locus-tag class description VSVS12_RS00010 PF01554 MatE VSVS12_RS00020 PF00717 Peptidase S24-like VSVS12_RS00020 PF01726 LexA DNA binding domain VSVS12_RS00025 PF01219 Prokaryotic diacylglycerol kinase VSVS12_RS00030 PF01553 Acyltransferase VSVS12_RS00035 PF01040 UbiA prenyltransferase family VSVS12_RS00040 PF04345 Chorismate lyase VSVS12_RS00045 PF03748 Flagellar basal body-associated protein FliL VSVS12_RS00050 PF01694 Rhomboid family VSVS12_RS00050 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VSVS12_RS00055 PF00581 Rhodanese-like domain VSVS12_RS00060 PF04542 Sigma-70 region 2 VSVS12_RS00060 PF00140 Sigma-70 factor, region 1.2 VSVS12_RS00060 PF04545 Sigma-70, region 4 VSVS12_RS00065 PF18075 FtsX extracellular domain VSVS12_RS00070 PF00005 ABC transporter VSVS12_RS00075 PF02881 SRP54-type protein, helical bundle domain VSVS12_RS00075 PF00448 SRP54-type protein, GTPase domain VSVS12_RS00090 PF01914 MarC family integral membrane protein VSVS12_RS00140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VSVS12_RS00140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSVS12_RS00145 PF01022 Bacterial regulatory protein, arsR family VSVS12_RS00150 PF00563 EAL domain VSVS12_RS00150 PF08668 HDOD domain VSVS12_RS00155 PF01810 LysE type translocator VSVS12_RS00160 PF12146 Serine aminopeptidase, S33 VSVS12_RS00175 PF03942 DTW domain VSVS12_RS00180 PF13419 Haloacid dehalogenase-like hydrolase VSVS12_RS00185 PF02899 Phage integrase, N-terminal SAM-like domain VSVS12_RS00185 PF00589 Phage integrase family VSVS12_RS00195 PF01678 Diaminopimelate epimerase VSVS12_RS00200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VSVS12_RS00200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VSVS12_RS00210 PF01491 Frataxin-like domain VSVS12_RS00215 PF01295 Adenylate cyclase, class-I VSVS12_RS00215 PF12633 Adenylate cyclase NT domain VSVS12_RS00220 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VSVS12_RS00220 PF03900 Porphobilinogen deaminase, C-terminal domain VSVS12_RS00225 PF02602 Uroporphyrinogen-III synthase HemD VSVS12_RS00230 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VSVS12_RS00235 PF07219 HemY protein N-terminus VSVS12_RS00310 PF00175 Oxidoreductase NAD-binding domain VSVS12_RS00320 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VSVS12_RS00330 PF07498 Rho termination factor, N-terminal domain VSVS12_RS00330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VSVS12_RS00330 PF07497 Rho termination factor, RNA-binding domain VSVS12_RS00335 PF00085 Thioredoxin VSVS12_RS00340 PF00270 DEAD/DEAH box helicase VSVS12_RS00340 PF00271 Helicase conserved C-terminal domain VSVS12_RS00345 PF02541 Ppx/GppA phosphatase family VSVS12_RS00350 PF02592 Putative vitamin uptake transporter VSVS12_RS00360 PF09382 RQC domain VSVS12_RS00360 PF00270 DEAD/DEAH box helicase VSVS12_RS00360 PF00271 Helicase conserved C-terminal domain VSVS12_RS00360 PF00570 HRDC domain VSVS12_RS00360 PF16124 RecQ zinc-binding VSVS12_RS00365 PF00892 EamA-like transporter family VSVS12_RS00370 PF12833 Helix-turn-helix domain VSVS12_RS00370 PF02311 AraC-like ligand binding domain VSVS12_RS00375 PF01810 LysE type translocator VSVS12_RS00380 PF13361 UvrD-like helicase C-terminal domain VSVS12_RS00380 PF00580 UvrD/REP helicase N-terminal domain VSVS12_RS00390 PF05114 Protein of unknown function (DUF692) VSVS12_RS00405 PF01432 Peptidase family M3 VSVS12_RS00410 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VSVS12_RS00415 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS00415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VSVS12_RS00430 PF00375 Sodium:dicarboxylate symporter family VSVS12_RS00435 PF01053 Cys/Met metabolism PLP-dependent enzyme VSVS12_RS00440 PF01042 Endoribonuclease L-PSP VSVS12_RS00445 PF02743 Cache domain VSVS12_RS00445 PF00672 HAMP domain VSVS12_RS00445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS00450 PF03793 PASTA domain VSVS12_RS00450 PF00069 Protein kinase domain VSVS12_RS00490 PF00884 Sulfatase VSVS12_RS00490 PF08019 Phosphoethanolamine transferase EptA/EptB VSVS12_RS00495 PF01219 Prokaryotic diacylglycerol kinase VSVS12_RS00500 PF12911 N-terminal TM domain of oligopeptide transport permease C VSVS12_RS00500 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS00505 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS00510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VSVS12_RS00515 PF00005 ABC transporter VSVS12_RS00515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VSVS12_RS00545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VSVS12_RS00550 PF00580 UvrD/REP helicase N-terminal domain VSVS12_RS00550 PF13361 UvrD-like helicase C-terminal domain VSVS12_RS00555 PF00440 Bacterial regulatory proteins, tetR family VSVS12_RS00560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VSVS12_RS00565 PF00873 AcrB/AcrD/AcrF family VSVS12_RS00570 PF04380 Membrane fusogenic activity VSVS12_RS00575 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VSVS12_RS00575 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VSVS12_RS00580 PF03466 LysR substrate binding domain VSVS12_RS00580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS00585 PF04055 Radical SAM superfamily VSVS12_RS00585 PF06969 HemN C-terminal domain VSVS12_RS00595 PF04220 Der GTPase activator (YihI) VSVS12_RS00610 PF00034 Cytochrome c VSVS12_RS00615 PF01926 50S ribosome-binding GTPase VSVS12_RS00620 PF01367 5'-3' exonuclease, C-terminal SAM fold VSVS12_RS00620 PF00476 DNA polymerase family A VSVS12_RS00620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VSVS12_RS00620 PF01612 3'-5' exonuclease VSVS12_RS00625 PF00490 Delta-aminolevulinic acid dehydratase VSVS12_RS00630 PF01026 TatD related DNase VSVS12_RS00635 PF00902 Sec-independent protein translocase protein (TatC) VSVS12_RS00640 PF02416 mttA/Hcf106 family VSVS12_RS00645 PF02416 mttA/Hcf106 family VSVS12_RS00650 PF03109 ABC1 family VSVS12_RS00655 PF02036 SCP-2 sterol transfer family VSVS12_RS00660 PF01209 ubiE/COQ5 methyltransferase family VSVS12_RS00665 PF02646 RmuC family VSVS12_RS00675 PF01081 KDPG and KHG aldolase VSVS12_RS00680 PF02447 GntP family permease VSVS12_RS00685 PF01202 Shikimate kinase VSVS12_RS00690 PF00920 Dehydratase family VSVS12_RS00695 PF00356 Bacterial regulatory proteins, lacI family VSVS12_RS00695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VSVS12_RS00710 PF06114 IrrE N-terminal-like domain VSVS12_RS00730 PF13401 AAA domain VSVS12_RS00730 PF11426 Tn7 transposition regulator TnsC VSVS12_RS00750 PF10625 Universal stress protein B (UspB) VSVS12_RS00755 PF00210 Ferritin-like domain VSVS12_RS00760 PF00582 Universal stress protein family VSVS12_RS00765 PF00892 EamA-like transporter family VSVS12_RS00770 PF04445 Putative SAM-dependent methyltransferase VSVS12_RS00775 PF08448 PAS fold VSVS12_RS00775 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS00775 PF00563 EAL domain VSVS12_RS00780 PF01037 Lrp/AsnC ligand binding domain VSVS12_RS00790 PF07690 Major Facilitator Superfamily VSVS12_RS00795 PF03466 LysR substrate binding domain VSVS12_RS00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS00800 PF00557 Metallopeptidase family M24 VSVS12_RS00800 PF01321 Creatinase/Prolidase N-terminal domain VSVS12_RS00800 PF00557 Metallopeptidase family M24 VSVS12_RS00800 PF01321 Creatinase/Prolidase N-terminal domain VSVS12_RS00805 PF06968 Biotin and Thiamin Synthesis associated domain VSVS12_RS00805 PF04055 Radical SAM superfamily VSVS12_RS00810 PF05690 Thiazole biosynthesis protein ThiG VSVS12_RS00815 PF02597 ThiS family VSVS12_RS00820 PF00899 ThiF family VSVS12_RS00825 PF02581 Thiamine monophosphate synthase VSVS12_RS00830 PF13667 ThiC-associated domain VSVS12_RS00830 PF01964 Radical SAM ThiC family VSVS12_RS00835 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VSVS12_RS00900 PF12724 Flavodoxin domain VSVS12_RS00905 PF02386 Cation transport protein VSVS12_RS00910 PF09186 Domain of unknown function (DUF1949) VSVS12_RS00910 PF01205 Uncharacterized protein family UPF0029 VSVS12_RS00915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VSVS12_RS00915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VSVS12_RS00915 PF00378 Enoyl-CoA hydratase/isomerase VSVS12_RS00920 PF00108 Thiolase, N-terminal domain VSVS12_RS00920 PF02803 Thiolase, C-terminal domain VSVS12_RS00925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS00925 PF03466 LysR substrate binding domain VSVS12_RS00930 PF07690 Major Facilitator Superfamily VSVS12_RS00935 PF00132 Bacterial transferase hexapeptide (six repeats) VSVS12_RS00935 PF12804 MobA-like NTP transferase domain VSVS12_RS00940 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VSVS12_RS00940 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VSVS12_RS00945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VSVS12_RS00945 PF02874 ATP synthase alpha/beta family, beta-barrel domain VSVS12_RS00950 PF00231 ATP synthase VSVS12_RS00955 PF02874 ATP synthase alpha/beta family, beta-barrel domain VSVS12_RS00955 PF00306 ATP synthase alpha/beta chain, C terminal domain VSVS12_RS00955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VSVS12_RS00960 PF00213 ATP synthase delta (OSCP) subunit VSVS12_RS00965 PF00430 ATP synthase B/B' CF(0) VSVS12_RS00970 PF00137 ATP synthase subunit C VSVS12_RS00975 PF00119 ATP synthase A chain VSVS12_RS00980 PF03899 ATP synthase I chain VSVS12_RS00985 PF17762 HTH domain found in ParB protein VSVS12_RS00985 PF02195 ParB-like nuclease domain VSVS12_RS00990 PF13614 AAA domain VSVS12_RS00995 PF02527 rRNA small subunit methyltransferase G VSVS12_RS01000 PF13932 GidA associated domain VSVS12_RS01000 PF01134 Glucose inhibited division protein A VSVS12_RS01005 PF00258 Flavodoxin VSVS12_RS01010 PF12631 MnmE helical domain VSVS12_RS01010 PF10396 GTP-binding protein TrmE N-terminus VSVS12_RS01010 PF01926 50S ribosome-binding GTPase VSVS12_RS01015 PF02096 60Kd inner membrane protein VSVS12_RS01015 PF14849 YidC periplasmic domain VSVS12_RS01020 PF00825 Ribonuclease P VSVS12_RS01025 PF00468 Ribosomal protein L34 VSVS12_RS01030 PF00005 ABC transporter VSVS12_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS01040 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS01045 PF11638 DnaA N-terminal domain VSVS12_RS01045 PF08299 Bacterial dnaA protein helix-turn-helix VSVS12_RS01045 PF00308 Bacterial dnaA protein VSVS12_RS01050 PF00712 DNA polymerase III beta subunit, N-terminal domain VSVS12_RS01050 PF02767 DNA polymerase III beta subunit, central domain VSVS12_RS01050 PF02768 DNA polymerase III beta subunit, C-terminal domain VSVS12_RS01055 PF02463 RecF/RecN/SMC N terminal domain VSVS12_RS01060 PF01751 Toprim domain VSVS12_RS01060 PF00204 DNA gyrase B VSVS12_RS01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS01060 PF00986 DNA gyrase B subunit, carboxyl terminus VSVS12_RS01060 PF18053 DNA gyrase B subunit insert domain VSVS12_RS01065 PF00011 Hsp20/alpha crystallin family VSVS12_RS01070 PF00155 Aminotransferase class I and II VSVS12_RS01075 PF05746 DALR anticodon binding domain VSVS12_RS01075 PF02092 Glycyl-tRNA synthetase beta subunit VSVS12_RS01080 PF02091 Glycyl-tRNA synthetase alpha subunit VSVS12_RS01085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VSVS12_RS01095 PF01206 Sulfurtransferase TusA VSVS12_RS01100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS01100 PF03466 LysR substrate binding domain VSVS12_RS01105 PF00107 Zinc-binding dehydrogenase VSVS12_RS01105 PF08240 Alcohol dehydrogenase GroES-like domain VSVS12_RS01110 PF00291 Pyridoxal-phosphate dependent enzyme VSVS12_RS01110 PF00585 C-terminal regulatory domain of Threonine dehydratase VSVS12_RS01115 PF00920 Dehydratase family VSVS12_RS01120 PF01063 Amino-transferase class IV VSVS12_RS01130 PF00205 Thiamine pyrophosphate enzyme, central domain VSVS12_RS01130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VSVS12_RS01130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VSVS12_RS01135 PF13335 Magnesium chelatase, subunit ChlI C-terminal VSVS12_RS01135 PF01078 Magnesium chelatase, subunit ChlI VSVS12_RS01170 PF01078 Magnesium chelatase, subunit ChlI VSVS12_RS01170 PF13335 Magnesium chelatase, subunit ChlI C-terminal VSVS12_RS01210 PF13335 Magnesium chelatase, subunit ChlI C-terminal VSVS12_RS01210 PF01078 Magnesium chelatase, subunit ChlI VSVS12_RS01220 PF01323 DSBA-like thioredoxin domain VSVS12_RS01225 PF01636 Phosphotransferase enzyme family VSVS12_RS01230 PF13746 4Fe-4S dicluster domain VSVS12_RS01230 PF12801 4Fe-4S binding domain VSVS12_RS01230 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VSVS12_RS01235 PF06288 Protein of unknown function (DUF1040) VSVS12_RS01240 PF07070 SpoOM protein VSVS12_RS01245 PF03006 Haemolysin-III related VSVS12_RS01250 PF02386 Cation transport protein VSVS12_RS01255 PF02254 TrkA-N domain VSVS12_RS01255 PF02080 TrkA-C domain VSVS12_RS01260 PF01189 16S rRNA methyltransferase RsmB/F VSVS12_RS01260 PF01029 NusB family VSVS12_RS01265 PF00551 Formyl transferase VSVS12_RS01265 PF02911 Formyl transferase, C-terminal domain VSVS12_RS01270 PF01327 Polypeptide deformylase VSVS12_RS01280 PF17782 DprA winged helix domain VSVS12_RS01280 PF02481 DNA recombination-mediator protein A VSVS12_RS01285 PF04361 Protein of unknown function (DUF494) VSVS12_RS01300 PF00731 AIR carboxylase VSVS12_RS01305 PF01300 Telomere recombination VSVS12_RS01310 PF01218 Coproporphyrinogen III oxidase VSVS12_RS01315 PF01488 Shikimate / quinate 5-dehydrogenase VSVS12_RS01315 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VSVS12_RS01315 PF08501 Shikimate dehydrogenase substrate binding domain VSVS12_RS01320 PF07369 Protein of unknown function (DUF1488) VSVS12_RS01325 PF00132 Bacterial transferase hexapeptide (six repeats) VSVS12_RS01365 PF00962 Adenosine/AMP deaminase VSVS12_RS01370 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS01370 PF03707 Bacterial signalling protein N terminal repeat VSVS12_RS01370 PF00563 EAL domain VSVS12_RS01370 PF13188 PAS domain VSVS12_RS01375 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS01375 PF00158 Sigma-54 interaction domain VSVS12_RS01375 PF00072 Response regulator receiver domain VSVS12_RS01380 PF00989 PAS fold VSVS12_RS01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS01380 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS01385 PF00120 Glutamine synthetase, catalytic domain VSVS12_RS01385 PF03951 Glutamine synthetase, beta-Grasp domain VSVS12_RS01390 PF00679 Elongation factor G C-terminus VSVS12_RS01390 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS01390 PF03144 Elongation factor Tu domain 2 VSVS12_RS01405 PF03631 Virulence factor BrkB VSVS12_RS01410 PF02580 D-Tyr-tRNA(Tyr) deacylase VSVS12_RS01415 PF00583 Acetyltransferase (GNAT) family VSVS12_RS01415 PF09500 Putative thioesterase (yiiD_Cterm) VSVS12_RS01425 PF01293 Phosphoenolpyruvate carboxykinase VSVS12_RS01430 PF01430 Hsp33 protein VSVS12_RS01435 PF01479 S4 domain VSVS12_RS01440 PF11356 Type II secretion system protein C VSVS12_RS01445 PF00263 Bacterial type II and III secretion system protein VSVS12_RS01445 PF03958 Bacterial type II/III secretion system short domain VSVS12_RS01450 PF00437 Type II/IV secretion system protein VSVS12_RS01455 PF00482 Type II secretion system (T2SS), protein F VSVS12_RS01460 PF08334 Type II secretion system (T2SS), protein G VSVS12_RS01460 PF07963 Prokaryotic N-terminal methylation motif VSVS12_RS01465 PF12019 Type II transport protein GspH VSVS12_RS01470 PF07963 Prokaryotic N-terminal methylation motif VSVS12_RS01470 PF02501 Type II secretion system (T2SS), protein I VSVS12_RS01475 PF07963 Prokaryotic N-terminal methylation motif VSVS12_RS01475 PF11612 Type II secretion system (T2SS), protein J VSVS12_RS01480 PF03934 Type II secretion system (T2SS), protein K VSVS12_RS01485 PF05134 Type II secretion system (T2SS), protein L VSVS12_RS01485 PF12693 GspL periplasmic domain VSVS12_RS01490 PF04612 Type II secretion system (T2SS), protein M VSVS12_RS01495 PF01203 Type II secretion system (T2SS), protein N VSVS12_RS01500 PF00672 HAMP domain VSVS12_RS01500 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS01505 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS01505 PF00072 Response regulator receiver domain VSVS12_RS01510 PF03449 Transcription elongation factor, N-terminal VSVS12_RS01510 PF01272 Transcription elongation factor, GreA/GreB, C-term VSVS12_RS01515 PF02627 Carboxymuconolactone decarboxylase family VSVS12_RS01520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS01520 PF03466 LysR substrate binding domain VSVS12_RS01525 PF00575 S1 RNA binding domain VSVS12_RS01525 PF16921 Tex protein YqgF-like domain VSVS12_RS01525 PF09371 Tex-like protein N-terminal domain VSVS12_RS01525 PF17674 HHH domain VSVS12_RS01535 PF00561 alpha/beta hydrolase fold VSVS12_RS01540 PF00156 Phosphoribosyl transferase domain VSVS12_RS01545 PF01521 Iron-sulphur cluster biosynthesis VSVS12_RS01545 PF01106 NifU-like domain VSVS12_RS01550 PF00293 NUDIX domain VSVS12_RS01555 PF00459 Inositol monophosphatase family VSVS12_RS01560 PF02838 Glycosyl hydrolase family 20, domain 2 VSVS12_RS01560 PF00728 Glycosyl hydrolase family 20, catalytic domain VSVS12_RS01560 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VSVS12_RS01560 PF03173 Putative carbohydrate binding domain VSVS12_RS01565 PF17191 RecG wedge domain VSVS12_RS01565 PF00271 Helicase conserved C-terminal domain VSVS12_RS01565 PF00270 DEAD/DEAH box helicase VSVS12_RS01570 PF12105 SpoU, rRNA methylase, C-terminal VSVS12_RS01570 PF00588 SpoU rRNA Methylase family VSVS12_RS01575 PF13291 ACT domain VSVS12_RS01575 PF04607 Region found in RelA / SpoT proteins VSVS12_RS01575 PF02824 TGS domain VSVS12_RS01580 PF01192 RNA polymerase Rpb6 VSVS12_RS01585 PF00625 Guanylate kinase VSVS12_RS01595 PF00860 Permease family VSVS12_RS01605 PF08543 Phosphomethylpyrimidine kinase VSVS12_RS01610 PF03755 YicC-like family, N-terminal region VSVS12_RS01610 PF08340 Domain of unknown function (DUF1732) VSVS12_RS01615 PF01138 3' exoribonuclease family, domain 1 VSVS12_RS01615 PF03725 3' exoribonuclease family, domain 2 VSVS12_RS01620 PF00156 Phosphoribosyl transferase domain VSVS12_RS01625 PF03279 Bacterial lipid A biosynthesis acyltransferase VSVS12_RS01630 PF00440 Bacterial regulatory proteins, tetR family VSVS12_RS01635 PF02441 Flavoprotein VSVS12_RS01635 PF04127 DNA / pantothenate metabolism flavoprotein VSVS12_RS01640 PF17200 Single Cache domain 2 VSVS12_RS01640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS01640 PF00672 HAMP domain VSVS12_RS01645 PF04002 RadC-like JAB domain VSVS12_RS01650 PF00830 Ribosomal L28 family VSVS12_RS01655 PF00471 Ribosomal protein L33 VSVS12_RS01665 PF06827 Zinc finger found in FPG and IleRS VSVS12_RS01665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VSVS12_RS01665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VSVS12_RS01670 PF01467 Cytidylyltransferase-like VSVS12_RS01675 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VSVS12_RS01680 PF00535 Glycosyl transferase family 2 VSVS12_RS01685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VSVS12_RS01690 PF01219 Prokaryotic diacylglycerol kinase VSVS12_RS01700 PF00884 Sulfatase VSVS12_RS01700 PF11893 Domain of unknown function (DUF3413) VSVS12_RS01710 PF02719 Polysaccharide biosynthesis protein VSVS12_RS01715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VSVS12_RS01725 PF00117 Glutamine amidotransferase class-I VSVS12_RS01730 PF00977 Histidine biosynthesis protein VSVS12_RS01735 PF02348 Cytidylyltransferase VSVS12_RS01745 PF03102 NeuB family VSVS12_RS01745 PF08666 SAF domain VSVS12_RS01755 PF00534 Glycosyl transferases group 1 VSVS12_RS01755 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VSVS12_RS01760 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VSVS12_RS01765 PF03279 Bacterial lipid A biosynthesis acyltransferase VSVS12_RS01770 PF01370 NAD dependent epimerase/dehydratase family VSVS12_RS01775 PF13091 PLD-like domain VSVS12_RS01785 PF01565 FAD binding domain VSVS12_RS01785 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VSVS12_RS01790 PF08279 HTH domain VSVS12_RS01790 PF03099 Biotin/lipoate A/B protein ligase family VSVS12_RS01790 PF02237 Biotin protein ligase C terminal domain VSVS12_RS01800 PF00166 Chaperonin 10 Kd subunit VSVS12_RS01805 PF00118 TCP-1/cpn60 chaperonin family VSVS12_RS01810 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS01810 PF05230 MASE2 domain VSVS12_RS01815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VSVS12_RS01820 PF06005 Cell division protein ZapB VSVS12_RS01825 PF02219 Methylenetetrahydrofolate reductase VSVS12_RS01830 PF00696 Amino acid kinase family VSVS12_RS01830 PF03447 Homoserine dehydrogenase, NAD binding domain VSVS12_RS01830 PF00742 Homoserine dehydrogenase VSVS12_RS01835 PF01053 Cys/Met metabolism PLP-dependent enzyme VSVS12_RS01840 PF01340 Met Apo-repressor, MetJ VSVS12_RS01845 PF00390 Malic enzyme, N-terminal domain VSVS12_RS01845 PF03949 Malic enzyme, NAD binding domain VSVS12_RS01850 PF01197 Ribosomal protein L31 VSVS12_RS01855 PF18074 Primosomal protein N C-terminal domain VSVS12_RS01855 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VSVS12_RS01855 PF17764 3′ DNA-binding domain (3′BD) VSVS12_RS01855 PF00271 Helicase conserved C-terminal domain VSVS12_RS01855 PF00270 DEAD/DEAH box helicase VSVS12_RS01860 PF00356 Bacterial regulatory proteins, lacI family VSVS12_RS01865 PF05036 Sporulation related domain VSVS12_RS01870 PF02357 Transcription termination factor nusG VSVS12_RS01875 PF02350 UDP-N-acetylglucosamine 2-epimerase VSVS12_RS01880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VSVS12_RS01880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VSVS12_RS01880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VSVS12_RS01885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VSVS12_RS01885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VSVS12_RS01885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VSVS12_RS01890 