locus-tag	class	description
VEJY3_RS00005	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VEJY3_RS00015	COG0706	membrane insertase activity
VEJY3_RS00020	COG0594	ribonuclease P activity
VEJY3_RS00030	COG1126	abc transporter atp-binding protein
VEJY3_RS00050	COG0592	DNA-directed DNA polymerase activity
VEJY3_RS00055	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
VEJY3_RS00060	COG0187	DNA topoisomerase II activity
VEJY3_RS00070	COG0071	Belongs to the small heat shock protein (HSP20) family
VEJY3_RS00075	COG3977	Valine--pyruvate aminotransferase
VEJY3_RS00080	COG0366	Alpha amylase catalytic
VEJY3_RS00085	COG0751	glycine-tRNA ligase activity
VEJY3_RS00095	COG2119	membrane
VEJY3_RS00105	COG0425	Belongs to the sulfur carrier protein TusA family
VEJY3_RS00120	COG0604	alcohol dehydrogenase
VEJY3_RS00125	COG0183	Belongs to the thiolase family
VEJY3_RS00130	COG1024	Enoyl-CoA hydratase
VEJY3_RS00130	COG1250	3-hydroxyacyl-CoA dehydrogenase
VEJY3_RS00135	COG1739	Uncharacterized protein family UPF0029
VEJY3_RS00140	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VEJY3_RS00180	COG0583	DNA-binding transcription factor activity
VEJY3_RS00185	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
VEJY3_RS00190	COG2960	long-chain fatty acid transporting porin activity
VEJY3_RS00195	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VEJY3_RS00200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_RS00205	COG1309	transcriptional regulator
VEJY3_RS00260	COG4166	transmembrane transport
VEJY3_RS00265	COG0601	transmembrane transport
VEJY3_RS00270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VEJY3_RS00280	COG1609	Transcriptional regulator
VEJY3_RS00285	COG0129	dihydroxy-acid dehydratase activity
VEJY3_RS00290	COG3265	gluconokinase activity
VEJY3_RS00295	COG2610	gluconate transmembrane transporter activity
VEJY3_RS00300	COG0800	Aldolase
VEJY3_RS00305	COG3721	Heme iron utilization protein
VEJY3_RS00310	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VEJY3_RS00315	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
VEJY3_RS00325	COG1522	sequence-specific DNA binding
VEJY3_RS00330	COG0742	ribosomal rna small subunit methyltransferase
VEJY3_RS00345	COG0589	response to stress
VEJY3_RS00350	COG1528	Iron-storage protein
VEJY3_RS00360	COG2081	HI0933 family
VEJY3_RS00390	COG4964	Belongs to the GSP D family
VEJY3_RS00440	COG0748	coenzyme F420 binding
VEJY3_RS00450	COG4988	ABC transporter
VEJY3_RS00455	COG1132	(ABC) transporter
VEJY3_RS00475	COG1322	Protein conserved in bacteria
VEJY3_RS00480	COG2226	methyltransferase
VEJY3_RS00485	COG3165	ubiquinone biosynthetic process from chorismate
VEJY3_RS00490	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
VEJY3_RS00500	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
VEJY3_RS00505	COG0805	protein transport
VEJY3_RS00510	COG3263	regulation of cellular component size
VEJY3_RS00515	COG0084	hydrolase, TatD family'
VEJY3_RS00535	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VEJY3_RS00535	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VEJY3_RS00540	COG0218	Necessary for normal cell division and for the maintenance of normal septation
VEJY3_RS00570	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
VEJY3_RS00580	COG2204	response regulator
VEJY3_RS00585	COG3852	Histidine kinase
VEJY3_RS00595	COG0174	glutamine synthetase
VEJY3_RS00600	COG1217	gtp-binding protein TYPA
VEJY3_RS00615	COG1295	ribonuclease BN
VEJY3_RS00620	COG1490	D-aminoacyl-tRNA deacylase activity
VEJY3_RS00625	COG0456	acetyltransferase
VEJY3_RS00635	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
VEJY3_RS00640	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
VEJY3_RS00645	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
VEJY3_RS00650	COG3031	protein transport across the cell outer membrane
VEJY3_RS00660	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VEJY3_RS00665	COG1459	type II secretion system
VEJY3_RS00670	COG2165	general secretion pathway protein
VEJY3_RS00675	COG2165	general secretion pathway protein
VEJY3_RS00680	COG2165	general secretion pathway protein
VEJY3_RS00685	COG4795	General secretion pathway protein
VEJY3_RS00690	COG3156	type II secretion system protein K
VEJY3_RS00695	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VEJY3_RS00700	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VEJY3_RS00710	COG1218	3'(2'),5'-bisphosphate nucleotidase
VEJY3_RS00715	COG0494	nUDIX hydrolase
VEJY3_RS00725	COG1040	competence protein
VEJY3_RS00730	COG0596	Alpha beta hydrolase
VEJY3_RS00740	COG2183	response to ionizing radiation
VEJY3_RS00750	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VEJY3_RS00770	COG2233	PERMEase
VEJY3_RS00775	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
VEJY3_RS00780	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VEJY3_RS00785	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VEJY3_RS00790	COG1758	RNA polymerase activity
VEJY3_RS00795	COG0194	GDP metabolic process
VEJY3_RS00810	COG0848	biopolymer transport protein
VEJY3_RS00815	COG0811	peptide transport
VEJY3_RS00835	COG4174	ABC transporter (Permease)
VEJY3_RS00840	COG4239	(ABC) transporter, permease
VEJY3_RS00850	COG0444	Belongs to the ABC transporter superfamily
VEJY3_RS00855	COG4608	Belongs to the ABC transporter superfamily
VEJY3_RS00880	COG1561	YicC-like family, N-terminal region
VEJY3_RS00885	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
VEJY3_RS00890	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
VEJY3_RS00895	COG1560	Kdo2-lipid A biosynthetic process
VEJY3_RS00900	COG1309	transcriptional regulator
VEJY3_RS00905	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
VEJY3_RS00910	COG2003	Belongs to the UPF0758 family
VEJY3_RS00930	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
VEJY3_RS00935	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
VEJY3_RS00940	COG0438	transferase activity, transferring glycosyl groups
VEJY3_RS00945	COG0859	PFAM glycosyl transferase family 9
VEJY3_RS00955	COG0438	transferase activity, transferring glycosyl groups
VEJY3_RS00960	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
VEJY3_RS00965	COG3642	lipopolysaccharide core region biosynthetic process
VEJY3_RS00970	COG0562	UDP-galactopyranose mutase
VEJY3_RS00985	COG1519	Transferase
VEJY3_RS00990	COG0859	PFAM glycosyl transferase family 9
VEJY3_RS00995	COG1560	Kdo2-lipid A biosynthetic process
VEJY3_RS01005	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VEJY3_RS01035	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
VEJY3_RS01100	COG1482	cell wall glycoprotein biosynthetic process
VEJY3_RS01105	COG1215	transferase activity, transferring glycosyl groups
VEJY3_RS01110	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VEJY3_RS01115	COG1596	polysaccharide export
VEJY3_RS01135	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
VEJY3_RS01145	COG2244	polysaccharide biosynthetic process
VEJY3_RS01165	COG0438	transferase activity, transferring glycosyl groups
VEJY3_RS01170	COG1215	transferase activity, transferring glycosyl groups
VEJY3_RS01180	COG1216	Glycosyl transferase, family 2
VEJY3_RS01185	COG0297	glycogen (starch) synthase activity
VEJY3_RS01190	COG0438	transferase activity, transferring glycosyl groups
VEJY3_RS01205	COG1482	cell wall glycoprotein biosynthetic process
VEJY3_RS01210	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
VEJY3_RS01225	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
VEJY3_RS01235	COG0149	triose-phosphate isomerase activity
VEJY3_RS01250	COG3152	Membrane
VEJY3_RS01265	COG1494	fructose-1,6-bisphosphatase
VEJY3_RS01275	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VEJY3_RS01280	COG1575	Belongs to the MenA family. Type 1 subfamily
VEJY3_RS01285	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
VEJY3_RS01300	COG1609	Transcriptional regulator
VEJY3_RS01305	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
VEJY3_RS01310	COG0254	rRNA binding
VEJY3_RS01320	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
VEJY3_RS01325	COG0088	Forms part of the polypeptide exit tunnel
VEJY3_RS01335	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
VEJY3_RS01340	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
VEJY3_RS01345	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
VEJY3_RS01350	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
VEJY3_RS01360	COG0255	Belongs to the universal ribosomal protein uL29 family
VEJY3_RS01365	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
VEJY3_RS01375	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
VEJY3_RS01380	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
VEJY3_RS01395	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
VEJY3_RS01410	COG1841	ribosomal large subunit assembly
VEJY3_RS01415	COG0200	Binds to the 23S rRNA
VEJY3_RS01420	COG0201	protein transport
VEJY3_RS01425	COG0257	Belongs to the bacterial ribosomal protein bL36 family
VEJY3_RS01430	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
VEJY3_RS01435	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
VEJY3_RS01445	COG0202	RNA polymerase activity
VEJY3_RS01450	COG0203	ribosomal protein L17
VEJY3_RS01460	COG0545	Peptidyl-prolyl cis-trans isomerase
VEJY3_RS01470	COG2153	protein acetylation
VEJY3_RS01475	COG0513	Belongs to the DEAD box helicase family
VEJY3_RS01485	COG0737	Belongs to the 5'-nucleotidase family
VEJY3_RS01490	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
VEJY3_RS01490	COG1648	precorrin-2 dehydrogenase activity
VEJY3_RS01495	COG0175	sulfate reduction
VEJY3_RS01500	COG2895	sulfate adenylyltransferase (ATP) activity
VEJY3_RS01505	COG0471	metal ion transport
VEJY3_RS01505	COG3273	potassium ion transport
VEJY3_RS01510	COG0529	Catalyzes the synthesis of activated sulfate
VEJY3_RS01530	COG1136	(ABC) transporter
VEJY3_RS01540	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
VEJY3_RS01550	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VEJY3_RS01560	COG2911	Protein conserved in bacteria
VEJY3_RS01565	COG2105	PFAM AIG2 family protein
VEJY3_RS01570	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
VEJY3_RS01575	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
VEJY3_RS01580	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VEJY3_RS01585	COG0163	prenyltransferase activity
VEJY3_RS01595	COG1178	ABC-type Fe3 transport system permease component
VEJY3_RS01600	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
VEJY3_RS01625	COG0039	L-malate dehydrogenase activity
VEJY3_RS01635	COG0142	geranyltranstransferase activity
VEJY3_RS01640	COG0261	This protein binds to 23S rRNA in the presence of protein L20
VEJY3_RS01650	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
VEJY3_RS01655	COG2966	Psort location CytoplasmicMembrane, score
VEJY3_RS01665	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
VEJY3_RS01675	COG2967	ApaG domain
VEJY3_RS01680	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
VEJY3_RS01685	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VEJY3_RS01690	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VEJY3_RS01695	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
VEJY3_RS01700	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
VEJY3_RS01710	COG0066	3-isopropylmalate dehydratase activity
VEJY3_RS01720	COG0473	3-isopropylmalate dehydrogenase activity
VEJY3_RS01725	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
VEJY3_RS01735	COG0671	phosphoesterase, PA-phosphatase related
VEJY3_RS01745	COG0583	DNA-binding transcription factor activity
VEJY3_RS01750	COG1022	Amp-dependent synthetase and ligase
VEJY3_RS01755	COG0028	Belongs to the TPP enzyme family
VEJY3_RS01760	COG0440	acetolactate synthase activity
VEJY3_RS01765	COG0469	pyruvate kinase activity
VEJY3_RS01770	COG1349	DNA-binding transcription factor activity
VEJY3_RS01775	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
VEJY3_RS01785	COG1263	PTS System
VEJY3_RS01785	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_RS01790	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
VEJY3_RS01795	COG3722	fumarate hydratase activity
VEJY3_RS01800	COG0246	Mannitol dehydrogenase
VEJY3_RS01805	COG2213	PTS system mannitol-specific
VEJY3_RS01805	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_RS01840	COG1464	Belongs to the NlpA lipoprotein family
VEJY3_RS01845	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_RS01860	COG0358	DNA primase activity
VEJY3_RS01865	COG1610	YqeY-like protein
VEJY3_RS01870	COG0828	Belongs to the bacterial ribosomal protein bS21 family
VEJY3_RS01875	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
VEJY3_RS01880	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
VEJY3_RS01885	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
VEJY3_RS01890	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
VEJY3_RS01895	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VEJY3_RS01900	COG1968	undecaprenyl-diphosphatase activity
VEJY3_RS01905	COG0617	tRNA 3'-terminal CCA addition
VEJY3_RS01910	COG3409	Peptidoglycan-binding domain 1 protein
