CEQ48_RS00055 SM00881 CoA binding domain CEQ48_RS00130 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS00180 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ48_RS00180 SM00866 CEQ48_RS00180 CEQ48_RS00190 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS00270 SM00450 Rhodanese Homology Domain CEQ48_RS00275 SM00636 CEQ48_RS00275 CEQ48_RS00295 SM00861 Transketolase, pyrimidine binding domain CEQ48_RS00385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ48_RS00395 SM00450 Rhodanese Homology Domain CEQ48_RS00770 SM00360 RNA recognition motif CEQ48_RS00790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS00835 SM01266 CEQ48_RS00835 CEQ48_RS00980 SM01022 CEQ48_RS00980 CEQ48_RS00990 SM00360 RNA recognition motif CEQ48_RS01125 SM00990 CEQ48_RS01125 CEQ48_RS01310 SM00326 Src homology 3 domains CEQ48_RS01380 SM00255 Toll - interleukin 1 - resistance CEQ48_RS01430 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEQ48_RS01440 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS01465 SM01057 Eukaryotic-type carbonic anhydrase CEQ48_RS01480 SM00936 Penicillin-binding protein 5, C-terminal domain CEQ48_RS01490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS01490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS01495 SM00346 helix_turn_helix isocitrate lyase regulation CEQ48_RS01500 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS01540 SM00267 diguanylate cyclase CEQ48_RS01605 SM00924 MgtE intracellular N domain CEQ48_RS01610 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS01670 SM01266 CEQ48_RS01670 CEQ48_RS01675 SM01091 Transporter associated domain CEQ48_RS01695 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ48_RS01715 SM00267 diguanylate cyclase CEQ48_RS01730 SM00448 cheY-homologous receiver domain CEQ48_RS01730 SM00850 LytTr DNA-binding domain CEQ48_RS01735 SM00387 Histidine kinase-like ATPases CEQ48_RS01755 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS01770 SM00642 Alpha-amylase domain CEQ48_RS01810 SM00448 cheY-homologous receiver domain CEQ48_RS01830 SM00357 Cold shock protein domain CEQ48_RS01840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CEQ48_RS01840 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS01870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS01870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS01890 SM00327 von Willebrand factor (vWF) type A domain CEQ48_RS01895 SM00028 Tetratricopeptide repeats CEQ48_RS01915 SM00357 Cold shock protein domain CEQ48_RS01920 SM00267 diguanylate cyclase CEQ48_RS01990 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS01990 SM00448 cheY-homologous receiver domain CEQ48_RS01995 SM00091 PAS domain CEQ48_RS01995 SM00387 Histidine kinase-like ATPases CEQ48_RS01995 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS02000 SM00495 Chitin-binding domain type 3 CEQ48_RS02020 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS02040 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS02090 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS02095 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS02095 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ48_RS02170 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS02175 SM00450 Rhodanese Homology Domain CEQ48_RS02275 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS02275 SM01009 AlkA N-terminal domain CEQ48_RS02310 SM00671 Sel1-like repeats. CEQ48_RS02325 SM00642 Alpha-amylase domain CEQ48_RS02335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS02335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS02365 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS02390 SM00487 DEAD-like helicases superfamily CEQ48_RS02390 SM00490 helicase superfamily c-terminal domain CEQ48_RS02400 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS02425 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS02480 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS02480 SM00267 diguanylate cyclase CEQ48_RS02515 SM00267 diguanylate cyclase CEQ48_RS02520 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS02540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS02540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS02570 SM00487 DEAD-like helicases superfamily CEQ48_RS02570 SM00490 helicase superfamily c-terminal domain CEQ48_RS02580 SM00257 Lysin motif CEQ48_RS02590 SM00422 helix_turn_helix, mercury resistance CEQ48_RS02610 SM00028 Tetratricopeptide repeats CEQ48_RS02615 SM00267 diguanylate cyclase CEQ48_RS02620 SM00245 tail specific protease CEQ48_RS02670 SM00014 Acid phosphatase homologues CEQ48_RS02690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS02690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS02705 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CEQ48_RS02705 SM00495 Chitin-binding domain type 3 CEQ48_RS02705 SM00636 CEQ48_RS02705 CEQ48_RS02780 SM00642 Alpha-amylase domain CEQ48_RS02795 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS02805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS02805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS02805 SM01049 CEQ48_RS02805 CEQ48_RS02830 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS02835 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS02860 SM00470 ParB-like nuclease domain CEQ48_RS02885 SM01236 CEQ48_RS02885 CEQ48_RS02890 SM00822 CEQ48_RS02890 CEQ48_RS02900 SM00448 cheY-homologous receiver domain CEQ48_RS02900 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS02905 SM00387 Histidine kinase-like ATPases CEQ48_RS02905 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS02915 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS02940 SM00448 cheY-homologous receiver domain CEQ48_RS02945 SM00073 Histidine Phosphotransfer domain CEQ48_RS02945 SM00260 Two component signalling adaptor domain CEQ48_RS02945 SM00387 Histidine kinase-like ATPases CEQ48_RS02945 SM01231 CEQ48_RS02945 CEQ48_RS02950 SM00260 Two component signalling adaptor domain CEQ48_RS02955 SM00260 Two component signalling adaptor domain CEQ48_RS02960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS02960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS02965 SM00138 Methyltransferase, chemotaxis proteins CEQ48_RS02975 SM00448 cheY-homologous receiver domain CEQ48_RS02980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS02990 SM00331 Sigma factor PP2C-like phosphatases CEQ48_RS02990 SM00448 cheY-homologous receiver domain CEQ48_RS03005 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS03030 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ48_RS03030 SM01134 CEQ48_RS03030 CEQ48_RS03045 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS03050 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS03050 SM00267 diguanylate cyclase CEQ48_RS03070 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS03085 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS03110 