PF01370 NAD dependent epimerase/dehydratase family VSVS12_RS01915 PF00132 Bacterial transferase hexapeptide (six repeats) VSVS12_RS01925 PF00795 Carbon-nitrogen hydrolase VSVS12_RS01925 PF02540 NAD synthase VSVS12_RS01930 PF00117 Glutamine amidotransferase class-I VSVS12_RS01935 PF00977 Histidine biosynthesis protein VSVS12_RS01940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VSVS12_RS01940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VSVS12_RS01955 PF01370 NAD dependent epimerase/dehydratase family VSVS12_RS01960 PF02397 Bacterial sugar transferase VSVS12_RS01965 PF02719 Polysaccharide biosynthesis protein VSVS12_RS01970 PF16363 GDP-mannose 4,6 dehydratase VSVS12_RS02025 PF06082 Exopolysaccharide biosynthesis protein YbjH VSVS12_RS02035 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF VSVS12_RS02045 PF00227 Proteasome subunit VSVS12_RS02050 PF07724 AAA domain (Cdc48 subfamily) VSVS12_RS02050 PF00004 ATPase family associated with various cellular activities (AAA) VSVS12_RS02055 PF02313 Fumarate reductase subunit D VSVS12_RS02060 PF02300 Fumarate reductase subunit C VSVS12_RS02065 PF13085 2Fe-2S iron-sulfur cluster binding domain VSVS12_RS02065 PF13183 4Fe-4S dicluster domain VSVS12_RS02070 PF02910 Fumarate reductase flavoprotein C-term VSVS12_RS02070 PF00890 FAD binding domain VSVS12_RS02075 PF00152 tRNA synthetases class II (D, K and N) VSVS12_RS02085 PF00581 Rhodanese-like domain VSVS12_RS02090 PF02556 Preprotein translocase subunit SecB VSVS12_RS02095 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VSVS12_RS02095 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VSVS12_RS02100 PF06426 Serine acetyltransferase, N-terminal VSVS12_RS02100 PF00132 Bacterial transferase hexapeptide (six repeats) VSVS12_RS02110 PF00311 Phosphoenolpyruvate carboxylase VSVS12_RS02115 PF07687 Peptidase dimerisation domain VSVS12_RS02115 PF01546 Peptidase family M20/M25/M40 VSVS12_RS02120 PF01118 Semialdehyde dehydrogenase, NAD binding domain VSVS12_RS02120 PF02774 Semialdehyde dehydrogenase, dimerisation domain VSVS12_RS02125 PF00696 Amino acid kinase family VSVS12_RS02130 PF00764 Arginosuccinate synthase VSVS12_RS02135 PF14698 Argininosuccinate lyase C-terminal VSVS12_RS02135 PF00583 Acetyltransferase (GNAT) family VSVS12_RS02135 PF00206 Lyase VSVS12_RS02150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VSVS12_RS02150 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS02155 PF08534 Redoxin VSVS12_RS02155 PF00462 Glutaredoxin VSVS12_RS02160 PF03466 LysR substrate binding domain VSVS12_RS02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS02165 PF13542 Helix-turn-helix domain of transposase family ISL3 VSVS12_RS02165 PF01610 Transposase VSVS12_RS02165 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VSVS12_RS02170 PF13542 Helix-turn-helix domain of transposase family ISL3 VSVS12_RS02170 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VSVS12_RS02170 PF01610 Transposase VSVS12_RS02175 PF17092 Penicillin-binding protein OB-like domain VSVS12_RS02175 PF00912 Transglycosylase VSVS12_RS02175 PF00905 Penicillin binding protein transpeptidase domain VSVS12_RS02200 PF07660 Secretin and TonB N terminus short domain VSVS12_RS02200 PF03958 Bacterial type II/III secretion system short domain VSVS12_RS02200 PF00263 Bacterial type II and III secretion system protein VSVS12_RS02200 PF11741 AMIN domain VSVS12_RS02205 PF01202 Shikimate kinase VSVS12_RS02210 PF01761 3-dehydroquinate synthase VSVS12_RS02220 PF02086 D12 class N6 adenine-specific DNA methyltransferase VSVS12_RS02225 PF00834 Ribulose-phosphate 3 epimerase family VSVS12_RS02230 PF13419 Haloacid dehalogenase-like hydrolase VSVS12_RS02235 PF00579 tRNA synthetases class I (W and Y) VSVS12_RS02240 PF00117 Glutamine amidotransferase class-I VSVS12_RS02245 PF00202 Aminotransferase class-III VSVS12_RS02250 PF04958 Arginine N-succinyltransferase beta subunit VSVS12_RS02255 PF00171 Aldehyde dehydrogenase family VSVS12_RS02265 PF13545 Crp-like helix-turn-helix domain VSVS12_RS02265 PF00027 Cyclic nucleotide-binding domain VSVS12_RS02270 PF00485 Phosphoribulokinase / Uridine kinase family VSVS12_RS02275 PF06794 Uncharacterised protein family (UPF0270) VSVS12_RS02280 PF00561 alpha/beta hydrolase fold VSVS12_RS02290 PF12848 ABC transporter VSVS12_RS02290 PF00005 ABC transporter VSVS12_RS02295 PF02525 Flavodoxin-like fold VSVS12_RS02300 PF00999 Sodium/hydrogen exchanger family VSVS12_RS02300 PF02254 TrkA-N domain VSVS12_RS02305 PF09526 Probable metal-binding protein (DUF2387) VSVS12_RS02310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VSVS12_RS02315 PF01112 Asparaginase VSVS12_RS02320 PF00709 Adenylosuccinate synthetase VSVS12_RS02325 PF08238 Sel1 repeat VSVS12_RS02330 PF01979 Amidohydrolase family VSVS12_RS02335 PF00575 S1 RNA binding domain VSVS12_RS02335 PF00773 RNB domain VSVS12_RS02335 PF08206 Ribonuclease B OB domain VSVS12_RS02335 PF08461 Ribonuclease R winged-helix domain VSVS12_RS02335 PF17876 Cold shock domain VSVS12_RS02340 PF08032 RNA 2'-O ribose methyltransferase substrate binding VSVS12_RS02340 PF00588 SpoU rRNA Methylase family VSVS12_RS02345 PF00338 Ribosomal protein S10p/S20e VSVS12_RS02350 PF00297 Ribosomal protein L3 VSVS12_RS02355 PF00573 Ribosomal protein L4/L1 family VSVS12_RS02360 PF00276 Ribosomal protein L23 VSVS12_RS02365 PF03947 Ribosomal Proteins L2, C-terminal domain VSVS12_RS02365 PF00181 Ribosomal Proteins L2, RNA binding domain VSVS12_RS02370 PF00203 Ribosomal protein S19 VSVS12_RS02375 PF00237 Ribosomal protein L22p/L17e VSVS12_RS02380 PF00189 Ribosomal protein S3, C-terminal domain VSVS12_RS02380 PF07650 KH domain VSVS12_RS02385 PF00252 Ribosomal protein L16p/L10e VSVS12_RS02390 PF00831 Ribosomal L29 protein VSVS12_RS02395 PF00366 Ribosomal protein S17 VSVS12_RS02400 PF00238 Ribosomal protein L14p/L23e VSVS12_RS02405 PF00467 KOW motif VSVS12_RS02405 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VSVS12_RS02410 PF00673 ribosomal L5P family C-terminus VSVS12_RS02410 PF00281 Ribosomal protein L5 VSVS12_RS02415 PF00253 Ribosomal protein S14p/S29e VSVS12_RS02420 PF00410 Ribosomal protein S8 VSVS12_RS02425 PF00347 Ribosomal protein L6 VSVS12_RS02430 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VSVS12_RS02435 PF03719 Ribosomal protein S5, C-terminal domain VSVS12_RS02435 PF00333 Ribosomal protein S5, N-terminal domain VSVS12_RS02440 PF00327 Ribosomal protein L30p/L7e VSVS12_RS02445 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VSVS12_RS02450 PF00344 SecY translocase VSVS12_RS02455 PF00444 Ribosomal protein L36 VSVS12_RS02460 PF00416 Ribosomal protein S13/S18 VSVS12_RS02465 PF00411 Ribosomal protein S11 VSVS12_RS02470 PF00163 Ribosomal protein S4/S9 N-terminal domain VSVS12_RS02470 PF01479 S4 domain VSVS12_RS02475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VSVS12_RS02475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VSVS12_RS02475 PF01000 RNA polymerase Rpb3/RpoA insert domain VSVS12_RS02480 PF01196 Ribosomal protein L17 VSVS12_RS02490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VSVS12_RS02490 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VSVS12_RS02505 PF13673 Acetyltransferase (GNAT) domain VSVS12_RS02515 PF02872 5'-nucleotidase, C-terminal domain VSVS12_RS02515 PF00149 Calcineurin-like phosphoesterase VSVS12_RS02520 PF10414 Sirohaem synthase dimerisation region VSVS12_RS02520 PF14824 Sirohaem biosynthesis protein central VSVS12_RS02520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VSVS12_RS02525 PF01507 Phosphoadenosine phosphosulfate reductase family VSVS12_RS02530 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS02535 PF02080 TrkA-C domain VSVS12_RS02535 PF03600 Citrate transporter VSVS12_RS02550 PF01475 Ferric uptake regulator family VSVS12_RS02555 PF01207 Dihydrouridine synthase (Dus) VSVS12_RS02575 PF00667 FAD binding domain VSVS12_RS02575 PF00175 Oxidoreductase NAD-binding domain VSVS12_RS02575 PF00258 Flavodoxin VSVS12_RS02580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VSVS12_RS02580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VSVS12_RS02585 PF01507 Phosphoadenosine phosphosulfate reductase family VSVS12_RS02655 PF00999 Sodium/hydrogen exchanger family VSVS12_RS02660 PF02965 Vitamin B12 dependent methionine synthase, activation domain VSVS12_RS02660 PF02607 B12 binding domain VSVS12_RS02660 PF00809 Pterin binding enzyme VSVS12_RS02660 PF02574 Homocysteine S-methyltransferase VSVS12_RS02660 PF02310 B12 binding domain VSVS12_RS02665 PF03448 MgtE intracellular N domain VSVS12_RS02665 PF01769 Divalent cation transporter VSVS12_RS02665 PF00571 CBS domain VSVS12_RS02670 PF00381 PTS HPr component phosphorylation site VSVS12_RS02675 PF03668 P-loop ATPase protein family VSVS12_RS02680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VSVS12_RS02685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VSVS12_RS02690 PF00309 Sigma-54 factor, Activator interacting domain (AID) VSVS12_RS02690 PF04552 Sigma-54, DNA binding domain VSVS12_RS02690 PF04963 Sigma-54 factor, core binding domain VSVS12_RS02695 PF00005 ABC transporter VSVS12_RS02695 PF12399 Branched-chain amino acid ATP-binding cassette transporter VSVS12_RS02700 PF03968 OstA-like protein VSVS12_RS02715 PF01380 SIS domain VSVS12_RS02715 PF00571 CBS domain VSVS12_RS02720 PF01699 Sodium/calcium exchanger protein VSVS12_RS02725 PF00005 ABC transporter VSVS12_RS02730 PF02405 Permease MlaE VSVS12_RS02735 PF02470 MlaD protein VSVS12_RS02740 PF05494 MlaC protein VSVS12_RS02750 PF01722 BolA-like protein VSVS12_RS02755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VSVS12_RS02760 PF01553 Acyltransferase VSVS12_RS02795 PF00672 HAMP domain VSVS12_RS02795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS02795 PF17200 Single Cache domain 2 VSVS12_RS02820 PF01464 Transglycosylase SLT domain VSVS12_RS02820 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VSVS12_RS02825 PF04362 Bacterial Fe(2+) trafficking VSVS12_RS02830 PF00730 HhH-GPD superfamily base excision DNA repair protein VSVS12_RS02830 PF00633 Helix-hairpin-helix motif VSVS12_RS02830 PF14815 NUDIX domain VSVS12_RS02835 PF02390 Putative methyltransferase VSVS12_RS02840 PF04960 Glutaminase VSVS12_RS02845 PF04055 Radical SAM superfamily VSVS12_RS02845 PF06969 HemN C-terminal domain VSVS12_RS02850 PF01725 Ham1 family VSVS12_RS02860 PF02594 Uncharacterised ACR, YggU family COG1872 VSVS12_RS02865 PF02325 YGGT family VSVS12_RS02870 PF03807 NADP oxidoreductase coenzyme F420-dependent VSVS12_RS02870 PF14748 Pyrroline-5-carboxylate reductase dimerisation VSVS12_RS02875 PF01168 Alanine racemase, N-terminal domain VSVS12_RS02880 PF00437 Type II/IV secretion system protein VSVS12_RS02885 PF00437 Type II/IV secretion system protein VSVS12_RS02890 PF00696 Amino acid kinase family VSVS12_RS02890 PF01842 ACT domain VSVS12_RS02895 PF00266 Aminotransferase class-V VSVS12_RS02905 PF00005 ABC transporter VSVS12_RS02905 PF17755 UvrA DNA-binding domain VSVS12_RS02905 PF17760 UvrA interaction domain VSVS12_RS02910 PF00483 Nucleotidyl transferase VSVS12_RS02915 PF00196 Bacterial regulatory proteins, luxR family VSVS12_RS02920 PF00436 Single-strand binding protein family VSVS12_RS02925 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS02925 PF17157 Gammaproteobacterial periplasmic sensor domain VSVS12_RS02925 PF00563 EAL domain VSVS12_RS02945 PF00263 Bacterial type II and III secretion system protein VSVS12_RS02945 PF03958 Bacterial type II/III secretion system short domain VSVS12_RS02950 PF13401 AAA domain VSVS12_RS02950 PF01471 Putative peptidoglycan binding domain VSVS12_RS02960 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VSVS12_RS02960 PF00437 Type II/IV secretion system protein VSVS12_RS02975 PF00482 Type II secretion system (T2SS), protein F VSVS12_RS02985 PF07963 Prokaryotic N-terminal methylation motif VSVS12_RS02990 PF07963 Prokaryotic N-terminal methylation motif VSVS12_RS03030 PF04085 rod shape-determining protein MreC VSVS12_RS03035 PF04093 rod shape-determining protein MreD VSVS12_RS03040 PF02545 Maf-like protein VSVS12_RS03045 PF10150 Ribonuclease E/G family VSVS12_RS03045 PF00575 S1 RNA binding domain VSVS12_RS03055 PF00795 Carbon-nitrogen hydrolase VSVS12_RS03060 PF01523 Putative modulator of DNA gyrase VSVS12_RS03070 PF06877 Regulator of ribonuclease activity B VSVS12_RS03120 PF00582 Universal stress protein family VSVS12_RS03135 PF01316 Arginine repressor, DNA binding domain VSVS12_RS03135 PF02863 Arginine repressor, C-terminal domain VSVS12_RS03140 PF00056 lactate/malate dehydrogenase, NAD binding domain VSVS12_RS03140 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VSVS12_RS03150 PF00348 Polyprenyl synthetase VSVS12_RS03155 PF00829 Ribosomal prokaryotic L21 protein VSVS12_RS03160 PF01016 Ribosomal L27 protein VSVS12_RS03165 PF01018 GTP1/OBG VSVS12_RS03165 PF01926 50S ribosome-binding GTPase VSVS12_RS03170 PF06738 Putative threonine/serine exporter VSVS12_RS03175 PF12821 Threonine/Serine exporter, ThrE VSVS12_RS03180 PF00186 Dihydrofolate reductase VSVS12_RS03185 PF00149 Calcineurin-like phosphoesterase VSVS12_RS03190 PF04379 ApaG domain VSVS12_RS03195 PF00398 Ribosomal RNA adenine dimethylase VSVS12_RS03200 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VSVS12_RS03205 PF09312 SurA N-terminal domain VSVS12_RS03210 PF03968 OstA-like protein VSVS12_RS03210 PF04453 LPS transport system D VSVS12_RS03215 PF05099 Tellurite resistance protein TerB VSVS12_RS03215 PF00226 DnaJ domain VSVS12_RS03220 PF01042 Endoribonuclease L-PSP VSVS12_RS03225 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VSVS12_RS03225 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VSVS12_RS03230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VSVS12_RS03230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VSVS12_RS03235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VSVS12_RS03235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VSVS12_RS03240 PF13638 PIN domain VSVS12_RS03240 PF02562 PhoH-like protein VSVS12_RS03245 PF00271 Helicase conserved C-terminal domain VSVS12_RS03245 PF12137 RNA polymerase recycling family C-terminal VSVS12_RS03245 PF00176 SNF2 family N-terminal domain VSVS12_RS03245 PF18337 RapA N-terminal Tudor like domain VSVS12_RS03245 PF18339 RapA N-terminal Tudor like domain 1 VSVS12_RS03255 PF00849 RNA pseudouridylate synthase VSVS12_RS03260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VSVS12_RS03260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VSVS12_RS03265 PF00133 tRNA synthetases class I (I, L, M and V) VSVS12_RS03265 PF10458 Valyl tRNA synthetase tRNA binding arm VSVS12_RS03265 PF08264 Anticodon-binding domain of tRNA VSVS12_RS03270 PF04364 DNA polymerase III chi subunit, HolC VSVS12_RS03275 PF02789 Cytosol aminopeptidase family, N-terminal domain VSVS12_RS03275 PF00883 Cytosol aminopeptidase family, catalytic domain VSVS12_RS03280 PF03739 Lipopolysaccharide export system permease LptF/LptG VSVS12_RS03285 PF03739 Lipopolysaccharide export system permease LptF/LptG VSVS12_RS03290 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VSVS12_RS03290 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VSVS12_RS03295 PF01510 N-acetylmuramoyl-L-alanine amidase VSVS12_RS03300 PF00258 Flavodoxin VSVS12_RS03305 PF00589 Phage integrase family VSVS12_RS03305 PF02899 Phage integrase, N-terminal SAM-like domain VSVS12_RS03310 PF13098 Thioredoxin-like domain VSVS12_RS03310 PF10411 Disulfide bond isomerase protein N-terminus VSVS12_RS03315 PF02272 DHHA1 domain VSVS12_RS03315 PF01368 DHH family VSVS12_RS03315 PF17768 RecJ OB domain VSVS12_RS03320 PF07729 FCD domain VSVS12_RS03320 PF00392 Bacterial regulatory proteins, gntR family VSVS12_RS03325 PF17831 Pyruvate dehydrogenase E1 component middle domain VSVS12_RS03325 PF00456 Transketolase, thiamine diphosphate binding domain VSVS12_RS03330 PF00364 Biotin-requiring enzyme VSVS12_RS03330 PF02817 e3 binding domain VSVS12_RS03330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VSVS12_RS03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS03335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VSVS12_RS03340 PF00440 Bacterial regulatory proteins, tetR family VSVS12_RS03345 PF00156 Phosphoribosyl transferase domain VSVS12_RS03350 PF00484 Carbonic anhydrase VSVS12_RS03355 PF00916 Sulfate permease family VSVS12_RS03355 PF01740 STAS domain VSVS12_RS03365 PF00916 Sulfate permease family VSVS12_RS03365 PF01740 STAS domain VSVS12_RS03370 PF00005 ABC transporter VSVS12_RS03375 PF01061 ABC-2 type transporter VSVS12_RS03380 PF02569 Pantoate-beta-alanine ligase VSVS12_RS03385 PF02548 Ketopantoate hydroxymethyltransferase VSVS12_RS03390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VSVS12_RS03395 PF01743 Poly A polymerase head domain VSVS12_RS03395 PF12626 Polymerase A arginine-rich C-terminus VSVS12_RS03395 PF12627 Probable RNA and SrmB- binding site of polymerase A VSVS12_RS03400 PF00749 tRNA synthetases class I (E and Q), catalytic domain VSVS12_RS03405 PF01258 Prokaryotic dksA/traR C4-type zinc finger VSVS12_RS03410 PF03749 Sugar fermentation stimulation protein RE domain VSVS12_RS03410 PF17746 SfsA N-terminal OB domain VSVS12_RS03415 PF00271 Helicase conserved C-terminal domain VSVS12_RS03415 PF00270 DEAD/DEAH box helicase VSVS12_RS03415 PF08482 ATP-dependent helicase C-terminal VSVS12_RS03415 PF04408 Helicase associated domain (HA2) VSVS12_RS03420 PF00905 Penicillin binding protein transpeptidase domain VSVS12_RS03420 PF14814 Bifunctional transglycosylase second domain VSVS12_RS03420 PF00912 Transglycosylase VSVS12_RS03425 PF01734 Patatin-like phospholipase VSVS12_RS03430 PF06434 Aconitate hydratase 2 N-terminus VSVS12_RS03430 PF00330 Aconitase family (aconitate hydratase) VSVS12_RS03430 PF11791 Aconitate B N-terminal domain VSVS12_RS03435 PF02595 Glycerate kinase family VSVS12_RS03440 PF02447 GntP family permease VSVS12_RS03445 PF13556 PucR C-terminal helix-turn-helix domain VSVS12_RS03445 PF17853 GGDEF-like domain VSVS12_RS03445 PF05651 Putative sugar diacid recognition VSVS12_RS03450 PF06062 Uncharacterised protein family (UPF0231) VSVS12_RS03455 PF00543 Nitrogen regulatory protein P-II VSVS12_RS03460 PF00909 Ammonium Transporter Family VSVS12_RS03465 PF13416 Bacterial extracellular solute-binding protein VSVS12_RS03470 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS03475 PF00005 ABC transporter VSVS12_RS03475 PF08402 TOBE domain VSVS12_RS03485 PF01965 DJ-1/PfpI family VSVS12_RS03490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VSVS12_RS03490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VSVS12_RS03490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VSVS12_RS03490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VSVS12_RS03495 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VSVS12_RS03495 PF06165 Glycosyltransferase family 36 VSVS12_RS03500 PF02838 Glycosyl hydrolase family 20, domain 2 VSVS12_RS03500 PF00728 Glycosyl hydrolase family 20, catalytic domain VSVS12_RS03505 PF01869 BadF/BadG/BcrA/BcrD ATPase family VSVS12_RS03515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VSVS12_RS03515 PF00005 ABC transporter VSVS12_RS03520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VSVS12_RS03520 PF00005 ABC transporter VSVS12_RS03525 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS03525 PF12911 N-terminal TM domain of oligopeptide transport permease C VSVS12_RS03530 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS03535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VSVS12_RS03540 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS03540 PF00072 Response regulator receiver domain VSVS12_RS03540 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS03545 PF08468 Methyltransferase small domain N-terminal VSVS12_RS03545 PF05175 Methyltransferase small domain VSVS12_RS03550 PF01594 AI-2E family transporter VSVS12_RS03560 PF00202 Aminotransferase class-III VSVS12_RS03565 PF01521 Iron-sulphur cluster biosynthesis VSVS12_RS03570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VSVS12_RS03570 PF00529 HlyD membrane-fusion protein of T1SS VSVS12_RS03575 PF00873 AcrB/AcrD/AcrF family VSVS12_RS03580 PF01476 LysM domain VSVS12_RS03580 PF08525 Opacity-associated protein A N-terminal motif VSVS12_RS03580 PF01551 Peptidase family M23 VSVS12_RS03585 PF00579 tRNA synthetases class I (W and Y) VSVS12_RS03595 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VSVS12_RS03600 PF13609 Gram-negative porin VSVS12_RS03605 PF03449 Transcription elongation factor, N-terminal VSVS12_RS03605 PF01272 Transcription elongation factor, GreA/GreB, C-term VSVS12_RS03610 PF01985 CRS1 / YhbY (CRM) domain VSVS12_RS03615 PF01728 FtsJ-like methyltransferase VSVS12_RS03620 PF01434 Peptidase family M41 VSVS12_RS03620 PF06480 FtsH Extracellular VSVS12_RS03620 PF00004 ATPase family associated with various cellular activities (AAA) VSVS12_RS03620 PF17862 AAA+ lid domain VSVS12_RS03625 PF00809 Pterin binding enzyme VSVS12_RS03630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VSVS12_RS03630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VSVS12_RS03630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VSVS12_RS03630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VSVS12_RS03635 PF03840 Preprotein translocase SecG subunit VSVS12_RS03650 PF02576 RimP N-terminal domain VSVS12_RS03650 PF17384 RimP C-terminal SH3 domain VSVS12_RS03655 PF13184 NusA-like KH domain VSVS12_RS03655 PF08529 NusA N-terminal domain VSVS12_RS03655 PF00575 S1 RNA binding domain VSVS12_RS03660 PF04760 Translation initiation factor IF-2, N-terminal region VSVS12_RS03660 PF08364 Bacterial