locus-tag class description J4N38_RS00005 PF00308 Bacterial dnaA protein J4N38_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix J4N38_RS00005 PF11638 DnaA N-terminal domain J4N38_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J4N38_RS00010 PF02767 DNA polymerase III beta subunit, central domain J4N38_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J4N38_RS00015 PF02463 RecF/RecN/SMC N terminal domain J4N38_RS00020 PF00204 DNA gyrase B J4N38_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus J4N38_RS00020 PF18053 DNA gyrase B subunit insert domain J4N38_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS00020 PF01751 Toprim domain J4N38_RS00025 PF00011 Hsp20/alpha crystallin family J4N38_RS00030 PF00155 Aminotransferase class I and II J4N38_RS00035 PF05746 DALR anticodon binding domain J4N38_RS00035 PF02092 Glycyl-tRNA synthetase beta subunit J4N38_RS00040 PF02091 Glycyl-tRNA synthetase alpha subunit J4N38_RS00045 PF01169 Uncharacterized protein family UPF0016 J4N38_RS00055 PF01206 Sulfurtransferase TusA J4N38_RS00065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS00065 PF03466 LysR substrate binding domain J4N38_RS00070 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_RS00070 PF00107 Zinc-binding dehydrogenase J4N38_RS00075 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_RS00075 PF00585 C-terminal regulatory domain of Threonine dehydratase J4N38_RS00080 PF00920 Dehydratase family J4N38_RS00085 PF01063 Amino-transferase class IV J4N38_RS00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_RS00095 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_RS00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_RS00120 PF02899 Phage integrase, N-terminal SAM-like domain J4N38_RS00120 PF00589 Phage integrase family J4N38_RS00135 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS00140 PF04851 Type III restriction enzyme, res subunit J4N38_RS00205 PF01553 Acyltransferase J4N38_RS00210 PF01323 DSBA-like thioredoxin domain J4N38_RS00215 PF01636 Phosphotransferase enzyme family J4N38_RS00220 PF13746 4Fe-4S dicluster domain J4N38_RS00220 PF12801 4Fe-4S binding domain J4N38_RS00220 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J4N38_RS00225 PF06288 Protein of unknown function (DUF1040) J4N38_RS00235 PF07070 SpoOM protein J4N38_RS00240 PF03006 Haemolysin-III related J4N38_RS00250 PF02386 Cation transport protein J4N38_RS00255 PF02080 TrkA-C domain J4N38_RS00255 PF02254 TrkA-N domain J4N38_RS00260 PF01189 16S rRNA methyltransferase RsmB/F J4N38_RS00260 PF01029 NusB family J4N38_RS00265 PF02911 Formyl transferase, C-terminal domain J4N38_RS00265 PF00551 Formyl transferase J4N38_RS00270 PF01327 Polypeptide deformylase J4N38_RS00275 PF02481 DNA recombination-mediator protein A J4N38_RS00275 PF17782 DprA winged helix domain J4N38_RS00280 PF04361 Protein of unknown function (DUF494) J4N38_RS00285 PF01396 Topoisomerase DNA binding C4 zinc finger J4N38_RS00290 PF02222 ATP-grasp domain J4N38_RS00290 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4N38_RS00295 PF00731 AIR carboxylase J4N38_RS00300 PF01300 Telomere recombination J4N38_RS00305 PF01218 Coproporphyrinogen III oxidase J4N38_RS00310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4N38_RS00310 PF01488 Shikimate / quinate 5-dehydrogenase J4N38_RS00310 PF08501 Shikimate dehydrogenase substrate binding domain J4N38_RS00315 PF07369 Protein of unknown function (DUF1488) J4N38_RS00320 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS00385 PF00962 Adenosine/AMP deaminase J4N38_RS00390 PF13188 PAS domain J4N38_RS00390 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS00390 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS00390 PF00563 EAL domain J4N38_RS00395 PF02954 Bacterial regulatory protein, Fis family J4N38_RS00395 PF00072 Response regulator receiver domain J4N38_RS00395 PF00158 Sigma-54 interaction domain J4N38_RS00400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS00400 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS00400 PF00989 PAS fold J4N38_RS00405 PF00120 Glutamine synthetase, catalytic domain J4N38_RS00405 PF03951 Glutamine synthetase, beta-Grasp domain J4N38_RS00410 PF00679 Elongation factor G C-terminus J4N38_RS00410 PF00009 Elongation factor Tu GTP binding domain J4N38_RS00410 PF03144 Elongation factor Tu domain 2 J4N38_RS00425 PF03631 Virulence factor BrkB J4N38_RS00430 PF02580 D-Tyr-tRNA(Tyr) deacylase J4N38_RS00435 PF00583 Acetyltransferase (GNAT) family J4N38_RS00435 PF09500 Putative thioesterase (yiiD_Cterm) J4N38_RS00445 PF01293 Phosphoenolpyruvate carboxykinase J4N38_RS00450 PF01430 Hsp33 protein J4N38_RS00455 PF01479 S4 domain J4N38_RS00460 PF11356 Type II secretion system protein C J4N38_RS00465 PF00263 Bacterial type II and III secretion system protein J4N38_RS00465 PF03958 Bacterial type II/III secretion system short domain J4N38_RS00470 PF00437 Type II/IV secretion system protein J4N38_RS00475 PF00482 Type II secretion system (T2SS), protein F J4N38_RS00480 PF07963 Prokaryotic N-terminal methylation motif J4N38_RS00480 PF08334 Type II secretion system (T2SS), protein G J4N38_RS00485 PF12019 Type II transport protein GspH J4N38_RS00490 PF02501 Type II secretion system (T2SS), protein I J4N38_RS00490 PF07963 Prokaryotic N-terminal methylation motif J4N38_RS00495 PF07963 Prokaryotic N-terminal methylation motif J4N38_RS00495 PF11612 Type II secretion system (T2SS), protein J J4N38_RS00500 PF03934 Type II secretion system (T2SS), protein K J4N38_RS00505 PF12693 GspL periplasmic domain J4N38_RS00505 PF05134 Type II secretion system (T2SS), protein L J4N38_RS00510 PF04612 Type II secretion system (T2SS), protein M J4N38_RS00515 PF01203 Type II secretion system (T2SS), protein N J4N38_RS00520 PF00672 HAMP domain J4N38_RS00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS00520 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS00525 PF00072 Response regulator receiver domain J4N38_RS00525 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS00530 PF03449 Transcription elongation factor, N-terminal J4N38_RS00530 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N38_RS00540 PF16921 Tex protein YqgF-like domain J4N38_RS00540 PF17674 HHH domain J4N38_RS00540 PF00575 S1 RNA binding domain J4N38_RS00540 PF09371 Tex-like protein N-terminal domain J4N38_RS00550 PF00561 alpha/beta hydrolase fold J4N38_RS00555 PF00156 Phosphoribosyl transferase domain J4N38_RS00560 PF01106 NifU-like domain J4N38_RS00560 PF01521 Iron-sulphur cluster biosynthesis J4N38_RS00565 PF00293 NUDIX domain J4N38_RS00570 PF00459 Inositol monophosphatase family J4N38_RS00575 PF00156 Phosphoribosyl transferase domain J4N38_RS00580 PF03725 3' exoribonuclease family, domain 2 J4N38_RS00580 PF01138 3' exoribonuclease family, domain 1 J4N38_RS00585 PF08340 Domain of unknown function (DUF1732) J4N38_RS00585 PF03755 YicC-like family, N-terminal region J4N38_RS00590 PF00860 Permease family J4N38_RS00595 PF00625 Guanylate kinase J4N38_RS00600 PF01192 RNA polymerase Rpb6 J4N38_RS00605 PF13291 ACT domain J4N38_RS00605 PF04607 Region found in RelA / SpoT proteins J4N38_RS00605 PF02824 TGS domain J4N38_RS00610 PF00588 SpoU rRNA Methylase family J4N38_RS00610 PF12105 SpoU, rRNA methylase, C-terminal J4N38_RS00615 PF00270 DEAD/DEAH box helicase J4N38_RS00615 PF00271 Helicase conserved C-terminal domain J4N38_RS00615 PF17191 RecG wedge domain J4N38_RS00620 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N38_RS00625 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N38_RS00630 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS00635 PF04127 DNA / pantothenate metabolism flavoprotein J4N38_RS00635 PF02441 Flavoprotein J4N38_RS00640 PF04002 RadC-like JAB domain J4N38_RS00645 PF00830 Ribosomal L28 family J4N38_RS00650 PF00471 Ribosomal protein L33 J4N38_RS00660 PF06827 Zinc finger found in FPG and IleRS J4N38_RS00660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4N38_RS00660 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4N38_RS00665 PF01467 Cytidylyltransferase-like J4N38_RS00670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N38_RS00675 PF00535 Glycosyl transferase family 2 J4N38_RS00680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N38_RS00690 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS00690 PF00970 Oxidoreductase FAD-binding domain J4N38_RS00690 PF00175 Oxidoreductase NAD-binding domain J4N38_RS00695 PF00483 Nucleotidyl transferase J4N38_RS00700 PF16363 GDP-mannose 4,6 dehydratase J4N38_RS00705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N38_RS00710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4N38_RS00735 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4N38_RS00735 PF00534 Glycosyl transferases group 1 J4N38_RS00740 PF04488 Glycosyltransferase sugar-binding region containing DXD motif J4N38_RS00750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N38_RS00755 PF12464 Maltose acetyltransferase J4N38_RS00755 PF14602 Hexapeptide repeat of succinyl-transferase J4N38_RS00755 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS00765 PF04932 O-Antigen ligase J4N38_RS00770 PF00534 Glycosyl transferases group 1 J4N38_RS00775 PF01370 NAD dependent epimerase/dehydratase family J4N38_RS00780 PF16363 GDP-mannose 4,6 dehydratase J4N38_RS00785 PF00483 Nucleotidyl transferase J4N38_RS00790 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J4N38_RS00795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N38_RS00810 PF00664 ABC transporter transmembrane region J4N38_RS00810 PF00005 ABC transporter J4N38_RS00815 PF02719 Polysaccharide biosynthesis protein J4N38_RS00820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N38_RS00825 PF02350 UDP-N-acetylglucosamine 2-epimerase J4N38_RS00830 PF03102 NeuB family J4N38_RS00830 PF08666 SAF domain J4N38_RS00845 PF00483 Nucleotidyl transferase J4N38_RS00850 PF02348 Cytidylyltransferase J4N38_RS00885 PF00535 Glycosyl transferase family 2 J4N38_RS00895 PF13006 Insertion element 4 transposase N-terminal J4N38_RS00895 PF01609 Transposase DDE domain J4N38_RS00905 PF02397 Bacterial sugar transferase J4N38_RS00910 PF13091 PLD-like domain J4N38_RS00915 PF02237 Biotin protein ligase C terminal domain J4N38_RS00915 PF03099 Biotin/lipoate A/B protein ligase family J4N38_RS00915 PF08279 HTH domain J4N38_RS00920 PF01565 FAD binding domain J4N38_RS00920 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4N38_RS00930 PF08220 DeoR-like helix-turn-helix domain J4N38_RS00930 PF00455 DeoR C terminal sensor domain J4N38_RS00945 PF00166 Chaperonin 10 Kd subunit J4N38_RS00950 PF00118 TCP-1/cpn60 chaperonin family J4N38_RS00955 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4N38_RS00955 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4N38_RS00955 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4N38_RS00960 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J4N38_RS00965 PF06005 Cell division protein ZapB J4N38_RS00970 PF02219 Methylenetetrahydrofolate reductase J4N38_RS00975 PF00742 Homoserine dehydrogenase J4N38_RS00975 PF00696 Amino acid kinase family J4N38_RS00975 PF03447 Homoserine dehydrogenase, NAD binding domain J4N38_RS00980 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N38_RS00985 PF01340 Met Apo-repressor, MetJ J4N38_RS00990 PF00390 Malic enzyme, N-terminal domain J4N38_RS00990 PF03949 Malic enzyme, NAD binding domain J4N38_RS00995 PF01197 Ribosomal protein L31 J4N38_RS01000 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4N38_RS01000 PF00270 DEAD/DEAH box helicase J4N38_RS01000 PF00271 Helicase conserved C-terminal domain J4N38_RS01000 PF17764 3′ DNA-binding domain (3′BD) J4N38_RS01000 PF18074 Primosomal protein N C-terminal domain J4N38_RS01005 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS01010 PF05036 Sporulation related domain J4N38_RS01015 PF00227 Proteasome subunit J4N38_RS01020 PF07724 AAA domain (Cdc48 subfamily) J4N38_RS01020 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS01025 PF01609 Transposase DDE domain J4N38_RS01025 PF13006 Insertion element 4 transposase N-terminal J4N38_RS01030 PF02313 Fumarate reductase subunit D J4N38_RS01035 PF02300 Fumarate reductase subunit C J4N38_RS01040 PF13085 2Fe-2S iron-sulfur cluster binding domain J4N38_RS01040 PF13183 4Fe-4S dicluster domain J4N38_RS01045 PF02910 Fumarate reductase flavoprotein C-term J4N38_RS01045 PF00890 FAD binding domain J4N38_RS01050 PF00152 tRNA synthetases class II (D, K and N) J4N38_RS01055 PF06082 Exopolysaccharide biosynthesis protein YbjH J4N38_RS01060 PF06251 Capsule biosynthesis GfcC J4N38_RS01065 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF J4N38_RS01090 PF00581 Rhodanese-like domain J4N38_RS01095 PF02556 Preprotein translocase subunit SecB J4N38_RS01100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4N38_RS01100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4N38_RS01105 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS01105 PF06426 Serine acetyltransferase, N-terminal J4N38_RS01110 PF10400 Virulence activator alpha C-term J4N38_RS01110 PF03551 Transcriptional regulator PadR-like family J4N38_RS01115 PF00311 Phosphoenolpyruvate carboxylase J4N38_RS01120 PF03167 Uracil DNA glycosylase superfamily J4N38_RS01125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_RS01130 PF04222 Protein of unknown function (DUF416) J4N38_RS01135 PF00571 CBS domain J4N38_RS01135 PF01595 Cyclin M transmembrane N-terminal domain J4N38_RS01140 PF00216 Bacterial DNA-binding protein J4N38_RS01150 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4N38_RS01150 PF02843 Phosphoribosylglycinamide synthetase, C domain J4N38_RS01150 PF02844 Phosphoribosylglycinamide synthetase, N domain J4N38_RS01155 PF02142 MGS-like domain J4N38_RS01155 PF01808 AICARFT/IMPCHase bienzyme J4N38_RS01160 PF13411 MerR HTH family regulatory protein J4N38_RS01165 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS01165 PF08448 PAS fold J4N38_RS01170 PF02954 Bacterial regulatory protein, Fis family J4N38_RS01175 PF01207 Dihydrouridine synthase (Dus) J4N38_RS01185 PF02785 Biotin carboxylase C-terminal domain J4N38_RS01185 PF00289 Biotin carboxylase, N-terminal domain J4N38_RS01185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4N38_RS01190 PF00364 Biotin-requiring enzyme J4N38_RS01195 PF01220 Dehydroquinase class II J4N38_RS01200 PF13193 AMP-binding enzyme C-terminal domain J4N38_RS01200 PF16177 Acetyl-coenzyme A synthetase N-terminus J4N38_RS01200 PF00501 AMP-binding enzyme J4N38_RS01215 PF12832 MFS_1 like family J4N38_RS01220 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS01220 PF00072 Response regulator receiver domain J4N38_RS01220 PF09308 LuxQ, periplasmic J4N38_RS01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS01225 PF00485 Phosphoribulokinase / Uridine kinase family J4N38_RS01255 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4N38_RS01260 PF00467 KOW motif J4N38_RS01260 PF02357 Transcription termination factor nusG J4N38_RS01265 PF00298 Ribosomal protein L11, RNA binding domain J4N38_RS01265 PF03946 Ribosomal protein L11, N-terminal domain J4N38_RS01270 PF00687 Ribosomal protein L1p/L10e family J4N38_RS01275 PF00466 Ribosomal protein L10 J4N38_RS01280 PF00542 Ribosomal protein L7/L12 C-terminal domain J4N38_RS01280 PF16320 Ribosomal protein L7/L12 dimerisation domain J4N38_RS01285 PF10385 RNA polymerase beta subunit external 1 domain J4N38_RS01285 PF04565 RNA polymerase Rpb2, domain 3 J4N38_RS01285 PF00562 RNA polymerase Rpb2, domain 6 J4N38_RS01285 PF04563 RNA polymerase beta subunit J4N38_RS01285 PF04561 RNA polymerase Rpb2, domain 2 J4N38_RS01285 PF04560 RNA polymerase Rpb2, domain 7 J4N38_RS01290 PF04998 RNA polymerase Rpb1, domain 5 J4N38_RS01290 PF05000 RNA polymerase Rpb1, domain 4 J4N38_RS01290 PF00623 RNA polymerase Rpb1, domain 2 J4N38_RS01290 PF04997 RNA polymerase Rpb1, domain 1 J4N38_RS01290 PF04983 RNA polymerase Rpb1, domain 3 J4N38_RS01295 PF03605 Anaerobic c4-dicarboxylate membrane transporter J4N38_RS01300 PF10415 Fumarase C C-terminus J4N38_RS01300 PF00206 Lyase J4N38_RS01305 PF04186 FxsA cytoplasmic membrane protein J4N38_RS01375 PF00117 Glutamine amidotransferase class-I J4N38_RS01380 PF00202 Aminotransferase class-III J4N38_RS01385 PF04958 Arginine N-succinyltransferase beta subunit J4N38_RS01390 PF00171 Aldehyde dehydrogenase family J4N38_RS01400 PF02666 Phosphatidylserine decarboxylase J4N38_RS01405 PF03193 RsgA GTPase J4N38_RS01410 PF00929 Exonuclease J4N38_RS01460 PF08331 Domain of unknown function (DUF1730) J4N38_RS01465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4N38_RS01470 PF01520 N-acetylmuramoyl-L-alanine amidase J4N38_RS01475 PF08676 MutL C terminal dimerisation domain J4N38_RS01475 PF01119 DNA mismatch repair protein, C-terminal domain J4N38_RS01485 PF17209 Hfq protein J4N38_RS01490 PF16360 GTP-binding GTPase Middle Region J4N38_RS01490 PF13167 GTP-binding GTPase N-terminal J4N38_RS01490 PF01926 50S ribosome-binding GTPase J4N38_RS01495 PF01145 SPFH domain / Band 7 family J4N38_RS01495 PF12221 Bacterial membrane protein N terminal J4N38_RS01500 PF01145 SPFH domain / Band 7 family J4N38_RS01505 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) J4N38_RS01510 PF04102 SlyX J4N38_RS01520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N38_RS01520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_RS01525 PF13309 HTH domain J4N38_RS01525 PF08348 YheO-like PAS domain J4N38_RS01530 PF02635 DsrE/DsrF-like family J4N38_RS01535 PF02635 DsrE/DsrF-like family J4N38_RS01540 PF04077 DsrH like protein J4N38_RS01545 PF00164 Ribosomal protein S12/S23 J4N38_RS01550 PF00177 Ribosomal protein S7p/S5e J4N38_RS01555 PF00679 Elongation factor G C-terminus J4N38_RS01555 PF14492 Elongation Factor G, domain II J4N38_RS01555 PF03764 Elongation factor G, domain IV J4N38_RS01555 PF00009 Elongation factor Tu GTP binding domain J4N38_RS01555 PF03144 Elongation factor Tu domain 2 J4N38_RS01560 PF00009 Elongation factor Tu GTP binding domain J4N38_RS01560 PF03144 Elongation factor Tu domain 2 J4N38_RS01560 PF03143 Elongation factor Tu C-terminal domain J4N38_RS01565 PF04324 BFD-like [2Fe-2S] binding domain J4N38_RS01570 PF00210 Ferritin-like domain J4N38_RS01575 PF01250 Ribosomal protein S6 J4N38_RS01580 PF01084 Ribosomal protein S18 J4N38_RS01585 PF03948 Ribosomal protein L9, C-terminal domain J4N38_RS01585 PF01281 Ribosomal protein L9, N-terminal domain J4N38_RS01595 PF00772 DnaB-like helicase N terminal domain J4N38_RS01595 PF03796 DnaB-like helicase C terminal domain J4N38_RS01600 PF00842 Alanine racemase, C-terminal domain J4N38_RS01600 PF01168 Alanine racemase, N-terminal domain J4N38_RS01605 PF01894 Uncharacterised protein family UPF0047 J4N38_RS01610 PF00342 Phosphoglucose isomerase J4N38_RS01630 PF00005 ABC transporter J4N38_RS01645 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) J4N38_RS01655 PF01625 Peptide methionine sulfoxide reductase J4N38_RS01660 PF17243 POTRA domain TamA domain 1 J4N38_RS01660 PF01103 Surface antigen J4N38_RS01660 PF07244 Surface antigen variable number repeat J4N38_RS01665 PF04357 TamB, inner membrane protein subunit of TAM complex J4N38_RS01670 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like J4N38_RS01675 PF00719 Inorganic pyrophosphatase J4N38_RS01680 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4N38_RS01685 PF01225 Mur ligase family, catalytic domain J4N38_RS01685 PF02875 Mur ligase family, glutamate ligase domain J4N38_RS01685 PF08245 Mur ligase middle domain J4N38_RS01690 PF02441 Flavoprotein J4N38_RS01700 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS01705 PF00005 ABC transporter J4N38_RS01715 PF17755 UvrA DNA-binding domain J4N38_RS01715 PF17760 UvrA interaction domain J4N38_RS01715 PF00005 ABC transporter J4N38_RS01720 PF00483 Nucleotidyl transferase J4N38_RS01725 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS01730 PF00436 Single-strand binding protein family J4N38_RS01735 PF00563 EAL domain J4N38_RS01735 PF17157 Gammaproteobacterial periplasmic sensor domain J4N38_RS01735 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS01755 PF03958 Bacterial type II/III secretion system short domain J4N38_RS01755 PF00263 Bacterial type II and III secretion system protein J4N38_RS01760 PF01471 Putative peptidoglycan binding domain J4N38_RS01760 PF13401 AAA domain J4N38_RS01770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N38_RS01770 PF00437 Type II/IV secretion system protein J4N38_RS01775 PF00482 Type II secretion system (T2SS), protein F J4N38_RS01785 PF07963 Prokaryotic N-terminal methylation motif J4N38_RS01790 PF07963 Prokaryotic N-terminal methylation motif J4N38_RS01825 PF04085 rod shape-determining protein MreC J4N38_RS01830 PF04093 rod shape-determining protein MreD J4N38_RS01835 PF02545 Maf-like protein J4N38_RS01840 PF10150 Ribonuclease E/G family J4N38_RS01840 PF00575 S1 RNA binding domain J4N38_RS01845 PF13502 AsmA-like C-terminal region J4N38_RS01845 PF13116 Protein of unknown function J4N38_RS01850 PF00795 Carbon-nitrogen hydrolase J4N38_RS01855 PF01523 Putative modulator of DNA gyrase J4N38_RS01905 PF01464 Transglycosylase SLT domain J4N38_RS01905 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J4N38_RS01910 PF04362 Bacterial Fe(2+) trafficking J4N38_RS01915 PF00633 Helix-hairpin-helix motif J4N38_RS01915 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N38_RS01915 PF14815 NUDIX domain J4N38_RS01920 PF02390 Putative methyltransferase J4N38_RS01925 PF04960 Glutaminase J4N38_RS01930 PF06969 HemN C-terminal domain J4N38_RS01930 PF04055 Radical SAM superfamily J4N38_RS01935 PF01725 Ham1 family J4N38_RS01955 PF13006 Insertion element 4 transposase N-terminal J4N38_RS01955 PF01609 Transposase DDE domain J4N38_RS01970 PF02594 Uncharacterised ACR, YggU family COG1872 J4N38_RS01975 PF02325 YGGT family J4N38_RS01980 PF03807 NADP oxidoreductase coenzyme F420-dependent J4N38_RS01980 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4N38_RS01985 PF01168 Alanine racemase, N-terminal domain J4N38_RS01990 PF00437 Type II/IV secretion system protein J4N38_RS01995 PF00437 Type II/IV secretion system protein J4N38_RS02000 PF03652 Holliday junction resolvase J4N38_RS02005 PF02622 Uncharacterized ACR, COG1678 J4N38_RS02010 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4N38_RS02010 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4N38_RS02015 PF04452 RNA methyltransferase J4N38_RS02020 PF04231 Endonuclease I J4N38_RS02025 PF17283 SprT-like zinc ribbon domain J4N38_RS02025 PF10263 SprT-like family J4N38_RS02035 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4N38_RS02035 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4N38_RS02035 PF02772 S-adenosylmethionine synthetase, central domain J4N38_RS02045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N38_RS02045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N38_RS02050 PF00162 Phosphoglycerate kinase J4N38_RS02055 PF01116 Fructose-bisphosphate aldolase class-II J4N38_RS02060 PF00924 Mechanosensitive ion channel J4N38_RS02060 PF05552 Conserved TM helix J4N38_RS02070 PF01810 LysE type translocator J4N38_RS02075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS02075 PF03466 LysR substrate binding domain J4N38_RS02080 PF04402 Protein of unknown function (DUF541) J4N38_RS02085 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS02085 PF07694 5TMR of 5TMR-LYT J4N38_RS02095 PF00224 Pyruvate kinase, barrel domain J4N38_RS02095 PF02887 Pyruvate kinase, alpha/beta domain J4N38_RS02100 PF00455 DeoR C terminal sensor domain J4N38_RS02100 PF08220 DeoR-like helix-turn-helix domain J4N38_RS02105 PF01380 SIS domain J4N38_RS02110 PF00694 Aconitase C-terminal domain J4N38_RS02115 PF00330 Aconitase family (aconitate hydratase) J4N38_RS02130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_RS02130 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_RS02130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_RS02135 PF00501 AMP-binding enzyme J4N38_RS02140 PF03466 LysR substrate binding domain J4N38_RS02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS02155 PF00682 HMGL-like J4N38_RS02155 PF08502 LeuA allosteric (dimerisation) domain J4N38_RS02160 PF00180 Isocitrate/isopropylmalate dehydrogenase J4N38_RS02165 PF00330 Aconitase family (aconitate hydratase) J4N38_RS02170 PF00694 Aconitase C-terminal domain J4N38_RS02175 PF01380 SIS domain J4N38_RS02180 PF00455 DeoR C terminal sensor domain J4N38_RS02180 PF08220 DeoR-like helix-turn-helix domain J4N38_RS02185 PF02887 Pyruvate kinase, alpha/beta domain J4N38_RS02185 PF00224 Pyruvate kinase, barrel domain J4N38_RS02195 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS02195 PF07694 5TMR of 5TMR-LYT J4N38_RS02200 PF04402 Protein of unknown function (DUF541) J4N38_RS02205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS02205 PF03466 LysR substrate binding domain J4N38_RS02230 PF01116 Fructose-bisphosphate aldolase class-II J4N38_RS02235 PF05552 Conserved TM helix J4N38_RS02235 PF00924 Mechanosensitive ion channel J4N38_RS02245 PF01810 LysE type translocator J4N38_RS02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS02250 PF03466 LysR substrate binding domain J4N38_RS02255 PF04402 Protein of unknown function (DUF541) J4N38_RS02260 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS02260 PF07694 5TMR of 5TMR-LYT J4N38_RS02270 PF00224 Pyruvate kinase, barrel domain J4N38_RS02270 PF02887 Pyruvate kinase, alpha/beta domain J4N38_RS02275 PF08220 DeoR-like helix-turn-helix domain J4N38_RS02275 PF00455 DeoR C terminal sensor domain J4N38_RS02280 PF01380 SIS domain J4N38_RS02285 PF00694 Aconitase C-terminal domain J4N38_RS02290 PF00330 Aconitase family (aconitate hydratase) J4N38_RS02300 PF00682 HMGL-like J4N38_RS02300 PF08502 LeuA allosteric (dimerisation) domain J4N38_RS02315 PF03466 LysR substrate binding domain J4N38_RS02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS02320 PF00501 AMP-binding enzyme J4N38_RS02325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_RS02325 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_RS02325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_RS02330 PF10369 Small subunit of acetolactate synthase J4N38_RS02335 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N38_RS02340 PF07690 Major Facilitator Superfamily J4N38_RS02345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N38_RS02345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_RS02345 PF01842 ACT domain J4N38_RS02350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4N38_RS02355 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4N38_RS02370 PF03695 Uncharacterised protein family (UPF0149) J4N38_RS02375 PF01494 FAD binding domain J4N38_RS02380 PF01494 FAD binding domain J4N38_RS02395 PF01571 Aminomethyltransferase folate-binding domain J4N38_RS02400 PF03937 Flavinator of succinate dehydrogenase J4N38_RS02405 PF00890 FAD binding domain J4N38_RS02405 PF02910 Fumarate reductase flavoprotein C-term J4N38_RS02410 PF08281 Sigma-70, region 4 J4N38_RS02410 PF04542 Sigma-70 region 2 J4N38_RS02415 PF03873 Anti sigma-E protein RseA, C-terminal domain J4N38_RS02415 PF03872 Anti sigma-E protein RseA, N-terminal domain J4N38_RS02420 PF03888 MucB/RseB N-terminal domain J4N38_RS02420 PF17188 MucB/RseB C-terminal domain J4N38_RS02430 PF00009 Elongation factor Tu GTP binding domain J4N38_RS02430 PF00679 Elongation factor G C-terminus J4N38_RS02430 PF03144 Elongation factor Tu domain 2 J4N38_RS02430 PF06421 GTP-binding protein LepA C-terminus J4N38_RS02435 PF10502 Signal peptidase, peptidase S26 J4N38_RS02440 PF14622 Ribonuclease-III-like J4N38_RS02440 PF00035 Double-stranded RNA binding motif J4N38_RS02445 PF01926 50S ribosome-binding GTPase J4N38_RS02445 PF07650 KH domain J4N38_RS02450 PF11967 Recombination protein O N terminal J4N38_RS02450 PF02565 Recombination protein O C terminal J4N38_RS02455 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4N38_RS02460 PF01648 4'-phosphopantetheinyl transferase superfamily J4N38_RS02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS02465 PF01627 Hpt domain J4N38_RS02465 PF00072 Response regulator receiver domain J4N38_RS02465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_RS02465 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS02465 PF00672 HAMP domain J4N38_RS02470 PF01938 TRAM domain J4N38_RS02470 PF05958 tRNA (Uracil-5-)-methyltransferase J4N38_RS02475 PF13291 ACT domain J4N38_RS02475 PF04607 Region found in RelA / SpoT proteins J4N38_RS02475 PF02824 TGS domain J4N38_RS02480 PF03819 MazG nucleotide pyrophosphohydrolase domain J4N38_RS02485 PF00117 Glutamine amidotransferase class-I J4N38_RS02485 PF06418 CTP synthase N-terminus J4N38_RS02490 PF03952 Enolase, N-terminal domain J4N38_RS02490 PF00113 Enolase, C-terminal