SM00344 helix_turn_helix ASNC type CEQ48_RS03150 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS03200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS03200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS03220 SM00829 Enoylreductase CEQ48_RS03295 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS03305 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS03320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS03345 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS03360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS03360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS03395 SM00267 diguanylate cyclase CEQ48_RS03420 SM00267 diguanylate cyclase CEQ48_RS03420 SM01079 CEQ48_RS03420 CEQ48_RS03430 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS03440 SM00267 diguanylate cyclase CEQ48_RS03445 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ48_RS03450 SM00260 Two component signalling adaptor domain CEQ48_RS03450 SM00448 cheY-homologous receiver domain CEQ48_RS03460 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS03470 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CEQ48_RS03485 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS03515 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ48_RS03515 SM01134 CEQ48_RS03515 CEQ48_RS03520 SM00091 PAS domain CEQ48_RS03520 SM00267 diguanylate cyclase CEQ48_RS03530 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS03545 SM00357 Cold shock protein domain CEQ48_RS03570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS03570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS03600 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS03630 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS03645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS03645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS03680 SM00849 Metallo-beta-lactamase superfamily CEQ48_RS03690 SM01350 CEQ48_RS03690 CEQ48_RS03705 SM00481 DNA polymerase alpha chain like domain CEQ48_RS03745 SM00829 Enoylreductase CEQ48_RS03775 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS03780 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS04005 SM00357 Cold shock protein domain CEQ48_RS04010 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS04010 SM00357 Cold shock protein domain CEQ48_RS04010 SM00955 CEQ48_RS04010 CEQ48_RS04045 SM01240 CEQ48_RS04045 CEQ48_RS04050 SM00487 DEAD-like helicases superfamily CEQ48_RS04050 SM00490 helicase superfamily c-terminal domain CEQ48_RS04070 SM00448 cheY-homologous receiver domain CEQ48_RS04070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS04075 SM00387 Histidine kinase-like ATPases CEQ48_RS04105 SM00458 Ricin-type beta-trefoil CEQ48_RS04110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS04110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS04115 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CEQ48_RS04145 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS04150 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS04175 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS04240 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ48_RS04250 SM01007 Class II Aldolase and Adducin N-terminal domain CEQ48_RS04265 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ48_RS04265 SM01134 CEQ48_RS04265 CEQ48_RS04290 SM00448 cheY-homologous receiver domain CEQ48_RS04290 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS04295 SM00387 Histidine kinase-like ATPases CEQ48_RS04295 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS04305 SM00422 helix_turn_helix, mercury resistance CEQ48_RS04340 SM00825 Beta-ketoacyl synthase CEQ48_RS04345 SM00822 CEQ48_RS04345 CEQ48_RS04355 SM00825 Beta-ketoacyl synthase CEQ48_RS04415 SM00563 Phosphate acyltransferases CEQ48_RS04440 SM00357 Cold shock protein domain CEQ48_RS04440 SM00955 CEQ48_RS04440 CEQ48_RS04445 SM00487 DEAD-like helicases superfamily CEQ48_RS04445 SM00490 helicase superfamily c-terminal domain CEQ48_RS04450 SM00020 Trypsin-like serine protease CEQ48_RS04495 SM00271 DnaJ molecular chaperone homology domain CEQ48_RS04505 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS04505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CEQ48_RS04505 SM00267 diguanylate cyclase CEQ48_RS04520 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS04540 SM00797 Allophanate hydrolase subunit 2 CEQ48_RS04545 SM00796 Allophanate hydrolase subunit 1 CEQ48_RS04575 SM00487 DEAD-like helicases superfamily CEQ48_RS04575 SM00490 helicase superfamily c-terminal domain CEQ48_RS04600 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS04605 SM00327 von Willebrand factor (vWF) type A domain CEQ48_RS04615 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS04620 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS04620 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CEQ48_RS04735 SM00387 Histidine kinase-like ATPases CEQ48_RS04735 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS04735 SM00448 cheY-homologous receiver domain CEQ48_RS04775 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS04795 SM00989 CEQ48_RS04795 CEQ48_RS04800 SM00387 Histidine kinase-like ATPases CEQ48_RS04830 SM00014 Acid phosphatase homologues CEQ48_RS04840 SM00851 MGS-like domain CEQ48_RS04850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS04850 SM00387 Histidine kinase-like ATPases CEQ48_RS04850 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS04850 SM00448 cheY-homologous receiver domain CEQ48_RS04870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS04870 SM00387 Histidine kinase-like ATPases CEQ48_RS04870 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS04875 SM00448 cheY-homologous receiver domain CEQ48_RS04890 SM00495 Chitin-binding domain type 3 CEQ48_RS04890 SM00636 CEQ48_RS04890 CEQ48_RS04900 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CEQ48_RS04900 SM00267 diguanylate cyclase CEQ48_RS04955 SM00822 CEQ48_RS04955 CEQ48_RS04975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS04995 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CEQ48_RS05010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS05010 SM00387 Histidine kinase-like ATPases CEQ48_RS05015 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS05015 SM00448 cheY-homologous receiver domain CEQ48_RS05030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS05030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS05030 SM01358 CEQ48_RS05030 CEQ48_RS05060 SM00640 Glycosyl hydrolases family 32 CEQ48_RS05065 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS05105 SM00563 Phosphate acyltransferases CEQ48_RS05130 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS05130 SM00448 cheY-homologous receiver domain CEQ48_RS05135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS05135 SM00387 Histidine kinase-like ATPases CEQ48_RS05145 