN-dependent dehydrogenase D0853_RS22775 PF00924 Mechanosensitive ion channel D0853_RS22780 PF00194 Eukaryotic-type carbonic anhydrase D0853_RS22815 PF00107 Zinc-binding dehydrogenase D0853_RS22815 PF08240 Alcohol dehydrogenase GroES-like domain D0853_RS22820 PF00155 Aminotransferase class I and II D0853_RS22825 PF00563 EAL domain D0853_RS22825 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS22825 PF03707 Bacterial signalling protein N terminal repeat D0853_RS22830 PF00497 Bacterial extracellular solute-binding proteins, family 3 D0853_RS22835 PF00266 Aminotransferase class-V D0853_RS22840 PF00080 Copper/zinc superoxide dismutase (SODC) D0853_RS22845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS22845 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS22845 PF08448 PAS fold D0853_RS22845 PF13426 PAS domain D0853_RS22845 PF00072 Response regulator receiver domain D0853_RS22850 PF00072 Response regulator receiver domain D0853_RS22850 PF00486 Transcriptional regulatory protein, C terminal D0853_RS22880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS22880 PF03466 LysR substrate binding domain D0853_RS22885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0853_RS22920 PF03466 LysR substrate binding domain D0853_RS22920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS22935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D0853_RS22935 PF18269 T3SS EscN ATPase C-terminal domain D0853_RS22945 PF01706 FliG C-terminal domain D0853_RS22945 PF14841 FliG middle domain D0853_RS22945 PF14842 FliG N-terminal domain D0853_RS22950 PF08345 Flagellar M-ring protein C-terminal D0853_RS22950 PF01514 Secretory protein of YscJ/FliF family D0853_RS22955 PF02049 Flagellar hook-basal body complex protein FliE D0853_RS22960 PF00158 Sigma-54 interaction domain D0853_RS22960 PF00072 Response regulator receiver domain D0853_RS22960 PF02954 Bacterial regulatory protein, Fis family D0853_RS22975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D0853_RS22980 PF00813 FliP family D0853_RS22985 PF01313 Bacterial export proteins, family 3 D0853_RS22990 PF01311 Bacterial export proteins, family 1 D0853_RS22995 PF01312 FlhB HrpN YscU SpaS Family D0853_RS23000 PF00771 FHIPEP family D0853_RS23010 PF00669 Bacterial flagellin N-terminal helical region D0853_RS23010 PF00700 Bacterial flagellin C-terminal helical region D0853_RS23020 PF02465 Flagellar hook-associated protein 2 N-terminus D0853_RS23020 PF07195 Flagellar hook-associated protein 2 C-terminus D0853_RS23020 PF07196 Flagellin hook IN motif D0853_RS23025 PF02561 Flagellar protein FliS D0853_RS23040 PF03748 Flagellar basal body-associated protein FliL D0853_RS23045 PF04542 Sigma-70 region 2 D0853_RS23045 PF04545 Sigma-70, region 4 D0853_RS23050 PF01618 MotA/TolQ/ExbB proton channel family D0853_RS23055 PF00691 OmpA family D0853_RS23055 PF13677 Membrane MotB of proton-channel complex MotA/MotB D0853_RS23065 PF08000 Bacterial PH domain D0853_RS23105 PF02901 Pyruvate formate lyase-like D0853_RS23105 PF01228 Glycine radical D0853_RS23110 PF04055 Radical SAM superfamily D0853_RS23115 PF00923 Transaldolase/Fructose-6-phosphate aldolase D0853_RS23125 PF00583 Acetyltransferase (GNAT) family D0853_RS23140 PF07690 Major Facilitator Superfamily D0853_RS23145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS23145 PF03466 LysR substrate binding domain D0853_RS23150 PF00892 EamA-like transporter family D0853_RS23175 PF13533 Biotin-lipoyl like D0853_RS23185 PF01594 AI-2E family transporter D0853_RS23190 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D0853_RS23200 PF00970 Oxidoreductase FAD-binding domain D0853_RS23200 PF00175 Oxidoreductase NAD-binding domain D0853_RS23210 PF09905 DNA-binding protein VF530 D0853_RS23215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS23215 PF03466 LysR substrate binding domain D0853_RS23225 PF00881 Nitroreductase family