TIM barrel domain J4N38_RS02495 PF01966 HD domain J4N38_RS02495 PF01743 Poly A polymerase head domain J4N38_RS02495 PF12627 Probable RNA and SrmB- binding site of polymerase A J4N38_RS02500 PF13401 AAA domain J4N38_RS02500 PF01471 Putative peptidoglycan binding domain J4N38_RS02505 PF16537 Type II secretion system protein B J4N38_RS02510 PF08239 Bacterial SH3 domain J4N38_RS02515 PF01384 Phosphate transporter family J4N38_RS02520 PF01865 Protein of unknown function DUF47 J4N38_RS02525 PF01928 CYTH domain J4N38_RS02530 PF07885 Ion channel J4N38_RS02530 PF00027 Cyclic nucleotide-binding domain J4N38_RS02535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS02535 PF00672 HAMP domain J4N38_RS02540 PF08335 GlnD PII-uridylyltransferase J4N38_RS02540 PF03710 Glutamate-ammonia ligase adenylyltransferase J4N38_RS02545 PF00294 pfkB family carbohydrate kinase J4N38_RS02545 PF01467 Cytidylyltransferase-like J4N38_RS02550 PF00072 Response regulator receiver domain J4N38_RS02550 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS02560 PF03737 Aldolase/RraA J4N38_RS02570 PF00696 Amino acid kinase family J4N38_RS02570 PF01842 ACT domain J4N38_RS02570 PF13840 ACT domain J4N38_RS02570 PF00742 Homoserine dehydrogenase J4N38_RS02570 PF03447 Homoserine dehydrogenase, NAD binding domain J4N38_RS02575 PF08544 GHMP kinases C terminal J4N38_RS02575 PF00288 GHMP kinases N terminal domain J4N38_RS02580 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_RS02580 PF14821 Threonine synthase N terminus J4N38_RS02585 PF03458 UPF0126 domain J4N38_RS02590 PF01497 Periplasmic binding protein J4N38_RS02600 PF01048 Phosphorylase superfamily J4N38_RS02605 PF00312 Ribosomal protein S15 J4N38_RS02610 PF01138 3' exoribonuclease family, domain 1 J4N38_RS02610 PF00575 S1 RNA binding domain J4N38_RS02610 PF03725 3' exoribonuclease family, domain 2 J4N38_RS02610 PF00013 KH domain J4N38_RS02610 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4N38_RS02615 PF13181 Tetratricopeptide repeat J4N38_RS02615 PF07719 Tetratricopeptide repeat J4N38_RS02625 PF01554 MatE J4N38_RS02630 PF00158 Sigma-54 interaction domain J4N38_RS02630 PF02954 Bacterial regulatory protein, Fis family J4N38_RS02630 PF00072 Response regulator receiver domain J4N38_RS02640 PF00248 Aldo/keto reductase family J4N38_RS02650 PF02976 DNA mismatch repair enzyme MutH J4N38_RS02655 PF00293 NUDIX domain J4N38_RS02660 PF02896 PEP-utilising enzyme, TIM barrel domain J4N38_RS02660 PF00391 PEP-utilising enzyme, mobile domain J4N38_RS02660 PF01590 GAF domain J4N38_RS02660 PF05524 PEP-utilising enzyme, N-terminal J4N38_RS02665 PF01925 Sulfite exporter TauE/SafE J4N38_RS02670 PF01790 Prolipoprotein diacylglyceryl transferase J4N38_RS02675 PF00303 Thymidylate synthase J4N38_RS02680 PF02690 Na+/Pi-cotransporter J4N38_RS02685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS02685 PF03466 LysR substrate binding domain J4N38_RS02690 PF01022 Bacterial regulatory protein, arsR family J4N38_RS02695 PF01649 Ribosomal protein S20 J4N38_RS02700 PF03023 Lipid II flippase MurJ J4N38_RS02705 PF01687 Riboflavin kinase J4N38_RS02705 PF06574 FAD synthetase J4N38_RS02710 PF00133 tRNA synthetases class I (I, L, M and V) J4N38_RS02710 PF08264 Anticodon-binding domain of tRNA J4N38_RS02710 PF06827 Zinc finger found in FPG and IleRS J4N38_RS02715 PF01252 Signal peptidase (SPase) II J4N38_RS02720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_RS02725 PF02401 LytB protein J4N38_RS02730 PF02554 Carbon starvation protein CstA J4N38_RS02740 PF13580 SIS domain J4N38_RS02745 PF03702 Anhydro-N-acetylmuramic acid kinase J4N38_RS02760 PF01418 Helix-turn-helix domain, rpiR family J4N38_RS02760 PF01380 SIS domain J4N38_RS02765 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N38_RS02770 PF00072 Response regulator receiver domain J4N38_RS02770 PF04397 LytTr DNA-binding domain J4N38_RS02775 PF06580 Histidine kinase J4N38_RS02775 PF07694 5TMR of 5TMR-LYT J4N38_RS02780 PF00793 DAHP synthetase I family J4N38_RS02785 PF01817 Chorismate mutase type II J4N38_RS02785 PF02153 Prephenate dehydrogenase J4N38_RS02790 PF04225 Opacity-associated protein A LysM-like domain J4N38_RS02790 PF01551 Peptidase family M23 J4N38_RS02795 PF07238 PilZ domain J4N38_RS02800 PF00005 ABC transporter J4N38_RS02800 PF12848 ABC transporter J4N38_RS02805 PF01464 Transglycosylase SLT domain J4N38_RS02805 PF14718 Soluble lytic murein transglycosylase L domain J4N38_RS02810 PF01371 Trp repressor protein J4N38_RS02815 PF01931 Protein of unknown function DUF84 J4N38_RS02820 PF00563 EAL domain J4N38_RS02820 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS02825 PF13416 Bacterial extracellular solute-binding protein J4N38_RS02830 PF01817 Chorismate mutase type II J4N38_RS02830 PF00800 Prephenate dehydratase J4N38_RS02835 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4N38_RS02840 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS02840 PF01464 Transglycosylase SLT domain J4N38_RS02845 PF13525 Outer membrane lipoprotein J4N38_RS02850 PF01479 S4 domain J4N38_RS02850 PF00849 RNA pseudouridylate synthase J4N38_RS02855 PF02578 Multi-copper polyphenol oxidoreductase laccase J4N38_RS02860 PF07724 AAA domain (Cdc48 subfamily) J4N38_RS02860 PF17871 AAA lid domain J4N38_RS02860 PF02861 Clp amino terminal domain, pathogenicity island component J4N38_RS02860 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_RS02860 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS02905 PF00459 Inositol monophosphatase family J4N38_RS02910 PF00588 SpoU rRNA Methylase family J4N38_RS02915 PF02082 Transcriptional regulator J4N38_RS02920 PF00266 Aminotransferase class-V J4N38_RS02925 PF01592 NifU-like N terminal domain J4N38_RS02930 PF01521 Iron-sulphur cluster biosynthesis J4N38_RS02935 PF00226 DnaJ domain J4N38_RS02935 PF07743 HSCB C-terminal oligomerisation domain J4N38_RS02940 PF00012 Hsp70 protein J4N38_RS02945 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS02950 PF04384 Iron-sulphur cluster assembly J4N38_RS02955 PF12404 Peptidase J4N38_RS02955 PF00883 Cytosol aminopeptidase family, catalytic domain J4N38_RS02960 PF00334 Nucleoside diphosphate kinase J4N38_RS02965 PF14492 Elongation Factor G, domain II J4N38_RS02965 PF03764 Elongation factor G, domain IV J4N38_RS02965 PF00009 Elongation factor Tu GTP binding domain J4N38_RS02965 PF03144 Elongation factor Tu domain 2 J4N38_RS02965 PF00679 Elongation factor G C-terminus J4N38_RS02970 PF03466 LysR substrate binding domain J4N38_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS02980 PF03466 LysR substrate binding domain J4N38_RS02985 PF00501 AMP-binding enzyme J4N38_RS02990 PF02805 Metal binding domain of Ada J4N38_RS02990 PF12833 Helix-turn-helix domain J4N38_RS03020 PF04972 BON domain J4N38_RS03020 PF00263 Bacterial type II and III secretion system protein J4N38_RS03020 PF13629 Pilus formation protein N terminal region J4N38_RS03050 PF00437 Type II/IV secretion system protein J4N38_RS03070 PF02417 Chromate transporter J4N38_RS03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS03075 PF03466 LysR substrate binding domain J4N38_RS03085 PF12833 Helix-turn-helix domain J4N38_RS03090 PF02056 Family 4 glycosyl hydrolase J4N38_RS03090 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4N38_RS03110 PF16363 GDP-mannose 4,6 dehydratase J4N38_RS03115 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J4N38_RS03115 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J4N38_RS03120 PF10509 Galactokinase galactose-binding signature J4N38_RS03120 PF08544 GHMP kinases C terminal J4N38_RS03120 PF00288 GHMP kinases N terminal domain J4N38_RS03125 PF01263 Aldose 1-epimerase J4N38_RS03130 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS03145 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS03145 PF00563 EAL domain J4N38_RS03145 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS03150 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS03165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_RS03165 PF02378 Phosphotransferase system, EIIC J4N38_RS03165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_RS03175 PF14602 Hexapeptide repeat of succinyl-transferase J4N38_RS03175 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle J4N38_RS03180 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4N38_RS03180 PF00578 AhpC/TSA family J4N38_RS03185 PF03466 LysR substrate binding domain J4N38_RS03185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS03190 PF01274 Malate synthase J4N38_RS03195 PF00463 Isocitrate lyase family J4N38_RS03215 PF00571 CBS domain J4N38_RS03220 PF02547 Queuosine biosynthesis protein J4N38_RS03225 PF01702 Queuine tRNA-ribosyltransferase J4N38_RS03230 PF02699 Preprotein translocase subunit J4N38_RS03235 PF13721 SecD export protein N-terminal TM region J4N38_RS03235 PF02355 Protein export membrane protein J4N38_RS03235 PF07549 SecD/SecF GG Motif J4N38_RS03240 PF02355 Protein export membrane protein J4N38_RS03240 PF07549 SecD/SecF GG Motif J4N38_RS03250 PF03411 Penicillin-insensitive murein endopeptidase J4N38_RS03255 PF01609 Transposase DDE domain J4N38_RS03255 PF13006 Insertion element 4 transposase N-terminal J4N38_RS03260 PF12838 4Fe-4S dicluster domain J4N38_RS03265 PF01136 Peptidase family U32 J4N38_RS03265 PF16325 Peptidase family U32 C-terminal domain J4N38_RS03270 PF04381 Putative exonuclease, RdgC J4N38_RS03275 PF00072 Response regulator receiver domain J4N38_RS03275 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS03280 PF00989 PAS fold J4N38_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS03280 PF11808 Phosphate regulon sensor protein PhoR J4N38_RS03280 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS03285 PF12849 PBP superfamily domain J4N38_RS03290 PF02541 Ppx/GppA phosphatase family J4N38_RS03295 PF13089 Polyphosphate kinase N-terminal domain J4N38_RS03295 PF13090 Polyphosphate kinase C-terminal domain 2 J4N38_RS03295 PF02503 Polyphosphate kinase middle domain J4N38_RS03295 PF17941 Polyphosphate kinase C-terminal domain 1 J4N38_RS03300 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS03310 PF00005 ABC transporter J4N38_RS03315 PF01895 PhoU domain J4N38_RS03320 PF03976 Polyphosphate kinase 2 (PPK2) J4N38_RS03325 PF03932 CutC family J4N38_RS03330 PF13006 Insertion element 4 transposase N-terminal J4N38_RS03330 PF01609 Transposase DDE domain J4N38_RS03335 PF07130 YebG protein J4N38_RS03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS03340 PF03466 LysR substrate binding domain J4N38_RS03350 PF17946 RecC C-terminal domain J4N38_RS03355 PF12705 PD-(D/E)XK nuclease superfamily J4N38_RS03355 PF13361 UvrD-like helicase C-terminal domain J4N38_RS03355 PF00580 UvrD/REP helicase N-terminal domain J4N38_RS03360 PF13538 UvrD-like helicase C-terminal domain J4N38_RS03370 PF00696 Amino acid kinase family J4N38_RS03370 PF00583 Acetyltransferase (GNAT) family J4N38_RS03380 PF03562 MltA specific insert domain J4N38_RS03380 PF06725 3D domain J4N38_RS03385 PF00899 ThiF family J4N38_RS03390 PF02657 Fe-S metabolism associated domain J4N38_RS03395 PF04055 Radical SAM superfamily J4N38_RS03400 PF13464 Domain of unknown function (DUF4115) J4N38_RS03405 PF04551 GcpE protein J4N38_RS03410 PF03129 Anticodon binding domain J4N38_RS03410 PF13393 Histidyl-tRNA synthetase J4N38_RS03415 PF09976 Tetratricopeptide repeat-like domain J4N38_RS03420 PF13360 PQQ-like domain J4N38_RS03425 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4N38_RS03425 PF01926 50S ribosome-binding GTPase J4N38_RS03430 PF02272 DHHA1 domain J4N38_RS03430 PF01411 tRNA synthetases class II (A) J4N38_RS03430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N38_RS03445 PF13742 OB-fold nucleic acid binding domain J4N38_RS03445 PF02601 Exonuclease VII, large subunit J4N38_RS03450 PF00478 IMP dehydrogenase / GMP reductase domain J4N38_RS03450 PF00571 CBS domain J4N38_RS03455 PF00117 Glutamine amidotransferase class-I J4N38_RS03455 PF00958 GMP synthase C terminal domain J4N38_RS03455 PF02540 NAD synthase J4N38_RS03460 PF06483 Chitinase C J4N38_RS03460 PF00704 Glycosyl hydrolases family 18 J4N38_RS03465 PF01184 GPR1/FUN34/yaaH family J4N38_RS03470 PF01235 Sodium:alanine symporter family J4N38_RS03475 PF01266 FAD dependent oxidoreductase J4N38_RS03480 PF03466 LysR substrate binding domain J4N38_RS03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS03485 PF07885 Ion channel J4N38_RS03495 PF01584 CheW-like domain J4N38_RS03495 PF00072 Response regulator receiver domain J4N38_RS03500 PF01553 Acyltransferase J4N38_RS03505 PF05922 Peptidase inhibitor I9 J4N38_RS03505 PF00082 Subtilase family J4N38_RS03515 PF13840 ACT domain J4N38_RS03515 PF00696 Amino acid kinase family J4N38_RS03520 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS03520 PF01590 GAF domain J4N38_RS03520 PF00360 Phytochrome region J4N38_RS03520 PF00563 EAL domain J4N38_RS03525 PF07694 5TMR of 5TMR-LYT J4N38_RS03525 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS03535 PF03448 MgtE intracellular N domain J4N38_RS03535 PF01769 Divalent cation transporter J4N38_RS03535 PF00571 CBS domain J4N38_RS03540 PF08443 RimK-like ATP-grasp domain J4N38_RS03540 PF18030 RimK PreATP-grasp domain J4N38_RS03545 PF08443 RimK-like ATP-grasp domain J4N38_RS03545 PF18030 RimK PreATP-grasp domain J4N38_RS03560 PF01668 SmpB protein J4N38_RS03565 PF03364 Polyketide cyclase / dehydrase and lipid transport J4N38_RS03570 PF03658 RnfH family Ubiquitin J4N38_RS03575 PF04355 SmpA / OmlA family J4N38_RS03580 PF02463 RecF/RecN/SMC N terminal domain J4N38_RS03585 PF01513 ATP-NAD kinase J4N38_RS03590 PF01025 GrpE J4N38_RS03595 PF00375 Sodium:dicarboxylate symporter family J4N38_RS03600 PF00012 Hsp70 protein J4N38_RS03605 PF00684 DnaJ central domain J4N38_RS03605 PF01556 DnaJ C terminal domain J4N38_RS03605 PF00226 DnaJ domain J4N38_RS03635 PF03806 AbgT putative transporter family J4N38_RS03640 PF14437 MafB19-like deaminase J4N38_RS03645 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS03645 PF01464 Transglycosylase SLT domain J4N38_RS03650 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4N38_RS03650 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4N38_RS03650 PF02769 AIR synthase related protein, C-terminal domain J4N38_RS03665 PF06786 Uncharacterised protein family (UPF0253) J4N38_RS03675 PF00551 Formyl transferase J4N38_RS03680 PF00586 AIR synthase related protein, N-terminal domain J4N38_RS03680 PF02769 AIR synthase related protein, C-terminal domain J4N38_RS03690 PF00849 RNA pseudouridylate synthase J4N38_RS03690 PF01479 S4 domain J4N38_RS03695 PF01713 Smr domain J4N38_RS03715 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain J4N38_RS03715 PF03173 Putative carbohydrate binding domain J4N38_RS03715 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N38_RS03715 PF02838 Glycosyl hydrolase family 20, domain 2 J4N38_RS03720 PF00854 POT family J4N38_RS03725 PF00733 Asparagine synthase J4N38_RS03725 PF13537 Glutamine amidotransferase domain J4N38_RS03730 PF02254 TrkA-N domain J4N38_RS03730 PF00999 Sodium/hydrogen exchanger family J4N38_RS03735 PF00480 ROK family J4N38_RS03735 PF01047 MarR family J4N38_RS03740 PF01979 Amidohydrolase family J4N38_RS03745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N38_RS03745 PF00367 phosphotransferase system, EIIB J4N38_RS03745 PF02378 Phosphotransferase system, EIIC J4N38_RS03750 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4N38_RS03750 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N38_RS03755 PF01475 Ferric uptake regulator family J4N38_RS03765 PF13609 Gram-negative porin J4N38_RS03780 PF16200 C-terminal region of band_7 J4N38_RS03780 PF01145 SPFH domain / Band 7 family J4N38_RS03785 PF00085 Thioredoxin J4N38_RS03790 PF00106 short chain dehydrogenase J4N38_RS03795 PF01370 NAD dependent epimerase/dehydratase family J4N38_RS03795 PF08338 Domain of unknown function (DUF1731) J4N38_RS03800 PF07556 Protein of unknown function (DUF1538) J4N38_RS03805 PF07556 Protein of unknown function (DUF1538) J4N38_RS03820 PF12850 Calcineurin-like phosphoesterase superfamily domain J4N38_RS03835 PF17323 Trans-membrane regulatory protein ToxS J4N38_RS03840 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS03845 PF00183 Hsp90 protein J4N38_RS03850 PF05191 Adenylate kinase, active site lid J4N38_RS03855 PF00762 Ferrochelatase J4N38_RS03860 PF01223 DNA/RNA non-specific endonuclease J4N38_RS03865 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4N38_RS03865 PF01367 5'-3' exonuclease, C-terminal SAM fold J4N38_RS03870 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J4N38_RS03870 PF03641 Possible lysine decarboxylase J4N38_RS03870 PF11892 Domain of unknown function (DUF3412) J4N38_RS03875 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS03885 PF14489 QueF-like protein J4N38_RS03885 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4N38_RS03890 PF07348 Syd protein (SUKH-2) J4N38_RS03895 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) J4N38_RS03910 PF01546 Peptidase family M20/M25/M40 J4N38_RS03910 PF07687 Peptidase dimerisation domain J4N38_RS03915 PF03960 ArsC family J4N38_RS03940 PF02335 Cytochrome c552 J4N38_RS03950 PF13247 4Fe-4S dicluster domain J4N38_RS03950 PF00037 4Fe-4S binding domain J4N38_RS03955 PF03916 Polysulphide reductase, NrfD J4N38_RS03960 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4N38_RS03960 PF01578 Cytochrome C assembly protein J4N38_RS03965 PF08534 Redoxin J4N38_RS03970 PF03918 Cytochrome C biogenesis protein J4N38_RS03975 PF11143 Protein of unknown function (DUF2919) J4N38_RS03980 PF04261 Dyp-type peroxidase family J4N38_RS03985 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J4N38_RS03995 PF00579 tRNA synthetases class I (W and Y) J4N38_RS04000 PF01476 LysM domain J4N38_RS04000 PF08525 Opacity-associated protein A N-terminal motif J4N38_RS04000 PF01551 Peptidase family M23 J4N38_RS04005 PF07196 Flagellin hook IN motif J4N38_RS04005 PF00669 Bacterial flagellin N-terminal helical region J4N38_RS04005 PF00700 Bacterial flagellin C-terminal helical region J4N38_RS04010 PF07196 Flagellin hook IN motif J4N38_RS04010 PF00669 Bacterial flagellin N-terminal helical region J4N38_RS04010 PF00700 Bacterial flagellin C-terminal helical region J4N38_RS04015 PF00700 Bacterial flagellin C-terminal helical region J4N38_RS04015 PF07196 Flagellin hook IN motif J4N38_RS04015 PF00669 Bacterial flagellin N-terminal helical region J4N38_RS04020 PF03646 FlaG protein J4N38_RS04025 PF07196 Flagellin hook IN motif J4N38_RS04025 PF07195 Flagellar hook-associated protein 2 C-terminus J4N38_RS04025 PF02465 Flagellar hook-associated protein 2 N-terminus J4N38_RS04035 PF02561 Flagellar protein FliS J4N38_RS04040 PF02954 Bacterial regulatory protein, Fis family J4N38_RS04040 PF00158 Sigma-54 interaction domain J4N38_RS04040 PF06490 Flagellar regulatory protein FleQ J4N38_RS04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS04045 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS04045 PF13188 PAS domain J4N38_RS04050 PF00158 Sigma-54 interaction domain J4N38_RS04050 PF02954 Bacterial regulatory protein, Fis family J4N38_RS04050 PF00072 Response regulator receiver domain J4N38_RS04055 PF02049 Flagellar hook-basal body complex protein FliE J4N38_RS04060 PF08345 Flagellar M-ring protein C-terminal J4N38_RS04060 PF01514 Secretory protein of YscJ/FliF family J4N38_RS04065 PF14842 FliG N-terminal domain J4N38_RS04065 PF01706 FliG C-terminal domain J4N38_RS04065 PF14841 FliG middle domain J4N38_RS04075 PF18269 T3SS EscN ATPase C-terminal domain J4N38_RS04075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_RS04095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N38_RS04095 PF02154 Flagellar motor switch protein FliM J4N38_RS04100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N38_RS04105 PF04347 Flagellar biosynthesis protein, FliO J4N38_RS04110 PF00813 FliP family J4N38_RS04115 PF01313 Bacterial export proteins, family 3 J4N38_RS04120 PF01311 Bacterial export proteins, family 1 J4N38_RS04125 PF01312 FlhB HrpN YscU SpaS Family J4N38_RS04130 PF01713 Smr domain J4N38_RS04135 PF05175 Methyltransferase small domain J4N38_RS04140 PF01264 Chorismate synthase J4N38_RS04150 PF03458 UPF0126 domain J4N38_RS04155 PF04315 Elongation factor P hydroxylase J4N38_RS04170 PF08891 YfcL protein J4N38_RS04175 PF01266 FAD dependent oxidoreductase J4N38_RS04175 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J4N38_RS04180 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N38_RS04180 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N38_RS04185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N38_RS04185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_RS04185 PF11890 Domain of unknown function (DUF3410) J4N38_RS04190 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N38_RS04190 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N38_RS04200 PF01416 tRNA pseudouridine synthase J4N38_RS04205 PF01039 Carboxyl transferase domain J4N38_RS04205 PF17848 Acetyl-coA carboxylase zinc finger domain J4N38_RS04210 PF02875 Mur ligase family, glutamate ligase domain J4N38_RS04210 PF08245 Mur ligase middle domain J4N38_RS04215 PF05036 Sporulation related domain J4N38_RS04220 PF02674 Colicin V production protein J4N38_RS04225 PF00156 Phosphoribosyl transferase domain J4N38_RS04230 PF00950 ABC 3 transport family J4N38_RS04235 PF00005 ABC transporter J4N38_RS04240 PF01297 Zinc-uptake complex component A periplasmic J4N38_RS04245 PF12833 Helix-turn-helix domain J4N38_RS04245 PF02311 AraC-like ligand binding domain J4N38_RS04250 PF04023 FeoA domain J4N38_RS04255 PF07664 Ferrous iron transport protein B C terminus J4N38_RS04255 PF02421 Ferrous iron transport protein B J4N38_RS04255 PF07670 Nucleoside recognition J4N38_RS04270 PF05746 DALR anticodon binding domain J4N38_RS04270 PF03485 Arginyl tRNA synthetase N terminal domain J4N38_RS04270 PF00750 tRNA synthetases class I (R) J4N38_RS04275 PF06185 YecM protein J4N38_RS04280 PF05193 Peptidase M16 inactive domain J4N38_RS04280 PF00675 Insulinase (Peptidase family M16) J4N38_RS04285 PF00300 Histidine phosphatase superfamily (branch 1) J4N38_RS04290 PF00771 FHIPEP family J4N38_RS04295 PF00448 SRP54-type protein, GTPase domain J4N38_RS04300 PF10609 NUBPL iron-transfer P-loop NTPase J4N38_RS04305 PF04542 Sigma-70 region 2 J4N38_RS04305 PF04539 Sigma-70 region 3 J4N38_RS04305 PF04545 Sigma-70, region 4 J4N38_RS04310 PF00072 Response regulator receiver domain J4N38_RS04315 PF04344 Chemotaxis phosphatase, CheZ J4N38_RS04320 PF00072 Response regulator receiver domain J4N38_RS04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS04320 PF01627 Hpt domain J4N38_RS04320 PF02895 Signal transducing histidine kinase, homodimeric domain J4N38_RS04320 PF01584 CheW-like domain J4N38_RS04325 PF01339 CheB methylesterase J4N38_RS04325 PF00072 Response regulator receiver domain J4N38_RS04330 PF13614 AAA domain J4N38_RS04340 PF01584 CheW-like domain J4N38_RS04350 PF00005 ABC transporter J4N38_RS04355 PF03379 CcmB protein J4N38_RS04360 PF01578 Cytochrome C assembly protein J4N38_RS04365 PF04995 Heme exporter protein D (CcmD) J4N38_RS04370 PF03100 CcmE J4N38_RS04375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4N38_RS04375 PF01578 Cytochrome C assembly protein J4N38_RS04380 PF08534 Redoxin J4N38_RS04385 PF03918 Cytochrome C biogenesis protein J4N38_RS04390 PF03918 Cytochrome C biogenesis protein J4N38_RS04395 PF04333 MlaA lipoprotein J4N38_RS04400 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N38_RS04405 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N38_RS04415 PF04542 Sigma-70 region 2 J4N38_RS04415 PF08281 Sigma-70, region 4 J4N38_RS04420 PF02803 Thiolase, C-terminal domain J4N38_RS04420 PF00108 Thiolase, N-terminal domain J4N38_RS04425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4N38_RS04425 PF00378 Enoyl-CoA hydratase/isomerase J4N38_RS04425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4N38_RS04430 PF00881 Nitroreductase family J4N38_RS04435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS04435 PF03466 LysR substrate binding domain J4N38_RS04440 PF00072 Response regulator receiver domain J4N38_RS04445 PF04304 Protein of unknown function (DUF454) J4N38_RS04450 PF00156 Phosphoribosyl transferase domain J4N38_RS04455 PF12169 DNA polymerase III subunits gamma and tau domain III J4N38_RS04455 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J4N38_RS04455 PF12170 DNA polymerase III tau subunit V interacting with alpha J4N38_RS04460 PF02575 YbaB/EbfC DNA-binding family J4N38_RS04465 PF13662 Toprim domain J4N38_RS04465 PF02132 RecR protein J4N38_RS04470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4N38_RS04470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4N38_RS04485 PF00072 Response regulator receiver domain J4N38_RS04485 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS04490 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS04490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS04490 PF00672 HAMP domain J4N38_RS04495 PF01547 Bacterial extracellular solute-binding protein J4N38_RS04500 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS04505 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS04510 PF00005 ABC transporter J4N38_RS04510 PF17912 MalK OB fold domain J4N38_RS04510 PF03459 TOBE domain J4N38_RS04515 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_RS04520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N38_RS04525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_RS04535 PF00158 Sigma-54 interaction domain J4N38_RS04535 PF00072 Response regulator receiver domain J4N38_RS04535 PF02954 Bacterial regulatory protein, Fis family J4N38_RS04540 PF02743 Cache domain J4N38_RS04540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS04540 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS04545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_RS04545 PF05697 Bacterial trigger factor protein (TF) J4N38_RS04545 PF05698 Bacterial trigger factor protein (TF) C-terminus J4N38_RS04550 PF00574 Clp protease J4N38_RS04555 PF07724 AAA domain (Cdc48 subfamily) J4N38_RS04555 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_RS04555 PF06689 ClpX C4-type zinc finger J4N38_RS04560 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS04560 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4N38_RS04560 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N38_RS04565 PF00216 Bacterial DNA-binding protein J4N38_RS04570 PF13145 PPIC-type PPIASE domain J4N38_RS04580 PF02224 Cytidylate kinase J4N38_RS04585 PF00575 S1 RNA binding domain J4N38_RS04590 PF00216 Bacterial DNA-binding protein J4N38_RS04595 PF06305 Lipopolysaccharide assembly protein A domain J4N38_RS04600 PF18073 Rubredoxin metal binding domain J4N38_RS04605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4N38_RS04610 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J4N38_RS04620 PF03466 LysR substrate binding domain J4N38_RS04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS04635 PF02653 Branched-chain amino acid transport system / permease component J4N38_RS04640 PF00005 ABC transporter J4N38_RS04645 PF01207 Dihydrouridine synthase (Dus) J4N38_RS04650 PF02810 SEC-C motif J4N38_RS04650 PF07516 SecA Wing and Scaffold domain J4N38_RS04650 PF01043 SecA preprotein cross-linking domain J4N38_RS04650 PF07517 SecA DEAD-like domain J4N38_RS04655 PF03548 Outer membrane lipoprotein carrier protein LolA J4N38_RS04660 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS04660 PF12002 MgsA AAA+ ATPase C terminal J4N38_RS04660 PF16193 AAA C-terminal domain J4N38_RS04665 PF02403 Seryl-tRNA synthetase N-terminal domain J4N38_RS04665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N38_RS04670 PF00710 Asparaginase, N-terminal J4N38_RS04670 PF17763 Glutaminase/Asparaginase C-terminal domain J4N38_RS04675 PF01343 Peptidase family S49 J4N38_RS04680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N38_RS04680 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS04685 PF01842 ACT domain J4N38_RS04685 PF00551 Formyl transferase J4N38_RS04695 PF13307 Helicase C-terminal domain J4N38_RS04695 PF04851 Type III restriction enzyme, res subunit J4N38_RS04700 PF00814 Glycoprotease family J4N38_RS04715 PF00561 alpha/beta hydrolase fold J4N38_RS04720 PF00501 AMP-binding enzyme J4N38_RS04720 PF13193 AMP-binding enzyme C-terminal domain J4N38_RS04725 PF01612 3'-5' exonuclease J4N38_RS04725 PF00570 HRDC domain J4N38_RS04730 PF01740 STAS domain J4N38_RS04730 PF00916 Sulfate permease family J4N38_RS04735 PF00575 S1 RNA binding domain J4N38_RS04735 PF10150 Ribonuclease E/G family J4N38_RS04735 PF12111 Polyribonucleotide phosphorylase C terminal J4N38_RS04740 PF01479 S4 domain J4N38_RS04740 PF00849 RNA pseudouridylate synthase J4N38_RS04745 