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CEQ48_RS05185 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS05230 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS05245 SM00387 Histidine kinase-like ATPases CEQ48_RS05245 SM00448 cheY-homologous receiver domain CEQ48_RS05275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS05275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS05280 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS05295 SM00867 YceI-like domain CEQ48_RS05300 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS05335 SM00782 PhnA Zinc-Ribbon CEQ48_RS05370 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS05370 SM00267 diguanylate cyclase CEQ48_RS05390 SM00267 diguanylate cyclase CEQ48_RS05405 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CEQ48_RS05405 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CEQ48_RS05415 SM00387 Histidine kinase-like ATPases CEQ48_RS05415 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS05420 SM00448 cheY-homologous receiver domain CEQ48_RS05420 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS05450 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS05485 SM00267 diguanylate cyclase CEQ48_RS05490 SM00448 cheY-homologous receiver domain CEQ48_RS05490 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS05495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS05495 SM00387 Histidine kinase-like ATPases CEQ48_RS05495 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS05505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS05505 SM00954 Region found in RelA / SpoT proteins CEQ48_RS05510 SM01409 CEQ48_RS05510 CEQ48_RS05515 SM00072 Guanylate kinase homologues. CEQ48_RS05535 SM01091 Transporter associated domain CEQ48_RS05540 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS05540 SM00448 cheY-homologous receiver domain CEQ48_RS05560 SM00267 diguanylate cyclase CEQ48_RS05580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS05580 SM00387 Histidine kinase-like ATPases CEQ48_RS05580 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS05585 SM00448 cheY-homologous receiver domain CEQ48_RS05585 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS05635 SM00919 Malic enzyme, NAD binding domain CEQ48_RS05635 SM01274 CEQ48_RS05635 CEQ48_RS05645 SM00487 DEAD-like helicases superfamily CEQ48_RS05645 SM00490 helicase superfamily c-terminal domain CEQ48_RS05650 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS05665 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS05665 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ48_RS05710 SM00883 Chaperonin 10 Kd subunit CEQ48_RS05730 SM00841 Elongation factor P, C-terminal CEQ48_RS05730 SM01185 CEQ48_RS05730 CEQ48_RS05760 SM00450 Rhodanese Homology Domain CEQ48_RS05775 SM00971 Serine acetyltransferase, N-terminal CEQ48_RS05795 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEQ48_RS05865 SM00965 Secretin and TonB N terminus short domain CEQ48_RS05945 SM01150 CEQ48_RS05945 CEQ48_RS05950 SM00100 Cyclic nucleotide-monophosphate binding domain CEQ48_RS05950 SM00419 helix_turn_helix, cAMP Regulatory protein CEQ48_RS05975 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS06005 SM00788 Adenylosuccinate synthetase CEQ48_RS06015 SM00671 Sel1-like repeats. CEQ48_RS06025 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS06025 SM00357 Cold shock protein domain CEQ48_RS06025 SM00955 CEQ48_RS06025 CEQ48_RS06030 SM00967 RNA 2'-O ribose methyltransferase substrate binding CEQ48_RS06035 SM01403 CEQ48_RS06035 CEQ48_RS06055 SM01382 CEQ48_RS06055 CEQ48_RS06055 SM01383 CEQ48_RS06055 CEQ48_RS06070 SM00322 K homology RNA-binding domain CEQ48_RS06090 SM01374 CEQ48_RS06090 CEQ48_RS06095 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CEQ48_RS06160 SM00363 S4 RNA-binding domain CEQ48_RS06160 SM01390 CEQ48_RS06160 CEQ48_RS06165 SM00662 RNA polymerases D CEQ48_RS06200 SM00487 DEAD-like helicases superfamily CEQ48_RS06200 SM00490 helicase superfamily c-terminal domain CEQ48_RS06250 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS06325 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS06340 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS06340 SM00924 MgtE intracellular N domain CEQ48_RS06370 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS06390 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS06405 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS06440 SM00563 Phosphate acyltransferases CEQ48_RS06465 SM00670 Large family of predicted nucleotide-binding domains CEQ48_RS06475 SM00487 DEAD-like helicases superfamily CEQ48_RS06475 SM00490 helicase superfamily c-terminal domain CEQ48_RS06535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS06585 SM01329 CEQ48_RS06585 CEQ48_RS06590 SM00917 LeuA allosteric (dimerisation) domain CEQ48_RS06600 SM00014 Acid phosphatase homologues CEQ48_RS06735 SM00358 Double-stranded RNA binding motif CEQ48_RS06735 SM00535 Ribonuclease III family CEQ48_RS06770 SM00267 diguanylate cyclase CEQ48_RS06775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS06775 SM00387 Histidine kinase-like ATPases CEQ48_RS06775 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS06775 SM00448 cheY-homologous receiver domain CEQ48_RS06785 SM00954 Region found in RelA / SpoT proteins CEQ48_RS06800 SM01192 CEQ48_RS06800 CEQ48_RS06800 SM01193 CEQ48_RS06800 CEQ48_RS06810 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS06820 SM00287 Bacterial SH3 domain homologues CEQ48_RS06835 SM00880 CEQ48_RS06835 CEQ48_RS06835 SM01118 CEQ48_RS06835 CEQ48_RS06840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS06880 SM00387 Histidine kinase-like ATPases CEQ48_RS06880 SM00433 TopoisomeraseII CEQ48_RS06885 SM00434 DNA Topoisomerase IV CEQ48_RS06930 SM00644 CEQ48_RS06930 CEQ48_RS06960 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ48_RS06960 SM00895 CEQ48_RS06960 CEQ48_RS07040 SM00842 Cell division protein FtsA CEQ48_RS07045 SM00864 Tubulin/FtsZ family, GTPase domain CEQ48_RS07045 SM00865 Tubulin/FtsZ family, C-terminal domain CEQ48_RS07060 SM00957 SecA DEAD-like domain CEQ48_RS07060 SM00958 SecA preprotein cross-linking domain CEQ48_RS07080 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CEQ48_RS07085 SM00851 MGS-like domain CEQ48_RS07085 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEQ48_RS07160 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS07165 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CEQ48_RS07165 SM00091 PAS domain CEQ48_RS07165 SM00267 diguanylate cyclase CEQ48_RS07170 SM00073 Histidine Phosphotransfer domain CEQ48_RS07170 SM00091 PAS domain CEQ48_RS07170 SM00387 Histidine kinase-like ATPases CEQ48_RS07170 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS07170 SM00448 cheY-homologous receiver domain CEQ48_RS07175 SM00448 cheY-homologous receiver domain CEQ48_RS07175 