translation initiation factor IF-2 associated region VSVS12_RS03660 PF11987 Translation-initiation factor 2 VSVS12_RS03660 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS03665 PF02033 Ribosome-binding factor A VSVS12_RS03670 PF01509 TruB family pseudouridylate synthase (N terminal domain) VSVS12_RS03670 PF16198 tRNA pseudouridylate synthase B C-terminal domain VSVS12_RS03670 PF09157 Pseudouridine synthase II TruB, C-terminal VSVS12_RS03680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VSVS12_RS03680 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS03685 PF01645 Conserved region in glutamate synthase VSVS12_RS03685 PF04898 Glutamate synthase central domain VSVS12_RS03685 PF00310 Glutamine amidotransferases class-II VSVS12_RS03685 PF01493 GXGXG motif VSVS12_RS03690 PF04055 Radical SAM superfamily VSVS12_RS03690 PF16199 Radical_SAM C-terminal domain VSVS12_RS03695 PF00360 Phytochrome region VSVS12_RS03695 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS03695 PF01590 GAF domain VSVS12_RS03695 PF00563 EAL domain VSVS12_RS03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS03700 PF18415 Histidine kinase receptor ArcB trans-membrane domain VSVS12_RS03700 PF00072 Response regulator receiver domain VSVS12_RS03700 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS03700 PF00989 PAS fold VSVS12_RS03700 PF01627 Hpt domain VSVS12_RS03715 PF00248 Aldo/keto reductase family VSVS12_RS03725 PF02976 DNA mismatch repair enzyme MutH VSVS12_RS03730 PF00293 NUDIX domain VSVS12_RS03735 PF01590 GAF domain VSVS12_RS03735 PF05524 PEP-utilising enzyme, N-terminal VSVS12_RS03735 PF00391 PEP-utilising enzyme, mobile domain VSVS12_RS03735 PF02896 PEP-utilising enzyme, TIM barrel domain VSVS12_RS03745 PF01790 Prolipoprotein diacylglyceryl transferase VSVS12_RS03750 PF00303 Thymidylate synthase VSVS12_RS03760 PF02690 Na+/Pi-cotransporter VSVS12_RS03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS03765 PF03466 LysR substrate binding domain VSVS12_RS03770 PF01022 Bacterial regulatory protein, arsR family VSVS12_RS03775 PF01649 Ribosomal protein S20 VSVS12_RS03780 PF03023 Lipid II flippase MurJ VSVS12_RS03785 PF06574 FAD synthetase VSVS12_RS03785 PF01687 Riboflavin kinase VSVS12_RS03790 PF08264 Anticodon-binding domain of tRNA VSVS12_RS03790 PF06827 Zinc finger found in FPG and IleRS VSVS12_RS03790 PF00133 tRNA synthetases class I (I, L, M and V) VSVS12_RS03795 PF01252 Signal peptidase (SPase) II VSVS12_RS03800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VSVS12_RS03805 PF02401 LytB protein VSVS12_RS03810 PF02554 Carbon starvation protein CstA VSVS12_RS03820 PF03702 Anhydro-N-acetylmuramic acid kinase VSVS12_RS03825 PF00933 Glycosyl hydrolase family 3 N terminal domain VSVS12_RS03830 PF00072 Response regulator receiver domain VSVS12_RS03830 PF04397 LytTr DNA-binding domain VSVS12_RS03835 PF06580 Histidine kinase VSVS12_RS03835 PF07694 5TMR of 5TMR-LYT VSVS12_RS03840 PF00793 DAHP synthetase I family VSVS12_RS03845 PF01817 Chorismate mutase type II VSVS12_RS03845 PF02153 Prephenate dehydrogenase VSVS12_RS03850 PF01551 Peptidase family M23 VSVS12_RS03850 PF04225 Opacity-associated protein A LysM-like domain VSVS12_RS03855 PF07238 PilZ domain VSVS12_RS03860 PF12848 ABC transporter VSVS12_RS03860 PF00005 ABC transporter VSVS12_RS03865 PF01464 Transglycosylase SLT domain VSVS12_RS03865 PF14718 Soluble lytic murein transglycosylase L domain VSVS12_RS03870 PF01371 Trp repressor protein VSVS12_RS03875 PF01931 Protein of unknown function DUF84 VSVS12_RS03880 PF00563 EAL domain VSVS12_RS03880 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS03885 PF13416 Bacterial extracellular solute-binding protein VSVS12_RS03890 PF01817 Chorismate mutase type II VSVS12_RS03890 PF00800 Prephenate dehydratase VSVS12_RS03895 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VSVS12_RS03900 PF01464 Transglycosylase SLT domain VSVS12_RS03915 PF13525 Outer membrane lipoprotein VSVS12_RS03920 PF01479 S4 domain VSVS12_RS03920 PF00849 RNA pseudouridylate synthase VSVS12_RS03925 PF02578 Multi-copper polyphenol oxidoreductase laccase VSVS12_RS03930 PF00004 ATPase family associated with various cellular activities (AAA) VSVS12_RS03930 PF17871 AAA lid domain VSVS12_RS03930 PF07724 AAA domain (Cdc48 subfamily) VSVS12_RS03930 PF02861 Clp amino terminal domain, pathogenicity island component VSVS12_RS03930 PF10431 C-terminal, D2-small domain, of ClpB protein VSVS12_RS03970 PF13358 DDE superfamily endonuclease VSVS12_RS03995 PF00459 Inositol monophosphatase family VSVS12_RS04000 PF00588 SpoU rRNA Methylase family VSVS12_RS04005 PF02082 Transcriptional regulator VSVS12_RS04010 PF00266 Aminotransferase class-V VSVS12_RS04015 PF01592 NifU-like N terminal domain VSVS12_RS04020 PF01521 Iron-sulphur cluster biosynthesis VSVS12_RS04025 PF07743 HSCB C-terminal oligomerisation domain VSVS12_RS04025 PF00226 DnaJ domain VSVS12_RS04030 PF00012 Hsp70 protein VSVS12_RS04035 PF00111 2Fe-2S iron-sulfur cluster binding domain VSVS12_RS04040 PF04384 Iron-sulphur cluster assembly VSVS12_RS04045 PF12404 Peptidase VSVS12_RS04045 PF00883 Cytosol aminopeptidase family, catalytic domain VSVS12_RS04050 PF00334 Nucleoside diphosphate kinase VSVS12_RS04055 PF00266 Aminotransferase class-V VSVS12_RS04060 PF01965 DJ-1/PfpI family VSVS12_RS04065 PF02558 Ketopantoate reductase PanE/ApbA VSVS12_RS04065 PF08546 Ketopantoate reductase PanE/ApbA C terminal VSVS12_RS04070 PF03502 Nucleoside-specific channel-forming protein, Tsx VSVS12_RS04080 PF04542 Sigma-70 region 2 VSVS12_RS04080 PF04545 Sigma-70, region 4 VSVS12_RS04090 PF07690 Major Facilitator Superfamily VSVS12_RS04095 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VSVS12_RS04105 PF05175 Methyltransferase small domain VSVS12_RS04110 PF01722 BolA-like protein VSVS12_RS04115 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VSVS12_RS04115 PF11973 NQRA C-terminal domain VSVS12_RS04120 PF03116 NQR2, RnfD, RnfE family VSVS12_RS04125 PF04205 FMN-binding domain VSVS12_RS04130 PF02508 Rnf-Nqr subunit, membrane protein VSVS12_RS04135 PF02508 Rnf-Nqr subunit, membrane protein VSVS12_RS04140 PF00970 Oxidoreductase FAD-binding domain VSVS12_RS04140 PF00175 Oxidoreductase NAD-binding domain VSVS12_RS04140 PF00111 2Fe-2S iron-sulfur cluster binding domain VSVS12_RS04145 PF02424 ApbE family VSVS12_RS04155 PF00072 Response regulator receiver domain VSVS12_RS04155 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS04160 PF11799 impB/mucB/samB family C-terminal domain VSVS12_RS04160 PF11798 IMS family HHH motif VSVS12_RS04160 PF00817 impB/mucB/samB family VSVS12_RS04165 PF03449 Transcription elongation factor, N-terminal VSVS12_RS04165 PF01272 Transcription elongation factor, GreA/GreB, C-term VSVS12_RS04175 PF00209 Sodium:neurotransmitter symporter family VSVS12_RS04180 PF01609 Transposase DDE domain VSVS12_RS04180 PF13006 Insertion element 4 transposase N-terminal VSVS12_RS04190 PF08443 RimK-like ATP-grasp domain VSVS12_RS04190 PF18030 RimK PreATP-grasp domain VSVS12_RS04195 PF08443 RimK-like ATP-grasp domain VSVS12_RS04195 PF18030 RimK PreATP-grasp domain VSVS12_RS04200 PF01546 Peptidase family M20/M25/M40 VSVS12_RS04200 PF07687 Peptidase dimerisation domain VSVS12_RS04205 PF00860 Permease family VSVS12_RS04210 PF00156 Phosphoribosyl transferase domain VSVS12_RS04215 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VSVS12_RS04220 PF07417 Sigma factor-binding transcriptional regulator Crl VSVS12_RS04225 PF00696 Amino acid kinase family VSVS12_RS04225 PF01472 PUA domain VSVS12_RS04230 PF00171 Aldehyde dehydrogenase family VSVS12_RS04235 PF03477 ATP cone domain VSVS12_RS04240 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VSVS12_RS04240 PF01872 RibD C-terminal domain VSVS12_RS04245 PF00677 Lumazine binding domain VSVS12_RS04250 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VSVS12_RS04250 PF00925 GTP cyclohydrolase II VSVS12_RS04255 PF00885 6,7-dimethyl-8-ribityllumazine synthase VSVS12_RS04260 PF01029 NusB family VSVS12_RS04265 PF00586 AIR synthase related protein, N-terminal domain VSVS12_RS04265 PF02769 AIR synthase related protein, C-terminal domain VSVS12_RS04270 PF04608 Phosphatidylglycerophosphatase A VSVS12_RS04275 PF01527 Transposase VSVS12_RS04280 PF00665 Integrase core domain VSVS12_RS04280 PF13276 HTH-like domain VSVS12_RS04280 PF13333 Integrase core domain VSVS12_RS04285 PF11944 Protein of unknown function (DUF3461) VSVS12_RS04290 PF01842 ACT domain VSVS12_RS04290 PF01966 HD domain VSVS12_RS04290 PF01909 Nucleotidyltransferase domain VSVS12_RS04290 PF08335 GlnD PII-uridylyltransferase VSVS12_RS04295 PF00557 Metallopeptidase family M24 VSVS12_RS04300 PF00318 Ribosomal protein S2 VSVS12_RS04305 PF00889 Elongation factor TS VSVS12_RS04310 PF00696 Amino acid kinase family VSVS12_RS04315 PF01765 Ribosome recycling factor VSVS12_RS04320 PF01255 Putative undecaprenyl diphosphate synthase VSVS12_RS04330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VSVS12_RS04330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VSVS12_RS04330 PF13288 DXP reductoisomerase C-terminal domain VSVS12_RS04335 PF17820 PDZ domain VSVS12_RS04335 PF02163 Peptidase family M50 VSVS12_RS04340 PF07244 Surface antigen variable number repeat VSVS12_RS04340 PF01103 Surface antigen VSVS12_RS04345 PF03938 Outer membrane protein (OmpH-like) VSVS12_RS04350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VSVS12_RS04350 PF00132 Bacterial transferase hexapeptide (six repeats) VSVS12_RS04355 PF07977 FabA-like domain VSVS12_RS04360 PF00132 Bacterial transferase hexapeptide (six repeats) VSVS12_RS04360 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VSVS12_RS04365 PF02684 Lipid-A-disaccharide synthetase VSVS12_RS04370 PF01351 Ribonuclease HII VSVS12_RS04375 PF07733 Bacterial DNA polymerase III alpha NTPase domain VSVS12_RS04375 PF01336 OB-fold nucleic acid binding domain VSVS12_RS04375 PF02811 PHP domain VSVS12_RS04375 PF14579 Helix-hairpin-helix motif VSVS12_RS04375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VSVS12_RS04380 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VSVS12_RS04385 PF11734 TilS substrate C-terminal domain VSVS12_RS04385 PF09179 TilS substrate binding domain VSVS12_RS04385 PF01171 PP-loop family VSVS12_RS04390 PF00543 Nitrogen regulatory protein P-II VSVS12_RS04395 PF03372 Endonuclease/Exonuclease/phosphatase family VSVS12_RS04405 PF01476 LysM domain VSVS12_RS04405 PF01464 Transglycosylase SLT domain VSVS12_RS04410 PF00753 Metallo-beta-lactamase superfamily VSVS12_RS04410 PF16123 Hydroxyacylglutathione hydrolase C-terminus VSVS12_RS04415 PF08241 Methyltransferase domain VSVS12_RS04420 PF00075 RNase H VSVS12_RS04425 PF00929 Exonuclease VSVS12_RS04435 PF13006 Insertion element 4 transposase N-terminal VSVS12_RS04435 PF01609 Transposase DDE domain VSVS12_RS04440 PF09317 Domain of unknown function (DUF1974) VSVS12_RS04440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VSVS12_RS04440 PF02770 Acyl-CoA dehydrogenase, middle domain VSVS12_RS04440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VSVS12_RS04445 PF13580 SIS domain VSVS12_RS04450 PF13230 Glutamine amidotransferases class-II VSVS12_RS04455 PF04073 Aminoacyl-tRNA editing domain VSVS12_RS04455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VSVS12_RS04455 PF03129 Anticodon binding domain VSVS12_RS04460 PF01980 tRNA-methyltransferase O VSVS12_RS04460 PF18389 TrmO C-terminal domain VSVS12_RS04465 PF01197 Ribosomal protein L31 VSVS12_RS04470 PF00444 Ribosomal protein L36 VSVS12_RS04475 PF03180 NLPA lipoprotein VSVS12_RS04480 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS04485 PF00005 ABC transporter VSVS12_RS04485 PF09383 NIL domain VSVS12_RS04505 PF00464 Serine hydroxymethyltransferase VSVS12_RS04515 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VSVS12_RS04515 PF04055 Radical SAM superfamily VSVS12_RS04520 PF03099 Biotin/lipoate A/B protein ligase family VSVS12_RS04525 PF04359 Protein of unknown function (DUF493) VSVS12_RS04530 PF00768 D-alanyl-D-alanine carboxypeptidase VSVS12_RS04530 PF07943 Penicillin-binding protein 5, C-terminal domain VSVS12_RS04535 PF05036 Sporulation related domain VSVS12_RS04535 PF03330 Lytic transglycolase VSVS12_RS04540 PF01098 Cell cycle protein VSVS12_RS04545 PF00905 Penicillin binding protein transpeptidase domain VSVS12_RS04545 PF03717 Penicillin-binding Protein dimerisation domain VSVS12_RS04550 PF02590 Predicted SPOUT methyltransferase VSVS12_RS04560 PF06144 DNA polymerase III, delta subunit VSVS12_RS04560 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VSVS12_RS04565 PF04390 Lipopolysaccharide-assembly VSVS12_RS04570 PF13603 Leucyl-tRNA synthetase, Domain 2 VSVS12_RS04570 PF00133 tRNA synthetases class I (I, L, M and V) VSVS12_RS04570 PF08264 Anticodon-binding domain of tRNA VSVS12_RS04575 PF07295 Zinc-ribbon containing domain VSVS12_RS04580 PF00795 Carbon-nitrogen hydrolase VSVS12_RS04585 PF03471 Transporter associated domain VSVS12_RS04585 PF00571 CBS domain VSVS12_RS04590 PF02130 Uncharacterized protein family UPF0054 VSVS12_RS04595 PF02562 PhoH-like protein VSVS12_RS04600 PF04055 Radical SAM superfamily VSVS12_RS04600 PF00919 Uncharacterized protein family UPF0004 VSVS12_RS04600 PF01938 TRAM domain VSVS12_RS04605 PF01494 FAD binding domain VSVS12_RS04610 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VSVS12_RS04615 PF02896 PEP-utilising enzyme, TIM barrel domain VSVS12_RS04615 PF00391 PEP-utilising enzyme, mobile domain VSVS12_RS04615 PF05524 PEP-utilising enzyme, N-terminal VSVS12_RS04620 PF00381 PTS HPr component phosphorylation site VSVS12_RS04625 PF00291 Pyridoxal-phosphate dependent enzyme VSVS12_RS04635 PF04354 ZipA, C-terminal FtsZ-binding domain VSVS12_RS04640 PF01653 NAD-dependent DNA ligase adenylation domain VSVS12_RS04640 PF00533 BRCA1 C Terminus (BRCT) domain VSVS12_RS04640 PF03120 NAD-dependent DNA ligase OB-fold domain VSVS12_RS04640 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VSVS12_RS04640 PF12826 Helix-hairpin-helix motif VSVS12_RS04645 PF13609 Gram-negative porin VSVS12_RS04660 PF01957 NfeD-like C-terminal, partner-binding VSVS12_RS04665 PF16200 C-terminal region of band_7 VSVS12_RS04665 PF01145 SPFH domain / Band 7 family VSVS12_RS04670 PF00085 Thioredoxin VSVS12_RS04675 PF00106 short chain dehydrogenase VSVS12_RS04680 PF08338 Domain of unknown function (DUF1731) VSVS12_RS04680 PF01370 NAD dependent epimerase/dehydratase family VSVS12_RS04685 PF07556 Protein of unknown function (DUF1538) VSVS12_RS04690 PF07556 Protein of unknown function (DUF1538) VSVS12_RS04705 PF12850 Calcineurin-like phosphoesterase superfamily domain VSVS12_RS04720 PF17323 Trans-membrane regulatory protein ToxS VSVS12_RS04725 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS04730 PF00183 Hsp90 protein VSVS12_RS04730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS04735 PF05191 Adenylate kinase, active site lid VSVS12_RS04740 PF00762 Ferrochelatase VSVS12_RS04755 PF00403 Heavy-metal-associated domain VSVS12_RS04760 PF13609 Gram-negative porin VSVS12_RS04770 PF00749 tRNA synthetases class I (E and Q), catalytic domain VSVS12_RS04775 PF00691 OmpA family VSVS12_RS04775 PF01389 OmpA-like transmembrane domain VSVS12_RS04810 PF04316 Anti-sigma-28 factor, FlgM VSVS12_RS04820 PF01584 CheW-like domain VSVS12_RS04820 PF00072 Response regulator receiver domain VSVS12_RS04825 PF03705 CheR methyltransferase, all-alpha domain VSVS12_RS04825 PF01739 CheR methyltransferase, SAM binding domain VSVS12_RS04830 PF00460 Flagella basal body rod protein VSVS12_RS04835 PF00460 Flagella basal body rod protein VSVS12_RS04835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VSVS12_RS04840 PF13860 FlgD Ig-like domain VSVS12_RS04840 PF03963 Flagellar hook capping protein - N-terminal region VSVS12_RS04840 PF13861 FlgD Tudor-like domain VSVS12_RS04845 PF07559 Flagellar basal body protein FlaE VSVS12_RS04845 PF00460 Flagella basal body rod protein VSVS12_RS04845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VSVS12_RS04850 PF00460 Flagella basal body rod protein VSVS12_RS04850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VSVS12_RS04855 PF00460 Flagella basal body rod protein VSVS12_RS04855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VSVS12_RS04860 PF02107 Flagellar L-ring protein VSVS12_RS04865 PF02119 Flagellar P-ring protein VSVS12_RS04870 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VSVS12_RS04870 PF10135 Rod binding protein VSVS12_RS04880 PF07196 Flagellin hook IN motif VSVS12_RS04880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VSVS12_RS04885 PF00669 Bacterial flagellin N-terminal helical region VSVS12_RS04890 PF00669 Bacterial flagellin N-terminal helical region VSVS12_RS04890 PF07196 Flagellin hook IN motif VSVS12_RS04890 PF00700 Bacterial flagellin C-terminal helical region VSVS12_RS04895 PF00700 Bacterial flagellin C-terminal helical region VSVS12_RS04895 PF07196 Flagellin hook IN motif VSVS12_RS04895 PF00669 Bacterial flagellin N-terminal helical region VSVS12_RS04980 PF01926 50S ribosome-binding GTPase VSVS12_RS04980 PF06071 Protein of unknown function (DUF933) VSVS12_RS04985 PF01195 Peptidyl-tRNA hydrolase VSVS12_RS04990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VSVS12_RS04990 PF14572 Phosphoribosyl synthetase-associated domain VSVS12_RS04995 PF08544 GHMP kinases C terminal VSVS12_RS04995 PF00288 GHMP kinases N terminal domain VSVS12_RS05000 PF03550 Outer membrane lipoprotein LolB VSVS12_RS05005 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VSVS12_RS05005 PF01488 Shikimate / quinate 5-dehydrogenase VSVS12_RS05005 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VSVS12_RS05010 PF03462 PCRF domain VSVS12_RS05010 PF00472 RF-1 domain VSVS12_RS05015 PF17827 PrmC N-terminal domain VSVS12_RS05015 PF13847 Methyltransferase domain VSVS12_RS05020 PF04247 Invasion gene expression up-regulator, SirB VSVS12_RS05025 PF13369 Transglutaminase-like superfamily VSVS12_RS05030 PF00793 DAHP synthetase I family VSVS12_RS05035 PF00149 Calcineurin-like phosphoesterase VSVS12_RS05035 PF02872 5'-nucleotidase, C-terminal domain VSVS12_RS05040 PF04073 Aminoacyl-tRNA editing domain VSVS12_RS05045 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VSVS12_RS05045 PF13542 Helix-turn-helix domain of transposase family ISL3 VSVS12_RS05045 PF01610 Transposase VSVS12_RS05050 PF00860 Permease family VSVS12_RS05065 PF03358 NADPH-dependent FMN reductase VSVS12_RS05070 PF03960 ArsC family VSVS12_RS05075 PF01435 Peptidase family M48 VSVS12_RS05075 PF13181 Tetratricopeptide repeat VSVS12_RS05085 PF01594 AI-2E family transporter VSVS12_RS05090 PF00672 HAMP domain VSVS12_RS05090 PF02743 Cache domain VSVS12_RS05090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS05100 PF18766 SWI2/SNF2 ATPase VSVS12_RS05100 PF11867 Domain of unknown function (DUF3387) VSVS12_RS05100 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VSVS12_RS05110 PF01420 Type I restriction modification DNA specificity domain VSVS12_RS05115 PF12161 HsdM N-terminal domain VSVS12_RS05115 PF02384 N-6 DNA Methylase VSVS12_RS05130 PF02899 Phage integrase, N-terminal SAM-like domain VSVS12_RS05130 PF00589 Phage integrase family VSVS12_RS05145 PF00578 AhpC/TSA family VSVS12_RS05170 PF00578 AhpC/TSA family VSVS12_RS05180 PF00701 Dihydrodipicolinate synthetase family VSVS12_RS05185 PF06804 NlpB/DapX lipoprotein VSVS12_RS05190 PF13726 Na+-H+ antiporter family VSVS12_RS05190 PF03553 Na+/H+ antiporter family VSVS12_RS05195 PF00929 Exonuclease VSVS12_RS05200 PF18393 MotY N-terminal domain VSVS12_RS05200 PF00691 OmpA family VSVS12_RS05205 PF10952 Protein of unknown function (DUF2753) VSVS12_RS05210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VSVS12_RS05215 PF10576 Iron-sulfur binding domain of endonuclease III VSVS12_RS05215 PF00633 Helix-hairpin-helix motif VSVS12_RS05215 PF00730 HhH-GPD superfamily base excision DNA repair protein VSVS12_RS05220 PF02508 Rnf-Nqr subunit, membrane protein VSVS12_RS05225 PF04205 FMN-binding domain VSVS12_RS05230 PF03116 NQR2, RnfD, RnfE family VSVS12_RS05235 PF12838 4Fe-4S dicluster domain VSVS12_RS05235 PF13375 RnfC Barrel sandwich hybrid domain VSVS12_RS05235 PF10531 SLBB domain VSVS12_RS05235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VSVS12_RS05240 PF04060 Putative Fe-S cluster VSVS12_RS05245 PF02508 Rnf-Nqr subunit, membrane protein VSVS12_RS05250 PF03605 Anaerobic c4-dicarboxylate membrane transporter VSVS12_RS05260 PF04851 Type III restriction enzyme, res subunit VSVS12_RS05260 PF00271 Helicase conserved C-terminal domain VSVS12_RS05260 PF12344 Ultra-violet resistance protein B VSVS12_RS05260 PF17757 UvrB interaction domain VSVS12_RS05260 PF02151 UvrB/uvrC motif VSVS12_RS05265 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS05265 PF00158 Sigma-54 interaction domain VSVS12_RS05265 PF00072 Response regulator receiver domain VSVS12_RS05270 PF01627 Hpt domain VSVS12_RS05275 PF01933 Uncharacterised protein family UPF0052 VSVS12_RS05280 PF06463 Molybdenum Cofactor Synthesis C VSVS12_RS05280 PF04055 Radical SAM superfamily VSVS12_RS05285 PF00994 Probable molybdopterin binding domain VSVS12_RS05290 PF01967 MoaC family VSVS12_RS05295 PF02597 ThiS family VSVS12_RS05300 PF02391 MoaE protein VSVS12_RS05305 PF01368 DHH family VSVS12_RS05305 PF02272 DHHA1 domain VSVS12_RS05305 PF00571 CBS domain VSVS12_RS05305 PF01743 Poly A polymerase head domain VSVS12_RS05310 PF01554 MatE VSVS12_RS05315 PF00403 Heavy-metal-associated domain VSVS12_RS05320 PF01048 Phosphorylase superfamily VSVS12_RS05325 PF01588 Putative tRNA binding domain VSVS12_RS05325 PF09334 tRNA synthetases class I (M) VSVS12_RS05330 PF10609 NUBPL iron-transfer P-loop NTPase VSVS12_RS05335 PF00485 Phosphoribulokinase / Uridine kinase family VSVS12_RS05340 PF05170 AsmA family VSVS12_RS05345 