PF02545 Maf-like protein J4N38_RS04750 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4N38_RS04755 PF01783 Ribosomal L32p protein family J4N38_RS04760 PF02504 Fatty acid synthesis protein J4N38_RS04765 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N38_RS04765 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N38_RS04770 PF00698 Acyl transferase domain J4N38_RS04780 PF00550 Phosphopantetheine attachment site J4N38_RS04785 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N38_RS04785 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N38_RS04790 PF01063 Amino-transferase class IV J4N38_RS04795 PF02618 YceG-like family J4N38_RS04800 PF02223 Thymidylate kinase J4N38_RS04805 PF09115 DNA polymerase III, delta subunit, C terminal J4N38_RS04810 PF01026 TatD related DNase J4N38_RS04815 PF00367 phosphotransferase system, EIIB J4N38_RS04815 PF02378 Phosphotransferase system, EIIC J4N38_RS04830 PF00209 Sodium:neurotransmitter symporter family J4N38_RS04845 PF01734 Patatin-like phospholipase J4N38_RS04850 PF11066 Protein of unknown function (DUF2867) J4N38_RS04850 PF13460 NAD(P)H-binding J4N38_RS04870 PF02075 Crossover junction endodeoxyribonuclease RuvC J4N38_RS04875 PF00672 HAMP domain J4N38_RS04875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS04875 PF02203 Tar ligand binding domain homologue J4N38_RS04880 PF01330 RuvA N terminal domain J4N38_RS04880 PF07499 RuvA, C-terminal domain J4N38_RS04885 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4N38_RS04885 PF17864 RuvB AAA lid domain J4N38_RS04885 PF05491 RuvB C-terminal winged helix domain J4N38_RS04890 PF01654 Cytochrome bd terminal oxidase subunit I J4N38_RS04895 PF02322 Cytochrome bd terminal oxidase subunit II J4N38_RS04900 PF08173 Membrane bound YbgT-like protein J4N38_RS04910 PF03061 Thioesterase superfamily J4N38_RS04915 PF01618 MotA/TolQ/ExbB proton channel family J4N38_RS04920 PF02472 Biopolymer transport protein ExbD/TolR J4N38_RS04930 PF04052 TolB amino-terminal domain J4N38_RS04930 PF07676 WD40-like Beta Propeller Repeat J4N38_RS04935 PF00691 OmpA family J4N38_RS04940 PF16331 TolA binding protein trimerisation J4N38_RS04940 PF13174 Tetratricopeptide repeat J4N38_RS04945 PF02445 Quinolinate synthetase A protein J4N38_RS04960 PF09308 LuxQ, periplasmic J4N38_RS04960 PF00072 Response regulator receiver domain J4N38_RS04960 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS04960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS04965 PF06610 L-alanine exporter J4N38_RS04975 PF07728 AAA domain (dynein-related subfamily) J4N38_RS04975 PF12102 Domain of unknown function (DUF3578) J4N38_RS04995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N38_RS05000 PF01161 Phosphatidylethanolamine-binding protein J4N38_RS05010 PF01238 Phosphomannose isomerase type I J4N38_RS05015 PF00480 ROK family J4N38_RS05030 PF16295 Tetracyclin repressor-like, C-terminal domain J4N38_RS05030 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS05035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N38_RS05035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N38_RS05035 PF02770 Acyl-CoA dehydrogenase, middle domain J4N38_RS05035 PF09317 Domain of unknown function (DUF1974) J4N38_RS05040 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4N38_RS05040 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4N38_RS05040 PF07055 Enoyl reductase FAD binding domain J4N38_RS05050 PF03372 Endonuclease/Exonuclease/phosphatase family J4N38_RS05055 PF00672 HAMP domain J4N38_RS05055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS05060 PF08007 Cupin superfamily protein J4N38_RS05065 PF10689 Protein of unknown function (DUF2496) J4N38_RS05075 PF01925 Sulfite exporter TauE/SafE J4N38_RS05080 PF13307 Helicase C-terminal domain J4N38_RS05080 PF06733 DEAD_2 J4N38_RS05090 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N38_RS05095 PF00202 Aminotransferase class-III J4N38_RS05100 PF04055 Radical SAM superfamily J4N38_RS05100 PF06968 Biotin and Thiamin Synthesis associated domain J4N38_RS05105 PF00155 Aminotransferase class I and II J4N38_RS05110 PF08241 Methyltransferase domain J4N38_RS05110 PF12697 Alpha/beta hydrolase family J4N38_RS05125 PF01435 Peptidase family M48 J4N38_RS05160 PF16036 Chalcone isomerase-like J4N38_RS05170 PF00206 Lyase J4N38_RS05170 PF08328 Adenylosuccinate lyase C-terminal J4N38_RS05175 PF04356 Protein of unknown function (DUF489) J4N38_RS05190 PF00294 pfkB family carbohydrate kinase J4N38_RS05195 PF00816 H-NS histone family J4N38_RS05200 PF03553 Na+/H+ antiporter family J4N38_RS05205 PF08029 HisG, C-terminal domain J4N38_RS05205 PF01634 ATP phosphoribosyltransferase J4N38_RS05210 PF00815 Histidinol dehydrogenase J4N38_RS05215 PF00155 Aminotransferase class I and II J4N38_RS05220 PF00475 Imidazoleglycerol-phosphate dehydratase J4N38_RS05220 PF08645 Polynucleotide kinase 3 phosphatase J4N38_RS05225 PF00117 Glutamine amidotransferase class-I J4N38_RS05230 PF00977 Histidine biosynthesis protein J4N38_RS05235 PF00977 Histidine biosynthesis protein J4N38_RS05240 PF01502 Phosphoribosyl-AMP cyclohydrolase J4N38_RS05240 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J4N38_RS05245 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS05245 PF00563 EAL domain J4N38_RS05245 PF13426 PAS domain J4N38_RS05250 PF09456 RcsC Alpha-Beta-Loop (ABL) J4N38_RS05250 PF00072 Response regulator receiver domain J4N38_RS05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS05250 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS05260 PF00072 Response regulator receiver domain J4N38_RS05270 PF02833 DHHA2 domain J4N38_RS05270 PF01368 DHH family J4N38_RS05280 PF00005 ABC transporter J4N38_RS05285 PF00005 ABC transporter J4N38_RS05285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS05290 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_RS05290 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS05300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS05305 PF02954 Bacterial regulatory protein, Fis family J4N38_RS05305 PF00158 Sigma-54 interaction domain J4N38_RS05310 PF04012 PspA/IM30 family J4N38_RS05315 PF06667 Phage shock protein B J4N38_RS05330 PF13533 Biotin-lipoyl like J4N38_RS05335 PF00873 AcrB/AcrD/AcrF family J4N38_RS05340 PF03352 Methyladenine glycosylase J4N38_RS05345 PF03280 Proteobacterial lipase chaperone protein J4N38_RS05350 PF00561 alpha/beta hydrolase fold J4N38_RS05355 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N38_RS05360 PF13396 Phospholipase_D-nuclease N-terminal J4N38_RS05360 PF13091 PLD-like domain J4N38_RS05365 PF00209 Sodium:neurotransmitter symporter family J4N38_RS05370 PF00849 RNA pseudouridylate synthase J4N38_RS05375 PF10672 S-adenosylmethionine-dependent methyltransferase J4N38_RS05375 PF17785 PUA-like domain J4N38_RS05385 PF01066 CDP-alcohol phosphatidyltransferase J4N38_RS05390 PF00005 ABC transporter J4N38_RS05395 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS05400 PF13416 Bacterial extracellular solute-binding protein J4N38_RS05410 PF06945 Protein of unknown function (DUF1289) J4N38_RS05425 PF03795 YCII-related domain J4N38_RS05430 PF03061 Thioesterase superfamily J4N38_RS05435 PF04279 Intracellular septation protein A J4N38_RS05445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS05445 PF00072 Response regulator receiver domain J4N38_RS05450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS05450 PF00072 Response regulator receiver domain J4N38_RS05455 PF17327 Acyl homoserine lactone synthase J4N38_RS05460 PF00216 Bacterial DNA-binding protein J4N38_RS05465 PF04269 Protein of unknown function, DUF440 J4N38_RS05470 PF09285 Elongation factor P, C-terminal J4N38_RS05470 PF08207 Elongation factor P (EF-P) KOW-like domain J4N38_RS05470 PF01132 Elongation factor P (EF-P) OB domain J4N38_RS05480 PF03104 DNA polymerase family B, exonuclease domain J4N38_RS05480 PF00136 DNA polymerase family B J4N38_RS05495 PF00072 Response regulator receiver domain J4N38_RS05495 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS05500 PF02151 UvrB/uvrC motif J4N38_RS05500 PF01541 GIY-YIG catalytic domain J4N38_RS05500 PF08459 UvrC Helix-hairpin-helix N-terminal J4N38_RS05505 PF01066 CDP-alcohol phosphatidyltransferase J4N38_RS05530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N38_RS05540 PF00266 Aminotransferase class-V J4N38_RS05545 PF12729 Four helix bundle sensory module for signal transduction J4N38_RS05545 PF00672 HAMP domain J4N38_RS05545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS05550 PF11842 Domain of unknown function (DUF3362) J4N38_RS05550 PF04055 Radical SAM superfamily J4N38_RS05550 PF08497 Radical SAM N-terminal J4N38_RS05555 PF00563 EAL domain J4N38_RS05555 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS05555 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS05570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS05570 PF03466 LysR substrate binding domain J4N38_RS05575 PF08267 Cobalamin-independent synthase, N-terminal domain J4N38_RS05575 PF01717 Cobalamin-independent synthase, Catalytic domain J4N38_RS05585 PF02566 OsmC-like protein J4N38_RS05590 PF01047 MarR family J4N38_RS05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS05600 PF03466 LysR substrate binding domain J4N38_RS05625 PF02627 Carboxymuconolactone decarboxylase family J4N38_RS05650 PF04116 Fatty acid hydroxylase superfamily J4N38_RS05660 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4N38_RS05660 PF12833 Helix-turn-helix domain J4N38_RS05675 PF00012 Hsp70 protein J4N38_RS05680 PF00012 Hsp70 protein J4N38_RS05715 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4N38_RS05715 PF00270 DEAD/DEAH box helicase J4N38_RS05715 PF11898 Domain of unknown function (DUF3418) J4N38_RS05715 PF04408 Helicase associated domain (HA2) J4N38_RS05715 PF00271 Helicase conserved C-terminal domain J4N38_RS05730 PF00290 Tryptophan synthase alpha chain J4N38_RS05735 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_RS05740 PF00218 Indole-3-glycerol phosphate synthase J4N38_RS05740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4N38_RS05745 PF02885 Glycosyl transferase family, helical bundle domain J4N38_RS05745 PF00591 Glycosyl transferase family, a/b domain J4N38_RS05750 PF00117 Glutamine amidotransferase class-I J4N38_RS05755 PF00425 chorismate binding enzyme J4N38_RS05755 PF04715 Anthranilate synthase component I, N terminal region J4N38_RS05760 PF08056 Tryptophan operon leader peptide J4N38_RS05765 PF02811 PHP domain J4N38_RS05770 PF01300 Telomere recombination J4N38_RS05780 PF00563 EAL domain J4N38_RS05780 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS05780 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS05785 PF01479 S4 domain J4N38_RS05785 PF00849 RNA pseudouridylate synthase J4N38_RS05790 PF02567 Phenazine biosynthesis-like protein J4N38_RS05795 PF00005 ABC transporter J4N38_RS05795 PF00664 ABC transporter transmembrane region J4N38_RS05800 PF00005 ABC transporter J4N38_RS05800 PF00664 ABC transporter transmembrane region J4N38_RS05805 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS05815 PF00266 Aminotransferase class-V J4N38_RS05820 PF00675 Insulinase (Peptidase family M16) J4N38_RS05820 PF05193 Peptidase M16 inactive domain J4N38_RS05830 PF02698 DUF218 domain J4N38_RS05840 PF00390 Malic enzyme, N-terminal domain J4N38_RS05840 PF03949 Malic enzyme, NAD binding domain J4N38_RS05845 PF11898 Domain of unknown function (DUF3418) J4N38_RS05845 PF00270 DEAD/DEAH box helicase J4N38_RS05845 PF04408 Helicase associated domain (HA2) J4N38_RS05845 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4N38_RS05845 PF00271 Helicase conserved C-terminal domain J4N38_RS05860 PF00155 Aminotransferase class I and II J4N38_RS05865 PF00672 HAMP domain J4N38_RS05865 PF01966 HD domain J4N38_RS05875 PF00155 Aminotransferase class I and II J4N38_RS05875 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS05885 PF00152 tRNA synthetases class II (D, K and N) J4N38_RS05885 PF01336 OB-fold nucleic acid binding domain J4N38_RS05890 PF00672 HAMP domain J4N38_RS05890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS05890 PF12729 Four helix bundle sensory module for signal transduction J4N38_RS05895 PF01242 6-pyruvoyl tetrahydropterin synthase J4N38_RS05900 PF03222 Tryptophan/tyrosine permease family J4N38_RS05910 PF03315 Serine dehydratase beta chain J4N38_RS05910 PF03313 Serine dehydratase alpha chain J4N38_RS05915 PF03222 Tryptophan/tyrosine permease family J4N38_RS05920 PF00293 NUDIX domain J4N38_RS05930 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS05930 PF00072 Response regulator receiver domain J4N38_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS05930 PF09308 LuxQ, periplasmic J4N38_RS05935 PF04715 Anthranilate synthase component I, N terminal region J4N38_RS05935 PF00425 chorismate binding enzyme J4N38_RS05950 PF04317 YcjX-like family, DUF463 J4N38_RS05955 PF05128 Domain of unknown function (DUF697) J4N38_RS05960 PF00158 Sigma-54 interaction domain J4N38_RS05960 PF18024 Helix-turn-helix domain J4N38_RS05965 PF13302 Acetyltransferase (GNAT) domain J4N38_RS05985 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS05995 PF00925 GTP cyclohydrolase II J4N38_RS06020 PF01471 Putative peptidoglycan binding domain J4N38_RS06020 PF03734 L,D-transpeptidase catalytic domain J4N38_RS06025 PF05951 Bacterial protein of unknown function (DUF882) J4N38_RS06030 PF00753 Metallo-beta-lactamase superfamily J4N38_RS06045 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_RS06055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_RS06060 PF17200 Single Cache domain 2 J4N38_RS06060 PF07730 Histidine kinase J4N38_RS06065 PF00072 Response regulator receiver domain J4N38_RS06065 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS06075 PF00210 Ferritin-like domain J4N38_RS06085 PF13520 Amino acid permease J4N38_RS06090 PF00892 EamA-like transporter family J4N38_RS06115 PF04229 GrpB protein J4N38_RS06125 PF14552 Tautomerase enzyme J4N38_RS06220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_RS06395 PF01042 Endoribonuclease L-PSP J4N38_RS06505 PF09905 DNA-binding protein VF530 J4N38_RS06730 PF01609 Transposase DDE domain J4N38_RS06730 PF13006 Insertion element 4 transposase N-terminal J4N38_RS06870 PF04229 GrpB protein J4N38_RS06910 PF07007 Lysozyme inhibitor LprI J4N38_RS06940 PF02567 Phenazine biosynthesis-like protein J4N38_RS07055 PF04229 GrpB protein J4N38_RS07130 PF02567 Phenazine biosynthesis-like protein J4N38_RS07190 PF01609 Transposase DDE domain J4N38_RS07190 PF13006 Insertion element 4 transposase N-terminal J4N38_RS07215 PF01810 LysE type translocator J4N38_RS07220 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system J4N38_RS07225 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system J4N38_RS07240 PF02567 Phenazine biosynthesis-like protein J4N38_RS07320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_RS07325 PF04209 homogentisate 1,2-dioxygenase J4N38_RS07335 PF02798 Glutathione S-transferase, N-terminal domain J4N38_RS07335 PF14497 Glutathione S-transferase, C-terminal domain J4N38_RS07350 PF00691 OmpA family J4N38_RS07350 PF13488 Glycine zipper J4N38_RS07365 PF02913 FAD linked oxidases, C-terminal domain J4N38_RS07365 PF01565 FAD binding domain J4N38_RS07365 PF13183 4Fe-4S dicluster domain J4N38_RS07370 PF04191 Phospholipid methyltransferase J4N38_RS07380 PF00221 Aromatic amino acid lyase J4N38_RS07385 PF17392 Urocanase C-terminal domain J4N38_RS07385 PF17391 Urocanase N-terminal domain J4N38_RS07385 PF01175 Urocanase Rossmann-like domain J4N38_RS07390 PF00491 Arginase family J4N38_RS07395 PF01979 Amidohydrolase family J4N38_RS07400 PF07702 UTRA domain J4N38_RS07400 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS07405 PF07070 SpoOM protein J4N38_RS07425 PF05724 Thiopurine S-methyltransferase (TPMT) J4N38_RS07430 PF02222 ATP-grasp domain J4N38_RS07435 PF01966 HD domain J4N38_RS07435 PF11871 Domain of unknown function (DUF3391) J4N38_RS07440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N38_RS07440 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region J4N38_RS07445 PF04172 LrgB-like family J4N38_RS07450 PF03788 LrgA family J4N38_RS07455 PF08411 Exonuclease C-terminal J4N38_RS07455 PF00929 Exonuclease J4N38_RS07460 PF00375 Sodium:dicarboxylate symporter family J4N38_RS07465 PF13460 NAD(P)H-binding J4N38_RS07470 PF01613 Flavin reductase like domain J4N38_RS07475 PF02277 Phosphoribosyltransferase J4N38_RS07480 PF02654 Cobalamin-5-phosphate synthase J4N38_RS07495 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N38_RS07500 PF01032 FecCD transport family J4N38_RS07505 PF00005 ABC transporter J4N38_RS07515 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS07530 PF03466 LysR substrate binding domain J4N38_RS07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS07535 PF00005 ABC transporter J4N38_RS07545 PF09308 LuxQ, periplasmic J4N38_RS07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS07545 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS07545 PF00072 Response regulator receiver domain J4N38_RS07555 PF01863 Protein of unknown function DUF45 J4N38_RS07560 PF05971 RNA methyltransferase J4N38_RS07575 PF00561 alpha/beta hydrolase fold J4N38_RS07575 PF00364 Biotin-requiring enzyme J4N38_RS07580 PF04204 Homoserine O-succinyltransferase J4N38_RS07595 PF12792 CSS motif domain associated with EAL J4N38_RS07595 PF00563 EAL domain J4N38_RS07610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_RS07620 PF01970 Tripartite tricarboxylate transporter TctA family J4N38_RS07635 PF00069 Protein kinase domain J4N38_RS07650 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N38_RS07680 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS07680 PF07724 AAA domain (Cdc48 subfamily) J4N38_RS07680 PF17871 AAA lid domain J4N38_RS07680 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_RS07705 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N38_RS07735 PF06715 Gp5 C-terminal repeat (3 copies) J4N38_RS07735 PF04717 Type VI secretion system, phage-baseplate injector J4N38_RS07755 PF00285 Citrate synthase, C-terminal domain J4N38_RS07760 PF00330 Aconitase family (aconitate hydratase) J4N38_RS07760 PF00694 Aconitase C-terminal domain J4N38_RS07765 PF04303 PrpF protein J4N38_RS07770 PF00501 AMP-binding enzyme J4N38_RS07770 PF13193 AMP-binding enzyme C-terminal domain J4N38_RS07770 PF16177 Acetyl-coenzyme A synthetase N-terminus J4N38_RS07790 PF04055 Radical SAM superfamily J4N38_RS07795 PF06508 Queuosine biosynthesis protein QueC J4N38_RS07810 PF00691 OmpA family J4N38_RS07810 PF05736 OprF membrane domain J4N38_RS07825 PF10672 S-adenosylmethionine-dependent methyltransferase J4N38_RS07825 PF17785 PUA-like domain J4N38_RS07830 PF12729 Four helix bundle sensory module for signal transduction J4N38_RS07830 PF00672 HAMP domain J4N38_RS07830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS07835 PF00708 Acylphosphatase J4N38_RS07840 PF04358 DsrC like protein J4N38_RS07845 PF01027 Inhibitor of apoptosis-promoting Bax1 J4N38_RS07850 PF00005 ABC transporter J4N38_RS07855 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS07860 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS07865 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS07870 PF10414 Sirohaem synthase dimerisation region J4N38_RS07870 PF14824 Sirohaem biosynthesis protein central J4N38_RS07870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_RS07875 PF04461 Protein of unknown function (DUF520) J4N38_RS07880 PF00793 DAHP synthetase I family J4N38_RS07885 PF02896 PEP-utilising enzyme, TIM barrel domain J4N38_RS07885 PF05524 PEP-utilising enzyme, N-terminal J4N38_RS07885 PF00391 PEP-utilising enzyme, mobile domain J4N38_RS07905 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF J4N38_RS07905 PF01189 16S rRNA methyltransferase RsmB/F J4N38_RS07905 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF J4N38_RS07910 PF02470 MlaD protein J4N38_RS07915 PF04403 Paraquat-inducible protein A J4N38_RS07920 PF00664 ABC transporter transmembrane region J4N38_RS07920 PF00005 ABC transporter J4N38_RS07925 PF13185 GAF domain J4N38_RS07930 PF17516 ProQ C-terminal domain J4N38_RS07930 PF04352 ProQ/FINO family J4N38_RS07935 PF17804 Tail specific protease N-terminal domain J4N38_RS07935 PF00595 PDZ domain J4N38_RS07935 PF11818 C-terminal domain of tail specific protease (DUF3340) J4N38_RS07935 PF03572 Peptidase family S41 J4N38_RS07945 PF11940 Domain of unknown function (DUF3458) Ig-like fold J4N38_RS07945 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J4N38_RS07945 PF01433 Peptidase family M1 domain J4N38_RS07955 PF05088 Bacterial NAD-glutamate dehydrogenase J4N38_RS07960 PF01180 Dihydroorotate dehydrogenase J4N38_RS07965 PF07126 Cell-division protein ZapC J4N38_RS07970 PF01170 Putative RNA methylase family UPF0020 J4N38_RS07970 PF10672 S-adenosylmethionine-dependent methyltransferase J4N38_RS07970 PF02926 THUMP domain J4N38_RS07980 PF16326 ABC transporter C-terminal domain J4N38_RS07980 PF12848 ABC transporter J4N38_RS07980 PF00005 ABC transporter J4N38_RS07990 PF04957 Ribosome modulation factor J4N38_RS07995 PF07977 FabA-like domain J4N38_RS08000 PF13654 AAA domain J4N38_RS08000 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N38_RS08005 PF17414 MatP C-terminal ribbon-helix-helix domain J4N38_RS08005 PF06303 MatP N-terminal domain J4N38_RS08025 PF07968 Leukocidin/Hemolysin toxin family J4N38_RS08025 PF00652 Ricin-type beta-trefoil lectin domain J4N38_RS08040 PF04030 D-arabinono-1,4-lactone oxidase J4N38_RS08040 PF01565 FAD binding domain J4N38_RS08050 PF12729 Four helix bundle sensory module for signal transduction J4N38_RS08050 PF00672 HAMP domain J4N38_RS08050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS08055 PF00842 Alanine racemase, C-terminal domain J4N38_RS08055 PF01168 Alanine racemase, N-terminal domain J4N38_RS08195 PF00753 Metallo-beta-lactamase superfamily J4N38_RS08210 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N38_RS08225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N38_RS08225 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J4N38_RS08235 PF00403 Heavy-metal-associated domain J4N38_RS08250 PF00027 Cyclic nucleotide-binding domain J4N38_RS08250 PF13545 Crp-like helix-turn-helix domain J4N38_RS08255 PF00582 Universal stress protein family J4N38_RS08260 PF01171 PP-loop family J4N38_RS08280 PF00005 ABC transporter J4N38_RS08280 PF08402 TOBE domain J4N38_RS08285 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS08290 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS08295 PF13416 Bacterial extracellular solute-binding protein J4N38_RS08300 PF13416 Bacterial extracellular solute-binding protein J4N38_RS08305 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS08305 PF17155 Gammaproteobacterial periplasmic sensor domain J4N38_RS08310 PF02146 Sir2 family J4N38_RS08315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS08315 PF00672 HAMP domain J4N38_RS08315 PF02743 Cache domain J4N38_RS08320 PF01551 Peptidase family M23 J4N38_RS08325 PF03466 LysR substrate binding domain J4N38_RS08325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS08340 PF03591 AzlC protein J4N38_RS08375 PF00005 ABC transporter J4N38_RS08375 PF12848 ABC transporter J4N38_RS08385 PF04542 Sigma-70 region 2 J4N38_RS08385 PF08281 Sigma-70, region 4 J4N38_RS08395 PF12728 Helix-turn-helix domain J4N38_RS08395 PF12727 PBP superfamily domain J4N38_RS08400 PF12804 MobA-like NTP transferase domain J4N38_RS08405 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J4N38_RS08435 PF00480 ROK family J4N38_RS08440 PF03942 DTW domain J4N38_RS08450 PF00672 HAMP domain J4N38_RS08450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS08450 PF17202 Single cache domain 3 J4N38_RS08455 PF00877 NlpC/P60 family J4N38_RS08465 PF03881 Fructosamine kinase J4N38_RS08475 PF00677 Lumazine binding domain J4N38_RS08480 PF01554 MatE J4N38_RS08520 PF00672 HAMP domain J4N38_RS08520 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS08520 PF01627 Hpt domain J4N38_RS08520 PF17149 Periplasmic sensor domain found in signal transduction proteins J4N38_RS08520 PF00072 Response regulator receiver domain J4N38_RS08525 PF02954 Bacterial regulatory protein, Fis family J4N38_RS08525 PF00158 Sigma-54 interaction domain J4N38_RS08525 PF00072 Response regulator receiver domain J4N38_RS08535 PF00534 Glycosyl transferases group 1 J4N38_RS08535 PF13439 Glycosyltransferase Family 4 J4N38_RS08570 PF13439 Glycosyltransferase Family 4 J4N38_RS08570 PF00534 Glycosyl transferases group 1 J4N38_RS08580 PF02397 Bacterial sugar transferase J4N38_RS08605 PF01420 Type I restriction modification DNA specificity domain J4N38_RS08610 PF02384 N-6 DNA Methylase J4N38_RS08615 PF08463 EcoEI R protein C-terminal J4N38_RS08615 PF00271 Helicase conserved C-terminal domain J4N38_RS08615 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) J4N38_RS08615 PF04851 Type III restriction enzyme, res subunit J4N38_RS08660 PF13340 Putative transposase of IS4/5 family (DUF4096) J4N38_RS08680 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J4N38_RS08690 PF00593 TonB dependent receptor J4N38_RS08690 PF07715 TonB-dependent Receptor Plug Domain J4N38_RS08695 PF00668 Condensation domain J4N38_RS08695 PF00550 Phosphopantetheine attachment site J4N38_RS08695 PF00501 AMP-binding enzyme J4N38_RS08695 PF13193 AMP-binding enzyme C-terminal domain J4N38_RS08700 PF00501 AMP-binding enzyme J4N38_RS08700 PF13193 AMP-binding enzyme C-terminal domain J4N38_RS08700 PF00668 Condensation domain J4N38_RS08700 PF00550 Phosphopantetheine attachment site J4N38_RS08705 PF03621 MbtH-like protein J4N38_RS08710 PF00005 ABC transporter J4N38_RS08715 PF01032 FecCD transport family J4N38_RS08720 PF01497 Periplasmic binding protein J4N38_RS08725 PF00005 ABC transporter J4N38_RS08730 PF17837 4'-phosphopantetheinyl transferase N-terminal domain J4N38_RS08730 PF01648 4'-phosphopantetheinyl transferase superfamily J4N38_RS08735 PF02595 Glycerate kinase family J4N38_RS08740 PF05651 Putative sugar diacid recognition J4N38_RS08740 PF17853 GGDEF-like domain J4N38_RS08740 PF13556 PucR C-terminal helix-turn-helix domain J4N38_RS08745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS08745 PF03466 LysR substrate binding domain J4N38_RS08755 PF01609 Transposase DDE domain J4N38_RS08755 PF13006 Insertion element 4 transposase N-terminal J4N38_RS08760 PF06629 MltA-interacting protein MipA J4N38_RS08765 PF00672 HAMP domain J4N38_RS08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS08765 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS08770 PF00072 Response regulator receiver domain J4N38_RS08770 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS08785 PF10414 Sirohaem synthase dimerisation region J4N38_RS08785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_RS08785 PF14824 Sirohaem biosynthesis protein central J4N38_RS08790 PF01226 Formate/nitrite transporter J4N38_RS08795 PF13806 Rieske-like [2Fe-2S] domain J4N38_RS08800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N38_RS08800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N38_RS08800 PF04324 BFD-like [2Fe-2S] binding domain J4N38_RS08800 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS08800 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4N38_RS08805 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS08805 PF08448 PAS fold J4N38_RS08810 PF07687 Peptidase dimerisation domain J4N38_RS08810 PF01546 Peptidase family M20/M25/M40 J4N38_RS08835 PF13302 Acetyltransferase (GNAT) domain J4N38_RS08840 PF13673 Acetyltransferase (GNAT) domain J4N38_RS08885 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J4N38_RS08905 PF00072 Response regulator receiver domain J4N38_RS08905 PF12431 Transcriptional regulator J4N38_RS08910 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4N38_RS08910 PF17203 Single cache domain 3 J4N38_RS08910 PF00989 PAS fold J4N38_RS08910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS08925 PF03544 Gram-negative bacterial TonB protein C-terminal J4N38_RS08930 PF02472 Biopolymer transport protein ExbD/TolR J4N38_RS08935 PF01618 MotA/TolQ/ExbB proton channel family J4N38_RS08940 PF01618 MotA/TolQ/ExbB proton channel family J4N38_RS08965 PF01259 SAICAR synthetase J4N38_RS08975 PF04055 Radical SAM superfamily J4N38_RS08980 PF11230 Protein of unknown function (DUF3029) J4N38_RS08985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS08985 PF00672 HAMP domain J4N38_RS08990 PF00521 DNA gyrase/topoisomerase IV, subunit A J4N38_RS08990 PF03989 DNA gyrase C-terminal domain, beta-propeller J4N38_RS09000 PF03477 ATP cone domain J4N38_RS09000 PF02867 Ribonucleotide reductase, barrel domain J4N38_RS09000 PF00317 Ribonucleotide reductase, all-alpha domain