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS07220 SM00518 AP endonuclease family 2 CEQ48_RS07225 SM00986 Uracil DNA glycosylase superfamily CEQ48_RS07225 SM00987 UreE urease accessory protein, C-terminal domain CEQ48_RS07265 SM01133 CEQ48_RS07265 CEQ48_RS07270 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CEQ48_RS07300 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS07305 SM00838 Elongation factor G C-terminus CEQ48_RS07305 SM00889 Elongation factor G, domain IV CEQ48_RS07325 SM01038 Beta galactosidase small chain CEQ48_RS07330 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS07425 SM00925 MltA specific insert domain CEQ48_RS07460 SM00464 Found in ATP-dependent protease La (LON) CEQ48_RS07510 SM00900 CEQ48_RS07510 CEQ48_RS07550 SM00267 diguanylate cyclase CEQ48_RS07600 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CEQ48_RS07655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS07710 SM00935 Outer membrane protein (OmpH-like) CEQ48_RS07740 SM00481 DNA polymerase alpha chain like domain CEQ48_RS07750 SM00977 TilS substrate C-terminal domain CEQ48_RS07760 SM00938 Nitrogen regulatory protein P-II CEQ48_RS07770 SM00257 Lysin motif CEQ48_RS07775 SM00849 Metallo-beta-lactamase superfamily CEQ48_RS07790 SM00479 CEQ48_RS07790 CEQ48_RS07830 SM00363 S4 RNA-binding domain CEQ48_RS07835 SM00463 Small MutS-related domain CEQ48_RS07860 SM01081 Putative carbohydrate binding domain CEQ48_RS07930 SM00858 CEQ48_RS07930 CEQ48_RS07935 SM00260 Two component signalling adaptor domain CEQ48_RS07935 SM00448 cheY-homologous receiver domain CEQ48_RS07940 SM00138 Methyltransferase, chemotaxis proteins CEQ48_RS07985 SM00047 Lysozyme subfamily 2 CEQ48_RS08100 SM01400 CEQ48_RS08100 CEQ48_RS08120 SM00937 CEQ48_RS08120 CEQ48_RS08180 SM00028 Tetratricopeptide repeats CEQ48_RS08195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS08195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS08210 SM01130 CEQ48_RS08210 CEQ48_RS08295 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS08300 SM00091 PAS domain CEQ48_RS08300 SM00387 Histidine kinase-like ATPases CEQ48_RS08300 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS08305 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS08305 SM00448 cheY-homologous receiver domain CEQ48_RS08330 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS08390 SM00463 Small MutS-related domain CEQ48_RS08430 SM00825 Beta-ketoacyl synthase CEQ48_RS08440 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEQ48_RS08530 SM00861 Transketolase, pyrimidine binding domain CEQ48_RS08545 SM00881 CoA binding domain CEQ48_RS08555 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS08565 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS08570 SM00899 CEQ48_RS08570 CEQ48_RS08590 SM00836 DALR anticodon binding domain CEQ48_RS08590 SM01016 Arginyl tRNA synthetase N terminal dom CEQ48_RS08605 SM00855 Phosphoglycerate mutase family CEQ48_RS08615 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS08615 SM00962 SRP54-type protein, GTPase domain CEQ48_RS08630 SM00448 cheY-homologous receiver domain CEQ48_RS08640 SM00073 Histidine Phosphotransfer domain CEQ48_RS08640 SM00260 Two component signalling adaptor domain CEQ48_RS08640 SM00387 Histidine kinase-like ATPases CEQ48_RS08640 SM01231 CEQ48_RS08640 CEQ48_RS08645 SM00448 cheY-homologous receiver domain CEQ48_RS08655 SM00260 Two component signalling adaptor domain CEQ48_RS08660 SM00260 Two component signalling adaptor domain CEQ48_RS08670 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS08740 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEQ48_RS08740 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEQ48_RS08740 SM00493 CEQ48_RS08740 CEQ48_RS08775 SM00073 Histidine Phosphotransfer domain CEQ48_RS08785 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEQ48_RS08815 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS08830 SM00363 S4 RNA-binding domain CEQ48_RS08860 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CEQ48_RS08865 SM00822 CEQ48_RS08865 CEQ48_RS08875 SM00825 Beta-ketoacyl synthase CEQ48_RS08940 SM00260 Two component signalling adaptor domain CEQ48_RS08940 SM00448 cheY-homologous receiver domain CEQ48_RS08990 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ48_RS09010 SM00870 CEQ48_RS09010 CEQ48_RS09035 SM00487 DEAD-like helicases superfamily CEQ48_RS09035 SM00491 CEQ48_RS09035 CEQ48_RS09065 SM00474 3'-5' exonuclease CEQ48_RS09080 SM01144 CEQ48_RS09080 CEQ48_RS09085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS09090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS09120 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CEQ48_RS09135 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS09140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS09140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS09145 SM00563 Phosphate acyltransferases CEQ48_RS09155 SM00978 CEQ48_RS09155 CEQ48_RS09210 SM00495 Chitin-binding domain type 3 CEQ48_RS09210 SM00636 CEQ48_RS09210 CEQ48_RS09245 SM01006 Siderophore biosynthesis protein domain CEQ48_RS09265 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09300 SM00014 Acid phosphatase homologues CEQ48_RS09310 SM00563 Phosphate acyltransferases CEQ48_RS09360 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09360 SM00448 cheY-homologous receiver domain CEQ48_RS09365 SM00387 Histidine kinase-like ATPases CEQ48_RS09365 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS09385 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09385 SM00994 ClpX C4-type zinc finger CEQ48_RS09385 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ48_RS09390 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09390 SM00464 Found in ATP-dependent protease La (LON) CEQ48_RS09395 SM00411 bacterial (prokaryotic) histone like domain CEQ48_RS09405 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ48_RS09415 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS09420 SM00411 bacterial (prokaryotic) histone like domain CEQ48_RS09430 SM00028 Tetratricopeptide repeats CEQ48_RS09435 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ48_RS09455 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09460 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09510 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CEQ48_RS09510 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CEQ48_RS09515 SM00344 helix_turn_helix ASNC type CEQ48_RS09520 SM00843 CEQ48_RS09520 CEQ48_RS09535 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ48_RS09545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS09545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS09600 SM00487 DEAD-like helicases superfamily CEQ48_RS09600 SM00490 helicase superfamily c-terminal domain CEQ48_RS09600 SM00982 CEQ48_RS09600 CEQ48_RS09600 SM01058 CarD-like/TRCF domain CEQ48_RS09615 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09630 