VEJY3_RS01910	COG3267	Type II secretory pathway component ExeA
VEJY3_RS01920	COG4991	sh3 domain protein
VEJY3_RS01925	COG0306	phosphate transporter
VEJY3_RS01930	COG1392	Phosphate transport regulator
VEJY3_RS01935	COG3025	triphosphatase activity
VEJY3_RS01950	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
VEJY3_RS01960	COG1538	Outer membrane efflux protein
VEJY3_RS01965	COG0494	nUDIX hydrolase
VEJY3_RS01970	COG3151	Protein conserved in bacteria
VEJY3_RS01980	COG3150	esterase
VEJY3_RS01990	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
VEJY3_RS01995	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VEJY3_RS02005	COG3105	Protein conserved in bacteria
VEJY3_RS02010	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
VEJY3_RS02015	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
VEJY3_RS02020	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
VEJY3_RS02025	COG0723	plastoquinol--plastocyanin reductase activity
VEJY3_RS02030	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
VEJY3_RS02035	COG2857	Cytochrome c1
VEJY3_RS02040	COG0625	glutathione transferase activity
VEJY3_RS02045	COG2969	positive regulation of protein catabolic process
VEJY3_RS02050	COG2823	Periplasmic or secreted lipoprotein
VEJY3_RS02055	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VEJY3_RS02070	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
VEJY3_RS02075	COG0275	rRNA processing
VEJY3_RS02080	COG3116	cell division
VEJY3_RS02085	COG0768	penicillin binding
VEJY3_RS02090	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
VEJY3_RS02095	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
VEJY3_RS02100	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
VEJY3_RS02105	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
VEJY3_RS02110	COG0772	Belongs to the SEDS family
VEJY3_RS02115	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
VEJY3_RS02120	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VEJY3_RS02125	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
VEJY3_RS02130	COG0849	cell division
VEJY3_RS02135	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
VEJY3_RS02140	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
VEJY3_RS02150	COG0653	protein targeting
VEJY3_RS02155	COG0494	nUDIX hydrolase
VEJY3_RS02165	COG0505	Belongs to the CarA family
VEJY3_RS02170	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VEJY3_RS02175	COG0730	response to heat
VEJY3_RS02180	COG0583	DNA-binding transcription factor activity
VEJY3_RS02185	COG2860	membrane
VEJY3_RS02190	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
VEJY3_RS02200	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
VEJY3_RS02210	COG0493	'glutamate synthase
VEJY3_RS02215	COG0067	glutamate synthase
VEJY3_RS02215	COG0070	glutamate synthase
VEJY3_RS02215	COG0069	glutamate synthase activity
VEJY3_RS02225	COG0067	glutamate synthase
VEJY3_RS02225	COG0070	glutamate synthase
VEJY3_RS02225	COG0069	glutamate synthase activity
VEJY3_RS02230	COG1242	4 iron, 4 sulfur cluster binding
VEJY3_RS02235	COG0784	Response regulator, receiver
VEJY3_RS02235	COG2198	Histidine kinase
VEJY3_RS02235	COG5002	protein histidine kinase activity
VEJY3_RS02245	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS02255	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VEJY3_RS02270	COG0083	homoserine kinase activity
VEJY3_RS02275	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
VEJY3_RS02280	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
VEJY3_RS02285	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
VEJY3_RS02290	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
VEJY3_RS02305	COG1115	amino acid carrier protein
VEJY3_RS02310	COG3022	response to hydroperoxide
VEJY3_RS02315	COG0513	Belongs to the DEAD box helicase family
VEJY3_RS02320	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
VEJY3_RS02335	COG4974	Belongs to the 'phage' integrase family
VEJY3_RS02340	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VEJY3_RS02345	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
VEJY3_RS02350	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
VEJY3_RS02355	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
VEJY3_RS02360	COG3829	transcription factor binding
VEJY3_RS02360	COG3290	protein histidine kinase activity
VEJY3_RS02370	COG0667	Aldo Keto reductase
VEJY3_RS02380	COG3066	DNA modification
VEJY3_RS02395	COG0730	response to heat
VEJY3_RS02400	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
VEJY3_RS02405	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
VEJY3_RS02415	COG1283	sodium-dependent phosphate transmembrane transporter activity
VEJY3_RS02420	COG0583	DNA-binding transcription factor activity
VEJY3_RS02425	COG0640	Transcriptional regulator
VEJY3_RS02430	COG0268	Binds directly to 16S ribosomal RNA
VEJY3_RS02435	COG0728	peptidoglycan biosynthetic process
VEJY3_RS02440	COG0196	riboflavin kinase activity
VEJY3_RS02445	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
VEJY3_RS02450	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
VEJY3_RS02455	COG1047	Peptidyl-prolyl cis-trans
VEJY3_RS02460	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
VEJY3_RS02465	COG3279	Response regulator of the LytR AlgR family
VEJY3_RS02470	COG3275	phosphorelay sensor kinase activity
VEJY3_RS02475	COG1966	Carbon starvation protein
VEJY3_RS02495	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
VEJY3_RS02500	COG1472	Belongs to the glycosyl hydrolase 3 family
VEJY3_RS02505	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VEJY3_RS02510	COG1605	Chorismate mutase
VEJY3_RS02510	COG0287	Prephenate dehydrogenase
VEJY3_RS02515	COG0739	heme binding
VEJY3_RS02520	COG0488	(ABC) transporter
VEJY3_RS02530	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
VEJY3_RS02535	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
VEJY3_RS02540	COG0077	Prephenate dehydratase
VEJY3_RS02540	COG1605	Chorismate mutase
VEJY3_RS02545	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VEJY3_RS02550	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VEJY3_RS02555	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VEJY3_RS02560	COG0564	pseudouridine synthase activity
VEJY3_RS02570	COG0542	response to heat
VEJY3_RS02585	COG1116	anion transmembrane transporter activity
VEJY3_RS02640	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
VEJY3_RS02650	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VEJY3_RS02655	COG0826	peptidase U32
VEJY3_RS02670	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS02675	COG5002	protein histidine kinase activity
VEJY3_RS02685	COG0248	Ppx GppA phosphatase
VEJY3_RS02690	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
VEJY3_RS02700	COG0581	inorganic phosphate transmembrane transporter activity
VEJY3_RS02705	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
VEJY3_RS02710	COG0704	Plays a role in the regulation of phosphate uptake
VEJY3_RS02720	COG3142	Participates in the control of copper homeostasis
VEJY3_RS02725	COG0450	alkyl hydroperoxide reductase
VEJY3_RS02730	COG0583	DNA-binding transcription factor activity
VEJY3_RS02735	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
VEJY3_RS02745	COG0517	IMP dehydrogenase activity
VEJY3_RS02755	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
VEJY3_RS02760	COG0343	queuine tRNA-ribosyltransferase activity
VEJY3_RS02765	COG1862	Preprotein translocase
VEJY3_RS02770	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VEJY3_RS02775	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VEJY3_RS02780	COG0483	inositol monophosphate 1-phosphatase activity
VEJY3_RS02785	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
VEJY3_RS02795	COG1104	cysteine desulfurase activity
VEJY3_RS02800	COG0822	iron-sulfur transferase activity
VEJY3_RS02815	COG0443	Heat shock 70 kDa protein
VEJY3_RS02820	COG0633	Ferredoxin
VEJY3_RS02825	COG2975	iron-sulfur cluster assembly
VEJY3_RS02830	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VEJY3_RS02835	COG0105	UTP biosynthetic process
VEJY3_RS02850	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
VEJY3_RS02855	COG0124	histidyl-tRNA synthetase
VEJY3_RS02860	COG2976	Protein conserved in bacteria
VEJY3_RS02865	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VEJY3_RS02870	COG1160	GTP binding
VEJY3_RS02890	COG0516	GMP reductase activity
VEJY3_RS02890	COG0517	IMP dehydrogenase activity
VEJY3_RS02895	COG0519	Catalyzes the synthesis of GMP from XMP
VEJY3_RS02895	COG0518	GMP synthase (glutamine-hydrolyzing) activity
VEJY3_RS02900	COG1584	GPR1 FUN34 yaaH family protein
VEJY3_RS02915	COG1473	amidohydrolase
VEJY3_RS02925	COG1115	amino acid carrier protein
VEJY3_RS02930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_RS02940	COG2873	o-acetylhomoserine
VEJY3_RS02945	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VEJY3_RS02965	COG3153	acetyltransferase
VEJY3_RS02965	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VEJY3_RS02970	COG0583	DNA-binding transcription factor activity
VEJY3_RS02975	COG0235	Class ii aldolase
VEJY3_RS02980	COG4806	L-rhamnose isomerase
VEJY3_RS02985	COG1070	Carbohydrate kinase
VEJY3_RS02990	COG3254	rhamnose metabolic process
VEJY3_RS03030	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
VEJY3_RS03035	COG2867	negative regulation of translational initiation
VEJY3_RS03040	COG2914	Belongs to the UPF0125 (RnfH) family
VEJY3_RS03045	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VEJY3_RS03050	COG0497	DNA recombination
VEJY3_RS03055	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
VEJY3_RS03060	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
VEJY3_RS03065	COG1301	dicarboxylic acid transport
VEJY3_RS03075	COG0484	heat shock protein binding
VEJY3_RS03105	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VEJY3_RS03115	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VEJY3_RS03120	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
VEJY3_RS03120	COG0047	phosphoribosylformylglycinamidine synthase activity
VEJY3_RS03155	COG2195	Cleaves the N-terminal amino acid of tripeptides
VEJY3_RS03160	COG2252	PERMEase
VEJY3_RS03165	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
VEJY3_RS03170	COG1073	alpha beta
VEJY3_RS03180	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
VEJY3_RS03185	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
VEJY3_RS03190	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
VEJY3_RS03195	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VEJY3_RS03195	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VEJY3_RS03210	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
VEJY3_RS03220	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
VEJY3_RS03225	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
VEJY3_RS03235	COG0142	geranyltranstransferase activity
VEJY3_RS03245	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
VEJY3_RS03250	COG2885	chlorophyll binding
VEJY3_RS03255	COG0301	tRNA thio-modification
VEJY3_RS03255	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VEJY3_RS03260	COG0583	DNA-binding transcription factor activity
VEJY3_RS03270	COG2363	Small membrane protein
VEJY3_RS03280	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VEJY3_RS03285	COG1611	Belongs to the LOG family
VEJY3_RS03300	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
VEJY3_RS03300	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
VEJY3_RS03310	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
VEJY3_RS03315	COG1464	Belongs to the NlpA lipoprotein family
VEJY3_RS03320	COG2011	ABC-type metal ion transport system permease component
VEJY3_RS03325	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
VEJY3_RS03330	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VEJY3_RS03340	COG1263	PTS System
VEJY3_RS03340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_RS03345	COG0366	Alpha amylase catalytic
VEJY3_RS03355	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VEJY3_RS03360	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
VEJY3_RS03365	COG0321	lipoyl(octanoyl) transferase activity
VEJY3_RS03375	COG1686	Belongs to the peptidase S11 family
VEJY3_RS03380	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VEJY3_RS03385	COG0772	Belongs to the SEDS family
VEJY3_RS03390	COG0768	penicillin binding
VEJY3_RS03400	COG0799	negative regulation of ribosome biogenesis
VEJY3_RS03405	COG1466	dna polymerase III delta subunit
VEJY3_RS03410	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
VEJY3_RS03415	COG0495	leucyl-tRNA aminoacylation
VEJY3_RS03420	COG2888	peptidyl-tyrosine sulfation
VEJY3_RS03425	COG0815	Transfers the fatty acyl group on membrane lipoproteins
VEJY3_RS03430	COG4535	Mg2 and Co2 transporter CorC
VEJY3_RS03440	COG1702	phosphate starvation-inducible protein PhoH
VEJY3_RS03445	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
VEJY3_RS03450	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VEJY3_RS03545	COG0012	GTP binding
VEJY3_RS03555	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
VEJY3_RS03560	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