J4N38_RS09005 PF00268 Ribonucleotide reductase, small chain J4N38_RS09010 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS09020 PF00994 Probable molybdopterin binding domain J4N38_RS09035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N38_RS09040 PF03435 Saccharopine dehydrogenase NADP binding domain J4N38_RS09040 PF16653 Saccharopine dehydrogenase C-terminal domain J4N38_RS09045 PF00202 Aminotransferase class-III J4N38_RS09055 PF03422 Carbohydrate binding module (family 6) J4N38_RS09055 PF02412 Thrombospondin type 3 repeat J4N38_RS09060 PF06965 Na+/H+ antiporter 1 J4N38_RS09070 PF02687 FtsX-like permease family J4N38_RS09070 PF12704 MacB-like periplasmic core domain J4N38_RS09075 PF00005 ABC transporter J4N38_RS09080 PF01554 MatE J4N38_RS09085 PF11066 Protein of unknown function (DUF2867) J4N38_RS09085 PF13460 NAD(P)H-binding J4N38_RS09095 PF07690 Major Facilitator Superfamily J4N38_RS09100 PF00849 RNA pseudouridylate synthase J4N38_RS09100 PF01479 S4 domain J4N38_RS09105 PF00271 Helicase conserved C-terminal domain J4N38_RS09105 PF04851 Type III restriction enzyme, res subunit J4N38_RS09115 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS09115 PF00072 Response regulator receiver domain J4N38_RS09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS09145 PF00873 AcrB/AcrD/AcrF family J4N38_RS09150 PF13533 Biotin-lipoyl like J4N38_RS09165 PF00535 Glycosyl transferase family 2 J4N38_RS09170 PF01386 Ribosomal L25p family J4N38_RS09175 PF00717 Peptidase S24-like J4N38_RS09180 PF13438 Domain of unknown function (DUF4113) J4N38_RS09180 PF00817 impB/mucB/samB family J4N38_RS09180 PF11799 impB/mucB/samB family C-terminal domain J4N38_RS09185 PF00579 tRNA synthetases class I (W and Y) J4N38_RS09220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4N38_RS09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS09240 PF03466 LysR substrate binding domain J4N38_RS09245 PF13533 Biotin-lipoyl like J4N38_RS09250 PF07690 Major Facilitator Superfamily J4N38_RS09270 PF01327 Polypeptide deformylase J4N38_RS09275 PF03352 Methyladenine glycosylase J4N38_RS09275 PF00117 Glutamine amidotransferase class-I J4N38_RS09275 PF00958 GMP synthase C terminal domain J4N38_RS09275 PF13673 Acetyltransferase (GNAT) domain J4N38_RS09275 PF13302 Acetyltransferase (GNAT) domain J4N38_RS09285 PF02264 LamB porin J4N38_RS09290 PF08212 Lipocalin-like domain J4N38_RS09300 PF03831 PhnA domain J4N38_RS09300 PF08274 PhnA Zinc-Ribbon J4N38_RS09315 PF13495 Phage integrase, N-terminal SAM-like domain J4N38_RS09315 PF00589 Phage integrase family J4N38_RS09325 PF00563 EAL domain J4N38_RS09325 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS09325 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS09350 PF01235 Sodium:alanine symporter family J4N38_RS09355 PF01810 LysE type translocator J4N38_RS09360 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J4N38_RS09365 PF02581 Thiamine monophosphate synthase J4N38_RS09380 PF02028 BCCT, betaine/carnitine/choline family transporter J4N38_RS09390 PF00171 Aldehyde dehydrogenase family J4N38_RS09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS09400 PF03466 LysR substrate binding domain J4N38_RS09405 PF00561 alpha/beta hydrolase fold J4N38_RS09420 PF00815 Histidinol dehydrogenase J4N38_RS09425 PF03328 HpcH/HpaI aldolase/citrate lyase family J4N38_RS09430 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS09435 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_RS09445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_RS09445 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N38_RS09460 PF00474 Sodium:solute symporter family J4N38_RS09465 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS09480 PF00313 'Cold-shock' DNA-binding domain J4N38_RS09505 PF02321 Outer membrane efflux protein J4N38_RS09510 PF03150 Di-haem cytochrome c peroxidase J4N38_RS09510 PF00034 Cytochrome c J4N38_RS09510 PF14376 Haem-binding domain J4N38_RS09515 PF09308 LuxQ, periplasmic J4N38_RS09515 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS09515 PF00072 Response regulator receiver domain J4N38_RS09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS09525 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS09535 PF01565 FAD binding domain J4N38_RS09535 PF09330 D-lactate dehydrogenase, membrane binding J4N38_RS09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS09540 PF03466 LysR substrate binding domain J4N38_RS09545 PF01554 MatE J4N38_RS09555 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS09555 PF13407 Periplasmic binding protein domain J4N38_RS09560 PF00294 pfkB family carbohydrate kinase J4N38_RS09600 PF03483 B3/4 domain J4N38_RS09600 PF03484 tRNA synthetase B5 domain J4N38_RS09600 PF03147 Ferredoxin-fold anticodon binding domain J4N38_RS09600 PF01588 Putative tRNA binding domain J4N38_RS09600 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4N38_RS09605 PF01409 tRNA synthetases class II core domain (F) J4N38_RS09605 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4N38_RS09630 PF07995 Glucose / Sorbosone dehydrogenase J4N38_RS09640 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS09655 PF04994 TfoX C-terminal domain J4N38_RS09655 PF04993 TfoX N-terminal domain J4N38_RS09665 PF03956 Lysine exporter LysO J4N38_RS09675 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4N38_RS09680 PF01418 Helix-turn-helix domain, rpiR family J4N38_RS09680 PF01380 SIS domain J4N38_RS09685 PF00465 Iron-containing alcohol dehydrogenase J4N38_RS09685 PF00171 Aldehyde dehydrogenase family J4N38_RS09690 PF00462 Glutaredoxin J4N38_RS09695 PF02080 TrkA-C domain J4N38_RS09695 PF06826 Predicted Permease Membrane Region J4N38_RS09700 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS09710 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS09715 PF00005 ABC transporter J4N38_RS09725 PF01228 Glycine radical J4N38_RS09725 PF02901 Pyruvate formate lyase-like J4N38_RS09735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS09735 PF00672 HAMP domain J4N38_RS09740 PF04055 Radical SAM superfamily J4N38_RS09750 PF03887 YfbU domain J4N38_RS09755 PF06798 PrkA serine protein kinase C-terminal domain J4N38_RS09755 PF08298 PrkA AAA domain J4N38_RS09760 PF04285 Protein of unknown function (DUF444) J4N38_RS09765 PF04293 SpoVR like protein J4N38_RS09770 PF02348 Cytidylyltransferase J4N38_RS09775 PF03966 Trm112p-like protein J4N38_RS09780 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4N38_RS09785 PF00664 ABC transporter transmembrane region J4N38_RS09785 PF00005 ABC transporter J4N38_RS09790 PF03772 Competence protein J4N38_RS09790 PF00753 Metallo-beta-lactamase superfamily J4N38_RS09800 PF12704 MacB-like periplasmic core domain J4N38_RS09800 PF02687 FtsX-like permease family J4N38_RS09805 PF00005 ABC transporter J4N38_RS09810 PF02687 FtsX-like permease family J4N38_RS09810 PF12704 MacB-like periplasmic core domain J4N38_RS09820 PF03461 TRCF domain J4N38_RS09820 PF00271 Helicase conserved C-terminal domain J4N38_RS09820 PF02559 CarD-like/TRCF domain J4N38_RS09820 PF00270 DEAD/DEAH box helicase J4N38_RS09820 PF17757 UvrB interaction domain J4N38_RS09835 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS09840 PF05728 Uncharacterised protein family (UPF0227) J4N38_RS09850 PF13036 Peptidoglycan-synthase activator LpoB J4N38_RS09850 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J4N38_RS09865 PF01230 HIT domain J4N38_RS09870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS09870 PF00672 HAMP domain J4N38_RS09880 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS09880 PF07840 FadR C-terminal domain J4N38_RS09885 PF06450 Bacterial Na+/H+ antiporter B (NhaB) J4N38_RS09890 PF02600 Disulfide bond formation protein DsbB J4N38_RS09895 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4N38_RS09895 PF01580 FtsK/SpoIIIE family J4N38_RS09895 PF17854 FtsK alpha domain J4N38_RS09895 PF09397 Ftsk gamma domain J4N38_RS09900 PF01037 Lrp/AsnC ligand binding domain J4N38_RS09905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4N38_RS09905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4N38_RS09910 PF04217 Protein of unknown function, DUF412 J4N38_RS09915 PF00871 Acetokinase family J4N38_RS09920 PF07085 DRTGG domain J4N38_RS09920 PF01515 Phosphate acetyl/butaryl transferase J4N38_RS09925 PF13409 Glutathione S-transferase, N-terminal domain J4N38_RS09930 PF00005 ABC transporter J4N38_RS09930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS09935 PF00005 ABC transporter J4N38_RS09935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS09940 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS09940 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_RS09945 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS09950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS09960 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N38_RS09970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS09970 PF00672 HAMP domain J4N38_RS09970 PF02743 Cache domain J4N38_RS09975 PF04389 Peptidase family M28 J4N38_RS09975 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_RS09980 PF00082 Subtilase family J4N38_RS09980 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_RS09980 PF05922 Peptidase inhibitor I9 J4N38_RS09985 PF02743 Cache domain J4N38_RS09985 PF00672 HAMP domain J4N38_RS09985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS10010 PF02687 FtsX-like permease family J4N38_RS10010 PF12704 MacB-like periplasmic core domain J4N38_RS10010 PF00005 ABC transporter J4N38_RS10015 PF00005 ABC transporter J4N38_RS10015 PF12704 MacB-like periplasmic core domain J4N38_RS10015 PF02687 FtsX-like permease family J4N38_RS10020 PF02687 FtsX-like permease family J4N38_RS10020 PF12704 MacB-like periplasmic core domain J4N38_RS10030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_RS10035 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4N38_RS10035 PF07504 Fungalysin/Thermolysin Propeptide Motif J4N38_RS10035 PF03413 Peptidase propeptide and YPEB domain J4N38_RS10035 PF01447 Thermolysin metallopeptidase, catalytic domain J4N38_RS10035 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_RS10045 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N38_RS10045 PF00326 Prolyl oligopeptidase family J4N38_RS10060 PF00535 Glycosyl transferase family 2 J4N38_RS10110 PF01544 CorA-like Mg2+ transporter protein J4N38_RS10135 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS10145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4N38_RS10150 PF09619 Type III secretion system lipoprotein chaperone (YscW) J4N38_RS10160 PF01037 Lrp/AsnC ligand binding domain J4N38_RS10160 PF13404 AsnC-type helix-turn-helix domain J4N38_RS10165 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_RS10185 PF07690 Major Facilitator Superfamily J4N38_RS10190 PF03601 Conserved hypothetical protein 698 J4N38_RS10200 PF00501 AMP-binding enzyme J4N38_RS10200 PF13193 AMP-binding enzyme C-terminal domain J4N38_RS10205 PF13378 Enolase C-terminal domain-like J4N38_RS10210 PF00378 Enoyl-CoA hydratase/isomerase J4N38_RS10215 PF12697 Alpha/beta hydrolase family J4N38_RS10220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_RS10220 PF16582 Middle domain of thiamine pyrophosphate J4N38_RS10220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_RS10225 PF00425 chorismate binding enzyme J4N38_RS10230 PF00155 Aminotransferase class I and II J4N38_RS10240 PF01966 HD domain J4N38_RS10240 PF13286 Phosphohydrolase-associated domain J4N38_RS10245 PF00962 Adenosine/AMP deaminase J4N38_RS10260 PF00271 Helicase conserved C-terminal domain J4N38_RS10260 PF00270 DEAD/DEAH box helicase J4N38_RS10270 PF08496 Peptidase family S49 N-terminal J4N38_RS10270 PF01343 Peptidase family S49 J4N38_RS10275 PF00106 short chain dehydrogenase J4N38_RS10280 PF00224 Pyruvate kinase, barrel domain J4N38_RS10280 PF02887 Pyruvate kinase, alpha/beta domain J4N38_RS10285 PF00480 ROK family J4N38_RS10290 PF01584 CheW-like domain J4N38_RS10290 PF00072 Response regulator receiver domain J4N38_RS10295 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4N38_RS10305 PF00384 Molybdopterin oxidoreductase J4N38_RS10305 PF18364 Molybdopterin oxidoreductase N-terminal domain J4N38_RS10305 PF01568 Molydopterin dinucleotide binding domain J4N38_RS10310 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N38_RS10315 PF06796 Periplasmic nitrate reductase protein NapE J4N38_RS10320 PF03649 Uncharacterised protein family (UPF0014) J4N38_RS10330 PF01226 Formate/nitrite transporter J4N38_RS10355 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS10355 PF07724 AAA domain (Cdc48 subfamily) J4N38_RS10355 PF02861 Clp amino terminal domain, pathogenicity island component J4N38_RS10355 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_RS10355 PF17871 AAA lid domain J4N38_RS10360 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4N38_RS10365 PF00313 'Cold-shock' DNA-binding domain J4N38_RS10370 PF03971 Monomeric isocitrate dehydrogenase J4N38_RS10375 PF00849 RNA pseudouridylate synthase J4N38_RS10380 PF02938 GAD domain J4N38_RS10380 PF00152 tRNA synthetases class II (D, K and N) J4N38_RS10380 PF01336 OB-fold nucleic acid binding domain J4N38_RS10385 PF01904 Protein of unknown function DUF72 J4N38_RS10390 PF13649 Methyltransferase domain J4N38_RS10395 PF08003 Protein of unknown function (DUF1698) J4N38_RS10400 PF08443 RimK-like ATP-grasp domain J4N38_RS10400 PF18030 RimK PreATP-grasp domain J4N38_RS10415 PF04310 MukB N-terminal J4N38_RS10415 PF16330 MukB hinge domain J4N38_RS10420 PF04288 MukE-like family J4N38_RS10425 PF17192 MukF middle domain J4N38_RS10425 PF03882 MukF winged-helix domain J4N38_RS10425 PF17193 MukF C-terminal domain J4N38_RS10430 PF13847 Methyltransferase domain J4N38_RS10435 PF02698 DUF218 domain J4N38_RS10440 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS10440 PF00072 Response regulator receiver domain J4N38_RS10445 PF02613 Nitrate reductase delta subunit J4N38_RS10450 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS10455 PF04994 TfoX C-terminal domain J4N38_RS10455 PF04993 TfoX N-terminal domain J4N38_RS10460 PF01609 Transposase DDE domain J4N38_RS10460 PF13006 Insertion element 4 transposase N-terminal J4N38_RS10480 PF00534 Glycosyl transferases group 1 J4N38_RS10480 PF08323 Starch synthase catalytic domain J4N38_RS10485 PF00483 Nucleotidyl transferase J4N38_RS10490 PF01131 DNA topoisomerase J4N38_RS10490 PF08272 Topoisomerase I zinc-ribbon-like J4N38_RS10490 PF01396 Topoisomerase DNA binding C4 zinc finger J4N38_RS10490 PF01751 Toprim domain J4N38_RS10495 PF10692 Protein of unknown function (DUF2498) J4N38_RS10500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4N38_RS10510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4N38_RS10515 PF04376 Arginine-tRNA-protein transferase, N terminus J4N38_RS10515 PF04377 Arginine-tRNA-protein transferase, C terminus J4N38_RS10520 PF01176 Translation initiation factor 1A / IF-1 J4N38_RS10525 PF00265 Thymidine kinase J4N38_RS10530 PF09190 DALR domain J4N38_RS10530 PF01406 tRNA synthetases class I (C) catalytic domain J4N38_RS10535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N38_RS10540 PF00149 Calcineurin-like phosphoesterase J4N38_RS10545 PF00563 EAL domain J4N38_RS10545 PF08668 HDOD domain J4N38_RS10550 PF02810 SEC-C motif J4N38_RS10555 PF07023 Protein of unknown function (DUF1315) J4N38_RS10565 PF01641 SelR domain J4N38_RS10570 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N38_RS10570 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N38_RS10575 PF01263 Aldose 1-epimerase J4N38_RS10580 PF13847 Methyltransferase domain J4N38_RS10595 PF00245 Alkaline phosphatase J4N38_RS10600 PF03472 Autoinducer binding domain J4N38_RS10600 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS10610 PF07690 Major Facilitator Superfamily J4N38_RS10620 PF00970 Oxidoreductase FAD-binding domain J4N38_RS10620 PF00175 Oxidoreductase NAD-binding domain J4N38_RS10625 PF03692 Putative zinc- or iron-chelating domain J4N38_RS10635 PF03692 Putative zinc- or iron-chelating domain J4N38_RS10640 PF13406 Transglycosylase SLT domain J4N38_RS10645 PF05166 YcgL domain J4N38_RS10650 PF03775 Septum formation inhibitor MinC, C-terminal domain J4N38_RS10650 PF05209 Septum formation inhibitor MinC, N-terminal domain J4N38_RS10655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N38_RS10660 PF03776 Septum formation topological specificity factor MinE J4N38_RS10665 PF00171 Aldehyde dehydrogenase family J4N38_RS10665 PF00465 Iron-containing alcohol dehydrogenase J4N38_RS10670 PF01914 MarC family integral membrane protein J4N38_RS10675 PF00520 Ion transport protein J4N38_RS10675 PF00027 Cyclic nucleotide-binding domain J4N38_RS10680 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N38_RS10680 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N38_RS10685 PF03553 Na+/H+ antiporter family J4N38_RS10690 PF07702 UTRA domain J4N38_RS10690 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS10695 PF00367 phosphotransferase system, EIIB J4N38_RS10695 PF02378 Phosphotransferase system, EIIC J4N38_RS10700 PF08244 Glycosyl hydrolases family 32 C terminal J4N38_RS10700 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4N38_RS10710 PF04245 37-kD nucleoid-associated bacterial protein J4N38_RS10715 PF07208 Protein of unknown function (DUF1414) J4N38_RS10720 PF11893 Domain of unknown function (DUF3413) J4N38_RS10720 PF00884 Sulfatase J4N38_RS10740 PF13344 Haloacid dehalogenase-like hydrolase J4N38_RS10740 PF00293 NUDIX domain J4N38_RS10745 PF00850 Histone deacetylase domain J4N38_RS10750 PF00106 short chain dehydrogenase J4N38_RS10755 PF01161 Phosphatidylethanolamine-binding protein J4N38_RS10765 PF01131 DNA topoisomerase J4N38_RS10765 PF01751 Toprim domain J4N38_RS10770 PF00462 Glutaredoxin J4N38_RS10775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4N38_RS10775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4N38_RS10790 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4N38_RS10795 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J4N38_RS10795 PF12557 Cob(I)alamin adenosyltransferase N terminal J4N38_RS10815 PF01266 FAD dependent oxidoreductase J4N38_RS10815 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4N38_RS10825 PF05378 Hydantoinase/oxoprolinase N-terminal region J4N38_RS10825 PF01968 Hydantoinase/oxoprolinase J4N38_RS10835 PF01074 Glycosyl hydrolases family 38 N-terminal domain J4N38_RS10835 PF07748 Glycosyl hydrolases family 38 C-terminal domain J4N38_RS10835 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 J4N38_RS10835 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain J4N38_RS10835 PF09261 Alpha mannosidase middle domain J4N38_RS10840 PF00480 ROK family J4N38_RS10845 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase J4N38_RS10855 PF00480 ROK family J4N38_RS10860 PF05170 AsmA family J4N38_RS10865 PF00485 Phosphoribulokinase / Uridine kinase family J4N38_RS10870 PF10609 NUBPL iron-transfer P-loop NTPase J4N38_RS10875 PF01588 Putative tRNA binding domain J4N38_RS10875 PF09334 tRNA synthetases class I (M) J4N38_RS10885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N38_RS10885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N38_RS10890 PF01048 Phosphorylase superfamily J4N38_RS10895 PF00403 Heavy-metal-associated domain J4N38_RS10900 PF01554 MatE J4N38_RS10905 PF01743 Poly A polymerase head domain J4N38_RS10905 PF00571 CBS domain J4N38_RS10905 PF01368 DHH family J4N38_RS10905 PF02272 DHHA1 domain J4N38_RS10915 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS10920 PF02391 MoaE protein J4N38_RS10925 PF02597 ThiS family J4N38_RS10930 PF01967 MoaC family J4N38_RS10935 PF00994 Probable molybdopterin binding domain J4N38_RS10940 PF06463 Molybdenum Cofactor Synthesis C J4N38_RS10940 PF04055 Radical SAM superfamily J4N38_RS10945 PF01933 Uncharacterised protein family UPF0052 J4N38_RS10950 PF01627 Hpt domain J4N38_RS10955 PF00158 Sigma-54 interaction domain J4N38_RS10955 PF00072 Response regulator receiver domain J4N38_RS10955 PF02954 Bacterial regulatory protein, Fis family J4N38_RS10960 PF02151 UvrB/uvrC motif J4N38_RS10960 PF12344 Ultra-violet resistance protein B J4N38_RS10960 PF00271 Helicase conserved C-terminal domain J4N38_RS10960 PF04851 Type III restriction enzyme, res subunit J4N38_RS10960 PF17757 UvrB interaction domain J4N38_RS10990 PF04225 Opacity-associated protein A LysM-like domain J4N38_RS10990 PF01551 Peptidase family M23 J4N38_RS11005 PF18269 T3SS EscN ATPase C-terminal domain J4N38_RS11005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_RS11015 PF01706 FliG C-terminal domain J4N38_RS11015 PF14841 FliG middle domain J4N38_RS11015 PF14842 FliG N-terminal domain J4N38_RS11020 PF01514 Secretory protein of YscJ/FliF family J4N38_RS11020 PF08345 Flagellar M-ring protein C-terminal J4N38_RS11025 PF02049 Flagellar hook-basal body complex protein FliE J4N38_RS11030 PF02954 Bacterial regulatory protein, Fis family J4N38_RS11030 PF00072 Response regulator receiver domain J4N38_RS11030 PF00158 Sigma-54 interaction domain J4N38_RS11035 PF00691 OmpA family J4N38_RS11035 PF04972 BON domain J4N38_RS11045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N38_RS11050 PF00813 FliP family J4N38_RS11055 PF01313 Bacterial export proteins, family 3 J4N38_RS11060 PF01311 Bacterial export proteins, family 1 J4N38_RS11065 PF01312 FlhB HrpN YscU SpaS Family J4N38_RS11070 PF00771 FHIPEP family J4N38_RS11080 PF00669 Bacterial flagellin N-terminal helical region J4N38_RS11080 PF00700 Bacterial flagellin C-terminal helical region J4N38_RS11085 PF07195 Flagellar hook-associated protein 2 C-terminus J4N38_RS11085 PF02465 Flagellar hook-associated protein 2 N-terminus J4N38_RS11085 PF07196 Flagellin hook IN motif J4N38_RS11090 PF02561 Flagellar protein FliS J4N38_RS11105 PF03748 Flagellar basal body-associated protein FliL J4N38_RS11110 PF04542 Sigma-70 region 2 J4N38_RS11110 PF04545 Sigma-70, region 4 J4N38_RS11115 PF01618 MotA/TolQ/ExbB proton channel family J4N38_RS11120 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N38_RS11120 PF00691 OmpA family J4N38_RS11145 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N38_RS11145 PF10135 Rod binding protein J4N38_RS11150 PF02119 Flagellar P-ring protein J4N38_RS11155 PF02107 Flagellar L-ring protein J4N38_RS11160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11160 PF00460 Flagella basal body rod protein J4N38_RS11165 PF00460 Flagella basal body rod protein J4N38_RS11165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11170 PF07559 Flagellar basal body protein FlaE J4N38_RS11170 PF00460 Flagella basal body rod protein J4N38_RS11170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11175 PF03963 Flagellar hook capping protein - N-terminal region J4N38_RS11175 PF13860 FlgD Ig-like domain J4N38_RS11175 PF13861 FlgD Tudor-like domain J4N38_RS11180 PF00460 Flagella basal body rod protein J4N38_RS11180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11185 PF00460 Flagella basal body rod protein J4N38_RS11205 PF01476 LysM domain J4N38_RS11205 PF01464 Transglycosylase SLT domain J4N38_RS11210 PF02508 Rnf-Nqr subunit, membrane protein J4N38_RS11215 PF04060 Putative Fe-S cluster J4N38_RS11220 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4N38_RS11220 PF12838 4Fe-4S dicluster domain J4N38_RS11220 PF13375 RnfC Barrel sandwich hybrid domain J4N38_RS11220 PF10531 SLBB domain J4N38_RS11225 PF03116 NQR2, RnfD, RnfE family J4N38_RS11230 PF04205 FMN-binding domain J4N38_RS11235 PF02508 Rnf-Nqr subunit, membrane protein J4N38_RS11240 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N38_RS11240 PF00633 Helix-hairpin-helix motif J4N38_RS11240 PF10576 Iron-sulfur binding domain of endonuclease III J4N38_RS11245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_RS11250 PF10952 Protein of unknown function (DUF2753) J4N38_RS11255 PF18393 MotY N-terminal domain J4N38_RS11255 PF00691 OmpA family J4N38_RS11260 PF00929 Exonuclease J4N38_RS11265 PF13726 Na+-H+ antiporter family J4N38_RS11265 PF03553 Na+/H+ antiporter family J4N38_RS11270 PF06804 NlpB/DapX lipoprotein J4N38_RS11275 PF00701 Dihydrodipicolinate synthetase family J4N38_RS11280 PF01842 ACT domain J4N38_RS11285 PF00578 AhpC/TSA family J4N38_RS11290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS11290 PF02743 Cache domain J4N38_RS11290 PF00672 HAMP domain J4N38_RS11295 PF01594 AI-2E family transporter J4N38_RS11305 PF01435 Peptidase family M48 J4N38_RS11305 PF13181 Tetratricopeptide repeat J4N38_RS11310 PF03960 ArsC family J4N38_RS11315 PF03358 NADPH-dependent FMN reductase J4N38_RS11330 PF00860 Permease family J4N38_RS11335 PF04073 Aminoacyl-tRNA editing domain J4N38_RS11340 PF02872 5'-nucleotidase, C-terminal domain J4N38_RS11340 PF00149 Calcineurin-like phosphoesterase J4N38_RS11345 PF00793 DAHP synthetase I family J4N38_RS11350 PF13369 Transglutaminase-like superfamily J4N38_RS11360 PF17827 PrmC N-terminal domain J4N38_RS11360 PF13847 Methyltransferase domain J4N38_RS11365 PF03462 PCRF domain J4N38_RS11365 PF00472 RF-1 domain J4N38_RS11370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4N38_RS11370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4N38_RS11370 PF01488 Shikimate / quinate 5-dehydrogenase J4N38_RS11375 PF03550 Outer membrane lipoprotein LolB J4N38_RS11380 PF08544 GHMP kinases C terminal J4N38_RS11380 PF00288 GHMP kinases N terminal domain J4N38_RS11385 PF14572 Phosphoribosyl synthetase-associated domain J4N38_RS11385 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4N38_RS11390 PF01195 Peptidyl-tRNA hydrolase J4N38_RS11395 PF06071 Protein of unknown function (DUF933) J4N38_RS11395 PF01926 50S ribosome-binding GTPase J4N38_RS11500 PF07196 Flagellin hook IN motif J4N38_RS11500 PF00700 Bacterial flagellin C-terminal helical region J4N38_RS11500 PF00669 Bacterial flagellin N-terminal helical region J4N38_RS11505 PF00700 Bacterial flagellin C-terminal helical region J4N38_RS11505 PF07196 Flagellin hook IN motif J4N38_RS11505 PF00669 Bacterial flagellin N-terminal helical region J4N38_RS11510 PF00700 Bacterial flagellin C-terminal helical region J4N38_RS11510 PF00669 Bacterial flagellin N-terminal helical region J4N38_RS11515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11515 PF07196 Flagellin hook IN motif J4N38_RS11520 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N38_RS11520 PF10135 Rod binding protein J4N38_RS11525 PF02119 Flagellar P-ring protein J4N38_RS11530 PF02107 Flagellar L-ring protein J4N38_RS11535 PF00460 Flagella basal body rod protein J4N38_RS11535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11540 PF00460 Flagella basal body rod protein J4N38_RS11540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11545 PF07559 Flagellar basal body protein FlaE J4N38_RS11545 PF00460 Flagella basal body rod protein J4N38_RS11545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11550 PF13861 FlgD Tudor-like domain J4N38_RS11550 PF03963 Flagellar hook capping protein - N-terminal region J4N38_RS11550 PF13860 FlgD Ig-like domain J4N38_RS11555 PF00460 Flagella basal body rod protein J4N38_RS11555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N38_RS11560 PF00460 Flagella basal body rod protein J4N38_RS11565 PF01739 CheR methyltransferase, SAM binding domain J4N38_RS11565 PF03705 CheR methyltransferase, all-alpha domain J4N38_RS11570 PF01584 CheW-like domain J4N38_RS11570 PF00072 Response regulator receiver domain J4N38_RS11580 PF04316 Anti-sigma-28 factor, FlgM J4N38_RS11610 PF08241 Methyltransferase domain J4N38_RS11620 PF00691 OmpA family J4N38_RS11620 PF01389 OmpA-like transmembrane domain J4N38_RS11625 PF00691 OmpA family J4N38_RS11625 PF01389 OmpA-like transmembrane domain J4N38_RS11630 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N38_RS11635 PF00403 Heavy-metal-associated domain J4N38_RS11645 PF18125 RlmM ferredoxin-like domain J4N38_RS11645 PF01728 FtsJ-like methyltransferase J4N38_RS11660 PF03466 LysR substrate binding domain J4N38_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS11665 PF02926 THUMP domain J4N38_RS11665 PF02568 Thiamine biosynthesis protein (ThiI) J4N38_RS11670 PF00691 OmpA family J4N38_RS11670 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N38_RS11675 PF01618 MotA/TolQ/ExbB proton channel family J4N38_RS11680 PF02609 Exonuclease VII small subunit J4N38_RS11685 PF00348 Polyprenyl synthetase J4N38_RS11690 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4N38_RS11690 PF02780 Transketolase, C-terminal domain J4N38_RS11690 PF02779 Transketolase, pyrimidine binding domain J4N38_RS11695 PF00849 RNA pseudouridylate synthase J4N38_RS11700 PF04287 tRNA pseudouridine synthase C J4N38_RS11715 PF13302 Acetyltransferase (GNAT) domain J4N38_RS11725 PF02629 CoA binding