D0853_RS23230 PF12833 Helix-turn-helix domain D0853_RS23230 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D0853_RS23235 PF00128 Alpha amylase, catalytic domain D0853_RS23235 PF00686 Starch binding domain D0853_RS23240 PF00768 D-alanyl-D-alanine carboxypeptidase D0853_RS23240 PF07943 Penicillin-binding protein 5, C-terminal domain D0853_RS23245 PF00561 alpha/beta hydrolase fold D0853_RS23255 PF00581 Rhodanese-like domain D0853_RS23255 PF17773 UPF0176 acylphosphatase like domain D0853_RS23260 PF18416 N-acetylglucosamine binding protein domain 2 D0853_RS23260 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D0853_RS23265 PF01734 Patatin-like phospholipase D0853_RS23270 PF01914 MarC family integral membrane protein D0853_RS23275 PF00881 Nitroreductase family D0853_RS23280 PF10531 SLBB domain D0853_RS23280 PF02563 Polysaccharide biosynthesis/export protein D0853_RS23280 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D0853_RS23285 PF01451 Low molecular weight phosphotyrosine protein phosphatase D0853_RS23290 PF13807 G-rich domain on putative tyrosine kinase D0853_RS23290 PF13614 AAA domain D0853_RS23290 PF02706 Chain length determinant protein D0853_RS23300 PF08803 Putative mono-oxygenase ydhR D0853_RS23305 PF03466 LysR substrate binding domain D0853_RS23305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS23315 PF00375 Sodium:dicarboxylate symporter family D0853_RS23320 PF06803 Protein of unknown function (DUF1232) D0853_RS23325 PF07687 Peptidase dimerisation domain D0853_RS23325 PF01546 Peptidase family M20/M25/M40 D0853_RS23330 PF07670 Nucleoside recognition D0853_RS23335 PF07670 Nucleoside recognition D0853_RS23350 PF00128 Alpha amylase, catalytic domain D0853_RS23355 PF00912 Transglycosylase D0853_RS23360 PF02806 Alpha amylase, C-terminal all-beta domain D0853_RS23360 PF00128 Alpha amylase, catalytic domain D0853_RS23360 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0853_RS23365 PF02446 4-alpha-glucanotransferase D0853_RS23370 PF00343 Carbohydrate phosphorylase D0853_RS23385 PF00196 Bacterial regulatory proteins, luxR family D0853_RS23385 PF17874 MalT-like TPR region D0853_RS23400 PF02630 SCO1/SenC D0853_RS23410 PF00367 phosphotransferase system, EIIB D0853_RS23410 PF02378 Phosphotransferase system, EIIC D0853_RS23415 PF03193 RsgA GTPase D0853_RS23420 PF00375 Sodium:dicarboxylate symporter family D0853_RS23430 PF08543 Phosphomethylpyrimidine kinase D0853_RS23440 PF13520 Amino acid permease D0853_RS23445 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D0853_RS23445 PF01276 Orn/Lys/Arg decarboxylase, major domain D0853_RS23445 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D0853_RS23460 PF18494 Pullulanase Ins domain D0853_RS23460 PF03714 Bacterial pullanase-associated domain D0853_RS23460 PF11852 Domain of unknown function (DUF3372) D0853_RS23460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0853_RS23460 PF17967 Pullulanase N2 domain D0853_RS23465 PF04231 Endonuclease I D0853_RS23475 PF16657 Maltogenic Amylase, C-terminal domain D0853_RS23475 PF02903 Alpha amylase, N-terminal ig-like domain D0853_RS23475 PF00128 Alpha amylase, catalytic domain D0853_RS23490 PF02264 LamB porin D0853_RS23495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D0853_RS23495 PF00128 Alpha amylase, catalytic domain D0853_RS23505 PF07690 Major Facilitator Superfamily D0853_RS23515 PF04225 Opacity-associated protein A LysM-like domain D0853_RS23515 PF01551 Peptidase family M23 D0853_RS23525 PF00675 Insulinase (Peptidase family M16) D0853_RS23525 PF05193 Peptidase M16 inactive domain D0853_RS23530 PF00672 HAMP domain D0853_RS23530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS23535 PF00005 ABC transporter D0853_RS23540 PF01032 FecCD transport family D0853_RS23545 PF01032 FecCD transport family D0853_RS23550 PF01497 Periplasmic binding protein D0853_RS23555 PF07715 TonB-dependent Receptor