SM00849 Metallo-beta-lactamase superfamily CEQ48_RS09635 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09665 SM00763 PrkA AAA domain CEQ48_RS09685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS09685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS09705 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09710 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS09710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CEQ48_RS09750 SM00491 CEQ48_RS09750 CEQ48_RS09765 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS09780 SM00840 CEQ48_RS09780 CEQ48_RS09790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ48_RS09795 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09865 SM00387 Histidine kinase-like ATPases CEQ48_RS09865 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS09865 SM00448 cheY-homologous receiver domain CEQ48_RS09880 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS09935 SM01130 CEQ48_RS09935 CEQ48_RS10000 SM01276 CEQ48_RS10000 CEQ48_RS10035 SM01321 CEQ48_RS10035 CEQ48_RS10040 SM00246 Wiskott Aldrich syndrome homology region 2 CEQ48_RS10160 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS10195 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS10225 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS10265 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS10270 SM00564 beta-propeller repeat CEQ48_RS10295 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS10375 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS10405 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEQ48_RS10405 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEQ48_RS10405 SM00493 CEQ48_RS10405 CEQ48_RS10445 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS10460 SM00448 cheY-homologous receiver domain CEQ48_RS10460 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS10490 SM00344 helix_turn_helix ASNC type CEQ48_RS10500 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS10505 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS10505 SM00091 PAS domain CEQ48_RS10625 SM01131 CEQ48_RS10625 CEQ48_RS10640 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS10645 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS10665 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS10700 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEQ48_RS10715 SM00155 Phospholipase D. Active site motifs. CEQ48_RS10745 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS10780 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS10800 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS10805 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS10805 SM00387 Histidine kinase-like ATPases CEQ48_RS10805 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS10805 SM00448 cheY-homologous receiver domain CEQ48_RS10810 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS10810 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS10810 SM00448 cheY-homologous receiver domain CEQ48_RS10850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS10850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS10875 SM00387 Histidine kinase-like ATPases CEQ48_RS10880 SM00448 cheY-homologous receiver domain CEQ48_RS10880 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS10890 SM00487 DEAD-like helicases superfamily CEQ48_RS10890 SM00490 helicase superfamily c-terminal domain CEQ48_RS10895 SM00363 S4 RNA-binding domain CEQ48_RS10920 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS10975 SM00112 Cadherin repeats. CEQ48_RS11020 SM00028 Tetratricopeptide repeats CEQ48_RS11020 SM00386 HAT (Half-A-TPR) repeats CEQ48_RS11060 SM00387 Histidine kinase-like ATPases CEQ48_RS11065 SM00448 cheY-homologous receiver domain CEQ48_RS11070 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS11075 SM00260 Two component signalling adaptor domain CEQ48_RS11075 SM00448 cheY-homologous receiver domain CEQ48_RS11090 SM00267 diguanylate cyclase CEQ48_RS11125 SM00267 diguanylate cyclase CEQ48_RS11130 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS11135 SM01060 CEQ48_RS11135 CEQ48_RS11140 SM00248 ankyrin repeats CEQ48_RS11145 SM01022 CEQ48_RS11145 CEQ48_RS11165 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS11195 SM00849 Metallo-beta-lactamase superfamily CEQ48_RS11245 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ48_RS11245 SM01134 CEQ48_RS11245 CEQ48_RS11250 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS11375 SM00852 Probable molybdopterin binding domain CEQ48_RS11385 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11400 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11400 SM00448 cheY-homologous receiver domain CEQ48_RS11405 SM00387 Histidine kinase-like ATPases CEQ48_RS11405 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS11410 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11505 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS11525 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11535 SM00945 ProQ/FINO family CEQ48_RS11540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ48_RS11540 SM00245 tail specific protease CEQ48_RS11580 SM00981 CEQ48_RS11580 CEQ48_RS11590 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11630 SM00387 Histidine kinase-like ATPases CEQ48_RS11630 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS11630 SM00448 cheY-homologous receiver domain CEQ48_RS11635 SM00897 FIST N domain CEQ48_RS11635 SM01204 CEQ48_RS11635 CEQ48_RS11685 SM00100 Cyclic nucleotide-monophosphate binding domain CEQ48_RS11685 SM00419 helix_turn_helix, cAMP Regulatory protein CEQ48_RS11715 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11790 SM00487 DEAD-like helicases superfamily CEQ48_RS11790 SM00490 helicase superfamily c-terminal domain CEQ48_RS11795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CEQ48_RS11795 SM00091 PAS domain CEQ48_RS11795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS11800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS11800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS11845 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11845 SM00487 DEAD-like helicases superfamily CEQ48_RS11845 SM00490 helicase superfamily c-terminal domain CEQ48_RS11845 SM00847 Helicase associated domain (HA2) Add an annotation CEQ48_RS11860 SM00479 CEQ48_RS11860 CEQ48_RS11865 SM00267 diguanylate cyclase CEQ48_RS11865 SM01079 CEQ48_RS11865 CEQ48_RS11890 SM00267 diguanylate cyclase CEQ48_RS11900 SM00267 diguanylate cyclase CEQ48_RS11915 SM00028 Tetratricopeptide repeats CEQ48_RS11915 SM00267 diguanylate cyclase CEQ48_RS11940 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS11955 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS11975 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CEQ48_RS11980 SM00267 diguanylate cyclase CEQ48_RS11995 SM00073 Histidine Phosphotransfer domain