VEJY3_RS03565	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
VEJY3_RS03570	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
VEJY3_RS03580	COG2890	protein-(glutamine-N5) methyltransferase activity
VEJY3_RS03585	COG3094	Invasion gene expression up-regulator, SirB
VEJY3_RS03590	COG2912	Transglutaminase-like superfamily
VEJY3_RS03595	COG2877	3-deoxy-8-phosphooctulonate synthase activity
VEJY3_RS03600	COG0737	Belongs to the 5'-nucleotidase family
VEJY3_RS03605	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
VEJY3_RS03610	COG1187	pseudouridine synthase activity
VEJY3_RS03615	COG2840	Smr protein MutS2
VEJY3_RS03645	COG2217	Heavy metal translocating P-type atpase
VEJY3_RS03645	COG2608	mercury ion transmembrane transporter activity
VEJY3_RS03700	COG0835	chemotaxis
VEJY3_RS03700	COG0784	Response regulator, receiver
VEJY3_RS03705	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
VEJY3_RS03710	COG1815	bacterial-type flagellum-dependent cell motility
VEJY3_RS03715	COG1558	bacterial-type flagellum-dependent cell motility
VEJY3_RS03725	COG1749	Flagellar hook protein flgE
VEJY3_RS03730	COG4787	bacterial-type flagellum-dependent cell motility
VEJY3_RS03740	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
VEJY3_RS03745	COG1706	bacterial-type flagellum-dependent cell motility
VEJY3_RS03750	COG3951	Flagellar rod assembly protein muramidase FlgJ
VEJY3_RS03750	COG1705	Flagellar rod assembly protein muramidase FlgJ
VEJY3_RS03760	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_RS03765	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_RS03770	COG2190	(PTS) system
VEJY3_RS03775	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VEJY3_RS03780	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_RS03785	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
VEJY3_RS03790	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
VEJY3_RS03795	COG3115	cell septum assembly
VEJY3_RS03800	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
VEJY3_RS03820	COG0330	HflC and HflK could
VEJY3_RS03825	COG3118	belongs to the thioredoxin family
VEJY3_RS03830	COG0300	oxidoreductase activity
VEJY3_RS03835	COG1090	epimerase
VEJY3_RS03865	COG0622	Phosphoesterase
VEJY3_RS03885	COG3710	Transcriptional regulator
VEJY3_RS03890	COG0326	Molecular chaperone. Has ATPase activity
VEJY3_RS03900	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
VEJY3_RS03905	COG3104	oligopeptide transport
VEJY3_RS03910	COG0250	Participates in transcription elongation, termination and antitermination
VEJY3_RS03915	COG0367	asparagine synthase
VEJY3_RS03920	COG4651	solute:proton antiporter activity
VEJY3_RS03920	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VEJY3_RS03925	COG1846	Transcriptional regulator
VEJY3_RS03925	COG1940	carbohydrate kinase activity
VEJY3_RS03930	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VEJY3_RS03935	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_RS03935	COG1263	PTS System
VEJY3_RS03935	COG2190	(PTS) system
VEJY3_RS03940	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VEJY3_RS03945	COG0735	belongs to the Fur family
VEJY3_RS03965	COG0596	Alpha beta hydrolase
VEJY3_RS03970	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
VEJY3_RS03975	COG0033	Phosphoglucomutase
VEJY3_RS03985	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
VEJY3_RS04000	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
VEJY3_RS04005	COG1053	succinate dehydrogenase
VEJY3_RS04015	COG0567	Dehydrogenase, E1 component
VEJY3_RS04020	COG0508	dehydrogenase complex catalyzes the overall conversion of
VEJY3_RS04025	COG0045	succinate-CoA ligase (ADP-forming) activity
VEJY3_RS04035	COG1108	ABC-type Mn2 Zn2 transport systems permease components
VEJY3_RS04040	COG1121	(ABC) transporter
VEJY3_RS04045	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
VEJY3_RS04050	COG4977	sequence-specific DNA binding
VEJY3_RS04055	COG1918	ferrous iron import across plasma membrane
VEJY3_RS04075	COG0018	arginyl-trna synthetase
VEJY3_RS04080	COG3102	Protein conserved in bacteria
VEJY3_RS04095	COG0788	formyltetrahydrofolate deformylase activity
VEJY3_RS04100	COG1199	ATP-dependent helicase activity
VEJY3_RS04105	COG1214	PFAM Peptidase M22, glycoprotease
VEJY3_RS04120	COG2267	carboxylic ester hydrolase activity
VEJY3_RS04125	COG0318	PFAM AMP-dependent synthetase and ligase
VEJY3_RS04130	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
VEJY3_RS04135	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
VEJY3_RS04140	COG2894	cell division
VEJY3_RS04155	COG2951	lytic endotransglycosylase activity
VEJY3_RS04160	COG0583	DNA-binding transcription factor activity
VEJY3_RS04165	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VEJY3_RS04170	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
VEJY3_RS04235	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_RS04245	COG1169	isochorismate synthase
VEJY3_RS04250	COG1021	2,3-dihydroxybenzoate-AMP ligase
VEJY3_RS04255	COG1535	isochorismatase
VEJY3_RS04255	COG3433	isochorismatase activity
VEJY3_RS04260	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VEJY3_RS04260	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VEJY3_RS04275	COG4771	TonB-dependent receptor
VEJY3_RS04280	COG1253	flavin adenine dinucleotide binding
VEJY3_RS04285	COG0513	Belongs to the DEAD box helicase family
VEJY3_RS04290	COG0569	domain protein
VEJY3_RS04295	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VEJY3_RS04305	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
VEJY3_RS04325	COG1175	transmembrane transport
VEJY3_RS04330	COG0395	ABC-type sugar transport system, permease component
VEJY3_RS04335	COG3842	ATPase activity
VEJY3_RS04340	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VEJY3_RS04345	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VEJY3_RS04350	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VEJY3_RS04385	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
VEJY3_RS04390	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
VEJY3_RS04395	COG0776	regulation of translation
VEJY3_RS04400	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VEJY3_RS04405	COG1555	photosystem II stabilization
VEJY3_RS04420	COG0232	Belongs to the dGTPase family. Type 2 subfamily
VEJY3_RS04425	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
VEJY3_RS04430	COG0436	Aminotransferase
VEJY3_RS04435	COG1169	isochorismate synthase
VEJY3_RS04440	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
VEJY3_RS04445	COG0596	Alpha beta hydrolase
VEJY3_RS04450	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
VEJY3_RS04470	COG2855	membrane
VEJY3_RS04475	COG0477	Major facilitator Superfamily
VEJY3_RS04505	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_RS04510	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VEJY3_RS04525	COG1522	sequence-specific DNA binding
VEJY3_RS04530	COG1946	Acyl-CoA thioesterase
VEJY3_RS04535	COG3126	Type III secretion system lipoprotein chaperone (YscW)
VEJY3_RS04550	COG0583	DNA-binding transcription factor activity
VEJY3_RS04560	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_RS04565	COG0174	glutamine synthetase
VEJY3_RS04570	COG0174	glutamine synthetase
VEJY3_RS04580	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VEJY3_RS04585	COG3842	ATPase activity
VEJY3_RS04590	COG1176	ABC-type spermidine putrescine transport system, permease component I
VEJY3_RS04595	COG1177	transmembrane transport
VEJY3_RS04605	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS04610	COG0519	Catalyzes the synthesis of GMP from XMP
VEJY3_RS04615	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VEJY3_RS04620	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
VEJY3_RS04625	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
VEJY3_RS04630	COG0516	GMP reductase activity
VEJY3_RS04630	COG0517	IMP dehydrogenase activity
VEJY3_RS04655	COG0537	adenosine 5'-monophosphoramidase activity
VEJY3_RS04680	COG3150	esterase
VEJY3_RS04685	COG1252	NADH dehydrogenase
VEJY3_RS04700	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
VEJY3_RS04710	COG4591	ABC-type transport system involved in lipoprotein release permease component
VEJY3_RS04715	COG1136	(ABC) transporter
VEJY3_RS04720	COG4591	ABC-type transport system involved in lipoprotein release permease component
VEJY3_RS04730	COG2333	competence protein COMEC
VEJY3_RS04730	COG0658	competence protein
VEJY3_RS04735	COG1132	(ABC) transporter
VEJY3_RS04750	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
VEJY3_RS04755	COG2719	SpoVR family
VEJY3_RS04760	COG2718	Belongs to the UPF0229 family
VEJY3_RS04765	COG2766	serine protein kinase
VEJY3_RS04780	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VEJY3_RS04790	COG1882	Formate acetyltransferase
VEJY3_RS04825	COG0708	Exodeoxyribonuclease III
VEJY3_RS04835	COG0583	DNA-binding transcription factor activity
VEJY3_RS04845	COG1346	cytolysis
VEJY3_RS04855	COG3923	Primosomal replication protein n
VEJY3_RS04860	COG0730	response to heat
VEJY3_RS04865	COG1199	ATP-dependent helicase activity
VEJY3_RS04875	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VEJY3_RS04880	COG1187	pseudouridine synthase activity
VEJY3_RS04890	COG1278	Cold shock
VEJY3_RS04895	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
VEJY3_RS04900	COG0542	response to heat
VEJY3_RS04905	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
VEJY3_RS04910	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
VEJY3_RS04915	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
VEJY3_RS04925	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
VEJY3_RS04935	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VEJY3_RS04940	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VEJY3_RS04945	COG0297	glycogen (starch) synthase activity
VEJY3_RS04965	COG3070	regulator of competence-specific genes
VEJY3_RS04970	COG1609	Transcriptional regulator
VEJY3_RS04975	COG3381	protein complex oligomerization
VEJY3_RS04980	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS04985	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VEJY3_RS04990	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VEJY3_RS04995	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
VEJY3_RS05000	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
VEJY3_RS05005	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VEJY3_RS05035	COG4067	protein conserved in archaea
VEJY3_RS05035	COG0189	ligase activity
VEJY3_RS05040	COG0500	methyltransferase
VEJY3_RS05045	COG4106	trans-aconitate 2-methyltransferase activity
VEJY3_RS05050	COG1801	Protein of unknown function DUF72
VEJY3_RS05060	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
VEJY3_RS05065	COG0632	four-way junction helicase activity
VEJY3_RS05070	COG2255	four-way junction helicase activity
VEJY3_RS05075	COG1271	oxidase subunit
VEJY3_RS05080	COG1294	oxidase, subunit
VEJY3_RS05095	COG0824	Thioesterase
VEJY3_RS05100	COG0811	peptide transport
VEJY3_RS05115	COG0823	Involved in the tonB-independent uptake of proteins
VEJY3_RS05120	COG2885	chlorophyll binding
VEJY3_RS05125	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
VEJY3_RS05130	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
VEJY3_RS05140	COG3766	membrane
VEJY3_RS05150	COG0754	glutathionylspermidine amidase activity
VEJY3_RS05165	COG1858	cytochrome C peroxidase
VEJY3_RS05185	COG0784	Response regulator, receiver
VEJY3_RS05185	COG5002	protein histidine kinase activity
VEJY3_RS05200	COG0582	viral genome integration into host DNA
VEJY3_RS05320	COG0582	viral genome integration into host DNA
VEJY3_RS05350	COG0556	nucleotide-excision repair
VEJY3_RS05360	COG0419	ATPase involved in DNA repair
VEJY3_RS05410	COG1288	antiporter activity
VEJY3_RS05415	COG2988	succinylglutamate desuccinylase activity
VEJY3_RS05505	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
VEJY3_RS05510	COG1396	sequence-specific DNA binding
VEJY3_RS05515	COG3135	benzoate transporter
VEJY3_RS05520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_RS05525	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VEJY3_RS05560	COG0686	Belongs to the AlaDH PNT family
VEJY3_RS05570	COG1674	ftsk spoiiie
VEJY3_RS05575	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
VEJY3_RS05580	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
VEJY3_RS05590	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VEJY3_RS05595	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
VEJY3_RS05600	COG0156	8-amino-7-oxononanoate synthase activity
VEJY3_RS05610	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
VEJY3_RS05615	COG0501	Belongs to the peptidase M48B family
VEJY3_RS05625	COG4221	oxidoreductase activity
VEJY3_RS05640	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VEJY3_RS05660	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
VEJY3_RS05670	COG0482	sulfurtransferase activity
VEJY3_RS05680	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_RS05690	COG1757	Na H antiporter
VEJY3_RS05705	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