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VSVS12_RS05350 PF01451 Low molecular weight phosphotyrosine protein phosphatase VSVS12_RS05365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VSVS12_RS05365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VSVS12_RS05370 PF00462 Glutaredoxin VSVS12_RS05375 PF01751 Toprim domain VSVS12_RS05375 PF01131 DNA topoisomerase VSVS12_RS05385 PF00850 Histone deacetylase domain VSVS12_RS05390 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS05390 PF17152 Periplasmic sensor domain VSVS12_RS05400 PF01053 Cys/Met metabolism PLP-dependent enzyme VSVS12_RS05410 PF07702 UTRA domain VSVS12_RS05410 PF00392 Bacterial regulatory proteins, gntR family VSVS12_RS05415 PF02780 Transketolase, C-terminal domain VSVS12_RS05415 PF02779 Transketolase, pyrimidine binding domain VSVS12_RS05420 PF02780 Transketolase, C-terminal domain VSVS12_RS05420 PF02779 Transketolase, pyrimidine binding domain VSVS12_RS05420 PF00456 Transketolase, thiamine diphosphate binding domain VSVS12_RS05425 PF03611 PTS system sugar-specific permease component VSVS12_RS05435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VSVS12_RS05440 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) VSVS12_RS05445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VSVS12_RS05445 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS05450 PF00375 Sodium:dicarboxylate symporter family VSVS12_RS05455 PF01042 Endoribonuclease L-PSP VSVS12_RS05460 PF13309 HTH domain VSVS12_RS05460 PF08348 YheO-like PAS domain VSVS12_RS05465 PF03606 C4-dicarboxylate anaerobic carrier VSVS12_RS05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS05475 PF03466 LysR substrate binding domain VSVS12_RS05490 PF11893 Domain of unknown function (DUF3413) VSVS12_RS05490 PF00884 Sulfatase VSVS12_RS05495 PF07208 Protein of unknown function (DUF1414) VSVS12_RS05500 PF04245 37-kD nucleoid-associated bacterial protein VSVS12_RS05515 PF03553 Na+/H+ antiporter family VSVS12_RS05520 PF02774 Semialdehyde dehydrogenase, dimerisation domain VSVS12_RS05520 PF01118 Semialdehyde dehydrogenase, NAD binding domain VSVS12_RS05535 PF00027 Cyclic nucleotide-binding domain VSVS12_RS05535 PF00520 Ion transport protein VSVS12_RS05540 PF01914 MarC family integral membrane protein VSVS12_RS05545 PF00171 Aldehyde dehydrogenase family VSVS12_RS05545 PF00465 Iron-containing alcohol dehydrogenase VSVS12_RS05550 PF03776 Septum formation topological specificity factor MinE VSVS12_RS05555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VSVS12_RS05560 PF03775 Septum formation inhibitor MinC, C-terminal domain VSVS12_RS05560 PF05209 Septum formation inhibitor MinC, N-terminal domain VSVS12_RS05565 PF05166 YcgL domain VSVS12_RS05570 PF13406 Transglycosylase SLT domain VSVS12_RS05575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS05575 PF03466 LysR substrate binding domain VSVS12_RS05580 PF01773 Na+ dependent nucleoside transporter N-terminus VSVS12_RS05580 PF07662 Na+ dependent nucleoside transporter C-terminus VSVS12_RS05580 PF07670 Nucleoside recognition VSVS12_RS05585 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VSVS12_RS05585 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VSVS12_RS05640 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VSVS12_RS05645 PF03441 FAD binding domain of DNA photolyase VSVS12_RS05645 PF00875 DNA photolyase VSVS12_RS05655 PF00155 Aminotransferase class I and II VSVS12_RS05660 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VSVS12_RS05675 PF02378 Phosphotransferase system, EIIC VSVS12_RS05680 PF01321 Creatinase/Prolidase N-terminal domain VSVS12_RS05680 PF00557 Metallopeptidase family M24 VSVS12_RS05685 PF05343 M42 glutamyl aminopeptidase VSVS12_RS05710 PF03830 PTS system sorbose subfamily IIB component VSVS12_RS05715 PF03609 PTS system sorbose-specific iic component VSVS12_RS05720 PF03613 PTS system mannose/fructose/sorbose family IID component VSVS12_RS05730 PF07470 Glycosyl Hydrolase Family 88 VSVS12_RS05745 PF01614 Bacterial transcriptional regulator VSVS12_RS05745 PF09339 IclR helix-turn-helix domain VSVS12_RS05755 PF10688 Bacterial inner membrane protein VSVS12_RS05760 PF00294 pfkB family carbohydrate kinase VSVS12_RS05770 PF00012 Hsp70 protein VSVS12_RS05775 PF02798 Glutathione S-transferase, N-terminal domain VSVS12_RS05790 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VSVS12_RS05795 PF03480 Bacterial extracellular solute-binding protein, family 7 VSVS12_RS05800 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VSVS12_RS05805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VSVS12_RS05815 PF00005 ABC transporter VSVS12_RS05820 PF01032 FecCD transport family VSVS12_RS05830 PF02472 Biopolymer transport protein ExbD/TolR VSVS12_RS05835 PF01618 MotA/TolQ/ExbB proton channel family VSVS12_RS05845 PF04055 Radical SAM superfamily VSVS12_RS05850 PF06228 Haem utilisation ChuX/HutX VSVS12_RS05855 PF01243 Pyridoxamine 5'-phosphate oxidase VSVS12_RS05865 PF00158 Sigma-54 interaction domain VSVS12_RS05865 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS05865 PF00072 Response regulator receiver domain VSVS12_RS05870 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS05870 PF02743 Cache domain VSVS12_RS05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS05875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VSVS12_RS05875 PF05698 Bacterial trigger factor protein (TF) C-terminus VSVS12_RS05875 PF05697 Bacterial trigger factor protein (TF) VSVS12_RS05880 PF00574 Clp protease VSVS12_RS05885 PF10431 C-terminal, D2-small domain, of ClpB protein VSVS12_RS05885 PF06689 ClpX C4-type zinc finger VSVS12_RS05885 PF07724 AAA domain (Cdc48 subfamily) VSVS12_RS05890 PF05362 Lon protease (S16) C-terminal proteolytic domain VSVS12_RS05890 PF02190 ATP-dependent protease La (LON) substrate-binding domain VSVS12_RS05890 PF00004 ATPase family associated with various cellular activities (AAA) VSVS12_RS05895 PF00216 Bacterial DNA-binding protein VSVS12_RS05900 PF13145 PPIC-type PPIASE domain VSVS12_RS05910 PF02224 Cytidylate kinase VSVS12_RS05915 PF00575 S1 RNA binding domain VSVS12_RS05920 PF00216 Bacterial DNA-binding protein VSVS12_RS05925 PF06305 Lipopolysaccharide assembly protein A domain VSVS12_RS05930 PF18073 Rubredoxin metal binding domain VSVS12_RS05935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VSVS12_RS05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS05945 PF03466 LysR substrate binding domain VSVS12_RS05960 PF02653 Branched-chain amino acid transport system / permease component VSVS12_RS05970 PF01207 Dihydrouridine synthase (Dus) VSVS12_RS05980 PF02810 SEC-C motif VSVS12_RS05980 PF07517 SecA DEAD-like domain VSVS12_RS05980 PF01043 SecA preprotein cross-linking domain VSVS12_RS05980 PF07516 SecA Wing and Scaffold domain VSVS12_RS05985 PF03548 Outer membrane lipoprotein carrier protein LolA VSVS12_RS05990 PF00004 ATPase family associated with various cellular activities (AAA) VSVS12_RS05990 PF16193 AAA C-terminal domain VSVS12_RS05990 PF12002 MgsA AAA+ ATPase C terminal VSVS12_RS05995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VSVS12_RS05995 PF02403 Seryl-tRNA synthetase N-terminal domain VSVS12_RS06000 PF14602 Hexapeptide repeat of succinyl-transferase VSVS12_RS06000 PF00132 Bacterial transferase hexapeptide (six repeats) VSVS12_RS06000 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal VSVS12_RS06010 PF17763 Glutaminase/Asparaginase C-terminal domain VSVS12_RS06010 PF00710 Asparaginase, N-terminal VSVS12_RS06015 PF01343 Peptidase family S49 VSVS12_RS06020 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS06020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VSVS12_RS06030 PF01842 ACT domain VSVS12_RS06030 PF00551 Formyl transferase VSVS12_RS06040 PF13307 Helicase C-terminal domain VSVS12_RS06040 PF04851 Type III restriction enzyme, res subunit VSVS12_RS06045 PF00814 Glycoprotease family VSVS12_RS06055 PF03843 Outer membrane lipoprotein Slp family VSVS12_RS06060 PF08241 Methyltransferase domain VSVS12_RS06060 PF12697 Alpha/beta hydrolase family VSVS12_RS06065 PF13193 AMP-binding enzyme C-terminal domain VSVS12_RS06065 PF00501 AMP-binding enzyme VSVS12_RS06070 PF01612 3'-5' exonuclease VSVS12_RS06070 PF00570 HRDC domain VSVS12_RS06080 PF13091 PLD-like domain VSVS12_RS06085 PF01740 STAS domain VSVS12_RS06085 PF00916 Sulfate permease family VSVS12_RS06090 PF00575 S1 RNA binding domain VSVS12_RS06090 PF10150 Ribonuclease E/G family VSVS12_RS06090 PF12111 Polyribonucleotide phosphorylase C terminal VSVS12_RS06095 PF01479 S4 domain VSVS12_RS06095 PF00849 RNA pseudouridylate synthase VSVS12_RS06100 PF02545 Maf-like protein VSVS12_RS06105 PF02620 Large ribosomal RNA subunit accumulation protein YceD VSVS12_RS06110 PF01783 Ribosomal L32p protein family VSVS12_RS06115 PF02504 Fatty acid synthesis protein VSVS12_RS06120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VSVS12_RS06120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VSVS12_RS06125 PF00698 Acyl transferase domain VSVS12_RS06135 PF00550 Phosphopantetheine attachment site VSVS12_RS06140 PF02801 Beta-ketoacyl synthase, C-terminal domain VSVS12_RS06140 PF00109 Beta-ketoacyl synthase, N-terminal domain VSVS12_RS06145 PF01063 Amino-transferase class IV VSVS12_RS06150 PF02618 YceG-like family VSVS12_RS06155 PF02223 Thymidylate kinase VSVS12_RS06160 PF09115 DNA polymerase III, delta subunit, C terminal VSVS12_RS06165 PF01026 TatD related DNase VSVS12_RS06170 PF00367 phosphotransferase system, EIIB VSVS12_RS06170 PF02378 Phosphotransferase system, EIIC VSVS12_RS06185 PF00209 Sodium:neurotransmitter symporter family VSVS12_RS06200 PF01734 Patatin-like phospholipase VSVS12_RS06205 PF00480 ROK family VSVS12_RS06210 PF00072 Response regulator receiver domain VSVS12_RS06210 PF01584 CheW-like domain VSVS12_RS06215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VSVS12_RS06215 PF14579 Helix-hairpin-helix motif VSVS12_RS06215 PF02811 PHP domain VSVS12_RS06215 PF01336 OB-fold nucleic acid binding domain VSVS12_RS06215 PF07733 Bacterial DNA polymerase III alpha NTPase domain VSVS12_RS06230 PF00106 short chain dehydrogenase VSVS12_RS06235 PF08496 Peptidase family S49 N-terminal VSVS12_RS06235 PF01343 Peptidase family S49 VSVS12_RS06240 PF01116 Fructose-bisphosphate aldolase class-II VSVS12_RS06245 PF01979 Amidohydrolase family VSVS12_RS06250 PF03610 PTS system fructose IIA component VSVS12_RS06255 PF03613 PTS system mannose/fructose/sorbose family IID component VSVS12_RS06260 PF03609 PTS system sorbose-specific iic component VSVS12_RS06265 PF03830 PTS system sorbose subfamily IIB component VSVS12_RS06270 PF01380 SIS domain VSVS12_RS06275 PF08013 Tagatose 6 phosphate kinase VSVS12_RS06280 PF08220 DeoR-like helix-turn-helix domain VSVS12_RS06280 PF00455 DeoR C terminal sensor domain VSVS12_RS06285 PF00313 'Cold-shock' DNA-binding domain VSVS12_RS06295 PF08220 DeoR-like helix-turn-helix domain VSVS12_RS06295 PF00455 DeoR C terminal sensor domain VSVS12_RS06310 PF01966 HD domain VSVS12_RS06310 PF13286 Phosphohydrolase-associated domain VSVS12_RS06320 PF00155 Aminotransferase class I and II VSVS12_RS06325 PF00425 chorismate binding enzyme VSVS12_RS06330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VSVS12_RS06330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VSVS12_RS06330 PF16582 Middle domain of thiamine pyrophosphate VSVS12_RS06335 PF12697 Alpha/beta hydrolase family VSVS12_RS06340 PF00378 Enoyl-CoA hydratase/isomerase VSVS12_RS06345 PF13378 Enolase C-terminal domain-like VSVS12_RS06350 PF00501 AMP-binding enzyme VSVS12_RS06350 PF13193 AMP-binding enzyme C-terminal domain VSVS12_RS06355 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VSVS12_RS06355 PF00367 phosphotransferase system, EIIB VSVS12_RS06355 PF02378 Phosphotransferase system, EIIC VSVS12_RS06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS06360 PF03466 LysR substrate binding domain VSVS12_RS06365 PF03601 Conserved hypothetical protein 698 VSVS12_RS06370 PF07690 Major Facilitator Superfamily VSVS12_RS06390 PF00291 Pyridoxal-phosphate dependent enzyme VSVS12_RS06395 PF01037 Lrp/AsnC ligand binding domain VSVS12_RS06395 PF13404 AsnC-type helix-turn-helix domain VSVS12_RS06410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VSVS12_RS06420 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS06420 PF00563 EAL domain VSVS12_RS06420 PF08448 PAS fold VSVS12_RS06435 PF13402 Peptidase M60, enhancin and enhancin-like VSVS12_RS06435 PF17291 N-terminal domain of M60-like peptidases VSVS12_RS06435 PF13322 Domain of unknown function (DUF4092) VSVS12_RS06445 PF00563 EAL domain VSVS12_RS06445 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS06445 PF03707 Bacterial signalling protein N terminal repeat VSVS12_RS06450 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS06450 PF00072 Response regulator receiver domain VSVS12_RS06450 PF09308 LuxQ, periplasmic VSVS12_RS06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS06455 PF03466 LysR substrate binding domain VSVS12_RS06460 PF00106 short chain dehydrogenase VSVS12_RS06465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VSVS12_RS06470 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS06475 PF12911 N-terminal TM domain of oligopeptide transport permease C VSVS12_RS06475 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS06480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VSVS12_RS06480 PF00005 ABC transporter VSVS12_RS06485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VSVS12_RS06485 PF00005 ABC transporter VSVS12_RS06490 PF13416 Bacterial extracellular solute-binding protein VSVS12_RS06495 PF00850 Histone deacetylase domain VSVS12_RS06500 PF13409 Glutathione S-transferase, N-terminal domain VSVS12_RS06535 PF13533 Biotin-lipoyl like VSVS12_RS06540 PF00873 AcrB/AcrD/AcrF family VSVS12_RS06545 PF12838 4Fe-4S dicluster domain VSVS12_RS06545 PF00037 4Fe-4S binding domain VSVS12_RS06550 PF02613 Nitrate reductase delta subunit VSVS12_RS06555 PF01568 Molydopterin dinucleotide binding domain VSVS12_RS06555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VSVS12_RS06555 PF00384 Molybdopterin oxidoreductase VSVS12_RS06560 PF13247 4Fe-4S dicluster domain VSVS12_RS06560 PF12800 4Fe-4S binding domain VSVS12_RS06565 PF04976 DMSO reductase anchor subunit (DmsC) VSVS12_RS06575 PF01515 Phosphate acetyl/butaryl transferase VSVS12_RS06575 PF07085 DRTGG domain VSVS12_RS06580 PF00871 Acetokinase family VSVS12_RS06585 PF04217 Protein of unknown function, DUF412 VSVS12_RS06590 PF01527 Transposase VSVS12_RS06595 PF13276 HTH-like domain VSVS12_RS06595 PF13333 Integrase core domain VSVS12_RS06595 PF00665 Integrase core domain VSVS12_RS06600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VSVS12_RS06600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VSVS12_RS06605 PF01037 Lrp/AsnC ligand binding domain VSVS12_RS06610 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VSVS12_RS06610 PF01580 FtsK/SpoIIIE family VSVS12_RS06610 PF17854 FtsK alpha domain VSVS12_RS06610 PF09397 Ftsk gamma domain VSVS12_RS06615 PF02600 Disulfide bond formation protein DsbB VSVS12_RS06620 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VSVS12_RS06625 PF00392 Bacterial regulatory proteins, gntR family VSVS12_RS06625 PF07840 FadR C-terminal domain VSVS12_RS06630 PF00175 Oxidoreductase NAD-binding domain VSVS12_RS06630 PF00111 2Fe-2S iron-sulfur cluster binding domain VSVS12_RS06630 PF00970 Oxidoreductase FAD-binding domain VSVS12_RS06635 PF03063 Prismane/CO dehydrogenase family VSVS12_RS06640 PF01590 GAF domain VSVS12_RS06640 PF00158 Sigma-54 interaction domain VSVS12_RS06650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS06650 PF00672 HAMP domain VSVS12_RS06655 PF01230 HIT domain VSVS12_RS06670 PF13036 Peptidoglycan-synthase activator LpoB VSVS12_RS06670 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VSVS12_RS06680 PF05728 Uncharacterised protein family (UPF0227) VSVS12_RS06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS06700 PF02559 CarD-like/TRCF domain VSVS12_RS06700 PF00270 DEAD/DEAH box helicase VSVS12_RS06700 PF00271 Helicase conserved C-terminal domain VSVS12_RS06700 PF03461 TRCF domain VSVS12_RS06700 PF17757 UvrB interaction domain VSVS12_RS06710 PF12704 MacB-like periplasmic core domain VSVS12_RS06710 PF02687 FtsX-like permease family VSVS12_RS06715 PF00005 ABC transporter VSVS12_RS06720 PF02687 FtsX-like permease family VSVS12_RS06720 PF12704 MacB-like periplasmic core domain VSVS12_RS06730 PF03772 Competence protein VSVS12_RS06730 PF13567 Domain of unknown function (DUF4131) VSVS12_RS06730 PF00753 Metallo-beta-lactamase superfamily VSVS12_RS06735 PF00005 ABC transporter VSVS12_RS06735 PF00664 ABC transporter transmembrane region VSVS12_RS06740 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VSVS12_RS06745 PF03966 Trm112p-like protein VSVS12_RS06750 PF02348 Cytidylyltransferase VSVS12_RS06755 PF04293 SpoVR like protein VSVS12_RS06760 PF04285 Protein of unknown function (DUF444) VSVS12_RS06765 PF08298 PrkA AAA domain VSVS12_RS06765 PF06798 PrkA serine protein kinase C-terminal domain VSVS12_RS06770 PF06629 MltA-interacting protein MipA VSVS12_RS06775 PF03887 YfbU domain VSVS12_RS06780 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family VSVS12_RS06785 PF04055 Radical SAM superfamily VSVS12_RS06795 PF02901 Pyruvate formate lyase-like VSVS12_RS06795 PF01228 Glycine radical VSVS12_RS06805 PF00005 ABC transporter VSVS12_RS06810 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS06815 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS06820 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS06825 PF04397 LytTr DNA-binding domain VSVS12_RS06825 PF00072 Response regulator receiver domain VSVS12_RS06830 PF07694 5TMR of 5TMR-LYT VSVS12_RS06830 PF06580 Histidine kinase VSVS12_RS06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS06830 PF13492 GAF domain VSVS12_RS06845 PF02687 FtsX-like permease family VSVS12_RS06845 PF12704 MacB-like periplasmic core domain VSVS12_RS06850 PF00005 ABC transporter VSVS12_RS06885 PF01323 DSBA-like thioredoxin domain VSVS12_RS06895 PF00012 Hsp70 protein VSVS12_RS06900 PF00012 Hsp70 protein VSVS12_RS06910 PF08448 PAS fold VSVS12_RS06910 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS06940 PF00270 DEAD/DEAH box helicase VSVS12_RS06940 PF00271 Helicase conserved C-terminal domain VSVS12_RS06940 PF11898 Domain of unknown function (DUF3418) VSVS12_RS06940 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VSVS12_RS06940 PF04408 Helicase associated domain (HA2) VSVS12_RS06955 PF00375 Sodium:dicarboxylate symporter family VSVS12_RS06960 PF00290 Tryptophan synthase alpha chain VSVS12_RS06965 PF00291 Pyridoxal-phosphate dependent enzyme VSVS12_RS06970 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VSVS12_RS06970 PF00218 Indole-3-glycerol phosphate synthase VSVS12_RS06975 PF00591 Glycosyl transferase family, a/b domain VSVS12_RS06975 PF02885 Glycosyl transferase family, helical bundle domain VSVS12_RS06980 PF00117 Glutamine amidotransferase class-I VSVS12_RS06985 PF04715 Anthranilate synthase component I, N terminal region VSVS12_RS06985 PF00425 chorismate binding enzyme VSVS12_RS06995 PF02811 PHP domain VSVS12_RS07000 PF01300 Telomere recombination VSVS12_RS07005 PF00849 RNA pseudouridylate synthase VSVS12_RS07005 PF01479 S4 domain VSVS12_RS07010 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS07010 PF00072 Response regulator receiver domain VSVS12_RS07010 PF00672 HAMP domain VSVS12_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS07010 PF01627 Hpt domain VSVS12_RS07010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VSVS12_RS07015 PF00072 Response regulator receiver domain VSVS12_RS07020 PF00072 Response regulator receiver domain VSVS12_RS07035 PF01327 Polypeptide deformylase VSVS12_RS07050 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VSVS12_RS07050 PF01610 Transposase VSVS12_RS07050 PF13542 Helix-turn-helix domain of transposase family ISL3 VSVS12_RS07060 PF11953 Domain of unknown function (DUF3470) VSVS12_RS07060 PF00037 4Fe-4S binding domain VSVS12_RS07065 PF00588 SpoU rRNA Methylase family VSVS12_RS07065 PF08032 RNA 2'-O ribose methyltransferase substrate binding VSVS12_RS07100 PF00561 alpha/beta hydrolase fold VSVS12_RS07115 PF01734 Patatin-like phospholipase VSVS12_RS07130 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VSVS12_RS07130 PF00703 Glycosyl hydrolases family 2 VSVS12_RS07130 PF02837 Glycosyl hydrolases family 2, sugar binding domain VSVS12_RS07130 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 VSVS12_RS07150 PF01693 Caulimovirus viroplasmin VSVS12_RS07185 PF00849 RNA pseudouridylate synthase VSVS12_RS07185 PF01479 S4 domain VSVS12_RS07190 PF01380 SIS domain VSVS12_RS07195 PF00367 phosphotransferase system, EIIB VSVS12_RS07195 PF02378 Phosphotransferase system, EIIC VSVS12_RS07200 PF01418 Helix-turn-helix domain, rpiR family VSVS12_RS07200 PF01380 SIS domain VSVS12_RS07205 PF02656 Domain of unknown function (DUF202) VSVS12_RS07235 PF00753 Metallo-beta-lactamase superfamily VSVS12_RS07235 PF14864 Alkyl sulfatase C-terminal VSVS12_RS07235 PF14863 Alkyl sulfatase dimerisation VSVS12_RS07245 PF01844 HNH endonuclease VSVS12_RS07250 PF04261 Dyp-type peroxidase family VSVS12_RS07260 PF07859 alpha/beta hydrolase fold VSVS12_RS07270 PF07055 Enoyl reductase FAD binding domain VSVS12_RS07270 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VSVS12_RS07270 PF12241 Trans-2-enoyl-CoA reductase catalytic region VSVS12_RS07275 PF01575 MaoC like domain VSVS12_RS07280 PF01144 Coenzyme A transferase VSVS12_RS07285 PF03466 LysR substrate binding domain VSVS12_RS07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS07295 PF02803 Thiolase, C-terminal domain VSVS12_RS07295 PF00108 