Plug Domain D0853_RS23555 PF00593 TonB dependent receptor D0853_RS23555 PF07660 Secretin and TonB N terminus short domain D0853_RS23560 PF07715 TonB-dependent Receptor Plug Domain D0853_RS23560 PF00593 TonB dependent receptor D0853_RS23565 PF02655 ATP-grasp domain D0853_RS23565 PF00206 Lyase D0853_RS23570 PF04183 IucA / IucC family D0853_RS23570 PF06276 Ferric iron reductase FhuF-like transporter D0853_RS23580 PF04183 IucA / IucC family D0853_RS23580 PF06276 Ferric iron reductase FhuF-like transporter D0853_RS23585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0853_RS23585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D0853_RS23590 PF01547 Bacterial extracellular solute-binding protein D0853_RS23595 PF08521 Two-component sensor kinase N-terminal D0853_RS23595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS23595 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS23600 PF00072 Response regulator receiver domain D0853_RS23600 PF00486 Transcriptional regulatory protein, C terminal D0853_RS23610 PF00367 phosphotransferase system, EIIB D0853_RS23610 PF02378 Phosphotransferase system, EIIC D0853_RS23620 PF01136 Peptidase family U32 D0853_RS23625 PF02653 Branched-chain amino acid transport system / permease component D0853_RS23630 PF00005 ABC transporter D0853_RS23635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D0853_RS23640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D0853_RS23640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D0853_RS23645 PF00596 Class II Aldolase and Adducin N-terminal domain D0853_RS23650 PF02610 L-arabinose isomerase D0853_RS23650 PF11762 L-arabinose isomerase C-terminal domain D0853_RS23660 PF02311 AraC-like ligand binding domain D0853_RS23660 PF12833 Helix-turn-helix domain D0853_RS23675 PF02566 OsmC-like protein D0853_RS23680 PF01047 MarR family D0853_RS23685 PF10417 C-terminal domain of 1-Cys peroxiredoxin D0853_RS23685 PF00578 AhpC/TSA family D0853_RS23690 PF13192 Thioredoxin domain D0853_RS23690 PF07992 Pyridine nucleotide-disulphide oxidoreductase D0853_RS23710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS23710 PF03466 LysR substrate binding domain D0853_RS23720 PF01965 DJ-1/PfpI family D0853_RS23720 PF12833 Helix-turn-helix domain D0853_RS23725 PF04542 Sigma-70 region 2 D0853_RS23725 PF08281 Sigma-70, region 4 D0853_RS23740 PF00672 HAMP domain D0853_RS23740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS23740 PF02743 Cache domain D0853_RS23745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS23745 PF03466 LysR substrate binding domain D0853_RS23750 PF11975 Family 4 glycosyl hydrolase C-terminal domain D0853_RS23750 PF02056 Family 4 glycosyl hydrolase D0853_RS23765 PF03473 MOSC domain D0853_RS23765 PF03475 3-alpha domain D0853_RS23770 PF00271 Helicase conserved C-terminal domain D0853_RS23770 PF00270 DEAD/DEAH box helicase D0853_RS23775 PF03786 D-mannonate dehydratase (UxuA) D0853_RS23780 PF00392 Bacterial regulatory proteins, gntR family D0853_RS23780 PF07729 FCD domain D0853_RS23785 PF03480 Bacterial extracellular solute-binding protein, family 7 D0853_RS23790 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D0853_RS23795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D0853_RS23800 PF01232 Mannitol dehydrogenase Rossmann domain D0853_RS23800 PF08125 Mannitol dehydrogenase C-terminal domain D0853_RS23805 PF02614 Glucuronate isomerase D0853_RS23810 PF00294 pfkB family carbohydrate kinase D0853_RS23815 PF01081 KDPG and KHG aldolase D0853_RS23820 PF10688 Bacterial inner membrane protein D0853_RS23840 PF12833 Helix-turn-helix domain D0853_RS23840 PF06719 AraC-type transcriptional regulator N-terminus D0853_RS23850 PF00005 ABC transporter D0853_RS23850 PF00664 ABC transporter transmembrane region D0853_RS23860 PF01037 Lrp/AsnC ligand binding domain D0853_RS23895 PF00474 Sodium:solute symporter family D0853_RS23905 PF14850 