VEJY3_RS05710	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
VEJY3_RS05715	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VEJY3_RS05720	COG0131	Imidazoleglycerol-phosphate dehydratase
VEJY3_RS05720	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VEJY3_RS05725	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
VEJY3_RS05730	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
VEJY3_RS05735	COG0107	imidazoleglycerol-phosphate synthase activity
VEJY3_RS05740	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
VEJY3_RS05740	COG0140	phosphoribosyl-ATP diphosphatase activity
VEJY3_RS05745	COG3012	SEC-C Motif Domain Protein
VEJY3_RS05750	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VEJY3_RS05755	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VEJY3_RS05760	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VEJY3_RS05765	COG0215	cysteine-tRNA ligase activity
VEJY3_RS05770	COG1435	thymidine kinase activity
VEJY3_RS05775	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VEJY3_RS05790	COG2116	formate transmembrane transporter activity
VEJY3_RS05795	COG0390	transport system, permease component
VEJY3_RS05800	COG4459	periplasmic nitrate reductase
VEJY3_RS05805	COG3005	denitrification pathway
VEJY3_RS05810	COG0243	molybdopterin cofactor binding
VEJY3_RS05825	COG1227	inorganic diphosphatase activity
VEJY3_RS05835	COG4172	Belongs to the ABC transporter superfamily
VEJY3_RS05860	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
VEJY3_RS05865	COG1842	Phage shock protein A
VEJY3_RS05875	COG1983	PspC domain protein
VEJY3_RS05895	COG2818	Glycosylase
VEJY3_RS05900	COG0626	cystathionine gamma-synthase activity
VEJY3_RS05910	COG0733	neurotransmitter:sodium symporter activity
VEJY3_RS05915	COG0564	pseudouridine synthase activity
VEJY3_RS05925	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VEJY3_RS05930	COG1151	hydroxylamine reductase activity
VEJY3_RS05935	COG3604	Transcriptional regulator
VEJY3_RS05945	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
VEJY3_RS05950	COG4136	ATPase activity
VEJY3_RS05955	COG4135	transport system, permease component
VEJY3_RS05960	COG4134	Bacterial extracellular solute-binding protein
VEJY3_RS05970	COG3313	Fe-S protein
VEJY3_RS05985	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
VEJY3_RS05990	COG2205	protein histidine kinase activity
VEJY3_RS05995	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS06005	COG1061	Type III restriction enzyme res subunit
VEJY3_RS06010	COG1187	pseudouridine synthase activity
VEJY3_RS06020	COG2814	Major facilitator Superfamily
VEJY3_RS06050	COG3005	denitrification pathway
VEJY3_RS06055	COG0702	epimerase
VEJY3_RS06060	COG0534	Mate efflux family protein
VEJY3_RS06065	COG4181	ATPase activity
VEJY3_RS06080	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VEJY3_RS06090	COG1960	acyl-CoA dehydrogenase activity
VEJY3_RS06095	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VEJY3_RS06100	COG2985	domain, Protein
VEJY3_RS06100	COG3273	potassium ion transport
VEJY3_RS06105	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VEJY3_RS06110	COG1454	alcohol dehydrogenase
VEJY3_RS06110	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS06115	COG1737	Transcriptional regulator
VEJY3_RS06120	COG0076	glutamate decarboxylase activity
VEJY3_RS06130	COG2431	L-lysine efflux transmembrane transporter activity
VEJY3_RS06140	COG3070	regulator of competence-specific genes
VEJY3_RS06155	COG4191	Histidine kinase
VEJY3_RS06155	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_RS06165	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
VEJY3_RS06175	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
VEJY3_RS06180	COG4988	ABC transporter
VEJY3_RS06185	COG0492	ferredoxin-NADP+ reductase activity
VEJY3_RS06205	COG0471	metal ion transport
VEJY3_RS06210	COG2949	membrane
VEJY3_RS06215	COG0281	malic enzyme
VEJY3_RS06220	COG1643	Atp-dependent helicase
VEJY3_RS06235	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
VEJY3_RS06270	COG0277	FAD linked oxidase domain protein
VEJY3_RS06270	COG0247	lactate metabolic process
VEJY3_RS06275	COG2020	methyltransferase activity
VEJY3_RS06280	COG0583	DNA-binding transcription factor activity
VEJY3_RS06285	COG3384	dioxygenase
VEJY3_RS06290	COG0435	Glutathione S-transferase
VEJY3_RS06300	COG0010	Belongs to the arginase family
VEJY3_RS06305	COG1228	amidohydrolase
VEJY3_RS06325	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
VEJY3_RS06335	COG0291	Belongs to the bacterial ribosomal protein bL35 family
VEJY3_RS06350	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
VEJY3_RS06355	COG0072	phenylalanine-tRNA ligase activity
VEJY3_RS06355	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VEJY3_RS06360	COG1621	beta-fructofuranosidase activity
VEJY3_RS06365	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_RS06385	COG0776	regulation of translation
VEJY3_RS06395	COG0500	methyltransferase
VEJY3_RS06400	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
VEJY3_RS06405	COG0295	cytidine deaminase activity
VEJY3_RS06410	COG1346	cytolysis
VEJY3_RS06415	COG1380	Effector of murein hydrolase LrgA
VEJY3_RS06420	COG2925	Exonuclease
VEJY3_RS06440	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
VEJY3_RS06455	COG2226	methyltransferase
VEJY3_RS06470	COG1823	symporter activity
VEJY3_RS06475	COG0702	epimerase
VEJY3_RS06480	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
VEJY3_RS06490	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
VEJY3_RS06510	COG2988	succinylglutamate desuccinylase activity
VEJY3_RS06515	COG4139	cobalamin transport
VEJY3_RS06540	COG0583	DNA-binding transcription factor activity
VEJY3_RS06550	COG1451	nucleotide metabolic process
VEJY3_RS06610	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
VEJY3_RS06615	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VEJY3_RS06630	COG2195	Cleaves the N-terminal amino acid of tripeptides
VEJY3_RS06640	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
VEJY3_RS06650	COG0625	glutathione transferase activity
VEJY3_RS06675	COG4145	pantothenate transmembrane transporter activity
VEJY3_RS06680	COG3924	membrane
VEJY3_RS06700	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VEJY3_RS06710	COG1349	DNA-binding transcription factor activity
VEJY3_RS06730	COG0579	oxidoreductase
VEJY3_RS06760	COG4638	Rieske (2fe-2S)
VEJY3_RS06765	COG0583	DNA-binding transcription factor activity
VEJY3_RS06770	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VEJY3_RS06885	COG1953	Uracil, thiamine, allantoin
VEJY3_RS06900	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VEJY3_RS06915	COG2059	Chromate
VEJY3_RS06920	COG2059	Chromate
VEJY3_RS06950	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
VEJY3_RS06960	COG1414	Transcriptional regulator
VEJY3_RS06970	COG0400	carboxylic ester hydrolase activity
VEJY3_RS06980	COG5002	protein histidine kinase activity
VEJY3_RS06980	COG2198	Histidine kinase
VEJY3_RS06980	COG0784	Response regulator, receiver
VEJY3_RS06990	COG0559	Belongs to the binding-protein-dependent transport system permease family
VEJY3_RS07010	COG0829	nickel cation binding
VEJY3_RS07015	COG0831	urea catabolic process
VEJY3_RS07020	COG0832	Belongs to the urease beta subunit family
VEJY3_RS07025	COG0804	urea catabolic process
VEJY3_RS07035	COG0830	nickel cation binding
VEJY3_RS07040	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
VEJY3_RS07050	COG0471	metal ion transport
VEJY3_RS07055	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_RS07055	COG4191	Histidine kinase
VEJY3_RS07075	COG0814	amino acid
VEJY3_RS07095	COG1132	(ABC) transporter
VEJY3_RS07100	COG1132	(ABC) transporter
VEJY3_RS07110	COG0473	3-isopropylmalate dehydrogenase activity
VEJY3_RS07115	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VEJY3_RS07120	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS07145	COG0443	Heat shock 70 kDa protein
VEJY3_RS07150	COG0443	Heat shock 70 kDa protein
VEJY3_RS07185	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
VEJY3_RS07190	COG1643	Atp-dependent helicase
VEJY3_RS07205	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VEJY3_RS07215	COG1793	dna ligase
VEJY3_RS07225	COG0534	Mate efflux family protein
VEJY3_RS07230	COG0307	riboflavin synthase, alpha
VEJY3_RS07240	COG3001	Fructosamine kinase
VEJY3_RS07245	COG2201	protein-glutamate methylesterase activity
VEJY3_RS07250	COG3706	GGDEF domain
VEJY3_RS07260	COG0791	NLP P60 protein
VEJY3_RS07265	COG0840	transmembrane signaling receptor activity
VEJY3_RS07280	COG3148	PFAM DTW domain containing protein
VEJY3_RS07285	COG1940	carbohydrate kinase activity
VEJY3_RS07300	COG0303	'Molybdopterin
VEJY3_RS07310	COG3842	ATPase activity
VEJY3_RS07325	COG2204	response regulator
VEJY3_RS07330	COG4191	Histidine kinase
VEJY3_RS07335	COG0488	(ABC) transporter
VEJY3_RS07345	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
VEJY3_RS07375	COG0243	molybdopterin cofactor binding
VEJY3_RS07375	COG3383	formate dehydrogenase (NAD+) activity
VEJY3_RS07380	COG0437	4 iron, 4 sulfur cluster binding
VEJY3_RS07395	COG0110	maltose O-acetyltransferase activity
VEJY3_RS07400	COG2207	Transcriptional regulator
VEJY3_RS07405	COG0534	Mate efflux family protein
VEJY3_RS07410	COG0004	ammonium transporteR
VEJY3_RS07415	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
VEJY3_RS07420	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VEJY3_RS07430	COG1177	transmembrane transport
VEJY3_RS07440	COG3842	ATPase activity
VEJY3_RS07455	COG0037	tRNA processing
VEJY3_RS07460	COG0589	response to stress
VEJY3_RS07465	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VEJY3_RS07480	COG2217	Heavy metal translocating P-type atpase
VEJY3_RS07490	COG2010	Cytochrome c
VEJY3_RS07505	COG3278	Belongs to the heme-copper respiratory oxidase family
VEJY3_RS07520	COG2205	protein histidine kinase activity
VEJY3_RS07520	COG0784	Response regulator, receiver
VEJY3_RS07680	COG3120	sequence-specific DNA binding
VEJY3_RS07685	COG1067	ATP-dependent peptidase activity
VEJY3_RS07690	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VEJY3_RS07705	COG0488	(ABC) transporter
VEJY3_RS07715	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VEJY3_RS07715	COG0116	Belongs to the methyltransferase superfamily
VEJY3_RS07725	COG0167	dihydroorotate dehydrogenase activity
VEJY3_RS07730	COG2902	Dehydrogenase
VEJY3_RS07735	COG0308	aminopeptidase N
VEJY3_RS07750	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
VEJY3_RS07755	COG1956	GAF domain-containing protein
VEJY3_RS07760	COG1132	(ABC) transporter
VEJY3_RS07765	COG2995	paraquat-inducible protein a
VEJY3_RS07770	COG3008	intermembrane lipid transfer
VEJY3_RS07775	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
VEJY3_RS07775	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VEJY3_RS07795	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VEJY3_RS07800	COG1666	GTP binding
VEJY3_RS07815	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_RS07820	COG4597	amino acid ABC transporter
VEJY3_RS07825	COG0765	amino acid transport
VEJY3_RS07830	COG1126	abc transporter atp-binding protein
VEJY3_RS07835	COG0670	Belongs to the BI1 family
VEJY3_RS07845	COG2920	part of a sulfur-relay system
VEJY3_RS07850	COG1254	Belongs to the acylphosphatase family
VEJY3_RS07855	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VEJY3_RS07870	COG2885	chlorophyll binding
VEJY3_RS07880	COG3706	GGDEF domain
VEJY3_RS07890	COG0602	queuosine metabolic process
VEJY3_RS07895	COG0561	phosphatase activity
VEJY3_RS07905	COG0110	maltose O-acetyltransferase activity
VEJY3_RS07930	COG5001	Diguanylate cyclase
VEJY3_RS07950	COG1051	belongs to the nudix hydrolase family
VEJY3_RS07965	COG2828	Protein conserved in bacteria
VEJY3_RS07975	COG0372	Belongs to the citrate synthase family
VEJY3_RS07980	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
VEJY3_RS08010	COG0730	response to heat
VEJY3_RS08015	COG2358	TRAP transporter, solute receptor (TAXI family
VEJY3_RS08020	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS08025	COG3284	Transcriptional regulator
VEJY3_RS08035	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
VEJY3_RS08040	COG0363	glucosamine-6-phosphate deaminase activity
VEJY3_RS08045	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
VEJY3_RS08055	COG4774	siderophore transport
VEJY3_RS08060	COG4565	transcriptional regulatory protein
VEJY3_RS08065	COG3290	protein histidine kinase activity
VEJY3_RS08080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_RS08095	COG0527	aspartate kinase activity
VEJY3_RS08105	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VEJY3_RS08110	COG0456	acetyltransferase
VEJY3_RS08120	COG4176	ABC-type proline glycine betaine transport system permease component
VEJY3_RS08125	COG2113	Glycine betaine
VEJY3_RS08145	COG4221	oxidoreductase activity
VEJY3_RS08155	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS08160	COG0642	Histidine kinase
VEJY3_RS08165	COG1368	sulfuric ester hydrolase activity
VEJY3_RS08185	COG1404	Belongs to the peptidase S8 family
VEJY3_RS08240	COG0463	Glycosyl transferase, family 2