domain J4N38_RS11725 PF00549 CoA-ligase J4N38_RS11730 PF08442 ATP-grasp domain J4N38_RS11730 PF00549 CoA-ligase J4N38_RS11735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N38_RS11735 PF00364 Biotin-requiring enzyme J4N38_RS11735 PF02817 e3 binding domain J4N38_RS11740 PF02779 Transketolase, pyrimidine binding domain J4N38_RS11740 PF00676 Dehydrogenase E1 component J4N38_RS11740 PF16870 2-oxoglutarate dehydrogenase C-terminal J4N38_RS11740 PF16078 2-oxoglutarate dehydrogenase N-terminus J4N38_RS11745 PF13085 2Fe-2S iron-sulfur cluster binding domain J4N38_RS11750 PF00890 FAD binding domain J4N38_RS11750 PF02910 Fumarate reductase flavoprotein C-term J4N38_RS11755 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4N38_RS11760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4N38_RS11765 PF00285 Citrate synthase, C-terminal domain J4N38_RS11770 PF01784 NIF3 (NGG1p interacting factor 3) J4N38_RS11780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N38_RS11780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N38_RS11780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N38_RS11780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N38_RS11785 PF03925 SeqA protein C-terminal domain J4N38_RS11785 PF17206 SeqA protein N-terminal domain J4N38_RS11790 PF12697 Alpha/beta hydrolase family J4N38_RS11800 PF00258 Flavodoxin J4N38_RS11805 PF12826 Helix-hairpin-helix motif J4N38_RS11805 PF00533 BRCA1 C Terminus (BRCT) domain J4N38_RS11805 PF01653 NAD-dependent DNA ligase adenylation domain J4N38_RS11805 PF03120 NAD-dependent DNA ligase OB-fold domain J4N38_RS11805 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4N38_RS11810 PF04354 ZipA, C-terminal FtsZ-binding domain J4N38_RS11820 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_RS11825 PF00381 PTS HPr component phosphorylation site J4N38_RS11830 PF05524 PEP-utilising enzyme, N-terminal J4N38_RS11830 PF00391 PEP-utilising enzyme, mobile domain J4N38_RS11830 PF02896 PEP-utilising enzyme, TIM barrel domain J4N38_RS11835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N38_RS11840 PF01494 FAD binding domain J4N38_RS11845 PF00919 Uncharacterized protein family UPF0004 J4N38_RS11845 PF01938 TRAM domain J4N38_RS11845 PF04055 Radical SAM superfamily J4N38_RS11850 PF02562 PhoH-like protein J4N38_RS11855 PF02130 Uncharacterized protein family UPF0054 J4N38_RS11860 PF03471 Transporter associated domain J4N38_RS11860 PF00571 CBS domain J4N38_RS11865 PF00795 Carbon-nitrogen hydrolase J4N38_RS11870 PF07295 Zinc-ribbon containing domain J4N38_RS11875 PF08264 Anticodon-binding domain of tRNA J4N38_RS11875 PF13603 Leucyl-tRNA synthetase, Domain 2 J4N38_RS11875 PF00133 tRNA synthetases class I (I, L, M and V) J4N38_RS11880 PF04390 Lipopolysaccharide-assembly J4N38_RS11885 PF14840 Processivity clamp loader gamma complex DNA pol III C-term J4N38_RS11885 PF06144 DNA polymerase III, delta subunit J4N38_RS11895 PF02590 Predicted SPOUT methyltransferase J4N38_RS11900 PF03717 Penicillin-binding Protein dimerisation domain J4N38_RS11900 PF00905 Penicillin binding protein transpeptidase domain J4N38_RS11905 PF01098 Cell cycle protein J4N38_RS11910 PF05036 Sporulation related domain J4N38_RS11910 PF03330 Lytic transglycolase J4N38_RS11915 PF00768 D-alanyl-D-alanine carboxypeptidase J4N38_RS11915 PF07943 Penicillin-binding protein 5, C-terminal domain J4N38_RS11920 PF04359 Protein of unknown function (DUF493) J4N38_RS11925 PF03099 Biotin/lipoate A/B protein ligase family J4N38_RS11930 PF04055 Radical SAM superfamily J4N38_RS11930 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4N38_RS11945 PF00464 Serine hydroxymethyltransferase J4N38_RS11955 PF00873 AcrB/AcrD/AcrF family J4N38_RS11960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_RS11985 PF16657 Maltogenic Amylase, C-terminal domain J4N38_RS11985 PF00128 Alpha amylase, catalytic domain J4N38_RS11990 PF02378 Phosphotransferase system, EIIC J4N38_RS11990 PF00367 phosphotransferase system, EIIB J4N38_RS11995 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS12010 PF00005 ABC transporter J4N38_RS12010 PF09383 NIL domain J4N38_RS12015 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS12020 PF03180 NLPA lipoprotein J4N38_RS12025 PF03806 AbgT putative transporter family J4N38_RS12030 PF00444 Ribosomal protein L36 J4N38_RS12035 PF01197 Ribosomal protein L31 J4N38_RS12040 PF18389 TrmO C-terminal domain J4N38_RS12040 PF01980 tRNA-methyltransferase O J4N38_RS12045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N38_RS12045 PF04073 Aminoacyl-tRNA editing domain J4N38_RS12045 PF03129 Anticodon binding domain J4N38_RS12050 PF13230 Glutamine amidotransferases class-II J4N38_RS12055 PF13580 SIS domain J4N38_RS12060 PF09317 Domain of unknown function (DUF1974) J4N38_RS12060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N38_RS12060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N38_RS12060 PF02770 Acyl-CoA dehydrogenase, middle domain J4N38_RS12070 PF00929 Exonuclease J4N38_RS12075 PF00075 RNase H J4N38_RS12080 PF08241 Methyltransferase domain J4N38_RS12085 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4N38_RS12085 PF00753 Metallo-beta-lactamase superfamily J4N38_RS12090 PF01464 Transglycosylase SLT domain J4N38_RS12090 PF01476 LysM domain J4N38_RS12100 PF03372 Endonuclease/Exonuclease/phosphatase family J4N38_RS12105 PF00543 Nitrogen regulatory protein P-II J4N38_RS12110 PF00034 Cytochrome c J4N38_RS12115 PF01171 PP-loop family J4N38_RS12115 PF09179 TilS substrate binding domain J4N38_RS12115 PF11734 TilS substrate C-terminal domain J4N38_RS12120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4N38_RS12125 PF02811 PHP domain J4N38_RS12125 PF14579 Helix-hairpin-helix motif J4N38_RS12125 PF01336 OB-fold nucleic acid binding domain J4N38_RS12125 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N38_RS12125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N38_RS12130 PF01351 Ribonuclease HII J4N38_RS12135 PF02684 Lipid-A-disaccharide synthetase J4N38_RS12140 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4N38_RS12140 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS12145 PF07977 FabA-like domain J4N38_RS12150 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS12150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4N38_RS12155 PF03938 Outer membrane protein (OmpH-like) J4N38_RS12160 PF01103 Surface antigen J4N38_RS12160 PF07244 Surface antigen variable number repeat J4N38_RS12165 PF17820 PDZ domain J4N38_RS12165 PF02163 Peptidase family M50 J4N38_RS12170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4N38_RS12170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4N38_RS12170 PF13288 DXP reductoisomerase C-terminal domain J4N38_RS12180 PF01255 Putative undecaprenyl diphosphate synthase J4N38_RS12185 PF01765 Ribosome recycling factor J4N38_RS12190 PF00696 Amino acid kinase family J4N38_RS12195 PF00889 Elongation factor TS J4N38_RS12200 PF00318 Ribosomal protein S2 J4N38_RS12205 PF00557 Metallopeptidase family M24 J4N38_RS12210 PF01966 HD domain J4N38_RS12210 PF08335 GlnD PII-uridylyltransferase J4N38_RS12210 PF01909 Nucleotidyltransferase domain J4N38_RS12215 PF11944 Protein of unknown function (DUF3461) J4N38_RS12220 PF04608 Phosphatidylglycerophosphatase A J4N38_RS12225 PF02769 AIR synthase related protein, C-terminal domain J4N38_RS12225 PF00586 AIR synthase related protein, N-terminal domain J4N38_RS12230 PF01029 NusB family J4N38_RS12235 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4N38_RS12240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4N38_RS12240 PF00925 GTP cyclohydrolase II J4N38_RS12245 PF00677 Lumazine binding domain J4N38_RS12250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N38_RS12250 PF01872 RibD C-terminal domain J4N38_RS12255 PF03477 ATP cone domain J4N38_RS12260 PF00171 Aldehyde dehydrogenase family J4N38_RS12265 PF01472 PUA domain J4N38_RS12265 PF00696 Amino acid kinase family J4N38_RS12270 PF07417 Sigma factor-binding transcriptional regulator Crl J4N38_RS12275 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) J4N38_RS12280 PF00156 Phosphoribosyl transferase domain J4N38_RS12285 PF00860 Permease family J4N38_RS12290 PF01546 Peptidase family M20/M25/M40 J4N38_RS12290 PF07687 Peptidase dimerisation domain J4N38_RS12295 PF08443 RimK-like ATP-grasp domain J4N38_RS12295 PF18030 RimK PreATP-grasp domain J4N38_RS12300 PF08443 RimK-like ATP-grasp domain J4N38_RS12300 PF18030 RimK PreATP-grasp domain J4N38_RS12310 PF00209 Sodium:neurotransmitter symporter family J4N38_RS12315 PF06483 Chitinase C J4N38_RS12315 PF00704 Glycosyl hydrolases family 18 J4N38_RS12325 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N38_RS12325 PF03449 Transcription elongation factor, N-terminal J4N38_RS12330 PF00270 DEAD/DEAH box helicase J4N38_RS12330 PF00271 Helicase conserved C-terminal domain J4N38_RS12330 PF00570 HRDC domain J4N38_RS12330 PF16124 RecQ zinc-binding J4N38_RS12330 PF09382 RQC domain J4N38_RS12335 PF00817 impB/mucB/samB family J4N38_RS12335 PF11799 impB/mucB/samB family C-terminal domain J4N38_RS12340 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS12340 PF00072 Response regulator receiver domain J4N38_RS12350 PF02424 ApbE family J4N38_RS12355 PF00970 Oxidoreductase FAD-binding domain J4N38_RS12355 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS12355 PF00175 Oxidoreductase NAD-binding domain J4N38_RS12360 PF02508 Rnf-Nqr subunit, membrane protein J4N38_RS12365 PF02508 Rnf-Nqr subunit, membrane protein J4N38_RS12370 PF04205 FMN-binding domain J4N38_RS12375 PF03116 NQR2, RnfD, RnfE family J4N38_RS12380 PF11973 NQRA C-terminal domain J4N38_RS12380 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) J4N38_RS12385 PF01722 BolA-like protein J4N38_RS12390 PF05175 Methyltransferase small domain J4N38_RS12400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N38_RS12420 PF04542 Sigma-70 region 2 J4N38_RS12420 PF04545 Sigma-70, region 4 J4N38_RS12430 PF03502 Nucleoside-specific channel-forming protein, Tsx J4N38_RS12435 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4N38_RS12435 PF02558 Ketopantoate reductase PanE/ApbA J4N38_RS12440 PF01965 DJ-1/PfpI family J4N38_RS12445 PF00266 Aminotransferase class-V J4N38_RS12450 PF18073 Rubredoxin metal binding domain J4N38_RS12460 PF18429 Domain of unknown function (DUF5609) J4N38_RS12470 PF01048 Phosphorylase superfamily J4N38_RS12475 PF01676 Metalloenzyme superfamily J4N38_RS12480 PF02885 Glycosyl transferase family, helical bundle domain J4N38_RS12480 PF00591 Glycosyl transferase family, a/b domain J4N38_RS12480 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J4N38_RS12485 PF01791 DeoC/LacD family aldolase J4N38_RS12495 PF07670 Nucleoside recognition J4N38_RS12495 PF07662 Na+ dependent nucleoside transporter C-terminus J4N38_RS12495 PF01773 Na+ dependent nucleoside transporter N-terminus J4N38_RS12500 PF01026 TatD related DNase J4N38_RS12510 PF03883 Peroxide stress protein YaaA J4N38_RS12515 PF01235 Sodium:alanine symporter family J4N38_RS12530 PF03167 Uracil DNA glycosylase superfamily J4N38_RS12535 PF01261 Xylose isomerase-like TIM barrel J4N38_RS12540 PF01228 Glycine radical J4N38_RS12545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS12545 PF03466 LysR substrate binding domain J4N38_RS12550 PF01925 Sulfite exporter TauE/SafE J4N38_RS12555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4N38_RS12555 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4N38_RS12555 PF02142 MGS-like domain J4N38_RS12560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4N38_RS12560 PF00117 Glutamine amidotransferase class-I J4N38_RS12565 PF05173 Dihydrodipicolinate reductase, C-terminus J4N38_RS12565 PF01113 Dihydrodipicolinate reductase, N-terminus J4N38_RS12570 PF00293 NUDIX domain J4N38_RS12575 PF07516 SecA Wing and Scaffold domain J4N38_RS12575 PF01043 SecA preprotein cross-linking domain J4N38_RS12575 PF07517 SecA DEAD-like domain J4N38_RS12575 PF02810 SEC-C motif J4N38_RS12580 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4N38_RS12585 PF12327 FtsZ family, C-terminal domain J4N38_RS12585 PF00091 Tubulin/FtsZ family, GTPase domain J4N38_RS12590 PF02491 SHS2 domain inserted in FTSA J4N38_RS12595 PF03799 Cell division protein FtsQ J4N38_RS12595 PF08478 POTRA domain, FtsQ-type J4N38_RS12600 PF01225 Mur ligase family, catalytic domain J4N38_RS12600 PF02875 Mur ligase family, glutamate ligase domain J4N38_RS12600 PF08245 Mur ligase middle domain J4N38_RS12605 PF04101 Glycosyltransferase family 28 C-terminal domain J4N38_RS12605 PF03033 Glycosyltransferase family 28 N-terminal domain J4N38_RS12610 PF01098 Cell cycle protein J4N38_RS12615 PF02875 Mur ligase family, glutamate ligase domain J4N38_RS12615 PF08245 Mur ligase middle domain J4N38_RS12620 PF00953 Glycosyl transferase family 4 J4N38_RS12620 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J4N38_RS12625 PF01225 Mur ligase family, catalytic domain J4N38_RS12625 PF02875 Mur ligase family, glutamate ligase domain J4N38_RS12625 PF08245 Mur ligase middle domain J4N38_RS12630 PF01225 Mur ligase family, catalytic domain J4N38_RS12630 PF02875 Mur ligase family, glutamate ligase domain J4N38_RS12630 PF08245 Mur ligase middle domain J4N38_RS12635 PF03717 Penicillin-binding Protein dimerisation domain J4N38_RS12635 PF00905 Penicillin binding protein transpeptidase domain J4N38_RS12640 PF04999 Cell division protein FtsL J4N38_RS12645 PF01795 MraW methylase family J4N38_RS12655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_RS12660 PF04348 LppC putative lipoprotein J4N38_RS12665 PF02021 Uncharacterised protein family UPF0102 J4N38_RS12670 PF13580 SIS domain J4N38_RS12675 PF04972 BON domain J4N38_RS12680 PF04386 Stringent starvation protein B J4N38_RS12685 PF00043 Glutathione S-transferase, C-terminal domain J4N38_RS12685 PF02798 Glutathione S-transferase, N-terminal domain J4N38_RS12690 PF02167 Cytochrome C1 family J4N38_RS12695 PF00032 Cytochrome b(C-terminal)/b6/petD J4N38_RS12695 PF00033 Cytochrome b/b6/petB J4N38_RS12700 PF00355 Rieske [2Fe-2S] domain J4N38_RS12700 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J4N38_RS12705 PF00380 Ribosomal protein S9/S16 J4N38_RS12710 PF00572 Ribosomal protein L13 J4N38_RS12715 PF03969 AFG1-like ATPase J4N38_RS12720 PF06295 Protein of unknown function (DUF1043) J4N38_RS12725 PF00595 PDZ domain J4N38_RS12730 PF13180 PDZ domain J4N38_RS12735 PF03989 DNA gyrase C-terminal domain, beta-propeller J4N38_RS12735 PF00521 DNA gyrase/topoisomerase IV, subunit A J4N38_RS12740 PF01751 Toprim domain J4N38_RS12740 PF00986 DNA gyrase B subunit, carboxyl terminus J4N38_RS12740 PF00204 DNA gyrase B J4N38_RS12740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS12745 PF05728 Uncharacterised protein family (UPF0227) J4N38_RS12750 PF00149 Calcineurin-like phosphoesterase J4N38_RS12755 PF06853 Protein of unknown function (DUF1249) J4N38_RS12760 PF00293 NUDIX domain J4N38_RS12765 PF02321 Outer membrane efflux protein J4N38_RS12775 PF00072 Response regulator receiver domain J4N38_RS12775 PF00989 PAS fold J4N38_RS12775 PF01627 Hpt domain J4N38_RS12775 PF18415 Histidine kinase receptor ArcB trans-membrane domain J4N38_RS12775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS12775 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS12780 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS12780 PF00563 EAL domain J4N38_RS12780 PF01590 GAF domain J4N38_RS12780 PF00360 Phytochrome region J4N38_RS12785 PF04055 Radical SAM superfamily J4N38_RS12785 PF16199 Radical_SAM C-terminal domain J4N38_RS12790 PF01493 GXGXG motif J4N38_RS12790 PF01645 Conserved region in glutamate synthase J4N38_RS12790 PF00310 Glutamine amidotransferases class-II J4N38_RS12790 PF04898 Glutamate synthase central domain J4N38_RS12795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N38_RS12795 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS12800 PF00310 Glutamine amidotransferases class-II J4N38_RS12800 PF04898 Glutamate synthase central domain J4N38_RS12800 PF01645 Conserved region in glutamate synthase J4N38_RS12800 PF01493 GXGXG motif J4N38_RS12805 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS12805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N38_RS12815 PF09157 Pseudouridine synthase II TruB, C-terminal J4N38_RS12815 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4N38_RS12815 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4N38_RS12820 PF02033 Ribosome-binding factor A J4N38_RS12825 PF00009 Elongation factor Tu GTP binding domain J4N38_RS12825 PF11987 Translation-initiation factor 2 J4N38_RS12825 PF08364 Bacterial translation initiation factor IF-2 associated region J4N38_RS12825 PF04760 Translation initiation factor IF-2, N-terminal region J4N38_RS12830 PF00575 S1 RNA binding domain J4N38_RS12830 PF13184 NusA-like KH domain J4N38_RS12830 PF08529 NusA N-terminal domain J4N38_RS12835 PF17384 RimP C-terminal SH3 domain J4N38_RS12835 PF02576 RimP N-terminal domain J4N38_RS12910 PF03840 Preprotein translocase SecG subunit J4N38_RS12915 PF13508 Acetyltransferase (GNAT) domain J4N38_RS12920 PF02036 SCP-2 sterol transfer family J4N38_RS12925 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS12925 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS12925 PF00563 EAL domain J4N38_RS12930 PF01136 Peptidase family U32 J4N38_RS12935 PF01136 Peptidase family U32 J4N38_RS12940 PF00152 tRNA synthetases class II (D, K and N) J4N38_RS12940 PF01336 OB-fold nucleic acid binding domain J4N38_RS12950 PF05525 Branched-chain amino acid transport protein J4N38_RS12955 PF05175 Methyltransferase small domain J4N38_RS12960 PF00271 Helicase conserved C-terminal domain J4N38_RS12960 PF00270 DEAD/DEAH box helicase J4N38_RS12965 PF00009 Elongation factor Tu GTP binding domain J4N38_RS12965 PF03144 Elongation factor Tu domain 2 J4N38_RS12965 PF16658 Class II release factor RF3, C-terminal domain J4N38_RS12970 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS12970 PF00563 EAL domain J4N38_RS12970 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS12975 PF00583 Acetyltransferase (GNAT) family J4N38_RS12985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N38_RS12985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N38_RS12985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N38_RS12985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N38_RS12990 PF00809 Pterin binding enzyme J4N38_RS12995 PF01434 Peptidase family M41 J4N38_RS12995 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS12995 PF06480 FtsH Extracellular J4N38_RS12995 PF17862 AAA+ lid domain J4N38_RS13000 PF01728 FtsJ-like methyltransferase J4N38_RS13005 PF01985 CRS1 / YhbY (CRM) domain J4N38_RS13010 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N38_RS13010 PF03449 Transcription elongation factor, N-terminal J4N38_RS13015 PF13609 Gram-negative porin J4N38_RS13020 PF00873 AcrB/AcrD/AcrF family J4N38_RS13030 PF01521 Iron-sulphur cluster biosynthesis J4N38_RS13035 PF00202 Aminotransferase class-III J4N38_RS13040 PF01594 AI-2E family transporter J4N38_RS13045 PF05175 Methyltransferase small domain J4N38_RS13045 PF08468 Methyltransferase small domain N-terminal J4N38_RS13050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS13050 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS13050 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS13050 PF00072 Response regulator receiver domain J4N38_RS13055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS13060 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS13065 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS13065 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_RS13070 PF00005 ABC transporter J4N38_RS13070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS13075 PF00005 ABC transporter J4N38_RS13075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS13085 PF01869 BadF/BadG/BcrA/BcrD ATPase family J4N38_RS13090 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N38_RS13090 PF02838 Glycosyl hydrolase family 20, domain 2 J4N38_RS13095 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J4N38_RS13095 PF06165 Glycosyltransferase family 36 J4N38_RS13100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N38_RS13100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N38_RS13100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N38_RS13100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N38_RS13105 PF00005 ABC transporter J4N38_RS13105 PF08402 TOBE domain J4N38_RS13115 PF13416 Bacterial extracellular solute-binding protein J4N38_RS13120 PF00909 Ammonium Transporter Family J4N38_RS13125 PF00543 Nitrogen regulatory protein P-II J4N38_RS13130 PF06062 Uncharacterised protein family (UPF0231) J4N38_RS13135 PF06434 Aconitate hydratase 2 N-terminus J4N38_RS13135 PF00330 Aconitase family (aconitate hydratase) J4N38_RS13135 PF11791 Aconitate B N-terminal domain J4N38_RS13140 PF01734 Patatin-like phospholipase J4N38_RS13145 PF14814 Bifunctional transglycosylase second domain J4N38_RS13145 PF00912 Transglycosylase J4N38_RS13145 PF00905 Penicillin binding protein transpeptidase domain J4N38_RS13155 PF13737 Transposase DDE domain J4N38_RS13170 PF00171 Aldehyde dehydrogenase family J4N38_RS13180 PF01797 Transposase IS200 like J4N38_RS13205 PF13737 Transposase DDE domain J4N38_RS13215 PF13737 Transposase DDE domain J4N38_RS13225 PF13737 Transposase DDE domain J4N38_RS13230 PF00884 Sulfatase J4N38_RS13235 PF16925 Tetracyclin repressor-like, C-terminal domain J4N38_RS13235 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS13265 PF00270 DEAD/DEAH box helicase J4N38_RS13265 PF04408 Helicase associated domain (HA2) J4N38_RS13265 PF00271 Helicase conserved C-terminal domain J4N38_RS13265 PF08482 ATP-dependent helicase C-terminal J4N38_RS13270 PF17746 SfsA N-terminal OB domain J4N38_RS13270 PF03749 Sugar fermentation stimulation protein RE domain J4N38_RS13275 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4N38_RS13280 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N38_RS13285 PF12627 Probable RNA and SrmB- binding site of polymerase A J4N38_RS13285 PF12626 Polymerase A arginine-rich C-terminus J4N38_RS13285 PF01743 Poly A polymerase head domain J4N38_RS13290 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4N38_RS13295 PF02548 Ketopantoate hydroxymethyltransferase J4N38_RS13300 PF02569 Pantoate-beta-alanine ligase J4N38_RS13305 PF01061 ABC-2 type transporter J4N38_RS13310 PF00005 ABC transporter J4N38_RS13315 PF01740 STAS domain J4N38_RS13315 PF00916 Sulfate permease family J4N38_RS13320 PF00484 Carbonic anhydrase J4N38_RS13325 PF00156 Phosphoribosyl transferase domain J4N38_RS13330 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS13335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N38_RS13335 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS13340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N38_RS13340 PF00364 Biotin-requiring enzyme J4N38_RS13340 PF02817 e3 binding domain J4N38_RS13345 PF17831 Pyruvate dehydrogenase E1 component middle domain J4N38_RS13345 PF00456 Transketolase, thiamine diphosphate binding domain J4N38_RS13350 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS13350 PF07729 FCD domain J4N38_RS13355 PF02272 DHHA1 domain J4N38_RS13355 PF17768 RecJ OB domain J4N38_RS13355 PF01368 DHH family J4N38_RS13360 PF10411 Disulfide bond isomerase protein N-terminus J4N38_RS13360 PF13098 Thioredoxin-like domain J4N38_RS13365 PF00589 Phage integrase family J4N38_RS13365 PF02899 Phage integrase, N-terminal SAM-like domain J4N38_RS13370 PF00258 Flavodoxin J4N38_RS13375 PF01510 N-acetylmuramoyl-L-alanine amidase J4N38_RS13380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4N38_RS13380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4N38_RS13385 PF07963 Prokaryotic N-terminal methylation motif J4N38_RS13385 PF00114 Pilin (bacterial filament) J4N38_RS13390 PF00437 Type II/IV secretion system protein J4N38_RS13390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N38_RS13395 PF00482 Type II secretion system (T2SS), protein F J4N38_RS13400 PF06750 Bacterial Peptidase A24 N-terminal domain J4N38_RS13400 PF01478 Type IV leader peptidase family J4N38_RS13405 PF01121 Dephospho-CoA kinase J4N38_RS13410 PF07072 Cell division protein J4N38_RS13415 PF03884 DNA gyrase inhibitor YacG J4N38_RS13420 PF01245 Ribosomal protein L19 J4N38_RS13425 PF01746 tRNA (Guanine-1)-methyltransferase J4N38_RS13430 PF05239 PRC-barrel domain J4N38_RS13430 PF01782 RimM N-terminal domain J4N38_RS13435 PF00886 Ribosomal protein S16 J4N38_RS13440 PF00448 SRP54-type protein, GTPase domain J4N38_RS13440 PF02881 SRP54-type protein, helical bundle domain J4N38_RS13440 PF02978 Signal peptide binding domain J4N38_RS13445 PF01578 Cytochrome C assembly protein J4N38_RS13450 PF03471 Transporter associated domain J4N38_RS13450 PF00571 CBS domain J4N38_RS13450 PF01595 Cyclin M transmembrane N-terminal domain J4N38_RS13455 PF00140 Sigma-70 factor, region 1.2 J4N38_RS13455 PF04542 Sigma-70 region 2 J4N38_RS13455 PF04545 Sigma-70, region 4 J4N38_RS13455 PF04539 Sigma-70 region 3 J4N38_RS13460 PF01476 LysM domain J4N38_RS13460 PF01551 Peptidase family M23 J4N38_RS13470 PF01975 Survival protein SurE J4N38_RS13475 PF01142 tRNA pseudouridine synthase D (TruD) J4N38_RS13480 PF02542 YgbB family J4N38_RS13485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4N38_RS13490 PF04977 Septum formation initiator J4N38_RS13495 PF02673 Bacitracin resistance protein BacA J4N38_RS13500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4N38_RS13505 PF02152 Dihydroneopterin aldolase J4N38_RS13510 PF02660 Glycerol-3-phosphate acyltransferase J4N38_RS13515 PF00561 alpha/beta hydrolase fold J4N38_RS13520 PF13006 Insertion element 4 transposase N-terminal J4N38_RS13520 PF01609 Transposase DDE domain J4N38_RS13525 PF00814 Glycoprotease family J4N38_RS13530 PF01165 Ribosomal protein S21 J4N38_RS13535 PF09424 Yqey-like protein J4N38_RS13540 PF08278 DNA primase DnaG DnaB-binding J4N38_RS13540 PF10410 DnaB-helicase binding domain of primase J4N38_RS13540 PF01807 CHC2 zinc finger J4N38_RS13540 PF08275 DNA primase catalytic core, N-terminal domain J4N38_RS13545 PF04545 Sigma-70, region 4 J4N38_RS13545 PF04539 Sigma-70 region 3 J4N38_RS13545 PF04546 Sigma-70, non-essential region J4N38_RS13545 PF00140 Sigma-70 factor, region 1.2 J4N38_RS13545 PF03979 Sigma-70 factor, region 1.1 J4N38_RS13545 PF04542 Sigma-70 region 2 J4N38_RS13555 PF00226 DnaJ domain J4N38_RS13555 PF05099 Tellurite resistance protein TerB J4N38_RS13560 PF04453 LPS transport system D J4N38_RS13560 PF03968 OstA-like protein J4N38_RS13565 PF09312 SurA N-terminal domain J4N38_RS13570 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4N38_RS13575 PF00398 Ribosomal RNA adenine dimethylase J4N38_RS13580 PF04379 ApaG domain J4N38_RS13585 PF00149 Calcineurin-like phosphoesterase J4N38_RS13590 PF00186 Dihydrofolate reductase J4N38_RS13595 PF12821 Threonine/Serine exporter, ThrE J4N38_RS13600 PF06738 Putative threonine/serine exporter J4N38_RS13605 PF01018 GTP1/OBG J4N38_RS13605 PF01926 50S ribosome-binding GTPase J4N38_RS13610 PF01016 Ribosomal L27 protein J4N38_RS13615 PF00829 Ribosomal prokaryotic L21 protein J4N38_RS13620 PF00348 Polyprenyl synthetase J4N38_RS13670 PF00072 Response regulator receiver domain J4N38_RS13685 PF00145 C-5 cytosine-specific DNA methylase J4N38_RS13715 PF00589 Phage integrase family J4N38_RS13715 PF02899 Phage integrase, N-terminal SAM-like domain J4N38_RS13780 PF02664 S-Ribosylhomocysteinase (LuxS) J4N38_RS13790 PF04262 Glutamate-cysteine ligase J4N38_RS13795 PF00675 Insulinase (Peptidase family M16) J4N38_RS13795 PF05193 Peptidase M16 inactive domain J4N38_RS13800 PF09335 SNARE associated Golgi protein J4N38_RS13805 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_RS13805 PF00107 Zinc-binding dehydrogenase J4N38_RS13810 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit J4N38_RS13815 PF02436 Conserved carboxylase domain J4N38_RS13815 PF00682 HMGL-like J4N38_RS13815 PF00364 Biotin-requiring enzyme J4N38_RS13820 PF04277 Oxaloacetate decarboxylase, gamma chain J4N38_RS13865 PF02599 Global regulator protein family J4N38_RS13870 PF00696 Amino acid kinase family J4N38_RS13870 PF01842 ACT domain J4N38_RS13870 PF13840 ACT domain J4N38_RS13875 PF02272 DHHA1 domain J4N38_RS13875 PF01411 tRNA synthetases class II (A) J4N38_RS13875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N38_RS13880 PF02631 RecX family J4N38_RS13885 PF00154 recA bacterial DNA recombination protein J4N38_RS13890 PF02464 Competence-damaged protein J4N38_RS13895 PF00488 MutS domain V J4N38_RS13895 PF01624 MutS domain I J4N38_RS13895 PF05190 MutS family domain IV J4N38_RS13895 PF05192 MutS domain III J4N38_RS13895 PF05188 