CEQ48_RS11995 SM00091 PAS domain CEQ48_RS11995 SM00387 Histidine kinase-like ATPases CEQ48_RS11995 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS11995 SM00448 cheY-homologous receiver domain CEQ48_RS12000 SM00448 cheY-homologous receiver domain CEQ48_RS12000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS12065 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ48_RS12065 SM00895 CEQ48_RS12065 CEQ48_RS12070 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS12070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS12105 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS12135 SM00448 cheY-homologous receiver domain CEQ48_RS12140 SM00387 Histidine kinase-like ATPases CEQ48_RS12150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS12150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS12155 SM01005 Alanine racemase, C-terminal domain CEQ48_RS12185 SM00091 PAS domain CEQ48_RS12185 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS12235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS12235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS12250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS12250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ48_RS12270 SM00100 Cyclic nucleotide-monophosphate binding domain CEQ48_RS12270 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS12275 SM00479 CEQ48_RS12275 CEQ48_RS12280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS12280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS12295 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS12325 SM00495 Chitin-binding domain type 3 CEQ48_RS12335 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ48_RS12340 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS12340 SM00448 cheY-homologous receiver domain CEQ48_RS12345 SM00387 Histidine kinase-like ATPases CEQ48_RS12345 SM01049 CEQ48_RS12345 CEQ48_RS12380 SM00849 Metallo-beta-lactamase superfamily CEQ48_RS12430 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS12435 SM00450 Rhodanese Homology Domain CEQ48_RS12440 SM00357 Cold shock protein domain CEQ48_RS12490 SM00434 DNA Topoisomerase IV CEQ48_RS12520 SM00852 Probable molybdopterin binding domain CEQ48_RS12535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS12535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS12535 SM01049 CEQ48_RS12535 CEQ48_RS12555 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS12570 SM00855 Phosphoglycerate mutase family CEQ48_RS12650 SM00411 bacterial (prokaryotic) histone like domain CEQ48_RS12655 SM00873 B3/4 domain CEQ48_RS12655 SM00874 tRNA synthetase B5 domain CEQ48_RS12655 SM00896 Ferredoxin-fold anticodon binding domain CEQ48_RS12670 SM00267 diguanylate cyclase CEQ48_RS12700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ48_RS12700 SM00465 GIY-YIG type nucleases (URI domain) CEQ48_RS12705 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS12705 SM00448 cheY-homologous receiver domain CEQ48_RS12710 SM00486 DNA polymerase type-B family CEQ48_RS12715 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS12725 SM00841 Elongation factor P, C-terminal CEQ48_RS12725 SM01185 CEQ48_RS12725 CEQ48_RS12740 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ48_RS12740 SM00866 CEQ48_RS12740 CEQ48_RS12770 SM00020 Trypsin-like serine protease CEQ48_RS12805 SM00271 DnaJ molecular chaperone homology domain CEQ48_RS12805 SM00671 Sel1-like repeats. CEQ48_RS12830 SM00919 Malic enzyme, NAD binding domain CEQ48_RS12830 SM01274 CEQ48_RS12830 CEQ48_RS12845 SM00267 diguanylate cyclase CEQ48_RS12865 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS12870 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS12875 SM00363 S4 RNA-binding domain CEQ48_RS12885 SM00481 DNA polymerase alpha chain like domain CEQ48_RS12980 SM00387 Histidine kinase-like ATPases CEQ48_RS12985 SM00448 cheY-homologous receiver domain CEQ48_RS13040 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS13040 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ48_RS13050 SM00357 Cold shock protein domain CEQ48_RS13110 SM00528 Domain in histone-like proteins of HNS family CEQ48_RS13200 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS13200 SM00876 Biotin and Thiamin Synthesis associated domain CEQ48_RS13215 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS13235 SM00267 diguanylate cyclase CEQ48_RS13240 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS13280 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS13285 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS13310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS13310 SM00387 Histidine kinase-like ATPases CEQ48_RS13315 SM00448 cheY-homologous receiver domain CEQ48_RS13320 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS13320 SM00448 cheY-homologous receiver domain CEQ48_RS13325 SM00387 Histidine kinase-like ATPases CEQ48_RS13330 SM00387 Histidine kinase-like ATPases CEQ48_RS13330 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS13340 SM00448 cheY-homologous receiver domain CEQ48_RS13420 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ48_RS13420 SM01134 CEQ48_RS13420 CEQ48_RS13425 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ48_RS13425 SM01134 CEQ48_RS13425 CEQ48_RS13440 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ48_RS13445 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ48_RS13540 SM00487 DEAD-like helicases superfamily CEQ48_RS13550 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS13575 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS13575 SM00267 diguanylate cyclase CEQ48_RS13600 SM00344 helix_turn_helix ASNC type CEQ48_RS13630 SM00493 CEQ48_RS13630 CEQ48_RS13640 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS13660 SM00448 cheY-homologous receiver domain CEQ48_RS13705 SM00226 Low molecular weight phosphatase family CEQ48_RS13765 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS13770 SM00267 diguanylate cyclase CEQ48_RS13790 SM00852 Probable molybdopterin binding domain CEQ48_RS13795 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS13810 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS13810 SM00448 cheY-homologous receiver domain CEQ48_RS13820 SM00487 DEAD-like helicases superfamily CEQ48_RS13820 SM00490 helicase superfamily c-terminal domain CEQ48_RS13860 SM00478 endonuclease III CEQ48_RS13860 SM00525 CEQ48_RS13860 CEQ48_RS13955 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CEQ48_RS13955 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CEQ48_RS13975 SM00387 Histidine kinase-like ATPases CEQ48_RS13980 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS14020 SM00244 prohibitin homologues CEQ48_RS14030 SM00422 helix_turn_helix, mercury resistance CEQ48_RS14045 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ48_RS14045 SM00292 breast cancer carboxy-terminal domain CEQ48_RS14045 SM00532 Ligase N family