VEJY3_RS08270	COG1115	amino acid carrier protein
VEJY3_RS08285	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
VEJY3_RS08290	COG1280	lysine exporter protein (LysE YggA)
VEJY3_RS08295	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
VEJY3_RS08300	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
VEJY3_RS08320	COG1560	Kdo2-lipid A biosynthetic process
VEJY3_RS08330	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
VEJY3_RS08335	COG3063	Type IV pilus biogenesis stability protein PilW
VEJY3_RS08365	COG2315	Protein conserved in bacteria
VEJY3_RS08370	COG1846	Transcriptional regulator
VEJY3_RS08375	COG0697	spore germination
VEJY3_RS08380	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VEJY3_RS08385	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS08390	COG2957	Belongs to the agmatine deiminase family
VEJY3_RS08400	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_RS08405	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS08410	COG1917	Cupin 2, conserved barrel domain protein
VEJY3_RS08410	COG1396	sequence-specific DNA binding
VEJY3_RS08415	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
VEJY3_RS08420	COG0174	glutamine synthetase
VEJY3_RS08425	COG1757	Na H antiporter
VEJY3_RS08445	COG2824	Alkylphosphonate utilization operon protein PhnA
VEJY3_RS08450	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VEJY3_RS08480	COG0346	lactoylglutathione lyase activity
VEJY3_RS08510	COG1794	racemase activity, acting on amino acids and derivatives
VEJY3_RS08530	COG0724	RNA recognition motif
VEJY3_RS08540	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VEJY3_RS08545	COG1882	Formate acetyltransferase
VEJY3_RS08575	COG4656	Part of a membrane complex involved in electron transport
VEJY3_RS08580	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VEJY3_RS08600	COG4820	ethanolamine utilization protein (EutJ)
VEJY3_RS08605	COG4869	propanediol catabolic process
VEJY3_RS08630	COG2207	Transcriptional regulator
VEJY3_RS08635	COG2972	Histidine kinase
VEJY3_RS08655	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS08660	COG5002	protein histidine kinase activity
VEJY3_RS08660	COG5000	phosphorelay sensor kinase activity
VEJY3_RS08685	COG1454	alcohol dehydrogenase
VEJY3_RS08690	COG2610	gluconate transmembrane transporter activity
VEJY3_RS08700	COG3718	enzyme involved in inositol metabolism
VEJY3_RS08705	COG0673	inositol 2-dehydrogenase activity
VEJY3_RS08710	COG2814	Major facilitator Superfamily
VEJY3_RS08710	COG0477	Major facilitator Superfamily
VEJY3_RS08715	COG1082	Xylose isomerase domain protein TIM barrel
VEJY3_RS08725	COG1082	Xylose isomerase domain protein TIM barrel
VEJY3_RS08735	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS08735	COG1454	alcohol dehydrogenase
VEJY3_RS08740	COG3962	Belongs to the TPP enzyme family
VEJY3_RS08745	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_RS08760	COG2999	glutathione oxidoreductase activity
VEJY3_RS08785	COG2814	Major facilitator Superfamily
VEJY3_RS08785	COG0477	Major facilitator Superfamily
VEJY3_RS08790	COG0673	inositol 2-dehydrogenase activity
VEJY3_RS08795	COG1082	Xylose isomerase domain protein TIM barrel
VEJY3_RS08815	COG2885	chlorophyll binding
VEJY3_RS08815	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
VEJY3_RS08835	COG2205	protein histidine kinase activity
VEJY3_RS08835	COG3437	response regulator, receiver
VEJY3_RS08835	COG3850	Histidine kinase
VEJY3_RS08835	COG4999	Histidine kinase
VEJY3_RS08880	COG0489	protein tyrosine kinase activity
VEJY3_RS08880	COG3206	protein involved in exopolysaccharide biosynthesis
VEJY3_RS08885	COG0297	glycogen (starch) synthase activity
VEJY3_RS08895	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VEJY3_RS08910	COG5492	domain, Protein
VEJY3_RS08995	COG0371	Dehydrogenase
VEJY3_RS09005	COG1105	Belongs to the carbohydrate kinase PfkB family
VEJY3_RS09010	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
VEJY3_RS09010	COG0517	IMP dehydrogenase activity
VEJY3_RS09015	COG4702	Belongs to the UPF0303 family
VEJY3_RS09020	COG0673	inositol 2-dehydrogenase activity
VEJY3_RS09025	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_RS09025	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VEJY3_RS09025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_RS09030	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_RS09035	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_RS09040	COG1882	Formate acetyltransferase
VEJY3_RS09045	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VEJY3_RS09055	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
VEJY3_RS09060	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_RS09065	COG2207	Transcriptional regulator
VEJY3_RS09105	COG0604	alcohol dehydrogenase
VEJY3_RS09110	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_RS09115	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_RS09130	COG0656	L-ascorbic acid biosynthetic process
VEJY3_RS09135	COG0583	DNA-binding transcription factor activity
VEJY3_RS09140	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
VEJY3_RS09145	COG0583	DNA-binding transcription factor activity
VEJY3_RS09150	COG2814	Major facilitator Superfamily
VEJY3_RS09160	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
VEJY3_RS09165	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VEJY3_RS09175	COG2188	Transcriptional regulator
VEJY3_RS09180	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_RS09180	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_RS09180	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_RS09185	COG0383	alpha-mannosidase activity
VEJY3_RS09190	COG1929	Belongs to the glycerate kinase type-1 family
VEJY3_RS09200	COG1609	Transcriptional regulator
VEJY3_RS09210	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_RS09230	COG4580	involved in the transport of maltose and maltodextrins
VEJY3_RS09240	COG3250	beta-galactosidase activity
VEJY3_RS09255	COG2814	Major facilitator Superfamily
VEJY3_RS09290	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS09295	COG2186	Transcriptional regulator
VEJY3_RS09310	COG1175	transmembrane transport
VEJY3_RS09315	COG0395	ABC-type sugar transport system, permease component
VEJY3_RS09335	COG2801	Transposase and inactivated derivatives
VEJY3_RS09350	COG0148	phosphopyruvate hydratase activity
VEJY3_RS09370	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_RS09380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_RS09395	COG0534	Mate efflux family protein
VEJY3_RS09420	COG4948	Mandelate Racemase Muconate Lactonizing
VEJY3_RS09425	COG0800	Aldolase
VEJY3_RS09435	COG0246	Mannitol dehydrogenase
VEJY3_RS09440	COG1063	alcohol dehydrogenase
VEJY3_RS09445	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
VEJY3_RS09450	COG0840	transmembrane signaling receptor activity
VEJY3_RS09460	COG2731	YhcH YjgK YiaL family protein
VEJY3_RS09465	COG2186	Transcriptional regulator
VEJY3_RS09495	COG1609	Transcriptional regulator
VEJY3_RS09500	COG2017	converts alpha-aldose to the beta-anomer
VEJY3_RS09515	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VEJY3_RS09530	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VEJY3_RS09575	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_RS09585	COG1609	Transcriptional regulator
VEJY3_RS09790	COG4220	transposase activity
VEJY3_RS09840	COG1403	HNH endonuclease
VEJY3_RS09865	COG1802	Transcriptional regulator
VEJY3_RS09865	COG4626	Terminase
VEJY3_RS09895	COG5532	Uncharacterized conserved protein (DUF2303)
VEJY3_RS09935	COG0582	viral genome integration into host DNA
VEJY3_RS09955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VEJY3_RS09965	COG3768	UPF0283 membrane protein
VEJY3_RS09970	COG3106	COG3106 Predicted ATPase
VEJY3_RS09985	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VEJY3_RS09995	COG0814	amino acid
VEJY3_RS10000	COG1760	l-serine dehydratase
VEJY3_RS10005	COG0720	synthase
VEJY3_RS10010	COG0017	Asparaginyl-tRNA synthetase
VEJY3_RS10020	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VEJY3_RS10035	COG1448	Aminotransferase
VEJY3_RS10050	COG2176	DNA-directed DNA polymerase activity
VEJY3_RS10060	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VEJY3_RS10065	COG1846	Transcriptional regulator
VEJY3_RS10090	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VEJY3_RS10105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VEJY3_RS10110	COG3108	Peptidase M15
VEJY3_RS10115	COG2989	Protein conserved in bacteria
VEJY3_RS10140	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VEJY3_RS10155	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VEJY3_RS10160	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VEJY3_RS10175	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VEJY3_RS10205	COG0019	diaminopimelate decarboxylase activity
VEJY3_RS10245	COG0322	excinuclease ABC activity
VEJY3_RS10250	COG2197	response regulator
VEJY3_RS10255	COG0417	DNA replication proofreading
VEJY3_RS10265	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VEJY3_RS10270	COG3099	Belongs to the UPF0263 family
VEJY3_RS10275	COG1187	pseudouridine synthase activity
VEJY3_RS10285	COG0009	L-threonylcarbamoyladenylate synthase
VEJY3_RS10290	COG0613	PHP domain protein
VEJY3_RS10300	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VEJY3_RS10305	COG0512	Glutamine amidotransferase of anthranilate synthase
VEJY3_RS10310	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
VEJY3_RS10315	COG0135	phosphoribosylanthranilate isomerase activity
VEJY3_RS10315	COG0134	indole-3-glycerol-phosphate synthase activity
VEJY3_RS10320	COG0133	tryptophan synthase activity
VEJY3_RS10325	COG0159	tryptophan synthase activity
VEJY3_RS10330	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VEJY3_RS10335	COG0318	PFAM AMP-dependent synthetase and ligase
VEJY3_RS10340	COG1301	dicarboxylic acid transport
VEJY3_RS10370	COG2350	Protein conserved in bacteria
VEJY3_RS10380	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
VEJY3_RS10385	COG0583	DNA-binding transcription factor activity
VEJY3_RS10400	COG5001	Diguanylate cyclase
VEJY3_RS10405	COG1032	radical SAM domain protein
VEJY3_RS10410	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS10415	COG3850	Histidine kinase
VEJY3_RS10415	COG5002	protein histidine kinase activity
VEJY3_RS10450	COG3118	belongs to the thioredoxin family
VEJY3_RS10455	COG4232	protein-disulfide reductase activity
VEJY3_RS10465	COG0189	ligase activity
VEJY3_RS10470	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
VEJY3_RS10480	COG2308	Evidence 4 Homologs of previously reported genes of
VEJY3_RS10495	COG2307	Protein conserved in bacteria
VEJY3_RS10495	COG2308	Evidence 4 Homologs of previously reported genes of
VEJY3_RS10530	COG2863	cytochrome
VEJY3_RS10535	COG3258	Cytochrome c
VEJY3_RS10540	COG2995	paraquat-inducible protein a
VEJY3_RS10545	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VEJY3_RS10545	COG3008	intermembrane lipid transfer
VEJY3_RS10550	COG3009	Protein conserved in bacteria
VEJY3_RS10555	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
VEJY3_RS10565	COG0463	Glycosyl transferase, family 2
VEJY3_RS10580	COG4166	transmembrane transport
VEJY3_RS10590	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
VEJY3_RS10595	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
VEJY3_RS10605	COG0539	negative regulation of cytoplasmic translation
VEJY3_RS10610	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
VEJY3_RS10615	COG0616	signal peptide processing
VEJY3_RS10620	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_RS10635	COG0587	DNA-directed DNA polymerase activity
VEJY3_RS10640	COG1940	carbohydrate kinase activity
VEJY3_RS10645	COG0469	pyruvate kinase activity
VEJY3_RS10650	COG4667	esterase of the alpha-beta hydrolase superfamily
VEJY3_RS10665	COG0733	neurotransmitter:sodium symporter activity
VEJY3_RS10675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_RS10675	COG1263	PTS System
VEJY3_RS10685	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_RS10685	COG2190	(PTS) system
VEJY3_RS10685	COG1263	PTS System
VEJY3_RS10690	COG0084	hydrolase, TatD family'
VEJY3_RS10695	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
VEJY3_RS10700	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
VEJY3_RS10705	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
VEJY3_RS10735	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VEJY3_RS10740	COG0416	fatty acid biosynthetic process
VEJY3_RS10750	COG1399	metal-binding, possibly nucleic acid-binding protein
VEJY3_RS10755	COG0424	maF-like protein
VEJY3_RS10760	COG0564	pseudouridine synthase activity
VEJY3_RS10765	COG1530	ribonuclease E activity
VEJY3_RS10770	COG0659	secondary active sulfate transmembrane transporter activity
VEJY3_RS10775	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
VEJY3_RS10780	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
VEJY3_RS10790	COG0572	uridine kinase
VEJY3_RS10795	COG0489	protein tyrosine kinase activity
VEJY3_RS10800	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VEJY3_RS10800	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VEJY3_RS10810	COG2186	Transcriptional regulator