MutS domain II J4N38_RS13900 PF03739 Lipopolysaccharide export system permease LptF/LptG J4N38_RS13905 PF03739 Lipopolysaccharide export system permease LptF/LptG J4N38_RS13910 PF02789 Cytosol aminopeptidase family, N-terminal domain J4N38_RS13910 PF00883 Cytosol aminopeptidase family, catalytic domain J4N38_RS13915 PF04364 DNA polymerase III chi subunit, HolC J4N38_RS13920 PF10458 Valyl tRNA synthetase tRNA binding arm J4N38_RS13920 PF00133 tRNA synthetases class I (I, L, M and V) J4N38_RS13920 PF08264 Anticodon-binding domain of tRNA J4N38_RS13930 PF05987 Bacterial protein of unknown function (DUF898) J4N38_RS13940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N38_RS13940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_RS13945 PF00849 RNA pseudouridylate synthase J4N38_RS13955 PF12137 RNA polymerase recycling family C-terminal J4N38_RS13955 PF18337 RapA N-terminal Tudor like domain J4N38_RS13955 PF18339 RapA N-terminal Tudor like domain 1 J4N38_RS13955 PF00176 SNF2 family N-terminal domain J4N38_RS13955 PF00271 Helicase conserved C-terminal domain J4N38_RS13960 PF02562 PhoH-like protein J4N38_RS13960 PF13638 PIN domain J4N38_RS13965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N38_RS13965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N38_RS13970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N38_RS13970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N38_RS13975 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain J4N38_RS13975 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain J4N38_RS13980 PF01042 Endoribonuclease L-PSP J4N38_RS13990 PF00056 lactate/malate dehydrogenase, NAD binding domain J4N38_RS13990 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4N38_RS13995 PF01316 Arginine repressor, DNA binding domain J4N38_RS13995 PF02863 Arginine repressor, C-terminal domain J4N38_RS14000 PF16868 NMT1-like family J4N38_RS14010 PF00582 Universal stress protein family J4N38_RS14025 PF06877 Regulator of ribonuclease activity B J4N38_RS14035 PF00266 Aminotransferase class-V J4N38_RS14040 PF00696 Amino acid kinase family J4N38_RS14040 PF01842 ACT domain J4N38_RS14045 PF01523 Putative modulator of DNA gyrase J4N38_RS14050 PF04751 Protein of unknown function (DUF615) J4N38_RS14055 PF01553 Acyltransferase J4N38_RS14060 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4N38_RS14065 PF01722 BolA-like protein J4N38_RS14075 PF05494 MlaC protein J4N38_RS14080 PF02470 MlaD protein J4N38_RS14085 PF02405 Permease MlaE J4N38_RS14090 PF00005 ABC transporter J4N38_RS14095 PF01699 Sodium/calcium exchanger protein J4N38_RS14100 PF00571 CBS domain J4N38_RS14100 PF01380 SIS domain J4N38_RS14115 PF03968 OstA-like protein J4N38_RS14120 PF00005 ABC transporter J4N38_RS14120 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4N38_RS14125 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4N38_RS14125 PF04963 Sigma-54 factor, core binding domain J4N38_RS14125 PF04552 Sigma-54, DNA binding domain J4N38_RS14130 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4N38_RS14135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_RS14140 PF03668 P-loop ATPase protein family J4N38_RS14145 PF00381 PTS HPr component phosphorylation site J4N38_RS14150 PF01769 Divalent cation transporter J4N38_RS14150 PF03448 MgtE intracellular N domain J4N38_RS14150 PF00571 CBS domain J4N38_RS14155 PF02310 B12 binding domain J4N38_RS14155 PF02607 B12 binding domain J4N38_RS14155 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4N38_RS14155 PF00809 Pterin binding enzyme J4N38_RS14155 PF02574 Homocysteine S-methyltransferase J4N38_RS14160 PF00999 Sodium/hydrogen exchanger family J4N38_RS14225 PF01507 Phosphoadenosine phosphosulfate reductase family J4N38_RS14230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N38_RS14230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N38_RS14235 PF00258 Flavodoxin J4N38_RS14235 PF00175 Oxidoreductase NAD-binding domain J4N38_RS14235 PF00667 FAD binding domain J4N38_RS14255 PF01207 Dihydrouridine synthase (Dus) J4N38_RS14260 PF00072 Response regulator receiver domain J4N38_RS14265 PF01627 Hpt domain J4N38_RS14265 PF00072 Response regulator receiver domain J4N38_RS14265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_RS14265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS14265 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS14265 PF00672 HAMP domain J4N38_RS14270 PF01475 Ferric uptake regulator family J4N38_RS14285 PF03600 Citrate transporter J4N38_RS14285 PF02080 TrkA-C domain J4N38_RS14290 PF00009 Elongation factor Tu GTP binding domain J4N38_RS14295 PF01507 Phosphoadenosine phosphosulfate reductase family J4N38_RS14300 PF10414 Sirohaem synthase dimerisation region J4N38_RS14300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_RS14300 PF14824 Sirohaem biosynthesis protein central J4N38_RS14305 PF00149 Calcineurin-like phosphoesterase J4N38_RS14305 PF02872 5'-nucleotidase, C-terminal domain J4N38_RS14315 PF13673 Acetyltransferase (GNAT) domain J4N38_RS14330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_RS14330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N38_RS14340 PF01196 Ribosomal protein L17 J4N38_RS14345 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4N38_RS14345 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4N38_RS14345 PF01000 RNA polymerase Rpb3/RpoA insert domain J4N38_RS14350 PF00163 Ribosomal protein S4/S9 N-terminal domain J4N38_RS14350 PF01479 S4 domain J4N38_RS14355 PF00411 Ribosomal protein S11 J4N38_RS14360 PF00416 Ribosomal protein S13/S18 J4N38_RS14365 PF00444 Ribosomal protein L36 J4N38_RS14370 PF00344 SecY translocase J4N38_RS14375 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4N38_RS14380 PF00327 Ribosomal protein L30p/L7e J4N38_RS14385 PF00333 Ribosomal protein S5, N-terminal domain J4N38_RS14385 PF03719 Ribosomal protein S5, C-terminal domain J4N38_RS14390 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4N38_RS14395 PF00347 Ribosomal protein L6 J4N38_RS14400 PF00410 Ribosomal protein S8 J4N38_RS14405 PF00253 Ribosomal protein S14p/S29e J4N38_RS14410 PF00281 Ribosomal protein L5 J4N38_RS14410 PF00673 ribosomal L5P family C-terminus J4N38_RS14415 PF00467 KOW motif J4N38_RS14415 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4N38_RS14420 PF00238 Ribosomal protein L14p/L23e J4N38_RS14425 PF00366 Ribosomal protein S17 J4N38_RS14430 PF00831 Ribosomal L29 protein J4N38_RS14435 PF00252 Ribosomal protein L16p/L10e J4N38_RS14440 PF00189 Ribosomal protein S3, C-terminal domain J4N38_RS14440 PF07650 KH domain J4N38_RS14445 PF00237 Ribosomal protein L22p/L17e J4N38_RS14450 PF00203 Ribosomal protein S19 J4N38_RS14455 PF03947 Ribosomal Proteins L2, C-terminal domain J4N38_RS14455 PF00181 Ribosomal Proteins L2, RNA binding domain J4N38_RS14460 PF00276 Ribosomal protein L23 J4N38_RS14465 PF00573 Ribosomal protein L4/L1 family J4N38_RS14470 PF00297 Ribosomal protein L3 J4N38_RS14475 PF00338 Ribosomal protein S10p/S20e J4N38_RS14480 PF00588 SpoU rRNA Methylase family J4N38_RS14480 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4N38_RS14485 PF08461 Ribonuclease R winged-helix domain J4N38_RS14485 PF17876 Cold shock domain J4N38_RS14485 PF08206 Ribonuclease B OB domain J4N38_RS14485 PF00773 RNB domain J4N38_RS14485 PF00575 S1 RNA binding domain J4N38_RS14490 PF01979 Amidohydrolase family J4N38_RS14495 PF08238 Sel1 repeat J4N38_RS14500 PF00709 Adenylosuccinate synthetase J4N38_RS14505 PF01112 Asparaginase J4N38_RS14510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_RS14520 PF02254 TrkA-N domain J4N38_RS14520 PF00999 Sodium/hydrogen exchanger family J4N38_RS14525 PF02525 Flavodoxin-like fold J4N38_RS14530 PF12848 ABC transporter J4N38_RS14530 PF00005 ABC transporter J4N38_RS14540 PF00561 alpha/beta hydrolase fold J4N38_RS14545 PF06794 Uncharacterised protein family (UPF0270) J4N38_RS14550 PF00485 Phosphoribulokinase / Uridine kinase family J4N38_RS14555 PF00027 Cyclic nucleotide-binding domain J4N38_RS14555 PF13545 Crp-like helix-turn-helix domain J4N38_RS14560 PF03600 Citrate transporter J4N38_RS14560 PF02080 TrkA-C domain J4N38_RS14565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS14565 PF00672 HAMP domain J4N38_RS14575 PF01676 Metalloenzyme superfamily J4N38_RS14575 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4N38_RS14580 PF01551 Peptidase family M23 J4N38_RS14590 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS14590 PF08360 QacR-like protein, C-terminal region J4N38_RS14595 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4N38_RS14600 PF00293 NUDIX domain J4N38_RS14600 PF09297 NADH pyrophosphatase zinc ribbon domain J4N38_RS14605 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ J4N38_RS14610 PF03606 C4-dicarboxylate anaerobic carrier J4N38_RS14620 PF00696 Amino acid kinase family J4N38_RS14625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N38_RS14625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N38_RS14630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N38_RS14630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N38_RS14635 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain J4N38_RS14635 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain J4N38_RS14640 PF02863 Arginine repressor, C-terminal domain J4N38_RS14640 PF01316 Arginine repressor, DNA binding domain J4N38_RS14645 PF11412 Disulphide bond corrector protein DsbC J4N38_RS14645 PF02683 Cytochrome C biogenesis protein transmembrane region J4N38_RS14650 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS14650 PF00072 Response regulator receiver domain J4N38_RS14655 PF01914 MarC family integral membrane protein J4N38_RS14665 PF00474 Sodium:solute symporter family J4N38_RS14685 PF00121 Triosephosphate isomerase J4N38_RS14690 PF01554 MatE J4N38_RS14695 PF03737 Aldolase/RraA J4N38_RS14700 PF01040 UbiA prenyltransferase family J4N38_RS14705 PF09285 Elongation factor P, C-terminal J4N38_RS14705 PF08207 Elongation factor P (EF-P) KOW-like domain J4N38_RS14705 PF01132 Elongation factor P (EF-P) OB domain J4N38_RS14710 PF04055 Radical SAM superfamily J4N38_RS14720 PF02308 MgtC family J4N38_RS14725 PF00365 Phosphofructokinase J4N38_RS14730 PF16916 Dimerisation domain of Zinc Transporter J4N38_RS14730 PF01545 Cation efflux family J4N38_RS14740 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS14740 PF00072 Response regulator receiver domain J4N38_RS14745 PF16527 Two-component sensor protein CpxA, periplasmic domain J4N38_RS14745 PF00672 HAMP domain J4N38_RS14745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS14745 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS14750 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4N38_RS14750 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4N38_RS14755 PF00588 SpoU rRNA Methylase family J4N38_RS14760 PF00579 tRNA synthetases class I (W and Y) J4N38_RS14765 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS14770 PF00834 Ribulose-phosphate 3 epimerase family J4N38_RS14775 PF02086 D12 class N6 adenine-specific DNA methyltransferase J4N38_RS14785 PF01761 3-dehydroquinate synthase J4N38_RS14790 PF01202 Shikimate kinase J4N38_RS14795 PF07660 Secretin and TonB N terminus short domain J4N38_RS14795 PF03958 Bacterial type II/III secretion system short domain J4N38_RS14795 PF00263 Bacterial type II and III secretion system protein J4N38_RS14795 PF11741 AMIN domain J4N38_RS14810 PF05137 Fimbrial assembly protein (PilN) J4N38_RS14820 PF17092 Penicillin-binding protein OB-like domain J4N38_RS14820 PF00905 Penicillin binding protein transpeptidase domain J4N38_RS14820 PF00912 Transglycosylase J4N38_RS14825 PF03466 LysR substrate binding domain J4N38_RS14825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS14830 PF00462 Glutaredoxin J4N38_RS14830 PF08534 Redoxin J4N38_RS14835 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS14835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N38_RS14840 PF01042 Endoribonuclease L-PSP J4N38_RS14850 PF00583 Acetyltransferase (GNAT) family J4N38_RS14850 PF14698 Argininosuccinate lyase C-terminal J4N38_RS14850 PF00206 Lyase J4N38_RS14855 PF00764 Arginosuccinate synthase J4N38_RS14860 PF00696 Amino acid kinase family J4N38_RS14865 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N38_RS14865 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N38_RS14870 PF07687 Peptidase dimerisation domain J4N38_RS14870 PF01546 Peptidase family M20/M25/M40 J4N38_RS14935 PF01177 Asp/Glu/Hydantoin racemase J4N38_RS14945 PF07715 TonB-dependent Receptor Plug Domain J4N38_RS14945 PF00593 TonB dependent receptor J4N38_RS14950 PF05958 tRNA (Uracil-5-)-methyltransferase J4N38_RS14960 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS14965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N38_RS14965 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS14970 PF01554 MatE J4N38_RS14980 PF01726 LexA DNA binding domain J4N38_RS14980 PF00717 Peptidase S24-like J4N38_RS14985 PF01219 Prokaryotic diacylglycerol kinase J4N38_RS14990 PF01553 Acyltransferase J4N38_RS14995 PF01040 UbiA prenyltransferase family J4N38_RS15000 PF04345 Chorismate lyase J4N38_RS15005 PF03748 Flagellar basal body-associated protein FliL J4N38_RS15010 PF01694 Rhomboid family J4N38_RS15010 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease J4N38_RS15015 PF00581 Rhodanese-like domain J4N38_RS15020 PF00140 Sigma-70 factor, region 1.2 J4N38_RS15020 PF04542 Sigma-70 region 2 J4N38_RS15020 PF04545 Sigma-70, region 4 J4N38_RS15025 PF18075 FtsX extracellular domain J4N38_RS15030 PF00005 ABC transporter J4N38_RS15035 PF02881 SRP54-type protein, helical bundle domain J4N38_RS15035 PF00448 SRP54-type protein, GTPase domain J4N38_RS15050 PF01914 MarC family integral membrane protein J4N38_RS15095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N38_RS15095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N38_RS15100 PF01022 Bacterial regulatory protein, arsR family J4N38_RS15105 PF08668 HDOD domain J4N38_RS15105 PF00563 EAL domain J4N38_RS15110 PF01810 LysE type translocator J4N38_RS15115 PF12146 Serine aminopeptidase, S33 J4N38_RS15135 PF03942 DTW domain J4N38_RS15140 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS15145 PF02899 Phage integrase, N-terminal SAM-like domain J4N38_RS15145 PF00589 Phage integrase family J4N38_RS15155 PF01678 Diaminopimelate epimerase J4N38_RS15160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N38_RS15160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N38_RS15170 PF01491 Frataxin-like domain J4N38_RS15175 PF12633 Adenylate cyclase NT domain J4N38_RS15175 PF01295 Adenylate cyclase, class-I J4N38_RS15180 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4N38_RS15180 PF03900 Porphobilinogen deaminase, C-terminal domain J4N38_RS15185 PF02602 Uroporphyrinogen-III synthase HemD J4N38_RS15190 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase J4N38_RS15195 PF07219 HemY protein N-terminus J4N38_RS15220 PF00175 Oxidoreductase NAD-binding domain J4N38_RS15225 PF00970 Oxidoreductase FAD-binding domain J4N38_RS15225 PF00175 Oxidoreductase NAD-binding domain J4N38_RS15225 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS15230 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J4N38_RS15240 PF07497 Rho termination factor, RNA-binding domain J4N38_RS15240 PF07498 Rho termination factor, N-terminal domain J4N38_RS15240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_RS15245 PF00085 Thioredoxin J4N38_RS15250 PF00270 DEAD/DEAH box helicase J4N38_RS15250 PF00271 Helicase conserved C-terminal domain J4N38_RS15255 PF02541 Ppx/GppA phosphatase family J4N38_RS15260 PF02592 Putative vitamin uptake transporter J4N38_RS15270 PF09382 RQC domain J4N38_RS15270 PF16124 RecQ zinc-binding J4N38_RS15270 PF00570 HRDC domain J4N38_RS15270 PF00271 Helicase conserved C-terminal domain J4N38_RS15270 PF00270 DEAD/DEAH box helicase J4N38_RS15275 PF00892 EamA-like transporter family J4N38_RS15285 PF01810 LysE type translocator J4N38_RS15295 PF00580 UvrD/REP helicase N-terminal domain J4N38_RS15295 PF13361 UvrD-like helicase C-terminal domain J4N38_RS15305 PF05114 Protein of unknown function (DUF692) J4N38_RS15320 PF01432 Peptidase family M3 J4N38_RS15325 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4N38_RS15330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N38_RS15330 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS15345 PF01494 FAD binding domain J4N38_RS15350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS15350 PF03466 LysR substrate binding domain J4N38_RS15355 PF03306 Alpha-acetolactate decarboxylase J4N38_RS15360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_RS15360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_RS15360 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_RS15375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_RS15385 PF12833 Helix-turn-helix domain J4N38_RS15390 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4N38_RS15390 PF07971 Glycosyl hydrolase family 92 J4N38_RS15400 PF07971 Glycosyl hydrolase family 92 J4N38_RS15400 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4N38_RS15410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_RS15410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_RS15430 PF00083 Sugar (and other) transporter J4N38_RS15450 PF00072 Response regulator receiver domain J4N38_RS15450 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS15465 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS15465 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_RS15470 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS15475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS15480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS15480 PF00005 ABC transporter J4N38_RS15510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N38_RS15515 PF13361 UvrD-like helicase C-terminal domain J4N38_RS15515 PF00580 UvrD/REP helicase N-terminal domain J4N38_RS15520 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS15525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_RS15530 PF00873 AcrB/AcrD/AcrF family J4N38_RS15535 PF04380 Membrane fusogenic activity J4N38_RS15540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4N38_RS15540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4N38_RS15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS15545 PF03466 LysR substrate binding domain J4N38_RS15550 PF06969 HemN C-terminal domain J4N38_RS15550 PF04055 Radical SAM superfamily J4N38_RS15560 PF04220 Der GTPase activator (YihI) J4N38_RS15570 PF00034 Cytochrome c J4N38_RS15575 PF01926 50S ribosome-binding GTPase J4N38_RS15580 PF01612 3'-5' exonuclease J4N38_RS15580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4N38_RS15580 PF01367 5'-3' exonuclease, C-terminal SAM fold J4N38_RS15580 PF00476 DNA polymerase family A J4N38_RS15590 PF00490 Delta-aminolevulinic acid dehydratase J4N38_RS15595 PF01026 TatD related DNase J4N38_RS15600 PF00902 Sec-independent protein translocase protein (TatC) J4N38_RS15605 PF02416 mttA/Hcf106 family J4N38_RS15610 PF02416 mttA/Hcf106 family J4N38_RS15615 PF03109 ABC1 family J4N38_RS15620 PF02036 SCP-2 sterol transfer family J4N38_RS15625 PF01209 ubiE/COQ5 methyltransferase family J4N38_RS15630 PF02646 RmuC family J4N38_RS15640 PF08668 HDOD domain J4N38_RS15655 PF01117 Aerolysin toxin J4N38_RS15655 PF03440 Aerolysin/Pertussis toxin (APT) domain J4N38_RS15665 PF10625 Universal stress protein B (UspB) J4N38_RS15670 PF00210 Ferritin-like domain J4N38_RS15675 PF00582 Universal stress protein family J4N38_RS15680 PF00892 EamA-like transporter family J4N38_RS15690 PF04445 Putative SAM-dependent methyltransferase J4N38_RS15695 PF00563 EAL domain J4N38_RS15695 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS15695 PF08448 PAS fold J4N38_RS15700 PF01037 Lrp/AsnC ligand binding domain J4N38_RS15710 PF07690 Major Facilitator Superfamily J4N38_RS15715 PF03466 LysR substrate binding domain J4N38_RS15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS15720 PF01321 Creatinase/Prolidase N-terminal domain J4N38_RS15720 PF01321 Creatinase/Prolidase N-terminal domain J4N38_RS15720 PF00557 Metallopeptidase family M24 J4N38_RS15720 PF00557 Metallopeptidase family M24 J4N38_RS15725 PF04055 Radical SAM superfamily J4N38_RS15725 PF06968 Biotin and Thiamin Synthesis associated domain J4N38_RS15730 PF05690 Thiazole biosynthesis protein ThiG J4N38_RS15740 PF00899 ThiF family J4N38_RS15745 PF02581 Thiamine monophosphate synthase J4N38_RS15750 PF13667 ThiC-associated domain J4N38_RS15750 PF01964 Radical SAM ThiC family J4N38_RS15755 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4N38_RS15760 PF07731 Multicopper oxidase J4N38_RS15760 PF07732 Multicopper oxidase J4N38_RS15760 PF00394 Multicopper oxidase J4N38_RS15800 PF12724 Flavodoxin domain J4N38_RS15805 PF02386 Cation transport protein J4N38_RS15810 PF09186 Domain of unknown function (DUF1949) J4N38_RS15810 PF01205 Uncharacterized protein family UPF0029 J4N38_RS15815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4N38_RS15815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4N38_RS15815 PF00378 Enoyl-CoA hydratase/isomerase J4N38_RS15820 PF02803 Thiolase, C-terminal domain J4N38_RS15820 PF00108 Thiolase, N-terminal domain J4N38_RS15825 PF03466 LysR substrate binding domain J4N38_RS15825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS15830 PF07690 Major Facilitator Superfamily J4N38_RS15835 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS15840 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS15845 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS15845 PF12804 MobA-like NTP transferase domain J4N38_RS15850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4N38_RS15850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4N38_RS15855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_RS15855 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N38_RS15860 PF00231 ATP synthase J4N38_RS15865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N38_RS15865 PF00306 ATP synthase alpha/beta chain, C terminal domain J4N38_RS15865 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N38_RS15870 PF00213 ATP synthase delta (OSCP) subunit J4N38_RS15875 PF00430 ATP synthase B/B' CF(0) J4N38_RS15880 PF00137 ATP synthase subunit C J4N38_RS15885 PF00119 ATP synthase A chain J4N38_RS15890 PF03899 ATP synthase I chain J4N38_RS15895 PF17762 HTH domain found in ParB protein J4N38_RS15895 PF02195 ParB-like nuclease domain J4N38_RS15900 PF13614 AAA domain J4N38_RS15905 PF02527 rRNA small subunit methyltransferase G J4N38_RS15910 PF01134 Glucose inhibited division protein A J4N38_RS15910 PF13932 GidA associated domain J4N38_RS15915 PF00258 Flavodoxin J4N38_RS15920 PF12631 MnmE helical domain J4N38_RS15920 PF01926 50S ribosome-binding GTPase J4N38_RS15920 PF10396 GTP-binding protein TrmE N-terminus J4N38_RS15925 PF14849 YidC periplasmic domain J4N38_RS15925 PF02096 60Kd inner membrane protein J4N38_RS15930 PF01809 Putative membrane protein insertion efficiency factor J4N38_RS15935 PF00825 Ribonuclease P J4N38_RS15940 PF00468 Ribosomal protein L34 J4N38_RS15945 PF00005 ABC transporter J4N38_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS15955 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS15960 PF18607 ParA helix turn helix domain J4N38_RS15960 PF13614 AAA domain J4N38_RS15965 PF02195 ParB-like nuclease domain J4N38_RS15965 PF08775 ParB family J4N38_RS15970 PF05127 Helicase J4N38_RS15970 PF13718 GNAT acetyltransferase 2 J4N38_RS15980 PF00072 Response regulator receiver domain J4N38_RS15985 PF02895 Signal transducing histidine kinase, homodimeric domain J4N38_RS15985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS15985 PF01627 Hpt domain J4N38_RS15985 PF09078 CheY binding J4N38_RS15985 PF01584 CheW-like domain J4N38_RS15990 PF01584 CheW-like domain J4N38_RS15995 PF01584 CheW-like domain J4N38_RS16000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS16000 PF02203 Tar ligand binding domain homologue J4N38_RS16000 PF00672 HAMP domain J4N38_RS16005 PF01739 CheR methyltransferase, SAM binding domain J4N38_RS16005 PF03705 CheR methyltransferase, all-alpha domain J4N38_RS16010 PF03975 CheD chemotactic sensory transduction J4N38_RS16015 PF01339 CheB methylesterase J4N38_RS16015 PF00072 Response regulator receiver domain J4N38_RS16020 PF02743 Cache domain J4N38_RS16020 PF00672 HAMP domain J4N38_RS16020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS16030 PF00072 Response regulator receiver domain J4N38_RS16030 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS16040 PF07690 Major Facilitator Superfamily J4N38_RS16050 PF00893 Small Multidrug Resistance protein J4N38_RS16055 PF03466 LysR substrate binding domain J4N38_RS16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS16080 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS16085 PF17912 MalK OB fold domain J4N38_RS16085 PF03459 TOBE domain J4N38_RS16085 PF00005 ABC transporter J4N38_RS16090 PF00582 Universal stress protein family J4N38_RS16095 PF00232 Glycosyl hydrolase family 1 J4N38_RS16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16125 PF03466 LysR substrate binding domain J4N38_RS16140 PF08543 Phosphomethylpyrimidine kinase J4N38_RS16145 PF03070 TENA/THI-4/PQQC family J4N38_RS16155 PF01925 Sulfite exporter TauE/SafE J4N38_RS16165 PF12833 Helix-turn-helix domain J4N38_RS16165 PF01965 DJ-1/PfpI family J4N38_RS16170 PF03466 LysR substrate binding domain J4N38_RS16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16180 PF01569 PAP2 superfamily J4N38_RS16200 PF03466 LysR substrate binding domain J4N38_RS16200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16210 PF03466 LysR substrate binding domain J4N38_RS16215 PF00698 Acyl transferase domain J4N38_RS16215 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_RS16215 PF09277 Erythronolide synthase, docking J4N38_RS16215 PF16197 Ketoacyl-synthetase C-terminal extension J4N38_RS16215 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N38_RS16215 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N38_RS16215 PF08659 KR domain J4N38_RS16215 PF00550 Phosphopantetheine attachment site J4N38_RS16215 PF14765 Polyketide synthase dehydratase J4N38_RS16215 PF08990 Erythronolide synthase docking J4N38_RS16220 PF01042 Endoribonuclease L-PSP J4N38_RS16225 PF00892 EamA-like transporter family J4N38_RS16260 PF00939 Sodium:sulfate symporter transmembrane region J4N38_RS16270 PF07690 Major Facilitator Superfamily J4N38_RS16275 PF05221 S-adenosyl-L-homocysteine hydrolase J4N38_RS16275 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J4N38_RS16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS16280 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS16305 PF03466 LysR substrate binding domain J4N38_RS16305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16310 PF01609 Transposase DDE domain J4N38_RS16310 PF13006 Insertion element 4 transposase N-terminal J4N38_RS16320 PF06029 AlkA N-terminal domain J4N38_RS16320 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N38_RS16325 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4N38_RS16325 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4N38_RS16335 PF03600 Citrate transporter J4N38_RS16345 PF12833 Helix-turn-helix domain J4N38_RS16350 PF07715 TonB-dependent Receptor Plug Domain J4N38_RS16350 PF00593 TonB dependent receptor J4N38_RS16360 PF00072 Response regulator receiver domain J4N38_RS16360 PF01627 Hpt domain J4N38_RS16360 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS16360 PF00672 HAMP domain J4N38_RS16360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_RS16365 PF01979 Amidohydrolase family J4N38_RS16375 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J4N38_RS16375 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J4N38_RS16380 PF00941 FAD binding domain in molybdopterin dehydrogenase J4N38_RS16380 PF03450 CO dehydrogenase flavoprotein C-terminal domain J4N38_RS16385 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS16385 PF07729 FCD domain J4N38_RS16395 PF01979 Amidohydrolase family J4N38_RS16400 PF00082 Subtilase family J4N38_RS16400 PF05922 Peptidase inhibitor I9 J4N38_RS16400 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_RS16405 PF17200 Single Cache domain 2 J4N38_RS16405 PF00672 HAMP domain J4N38_RS16405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS16420 PF10928 Protein of unknown function (DUF2810) J4N38_RS16430 PF00583 Acetyltransferase (GNAT) family J4N38_RS16435 PF03466 LysR substrate binding domain J4N38_RS16435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16440 PF01609 Transposase DDE domain J4N38_RS16440 PF13006 Insertion element 4 transposase N-terminal J4N38_RS16445 