CEQ48_RS14050 SM00771 ZipA, C-terminal domain (FtsZ-binding) CEQ48_RS14090 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS14105 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS14105 SM01091 Transporter associated domain CEQ48_RS14160 SM00936 Penicillin-binding protein 5, C-terminal domain CEQ48_RS14175 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS14295 SM00984 UDP binding domain CEQ48_RS14305 SM00226 Low molecular weight phosphatase family CEQ48_RS14350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS14350 SM00387 Histidine kinase-like ATPases CEQ48_RS14350 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS14355 SM00448 cheY-homologous receiver domain CEQ48_RS14355 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS14360 SM00642 Alpha-amylase domain CEQ48_RS14370 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS14380 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS14380 SM00930 CEQ48_RS14380 CEQ48_RS14410 SM00028 Tetratricopeptide repeats CEQ48_RS14415 SM00267 diguanylate cyclase CEQ48_RS14425 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEQ48_RS14425 SM00475 5'-3' exonuclease CEQ48_RS14445 SM00981 CEQ48_RS14445 CEQ48_RS14470 SM00861 Transketolase, pyrimidine binding domain CEQ48_RS14550 SM01211 CEQ48_RS14550 CEQ48_RS14560 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS14575 SM00829 Enoylreductase CEQ48_RS14620 SM00271 DnaJ molecular chaperone homology domain CEQ48_RS14705 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS14715 SM00487 DEAD-like helicases superfamily CEQ48_RS14715 SM00490 helicase superfamily c-terminal domain CEQ48_RS14770 SM00764 Citrate lyase ligase C-terminal domain CEQ48_RS14795 SM00091 PAS domain CEQ48_RS14795 SM00387 Histidine kinase-like ATPases CEQ48_RS14800 SM00448 cheY-homologous receiver domain CEQ48_RS14810 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS14835 SM00849 Metallo-beta-lactamase superfamily CEQ48_RS14850 SM00495 Chitin-binding domain type 3 CEQ48_RS14865 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS14875 SM00833 Cobalamin synthesis protein cobW C-terminal domain CEQ48_RS14925 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ48_RS14925 SM00866 CEQ48_RS14925 CEQ48_RS14955 SM00422 helix_turn_helix, mercury resistance CEQ48_RS15035 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS15035 SM01240 CEQ48_RS15035 CEQ48_RS15055 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15060 SM00564 beta-propeller repeat CEQ48_RS15080 SM00530 Helix-turn-helix XRE-family like proteins CEQ48_RS15090 SM00562 CEQ48_RS15090 CEQ48_RS15115 SM00271 DnaJ molecular chaperone homology domain CEQ48_RS15160 SM01323 CEQ48_RS15160 CEQ48_RS15180 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS15220 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15250 SM00091 PAS domain CEQ48_RS15250 SM00387 Histidine kinase-like ATPases CEQ48_RS15250 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS15255 SM00448 cheY-homologous receiver domain CEQ48_RS15255 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS15325 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15325 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ48_RS15335 SM00363 S4 RNA-binding domain CEQ48_RS15350 SM00830 Chorismate mutase type II CEQ48_RS15360 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS15360 SM00267 diguanylate cyclase CEQ48_RS15380 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15390 SM00830 Chorismate mutase type II CEQ48_RS15405 SM00448 cheY-homologous receiver domain CEQ48_RS15405 SM00850 LytTr DNA-binding domain CEQ48_RS15460 SM00904 Riboflavin kinase CEQ48_RS15475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ48_RS15505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CEQ48_RS15515 SM00927 DNA mismatch repair enzyme MutH CEQ48_RS15530 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15555 SM00487 DEAD-like helicases superfamily CEQ48_RS15555 SM00490 helicase superfamily c-terminal domain CEQ48_RS15565 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS15565 SM00267 diguanylate cyclase CEQ48_RS15590 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS15590 SM00091 PAS domain CEQ48_RS15590 SM00267 diguanylate cyclase CEQ48_RS15610 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ48_RS15615 SM00028 Tetratricopeptide repeats CEQ48_RS15620 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS15620 SM00322 K homology RNA-binding domain CEQ48_RS15625 SM01387 CEQ48_RS15625 CEQ48_RS15645 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS15645 SM00322 K homology RNA-binding domain CEQ48_RS15685 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15695 SM01103 CEQ48_RS15695 CEQ48_RS15715 SM00363 S4 RNA-binding domain CEQ48_RS15755 SM00091 PAS domain CEQ48_RS15755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS15755 SM00387 Histidine kinase-like ATPases CEQ48_RS15755 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS15755 SM00448 cheY-homologous receiver domain CEQ48_RS15775 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15780 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15800 SM01068 Putative carbohydrate binding domain CEQ48_RS15810 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15830 SM00938 Nitrogen regulatory protein P-II CEQ48_RS15855 SM00487 DEAD-like helicases superfamily CEQ48_RS15855 SM00490 helicase superfamily c-terminal domain CEQ48_RS15855 SM00847 Helicase associated domain (HA2) Add an annotation CEQ48_RS15905 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS15915 SM00947 Carbonic anhydrase CEQ48_RS15955 SM00749 bacterial OsmY and nodulation domain CEQ48_RS16005 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ48_RS16035 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS16035 SM00962 SRP54-type protein, GTPase domain CEQ48_RS16035 SM00963 SRP54-type protein, helical bundle domain CEQ48_RS16045 SM01091 Transporter associated domain CEQ48_RS16070 SM00829 Enoylreductase CEQ48_RS16145 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEQ48_RS16155 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS16165 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS16190 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CEQ48_RS16190 SM00534 ATPase domain of DNA mismatch repair MUTS family CEQ48_RS16200 SM00257 Lysin motif CEQ48_RS16255 SM01207 CEQ48_RS16255 CEQ48_RS16280 SM00400 zinc finger CEQ48_RS16280 SM00493 CEQ48_RS16280 CEQ48_RS16280 SM00766 DNA primase DnaG DnaB-binding CEQ48_RS16295 SM00563 Phosphate acyltransferases CEQ48_RS16365 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS16385 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ48_RS16385 SM01134 CEQ48_RS16385 CEQ48_RS16430 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ48_RS16445 SM00861 Transketolase, pyrimidine binding domain CEQ48_RS16455 SM00731 SprT