VEJY3_RS10815	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VEJY3_RS10820	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
VEJY3_RS10825	COG0653	protein targeting
VEJY3_RS10830	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VEJY3_RS10835	COG2199	diguanylate cyclase activity
VEJY3_RS10840	COG0366	Alpha amylase catalytic
VEJY3_RS10845	COG1122	ATPase activity
VEJY3_RS10850	COG4120	Belongs to the binding-protein-dependent transport system permease family
VEJY3_RS10860	COG3092	negative regulation of chromosome organization
VEJY3_RS10865	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VEJY3_RS10870	COG0857	belongs to the CobB CobQ family
VEJY3_RS10870	COG0280	phosphate acetyltransferase
VEJY3_RS10875	COG3174	membrane
VEJY3_RS10880	COG0435	Glutathione S-transferase
VEJY3_RS10890	COG0444	Belongs to the ABC transporter superfamily
VEJY3_RS10895	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VEJY3_RS10900	COG0601	transmembrane transport
VEJY3_RS10910	COG0314	molybdopterin synthase activity
VEJY3_RS10915	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
VEJY3_RS10920	COG0315	cyclic pyranopterin monophosphate synthase activity
VEJY3_RS10925	COG0521	Mo-molybdopterin cofactor biosynthetic process
VEJY3_RS10930	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
VEJY3_RS10935	COG0391	Required for morphogenesis under gluconeogenic growth conditions
VEJY3_RS10940	COG2198	Histidine kinase
VEJY3_RS10945	COG2204	response regulator
VEJY3_RS10950	COG0556	nucleotide-excision repair
VEJY3_RS10960	COG4657	Part of a membrane complex involved in electron transport
VEJY3_RS10965	COG2878	Part of a membrane complex involved in electron transport
VEJY3_RS10970	COG4656	Part of a membrane complex involved in electron transport
VEJY3_RS10975	COG4658	electron transport chain
VEJY3_RS10980	COG4659	FMN binding
VEJY3_RS10985	COG4660	Part of a membrane complex involved in electron transport
VEJY3_RS10990	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
VEJY3_RS10995	COG0346	lactoylglutathione lyase activity
VEJY3_RS11005	COG2885	chlorophyll binding
VEJY3_RS11010	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
VEJY3_RS11015	COG2056	Na+-H+ antiporter family
VEJY3_RS11025	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
VEJY3_RS11040	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_RS11045	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS11045	COG1454	alcohol dehydrogenase
VEJY3_RS11050	COG2095	MarC family integral membrane protein
VEJY3_RS11055	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VEJY3_RS11060	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VEJY3_RS11065	COG1757	Na H antiporter
VEJY3_RS11080	COG3081	Nucleoid-associated protein
VEJY3_RS11085	COG3082	Protein of unknown function (DUF1414)
VEJY3_RS11100	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
VEJY3_RS11110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VEJY3_RS11115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VEJY3_RS11120	COG1120	ATPase activity
VEJY3_RS11125	COG1522	sequence-specific DNA binding
VEJY3_RS11130	COG0626	cystathionine gamma-synthase activity
VEJY3_RS11135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_RS11140	COG0765	amino acid transport
VEJY3_RS11150	COG0123	including yeast histone deacetylase and acetoin utilization protein
VEJY3_RS11160	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VEJY3_RS11165	COG0778	Nitroreductase
VEJY3_RS11170	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_RS11170	COG0446	pyridine nucleotide-disulphide oxidoreductase
VEJY3_RS11175	COG0616	signal peptide processing
VEJY3_RS11180	COG0252	asparaginase activity
VEJY3_RS11185	COG3139	Protein of unknown function (DUF1315)
VEJY3_RS11195	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VEJY3_RS11200	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VEJY3_RS11210	COG2226	methyltransferase
VEJY3_RS11225	COG1785	Belongs to the alkaline phosphatase family
VEJY3_RS11230	COG0668	transmembrane transport
VEJY3_RS11240	COG2261	transglycosylase associated protein
VEJY3_RS11250	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
VEJY3_RS11255	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
VEJY3_RS11270	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
VEJY3_RS11275	COG2832	Protein of unknown function (DUF454)
VEJY3_RS11285	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS11290	COG0583	DNA-binding transcription factor activity
VEJY3_RS11295	COG5492	domain, Protein
VEJY3_RS11300	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
VEJY3_RS11305	COG1286	toxin biosynthetic process
VEJY3_RS11310	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
VEJY3_RS11315	COG0285	dihydrofolate synthase activity
VEJY3_RS11320	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
VEJY3_RS11325	COG0101	tRNA pseudouridine synthase activity
VEJY3_RS11335	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VEJY3_RS11340	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VEJY3_RS11345	COG0747	negative chemotaxis
VEJY3_RS11350	COG1349	DNA-binding transcription factor activity
VEJY3_RS11360	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VEJY3_RS11370	COG0431	NADPH-dependent FMN reductase
VEJY3_RS11380	COG3101	peptidyl-lysine hydroxylation
VEJY3_RS11385	COG2860	membrane
VEJY3_RS11390	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
VEJY3_RS11395	COG2890	protein-(glutamine-N5) methyltransferase activity
VEJY3_RS11400	COG2840	Smr protein MutS2
VEJY3_RS11405	COG2062	phosphohistidine phosphatase, SixA
VEJY3_RS11420	COG1024	Enoyl-CoA hydratase
VEJY3_RS11420	COG1250	3-hydroxyacyl-CoA dehydrogenase
VEJY3_RS11425	COG0183	Belongs to the thiolase family
VEJY3_RS11445	COG2067	long-chain fatty acid transport protein
VEJY3_RS11465	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VEJY3_RS11470	COG1138	Cytochrome C-type biogenesis protein
VEJY3_RS11475	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
VEJY3_RS11480	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VEJY3_RS11485	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VEJY3_RS11490	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VEJY3_RS11495	COG4133	protoheme IX ABC transporter activity
VEJY3_RS11505	COG0835	chemotaxis
VEJY3_RS11515	COG1192	Involved in chromosome partitioning
VEJY3_RS11520	COG2201	protein-glutamate methylesterase activity
VEJY3_RS11525	COG0784	Response regulator, receiver
VEJY3_RS11525	COG0643	Histidine kinase
VEJY3_RS11525	COG2198	Histidine kinase
VEJY3_RS11530	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
VEJY3_RS11570	COG1987	bacterial-type flagellum assembly
VEJY3_RS11620	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
VEJY3_RS11630	COG1677	Flagellar hook-basal body complex protein FliE
VEJY3_RS11655	COG1516	flagellar protein fliS
VEJY3_RS11665	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
VEJY3_RS11670	COG1334	flagellar protein FlaG
VEJY3_RS11675	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_RS11680	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_RS11685	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_RS11690	COG2837	iron assimilation
VEJY3_RS11715	COG1393	Belongs to the ArsC family
VEJY3_RS11720	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
VEJY3_RS11735	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
VEJY3_RS11740	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VEJY3_RS11745	COG2716	regulation of RNA biosynthetic process
VEJY3_RS11750	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VEJY3_RS11780	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VEJY3_RS11795	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
VEJY3_RS11825	COG0732	type I restriction modification DNA specificity domain
VEJY3_RS11830	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
VEJY3_RS11860	COG2197	response regulator
VEJY3_RS11905	COG4783	chaperone-mediated protein folding
VEJY3_RS11910	COG1393	Belongs to the ArsC family
VEJY3_RS11930	COG2233	PERMEase
VEJY3_RS11935	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
VEJY3_RS11940	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
VEJY3_RS11945	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
VEJY3_RS11950	COG0121	glutamine amidotransferase
VEJY3_RS11955	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VEJY3_RS11960	COG1960	acyl-CoA dehydrogenase activity
VEJY3_RS11980	COG0328	RNA-DNA hybrid ribonuclease activity
VEJY3_RS11985	COG2226	methyltransferase
VEJY3_RS11990	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VEJY3_RS11995	COG0741	lytic transglycosylase activity
VEJY3_RS11995	COG1388	LysM domain
VEJY3_RS12005	COG3021	interspecies interaction between organisms
VEJY3_RS12010	COG0347	Belongs to the P(II) protein family
VEJY3_RS12020	COG0037	tRNA processing
VEJY3_RS12025	COG0825	malonyl-CoA metabolic process
VEJY3_RS12030	COG0587	DNA-directed DNA polymerase activity
VEJY3_RS12040	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VEJY3_RS12045	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VEJY3_RS12055	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VEJY3_RS12060	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
VEJY3_RS12070	COG0750	zinc metalloprotease
VEJY3_RS12075	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
VEJY3_RS12080	COG0575	Belongs to the CDS family
VEJY3_RS12085	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
VEJY3_RS12090	COG0233	cytoplasmic translational termination
VEJY3_RS12095	COG0528	UMP kinase activity
VEJY3_RS12100	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
VEJY3_RS12105	COG0052	Belongs to the universal ribosomal protein uS2 family
VEJY3_RS12110	COG0024	Methionine aminopeptidase
VEJY3_RS12115	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
VEJY3_RS12125	COG0564	pseudouridine synthase activity
VEJY3_RS12150	COG1671	Belongs to the UPF0178 family
VEJY3_RS12155	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VEJY3_RS12165	COG0254	rRNA binding
VEJY3_RS12170	COG1720	tRNA m6t6A37 methyltransferase activity
VEJY3_RS12190	COG0733	neurotransmitter:sodium symporter activity
VEJY3_RS12200	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VEJY3_RS12205	COG0514	ATP-dependent DNA helicase (RecQ)
VEJY3_RS12210	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
VEJY3_RS12220	COG2991	Protein conserved in bacteria
VEJY3_RS12225	COG1477	protein flavinylation
VEJY3_RS12230	COG2871	sodium ion transport
VEJY3_RS12235	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VEJY3_RS12240	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VEJY3_RS12245	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VEJY3_RS12250	COG1805	sodium ion transport
VEJY3_RS12255	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VEJY3_RS12260	COG0271	Belongs to the BolA IbaG family
VEJY3_RS12265	COG2813	Specifically methylates the guanine in position
VEJY3_RS12290	COG1595	DNA-templated transcription, initiation
VEJY3_RS12310	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
VEJY3_RS12315	COG0693	protein deglycase activity
VEJY3_RS12320	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VEJY3_RS12325	COG3706	GGDEF domain
VEJY3_RS12330	COG2166	iron-sulfur cluster assembly
VEJY3_RS12335	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
VEJY3_RS12340	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
VEJY3_RS12350	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VEJY3_RS12350	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VEJY3_RS12355	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
VEJY3_RS12360	COG1074	ATP-dependent DNA helicase activity
VEJY3_RS12365	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
VEJY3_RS12385	COG3141	response to X-ray
VEJY3_RS12395	COG2171	N-acyltransferase activity
VEJY3_RS12400	COG0584	glycerophosphoryl diester phosphodiesterase
VEJY3_RS12405	COG2271	Major facilitator Superfamily
VEJY3_RS12410	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
VEJY3_RS12415	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
VEJY3_RS12420	COG1349	DNA-binding transcription factor activity
VEJY3_RS12425	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
VEJY3_RS12450	COG1609	Transcriptional regulator
VEJY3_RS12455	COG1609	Transcriptional regulator
VEJY3_RS12460	COG0583	DNA-binding transcription factor activity
VEJY3_RS12530	COG4964	Belongs to the GSP D family
VEJY3_RS12560	COG2169	Transcriptional regulator
VEJY3_RS12565	COG1022	Amp-dependent synthetase and ligase
VEJY3_RS12570	COG0583	DNA-binding transcription factor activity
VEJY3_RS12575	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VEJY3_RS12580	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
VEJY3_RS12590	COG0560	Phosphoserine phosphatase
VEJY3_RS12600	COG0813	purine-nucleoside phosphorylase activity
VEJY3_RS12605	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
VEJY3_RS12610	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