DNA-binding domain of Proline dehydrogenase D0853_RS23905 PF01619 Proline dehydrogenase D0853_RS23905 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D0853_RS23905 PF00171 Aldehyde dehydrogenase family D0853_RS23910 PF12833 Helix-turn-helix domain D0853_RS23925 PF01243 Pyridoxamine 5'-phosphate oxidase D0853_RS23925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D0853_RS23930 PF02743 Cache domain D0853_RS23930 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS23930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS23935 PF02954 Bacterial regulatory protein, Fis family D0853_RS23935 PF00072 Response regulator receiver domain D0853_RS23935 PF00158 Sigma-54 interaction domain D0853_RS23940 PF00529 HlyD membrane-fusion protein of T1SS D0853_RS23955 PF00664 ABC transporter transmembrane region D0853_RS23955 PF00005 ABC transporter D0853_RS23955 PF03412 Peptidase C39 family D0853_RS23965 PF03358 NADPH-dependent FMN reductase D0853_RS23970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D0853_RS23975 PF00246 Zinc carboxypeptidase D0853_RS23980 PF01380 SIS domain D0853_RS23980 PF01418 Helix-turn-helix domain, rpiR family D0853_RS23990 PF01380 SIS domain D0853_RS23995 PF02378 Phosphotransferase system, EIIC D0853_RS23995 PF00367 phosphotransferase system, EIIB D0853_RS24000 PF00267 Gram-negative porin D0853_RS24005 PF03575 Peptidase family S51 D0853_RS24010 PF03466 LysR substrate binding domain D0853_RS24010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS24015 PF00132 Bacterial transferase hexapeptide (six repeats) D0853_RS24025 PF05127 Helicase D0853_RS24025 PF13718 GNAT acetyltransferase 2 D0853_RS24030 PF08775 ParB family D0853_RS24030 PF02195 ParB-like nuclease domain D0853_RS24035 PF18607 ParA helix turn helix domain D0853_RS24035 PF13614 AAA domain D0853_RS24050 PF00005 ABC transporter D0853_RS24050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS24055 PF00005 ABC transporter D0853_RS24055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D0853_RS24065 PF00925 GTP cyclohydrolase II D0853_RS24065 PF08719 Domain of unknown function (DUF1768) D0853_RS24080 PF17149 Periplasmic sensor domain found in signal transduction proteins D0853_RS24080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS24080 PF01627 Hpt domain D0853_RS24080 PF00072 Response regulator receiver domain D0853_RS24080 PF00672 HAMP domain D0853_RS24080 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS24090 PF01709 Transcriptional regulator D0853_RS24095 PF01098 Cell cycle protein D0853_RS24110 PF00005 ABC transporter D0853_RS24130 PF07694 5TMR of 5TMR-LYT D0853_RS24130 PF13492 GAF domain D0853_RS24130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS24130 PF06580 Histidine kinase D0853_RS24135 PF04397 LytTr DNA-binding domain D0853_RS24135 PF00072 Response regulator receiver domain D0853_RS24145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D0853_RS24150 PF00672 HAMP domain D0853_RS24150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS24150 PF17200 Single Cache domain 2 D0853_RS24165 PF00132 Bacterial transferase hexapeptide (six repeats) D0853_RS24180 PF03616 Sodium/glutamate symporter D0853_RS24190 PF00005 ABC transporter D0853_RS24195 PF00155 Aminotransferase class I and II D0853_RS24195 PF00392 Bacterial regulatory proteins, gntR family D0853_RS24200 PF03616 Sodium/glutamate symporter D0853_RS24215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D0853_RS24230 PF03466 LysR substrate binding domain D0853_RS24230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS24235 PF02678 Pirin D0853_RS24235 PF17954 Quercetinase C-terminal cupin domain D0853_RS24240 PF07681 DoxX D0853_RS24255 PF06029 AlkA N-terminal domain D0853_RS24255 PF00730 HhH-GPD superfamily base excision DNA repair protein D0853_RS24260 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D0853_RS24260 