homologues. CEQ48_RS16480 SM00732 Likely ribonuclease with RNase H fold. CEQ48_RS16490 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS16525 SM01152 CEQ48_RS16525 CEQ48_RS16540 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS16555 SM00478 endonuclease III CEQ48_RS16555 SM00525 CEQ48_RS16555 CEQ48_RS16590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS16590 SM01049 CEQ48_RS16590 CEQ48_RS16625 SM00271 DnaJ molecular chaperone homology domain CEQ48_RS16645 SM00650 Ribosomal RNA adenine dimethylases CEQ48_RS16785 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS16810 SM00560 LamG-like jellyroll fold domain CEQ48_RS16855 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS16860 SM00028 Tetratricopeptide repeats CEQ48_RS16870 SM00965 Secretin and TonB N terminus short domain CEQ48_RS16890 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS16890 SM00267 diguanylate cyclase CEQ48_RS16970 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS17000 SM01018 B12 binding domain CEQ48_RS17135 SM01005 Alanine racemase, C-terminal domain CEQ48_RS17140 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS17185 SM00838 Elongation factor G C-terminus CEQ48_RS17185 SM00889 Elongation factor G, domain IV CEQ48_RS17225 SM00320 WD40 repeats CEQ48_RS17240 SM00244 prohibitin homologues CEQ48_RS17245 SM00244 prohibitin homologues CEQ48_RS17265 SM00853 MutL C terminal dimerisation domain CEQ48_RS17265 SM01340 CEQ48_RS17265 CEQ48_RS17270 SM00257 Lysin motif CEQ48_RS17270 SM00646 CEQ48_RS17270 CEQ48_RS17330 SM00479 CEQ48_RS17330 CEQ48_RS17390 SM00663 RNA polymerase I subunit A N-terminus CEQ48_RS17415 SM00649 Ribosomal protein L11/L12 CEQ48_RS17420 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CEQ48_RS17420 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CEQ48_RS17475 SM00155 Phospholipase D. Active site motifs. CEQ48_RS17530 SM00357 Cold shock protein domain CEQ48_RS17530 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS17530 SM00959 Rho termination factor, N-terminal domain CEQ48_RS17540 SM00487 DEAD-like helicases superfamily CEQ48_RS17540 SM00490 helicase superfamily c-terminal domain CEQ48_RS17550 SM00387 Histidine kinase-like ATPases CEQ48_RS17550 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS17550 SM00448 cheY-homologous receiver domain CEQ48_RS17565 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ48_RS17570 SM00479 CEQ48_RS17570 CEQ48_RS17590 SM00878 Biotin carboxylase C-terminal domain CEQ48_RS17610 SM00354 helix_turn _helix lactose operon repressor CEQ48_RS17645 SM00862 Transcriptional regulatory protein, C terminal CEQ48_RS17650 SM00422 helix_turn_helix, mercury resistance CEQ48_RS17660 SM00798 AICARFT/IMPCHase bienzyme CEQ48_RS17660 SM00851 MGS-like domain CEQ48_RS17665 SM01209 CEQ48_RS17665 CEQ48_RS17665 SM01210 CEQ48_RS17665 CEQ48_RS17675 SM00411 bacterial (prokaryotic) histone like domain CEQ48_RS17700 SM00986 Uracil DNA glycosylase superfamily CEQ48_RS17700 SM00987 UreE urease accessory protein, C-terminal domain CEQ48_RS17710 SM00849 Metallo-beta-lactamase superfamily CEQ48_RS17710 SM01027 Beta-Casp domain CEQ48_RS17780 SM00226 Low molecular weight phosphatase family CEQ48_RS17880 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS18010 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CEQ48_RS18010 SM01232 CEQ48_RS18010 CEQ48_RS18035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS18035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ48_RS18035 SM01049 CEQ48_RS18035 CEQ48_RS18145 SM00912 haemagglutination activity domain CEQ48_RS18160 SM00257 Lysin motif CEQ48_RS18265 SM00341 Helicase and RNase D C-terminal CEQ48_RS18265 SM00487 DEAD-like helicases superfamily CEQ48_RS18265 SM00490 helicase superfamily c-terminal domain CEQ48_RS18265 SM00956 CEQ48_RS18265 CEQ48_RS18280 SM00342 helix_turn_helix, arabinose operon control protein CEQ48_RS18330 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS18405 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS18595 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS18635 SM00470 ParB-like nuclease domain CEQ48_RS18650 SM01228 CEQ48_RS18650 CEQ48_RS18675 SM01234 CEQ48_RS18675 CEQ48_RS18690 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS18700 SM00062 Bacterial periplasmic substrate-binding proteins CEQ48_RS18705 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS18705 SM00760 Bacterial dnaA protein helix-turn-helix domain CEQ48_RS18710 SM00480 DNA polymerase III beta subunit CEQ48_RS18720 SM00387 Histidine kinase-like ATPases CEQ48_RS18720 SM00433 TopoisomeraseII CEQ48_RS18775 SM00829 Enoylreductase CEQ48_RS18810 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS18815 SM00563 Phosphate acyltransferases CEQ48_RS18885 SM00257 Lysin motif CEQ48_RS18910 SM01001 AIR carboxylase CEQ48_RS19010 SM00876 Biotin and Thiamin Synthesis associated domain CEQ48_RS19035 SM00344 helix_turn_helix ASNC type CEQ48_RS19040 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS19040 SM00091 PAS domain CEQ48_RS19040 SM00267 diguanylate cyclase CEQ48_RS19135 SM00091 PAS domain CEQ48_RS19135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CEQ48_RS19205 SM00563 Phosphate acyltransferases CEQ48_RS19235 SM00450 Rhodanese Homology Domain CEQ48_RS19250 SM01004 Delta-aminolevulinic acid dehydratase CEQ48_RS19265 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEQ48_RS19265 SM00474 3'-5' exonuclease CEQ48_RS19265 SM00475 5'-3' exonuclease CEQ48_RS19265 SM00482 DNA polymerase A domain CEQ48_RS19295 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ48_RS19330 SM01219 CEQ48_RS19330 CEQ48_RS19365 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS19365 SM00267 diguanylate cyclase CEQ48_RS19365 SM00897 FIST N domain CEQ48_RS19365 SM01204 CEQ48_RS19365 CEQ48_RS19370 SM01144 CEQ48_RS19370 CEQ48_RS19445 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS19445 SM00962 SRP54-type protein, GTPase domain CEQ48_RS19445 SM00963 SRP54-type protein, helical bundle domain CEQ48_RS19450 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS19500 SM00360 RNA recognition motif CEQ48_RS19580 SM00052 Putative diguanylate phosphodiesterase CEQ48_RS19580 SM00267 diguanylate cyclase CEQ48_RS19585 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS19585 SM00448 cheY-homologous receiver domain CEQ48_RS19590 SM00091 PAS domain CEQ48_RS19590 SM00387 Histidine kinase-like ATPases CEQ48_RS19590 SM00388 His Kinase A (phosphoacceptor) domain CEQ48_RS19600 SM01230 CEQ48_RS19600 CEQ48_RS19650 SM00363 S4 RNA-binding domain CEQ48_RS19665 SM00382 ATPases associated with a variety of cellular activities CEQ48_RS19745 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ48_RS19745 SM00732 Likely ribonuclease with RNase H fold. CEQ48_RS19755 SM00421 helix_turn_helix, Lux Regulon CEQ48_RS19765 SM00382 ATPases associated with a variety of cellular activities