Thiolase, N-terminal domain VSVS12_RS07300 PF00226 DnaJ domain VSVS12_RS07300 PF00684 DnaJ central domain VSVS12_RS07300 PF01556 DnaJ C terminal domain VSVS12_RS07305 PF00012 Hsp70 protein VSVS12_RS07310 PF00011 Hsp20/alpha crystallin family VSVS12_RS07315 PF13167 GTP-binding GTPase N-terminal VSVS12_RS07315 PF16360 GTP-binding GTPase Middle Region VSVS12_RS07315 PF01926 50S ribosome-binding GTPase VSVS12_RS07320 PF00873 AcrB/AcrD/AcrF family VSVS12_RS07330 PF03773 Predicted permease VSVS12_RS07340 PF13006 Insertion element 4 transposase N-terminal VSVS12_RS07340 PF01609 Transposase DDE domain VSVS12_RS07350 PF01048 Phosphorylase superfamily VSVS12_RS07360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VSVS12_RS07360 PF12838 4Fe-4S dicluster domain VSVS12_RS07360 PF01568 Molydopterin dinucleotide binding domain VSVS12_RS07360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VSVS12_RS07360 PF00384 Molybdopterin oxidoreductase VSVS12_RS07385 PF01425 Amidase VSVS12_RS07395 PF12833 Helix-turn-helix domain VSVS12_RS07395 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VSVS12_RS07400 PF00704 Glycosyl hydrolases family 18 VSVS12_RS07400 PF06483 Chitinase C VSVS12_RS07405 PF13649 Methyltransferase domain VSVS12_RS07430 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS07430 PF08448 PAS fold VSVS12_RS07465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VSVS12_RS07465 PF01464 Transglycosylase SLT domain VSVS12_RS07475 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS07475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VSVS12_RS07500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS07500 PF17200 Single Cache domain 2 VSVS12_RS07500 PF00672 HAMP domain VSVS12_RS07505 PF00041 Fibronectin type III domain VSVS12_RS07505 PF00704 Glycosyl hydrolases family 18 VSVS12_RS07520 PF01979 Amidohydrolase family VSVS12_RS07530 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VSVS12_RS07550 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VSVS12_RS07555 PF01810 LysE type translocator VSVS12_RS07560 PF01235 Sodium:alanine symporter family VSVS12_RS07585 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS07585 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS07595 PF00266 Aminotransferase class-V VSVS12_RS07600 PF11842 Domain of unknown function (DUF3362) VSVS12_RS07600 PF04055 Radical SAM superfamily VSVS12_RS07600 PF08497 Radical SAM N-terminal VSVS12_RS07620 PF03466 LysR substrate binding domain VSVS12_RS07620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS07625 PF08267 Cobalamin-independent synthase, N-terminal domain VSVS12_RS07625 PF01717 Cobalamin-independent synthase, Catalytic domain VSVS12_RS07630 PF06826 Predicted Permease Membrane Region VSVS12_RS07630 PF02080 TrkA-C domain VSVS12_RS07635 PF00462 Glutaredoxin VSVS12_RS07640 PF00171 Aldehyde dehydrogenase family VSVS12_RS07640 PF00465 Iron-containing alcohol dehydrogenase VSVS12_RS07645 PF01380 SIS domain VSVS12_RS07645 PF01418 Helix-turn-helix domain, rpiR family VSVS12_RS07650 PF00282 Pyridoxal-dependent decarboxylase conserved domain VSVS12_RS07660 PF03956 Lysine exporter LysO VSVS12_RS07675 PF04993 TfoX N-terminal domain VSVS12_RS07675 PF04994 TfoX C-terminal domain VSVS12_RS07695 PF00873 AcrB/AcrD/AcrF family VSVS12_RS07715 PF01546 Peptidase family M20/M25/M40 VSVS12_RS07715 PF07687 Peptidase dimerisation domain VSVS12_RS07720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VSVS12_RS07725 PF04209 homogentisate 1,2-dioxygenase VSVS12_RS07735 PF14497 Glutathione S-transferase, C-terminal domain VSVS12_RS07735 PF02798 Glutathione S-transferase, N-terminal domain VSVS12_RS07750 PF00691 OmpA family VSVS12_RS07765 PF02913 FAD linked oxidases, C-terminal domain VSVS12_RS07765 PF13183 4Fe-4S dicluster domain VSVS12_RS07765 PF01565 FAD binding domain VSVS12_RS07770 PF04191 Phospholipid methyltransferase VSVS12_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS07780 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS07785 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS07790 PF00005 ABC transporter VSVS12_RS07810 PF00221 Aromatic amino acid lyase VSVS12_RS07815 PF17392 Urocanase C-terminal domain VSVS12_RS07815 PF17391 Urocanase N-terminal domain VSVS12_RS07815 PF01175 Urocanase Rossmann-like domain VSVS12_RS07820 PF00491 Arginase family VSVS12_RS07825 PF01979 Amidohydrolase family VSVS12_RS07830 PF00392 Bacterial regulatory proteins, gntR family VSVS12_RS07830 PF07702 UTRA domain VSVS12_RS07835 PF07070 SpoOM protein VSVS12_RS07850 PF05724 Thiopurine S-methyltransferase (TPMT) VSVS12_RS07855 PF02222 ATP-grasp domain VSVS12_RS07860 PF00939 Sodium:sulfate symporter transmembrane region VSVS12_RS07865 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS07865 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS07870 PF00072 Response regulator receiver domain VSVS12_RS07870 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS07870 PF00158 Sigma-54 interaction domain VSVS12_RS07875 PF01966 HD domain VSVS12_RS07875 PF11871 Domain of unknown function (DUF3391) VSVS12_RS07880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VSVS12_RS07880 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VSVS12_RS07885 PF04172 LrgB-like family VSVS12_RS07890 PF03788 LrgA family VSVS12_RS07895 PF00929 Exonuclease VSVS12_RS07895 PF08411 Exonuclease C-terminal VSVS12_RS07900 PF01042 Endoribonuclease L-PSP VSVS12_RS07905 PF00144 Beta-lactamase VSVS12_RS07910 PF13460 NAD(P)H-binding VSVS12_RS07915 PF01613 Flavin reductase like domain VSVS12_RS07920 PF02277 Phosphoribosyltransferase VSVS12_RS07925 PF02654 Cobalamin-5-phosphate synthase VSVS12_RS07930 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VSVS12_RS07945 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VSVS12_RS07950 PF01032 FecCD transport family VSVS12_RS07955 PF00005 ABC transporter VSVS12_RS07975 PF07690 Major Facilitator Superfamily VSVS12_RS07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS07980 PF03466 LysR substrate binding domain VSVS12_RS07985 PF01566 Natural resistance-associated macrophage protein VSVS12_RS07990 PF00491 Arginase family VSVS12_RS08000 PF01863 Protein of unknown function DUF45 VSVS12_RS08005 PF05971 RNA methyltransferase VSVS12_RS08015 PF04204 Homoserine O-succinyltransferase VSVS12_RS08035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VSVS12_RS08060 PF00672 HAMP domain VSVS12_RS08060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS08060 PF17200 Single Cache domain 2 VSVS12_RS08065 PF04055 Radical SAM superfamily VSVS12_RS08070 PF06508 Queuosine biosynthesis protein QueC VSVS12_RS08075 PF17151 Periplasmic sensor domain VSVS12_RS08075 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS08085 PF00691 OmpA family VSVS12_RS08085 PF05736 OprF membrane domain VSVS12_RS08105 PF10672 S-adenosylmethionine-dependent methyltransferase VSVS12_RS08105 PF17785 PUA-like domain VSVS12_RS08110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS08110 PF00672 HAMP domain VSVS12_RS08115 PF00708 Acylphosphatase VSVS12_RS08120 PF04358 DsrC like protein VSVS12_RS08125 PF01027 Inhibitor of apoptosis-promoting Bax1 VSVS12_RS08135 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS08140 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS08145 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS08150 PF14824 Sirohaem biosynthesis protein central VSVS12_RS08150 PF10414 Sirohaem synthase dimerisation region VSVS12_RS08150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VSVS12_RS08155 PF04461 Protein of unknown function (DUF520) VSVS12_RS08160 PF00793 DAHP synthetase I family VSVS12_RS08180 PF01189 16S rRNA methyltransferase RsmB/F VSVS12_RS08180 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VSVS12_RS08180 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VSVS12_RS08185 PF02470 MlaD protein VSVS12_RS08190 PF04403 Paraquat-inducible protein A VSVS12_RS08195 PF00664 ABC transporter transmembrane region VSVS12_RS08195 PF00005 ABC transporter VSVS12_RS08200 PF13185 GAF domain VSVS12_RS08205 PF17516 ProQ C-terminal domain VSVS12_RS08205 PF04352 ProQ/FINO family VSVS12_RS08210 PF17804 Tail specific protease N-terminal domain VSVS12_RS08210 PF03572 Peptidase family S41 VSVS12_RS08210 PF00595 PDZ domain VSVS12_RS08210 PF11818 C-terminal domain of tail specific protease (DUF3340) VSVS12_RS08220 PF11940 Domain of unknown function (DUF3458) Ig-like fold VSVS12_RS08220 PF01433 Peptidase family M1 domain VSVS12_RS08220 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VSVS12_RS08225 PF05088 Bacterial NAD-glutamate dehydrogenase VSVS12_RS08230 PF01180 Dihydroorotate dehydrogenase VSVS12_RS08235 PF07126 Cell-division protein ZapC VSVS12_RS08240 PF02926 THUMP domain VSVS12_RS08240 PF10672 S-adenosylmethionine-dependent methyltransferase VSVS12_RS08240 PF01170 Putative RNA methylase family UPF0020 VSVS12_RS08250 PF12848 ABC transporter VSVS12_RS08250 PF16326 ABC transporter C-terminal domain VSVS12_RS08250 PF00005 ABC transporter VSVS12_RS08260 PF04957 Ribosome modulation factor VSVS12_RS08265 PF07977 FabA-like domain VSVS12_RS08270 PF05362 Lon protease (S16) C-terminal proteolytic domain VSVS12_RS08270 PF13654 AAA domain VSVS12_RS08275 PF06303 MatP N-terminal domain VSVS12_RS08275 PF17414 MatP C-terminal ribbon-helix-helix domain VSVS12_RS08290 PF00115 Cytochrome C and Quinol oxidase polypeptide I VSVS12_RS08305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VSVS12_RS08305 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VSVS12_RS08315 PF00403 Heavy-metal-associated domain VSVS12_RS08330 PF00027 Cyclic nucleotide-binding domain VSVS12_RS08330 PF13545 Crp-like helix-turn-helix domain VSVS12_RS08335 PF00582 Universal stress protein family VSVS12_RS08340 PF01171 PP-loop family VSVS12_RS08360 PF08402 TOBE domain VSVS12_RS08360 PF00005 ABC transporter VSVS12_RS08365 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS08370 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS08375 PF13416 Bacterial extracellular solute-binding protein VSVS12_RS08380 PF13416 Bacterial extracellular solute-binding protein VSVS12_RS08385 PF02146 Sir2 family VSVS12_RS08390 PF00909 Ammonium Transporter Family VSVS12_RS08405 PF13247 4Fe-4S dicluster domain VSVS12_RS08410 PF00384 Molybdopterin oxidoreductase VSVS12_RS08410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VSVS12_RS08410 PF01568 Molydopterin dinucleotide binding domain VSVS12_RS08440 PF02634 FdhD/NarQ family VSVS12_RS08445 PF02743 Cache domain VSVS12_RS08445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS08445 PF00672 HAMP domain VSVS12_RS08450 PF00005 ABC transporter VSVS12_RS08450 PF12848 ABC transporter VSVS12_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS08455 PF03466 LysR substrate binding domain VSVS12_RS08460 PF08240 Alcohol dehydrogenase GroES-like domain VSVS12_RS08460 PF00107 Zinc-binding dehydrogenase VSVS12_RS08475 PF12561 ToxR activated gene A lipoprotein domain VSVS12_RS08475 PF17945 Beta/Gamma crystallin VSVS12_RS08480 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS08485 PF00158 Sigma-54 interaction domain VSVS12_RS08485 PF00072 Response regulator receiver domain VSVS12_RS08485 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS08490 PF12849 PBP superfamily domain VSVS12_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS08500 PF00005 ABC transporter VSVS12_RS08505 PF12804 MobA-like NTP transferase domain VSVS12_RS08510 PF03454 MoeA C-terminal region (domain IV) VSVS12_RS08510 PF00994 Probable molybdopterin binding domain VSVS12_RS08510 PF03453 MoeA N-terminal region (domain I and II) VSVS12_RS08520 PF00480 ROK family VSVS12_RS08525 PF03942 DTW domain VSVS12_RS08535 PF00672 HAMP domain VSVS12_RS08535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS08540 PF00877 NlpC/P60 family VSVS12_RS08550 PF03881 Fructosamine kinase VSVS12_RS08560 PF00677 Lumazine binding domain VSVS12_RS08565 PF01554 MatE VSVS12_RS08585 PF01810 LysE type translocator VSVS12_RS08600 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VSVS12_RS08605 PF00709 Adenylosuccinate synthetase VSVS12_RS08610 PF03466 LysR substrate binding domain VSVS12_RS08610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS08635 PF00919 Uncharacterized protein family UPF0004 VSVS12_RS08635 PF04055 Radical SAM superfamily VSVS12_RS08635 PF01938 TRAM domain VSVS12_RS08645 PF03466 LysR substrate binding domain VSVS12_RS08645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS08660 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VSVS12_RS08660 PF13542 Helix-turn-helix domain of transposase family ISL3 VSVS12_RS08660 PF01610 Transposase VSVS12_RS08680 PF02378 Phosphotransferase system, EIIC VSVS12_RS08680 PF00367 phosphotransferase system, EIIB VSVS12_RS08685 PF13580 SIS domain VSVS12_RS08690 PF01380 SIS domain VSVS12_RS08690 PF01418 Helix-turn-helix domain, rpiR family VSVS12_RS08695 PF14743 DNA ligase OB-like domain VSVS12_RS08695 PF01068 ATP dependent DNA ligase domain VSVS12_RS08720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VSVS12_RS08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS08720 PF00672 HAMP domain VSVS12_RS08720 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS08720 PF01627 Hpt domain VSVS12_RS08720 PF00072 Response regulator receiver domain VSVS12_RS08725 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS08725 PF00072 Response regulator receiver domain VSVS12_RS08725 PF00158 Sigma-54 interaction domain VSVS12_RS08735 PF00534 Glycosyl transferases group 1 VSVS12_RS08735 PF13439 Glycosyltransferase Family 4 VSVS12_RS08775 PF13439 Glycosyltransferase Family 4 VSVS12_RS08775 PF00534 Glycosyl transferases group 1 VSVS12_RS08785 PF02397 Bacterial sugar transferase VSVS12_RS08795 PF08448 PAS fold VSVS12_RS08795 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS08800 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VSVS12_RS08805 PF00480 ROK family VSVS12_RS08810 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS08810 PF03707 Bacterial signalling protein N terminal repeat VSVS12_RS08810 PF00563 EAL domain VSVS12_RS08830 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS08830 PF17151 Periplasmic sensor domain VSVS12_RS08840 PF00005 ABC transporter VSVS12_RS08845 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS08850 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS08855 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS08870 PF02472 Biopolymer transport protein ExbD/TolR VSVS12_RS08875 PF01618 MotA/TolQ/ExbB proton channel family VSVS12_RS08880 PF01618 MotA/TolQ/ExbB proton channel family VSVS12_RS08890 PF07715 TonB-dependent Receptor Plug Domain VSVS12_RS08890 PF00593 TonB dependent receptor VSVS12_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS08895 PF16527 Two-component sensor protein CpxA, periplasmic domain VSVS12_RS08895 PF00672 HAMP domain VSVS12_RS08895 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS08900 PF00072 Response regulator receiver domain VSVS12_RS08900 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS08910 PF16868 NMT1-like family VSVS12_RS08915 PF03009 Glycerophosphoryl diester phosphodiesterase family VSVS12_RS08925 PF01259 SAICAR synthetase VSVS12_RS08935 PF04055 Radical SAM superfamily VSVS12_RS08940 PF11230 Protein of unknown function (DUF3029) VSVS12_RS08945 PF00672 HAMP domain VSVS12_RS08945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS08945 PF02743 Cache domain VSVS12_RS08955 PF01810 LysE type translocator VSVS12_RS08960 PF00521 DNA gyrase/topoisomerase IV, subunit A VSVS12_RS08960 PF03989 DNA gyrase C-terminal domain, beta-propeller VSVS12_RS08975 PF03477 ATP cone domain VSVS12_RS08975 PF00317 Ribonucleotide reductase, all-alpha domain VSVS12_RS08975 PF02867 Ribonucleotide reductase, barrel domain VSVS12_RS08980 PF00268 Ribonucleotide reductase, small chain VSVS12_RS08985 PF00111 2Fe-2S iron-sulfur cluster binding domain VSVS12_RS08995 PF00994 Probable molybdopterin binding domain VSVS12_RS09010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VSVS12_RS09015 PF16653 Saccharopine dehydrogenase C-terminal domain VSVS12_RS09015 PF03435 Saccharopine dehydrogenase NADP binding domain VSVS12_RS09020 PF00202 Aminotransferase class-III VSVS12_RS09030 PF00691 OmpA family VSVS12_RS09035 PF06965 Na+/H+ antiporter 1 VSVS12_RS09045 PF02687 FtsX-like permease family VSVS12_RS09045 PF12704 MacB-like periplasmic core domain VSVS12_RS09050 PF00005 ABC transporter VSVS12_RS09055 PF01554 MatE VSVS12_RS09060 PF13460 NAD(P)H-binding VSVS12_RS09060 PF11066 Protein of unknown function (DUF2867) VSVS12_RS09065 PF08448 PAS fold VSVS12_RS09065 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS09065 PF00563 EAL domain VSVS12_RS09070 PF01235 Sodium:alanine symporter family VSVS12_RS09110 PF07690 Major Facilitator Superfamily VSVS12_RS09115 PF00849 RNA pseudouridylate synthase VSVS12_RS09115 PF01479 S4 domain VSVS12_RS09120 PF04851 Type III restriction enzyme, res subunit VSVS12_RS09120 PF00271 Helicase conserved C-terminal domain VSVS12_RS09130 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS09130 PF00072 Response regulator receiver domain VSVS12_RS09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS09140 PF07690 Major Facilitator Superfamily VSVS12_RS09145 PF12833 Helix-turn-helix domain VSVS12_RS09150 PF09335 SNARE associated Golgi protein VSVS12_RS09155 PF00535 Glycosyl transferase family 2 VSVS12_RS09155 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 VSVS12_RS09160 PF01386 Ribosomal L25p family VSVS12_RS09190 PF00563 EAL domain VSVS12_RS09190 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS09190 PF03707 Bacterial signalling protein N terminal repeat VSVS12_RS09195 PF00210 Ferritin-like domain VSVS12_RS09205 PF00356 Bacterial regulatory proteins, lacI family VSVS12_RS09210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VSVS12_RS09215 PF02378 Phosphotransferase system, EIIC VSVS12_RS09220 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VSVS12_RS09230 PF00196 Bacterial regulatory proteins, luxR family VSVS12_RS09230 PF00072 Response regulator receiver domain VSVS12_RS09235 PF17200 Single Cache domain 2 VSVS12_RS09235 PF07730 Histidine kinase VSVS12_RS09240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VSVS12_RS09250 PF03480 Bacterial extracellular solute-binding protein, family 7 VSVS12_RS09265 PF00753 Metallo-beta-lactamase superfamily VSVS12_RS09270 PF05951 Bacterial protein of unknown function (DUF882) VSVS12_RS09275 PF01471 Putative peptidoglycan binding domain VSVS12_RS09275 PF03734 L,D-transpeptidase catalytic domain VSVS12_RS09300 PF00925 GTP cyclohydrolase II VSVS12_RS09320 PF13302 Acetyltransferase (GNAT) domain VSVS12_RS09325 PF18024 Helix-turn-helix domain VSVS12_RS09325 PF00158 Sigma-54 interaction domain VSVS12_RS09330 PF05128 Domain of unknown function (DUF697) VSVS12_RS09335 PF04317 YcjX-like family, DUF463 VSVS12_RS09350 PF04715 Anthranilate synthase component I, N terminal region VSVS12_RS09350 PF00425 chorismate binding enzyme VSVS12_RS09355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS09355 PF00072 Response regulator receiver domain VSVS12_RS09355 PF09308 LuxQ, periplasmic VSVS12_RS09355 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS09365 PF00293 NUDIX domain VSVS12_RS09370 PF03222 Tryptophan/tyrosine permease family VSVS12_RS09375 PF03315 Serine dehydratase beta chain VSVS12_RS09375 PF03313 Serine dehydratase alpha chain VSVS12_RS09385 PF01242 6-pyruvoyl tetrahydropterin synthase VSVS12_RS09390 PF00672 HAMP domain VSVS12_RS09390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS09390 PF17200 Single Cache domain 2 VSVS12_RS09400 PF01336 OB-fold nucleic acid binding domain VSVS12_RS09400 PF00152 tRNA synthetases class II (D, K and N) VSVS12_RS09405 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 VSVS12_RS09405 PF13542 Helix-turn-helix domain of transposase family ISL3 VSVS12_RS09405 PF01610 Transposase VSVS12_RS09435 PF00155 Aminotransferase class I and II VSVS12_RS09455 PF03949 Malic enzyme, NAD binding domain VSVS12_RS09455 PF00390 Malic enzyme, N-terminal domain VSVS12_RS09465 PF02698 DUF218 domain VSVS12_RS09470 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS09470 PF00072 Response regulator receiver domain VSVS12_RS09480 PF00266 Aminotransferase class-V VSVS12_RS09490 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS09495 PF00664 ABC transporter transmembrane region VSVS12_RS09495 PF00005 ABC transporter VSVS12_RS09500 PF00664 ABC transporter transmembrane region VSVS12_RS09500 PF00005 ABC transporter VSVS12_RS09505 PF00557 Metallopeptidase family M24 VSVS12_RS09505 PF01321 Creatinase/Prolidase N-terminal domain VSVS12_RS09510 PF01037 Lrp/AsnC ligand binding domain VSVS12_RS09515 PF00171 Aldehyde dehydrogenase family VSVS12_RS09520 PF00202 Aminotransferase class-III VSVS12_RS09525 PF01641 SelR domain VSVS12_RS09525 PF01625 Peptide methionine sulfoxide reductase VSVS12_RS09545 PF00270 DEAD/DEAH box helicase VSVS12_RS09545 PF00271 Helicase conserved C-terminal domain VSVS12_RS09590 PF00440 Bacterial regulatory proteins, tetR family VSVS12_RS09595 PF00583 Acetyltransferase (GNAT) family VSVS12_RS09685 PF02028 BCCT, betaine/carnitine/choline family transporter VSVS12_RS09695 PF00171 Aldehyde dehydrogenase family VSVS12_RS09705 PF03466 LysR substrate binding domain VSVS12_RS09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS09720 PF00270 DEAD/DEAH box helicase VSVS12_RS09720 PF00271 Helicase conserved C-terminal domain VSVS12_RS09730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS09740 PF00581 Rhodanese-like domain VSVS12_RS09750 PF00375 Sodium:dicarboxylate symporter family VSVS12_RS09755 PF07992 Pyridine nucleotide-disulphide oxidoreductase VSVS12_RS09770 PF07702 UTRA domain