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D0853_RS24270 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D0853_RS24280 PF03600 Citrate transporter D0853_RS24300 PF08329 Chitinase A, N-terminal domain D0853_RS24300 PF00704 Glycosyl hydrolases family 18 D0853_RS24310 PF06865 Pyrimidine/purine nucleoside phosphorylase D0853_RS24320 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS24320 PF00563 EAL domain D0853_RS24330 PF01554 MatE D0853_RS24335 PF00849 RNA pseudouridylate synthase D0853_RS24350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS24350 PF03466 LysR substrate binding domain D0853_RS24365 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS24365 PF17152 Periplasmic sensor domain D0853_RS24375 PF00756 Putative esterase D0853_RS24380 PF00107 Zinc-binding dehydrogenase D0853_RS24380 PF08240 Alcohol dehydrogenase GroES-like domain D0853_RS24385 PF00797 N-acetyltransferase D0853_RS24390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS24390 PF03466 LysR substrate binding domain D0853_RS24405 PF01614 Bacterial transcriptional regulator D0853_RS24405 PF09339 IclR helix-turn-helix domain D0853_RS24415 PF10688 Bacterial inner membrane protein D0853_RS24420 PF07883 Cupin domain D0853_RS24435 PF00294 pfkB family carbohydrate kinase D0853_RS24440 PF01081 KDPG and KHG aldolase D0853_RS24455 PF13229 Right handed beta helix region D0853_RS24460 PF00474 Sodium:solute symporter family D0853_RS24465 PF14583 Oligogalacturonate lyase D0853_RS24470 PF04954 Siderophore-interacting protein D0853_RS24470 PF08021 Siderophore-interacting FAD-binding domain D0853_RS24475 PF01810 LysE type translocator D0853_RS24480 PF01037 Lrp/AsnC ligand binding domain D0853_RS24485 PF18416 N-acetylglucosamine binding protein domain 2 D0853_RS24485 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D0853_RS24500 PF13599 Pentapeptide repeats (9 copies) D0853_RS24505 PF03922 OmpW family D0853_RS24510 PF13533 Biotin-lipoyl like D0853_RS24515 PF07690 Major Facilitator Superfamily D0853_RS24525 PF12706 Beta-lactamase superfamily domain D0853_RS24535 PF01204 Trehalase D0853_RS24540 PF01661 Macro domain D0853_RS24545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0853_RS24550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS24550 PF03466 LysR substrate binding domain D0853_RS24560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS24560 PF03466 LysR substrate binding domain D0853_RS24575 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS24600 PF13556 PucR C-terminal helix-turn-helix domain D0853_RS24600 PF17853 GGDEF-like domain D0853_RS24600 PF05651 Putative sugar diacid recognition D0853_RS24605 PF02447 GntP family permease D0853_RS24610 PF02595 Glycerate kinase family D0853_RS24615 PF00155 Aminotransferase class I and II D0853_RS24615 PF00392 Bacterial regulatory proteins, gntR family D0853_RS24635 PF00583 Acetyltransferase (GNAT) family D0853_RS24660 PF03264 NapC/NirT cytochrome c family, N-terminal region D0853_RS24665 PF01568 Molydopterin dinucleotide binding domain D0853_RS24665 PF00384 Molybdopterin oxidoreductase D0853_RS24665 PF18364 Molybdopterin oxidoreductase N-terminal domain D0853_RS24675 PF02581 Thiamine monophosphate synthase D0853_RS24680 PF02110 Hydroxyethylthiazole kinase family D0853_RS24685 PF03070 TENA/THI-4/PQQC family D0853_RS24690 PF09084 NMT1/THI5 like D0853_RS24695 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS24700 PF00005 ABC transporter D0853_RS24705 PF08543 Phosphomethylpyrimidine kinase D0853_RS24715 PF01523 Putative modulator of DNA gyrase D0853_RS24720 PF01523 Putative modulator of DNA gyrase D0853_RS24725 PF04013 Putative SAM-dependent RNA methyltransferase D0853_RS24780 PF10928 Protein of unknown function (DUF2810) D0853_RS24785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D0853_RS24785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D0853_RS24795 PF03009 Glycerophosphoryl