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS16445 PF17874 MalT-like TPR region J4N38_RS16450 PF00343 Carbohydrate phosphorylase J4N38_RS16455 PF02446 4-alpha-glucanotransferase J4N38_RS16460 PF00128 Alpha amylase, catalytic domain J4N38_RS16460 PF02806 Alpha amylase, C-terminal all-beta domain J4N38_RS16460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N38_RS16480 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N38_RS16480 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4N38_RS16485 PF07075 Protein of unknown function (DUF1343) J4N38_RS16500 PF13340 Putative transposase of IS4/5 family (DUF4096) J4N38_RS16505 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N38_RS16570 PF00005 ABC transporter J4N38_RS16570 PF12848 ABC transporter J4N38_RS16575 PF01717 Cobalamin-independent synthase, Catalytic domain J4N38_RS16575 PF08267 Cobalamin-independent synthase, N-terminal domain J4N38_RS16595 PF01638 HxlR-like helix-turn-helix J4N38_RS16600 PF00583 Acetyltransferase (GNAT) family J4N38_RS16605 PF00202 Aminotransferase class-III J4N38_RS16610 PF06339 Ectoine synthase J4N38_RS16615 PF00696 Amino acid kinase family J4N38_RS16615 PF13840 ACT domain J4N38_RS16625 PF00881 Nitroreductase family J4N38_RS16630 PF01418 Helix-turn-helix domain, rpiR family J4N38_RS16630 PF01380 SIS domain J4N38_RS16635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_RS16640 PF09261 Alpha mannosidase middle domain J4N38_RS16640 PF07748 Glycosyl hydrolases family 38 C-terminal domain J4N38_RS16640 PF01074 Glycosyl hydrolases family 38 N-terminal domain J4N38_RS16645 PF00128 Alpha amylase, catalytic domain J4N38_RS16650 PF02378 Phosphotransferase system, EIIC J4N38_RS16650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_RS16650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_RS16670 PF00490 Delta-aminolevulinic acid dehydratase J4N38_RS16675 PF02803 Thiolase, C-terminal domain J4N38_RS16675 PF00108 Thiolase, N-terminal domain J4N38_RS16685 PF05853 beta-keto acid cleavage enzyme J4N38_RS16695 PF01758 Sodium Bile acid symporter family J4N38_RS16700 PF01609 Transposase DDE domain J4N38_RS16700 PF13006 Insertion element 4 transposase N-terminal J4N38_RS16715 PF03466 LysR substrate binding domain J4N38_RS16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16720 PF01039 Carboxyl transferase domain J4N38_RS16720 PF17848 Acetyl-coA carboxylase zinc finger domain J4N38_RS16730 PF02028 BCCT, betaine/carnitine/choline family transporter J4N38_RS16735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_RS16735 PF00672 HAMP domain J4N38_RS16735 PF00072 Response regulator receiver domain J4N38_RS16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS16735 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS16735 PF01627 Hpt domain J4N38_RS16745 PF00795 Carbon-nitrogen hydrolase J4N38_RS16750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_RS16755 PF08241 Methyltransferase domain J4N38_RS16775 PF07859 alpha/beta hydrolase fold J4N38_RS16785 PF00005 ABC transporter J4N38_RS16785 PF00571 CBS domain J4N38_RS16790 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS16800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS16800 PF12793 Sugar transport-related sRNA regulator N-term J4N38_RS16805 PF00881 Nitroreductase family J4N38_RS16810 PF01914 MarC family integral membrane protein J4N38_RS16820 PF03466 LysR substrate binding domain J4N38_RS16820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS16845 PF13629 Pilus formation protein N terminal region J4N38_RS16845 PF00263 Bacterial type II and III secretion system protein J4N38_RS16845 PF04972 BON domain J4N38_RS16855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N38_RS16860 PF00437 Type II/IV secretion system protein J4N38_RS16910 PF02424 ApbE family J4N38_RS16915 PF02683 Cytochrome C biogenesis protein transmembrane region J4N38_RS16915 PF11412 Disulphide bond corrector protein DsbC J4N38_RS16920 PF00171 Aldehyde dehydrogenase family J4N38_RS16925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS16925 PF00672 HAMP domain J4N38_RS16925 PF17200 Single Cache domain 2 J4N38_RS16930 PF12849 PBP superfamily domain J4N38_RS16935 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS16940 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS16945 PF00005 ABC transporter J4N38_RS16950 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS16950 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS16950 PF00563 EAL domain J4N38_RS16960 PF00375 Sodium:dicarboxylate symporter family J4N38_RS16965 PF03193 RsgA GTPase J4N38_RS16970 PF12945 Flagellar protein YcgR J4N38_RS16970 PF07238 PilZ domain J4N38_RS16975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4N38_RS16995 PF00583 Acetyltransferase (GNAT) family J4N38_RS17005 PF07238 PilZ domain J4N38_RS17005 PF12945 Flagellar protein YcgR J4N38_RS17020 PF13302 Acetyltransferase (GNAT) domain J4N38_RS17030 PF00588 SpoU rRNA Methylase family J4N38_RS17030 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4N38_RS17035 PF00037 4Fe-4S binding domain J4N38_RS17035 PF11953 Domain of unknown function (DUF3470) J4N38_RS17055 PF13443 Cro/C1-type HTH DNA-binding domain J4N38_RS17060 PF03466 LysR substrate binding domain J4N38_RS17060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS17065 PF00764 Arginosuccinate synthase J4N38_RS17080 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N38_RS17100 PF00873 AcrB/AcrD/AcrF family J4N38_RS17110 PF07670 Nucleoside recognition J4N38_RS17115 PF00175 Oxidoreductase NAD-binding domain J4N38_RS17115 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS17115 PF00970 Oxidoreductase FAD-binding domain J4N38_RS17120 PF03063 Prismane/CO dehydrogenase family J4N38_RS17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS17130 PF03466 LysR substrate binding domain J4N38_RS17145 PF00158 Sigma-54 interaction domain J4N38_RS17145 PF01590 GAF domain J4N38_RS17150 PF02311 AraC-like ligand binding domain J4N38_RS17150 PF12833 Helix-turn-helix domain J4N38_RS17175 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J4N38_RS17185 PF03992 Antibiotic biosynthesis monooxygenase J4N38_RS17190 PF03733 Inner membrane component domain J4N38_RS17200 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS17205 PF00155 Aminotransferase class I and II J4N38_RS17210 PF03466 LysR substrate binding domain J4N38_RS17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS17215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS17225 PF03413 Peptidase propeptide and YPEB domain J4N38_RS17225 PF01447 Thermolysin metallopeptidase, catalytic domain J4N38_RS17225 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4N38_RS17225 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_RS17225 PF07504 Fungalysin/Thermolysin Propeptide Motif J4N38_RS17230 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_RS17230 PF04389 Peptidase family M28 J4N38_RS17255 PF00909 Ammonium Transporter Family J4N38_RS17260 PF00072 Response regulator receiver domain J4N38_RS17270 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS17270 PF04324 BFD-like [2Fe-2S] binding domain J4N38_RS17275 PF01266 FAD dependent oxidoreductase J4N38_RS17295 PF08525 Opacity-associated protein A N-terminal motif J4N38_RS17295 PF01476 LysM domain J4N38_RS17295 PF01551 Peptidase family M23 J4N38_RS17300 PF03922 OmpW family J4N38_RS17310 PF00082 Subtilase family J4N38_RS17315 PF12729 Four helix bundle sensory module for signal transduction J4N38_RS17315 PF00672 HAMP domain J4N38_RS17315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS17325 PF09278 MerR, DNA binding J4N38_RS17325 PF00376 MerR family regulatory protein J4N38_RS17340 PF07690 Major Facilitator Superfamily J4N38_RS17345 PF00474 Sodium:solute symporter family J4N38_RS17365 PF03358 NADPH-dependent FMN reductase J4N38_RS17370 PF00892 EamA-like transporter family J4N38_RS17380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N38_RS17380 PF18494 Pullulanase Ins domain J4N38_RS17380 PF17967 Pullulanase N2 domain J4N38_RS17380 PF03714 Bacterial pullanase-associated domain J4N38_RS17380 PF11852 Domain of unknown function (DUF3372) J4N38_RS17395 PF14489 QueF-like protein J4N38_RS17395 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4N38_RS17400 PF12833 Helix-turn-helix domain J4N38_RS17400 PF01497 Periplasmic binding protein J4N38_RS17405 PF00155 Aminotransferase class I and II J4N38_RS17410 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS17410 PF00155 Aminotransferase class I and II J4N38_RS17420 PF01037 Lrp/AsnC ligand binding domain J4N38_RS17430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS17430 PF00672 HAMP domain J4N38_RS17435 PF01625 Peptide methionine sulfoxide reductase J4N38_RS17435 PF01641 SelR domain J4N38_RS17440 PF13599 Pentapeptide repeats (9 copies) J4N38_RS17455 PF00563 EAL domain J4N38_RS17455 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS17455 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS17460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4N38_RS17470 PF00873 AcrB/AcrD/AcrF family J4N38_RS17475 PF00873 AcrB/AcrD/AcrF family J4N38_RS17485 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS17485 PF13977 BetI-type transcriptional repressor, C-terminal J4N38_RS17500 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS17500 PF00072 Response regulator receiver domain J4N38_RS17505 PF00672 HAMP domain J4N38_RS17505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS17505 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS17505 PF13426 PAS domain J4N38_RS17510 PF13673 Acetyltransferase (GNAT) domain J4N38_RS17525 PF01627 Hpt domain J4N38_RS17525 PF00672 HAMP domain J4N38_RS17525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS17525 PF17149 Periplasmic sensor domain found in signal transduction proteins J4N38_RS17525 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS17525 PF00072 Response regulator receiver domain J4N38_RS17540 PF10415 Fumarase C C-terminus J4N38_RS17540 PF00206 Lyase J4N38_RS17565 PF00581 Rhodanese-like domain J4N38_RS17565 PF17773 UPF0176 acylphosphatase like domain J4N38_RS17590 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_RS17600 PF00491 Arginase family J4N38_RS17605 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS17605 PF00155 Aminotransferase class I and II J4N38_RS17615 PF07885 Ion channel J4N38_RS17635 PF01323 DSBA-like thioredoxin domain J4N38_RS17645 PF01638 HxlR-like helix-turn-helix J4N38_RS17660 PF03795 YCII-related domain J4N38_RS17665 PF04542 Sigma-70 region 2 J4N38_RS17665 PF08281 Sigma-70, region 4 J4N38_RS17670 PF02798 Glutathione S-transferase, N-terminal domain J4N38_RS17675 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS17680 PF00128 Alpha amylase, catalytic domain J4N38_RS17700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N38_RS17700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_RS17705 PF00141 Peroxidase J4N38_RS17715 PF16884 N-terminal domain of oxidoreductase J4N38_RS17715 PF00107 Zinc-binding dehydrogenase J4N38_RS17720 PF16925 Tetracyclin repressor-like, C-terminal domain J4N38_RS17720 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS17725 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS17735 PF04266 ASCH domain J4N38_RS17740 PF00271 Helicase conserved C-terminal domain J4N38_RS17740 PF00270 DEAD/DEAH box helicase J4N38_RS17750 PF01979 Amidohydrolase family J4N38_RS17765 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS17780 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS17785 PF03633 Glycosyl hydrolase family 65, C-terminal domain J4N38_RS17785 PF03632 Glycosyl hydrolase family 65 central catalytic domain J4N38_RS17785 PF03636 Glycosyl hydrolase family 65, N-terminal domain J4N38_RS17790 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS17795 PF00005 ABC transporter J4N38_RS17795 PF08402 TOBE domain J4N38_RS17805 PF08244 Glycosyl hydrolases family 32 C terminal J4N38_RS17805 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4N38_RS17810 PF00128 Alpha amylase, catalytic domain J4N38_RS17815 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS17830 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS17835 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS17840 PF03459 TOBE domain J4N38_RS17840 PF17912 MalK OB fold domain J4N38_RS17840 PF00005 ABC transporter J4N38_RS17845 PF01915 Glycosyl hydrolase family 3 C-terminal domain J4N38_RS17845 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N38_RS17845 PF14310 Fibronectin type III-like domain J4N38_RS17855 PF00128 Alpha amylase, catalytic domain J4N38_RS17860 PF14602 Hexapeptide repeat of succinyl-transferase J4N38_RS17860 PF12464 Maltose acetyltransferase J4N38_RS17885 PF04231 Endonuclease I J4N38_RS17900 PF00849 RNA pseudouridylate synthase J4N38_RS17910 PF00756 Putative esterase J4N38_RS17915 PF00107 Zinc-binding dehydrogenase J4N38_RS17915 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_RS17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS17920 PF03466 LysR substrate binding domain J4N38_RS17925 PF07690 Major Facilitator Superfamily J4N38_RS17940 PF01810 LysE type translocator J4N38_RS17945 PF01037 Lrp/AsnC ligand binding domain J4N38_RS17950 PF02824 TGS domain J4N38_RS17950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N38_RS17950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N38_RS17950 PF03129 Anticodon binding domain J4N38_RS17955 PF00707 Translation initiation factor IF-3, C-terminal domain J4N38_RS17955 PF05198 Translation initiation factor IF-3, N-terminal domain J4N38_RS17960 PF01632 Ribosomal protein L35 J4N38_RS17965 PF00453 Ribosomal protein L20 J4N38_RS17970 PF01266 FAD dependent oxidoreductase J4N38_RS17990 PF00171 Aldehyde dehydrogenase family J4N38_RS17995 PF01590 GAF domain J4N38_RS17995 PF02954 Bacterial regulatory protein, Fis family J4N38_RS17995 PF00158 Sigma-54 interaction domain J4N38_RS18020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_RS18020 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4N38_RS18025 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4N38_RS18030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4N38_RS18030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4N38_RS18035 PF01966 HD domain J4N38_RS18055 PF07690 Major Facilitator Superfamily J4N38_RS18060 PF05231 MASE1 J4N38_RS18060 PF07730 Histidine kinase J4N38_RS18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS18065 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS18065 PF00072 Response regulator receiver domain J4N38_RS18070 PF07690 Major Facilitator Superfamily J4N38_RS18085 PF01979 Amidohydrolase family J4N38_RS18090 PF03473 MOSC domain J4N38_RS18090 PF03476 MOSC N-terminal beta barrel domain J4N38_RS18090 PF03473 MOSC domain J4N38_RS18090 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS18090 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS18090 PF03476 MOSC N-terminal beta barrel domain J4N38_RS18095 PF03472 Autoinducer binding domain J4N38_RS18095 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS18100 PF00455 DeoR C terminal sensor domain J4N38_RS18100 PF08220 DeoR-like helix-turn-helix domain J4N38_RS18120 PF05661 Protein of unknown function (DUF808) J4N38_RS18130 PF00128 Alpha amylase, catalytic domain J4N38_RS18135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS18135 PF00672 HAMP domain J4N38_RS18135 PF02743 Cache domain J4N38_RS18155 PF12849 PBP superfamily domain J4N38_RS18160 PF01575 MaoC like domain J4N38_RS18170 PF01551 Peptidase family M23 J4N38_RS18170 PF08525 Opacity-associated protein A N-terminal motif J4N38_RS18170 PF01476 LysM domain J4N38_RS18180 PF07690 Major Facilitator Superfamily J4N38_RS18185 PF00005 ABC transporter J4N38_RS18190 PF01032 FecCD transport family J4N38_RS18200 PF02472 Biopolymer transport protein ExbD/TolR J4N38_RS18205 PF01618 MotA/TolQ/ExbB proton channel family J4N38_RS18210 PF03544 Gram-negative bacterial TonB protein C-terminal J4N38_RS18215 PF04055 Radical SAM superfamily J4N38_RS18220 PF06228 Haem utilisation ChuX/HutX J4N38_RS18225 PF01243 Pyridoxamine 5'-phosphate oxidase J4N38_RS18230 PF01923 Cobalamin adenosyltransferase J4N38_RS18235 PF08402 TOBE domain J4N38_RS18235 PF00005 ABC transporter J4N38_RS18240 PF01547 Bacterial extracellular solute-binding protein J4N38_RS18245 PF14785 Maltose transport system permease protein MalF P2 domain J4N38_RS18245 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS18250 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS18260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS18260 PF12793 Sugar transport-related sRNA regulator N-term J4N38_RS18285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N38_RS18285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N38_RS18300 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS18300 PF01627 Hpt domain J4N38_RS18300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS18300 PF00672 HAMP domain J4N38_RS18300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_RS18300 PF00072 Response regulator receiver domain J4N38_RS18305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N38_RS18310 PF03741 Integral membrane protein TerC family J4N38_RS18315 PF07969 Amidohydrolase family J4N38_RS18320 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4N38_RS18325 PF00529 HlyD membrane-fusion protein of T1SS J4N38_RS18325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_RS18350 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS18350 PF00072 Response regulator receiver domain J4N38_RS18355 PF00672 HAMP domain J4N38_RS18355 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS18355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS18365 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS18365 PF00155 Aminotransferase class I and II J4N38_RS18370 PF13230 Glutamine amidotransferases class-II J4N38_RS18375 PF13520 Amino acid permease J4N38_RS18385 PF03466 LysR substrate binding domain J4N38_RS18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS18395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N38_RS18400 PF02566 OsmC-like protein J4N38_RS18405 PF13006 Insertion element 4 transposase N-terminal J4N38_RS18405 PF01609 Transposase DDE domain J4N38_RS18410 PF14602 Hexapeptide repeat of succinyl-transferase J4N38_RS18410 PF12464 Maltose acetyltransferase J4N38_RS18415 PF00892 EamA-like transporter family J4N38_RS18435 PF07584 Aerotolerance regulator N-terminal J4N38_RS18435 PF13519 von Willebrand factor type A domain J4N38_RS18440 PF07584 Aerotolerance regulator N-terminal J4N38_RS18440 PF00092 von Willebrand factor type A domain J4N38_RS18450 PF01882 Protein of unknown function DUF58 J4N38_RS18455 PF17863 AAA lid domain J4N38_RS18455 PF07726 ATPase family associated with various cellular activities (AAA) J4N38_RS18460 PF02743 Cache domain J4N38_RS18460 PF00672 HAMP domain J4N38_RS18460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS18485 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS18485 PF18719 ArlS sensor domain J4N38_RS18485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS18490 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS18490 PF00072 Response regulator receiver domain J4N38_RS18495 PF03150 Di-haem cytochrome c peroxidase J4N38_RS18500 PF00072 Response regulator receiver domain J4N38_RS18500 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS18505 PF00672 HAMP domain J4N38_RS18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS18505 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS18510 PF06123 Inner membrane protein CreD J4N38_RS18515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_RS18520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS18520 PF03466 LysR substrate binding domain J4N38_RS18525 PF00155 Aminotransferase class I and II J4N38_RS18530 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_RS18530 PF00107 Zinc-binding dehydrogenase J4N38_RS18535 PF00194 Eukaryotic-type carbonic anhydrase J4N38_RS18545 PF07670 Nucleoside recognition J4N38_RS18545 PF07662 Na+ dependent nucleoside transporter C-terminus J4N38_RS18545 PF01773 Na+ dependent nucleoside transporter N-terminus J4N38_RS18550 PF01546 Peptidase family M20/M25/M40 J4N38_RS18550 PF07687 Peptidase dimerisation domain J4N38_RS18575 PF00072 Response regulator receiver domain J4N38_RS18575 PF09456 RcsC Alpha-Beta-Loop (ABL) J4N38_RS18575 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS18575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS18580 PF00072 Response regulator receiver domain J4N38_RS18580 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS18580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS18580 PF09456 RcsC Alpha-Beta-Loop (ABL) J4N38_RS18585 PF00672 HAMP domain J4N38_RS18585 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS18585 PF01627 Hpt domain J4N38_RS18585 PF00072 Response regulator receiver domain J4N38_RS18585 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_RS18585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS18595 PF03466 LysR substrate binding domain J4N38_RS18595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS18605 PF13193 AMP-binding enzyme C-terminal domain J4N38_RS18605 PF00501 AMP-binding enzyme J4N38_RS18610 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J4N38_RS18615 PF01329 Pterin 4 alpha carbinolamine dehydratase J4N38_RS18650 PF07549 SecD/SecF GG Motif J4N38_RS18650 PF13721 SecD export protein N-terminal TM region J4N38_RS18650 PF02355 Protein export membrane protein J4N38_RS18655 PF07549 SecD/SecF GG Motif J4N38_RS18655 PF02355 Protein export membrane protein J4N38_RS18680 PF00465 Iron-containing alcohol dehydrogenase J4N38_RS18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS18695 PF03466 LysR substrate binding domain J4N38_RS18700 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS18725 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS18730 PF00202 Aminotransferase class-III J4N38_RS18735 PF00266 Aminotransferase class-V J4N38_RS18745 PF00005 ABC transporter J4N38_RS18750 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS18755 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS18755 PF07702 UTRA domain J4N38_RS18770 PF18027 Cytosolic carboxypeptidase N-terminal domain J4N38_RS18770 PF00246 Zinc carboxypeptidase J4N38_RS18775 PF01266 FAD dependent oxidoreductase J4N38_RS18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS18780 PF03466 LysR substrate binding domain J4N38_RS18785 PF03313 Serine dehydratase alpha chain J4N38_RS18785 PF03315 Serine dehydratase beta chain J4N38_RS18805 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS18810 PF00072 Response regulator receiver domain J4N38_RS18810 PF01584 CheW-like domain J4N38_RS18825 PF00704 Glycosyl hydrolases family 18 J4N38_RS18825 PF08329 Chitinase A, N-terminal domain J4N38_RS18835 PF01212 Beta-eliminating lyase J4N38_RS18840 PF00293 NUDIX domain J4N38_RS18845 PF12592 Protein of unknown function (DUF3763) J4N38_RS18845 PF07728 AAA domain (dynein-related subfamily) J4N38_RS18845 PF17868 AAA lid domain J4N38_RS18850 PF05762 VWA domain containing CoxE-like protein J4N38_RS18865 PF01037 Lrp/AsnC ligand binding domain J4N38_RS18870 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS18870 PF08448 PAS fold J4N38_RS18875 PF01047 MarR family J4N38_RS18880 PF02028 BCCT, betaine/carnitine/choline family transporter J4N38_RS18895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_RS18900 PF00873 AcrB/AcrD/AcrF family J4N38_RS18905 PF00291 Pyridoxal-phosphate dependent enzyme J4N38_RS18925 PF03222 Tryptophan/tyrosine permease family J4N38_RS18930 PF04336 Acyl carrier protein phosphodiesterase J4N38_RS18935 PF00271 Helicase conserved C-terminal domain J4N38_RS18935 PF00270 DEAD/DEAH box helicase J4N38_RS18940 PF00672 HAMP domain J4N38_RS18940 PF12729 Four helix bundle sensory module for signal transduction J4N38_RS18940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS18945 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS18950 PF00294 pfkB family carbohydrate kinase J4N38_RS18965 PF13419 Haloacid dehalogenase-like hydrolase J4N38_RS18980 PF00384 Molybdopterin oxidoreductase J4N38_RS18980 PF01568 Molydopterin dinucleotide binding domain J4N38_RS18980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N38_RS18985 PF10414 Sirohaem synthase dimerisation region J4N38_RS18985 PF14824 Sirohaem biosynthesis protein central J4N38_RS18985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N38_RS18990 PF00591 Glycosyl transferase family, a/b domain J4N38_RS18990 PF02885 Glycosyl transferase family, helical bundle domain J4N38_RS18995 PF00072 Response regulator receiver domain J4N38_RS18995 PF03861 ANTAR domain J4N38_RS19000 PF00005 ABC transporter J4N38_RS19005 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS19010 PF00005 ABC transporter J4N38_RS19015 PF13806 Rieske-like [2Fe-2S] domain J4N38_RS19015 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N38_RS19015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N38_RS19015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N38_RS19015 PF04324 BFD-like [2Fe-2S] binding domain J4N38_RS19015 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4N38_RS19020 PF00355 Rieske [2Fe-2S] domain J4N38_RS19025 PF03150 Di-haem cytochrome c peroxidase J4N38_RS19040 PF11756 Nitrous oxide-stimulated promoter J4N38_RS19045 PF07690 Major Facilitator Superfamily J4N38_RS19050 PF00085 Thioredoxin J4N38_RS19055 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N38_RS19055 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N38_RS19060 PF00149 Calcineurin-like phosphoesterase J4N38_RS19060 PF12320 Type 5 capsule protein repressor C-terminal domain J4N38_RS19065 PF13476 AAA domain J4N38_RS19070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS19070 PF00072 Response regulator receiver domain J4N38_RS19075 PF00155 Aminotransferase class I and II J4N38_RS19085 PF00654 Voltage gated chloride channel J4N38_RS19090 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4N38_RS19090 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4N38_RS19095 PF01926 50S ribosome-binding GTPase J4N38_RS19105 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS19110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS19110 PF00672 HAMP domain J4N38_RS19120 PF01037 Lrp/AsnC ligand binding domain J4N38_RS19120 PF13404 AsnC-type helix-turn-helix domain J4N38_RS19140 PF08240 Alcohol dehydrogenase GroES-like domain J4N38_RS19140 PF00107 Zinc-binding dehydrogenase J4N38_RS19145 PF02378 Phosphotransferase system, EIIC J4N38_RS19145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_RS19150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_RS19155 PF02779 Transketolase, pyrimidine binding domain J4N38_RS19155 PF02780 Transketolase, C-terminal domain J4N38_RS19155 PF00456 Transketolase, thiamine diphosphate binding domain J4N38_RS19160 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4N38_RS19170 PF03466 LysR substrate binding domain J4N38_RS19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS19185 PF00581 Rhodanese-like domain J4N38_RS19190 PF00899 ThiF family J4N38_RS19195 PF03453 MoeA N-terminal region (domain I and II) J4N38_RS19195 PF03454 MoeA C-terminal region (domain IV) J4N38_RS19195 PF00994 Probable molybdopterin binding domain J4N38_RS19200 PF01227 GTP cyclohydrolase I J4N38_RS19205 PF00271 Helicase conserved C-terminal domain J4N38_RS19205 PF00270 DEAD/DEAH box helicase J4N38_RS19205 PF03880 DbpA RNA binding domain J4N38_RS19210 PF01625 Peptide methionine sulfoxide reductase J4N38_RS19210 PF01641 SelR domain J4N38_RS19240 PF13340 Putative transposase of IS4/5 family (DUF4096) J4N38_RS19245 PF01081 KDPG and KHG aldolase J4N38_RS19250 PF02142 MGS-like domain J4N38_RS19255 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N38_RS19260 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS19260 PF01627 Hpt domain J4N38_RS19260 PF00072 Response regulator receiver domain J4N38_RS19260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS19260 PF00672 HAMP domain J4N38_RS19270 PF00465 Iron-containing alcohol dehydrogenase J4N38_RS19275 PF06719 AraC-type transcriptional regulator N-terminus J4N38_RS19275 PF12833 Helix-turn-helix domain J4N38_RS19280 PF00483 Nucleotidyl transferase J4N38_RS19285 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS19290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N38_RS19290 PF02378 Phosphotransferase system, EIIC J4N38_RS19295 PF00294 pfkB family carbohydrate kinase J4N38_RS19300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N38_RS19300 PF00381 PTS HPr component phosphorylation site J4N38_RS19305 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS19305 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N38_RS19320 