VSVS12_RS09770 PF00392 Bacterial regulatory proteins, gntR family VSVS12_RS09775 PF00672 HAMP domain VSVS12_RS09775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS09775 PF02743 Cache domain VSVS12_RS09780 PF00132 Bacterial transferase hexapeptide (six repeats) VSVS12_RS09780 PF12464 Maltose acetyltransferase VSVS12_RS09785 PF13302 Acetyltransferase (GNAT) domain VSVS12_RS09795 PF03466 LysR substrate binding domain VSVS12_RS09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS09800 PF01554 MatE VSVS12_RS09820 PF01588 Putative tRNA binding domain VSVS12_RS09820 PF03147 Ferredoxin-fold anticodon binding domain VSVS12_RS09820 PF03484 tRNA synthetase B5 domain VSVS12_RS09820 PF03483 B3/4 domain VSVS12_RS09820 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VSVS12_RS09825 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VSVS12_RS09825 PF01409 tRNA synthetases class II core domain (F) VSVS12_RS09830 PF00583 Acetyltransferase (GNAT) family VSVS12_RS09835 PF00072 Response regulator receiver domain VSVS12_RS09835 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS09845 PF17131 Outer membrane lipoprotein-sorting protein VSVS12_RS09860 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS09890 PF01066 CDP-alcohol phosphatidyltransferase VSVS12_RS09895 PF08459 UvrC Helix-hairpin-helix N-terminal VSVS12_RS09895 PF02151 UvrB/uvrC motif VSVS12_RS09895 PF01541 GIY-YIG catalytic domain VSVS12_RS09900 PF00196 Bacterial regulatory proteins, luxR family VSVS12_RS09900 PF00072 Response regulator receiver domain VSVS12_RS09915 PF00136 DNA polymerase family B VSVS12_RS09915 PF03104 DNA polymerase family B, exonuclease domain VSVS12_RS09920 PF02378 Phosphotransferase system, EIIC VSVS12_RS09930 PF01132 Elongation factor P (EF-P) OB domain VSVS12_RS09930 PF08207 Elongation factor P (EF-P) KOW-like domain VSVS12_RS09930 PF09285 Elongation factor P, C-terminal VSVS12_RS09935 PF04269 Protein of unknown function, DUF440 VSVS12_RS09940 PF00216 Bacterial DNA-binding protein VSVS12_RS09945 PF00072 Response regulator receiver domain VSVS12_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS09955 PF04279 Intracellular septation protein A VSVS12_RS09960 PF03061 Thioesterase superfamily VSVS12_RS09965 PF03795 YCII-related domain VSVS12_RS09980 PF06945 Protein of unknown function (DUF1289) VSVS12_RS09990 PF13416 Bacterial extracellular solute-binding protein VSVS12_RS09995 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS10000 PF00005 ABC transporter VSVS12_RS10005 PF01066 CDP-alcohol phosphatidyltransferase VSVS12_RS10020 PF00849 RNA pseudouridylate synthase VSVS12_RS10025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS10025 PF12729 Four helix bundle sensory module for signal transduction VSVS12_RS10025 PF00672 HAMP domain VSVS12_RS10030 PF00209 Sodium:neurotransmitter symporter family VSVS12_RS10035 PF13396 Phospholipase_D-nuclease N-terminal VSVS12_RS10035 PF13091 PLD-like domain VSVS12_RS10045 PF03352 Methyladenine glycosylase VSVS12_RS10050 PF00873 AcrB/AcrD/AcrF family VSVS12_RS10055 PF13533 Biotin-lipoyl like VSVS12_RS10070 PF06667 Phage shock protein B VSVS12_RS10075 PF04012 PspA/IM30 family VSVS12_RS10080 PF00158 Sigma-54 interaction domain VSVS12_RS10080 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS10085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VSVS12_RS10090 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS10095 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS10095 PF12911 N-terminal TM domain of oligopeptide transport permease C VSVS12_RS10100 PF00005 ABC transporter VSVS12_RS10100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VSVS12_RS10105 PF00005 ABC transporter VSVS12_RS10110 PF02833 DHHA2 domain VSVS12_RS10110 PF01368 DHH family VSVS12_RS10125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VSVS12_RS10125 PF01502 Phosphoribosyl-AMP cyclohydrolase VSVS12_RS10130 PF00977 Histidine biosynthesis protein VSVS12_RS10135 PF00977 Histidine biosynthesis protein VSVS12_RS10140 PF00117 Glutamine amidotransferase class-I VSVS12_RS10145 PF08645 Polynucleotide kinase 3 phosphatase VSVS12_RS10145 PF00475 Imidazoleglycerol-phosphate dehydratase VSVS12_RS10150 PF00155 Aminotransferase class I and II VSVS12_RS10155 PF00815 Histidinol dehydrogenase VSVS12_RS10160 PF08029 HisG, C-terminal domain VSVS12_RS10160 PF01634 ATP phosphoribosyltransferase VSVS12_RS10165 PF03553 Na+/H+ antiporter family VSVS12_RS10170 PF00816 H-NS histone family VSVS12_RS10175 PF00294 pfkB family carbohydrate kinase VSVS12_RS10190 PF04356 Protein of unknown function (DUF489) VSVS12_RS10195 PF00206 Lyase VSVS12_RS10195 PF08328 Adenylosuccinate lyase C-terminal VSVS12_RS10240 PF01435 Peptidase family M48 VSVS12_RS10250 PF08241 Methyltransferase domain VSVS12_RS10255 PF00155 Aminotransferase class I and II VSVS12_RS10260 PF06968 Biotin and Thiamin Synthesis associated domain VSVS12_RS10260 PF04055 Radical SAM superfamily VSVS12_RS10265 PF00202 Aminotransferase class-III VSVS12_RS10270 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VSVS12_RS10280 PF13307 Helicase C-terminal domain VSVS12_RS10280 PF06733 DEAD_2 VSVS12_RS10285 PF01925 Sulfite exporter TauE/SafE VSVS12_RS10290 PF07445 Primosomal replication protein priC VSVS12_RS10295 PF10689 Protein of unknown function (DUF2496) VSVS12_RS10300 PF08007 Cupin superfamily protein VSVS12_RS10305 PF03372 Endonuclease/Exonuclease/phosphatase family VSVS12_RS10310 PF00005 ABC transporter VSVS12_RS10310 PF00664 ABC transporter transmembrane region VSVS12_RS10315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VSVS12_RS10315 PF00529 HlyD membrane-fusion protein of T1SS VSVS12_RS10325 PF07055 Enoyl reductase FAD binding domain VSVS12_RS10325 PF12241 Trans-2-enoyl-CoA reductase catalytic region VSVS12_RS10325 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VSVS12_RS10330 PF09317 Domain of unknown function (DUF1974) VSVS12_RS10330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VSVS12_RS10330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VSVS12_RS10335 PF00440 Bacterial regulatory proteins, tetR family VSVS12_RS10345 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase VSVS12_RS10350 PF00535 Glycosyl transferase family 2 VSVS12_RS10355 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS10355 PF00072 Response regulator receiver domain VSVS12_RS10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS10360 PF00672 HAMP domain VSVS12_RS10360 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS10375 PF14376 Haem-binding domain VSVS12_RS10375 PF00034 Cytochrome c VSVS12_RS10375 PF03150 Di-haem cytochrome c peroxidase VSVS12_RS10380 PF09308 LuxQ, periplasmic VSVS12_RS10380 PF00072 Response regulator receiver domain VSVS12_RS10380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS10380 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS10390 PF01979 Amidohydrolase family VSVS12_RS10395 PF10063 Uncharacterized integral membrane protein (DUF2301) VSVS12_RS10410 PF13421 SPFH domain-Band 7 family VSVS12_RS10430 PF02472 Biopolymer transport protein ExbD/TolR VSVS12_RS10435 PF01618 MotA/TolQ/ExbB proton channel family VSVS12_RS10440 PF01618 MotA/TolQ/ExbB proton channel family VSVS12_RS10450 PF07715 TonB-dependent Receptor Plug Domain VSVS12_RS10455 PF00005 ABC transporter VSVS12_RS10455 PF06472 ABC transporter transmembrane region 2 VSVS12_RS10460 PF05193 Peptidase M16 inactive domain VSVS12_RS10460 PF00675 Insulinase (Peptidase family M16) VSVS12_RS10465 PF00294 pfkB family carbohydrate kinase VSVS12_RS10475 PF03747 ADP-ribosylglycohydrolase VSVS12_RS10480 PF00392 Bacterial regulatory proteins, gntR family VSVS12_RS10480 PF00155 Aminotransferase class I and II VSVS12_RS10485 PF13391 HNH endonuclease VSVS12_RS10500 PF06610 L-alanine exporter VSVS12_RS10505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS10505 PF00072 Response regulator receiver domain VSVS12_RS10505 PF09308 LuxQ, periplasmic VSVS12_RS10505 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS10520 PF02445 Quinolinate synthetase A protein VSVS12_RS10525 PF16331 TolA binding protein trimerisation VSVS12_RS10525 PF13174 Tetratricopeptide repeat VSVS12_RS10530 PF00691 OmpA family VSVS12_RS10535 PF04052 TolB amino-terminal domain VSVS12_RS10535 PF07676 WD40-like Beta Propeller Repeat VSVS12_RS10545 PF02472 Biopolymer transport protein ExbD/TolR VSVS12_RS10550 PF01618 MotA/TolQ/ExbB proton channel family VSVS12_RS10555 PF03061 Thioesterase superfamily VSVS12_RS10565 PF08173 Membrane bound YbgT-like protein VSVS12_RS10570 PF02322 Cytochrome bd terminal oxidase subunit II VSVS12_RS10575 PF01654 Cytochrome bd terminal oxidase subunit I VSVS12_RS10580 PF05491 RuvB C-terminal winged helix domain VSVS12_RS10580 PF05496 Holliday junction DNA helicase RuvB P-loop domain VSVS12_RS10580 PF17864 RuvB AAA lid domain VSVS12_RS10585 PF07499 RuvA, C-terminal domain VSVS12_RS10585 PF01330 RuvA N terminal domain VSVS12_RS10590 PF02075 Crossover junction endodeoxyribonuclease RuvC VSVS12_RS10600 PF18364 Molybdopterin oxidoreductase N-terminal domain VSVS12_RS10600 PF00384 Molybdopterin oxidoreductase VSVS12_RS10600 PF01568 Molydopterin dinucleotide binding domain VSVS12_RS10605 PF03264 NapC/NirT cytochrome c family, N-terminal region VSVS12_RS10610 PF06796 Periplasmic nitrate reductase protein NapE VSVS12_RS10615 PF03649 Uncharacterised protein family (UPF0014) VSVS12_RS10620 PF01226 Formate/nitrite transporter VSVS12_RS10635 PF03466 LysR substrate binding domain VSVS12_RS10635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS10650 PF17871 AAA lid domain VSVS12_RS10650 PF00004 ATPase family associated with various cellular activities (AAA) VSVS12_RS10650 PF07724 AAA domain (Cdc48 subfamily) VSVS12_RS10650 PF10431 C-terminal, D2-small domain, of ClpB protein VSVS12_RS10650 PF02861 Clp amino terminal domain, pathogenicity island component VSVS12_RS10655 PF02617 ATP-dependent Clp protease adaptor protein ClpS VSVS12_RS10660 PF00313 'Cold-shock' DNA-binding domain VSVS12_RS10665 PF03971 Monomeric isocitrate dehydrogenase VSVS12_RS10670 PF00849 RNA pseudouridylate synthase VSVS12_RS10680 PF11412 Disulphide bond corrector protein DsbC VSVS12_RS10680 PF02683 Cytochrome C biogenesis protein transmembrane region VSVS12_RS10685 PF00085 Thioredoxin VSVS12_RS10690 PF02938 GAD domain VSVS12_RS10690 PF01336 OB-fold nucleic acid binding domain VSVS12_RS10690 PF00152 tRNA synthetases class II (D, K and N) VSVS12_RS10695 PF01904 Protein of unknown function DUF72 VSVS12_RS10700 PF13649 Methyltransferase domain VSVS12_RS10705 PF08003 Protein of unknown function (DUF1698) VSVS12_RS10710 PF18030 RimK PreATP-grasp domain VSVS12_RS10710 PF08443 RimK-like ATP-grasp domain VSVS12_RS10725 PF00892 EamA-like transporter family VSVS12_RS10730 PF04310 MukB N-terminal VSVS12_RS10730 PF16330 MukB hinge domain VSVS12_RS10735 PF04288 MukE-like family VSVS12_RS10740 PF17193 MukF C-terminal domain VSVS12_RS10740 PF03882 MukF winged-helix domain VSVS12_RS10740 PF17192 MukF middle domain VSVS12_RS10745 PF13847 Methyltransferase domain VSVS12_RS10750 PF02698 DUF218 domain VSVS12_RS10755 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS10755 PF00072 Response regulator receiver domain VSVS12_RS10760 PF02613 Nitrate reductase delta subunit VSVS12_RS10765 PF00356 Bacterial regulatory proteins, lacI family VSVS12_RS10770 PF04994 TfoX C-terminal domain VSVS12_RS10770 PF04993 TfoX N-terminal domain VSVS12_RS10785 PF00561 alpha/beta hydrolase fold VSVS12_RS10790 PF08323 Starch synthase catalytic domain VSVS12_RS10790 PF00534 Glycosyl transferases group 1 VSVS12_RS10795 PF00483 Nucleotidyl transferase VSVS12_RS10800 PF01396 Topoisomerase DNA binding C4 zinc finger VSVS12_RS10800 PF01751 Toprim domain VSVS12_RS10800 PF01131 DNA topoisomerase VSVS12_RS10800 PF08272 Topoisomerase I zinc-ribbon-like VSVS12_RS10805 PF10692 Protein of unknown function (DUF2498) VSVS12_RS10810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VSVS12_RS10815 PF05433 Glycine zipper 2TM domain VSVS12_RS10820 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VSVS12_RS10825 PF04376 Arginine-tRNA-protein transferase, N terminus VSVS12_RS10825 PF04377 Arginine-tRNA-protein transferase, C terminus VSVS12_RS10830 PF01176 Translation initiation factor 1A / IF-1 VSVS12_RS10835 PF00265 Thymidine kinase VSVS12_RS10840 PF01406 tRNA synthetases class I (C) catalytic domain VSVS12_RS10840 PF09190 DALR domain VSVS12_RS10845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VSVS12_RS10850 PF00149 Calcineurin-like phosphoesterase VSVS12_RS10855 PF00563 EAL domain VSVS12_RS10855 PF08668 HDOD domain VSVS12_RS10860 PF02810 SEC-C motif VSVS12_RS10865 PF07023 Protein of unknown function (DUF1315) VSVS12_RS10875 PF01641 SelR domain VSVS12_RS10880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSVS12_RS10880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VSVS12_RS10885 PF01263 Aldose 1-epimerase VSVS12_RS10890 PF13847 Methyltransferase domain VSVS12_RS10900 PF02028 BCCT, betaine/carnitine/choline family transporter VSVS12_RS10905 PF00924 Mechanosensitive ion channel VSVS12_RS10905 PF05552 Conserved TM helix VSVS12_RS10910 PF03692 Putative zinc- or iron-chelating domain VSVS12_RS10915 PF04226 Transglycosylase associated protein VSVS12_RS10920 PF03692 Putative zinc- or iron-chelating domain VSVS12_RS10930 PF00230 Major intrinsic protein VSVS12_RS10940 PF02132 RecR protein VSVS12_RS10940 PF13662 Toprim domain VSVS12_RS10945 PF02575 YbaB/EbfC DNA-binding family VSVS12_RS10950 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VSVS12_RS10950 PF12169 DNA polymerase III subunits gamma and tau domain III VSVS12_RS10950 PF12170 DNA polymerase III tau subunit V interacting with alpha VSVS12_RS10955 PF00156 Phosphoribosyl transferase domain VSVS12_RS10960 PF04304 Protein of unknown function (DUF454) VSVS12_RS10965 PF00072 Response regulator receiver domain VSVS12_RS10970 PF03466 LysR substrate binding domain VSVS12_RS10970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS10975 PF00881 Nitroreductase family VSVS12_RS10980 PF00378 Enoyl-CoA hydratase/isomerase VSVS12_RS10980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VSVS12_RS10980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VSVS12_RS10985 PF00108 Thiolase, N-terminal domain VSVS12_RS10985 PF02803 Thiolase, C-terminal domain VSVS12_RS10990 PF04542 Sigma-70 region 2 VSVS12_RS10990 PF08281 Sigma-70, region 4 VSVS12_RS11000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VSVS12_RS11005 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VSVS12_RS11010 PF04333 MlaA lipoprotein VSVS12_RS11020 PF03918 Cytochrome C biogenesis protein VSVS12_RS11025 PF08534 Redoxin VSVS12_RS11030 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VSVS12_RS11030 PF01578 Cytochrome C assembly protein VSVS12_RS11035 PF03100 CcmE VSVS12_RS11045 PF01578 Cytochrome C assembly protein VSVS12_RS11050 PF03379 CcmB protein VSVS12_RS11055 PF00005 ABC transporter VSVS12_RS11065 PF01584 CheW-like domain VSVS12_RS11075 PF13614 AAA domain VSVS12_RS11080 PF00072 Response regulator receiver domain VSVS12_RS11080 PF01339 CheB methylesterase VSVS12_RS11085 PF00072 Response regulator receiver domain VSVS12_RS11085 PF01627 Hpt domain VSVS12_RS11085 PF01584 CheW-like domain VSVS12_RS11085 PF02895 Signal transducing histidine kinase, homodimeric domain VSVS12_RS11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS11090 PF04344 Chemotaxis phosphatase, CheZ VSVS12_RS11095 PF00072 Response regulator receiver domain VSVS12_RS11100 PF04539 Sigma-70 region 3 VSVS12_RS11100 PF04545 Sigma-70, region 4 VSVS12_RS11100 PF04542 Sigma-70 region 2 VSVS12_RS11105 PF10609 NUBPL iron-transfer P-loop NTPase VSVS12_RS11110 PF00448 SRP54-type protein, GTPase domain VSVS12_RS11115 PF00771 FHIPEP family VSVS12_RS11125 PF00300 Histidine phosphatase superfamily (branch 1) VSVS12_RS11130 PF05193 Peptidase M16 inactive domain VSVS12_RS11130 PF00675 Insulinase (Peptidase family M16) VSVS12_RS11135 PF06185 YecM protein VSVS12_RS11140 PF00750 tRNA synthetases class I (R) VSVS12_RS11140 PF05746 DALR anticodon binding domain VSVS12_RS11140 PF03485 Arginyl tRNA synthetase N terminal domain VSVS12_RS11155 PF07670 Nucleoside recognition VSVS12_RS11155 PF02421 Ferrous iron transport protein B VSVS12_RS11155 PF07664 Ferrous iron transport protein B C terminus VSVS12_RS11160 PF04023 FeoA domain VSVS12_RS11170 PF01297 Zinc-uptake complex component A periplasmic VSVS12_RS11175 PF00005 ABC transporter VSVS12_RS11180 PF00950 ABC 3 transport family VSVS12_RS11185 PF00156 Phosphoribosyl transferase domain VSVS12_RS11190 PF02674 Colicin V production protein VSVS12_RS11195 PF05036 Sporulation related domain VSVS12_RS11200 PF08245 Mur ligase middle domain VSVS12_RS11200 PF02875 Mur ligase family, glutamate ligase domain VSVS12_RS11205 PF17848 Acetyl-coA carboxylase zinc finger domain VSVS12_RS11205 PF01039 Carboxyl transferase domain VSVS12_RS11210 PF01416 tRNA pseudouridine synthase VSVS12_RS11220 PF02774 Semialdehyde dehydrogenase, dimerisation domain VSVS12_RS11220 PF01118 Semialdehyde dehydrogenase, NAD binding domain VSVS12_RS11225 PF11890 Domain of unknown function (DUF3410) VSVS12_RS11225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VSVS12_RS11225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VSVS12_RS11230 PF02801 Beta-ketoacyl synthase, C-terminal domain VSVS12_RS11230 PF00109 Beta-ketoacyl synthase, N-terminal domain VSVS12_RS11235 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_RS11235 PF01266 FAD dependent oxidoreductase VSVS12_RS11245 PF08891 YfcL protein VSVS12_RS11265 PF04315 Elongation factor P hydroxylase VSVS12_RS11270 PF03458 UPF0126 domain VSVS12_RS11275 PF01264 Chorismate synthase VSVS12_RS11280 PF05175 Methyltransferase small domain VSVS12_RS11285 PF01713 Smr domain VSVS12_RS11295 PF01312 FlhB HrpN YscU SpaS Family VSVS12_RS11300 PF01311 Bacterial export proteins, family 1 VSVS12_RS11305 PF01313 Bacterial export proteins, family 3 VSVS12_RS11310 PF00813 FliP family VSVS12_RS11315 PF04347 Flagellar biosynthesis protein, FliO VSVS12_RS11320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VSVS12_RS11325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VSVS12_RS11325 PF02154 Flagellar motor switch protein FliM VSVS12_RS11345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VSVS12_RS11345 PF18269 T3SS EscN ATPase C-terminal domain VSVS12_RS11355 PF14842 FliG N-terminal domain VSVS12_RS11355 PF14841 FliG middle domain VSVS12_RS11355 PF01706 FliG C-terminal domain VSVS12_RS11360 PF01514 Secretory protein of YscJ/FliF family VSVS12_RS11360 PF08345 Flagellar M-ring protein C-terminal VSVS12_RS11365 PF02049 Flagellar hook-basal body complex protein FliE VSVS12_RS11370 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS11370 PF00158 Sigma-54 interaction domain VSVS12_RS11370 PF00072 Response regulator receiver domain VSVS12_RS11375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS11375 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS11375 PF13188 PAS domain VSVS12_RS11380 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS11380 PF06490 Flagellar regulatory protein FleQ VSVS12_RS11380 PF00158 Sigma-54 interaction domain VSVS12_RS11385 PF02561 Flagellar protein FliS VSVS12_RS11395 PF07195 Flagellar hook-associated protein 2 C-terminus VSVS12_RS11395 PF07196 Flagellin hook IN motif VSVS12_RS11395 PF02465 Flagellar hook-associated protein 2 N-terminus VSVS12_RS11400 PF03646 FlaG protein VSVS12_RS11405 PF00669 Bacterial flagellin N-terminal helical region VSVS12_RS11405 PF07196 Flagellin hook IN motif VSVS12_RS11405 PF00700 Bacterial flagellin C-terminal helical region VSVS12_RS11410 PF00700 Bacterial flagellin C-terminal helical region VSVS12_RS11410 PF07196 Flagellin hook IN motif VSVS12_RS11410 PF00669 Bacterial flagellin N-terminal helical region VSVS12_RS11415 PF07196 Flagellin hook IN motif VSVS12_RS11415 PF00700 Bacterial flagellin C-terminal helical region VSVS12_RS11415 PF00669 Bacterial flagellin N-terminal helical region VSVS12_RS11420 PF04261 Dyp-type peroxidase family VSVS12_RS11425 PF11143 Protein of unknown function (DUF2919) VSVS12_RS11430 PF03918 Cytochrome C biogenesis protein VSVS12_RS11435 PF08534 Redoxin VSVS12_RS11440 PF01578 Cytochrome C assembly protein VSVS12_RS11440 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VSVS12_RS11445 PF03916 Polysulphide reductase, NrfD VSVS12_RS11450 PF13247 4Fe-4S dicluster domain VSVS12_RS11460 PF02335 Cytochrome c552 VSVS12_RS11485 PF03960 ArsC family VSVS12_RS11490 PF01546 Peptidase family M20/M25/M40 VSVS12_RS11490 PF07687 Peptidase dimerisation domain VSVS12_RS11505 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VSVS12_RS11510 PF07348 Syd protein (SUKH-2) VSVS12_RS11515 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VSVS12_RS11515 PF14489 QueF-like protein VSVS12_RS11525 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS11530 PF11892 Domain of unknown function (DUF3412) VSVS12_RS11530 PF03641 Possible lysine decarboxylase VSVS12_RS11530 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VSVS12_RS11535 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VSVS12_RS11535 PF01367 5'-3' exonuclease, C-terminal SAM fold VSVS12_RS11540 PF13006 Insertion element 4 transposase N-terminal VSVS12_RS11540 PF01609 Transposase DDE domain VSVS12_RS11545 PF18125 RlmM ferredoxin-like domain VSVS12_RS11545 PF01728 FtsJ-like methyltransferase VSVS12_RS11550 PF04241 Protein of unknown function (DUF423) VSVS12_RS11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS11560 PF03466 LysR substrate binding domain VSVS12_RS11570 PF01527 Transposase VSVS12_RS11575 PF13276 HTH-like domain VSVS12_RS11575 PF00665 Integrase core domain VSVS12_RS11575 PF13333 Integrase core domain