diester phosphodiesterase family D0853_RS24800 PF00056 lactate/malate dehydrogenase, NAD binding domain D0853_RS24800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D0853_RS24805 PF00072 Response regulator receiver domain D0853_RS24805 PF00486 Transcriptional regulatory protein, C terminal D0853_RS24810 PF16750 Sensor domain of 2-component histidine kinase D0853_RS24810 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS24810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS24810 PF00672 HAMP domain D0853_RS24815 PF00593 TonB dependent receptor D0853_RS24815 PF07715 TonB-dependent Receptor Plug Domain D0853_RS24825 PF01618 MotA/TolQ/ExbB proton channel family D0853_RS24830 PF01618 MotA/TolQ/ExbB proton channel family D0853_RS24835 PF02472 Biopolymer transport protein ExbD/TolR D0853_RS24875 PF01297 Zinc-uptake complex component A periplasmic D0853_RS24880 PF00005 ABC transporter D0853_RS24885 PF00950 ABC 3 transport family D0853_RS24900 PF00326 Prolyl oligopeptidase family D0853_RS24900 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D0853_RS24905 PF07690 Major Facilitator Superfamily D0853_RS24910 PF00491 Arginase family D0853_RS24915 PF17810 Arginine decarboxylase helical bundle domain D0853_RS24915 PF17944 Arginine decarboxylase C-terminal helical extension D0853_RS24915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D0853_RS24920 PF00753 Metallo-beta-lactamase superfamily D0853_RS24925 PF08443 RimK-like ATP-grasp domain D0853_RS24925 PF18030 RimK PreATP-grasp domain D0853_RS24930 PF08443 RimK-like ATP-grasp domain D0853_RS24930 PF18030 RimK PreATP-grasp domain D0853_RS24940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS24940 PF03466 LysR substrate binding domain D0853_RS24965 PF00232 Glycosyl hydrolase family 1 D0853_RS24975 PF00512 His Kinase A (phospho-acceptor) domain D0853_RS24975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D0853_RS24975 PF02743 Cache domain D0853_RS24980 PF00158 Sigma-54 interaction domain D0853_RS24980 PF02954 Bacterial regulatory protein, Fis family D0853_RS24980 PF00072 Response regulator receiver domain D0853_RS24985 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS24985 PF05230 MASE2 domain D0853_RS24990 PF05525 Branched-chain amino acid transport protein D0853_RS25015 PF01266 FAD dependent oxidoreductase D0853_RS25025 PF01212 Beta-eliminating lyase D0853_RS25045 PF01773 Na+ dependent nucleoside transporter N-terminus D0853_RS25045 PF07662 Na+ dependent nucleoside transporter C-terminus D0853_RS25045 PF07670 Nucleoside recognition D0853_RS25055 PF13532 2OG-Fe(II) oxygenase superfamily D0853_RS25060 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS25060 PF05230 MASE2 domain D0853_RS25065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D0853_RS25065 PF12729 Four helix bundle sensory module for signal transduction D0853_RS25065 PF00672 HAMP domain D0853_RS25080 PF00990 Diguanylate cyclase, GGDEF domain D0853_RS25085 PF03441 FAD binding domain of DNA photolyase D0853_RS25085 PF00875 DNA photolyase D0853_RS25090 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D0853_RS25095 PF00919 Uncharacterized protein family UPF0004 D0853_RS25095 PF04055 Radical SAM superfamily D0853_RS25105 PF01625 Peptide methionine sulfoxide reductase D0853_RS25105 PF01641 SelR domain D0853_RS25110 PF02566 OsmC-like protein D0853_RS25115 PF14602 Hexapeptide repeat of succinyl-transferase D0853_RS25115 PF12464 Maltose acetyltransferase D0853_RS25150 PF03466 LysR substrate binding domain D0853_RS25150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS25155 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS25170 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D0853_RS25175 PF00194 Eukaryotic-type carbonic anhydrase D0853_RS25180 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D0853_RS25185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D0853_RS25190 