VEJY3_RS12615	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
VEJY3_RS12620	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VEJY3_RS12625	COG0084	hydrolase, TatD family'
VEJY3_RS12635	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
VEJY3_RS12650	COG3153	acetyltransferase
VEJY3_RS12655	COG3154	lipid carrier protein
VEJY3_RS12665	COG0826	peptidase U32
VEJY3_RS12670	COG0826	peptidase U32
VEJY3_RS12675	COG0534	Mate efflux family protein
VEJY3_RS12685	COG1185	polyribonucleotide nucleotidyltransferase activity
VEJY3_RS12690	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
VEJY3_RS12695	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
VEJY3_RS12700	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
VEJY3_RS12705	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
VEJY3_RS12710	COG0195	Participates in both transcription termination and antitermination
VEJY3_RS12715	COG0779	Required for maturation of 30S ribosomal subunits
VEJY3_RS12730	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VEJY3_RS12740	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
VEJY3_RS12745	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VEJY3_RS12750	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
VEJY3_RS12755	COG1534	Rna-binding protein
VEJY3_RS12760	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VEJY3_RS12765	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VEJY3_RS12770	COG2027	D-alanyl-D-alanine carboxypeptidase
VEJY3_RS12780	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VEJY3_RS12785	COG0739	heme binding
VEJY3_RS12795	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_RS12800	COG0316	Belongs to the HesB IscA family
VEJY3_RS12805	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
VEJY3_RS12810	COG0628	permease
VEJY3_RS12815	COG2813	Specifically methylates the guanine in position
VEJY3_RS12820	COG2205	protein histidine kinase activity
VEJY3_RS12820	COG0784	Response regulator, receiver
VEJY3_RS12825	COG0747	negative chemotaxis
VEJY3_RS12835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VEJY3_RS12840	COG0444	Belongs to the ABC transporter superfamily
VEJY3_RS12845	COG4608	Belongs to the ABC transporter superfamily
VEJY3_RS12855	COG2971	BadF BadG BcrA BcrD
VEJY3_RS12870	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VEJY3_RS12875	COG3842	ATPase activity
VEJY3_RS12885	COG1840	ABC-type Fe3 transport system, periplasmic component
VEJY3_RS12890	COG0004	ammonium transporteR
VEJY3_RS12900	COG3112	Uncharacterised protein family (UPF0231)
VEJY3_RS12905	COG3835	regulator
VEJY3_RS12910	COG2610	gluconate transmembrane transporter activity
VEJY3_RS12915	COG1929	Belongs to the glycerate kinase type-1 family
VEJY3_RS12920	COG1049	propionate catabolic process, 2-methylcitrate cycle
VEJY3_RS12925	COG1752	Esterase of the alpha-beta hydrolase superfamily
VEJY3_RS12930	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VEJY3_RS12935	COG1643	Atp-dependent helicase
VEJY3_RS12940	COG1489	DNA binding
VEJY3_RS12950	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VEJY3_RS12960	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VEJY3_RS12965	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
VEJY3_RS12970	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
VEJY3_RS12975	COG0842	Transport permease protein
VEJY3_RS12980	COG1131	(ABC) transporter
VEJY3_RS12985	COG0659	secondary active sulfate transmembrane transporter activity
VEJY3_RS12990	COG0288	reversible hydration of carbon dioxide
VEJY3_RS13005	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VEJY3_RS13010	COG0508	dehydrogenase complex catalyzes the overall conversion of
VEJY3_RS13015	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
VEJY3_RS13020	COG2186	Transcriptional regulator
VEJY3_RS13030	COG0157	Belongs to the NadC ModD family
VEJY3_RS13035	COG4969	Belongs to the N-Me-Phe pilin family
VEJY3_RS13040	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VEJY3_RS13045	COG1459	type II secretion system
VEJY3_RS13055	COG0237	dephospho-CoA kinase activity
VEJY3_RS13060	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
VEJY3_RS13065	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
VEJY3_RS13080	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
VEJY3_RS13085	COG0228	four-way junction DNA binding
VEJY3_RS13090	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
VEJY3_RS13095	COG4137	Cytochrome C assembly protein
VEJY3_RS13100	COG4536	flavin adenine dinucleotide binding
VEJY3_RS13105	COG1854	S-ribosylhomocysteine lyase activity
VEJY3_RS13115	COG2918	glutathione biosynthetic process
VEJY3_RS13120	COG0612	Peptidase, M16
VEJY3_RS13125	COG1238	metal cluster binding
VEJY3_RS13135	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VEJY3_RS13140	COG0511	ligase activity, forming carbon-carbon bonds
VEJY3_RS13140	COG5016	pyruvate
VEJY3_RS13145	COG3630	sodium ion export across plasma membrane
VEJY3_RS13195	COG0527	aspartate kinase activity
VEJY3_RS13200	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VEJY3_RS13215	COG1546	Belongs to the CinA family
VEJY3_RS13220	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
VEJY3_RS13225	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VEJY3_RS13235	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
VEJY3_RS13240	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
VEJY3_RS13255	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
VEJY3_RS13260	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
VEJY3_RS13265	COG0148	phosphopyruvate hydratase activity
VEJY3_RS13270	COG0504	CTP synthase activity
VEJY3_RS13280	COG3956	TIGRFAM MazG family protein
VEJY3_RS13285	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VEJY3_RS13290	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
VEJY3_RS13300	COG0736	holo-[acyl-carrier-protein] synthase activity
VEJY3_RS13305	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
VEJY3_RS13310	COG1381	Involved in DNA repair and RecF pathway recombination
VEJY3_RS13315	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
VEJY3_RS13330	COG0481	GTPase activity
VEJY3_RS13335	COG3086	response to oxidative stress
VEJY3_RS13350	COG1595	DNA-templated transcription, initiation
VEJY3_RS13355	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
VEJY3_RS13360	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
VEJY3_RS13365	COG0354	folic acid binding
VEJY3_RS13380	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VEJY3_RS13385	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VEJY3_RS13390	COG3079	Belongs to the UPF0149 family
VEJY3_RS13395	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
VEJY3_RS13400	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
VEJY3_RS13405	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
VEJY3_RS13410	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VEJY3_RS13420	COG0583	DNA-binding transcription factor activity
VEJY3_RS13425	COG1279	arginine transmembrane transporter activity
VEJY3_RS13430	COG0668	transmembrane transport
VEJY3_RS13435	COG0191	fructose-bisphosphate aldolase activity
VEJY3_RS13440	COG0126	phosphoglycerate kinase activity
VEJY3_RS13445	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VEJY3_RS13450	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VEJY3_RS13460	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
VEJY3_RS13475	COG2356	endonuclease I
VEJY3_RS13480	COG1385	rRNA (uridine-N3-)-methyltransferase activity
VEJY3_RS13485	COG0189	ligase activity
VEJY3_RS13490	COG1678	Uncharacterized ACR, COG1678
VEJY3_RS13495	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
VEJY3_RS13510	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
VEJY3_RS13515	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
VEJY3_RS13520	COG0762	integral membrane protein
VEJY3_RS13535	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
VEJY3_RS13540	COG0635	Involved in the biosynthesis of porphyrin-containing compound
VEJY3_RS13545	COG2066	Belongs to the glutaminase family
VEJY3_RS13565	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
VEJY3_RS13570	COG0741	lytic transglycosylase activity
VEJY3_RS13680	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VEJY3_RS13685	COG0300	oxidoreductase activity
VEJY3_RS13700	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_RS13715	COG0795	lipopolysaccharide-transporting ATPase activity
VEJY3_RS13720	COG0795	lipopolysaccharide-transporting ATPase activity
VEJY3_RS13725	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VEJY3_RS13730	COG2927	DNA polymerase III (CHI subunit)
VEJY3_RS13735	COG0525	valine-tRNA ligase activity
VEJY3_RS13760	COG2235	arginine
VEJY3_RS13770	COG0540	Belongs to the ATCase OTCase family
VEJY3_RS13775	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
VEJY3_RS13780	COG0251	oxidation-reduction process
VEJY3_RS13785	COG0204	Acyl-transferase
VEJY3_RS13790	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
VEJY3_RS13795	COG5007	Belongs to the BolA IbaG family
VEJY3_RS13805	COG2854	intermembrane phospholipid transfer
VEJY3_RS13810	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VEJY3_RS13815	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VEJY3_RS13820	COG1127	ABC transporter
VEJY3_RS13830	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
VEJY3_RS13830	COG0517	IMP dehydrogenase activity
VEJY3_RS13840	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
VEJY3_RS13845	COG1137	ATPase activity
VEJY3_RS13855	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VEJY3_RS13860	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_RS13865	COG1660	Displays ATPase and GTPase activities
VEJY3_RS13870	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_RS13875	COG2239	Acts as a magnesium transporter
VEJY3_RS13880	COG0312	modulator of DNA gyrase
VEJY3_RS13885	COG3028	Belongs to the UPF0307 family
VEJY3_RS13890	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VEJY3_RS13895	COG0564	pseudouridine synthase activity
VEJY3_RS13905	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
VEJY3_RS13910	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
VEJY3_RS13915	COG0312	modulator of DNA gyrase
VEJY3_RS13920	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VEJY3_RS13925	COG3164	Protein of unknown function
VEJY3_RS13935	COG0424	maF-like protein
VEJY3_RS13940	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
VEJY3_RS13945	COG1792	Involved in formation and maintenance of cell shape
VEJY3_RS13950	COG1077	Cell shape determining protein MreB Mrl
VEJY3_RS13985	COG4969	Belongs to the N-Me-Phe pilin family
VEJY3_RS13995	COG1459	type II secretion system
VEJY3_RS14000	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VEJY3_RS14010	COG3267	Type II secretory pathway component ExeA
VEJY3_RS14010	COG3409	Peptidoglycan-binding domain 1 protein
VEJY3_RS14035	COG2199	diguanylate cyclase activity
VEJY3_RS14035	COG2200	EAL domain
VEJY3_RS14040	COG0629	single-stranded DNA binding
VEJY3_RS14055	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
VEJY3_RS14065	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VEJY3_RS14070	COG0527	aspartate kinase activity
VEJY3_RS14075	COG1410	methionine synthase
VEJY3_RS14075	COG0646	methionine synthase
VEJY3_RS14125	COG0175	sulfate reduction
VEJY3_RS14130	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
VEJY3_RS14135	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VEJY3_RS14155	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VEJY3_RS14160	COG0735	belongs to the Fur family
VEJY3_RS14170	COG0166	Belongs to the GPI family
VEJY3_RS14175	COG0432	Pfam Uncharacterised protein family UPF0047
VEJY3_RS14180	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VEJY3_RS14205	COG2965	DNA replication, synthesis of RNA primer
VEJY3_RS14210	COG0360	Binds together with S18 to 16S ribosomal RNA
VEJY3_RS14215	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
VEJY3_RS14220	COG0338	D12 class N6 adenine-specific DNA methyltransferase
VEJY3_RS14230	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
VEJY3_RS14235	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
VEJY3_RS14265	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
VEJY3_RS14275	COG0678	peroxiredoxin activity
VEJY3_RS14275	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VEJY3_RS14280	COG0165	Argininosuccinate lyase
VEJY3_RS14280	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VEJY3_RS14285	COG0137	argininosuccinate synthase activity
VEJY3_RS14290	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VEJY3_RS14295	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
VEJY3_RS14305	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
VEJY3_RS14315	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
VEJY3_RS14320	COG0460	homoserine dehydrogenase
VEJY3_RS14320	COG0527	aspartate kinase activity
VEJY3_RS14325	COG0626	cystathionine gamma-synthase activity
VEJY3_RS14335	COG0281	malic enzyme
VEJY3_RS14350	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VEJY3_RS14370	COG2923	Belongs to the DsrF TusC family