VSVS12_RS11580 PF02926 THUMP domain VSVS12_RS11580 PF02568 Thiamine biosynthesis protein (ThiI) VSVS12_RS11585 PF00691 OmpA family VSVS12_RS11585 PF13677 Membrane MotB of proton-channel complex MotA/MotB VSVS12_RS11590 PF01618 MotA/TolQ/ExbB proton channel family VSVS12_RS11595 PF02609 Exonuclease VII small subunit VSVS12_RS11600 PF00348 Polyprenyl synthetase VSVS12_RS11605 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VSVS12_RS11605 PF02780 Transketolase, C-terminal domain VSVS12_RS11605 PF02779 Transketolase, pyrimidine binding domain VSVS12_RS11625 PF00849 RNA pseudouridylate synthase VSVS12_RS11630 PF04287 tRNA pseudouridine synthase C VSVS12_RS11655 PF02629 CoA binding domain VSVS12_RS11655 PF00549 CoA-ligase VSVS12_RS11660 PF08442 ATP-grasp domain VSVS12_RS11660 PF00549 CoA-ligase VSVS12_RS11665 PF00364 Biotin-requiring enzyme VSVS12_RS11665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VSVS12_RS11665 PF02817 e3 binding domain VSVS12_RS11670 PF02779 Transketolase, pyrimidine binding domain VSVS12_RS11670 PF16870 2-oxoglutarate dehydrogenase C-terminal VSVS12_RS11670 PF16078 2-oxoglutarate dehydrogenase N-terminus VSVS12_RS11670 PF00676 Dehydrogenase E1 component VSVS12_RS11675 PF13085 2Fe-2S iron-sulfur cluster binding domain VSVS12_RS11680 PF00890 FAD binding domain VSVS12_RS11680 PF02910 Fumarate reductase flavoprotein C-term VSVS12_RS11685 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VSVS12_RS11690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VSVS12_RS11695 PF00285 Citrate synthase, C-terminal domain VSVS12_RS11700 PF01784 NIF3 (NGG1p interacting factor 3) VSVS12_RS11715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VSVS12_RS11715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VSVS12_RS11715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VSVS12_RS11715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VSVS12_RS11720 PF03925 SeqA protein C-terminal domain VSVS12_RS11720 PF17206 SeqA protein N-terminal domain VSVS12_RS11725 PF12697 Alpha/beta hydrolase family VSVS12_RS11735 PF00258 Flavodoxin VSVS12_RS11745 PF01475 Ferric uptake regulator family VSVS12_RS11750 PF00749 tRNA synthetases class I (E and Q), catalytic domain VSVS12_RS11750 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VSVS12_RS11755 PF02378 Phosphotransferase system, EIIC VSVS12_RS11755 PF00367 phosphotransferase system, EIIB VSVS12_RS11755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VSVS12_RS11760 PF01979 Amidohydrolase family VSVS12_RS11765 PF01047 MarR family VSVS12_RS11765 PF00480 ROK family VSVS12_RS11770 PF02254 TrkA-N domain VSVS12_RS11770 PF00999 Sodium/hydrogen exchanger family VSVS12_RS11775 PF00733 Asparagine synthase VSVS12_RS11775 PF13537 Glutamine amidotransferase domain VSVS12_RS11780 PF00854 POT family VSVS12_RS11800 PF01713 Smr domain VSVS12_RS11805 PF00849 RNA pseudouridylate synthase VSVS12_RS11805 PF01479 S4 domain VSVS12_RS11815 PF00586 AIR synthase related protein, N-terminal domain VSVS12_RS11815 PF02769 AIR synthase related protein, C-terminal domain VSVS12_RS11820 PF00551 Formyl transferase VSVS12_RS11830 PF06786 Uncharacterised protein family (UPF0253) VSVS12_RS11845 PF02769 AIR synthase related protein, C-terminal domain VSVS12_RS11845 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VSVS12_RS11845 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VSVS12_RS11850 PF01464 Transglycosylase SLT domain VSVS12_RS11850 PF00497 Bacterial extracellular solute-binding proteins, family 3 VSVS12_RS11855 PF14437 MafB19-like deaminase VSVS12_RS11860 PF01595 Cyclin M transmembrane N-terminal domain VSVS12_RS11860 PF03471 Transporter associated domain VSVS12_RS11860 PF00571 CBS domain VSVS12_RS11865 PF03806 AbgT putative transporter family VSVS12_RS11895 PF01556 DnaJ C terminal domain VSVS12_RS11895 PF00684 DnaJ central domain VSVS12_RS11895 PF00226 DnaJ domain VSVS12_RS11900 PF00012 Hsp70 protein VSVS12_RS11905 PF13276 HTH-like domain VSVS12_RS11905 PF00665 Integrase core domain VSVS12_RS11905 PF13333 Integrase core domain VSVS12_RS11915 PF00375 Sodium:dicarboxylate symporter family VSVS12_RS11920 PF01025 GrpE VSVS12_RS11925 PF01513 ATP-NAD kinase VSVS12_RS11935 PF02463 RecF/RecN/SMC N terminal domain VSVS12_RS11940 PF04355 SmpA / OmlA family VSVS12_RS11945 PF03658 RnfH family Ubiquitin VSVS12_RS11950 PF03364 Polyketide cyclase / dehydrase and lipid transport VSVS12_RS11955 PF01668 SmpB protein VSVS12_RS11970 PF00924 Mechanosensitive ion channel VSVS12_RS11980 PF01979 Amidohydrolase family VSVS12_RS11990 PF00583 Acetyltransferase (GNAT) family VSVS12_RS11990 PF00795 Carbon-nitrogen hydrolase VSVS12_RS11995 PF12729 Four helix bundle sensory module for signal transduction VSVS12_RS11995 PF00672 HAMP domain VSVS12_RS11995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS12000 PF10996 Beta-Casp domain VSVS12_RS12000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VSVS12_RS12000 PF00753 Metallo-beta-lactamase superfamily VSVS12_RS12005 PF00367 phosphotransferase system, EIIB VSVS12_RS12005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VSVS12_RS12005 PF02378 Phosphotransferase system, EIIC VSVS12_RS12010 PF05661 Protein of unknown function (DUF808) VSVS12_RS12015 PF01053 Cys/Met metabolism PLP-dependent enzyme VSVS12_RS12020 PF01235 Sodium:alanine symporter family VSVS12_RS12025 PF01184 GPR1/FUN34/yaaH family VSVS12_RS12030 PF03553 Na+/H+ antiporter family VSVS12_RS12035 PF02540 NAD synthase VSVS12_RS12035 PF00958 GMP synthase C terminal domain VSVS12_RS12035 PF00117 Glutamine amidotransferase class-I VSVS12_RS12040 PF00478 IMP dehydrogenase / GMP reductase domain VSVS12_RS12040 PF00571 CBS domain VSVS12_RS12045 PF02601 Exonuclease VII, large subunit VSVS12_RS12045 PF13742 OB-fold nucleic acid binding domain VSVS12_RS12060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VSVS12_RS12060 PF01926 50S ribosome-binding GTPase VSVS12_RS12065 PF13360 PQQ-like domain VSVS12_RS12070 PF09976 Tetratricopeptide repeat-like domain VSVS12_RS12075 PF13393 Histidyl-tRNA synthetase VSVS12_RS12075 PF03129 Anticodon binding domain VSVS12_RS12080 PF04551 GcpE protein VSVS12_RS12085 PF13464 Domain of unknown function (DUF4115) VSVS12_RS12090 PF04055 Radical SAM superfamily VSVS12_RS12095 PF02657 Fe-S metabolism associated domain VSVS12_RS12100 PF00899 ThiF family VSVS12_RS12105 PF03562 MltA specific insert domain VSVS12_RS12105 PF06725 3D domain VSVS12_RS12115 PF00583 Acetyltransferase (GNAT) family VSVS12_RS12115 PF00696 Amino acid kinase family VSVS12_RS12125 PF13538 UvrD-like helicase C-terminal domain VSVS12_RS12130 PF13361 UvrD-like helicase C-terminal domain VSVS12_RS12130 PF12705 PD-(D/E)XK nuclease superfamily VSVS12_RS12130 PF00580 UvrD/REP helicase N-terminal domain VSVS12_RS12135 PF17946 RecC C-terminal domain VSVS12_RS12145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS12145 PF03466 LysR substrate binding domain VSVS12_RS12150 PF07130 YebG protein VSVS12_RS12155 PF00873 AcrB/AcrD/AcrF family VSVS12_RS12160 PF13533 Biotin-lipoyl like VSVS12_RS12185 PF03932 CutC family VSVS12_RS12190 PF01895 PhoU domain VSVS12_RS12195 PF00005 ABC transporter VSVS12_RS12200 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS12205 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS12210 PF02541 Ppx/GppA phosphatase family VSVS12_RS12215 PF12849 PBP superfamily domain VSVS12_RS12220 PF11808 Phosphate regulon sensor protein PhoR VSVS12_RS12220 PF00989 PAS fold VSVS12_RS12220 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS12225 PF00072 Response regulator receiver domain VSVS12_RS12225 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS12230 PF04381 Putative exonuclease, RdgC VSVS12_RS12235 PF01136 Peptidase family U32 VSVS12_RS12235 PF16325 Peptidase family U32 C-terminal domain VSVS12_RS12240 PF00037 4Fe-4S binding domain VSVS12_RS12250 PF03411 Penicillin-insensitive murein endopeptidase VSVS12_RS12260 PF02355 Protein export membrane protein VSVS12_RS12260 PF07549 SecD/SecF GG Motif VSVS12_RS12265 PF02355 Protein export membrane protein VSVS12_RS12265 PF07549 SecD/SecF GG Motif VSVS12_RS12265 PF13721 SecD export protein N-terminal TM region VSVS12_RS12270 PF02699 Preprotein translocase subunit VSVS12_RS12275 PF01702 Queuine tRNA-ribosyltransferase VSVS12_RS12280 PF02547 Queuosine biosynthesis protein VSVS12_RS12285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS12285 PF00672 HAMP domain VSVS12_RS12285 PF12729 Four helix bundle sensory module for signal transduction VSVS12_RS12290 PF00571 CBS domain VSVS12_RS12295 PF00463 Isocitrate lyase family VSVS12_RS12300 PF01274 Malate synthase VSVS12_RS12305 PF03466 LysR substrate binding domain VSVS12_RS12305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS12310 PF00578 AhpC/TSA family VSVS12_RS12310 PF10417 C-terminal domain of 1-Cys peroxiredoxin VSVS12_RS12325 PF14602 Hexapeptide repeat of succinyl-transferase VSVS12_RS12325 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VSVS12_RS12330 PF01464 Transglycosylase SLT domain VSVS12_RS12330 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VSVS12_RS12355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS12355 PF03466 LysR substrate binding domain VSVS12_RS12365 PF00691 OmpA family VSVS12_RS12400 PF00437 Type II/IV secretion system protein VSVS12_RS12415 PF13629 Pilus formation protein N terminal region VSVS12_RS12415 PF00263 Bacterial type II and III secretion system protein VSVS12_RS12415 PF04972 BON domain VSVS12_RS12450 PF00501 AMP-binding enzyme VSVS12_RS12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS12455 PF03466 LysR substrate binding domain VSVS12_RS12460 PF03144 Elongation factor Tu domain 2 VSVS12_RS12460 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS12460 PF03764 Elongation factor G, domain IV VSVS12_RS12460 PF14492 Elongation Factor G, domain II VSVS12_RS12460 PF00679 Elongation factor G C-terminus VSVS12_RS12465 PF18073 Rubredoxin metal binding domain VSVS12_RS12485 PF13333 Integrase core domain VSVS12_RS12485 PF00665 Integrase core domain VSVS12_RS12485 PF13276 HTH-like domain VSVS12_RS12490 PF01527 Transposase VSVS12_RS12495 PF01048 Phosphorylase superfamily VSVS12_RS12500 PF01676 Metalloenzyme superfamily VSVS12_RS12505 PF00591 Glycosyl transferase family, a/b domain VSVS12_RS12505 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VSVS12_RS12505 PF02885 Glycosyl transferase family, helical bundle domain VSVS12_RS12510 PF01791 DeoC/LacD family aldolase VSVS12_RS12515 PF01773 Na+ dependent nucleoside transporter N-terminus VSVS12_RS12515 PF07662 Na+ dependent nucleoside transporter C-terminus VSVS12_RS12515 PF07670 Nucleoside recognition VSVS12_RS12520 PF01026 TatD related DNase VSVS12_RS12525 PF03883 Peroxide stress protein YaaA VSVS12_RS12530 PF01235 Sodium:alanine symporter family VSVS12_RS12545 PF03167 Uracil DNA glycosylase superfamily VSVS12_RS12550 PF01261 Xylose isomerase-like TIM barrel VSVS12_RS12555 PF01228 Glycine radical VSVS12_RS12560 PF18416 N-acetylglucosamine binding protein domain 2 VSVS12_RS12560 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VSVS12_RS12565 PF03466 LysR substrate binding domain VSVS12_RS12565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS12580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VSVS12_RS12580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VSVS12_RS12580 PF02142 MGS-like domain VSVS12_RS12585 PF00117 Glutamine amidotransferase class-I VSVS12_RS12585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VSVS12_RS12590 PF01113 Dihydrodipicolinate reductase, N-terminus VSVS12_RS12590 PF05173 Dihydrodipicolinate reductase, C-terminus VSVS12_RS12595 PF00293 NUDIX domain VSVS12_RS12600 PF07516 SecA Wing and Scaffold domain VSVS12_RS12600 PF02810 SEC-C motif VSVS12_RS12600 PF01043 SecA preprotein cross-linking domain VSVS12_RS12600 PF07517 SecA DEAD-like domain VSVS12_RS12610 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VSVS12_RS12615 PF12327 FtsZ family, C-terminal domain VSVS12_RS12615 PF00091 Tubulin/FtsZ family, GTPase domain VSVS12_RS12620 PF02491 SHS2 domain inserted in FTSA VSVS12_RS12625 PF08478 POTRA domain, FtsQ-type VSVS12_RS12625 PF03799 Cell division protein FtsQ VSVS12_RS12630 PF02875 Mur ligase family, glutamate ligase domain VSVS12_RS12630 PF01225 Mur ligase family, catalytic domain VSVS12_RS12630 PF08245 Mur ligase middle domain VSVS12_RS12635 PF04101 Glycosyltransferase family 28 C-terminal domain VSVS12_RS12635 PF03033 Glycosyltransferase family 28 N-terminal domain VSVS12_RS12640 PF01098 Cell cycle protein VSVS12_RS12645 PF08245 Mur ligase middle domain VSVS12_RS12645 PF02875 Mur ligase family, glutamate ligase domain VSVS12_RS12650 PF00953 Glycosyl transferase family 4 VSVS12_RS12650 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VSVS12_RS12655 PF08245 Mur ligase middle domain VSVS12_RS12655 PF02875 Mur ligase family, glutamate ligase domain VSVS12_RS12655 PF01225 Mur ligase family, catalytic domain VSVS12_RS12660 PF02875 Mur ligase family, glutamate ligase domain VSVS12_RS12660 PF08245 Mur ligase middle domain VSVS12_RS12660 PF01225 Mur ligase family, catalytic domain VSVS12_RS12665 PF03717 Penicillin-binding Protein dimerisation domain VSVS12_RS12665 PF00905 Penicillin binding protein transpeptidase domain VSVS12_RS12670 PF04999 Cell division protein FtsL VSVS12_RS12675 PF01795 MraW methylase family VSVS12_RS12690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VSVS12_RS12695 PF04348 LppC putative lipoprotein VSVS12_RS12700 PF02021 Uncharacterised protein family UPF0102 VSVS12_RS12705 PF13580 SIS domain VSVS12_RS12710 PF04972 BON domain VSVS12_RS12715 PF04386 Stringent starvation protein B VSVS12_RS12720 PF02798 Glutathione S-transferase, N-terminal domain VSVS12_RS12720 PF00043 Glutathione S-transferase, C-terminal domain VSVS12_RS12725 PF02167 Cytochrome C1 family VSVS12_RS12730 PF00033 Cytochrome b/b6/petB VSVS12_RS12730 PF00032 Cytochrome b(C-terminal)/b6/petD VSVS12_RS12735 PF00355 Rieske [2Fe-2S] domain VSVS12_RS12735 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VSVS12_RS12740 PF00380 Ribosomal protein S9/S16 VSVS12_RS12745 PF00572 Ribosomal protein L13 VSVS12_RS12750 PF03969 AFG1-like ATPase VSVS12_RS12755 PF06295 Protein of unknown function (DUF1043) VSVS12_RS12760 PF00595 PDZ domain VSVS12_RS12765 PF13180 PDZ domain VSVS12_RS12770 PF03989 DNA gyrase C-terminal domain, beta-propeller VSVS12_RS12770 PF00521 DNA gyrase/topoisomerase IV, subunit A VSVS12_RS12775 PF00204 DNA gyrase B VSVS12_RS12775 PF00986 DNA gyrase B subunit, carboxyl terminus VSVS12_RS12775 PF01751 Toprim domain VSVS12_RS12775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS12780 PF05728 Uncharacterised protein family (UPF0227) VSVS12_RS12785 PF00149 Calcineurin-like phosphoesterase VSVS12_RS12790 PF06853 Protein of unknown function (DUF1249) VSVS12_RS12795 PF00293 NUDIX domain VSVS12_RS12800 PF02321 Outer membrane efflux protein VSVS12_RS12810 PF00158 Sigma-54 interaction domain VSVS12_RS12810 PF00072 Response regulator receiver domain VSVS12_RS12810 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS12815 PF01336 OB-fold nucleic acid binding domain VSVS12_RS12815 PF00152 tRNA synthetases class II (D, K and N) VSVS12_RS12820 PF00472 RF-1 domain VSVS12_RS12820 PF03462 PCRF domain VSVS12_RS12825 PF05525 Branched-chain amino acid transport protein VSVS12_RS12830 PF05175 Methyltransferase small domain VSVS12_RS12835 PF00270 DEAD/DEAH box helicase VSVS12_RS12835 PF00271 Helicase conserved C-terminal domain VSVS12_RS12840 PF03144 Elongation factor Tu domain 2 VSVS12_RS12840 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS12840 PF16658 Class II release factor RF3, C-terminal domain VSVS12_RS12845 PF00583 Acetyltransferase (GNAT) family VSVS12_RS12855 PF13508 Acetyltransferase (GNAT) domain VSVS12_RS12860 PF02036 SCP-2 sterol transfer family VSVS12_RS12865 PF03707 Bacterial signalling protein N terminal repeat VSVS12_RS12865 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS12865 PF00563 EAL domain VSVS12_RS12870 PF01136 Peptidase family U32 VSVS12_RS12875 PF01136 Peptidase family U32 VSVS12_RS12880 PF00149 Calcineurin-like phosphoesterase VSVS12_RS12880 PF02872 5'-nucleotidase, C-terminal domain VSVS12_RS12890 PF01554 MatE VSVS12_RS12900 PF07719 Tetratricopeptide repeat VSVS12_RS12900 PF13181 Tetratricopeptide repeat VSVS12_RS12905 PF01138 3' exoribonuclease family, domain 1 VSVS12_RS12905 PF03725 3' exoribonuclease family, domain 2 VSVS12_RS12905 PF00575 S1 RNA binding domain VSVS12_RS12905 PF00013 KH domain VSVS12_RS12905 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VSVS12_RS12910 PF00312 Ribosomal protein S15 VSVS12_RS12915 PF01048 Phosphorylase superfamily VSVS12_RS12925 PF01497 Periplasmic binding protein VSVS12_RS12930 PF03458 UPF0126 domain VSVS12_RS12935 PF14821 Threonine synthase N terminus VSVS12_RS12935 PF00291 Pyridoxal-phosphate dependent enzyme VSVS12_RS12940 PF08544 GHMP kinases C terminal VSVS12_RS12940 PF00288 GHMP kinases N terminal domain VSVS12_RS12945 PF03447 Homoserine dehydrogenase, NAD binding domain VSVS12_RS12945 PF00696 Amino acid kinase family VSVS12_RS12945 PF01842 ACT domain VSVS12_RS12945 PF13840 ACT domain VSVS12_RS12945 PF00742 Homoserine dehydrogenase VSVS12_RS12955 PF03737 Aldolase/RraA VSVS12_RS12965 PF00072 Response regulator receiver domain VSVS12_RS12965 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS12970 PF01467 Cytidylyltransferase-like VSVS12_RS12970 PF00294 pfkB family carbohydrate kinase VSVS12_RS12975 PF03710 Glutamate-ammonia ligase adenylyltransferase VSVS12_RS12975 PF08335 GlnD PII-uridylyltransferase VSVS12_RS12980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS12980 PF02743 Cache domain VSVS12_RS12980 PF00672 HAMP domain VSVS12_RS12985 PF00027 Cyclic nucleotide-binding domain VSVS12_RS12985 PF00520 Ion transport protein VSVS12_RS12990 PF01928 CYTH domain VSVS12_RS12995 PF01865 Protein of unknown function DUF47 VSVS12_RS13000 PF01384 Phosphate transporter family VSVS12_RS13005 PF08239 Bacterial SH3 domain VSVS12_RS13015 PF01471 Putative peptidoglycan binding domain VSVS12_RS13015 PF13401 AAA domain VSVS12_RS13020 PF01743 Poly A polymerase head domain VSVS12_RS13020 PF12627 Probable RNA and SrmB- binding site of polymerase A VSVS12_RS13020 PF01966 HD domain VSVS12_RS13025 PF00113 Enolase, C-terminal TIM barrel domain VSVS12_RS13025 PF03952 Enolase, N-terminal domain VSVS12_RS13030 PF00117 Glutamine amidotransferase class-I VSVS12_RS13030 PF06418 CTP synthase N-terminus VSVS12_RS13035 PF03819 MazG nucleotide pyrophosphohydrolase domain VSVS12_RS13040 PF02824 TGS domain VSVS12_RS13040 PF04607 Region found in RelA / SpoT proteins VSVS12_RS13040 PF13291 ACT domain VSVS12_RS13045 PF05958 tRNA (Uracil-5-)-methyltransferase VSVS12_RS13045 PF01938 TRAM domain VSVS12_RS13050 PF01627 Hpt domain VSVS12_RS13050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS13050 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS13050 PF00072 Response regulator receiver domain VSVS12_RS13050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VSVS12_RS13050 PF00672 HAMP domain VSVS12_RS13055 PF01648 4'-phosphopantetheinyl transferase superfamily VSVS12_RS13060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VSVS12_RS13065 PF02565 Recombination protein O C terminal VSVS12_RS13065 PF11967 Recombination protein O N terminal VSVS12_RS13070 PF01926 50S ribosome-binding GTPase VSVS12_RS13070 PF07650 KH domain VSVS12_RS13075 PF00035 Double-stranded RNA binding motif VSVS12_RS13075 PF14622 Ribonuclease-III-like VSVS12_RS13080 PF10502 Signal peptidase, peptidase S26 VSVS12_RS13085 PF03144 Elongation factor Tu domain 2 VSVS12_RS13085 PF00679 Elongation factor G C-terminus VSVS12_RS13085 PF06421 GTP-binding protein LepA C-terminus VSVS12_RS13085 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS13095 PF03888 MucB/RseB N-terminal domain VSVS12_RS13095 PF17188 MucB/RseB C-terminal domain VSVS12_RS13100 PF03873 Anti sigma-E protein RseA, C-terminal domain VSVS12_RS13100 PF03872 Anti sigma-E protein RseA, N-terminal domain VSVS12_RS13105 PF08281 Sigma-70, region 4 VSVS12_RS13105 PF04542 Sigma-70 region 2 VSVS12_RS13110 PF00890 FAD binding domain VSVS12_RS13110 PF02910 Fumarate reductase flavoprotein C-term VSVS12_RS13120 PF03937 Flavinator of succinate dehydrogenase VSVS12_RS13140 PF01494 FAD binding domain VSVS12_RS13145 PF01494 FAD binding domain VSVS12_RS13150 PF03695 Uncharacterised protein family (UPF0149) VSVS12_RS13165 PF01812 5-formyltetrahydrofolate cyclo-ligase family VSVS12_RS13170 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VSVS12_RS13175 PF01842 ACT domain VSVS12_RS13175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VSVS12_RS13175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VSVS12_RS13180 PF10369 Small subunit of acetolactate synthase VSVS12_RS13185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VSVS12_RS13185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VSVS12_RS13185 PF00205 Thiamine pyrophosphate enzyme, central domain VSVS12_RS13190 PF00501 AMP-binding enzyme VSVS12_RS13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS13195 PF03466 LysR substrate binding domain VSVS12_RS13200 PF08502 LeuA allosteric (dimerisation) domain VSVS12_RS13200 PF00682 HMGL-like VSVS12_RS13205 PF00180 Isocitrate/isopropylmalate dehydrogenase VSVS12_RS13210 PF00330 Aconitase family (aconitate hydratase) VSVS12_RS13215 PF00694 Aconitase C-terminal domain VSVS12_RS13270 PF00356 Bacterial regulatory proteins, lacI family VSVS12_RS13275 PF04794 YdjC-like protein VSVS12_RS13280 PF11975 Family 4 glycosyl hydrolase C-terminal domain VSVS12_RS13280 PF02056 Family 4 glycosyl hydrolase VSVS12_RS13285 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VSVS12_RS13290 