PF02687 FtsX-like permease family D0853_RS25190 PF12704 MacB-like periplasmic core domain D0853_RS25190 PF00005 ABC transporter D0853_RS25195 PF02321 Outer membrane efflux protein D0853_RS25200 PF00657 GDSL-like Lipase/Acylhydrolase D0853_RS25205 PF00082 Subtilase family D0853_RS25205 PF05922 Peptidase inhibitor I9 D0853_RS25215 PF03611 PTS system sugar-specific permease component D0853_RS25225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D0853_RS25230 PF00356 Bacterial regulatory proteins, lacI family D0853_RS25235 PF13419 Haloacid dehalogenase-like hydrolase D0853_RS25240 PF00202 Aminotransferase class-III D0853_RS25245 PF00266 Aminotransferase class-V D0853_RS25260 PF00005 ABC transporter D0853_RS25265 PF00528 Binding-protein-dependent transport system inner membrane component D0853_RS25270 PF07702 UTRA domain D0853_RS25270 PF00392 Bacterial regulatory proteins, gntR family D0853_RS25285 PF04393 Protein of unknown function (DUF535) D0853_RS25295 PF01266 FAD dependent oxidoreductase D0853_RS25300 PF00246 Zinc carboxypeptidase D0853_RS25300 PF18027 Cytosolic carboxypeptidase N-terminal domain D0853_RS25310 PF01389 OmpA-like transmembrane domain D0853_RS25310 PF00691 OmpA family D0853_RS25315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS25315 PF03466 LysR substrate binding domain D0853_RS25325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS25325 PF03466 LysR substrate binding domain D0853_RS25335 PF00854 POT family D0853_RS25340 PF03313 Serine dehydratase alpha chain D0853_RS25340 PF03315 Serine dehydratase beta chain D0853_RS25360 PF08264 Anticodon-binding domain of tRNA D0853_RS25360 PF00133 tRNA synthetases class I (I, L, M and V) D0853_RS25370 PF01464 Transglycosylase SLT domain D0853_RS25390 PF00460 Flagella basal body rod protein D0853_RS25395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS25395 PF00460 Flagella basal body rod protein D0853_RS25400 PF13861 FlgD Tudor-like domain D0853_RS25400 PF13860 FlgD Ig-like domain D0853_RS25400 PF03963 Flagellar hook capping protein - N-terminal region D0853_RS25405 PF00460 Flagella basal body rod protein D0853_RS25405 PF07559 Flagellar basal body protein FlaE D0853_RS25405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS25410 PF00460 Flagella basal body rod protein D0853_RS25410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS25415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS25415 PF00460 Flagella basal body rod protein D0853_RS25420 PF02107 Flagellar L-ring protein D0853_RS25425 PF02119 Flagellar P-ring protein D0853_RS25430 PF10135 Rod binding protein D0853_RS25430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D0853_RS25435 PF00460 Flagella basal body rod protein D0853_RS25435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D0853_RS25440 PF00669 Bacterial flagellin N-terminal helical region D0853_RS25460 PF01070 FMN-dependent dehydrogenase D0853_RS25490 PF00581 Rhodanese-like domain D0853_RS25500 PF00166 Chaperonin 10 Kd subunit D0853_RS25505 PF00118 TCP-1/cpn60 chaperonin family D0853_RS25520 PF01810 LysE type translocator D0853_RS25525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS25525 PF03466 LysR substrate binding domain D0853_RS25540 PF08359 YsiA-like protein, C-terminal region D0853_RS25540 PF00440 Bacterial regulatory proteins, tetR family D0853_RS25550 PF00149 Calcineurin-like phosphoesterase D0853_RS25550 PF02872 5'-nucleotidase, C-terminal domain D0853_RS25555 PF03060 Nitronate monooxygenase D0853_RS25570 PF03466 LysR substrate binding domain D0853_RS25570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D0853_RS25580 PF01625 Peptide methionine sulfoxide reductase D0853_RS25580 PF01641 SelR domain D0853_RS25585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D0853_RS25590 PF00455 DeoR C terminal sensor domain D0853_RS25590 PF08220 DeoR-like helix-turn-helix domain