VEJY3_RS14375	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
VEJY3_RS14380	COG2964	Protein conserved in bacteria
VEJY3_RS14385	COG0545	Peptidyl-prolyl cis-trans isomerase
VEJY3_RS14395	COG2900	Belongs to the SlyX family
VEJY3_RS14405	COG1047	Peptidyl-prolyl cis-trans
VEJY3_RS14420	COG2249	NAD(P)H dehydrogenase (quinone) activity
VEJY3_RS14425	COG0488	(ABC) transporter
VEJY3_RS14435	COG0429	hydrolase of the alpha beta-hydrolase fold
VEJY3_RS14440	COG3089	Belongs to the UPF0270 family
VEJY3_RS14445	COG3954	Phosphoribulokinase
VEJY3_RS14450	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VEJY3_RS14460	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_RS14470	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VEJY3_RS14475	COG0512	Glutamine amidotransferase of anthranilate synthase
VEJY3_RS14480	COG0180	Tryptophanyl-tRNA synthetase
VEJY3_RS14485	COG0546	phosphoglycolate phosphatase activity
VEJY3_RS14490	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VEJY3_RS14495	COG0557	exoribonuclease II activity
VEJY3_RS14500	COG1959	2 iron, 2 sulfur cluster binding
VEJY3_RS14505	COG1017	nitric oxide dioxygenase activity
VEJY3_RS14505	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VEJY3_RS14510	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
VEJY3_RS14515	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
VEJY3_RS14520	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
VEJY3_RS14525	COG0330	HflC and HflK could
VEJY3_RS14530	COG0330	HflC and HflK could
VEJY3_RS14535	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
VEJY3_RS14545	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
VEJY3_RS14550	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
VEJY3_RS14555	COG0860	N-Acetylmuramoyl-L-alanine amidase
VEJY3_RS14560	COG0802	atpase or kinase
VEJY3_RS14565	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
VEJY3_RS14625	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
VEJY3_RS14630	COG1162	GTPase activity
VEJY3_RS14640	COG0471	metal ion transport
VEJY3_RS14650	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
VEJY3_RS14655	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VEJY3_RS14665	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
VEJY3_RS14670	COG1045	serine acetyltransferase
VEJY3_RS14675	COG4942	peptidase
VEJY3_RS14695	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
VEJY3_RS14700	COG1053	succinate dehydrogenase
VEJY3_RS14705	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
VEJY3_RS14725	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VEJY3_RS14730	COG1509	lysine 2,3-aminomutase activity
VEJY3_RS14735	COG1285	pathogenesis
VEJY3_RS14755	COG0534	Mate efflux family protein
VEJY3_RS14760	COG0205	6-phosphofructokinase activity
VEJY3_RS14770	COG3678	ATP-independent chaperone mediated protein folding
VEJY3_RS14775	COG0745	RESPONSE REGULATOR receiver
VEJY3_RS14780	COG2205	protein histidine kinase activity
VEJY3_RS14785	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
VEJY3_RS14790	COG3030	protein affecting phage T7 exclusion by the F plasmid
VEJY3_RS14795	COG1027	Aspartate ammonia-lyase
VEJY3_RS14800	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VEJY3_RS14805	COG4232	protein-disulfide reductase activity
VEJY3_RS14815	COG3263	regulation of cellular component size
VEJY3_RS14825	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_RS14840	COG0784	Response regulator, receiver
VEJY3_RS14840	COG2198	Histidine kinase
VEJY3_RS14840	COG2205	protein histidine kinase activity
VEJY3_RS14845	COG2814	Major facilitator Superfamily
VEJY3_RS14860	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VEJY3_RS14865	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
VEJY3_RS14870	COG0511	ligase activity, forming carbon-carbon bonds
VEJY3_RS14875	COG0439	Biotin carboxylase
VEJY3_RS14880	COG2264	protein methyltransferase activity
VEJY3_RS14885	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VEJY3_RS14890	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
VEJY3_RS14960	COG3710	Transcriptional regulator
VEJY3_RS14975	COG0138	bifunctional purine biosynthesis protein purh
VEJY3_RS14980	COG0151	Belongs to the GarS family
VEJY3_RS14995	COG1253	flavin adenine dinucleotide binding
VEJY3_RS15000	COG3068	Protein conserved in bacteria
VEJY3_RS15010	COG1573	uracil-dna glycosylase
VEJY3_RS15015	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
VEJY3_RS15020	COG2816	NAD+ diphosphatase activity
VEJY3_RS15025	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
VEJY3_RS15030	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
VEJY3_RS15035	COG0085	RNA polymerase activity
VEJY3_RS15040	COG0222	ribosome binding
VEJY3_RS15045	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
VEJY3_RS15060	COG0250	Participates in transcription elongation, termination and antitermination
VEJY3_RS15065	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VEJY3_RS15105	COG0812	UDP-N-acetylmuramate dehydrogenase activity
VEJY3_RS15115	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VEJY3_RS15160	COG4206	TonB-dependent receptor
VEJY3_RS15180	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VEJY3_RS15185	COG0534	Mate efflux family protein
VEJY3_RS15190	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
VEJY3_RS15195	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
VEJY3_RS15200	COG2937	Belongs to the GPAT DAPAT family
VEJY3_RS15205	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
VEJY3_RS15210	COG3161	chorismate lyase activity
VEJY3_RS15215	COG1580	Controls the rotational direction of flagella during chemotaxis
VEJY3_RS15220	COG0705	Rhomboid family
VEJY3_RS15235	COG2177	Part of the ABC transporter FtsEX involved in
VEJY3_RS15240	COG2884	Cell division ATP-binding protein ftsE
VEJY3_RS15245	COG0552	protein localization to endoplasmic reticulum
VEJY3_RS15245	COG0552	protein localization to endoplasmic reticulum
VEJY3_RS15250	COG0742	ribosomal rna small subunit methyltransferase
VEJY3_RS15295	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VEJY3_RS15300	COG0640	Transcriptional regulator
VEJY3_RS15305	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VEJY3_RS15310	COG1280	lysine exporter protein (LysE YggA)
VEJY3_RS15315	COG2267	carboxylic ester hydrolase activity
VEJY3_RS15320	COG0561	phosphatase activity
VEJY3_RS15335	COG3148	PFAM DTW domain containing protein
VEJY3_RS15340	COG1011	Hydrolase
VEJY3_RS15345	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
VEJY3_RS15355	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
VEJY3_RS15360	COG0019	diaminopimelate decarboxylase activity
VEJY3_RS15365	COG1965	Belongs to the frataxin family
VEJY3_RS15370	COG3072	Adenylate cyclase
VEJY3_RS15375	COG0181	hydroxymethylbilane synthase activity
VEJY3_RS15380	COG1587	Uroporphyrinogen-III synthase
VEJY3_RS15385	COG2959	enzyme of heme biosynthesis
VEJY3_RS15390	COG3071	HemY protein
VEJY3_RS15435	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
VEJY3_RS15450	COG3118	belongs to the thioredoxin family
VEJY3_RS15455	COG0513	Belongs to the DEAD box helicase family
VEJY3_RS15460	COG0248	Ppx GppA phosphatase
VEJY3_RS15465	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
VEJY3_RS15475	COG0514	ATP-dependent DNA helicase (RecQ)
VEJY3_RS15480	COG2962	Rard protein
VEJY3_RS15490	COG1280	lysine exporter protein (LysE YggA)
VEJY3_RS15495	COG0405	Gamma-glutamyltransferase
VEJY3_RS15500	COG0210	DNA helicase
VEJY3_RS15510	COG3220	belongs to the UPF0276 family
VEJY3_RS15540	COG0006	proline dipeptidase activity
VEJY3_RS15540	COG0006	proline dipeptidase activity
VEJY3_RS15550	COG2022	thiamine diphosphate biosynthetic process
VEJY3_RS15555	COG2104	thiamine diphosphate biosynthetic process
VEJY3_RS15560	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VEJY3_RS15570	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
VEJY3_RS15575	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
VEJY3_RS15580	COG2132	Multicopper oxidase
VEJY3_RS15630	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
VEJY3_RS15640	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
VEJY3_RS15645	COG0408	coproporphyrinogen oxidase activity
VEJY3_RS15650	COG0009	L-threonylcarbamoyladenylate synthase
VEJY3_RS15655	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
VEJY3_RS15660	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
VEJY3_RS15665	COG0551	DNA topoisomerase type I activity
VEJY3_RS15670	COG2922	Belongs to the Smg family
VEJY3_RS15675	COG0758	DNA mediated transformation
VEJY3_RS15695	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VEJY3_RS15695	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VEJY3_RS15700	COG0569	domain protein
VEJY3_RS15705	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VEJY3_RS15715	COG1272	protein, Hemolysin III
VEJY3_RS15720	COG4326	sporulation control protein
VEJY3_RS15725	COG3084	Protein conserved in bacteria
VEJY3_RS15735	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
VEJY3_RS15740	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VEJY3_RS15745	COG0204	Acyl-transferase
VEJY3_RS15755	COG0606	chelatase, subunit chli
VEJY3_RS15765	COG3978	acetolactate synthase activity
VEJY3_RS15780	COG0583	DNA-binding transcription factor activity
VEJY3_RS15785	COG2814	Major facilitator Superfamily
VEJY3_RS15790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_RS15795	COG0765	amino acid transport
VEJY3_RS15805	COG0355	proton-transporting ATP synthase activity, rotational mechanism
VEJY3_RS15810	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
VEJY3_RS15815	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
VEJY3_RS15820	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
VEJY3_RS15825	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VEJY3_RS15840	COG0356	it plays a direct role in the translocation of protons across the membrane
VEJY3_RS15845	COG3312	ion transport
VEJY3_RS15850	COG1475	DNA binding
VEJY3_RS15855	COG1192	Involved in chromosome partitioning
VEJY3_RS15945	COG0187	DNA topoisomerase II activity
VEJY3_RS15975	COG0366	Alpha amylase catalytic
VEJY3_RS16035	COG0183	Belongs to the thiolase family
VEJY3_RS16110	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VEJY3_RS16155	COG0444	Belongs to the ABC transporter superfamily
VEJY3_RS16435	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
VEJY3_RS16650	COG1218	3'(2'),5'-bisphosphate nucleotidase
VEJY3_RS17530	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VEJY3_RS17560	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
VEJY3_RS17685	COG2213	PTS system mannitol-specific
VEJY3_RS17685	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_RS17970	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
VEJY3_RS18110	COG0493	'glutamate synthase
VEJY3_RS18120	COG0069	glutamate synthase activity
VEJY3_RS18120	COG0070	glutamate synthase
VEJY3_RS18120	COG0067	glutamate synthase
VEJY3_RS18145	COG0067	glutamate synthase
VEJY3_RS18145	COG0069	glutamate synthase activity
VEJY3_RS18145	COG0070	glutamate synthase
VEJY3_RS18150	COG0069	glutamate synthase activity
VEJY3_RS18150	COG0070	glutamate synthase
VEJY3_RS18150	COG0067	glutamate synthase
VEJY3_RS18335	COG0196	riboflavin kinase activity
VEJY3_RS18345	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
VEJY3_RS18350	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
VEJY3_RS18355	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
VEJY3_RS19045	COG0047	phosphoribosylformylglycinamidine synthase activity
VEJY3_RS19045	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
VEJY3_RS19260	COG0768	penicillin binding
VEJY3_RS19290	COG0495	leucyl-tRNA aminoacylation
VEJY3_RS19310	COG0815	Transfers the fatty acyl group on membrane lipoproteins
VEJY3_RS19380	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
VEJY3_RS19510	COG1749	Flagellar hook protein flgE
VEJY3_RS19675	COG0326	Molecular chaperone. Has ATPase activity
VEJY3_RS19730	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VEJY3_RS19945	COG2894	cell division
VEJY3_RS20405	COG1176	ABC-type spermidine putrescine transport system, permease component I
VEJY3_RS20660	COG0542	response to heat
VEJY3_RS20770	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VEJY3_RS20775	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VEJY3_RS20965	COG0784	Response regulator, receiver
VEJY3_RS20965	COG5002	protein histidine kinase activity
VEJY3_RS20980	COG0582	viral genome integration into host DNA
VEJY3_RS21730	COG1061	Type III restriction enzyme res subunit
VEJY3_RS21750	COG2814	Major facilitator Superfamily
VEJY3_RS21785	COG0702	epimerase
VEJY3_RS21960	COG0471	metal ion transport
VEJY3_RS22445	COG4638	Rieske (2fe-2S)
VEJY3_RS22765	COG1132	(ABC) transporter
VEJY3_RS22770	COG1132	(ABC) transporter
VEJY3_RS23260	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VEJY3_RS23365	COG3008	intermembrane lipid transfer
VEJY3_RS23680	COG4774	siderophore transport
VEJY3_RS23685	COG4774	siderophore transport
VEJY3_RS23735	COG0527	aspartate kinase activity
VEJY3_RS24015	COG1012	belongs to the aldehyde dehydrogenase family