PF02378 Phosphotransferase system, EIIC VSVS12_RS13295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VSVS12_RS13300 PF12729 Four helix bundle sensory module for signal transduction VSVS12_RS13300 PF00672 HAMP domain VSVS12_RS13300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS13315 PF00719 Inorganic pyrophosphatase VSVS12_RS13375 PF05746 DALR anticodon binding domain VSVS12_RS13375 PF00750 tRNA synthetases class I (R) VSVS12_RS13375 PF03485 Arginyl tRNA synthetase N terminal domain VSVS12_RS13385 PF13280 WYL domain VSVS12_RS13385 PF08220 DeoR-like helix-turn-helix domain VSVS12_RS13500 PF02664 S-Ribosylhomocysteinase (LuxS) VSVS12_RS13510 PF04262 Glutamate-cysteine ligase VSVS12_RS13515 PF00675 Insulinase (Peptidase family M16) VSVS12_RS13515 PF05193 Peptidase M16 inactive domain VSVS12_RS13520 PF09335 SNARE associated Golgi protein VSVS12_RS13525 PF08240 Alcohol dehydrogenase GroES-like domain VSVS12_RS13525 PF00107 Zinc-binding dehydrogenase VSVS12_RS13530 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VSVS12_RS13535 PF00364 Biotin-requiring enzyme VSVS12_RS13535 PF02436 Conserved carboxylase domain VSVS12_RS13535 PF00682 HMGL-like VSVS12_RS13540 PF04277 Oxaloacetate decarboxylase, gamma chain VSVS12_RS13585 PF02599 Global regulator protein family VSVS12_RS13590 PF00696 Amino acid kinase family VSVS12_RS13590 PF01842 ACT domain VSVS12_RS13590 PF13840 ACT domain VSVS12_RS13595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VSVS12_RS13595 PF01411 tRNA synthetases class II (A) VSVS12_RS13595 PF02272 DHHA1 domain VSVS12_RS13600 PF00154 recA bacterial DNA recombination protein VSVS12_RS13605 PF02464 Competence-damaged protein VSVS12_RS13610 PF01624 MutS domain I VSVS12_RS13610 PF05188 MutS domain II VSVS12_RS13610 PF00488 MutS domain V VSVS12_RS13610 PF05192 MutS domain III VSVS12_RS13610 PF05190 MutS family domain IV VSVS12_RS13620 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VSVS12_RS13620 PF00437 Type II/IV secretion system protein VSVS12_RS13625 PF00482 Type II secretion system (T2SS), protein F VSVS12_RS13635 PF01121 Dephospho-CoA kinase VSVS12_RS13640 PF07072 Cell division protein VSVS12_RS13645 PF03884 DNA gyrase inhibitor YacG VSVS12_RS13650 PF01245 Ribosomal protein L19 VSVS12_RS13655 PF01746 tRNA (Guanine-1)-methyltransferase VSVS12_RS13660 PF05239 PRC-barrel domain VSVS12_RS13660 PF01782 RimM N-terminal domain VSVS12_RS13665 PF00886 Ribosomal protein S16 VSVS12_RS13670 PF02978 Signal peptide binding domain VSVS12_RS13670 PF02881 SRP54-type protein, helical bundle domain VSVS12_RS13670 PF00448 SRP54-type protein, GTPase domain VSVS12_RS13675 PF01578 Cytochrome C assembly protein VSVS12_RS13680 PF00571 CBS domain VSVS12_RS13680 PF03471 Transporter associated domain VSVS12_RS13680 PF01595 Cyclin M transmembrane N-terminal domain VSVS12_RS13685 PF00140 Sigma-70 factor, region 1.2 VSVS12_RS13685 PF04539 Sigma-70 region 3 VSVS12_RS13685 PF04545 Sigma-70, region 4 VSVS12_RS13685 PF04542 Sigma-70 region 2 VSVS12_RS13690 PF01476 LysM domain VSVS12_RS13690 PF01551 Peptidase family M23 VSVS12_RS13700 PF01975 Survival protein SurE VSVS12_RS13705 PF01142 tRNA pseudouridine synthase D (TruD) VSVS12_RS13710 PF02542 YgbB family VSVS12_RS13715 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VSVS12_RS13720 PF04977 Septum formation initiator VSVS12_RS13725 PF02673 Bacitracin resistance protein BacA VSVS12_RS13730 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VSVS12_RS13735 PF02152 Dihydroneopterin aldolase VSVS12_RS13740 PF02660 Glycerol-3-phosphate acyltransferase VSVS12_RS13745 PF00561 alpha/beta hydrolase fold VSVS12_RS13750 PF00814 Glycoprotease family VSVS12_RS13755 PF01165 Ribosomal protein S21 VSVS12_RS13760 PF09424 Yqey-like protein VSVS12_RS13765 PF01807 CHC2 zinc finger VSVS12_RS13765 PF08275 DNA primase catalytic core, N-terminal domain VSVS12_RS13765 PF10410 DnaB-helicase binding domain of primase VSVS12_RS13765 PF08278 DNA primase DnaG DnaB-binding VSVS12_RS13770 PF04545 Sigma-70, region 4 VSVS12_RS13770 PF04539 Sigma-70 region 3 VSVS12_RS13770 PF04542 Sigma-70 region 2 VSVS12_RS13770 PF00140 Sigma-70 factor, region 1.2 VSVS12_RS13770 PF03979 Sigma-70 factor, region 1.1 VSVS12_RS13770 PF04546 Sigma-70, non-essential region VSVS12_RS13780 PF00589 Phage integrase family VSVS12_RS13780 PF13356 Arm DNA-binding domain VSVS12_RS13785 PF13276 HTH-like domain VSVS12_RS13785 PF00665 Integrase core domain VSVS12_RS13785 PF13333 Integrase core domain VSVS12_RS13790 PF01527 Transposase VSVS12_RS13795 PF02743 Cache domain VSVS12_RS13795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VSVS12_RS13795 PF00672 HAMP domain VSVS12_RS13845 PF04002 RadC-like JAB domain VSVS12_RS13895 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS13895 PF08448 PAS fold VSVS12_RS13900 PF00860 Permease family VSVS12_RS13915 PF03480 Bacterial extracellular solute-binding protein, family 7 VSVS12_RS13925 PF08240 Alcohol dehydrogenase GroES-like domain VSVS12_RS13925 PF00107 Zinc-binding dehydrogenase VSVS12_RS13935 PF00765 Autoinducer synthase VSVS12_RS13945 PF00196 Bacterial regulatory proteins, luxR family VSVS12_RS13945 PF03472 Autoinducer binding domain VSVS12_RS13950 PF01380 SIS domain VSVS12_RS13955 PF08220 DeoR-like helix-turn-helix domain VSVS12_RS13955 PF00455 DeoR C terminal sensor domain VSVS12_RS13960 PF00224 Pyruvate kinase, barrel domain VSVS12_RS13960 PF02887 Pyruvate kinase, alpha/beta domain VSVS12_RS13965 PF04402 Protein of unknown function (DUF541) VSVS12_RS13970 PF03466 LysR substrate binding domain VSVS12_RS13970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VSVS12_RS13975 PF01810 LysE type translocator VSVS12_RS13980 PF00924 Mechanosensitive ion channel VSVS12_RS13980 PF05552 Conserved TM helix VSVS12_RS13985 PF01116 Fructose-bisphosphate aldolase class-II VSVS12_RS13990 PF00162 Phosphoglycerate kinase VSVS12_RS13995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSVS12_RS13995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VSVS12_RS14005 PF00456 Transketolase, thiamine diphosphate binding domain VSVS12_RS14005 PF02779 Transketolase, pyrimidine binding domain VSVS12_RS14005 PF02780 Transketolase, C-terminal domain VSVS12_RS14010 PF00438 S-adenosylmethionine synthetase, N-terminal domain VSVS12_RS14010 PF02772 S-adenosylmethionine synthetase, central domain VSVS12_RS14010 PF02773 S-adenosylmethionine synthetase, C-terminal domain VSVS12_RS14020 PF10263 SprT-like family VSVS12_RS14020 PF17283 SprT-like zinc ribbon domain VSVS12_RS14025 PF04231 Endonuclease I VSVS12_RS14030 PF04452 RNA methyltransferase VSVS12_RS14035 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VSVS12_RS14035 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VSVS12_RS14040 PF02622 Uncharacterized ACR, COG1678 VSVS12_RS14045 PF03652 Holliday junction resolvase VSVS12_RS14050 PF01523 Putative modulator of DNA gyrase VSVS12_RS14055 PF04751 Protein of unknown function (DUF615) VSVS12_RS14060 PF00005 ABC transporter VSVS12_RS14065 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS14075 PF02441 Flavoprotein VSVS12_RS14080 PF01225 Mur ligase family, catalytic domain VSVS12_RS14080 PF02875 Mur ligase family, glutamate ligase domain VSVS12_RS14080 PF08245 Mur ligase middle domain VSVS12_RS14085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VSVS12_RS14090 PF00719 Inorganic pyrophosphatase VSVS12_RS14100 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VSVS12_RS14105 PF04357 TamB, inner membrane protein subunit of TAM complex VSVS12_RS14110 PF07244 Surface antigen variable number repeat VSVS12_RS14110 PF01103 Surface antigen VSVS12_RS14110 PF17243 POTRA domain TamA domain 1 VSVS12_RS14115 PF01625 Peptide methionine sulfoxide reductase VSVS12_RS14120 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VSVS12_RS14135 PF00005 ABC transporter VSVS12_RS14165 PF00342 Phosphoglucose isomerase VSVS12_RS14170 PF01894 Uncharacterised protein family UPF0047 VSVS12_RS14175 PF01168 Alanine racemase, N-terminal domain VSVS12_RS14175 PF00842 Alanine racemase, C-terminal domain VSVS12_RS14180 PF03796 DnaB-like helicase C terminal domain VSVS12_RS14180 PF00772 DnaB-like helicase N terminal domain VSVS12_RS14190 PF03948 Ribosomal protein L9, C-terminal domain VSVS12_RS14190 PF01281 Ribosomal protein L9, N-terminal domain VSVS12_RS14195 PF01084 Ribosomal protein S18 VSVS12_RS14200 PF00436 Single-strand binding protein family VSVS12_RS14205 PF01250 Ribosomal protein S6 VSVS12_RS14210 PF00210 Ferritin-like domain VSVS12_RS14215 PF04324 BFD-like [2Fe-2S] binding domain VSVS12_RS14220 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS14220 PF03144 Elongation factor Tu domain 2 VSVS12_RS14220 PF03143 Elongation factor Tu C-terminal domain VSVS12_RS14225 PF03144 Elongation factor Tu domain 2 VSVS12_RS14225 PF00679 Elongation factor G C-terminus VSVS12_RS14225 PF14492 Elongation Factor G, domain II VSVS12_RS14225 PF03764 Elongation factor G, domain IV VSVS12_RS14225 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS14230 PF00177 Ribosomal protein S7p/S5e VSVS12_RS14235 PF00164 Ribosomal protein S12/S23 VSVS12_RS14245 PF02635 DsrE/DsrF-like family VSVS12_RS14250 PF02635 DsrE/DsrF-like family VSVS12_RS14255 PF08348 YheO-like PAS domain VSVS12_RS14255 PF13309 HTH domain VSVS12_RS14260 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VSVS12_RS14260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VSVS12_RS14270 PF04102 SlyX VSVS12_RS14275 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VSVS12_RS14280 PF01145 SPFH domain / Band 7 family VSVS12_RS14285 PF01145 SPFH domain / Band 7 family VSVS12_RS14285 PF12221 Bacterial membrane protein N terminal VSVS12_RS14290 PF16360 GTP-binding GTPase Middle Region VSVS12_RS14290 PF13167 GTP-binding GTPase N-terminal VSVS12_RS14290 PF01926 50S ribosome-binding GTPase VSVS12_RS14295 PF17209 Hfq protein VSVS12_RS14305 PF01119 DNA mismatch repair protein, C-terminal domain VSVS12_RS14305 PF08676 MutL C terminal dimerisation domain VSVS12_RS14310 PF01520 N-acetylmuramoyl-L-alanine amidase VSVS12_RS14315 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VSVS12_RS14320 PF08331 Domain of unknown function (DUF1730) VSVS12_RS14385 PF00929 Exonuclease VSVS12_RS14390 PF03193 RsgA GTPase VSVS12_RS14395 PF02666 Phosphatidylserine decarboxylase VSVS12_RS14400 PF02080 TrkA-C domain VSVS12_RS14400 PF03600 Citrate transporter VSVS12_RS14410 PF01676 Metalloenzyme superfamily VSVS12_RS14410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VSVS12_RS14415 PF01551 Peptidase family M23 VSVS12_RS14425 PF08360 QacR-like protein, C-terminal region VSVS12_RS14425 PF00440 Bacterial regulatory proteins, tetR family VSVS12_RS14430 PF01208 Uroporphyrinogen decarboxylase (URO-D) VSVS12_RS14435 PF00293 NUDIX domain VSVS12_RS14435 PF09297 NADH pyrophosphatase zinc ribbon domain VSVS12_RS14440 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VSVS12_RS14445 PF04983 RNA polymerase Rpb1, domain 3 VSVS12_RS14445 PF04998 RNA polymerase Rpb1, domain 5 VSVS12_RS14445 PF00623 RNA polymerase Rpb1, domain 2 VSVS12_RS14445 PF04997 RNA polymerase Rpb1, domain 1 VSVS12_RS14445 PF05000 RNA polymerase Rpb1, domain 4 VSVS12_RS14450 PF04561 RNA polymerase Rpb2, domain 2 VSVS12_RS14450 PF04563 RNA polymerase beta subunit VSVS12_RS14450 PF04565 RNA polymerase Rpb2, domain 3 VSVS12_RS14450 PF10385 RNA polymerase beta subunit external 1 domain VSVS12_RS14450 PF00562 RNA polymerase Rpb2, domain 6 VSVS12_RS14450 PF04560 RNA polymerase Rpb2, domain 7 VSVS12_RS14455 PF00542 Ribosomal protein L7/L12 C-terminal domain VSVS12_RS14455 PF16320 Ribosomal protein L7/L12 dimerisation domain VSVS12_RS14460 PF00466 Ribosomal protein L10 VSVS12_RS14465 PF00687 Ribosomal protein L1p/L10e family VSVS12_RS14470 PF00298 Ribosomal protein L11, RNA binding domain VSVS12_RS14470 PF03946 Ribosomal protein L11, N-terminal domain VSVS12_RS14475 PF02357 Transcription termination factor nusG VSVS12_RS14475 PF00467 KOW motif VSVS12_RS14480 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VSVS12_RS14485 PF00009 Elongation factor Tu GTP binding domain VSVS12_RS14485 PF03143 Elongation factor Tu C-terminal domain VSVS12_RS14485 PF03144 Elongation factor Tu domain 2 VSVS12_RS14515 PF00485 Phosphoribulokinase / Uridine kinase family VSVS12_RS14530 PF00121 Triosephosphate isomerase VSVS12_RS14535 PF01554 MatE VSVS12_RS14540 PF03737 Aldolase/RraA VSVS12_RS14545 PF01040 UbiA prenyltransferase family VSVS12_RS14550 PF01132 Elongation factor P (EF-P) OB domain VSVS12_RS14550 PF08207 Elongation factor P (EF-P) KOW-like domain VSVS12_RS14550 PF09285 Elongation factor P, C-terminal VSVS12_RS14555 PF04055 Radical SAM superfamily VSVS12_RS14565 PF02308 MgtC family VSVS12_RS14570 PF00365 Phosphofructokinase VSVS12_RS14575 PF01545 Cation efflux family VSVS12_RS14575 PF16916 Dimerisation domain of Zinc Transporter VSVS12_RS14580 PF07813 LTXXQ motif family protein VSVS12_RS14585 PF00486 Transcriptional regulatory protein, C terminal VSVS12_RS14585 PF00072 Response regulator receiver domain VSVS12_RS14590 PF16527 Two-component sensor protein CpxA, periplasmic domain VSVS12_RS14590 PF00672 HAMP domain VSVS12_RS14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS14590 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS14595 PF00588 SpoU rRNA Methylase family VSVS12_RS14600 PF04186 FxsA cytoplasmic membrane protein VSVS12_RS14605 PF10415 Fumarase C C-terminus VSVS12_RS14605 PF00206 Lyase VSVS12_RS14610 PF03605 Anaerobic c4-dicarboxylate membrane transporter VSVS12_RS14615 PF11412 Disulphide bond corrector protein DsbC VSVS12_RS14615 PF02683 Cytochrome C biogenesis protein transmembrane region VSVS12_RS14620 PF00196 Bacterial regulatory proteins, luxR family VSVS12_RS14620 PF00072 Response regulator receiver domain VSVS12_RS14625 PF01914 MarC family integral membrane protein VSVS12_RS14635 PF00474 Sodium:solute symporter family VSVS12_RS14645 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS14645 PF00072 Response regulator receiver domain VSVS12_RS14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS14645 PF09308 LuxQ, periplasmic VSVS12_RS14650 PF12832 MFS_1 like family VSVS12_RS14665 PF13193 AMP-binding enzyme C-terminal domain VSVS12_RS14665 PF00501 AMP-binding enzyme VSVS12_RS14665 PF16177 Acetyl-coenzyme A synthetase N-terminus VSVS12_RS14670 PF01220 Dehydroquinase class II VSVS12_RS14675 PF00364 Biotin-requiring enzyme VSVS12_RS14680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VSVS12_RS14680 PF02785 Biotin carboxylase C-terminal domain VSVS12_RS14680 PF00289 Biotin carboxylase, N-terminal domain VSVS12_RS14690 PF01207 Dihydrouridine synthase (Dus) VSVS12_RS14695 PF02954 Bacterial regulatory protein, Fis family VSVS12_RS14700 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS14705 PF13411 MerR HTH family regulatory protein VSVS12_RS14710 PF01808 AICARFT/IMPCHase bienzyme VSVS12_RS14710 PF02142 MGS-like domain VSVS12_RS14715 PF02844 Phosphoribosylglycinamide synthetase, N domain VSVS12_RS14715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VSVS12_RS14715 PF02843 Phosphoribosylglycinamide synthetase, C domain VSVS12_RS14725 PF00216 Bacterial DNA-binding protein VSVS12_RS14730 PF00571 CBS domain VSVS12_RS14730 PF01595 Cyclin M transmembrane N-terminal domain VSVS12_RS14735 PF04222 Protein of unknown function (DUF416) VSVS12_RS14740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VSVS12_RS14830 PF01177 Asp/Glu/Hydantoin racemase VSVS12_RS14840 PF00593 TonB dependent receptor VSVS12_RS14840 PF07715 TonB-dependent Receptor Plug Domain VSVS12_RS14845 PF05958 tRNA (Uracil-5-)-methyltransferase VSVS12_RS14855 PF00440 Bacterial regulatory proteins, tetR family VSVS12_RS14890 PF01040 UbiA prenyltransferase family VSVS12_RS15240 PF01042 Endoribonuclease L-PSP VSVS12_RS15260 PF03793 PASTA domain VSVS12_RS15260 PF00069 Protein kinase domain VSVS12_RS15310 PF00528 Binding-protein-dependent transport system inner membrane component VSVS12_RS15310 PF12911 N-terminal TM domain of oligopeptide transport permease C VSVS12_RS15495 PF00920 Dehydratase family VSVS12_RS15720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VSVS12_RS15720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VSVS12_RS15720 PF00378 Enoyl-CoA hydratase/isomerase VSVS12_RS15735 PF07690 Major Facilitator Superfamily VSVS12_RS15955 PF00107 Zinc-binding dehydrogenase VSVS12_RS15955 PF08240 Alcohol dehydrogenase GroES-like domain VSVS12_RS15965 PF00291 Pyridoxal-phosphate dependent enzyme VSVS12_RS15965 PF00585 C-terminal regulatory domain of Threonine dehydratase VSVS12_RS15970 PF00291 Pyridoxal-phosphate dependent enzyme VSVS12_RS15970 PF00585 C-terminal regulatory domain of Threonine dehydratase VSVS12_RS16360 PF03631 Virulence factor BrkB VSVS12_RS16395 PF01430 Hsp33 protein VSVS12_RS16480 PF16921 Tex protein YqgF-like domain VSVS12_RS16480 PF17674 HHH domain VSVS12_RS16480 PF09371 Tex-like protein N-terminal domain VSVS12_RS16480 PF00575 S1 RNA binding domain VSVS12_RS16485 PF16921 Tex protein YqgF-like domain VSVS12_RS16485 PF00575 S1 RNA binding domain VSVS12_RS16485 PF09371 Tex-like protein N-terminal domain VSVS12_RS16485 PF17674 HHH domain VSVS12_RS16525 PF17191 RecG wedge domain VSVS12_RS16525 PF00271 Helicase conserved C-terminal domain VSVS12_RS16525 PF00270 DEAD/DEAH box helicase VSVS12_RS16770 PF00742 Homoserine dehydrogenase VSVS12_RS16770 PF00696 Amino acid kinase family VSVS12_RS16770 PF03447 Homoserine dehydrogenase, NAD binding domain VSVS12_RS16865 PF00977 Histidine biosynthesis protein VSVS12_RS16960 PF06082 Exopolysaccharide biosynthesis protein YbjH VSVS12_RS17040 PF00311 Phosphoenolpyruvate carboxylase VSVS12_RS17155 PF13419 Haloacid dehalogenase-like hydrolase VSVS12_RS17240 PF00999 Sodium/hydrogen exchanger family VSVS12_RS17240 PF02254 TrkA-N domain VSVS12_RS17415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VSVS12_RS17415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VSVS12_RS17630 PF00437 Type II/IV secretion system protein VSVS12_RS18160 PF13556 PucR C-terminal helix-turn-helix domain VSVS12_RS18160 PF17853 GGDEF-like domain VSVS12_RS18160 PF05651 Putative sugar diacid recognition VSVS12_RS18210 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VSVS12_RS18210 PF06165 Glycosyltransferase family 36 VSVS12_RS18365 PF01493 GXGXG motif VSVS12_RS18365 PF01645 Conserved region in glutamate synthase VSVS12_RS18365 PF04898 Glutamate synthase central domain VSVS12_RS18365 PF00310 Glutamine amidotransferases class-II VSVS12_RS18400 PF00512 His Kinase A (phospho-acceptor) domain VSVS12_RS18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS18400 PF18415 Histidine kinase receptor ArcB trans-membrane domain VSVS12_RS18400 PF01627 Hpt domain VSVS12_RS18400 PF00989 PAS fold VSVS12_RS18400 PF00072 Response regulator receiver domain VSVS12_RS18490 PF00933 Glycosyl hydrolase family 3 N terminal domain VSVS12_RS18550 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS18550 PF00563 EAL domain VSVS12_RS19135 PF00464 Serine hydroxymethyltransferase VSVS12_RS19175 PF01098 Cell cycle protein VSVS12_RS19190 PF04390 Lipopolysaccharide-assembly VSVS12_RS19205 PF08264 Anticodon-binding domain of tRNA VSVS12_RS19205 PF00133 tRNA synthetases class I (I, L, M and V) VSVS12_RS19205 PF13603 Leucyl-tRNA synthetase, Domain 2 VSVS12_RS19335 PF12850 Calcineurin-like phosphoesterase superfamily domain VSVS12_RS19350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VSVS12_RS19350 PF00183 Hsp90 protein VSVS12_RS19520 PF00860 Permease family VSVS12_RS19695 PF03553 Na+/H+ antiporter family VSVS12_RS19695 PF13726 Na+-H+ antiporter family VSVS12_RS19885 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS19885 PF17151 Periplasmic sensor domain VSVS12_RS19935 PF00456 Transketolase, thiamine diphosphate binding domain VSVS12_RS19935 PF02779 Transketolase, pyrimidine binding domain VSVS12_RS19950 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) VSVS12_RS19975 PF13309 HTH domain VSVS12_RS19975 PF08348 YheO-like PAS domain VSVS12_RS20085 PF03775 Septum formation inhibitor MinC, C-terminal domain VSVS12_RS20085 PF05209 Septum formation inhibitor MinC, N-terminal domain VSVS12_RS20170 PF00155 Aminotransferase class I and II VSVS12_RS20695 PF03613 PTS system mannose/fructose/sorbose family IID component VSVS12_RS20720 PF08013 Tagatose 6 phosphate kinase VSVS12_RS20750 PF13286 Phosphohydrolase-associated domain VSVS12_RS20750 PF01966 HD domain VSVS12_RS20805 PF00367 phosphotransferase system, EIIB VSVS12_RS20805 PF02378 Phosphotransferase system, EIIC VSVS12_RS20805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VSVS12_RS20920 PF03707 Bacterial signalling protein N terminal repeat VSVS12_RS20920 PF00563 EAL domain VSVS12_RS20920 PF00990 Diguanylate cyclase, GGDEF domain VSVS12_RS20955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VSVS12_RS21080 PF01568 Molydopterin dinucleotide binding domain VSVS12_RS21080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VSVS12_RS21080 PF00384 Molybdopterin oxidoreductase VSVS12_RS21105 PF07085 DRTGG domain VSVS12_RS21105 PF01515 Phosphate acetyl/butaryl transferase VSVS12_RS21545 PF12146 Serine aminopeptidase, S33 VSVS12_RS21625 PF07219 HemY protein N-terminus VSVS12_RS21755 PF07498 Rho termination factor, N-terminal domain VSVS12_RS21755 PF07497 Rho termination factor, RNA-binding domain VSVS12_RS21755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VSVS12_RS21900 PF01053 Cys/Met metabolism PLP-dependent enzyme VSVS12_RS22090 PF06969 HemN C-terminal domain VSVS12_RS22090 PF04055 Radical SAM superfamily VSVS12_RS22385 PF01553 Acyltransferase VSVS12_RS22425 PF00140 Sigma-70 factor, region 1.2 VSVS12_RS22425 PF04545 Sigma-70, region 4 VSVS12_RS22425 PF04542 Sigma-70 region 2