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N38_RS19320 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4N38_RS19330 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS19335 PF03459 TOBE domain J4N38_RS19335 PF00005 ABC transporter J4N38_RS19345 PF00360 Phytochrome region J4N38_RS19345 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS19345 PF01590 GAF domain J4N38_RS19345 PF00563 EAL domain J4N38_RS19350 PF07694 5TMR of 5TMR-LYT J4N38_RS19350 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS19365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4N38_RS19365 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4N38_RS19365 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4N38_RS19370 PF02233 NAD(P) transhydrogenase beta subunit J4N38_RS19380 PF00072 Response regulator receiver domain J4N38_RS19380 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS19395 PF03701 Uncharacterised protein family (UPF0181) J4N38_RS19415 PF02463 RecF/RecN/SMC N terminal domain J4N38_RS19450 PF01253 Translation initiation factor SUI1 J4N38_RS19465 PF07478 D-ala D-ala ligase C-terminus J4N38_RS19465 PF01820 D-ala D-ala ligase N-terminus J4N38_RS19470 PF05036 Sporulation related domain J4N38_RS19475 PF00583 Acetyltransferase (GNAT) family J4N38_RS19475 PF13380 CoA binding domain J4N38_RS19475 PF13607 Succinyl-CoA ligase like flavodoxin domain J4N38_RS19480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS19480 PF03466 LysR substrate binding domain J4N38_RS19485 PF00593 TonB dependent receptor J4N38_RS19485 PF07715 TonB-dependent Receptor Plug Domain J4N38_RS19490 PF00672 HAMP domain J4N38_RS19490 PF12729 Four helix bundle sensory module for signal transduction J4N38_RS19490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS19495 PF00676 Dehydrogenase E1 component J4N38_RS19500 PF02780 Transketolase, C-terminal domain J4N38_RS19500 PF02779 Transketolase, pyrimidine binding domain J4N38_RS19505 PF02817 e3 binding domain J4N38_RS19505 PF00364 Biotin-requiring enzyme J4N38_RS19505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N38_RS19510 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS19515 PF00766 Electron transfer flavoprotein FAD-binding domain J4N38_RS19515 PF01012 Electron transfer flavoprotein domain J4N38_RS19520 PF01012 Electron transfer flavoprotein domain J4N38_RS19530 PF00127 Copper binding proteins, plastocyanin/azurin family J4N38_RS19540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N38_RS19540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_RS19545 PF00378 Enoyl-CoA hydratase/isomerase J4N38_RS19550 PF00378 Enoyl-CoA hydratase/isomerase J4N38_RS19555 PF02770 Acyl-CoA dehydrogenase, middle domain J4N38_RS19555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N38_RS19555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N38_RS19560 PF00171 Aldehyde dehydrogenase family J4N38_RS19565 PF02803 Thiolase, C-terminal domain J4N38_RS19565 PF00108 Thiolase, N-terminal domain J4N38_RS19570 PF00376 MerR family regulatory protein J4N38_RS19570 PF09278 MerR, DNA binding J4N38_RS19575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N38_RS19575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N38_RS19575 PF02770 Acyl-CoA dehydrogenase, middle domain J4N38_RS19580 PF01039 Carboxyl transferase domain J4N38_RS19585 PF00378 Enoyl-CoA hydratase/isomerase J4N38_RS19590 PF00682 HMGL-like J4N38_RS19610 PF01810 LysE type translocator J4N38_RS19615 PF07681 DoxX J4N38_RS19620 PF02678 Pirin J4N38_RS19620 PF17954 Quercetinase C-terminal cupin domain J4N38_RS19630 PF01235 Sodium:alanine symporter family J4N38_RS19635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS19635 PF03466 LysR substrate binding domain J4N38_RS19640 PF13460 NAD(P)H-binding J4N38_RS19650 PF18416 N-acetylglucosamine binding protein domain 2 J4N38_RS19650 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J4N38_RS19670 PF00529 HlyD membrane-fusion protein of T1SS J4N38_RS19675 PF00664 ABC transporter transmembrane region J4N38_RS19675 PF00005 ABC transporter J4N38_RS19680 PF00005 ABC transporter J4N38_RS19705 PF00871 Acetokinase family J4N38_RS19710 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS19710 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS19710 PF00563 EAL domain J4N38_RS19715 PF13411 MerR HTH family regulatory protein J4N38_RS19725 PF14579 Helix-hairpin-helix motif J4N38_RS19725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N38_RS19725 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N38_RS19725 PF02811 PHP domain J4N38_RS19725 PF00929 Exonuclease J4N38_RS19735 PF12793 Sugar transport-related sRNA regulator N-term J4N38_RS19735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS19745 PF03061 Thioesterase superfamily J4N38_RS19750 PF01435 Peptidase family M48 J4N38_RS19780 PF03741 Integral membrane protein TerC family J4N38_RS19785 PF00149 Calcineurin-like phosphoesterase J4N38_RS19785 PF02872 5'-nucleotidase, C-terminal domain J4N38_RS19790 PF11398 Protein of unknown function (DUF2813) J4N38_RS19795 PF06496 Protein of unknown function (DUF1097) J4N38_RS19800 PF03466 LysR substrate binding domain J4N38_RS19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS19805 PF01226 Formate/nitrite transporter J4N38_RS19810 PF04264 YceI-like domain J4N38_RS19815 PF01292 Prokaryotic cytochrome b561 J4N38_RS19835 PF03606 C4-dicarboxylate anaerobic carrier J4N38_RS19840 PF00072 Response regulator receiver domain J4N38_RS19840 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS19845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS19845 PF07730 Histidine kinase J4N38_RS19845 PF00672 HAMP domain J4N38_RS19845 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4N38_RS19850 PF12838 4Fe-4S dicluster domain J4N38_RS19850 PF13187 4Fe-4S dicluster domain J4N38_RS19860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N38_RS19860 PF00384 Molybdopterin oxidoreductase J4N38_RS19860 PF01568 Molydopterin dinucleotide binding domain J4N38_RS19865 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) J4N38_RS19870 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N38_RS19880 PF16363 GDP-mannose 4,6 dehydratase J4N38_RS19885 PF03746 LamB/YcsF family J4N38_RS19895 PF02626 Carboxyltransferase domain, subdomain A and B J4N38_RS19910 PF00005 ABC transporter J4N38_RS19915 PF13472 GDSL-like Lipase/Acylhydrolase family J4N38_RS19920 PF07055 Enoyl reductase FAD binding domain J4N38_RS19920 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4N38_RS19920 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4N38_RS19925 PF00563 EAL domain J4N38_RS19925 PF00498 FHA domain J4N38_RS19925 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS19935 PF00226 DnaJ domain J4N38_RS19935 PF01556 DnaJ C terminal domain J4N38_RS19935 PF00684 DnaJ central domain J4N38_RS19950 PF03091 CutA1 divalent ion tolerance protein J4N38_RS19955 PF00580 UvrD/REP helicase N-terminal domain J4N38_RS19955 PF13361 UvrD-like helicase C-terminal domain J4N38_RS19955 PF12462 DNA helicase IV / RNA helicase N terminal J4N38_RS19960 PF12805 FUSC-like inner membrane protein yccS J4N38_RS19980 PF01266 FAD dependent oxidoreductase J4N38_RS19980 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4N38_RS19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS19990 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS19990 PF09308 LuxQ, periplasmic J4N38_RS19990 PF00072 Response regulator receiver domain J4N38_RS19995 PF13407 Periplasmic binding protein domain J4N38_RS20005 PF01541 GIY-YIG catalytic domain J4N38_RS20010 PF04337 Protein of unknown function, DUF480 J4N38_RS20020 PF04363 Protein of unknown function (DUF496) J4N38_RS20030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4N38_RS20030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4N38_RS20035 PF00230 Major intrinsic protein J4N38_RS20040 PF01266 FAD dependent oxidoreductase J4N38_RS20040 PF04324 BFD-like [2Fe-2S] binding domain J4N38_RS20045 PF00890 FAD binding domain J4N38_RS20050 PF02754 Cysteine-rich domain J4N38_RS20050 PF13183 4Fe-4S dicluster domain J4N38_RS20070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N38_RS20070 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N38_RS20080 PF08443 RimK-like ATP-grasp domain J4N38_RS20080 PF18030 RimK PreATP-grasp domain J4N38_RS20085 PF00155 Aminotransferase class I and II J4N38_RS20095 PF03477 ATP cone domain J4N38_RS20095 PF13597 Anaerobic ribonucleoside-triphosphate reductase J4N38_RS20105 PF04143 Sulphur transport J4N38_RS20125 PF05547 Immune inhibitor A peptidase M6 J4N38_RS20125 PF00801 PKD domain J4N38_RS20130 PF00657 GDSL-like Lipase/Acylhydrolase J4N38_RS20135 PF07690 Major Facilitator Superfamily J4N38_RS20140 PF01177 Asp/Glu/Hydantoin racemase J4N38_RS20145 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J4N38_RS20145 PF00561 alpha/beta hydrolase fold J4N38_RS20155 PF02803 Thiolase, C-terminal domain J4N38_RS20155 PF00108 Thiolase, N-terminal domain J4N38_RS20160 PF00106 short chain dehydrogenase J4N38_RS20165 PF08361 MAATS-type transcriptional repressor, C-terminal region J4N38_RS20165 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS20175 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N38_RS20205 PF01037 Lrp/AsnC ligand binding domain J4N38_RS20215 PF05947 Type VI secretion system, TssF J4N38_RS20225 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N38_RS20240 PF03793 PASTA domain J4N38_RS20240 PF00069 Protein kinase domain J4N38_RS20265 PF04717 Type VI secretion system, phage-baseplate injector J4N38_RS20270 PF05638 Type VI secretion system effector, Hcp J4N38_RS20275 PF07724 AAA domain (Cdc48 subfamily) J4N38_RS20275 PF10431 C-terminal, D2-small domain, of ClpB protein J4N38_RS20275 PF00004 ATPase family associated with various cellular activities (AAA) J4N38_RS20275 PF17871 AAA lid domain J4N38_RS20280 PF00158 Sigma-54 interaction domain J4N38_RS20280 PF01590 GAF domain J4N38_RS20280 PF02954 Bacterial regulatory protein, Fis family J4N38_RS20285 PF00691 OmpA family J4N38_RS20285 PF05736 OprF membrane domain J4N38_RS20305 PF01551 Peptidase family M23 J4N38_RS20305 PF01476 LysM domain J4N38_RS20305 PF08525 Opacity-associated protein A N-terminal motif J4N38_RS20315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS20315 PF00672 HAMP domain J4N38_RS20315 PF17200 Single Cache domain 2 J4N38_RS20325 PF18081 Fanconi anemia-associated nuclease SAP domain J4N38_RS20325 PF08774 VRR-NUC domain J4N38_RS20340 PF01268 Formate--tetrahydrofolate ligase J4N38_RS20360 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS20360 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS20360 PF00563 EAL domain J4N38_RS20365 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS20365 PF00072 Response regulator receiver domain J4N38_RS20370 PF00005 ABC transporter J4N38_RS20370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS20375 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_RS20375 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS20380 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS20385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS20395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS20395 PF00672 HAMP domain J4N38_RS20395 PF17200 Single Cache domain 2 J4N38_RS20400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N38_RS20400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N38_RS20405 PF13654 AAA domain J4N38_RS20405 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N38_RS20415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS20415 PF00005 ABC transporter J4N38_RS20420 PF03466 LysR substrate binding domain J4N38_RS20420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS20425 PF02652 L-lactate permease J4N38_RS20430 PF01070 FMN-dependent dehydrogenase J4N38_RS20445 PF00005 ABC transporter J4N38_RS20445 PF00571 CBS domain J4N38_RS20450 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS20455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4N38_RS20460 PF05199 GMC oxidoreductase J4N38_RS20460 PF00732 GMC oxidoreductase J4N38_RS20465 PF00171 Aldehyde dehydrogenase family J4N38_RS20470 PF13977 BetI-type transcriptional repressor, C-terminal J4N38_RS20470 PF00440 Bacterial regulatory proteins, tetR family J4N38_RS20480 PF02627 Carboxymuconolactone decarboxylase family J4N38_RS20485 PF02525 Flavodoxin-like fold J4N38_RS20490 PF00155 Aminotransferase class I and II J4N38_RS20490 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS20500 PF12792 CSS motif domain associated with EAL J4N38_RS20500 PF00563 EAL domain J4N38_RS20505 PF12852 Cupin J4N38_RS20505 PF12833 Helix-turn-helix domain J4N38_RS20510 PF07690 Major Facilitator Superfamily J4N38_RS20515 PF03466 LysR substrate binding domain J4N38_RS20515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS20520 PF04794 YdjC-like protein J4N38_RS20525 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N38_RS20525 PF03476 MOSC N-terminal beta barrel domain J4N38_RS20525 PF03473 MOSC domain J4N38_RS20530 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS20530 PF01627 Hpt domain J4N38_RS20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS20530 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS20530 PF00072 Response regulator receiver domain J4N38_RS20530 PF00989 PAS fold J4N38_RS20540 PF00934 PE family J4N38_RS20540 PF07859 alpha/beta hydrolase fold J4N38_RS20545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS20545 PF03466 LysR substrate binding domain J4N38_RS20550 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II J4N38_RS20550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase J4N38_RS20550 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg J4N38_RS20555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_RS20560 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS20565 PF00144 Beta-lactamase J4N38_RS20580 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS20580 PF00072 Response regulator receiver domain J4N38_RS20595 PF00478 IMP dehydrogenase / GMP reductase domain J4N38_RS20600 PF01256 Carbohydrate kinase J4N38_RS20600 PF03853 YjeF-related protein N-terminus J4N38_RS20615 PF00072 Response regulator receiver domain J4N38_RS20620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N38_RS20620 PF00072 Response regulator receiver domain J4N38_RS20620 PF00672 HAMP domain J4N38_RS20620 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS20620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS20620 PF01627 Hpt domain J4N38_RS20630 PF13581 Histidine kinase-like ATPase domain J4N38_RS20640 PF08678 Rsbr N terminal J4N38_RS20640 PF01740 STAS domain J4N38_RS20645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS20645 PF08447 PAS fold J4N38_RS20665 PF00575 S1 RNA binding domain J4N38_RS20665 PF08206 Ribonuclease B OB domain J4N38_RS20665 PF00773 RNB domain J4N38_RS20670 PF03880 DbpA RNA binding domain J4N38_RS20670 PF00270 DEAD/DEAH box helicase J4N38_RS20670 PF00271 Helicase conserved C-terminal domain J4N38_RS20680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS20680 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS20680 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS20685 PF11849 Domain of unknown function (DUF3369) J4N38_RS20690 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS20695 PF00294 pfkB family carbohydrate kinase J4N38_RS20700 PF13407 Periplasmic binding protein domain J4N38_RS20705 PF02653 Branched-chain amino acid transport system / permease component J4N38_RS20710 PF00005 ABC transporter J4N38_RS20715 PF05025 RbsD / FucU transport protein family J4N38_RS20730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4N38_RS20730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4N38_RS20730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4N38_RS20735 PF00909 Ammonium Transporter Family J4N38_RS20760 PF00155 Aminotransferase class I and II J4N38_RS20760 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS20795 PF07504 Fungalysin/Thermolysin Propeptide Motif J4N38_RS20795 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_RS20795 PF02868 Thermolysin metallopeptidase, alpha-helical domain J4N38_RS20795 PF01447 Thermolysin metallopeptidase, catalytic domain J4N38_RS20795 PF03413 Peptidase propeptide and YPEB domain J4N38_RS20810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N38_RS20810 PF00356 Bacterial regulatory proteins, lacI family J4N38_RS20815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_RS20815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4N38_RS20820 PF01202 Shikimate kinase J4N38_RS20825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_RS20825 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N38_RS20835 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_RS20845 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS20845 PF00563 EAL domain J4N38_RS20845 PF03707 Bacterial signalling protein N terminal repeat J4N38_RS20860 PF03466 LysR substrate binding domain J4N38_RS20860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS20865 PF00563 EAL domain J4N38_RS20865 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS20875 PF06865 Pyrimidine/purine nucleoside phosphorylase J4N38_RS20885 PF00924 Mechanosensitive ion channel J4N38_RS20895 PF12706 Beta-lactamase superfamily domain J4N38_RS20905 PF02397 Bacterial sugar transferase J4N38_RS20915 PF02563 Polysaccharide biosynthesis/export protein J4N38_RS20915 PF10531 SLBB domain J4N38_RS20915 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J4N38_RS20920 PF13614 AAA domain J4N38_RS20920 PF13807 G-rich domain on putative tyrosine kinase J4N38_RS20920 PF02706 Chain length determinant protein J4N38_RS20945 PF00578 AhpC/TSA family J4N38_RS20950 PF11412 Disulphide bond corrector protein DsbC J4N38_RS20950 PF02683 Cytochrome C biogenesis protein transmembrane region J4N38_RS20960 PF00583 Acetyltransferase (GNAT) family J4N38_RS20965 PF01810 LysE type translocator J4N38_RS20985 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4N38_RS20995 PF00012 Hsp70 protein J4N38_RS21000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS21000 PF03466 LysR substrate binding domain J4N38_RS21010 PF13378 Enolase C-terminal domain-like J4N38_RS21010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4N38_RS21020 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS21020 PF00563 EAL domain J4N38_RS21025 PF13458 Periplasmic binding protein J4N38_RS21030 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS21030 PF17151 Periplasmic sensor domain J4N38_RS21040 PF04389 Peptidase family M28 J4N38_RS21040 PF02225 PA domain J4N38_RS21045 PF17999 Pullulanase N1-terminal domain J4N38_RS21045 PF00128 Alpha amylase, catalytic domain J4N38_RS21045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N38_RS21060 PF01810 LysE type translocator J4N38_RS21065 PF00072 Response regulator receiver domain J4N38_RS21065 PF04397 LytTr DNA-binding domain J4N38_RS21070 PF06580 Histidine kinase J4N38_RS21070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS21070 PF07694 5TMR of 5TMR-LYT J4N38_RS21085 PF02687 FtsX-like permease family J4N38_RS21085 PF12704 MacB-like periplasmic core domain J4N38_RS21090 PF00005 ABC transporter J4N38_RS21105 PF00171 Aldehyde dehydrogenase family J4N38_RS21115 PF03466 LysR substrate binding domain J4N38_RS21115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS21120 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS21120 PF17151 Periplasmic sensor domain J4N38_RS21125 PF02525 Flavodoxin-like fold J4N38_RS21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS21135 PF03466 LysR substrate binding domain J4N38_RS21145 PF12843 Putative quorum-sensing-regulated virulence factor J4N38_RS21160 PF07943 Penicillin-binding protein 5, C-terminal domain J4N38_RS21160 PF00768 D-alanyl-D-alanine carboxypeptidase J4N38_RS21175 PF03889 Alternative ribosome-rescue factor A J4N38_RS21180 PF00313 'Cold-shock' DNA-binding domain J4N38_RS21195 PF00175 Oxidoreductase NAD-binding domain J4N38_RS21195 PF00042 Globin J4N38_RS21195 PF00970 Oxidoreductase FAD-binding domain J4N38_RS21200 PF01590 GAF domain J4N38_RS21200 PF00158 Sigma-54 interaction domain J4N38_RS21215 PF02525 Flavodoxin-like fold J4N38_RS21220 PF02254 TrkA-N domain J4N38_RS21220 PF00999 Sodium/hydrogen exchanger family J4N38_RS21225 PF01554 MatE J4N38_RS21230 PF00892 EamA-like transporter family J4N38_RS21235 PF00462 Glutaredoxin J4N38_RS21250 PF03466 LysR substrate binding domain J4N38_RS21250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS21255 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS21255 PF00563 EAL domain J4N38_RS21255 PF08448 PAS fold J4N38_RS21255 PF08447 PAS fold J4N38_RS21270 PF02540 NAD synthase J4N38_RS21275 PF00196 Bacterial regulatory proteins, luxR family J4N38_RS21290 PF01571 Aminomethyltransferase folate-binding domain J4N38_RS21290 PF08669 Glycine cleavage T-protein C-terminal barrel domain J4N38_RS21300 PF00464 Serine hydroxymethyltransferase J4N38_RS21305 PF01597 Glycine cleavage H-protein J4N38_RS21310 PF02347 Glycine cleavage system P-protein J4N38_RS21340 PF00664 ABC transporter transmembrane region J4N38_RS21340 PF00005 ABC transporter J4N38_RS21345 PF00582 Universal stress protein family J4N38_RS21355 PF13244 Domain of unknown function (DUF4040) J4N38_RS21355 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J4N38_RS21355 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J4N38_RS21355 PF00361 Proton-conducting membrane transporter J4N38_RS21360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J4N38_RS21365 PF00361 Proton-conducting membrane transporter J4N38_RS21370 PF01899 Na+/H+ ion antiporter subunit J4N38_RS21375 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J4N38_RS21380 PF03334 Na+/H+ antiporter subunit J4N38_RS21405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4N38_RS21405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N38_RS21410 PF01810 LysE type translocator J4N38_RS21420 PF05995 Cysteine dioxygenase type I J4N38_RS21425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS21425 PF12729 Four helix bundle sensory module for signal transduction J4N38_RS21425 PF00672 HAMP domain J4N38_RS21430 PF00672 HAMP domain J4N38_RS21430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS21430 PF17200 Single Cache domain 2 J4N38_RS21440 PF02264 LamB porin J4N38_RS21445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N38_RS21445 PF00128 Alpha amylase, catalytic domain J4N38_RS21455 PF17945 Beta/Gamma crystallin J4N38_RS21455 PF12561 ToxR activated gene A lipoprotein domain J4N38_RS21470 PF03808 Glycosyl transferase WecB/TagA/CpsF family J4N38_RS21480 PF13579 Glycosyl transferase 4-like domain J4N38_RS21480 PF00534 Glycosyl transferases group 1 J4N38_RS21490 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS21505 PF13439 Glycosyltransferase Family 4 J4N38_RS21505 PF00534 Glycosyl transferases group 1 J4N38_RS21510 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4N38_RS21510 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4N38_RS21510 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4N38_RS21515 PF02350 UDP-N-acetylglucosamine 2-epimerase J4N38_RS21520 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4N38_RS21525 PF03605 Anaerobic c4-dicarboxylate membrane transporter J4N38_RS21545 PF00248 Aldo/keto reductase family J4N38_RS21555 PF00128 Alpha amylase, catalytic domain J4N38_RS21565 PF00793 DAHP synthetase I family J4N38_RS21570 PF00005 ABC transporter J4N38_RS21575 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS21580 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS21585 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS21590 PF01040 UbiA prenyltransferase family J4N38_RS21595 PF02628 Cytochrome oxidase assembly protein J4N38_RS21615 PF00510 Cytochrome c oxidase subunit III J4N38_RS21620 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J4N38_RS21625 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N38_RS21630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4N38_RS21630 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4N38_RS21635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N38_RS21635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N38_RS21635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N38_RS21635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N38_RS21640 PF00892 EamA-like transporter family J4N38_RS21650 PF03618 Kinase/pyrophosphorylase J4N38_RS21655 PF00391 PEP-utilising enzyme, mobile domain J4N38_RS21655 PF02896 PEP-utilising enzyme, TIM barrel domain J4N38_RS21655 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4N38_RS21660 PF07670 Nucleoside recognition J4N38_RS21670 PF00175 Oxidoreductase NAD-binding domain J4N38_RS21670 PF00970 Oxidoreductase FAD-binding domain J4N38_RS21695 PF00873 AcrB/AcrD/AcrF family J4N38_RS21710 PF02678 Pirin J4N38_RS21710 PF05726 Pirin C-terminal cupin domain J4N38_RS21715 PF00561 alpha/beta hydrolase fold J4N38_RS21755 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS21755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS21755 PF00672 HAMP domain J4N38_RS21760 PF00072 Response regulator receiver domain J4N38_RS21760 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS21765 PF00472 RF-1 domain J4N38_RS21785 PF01979 Amidohydrolase family J4N38_RS21790 PF00132 Bacterial transferase hexapeptide (six repeats) J4N38_RS21795 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4N38_RS21795 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4N38_RS21800 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N38_RS21810 PF00701 Dihydrodipicolinate synthetase family J4N38_RS21815 PF02423 Ornithine cyclodeaminase/mu-crystallin family J4N38_RS21820 PF01266 FAD dependent oxidoreductase J4N38_RS21825 PF05544 Proline racemase J4N38_RS21830 PF00171 Aldehyde dehydrogenase family J4N38_RS21835 PF00392 Bacterial regulatory proteins, gntR family J4N38_RS21835 PF07729 FCD domain J4N38_RS21845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N38_RS21850 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS21855 PF00528 Binding-protein-dependent transport system inner membrane component J4N38_RS21855 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N38_RS21860 PF00005 ABC transporter J4N38_RS21860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS21865 PF00005 ABC transporter J4N38_RS21865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N38_RS21870 PF00557 Metallopeptidase family M24 J4N38_RS21870 PF05195 Aminopeptidase P, N-terminal domain J4N38_RS21890 PF01752 Collagenase J4N38_RS21890 PF08453 Peptidase family M9 N-terminal J4N38_RS21890 PF04151 Bacterial pre-peptidase C-terminal domain J4N38_RS21900 PF03372 Endonuclease/Exonuclease/phosphatase family J4N38_RS21910 PF01752 Collagenase J4N38_RS21910 PF08453 Peptidase family M9 N-terminal J4N38_RS21915 PF00270 DEAD/DEAH box helicase J4N38_RS21915 PF00271 Helicase conserved C-terminal domain J4N38_RS21925 PF03734 L,D-transpeptidase catalytic domain J4N38_RS21925 PF01476 LysM domain J4N38_RS21925 PF17969 L,D-transpeptidase C-terminal domain J4N38_RS21930 PF00875 DNA photolyase J4N38_RS21930 PF03441 FAD binding domain of DNA photolyase J4N38_RS21935 PF13411 MerR HTH family regulatory protein J4N38_RS21940 PF08349 Protein of unknown function (DUF1722) J4N38_RS21945 PF01048 Phosphorylase superfamily J4N38_RS21960 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS21970 PF11742 Protein of unknown function (DUF3302) J4N38_RS21975 PF00529 HlyD membrane-fusion protein of T1SS J4N38_RS21975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N38_RS21980 PF03616 Sodium/glutamate symporter J4N38_RS21995 PF00664 ABC transporter transmembrane region J4N38_RS21995 PF00005 ABC transporter J4N38_RS22005 PF01037 Lrp/AsnC ligand binding domain J4N38_RS22015 PF01609 Transposase DDE domain J4N38_RS22015 PF13006 Insertion element 4 transposase N-terminal J4N38_RS22020 PF00474 Sodium:solute symporter family J4N38_RS22030 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J4N38_RS22030 PF00171 Aldehyde dehydrogenase family J4N38_RS22030 PF01619 Proline dehydrogenase J4N38_RS22030 PF14850 DNA-binding domain of Proline dehydrogenase J4N38_RS22035 PF12833 Helix-turn-helix domain J4N38_RS22045 PF03781 Sulfatase-modifying factor enzyme 1 J4N38_RS22055 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4N38_RS22055 PF01243 Pyridoxamine 5'-phosphate oxidase J4N38_RS22060 PF00529 HlyD membrane-fusion protein of T1SS J4N38_RS22075 PF00664 ABC transporter transmembrane region J4N38_RS22075 PF03412 Peptidase C39 family J4N38_RS22075 PF00005 ABC transporter J4N38_RS22080 PF08329 Chitinase A, N-terminal domain J4N38_RS22080 PF00704 Glycosyl hydrolases family 18 J4N38_RS22085 PF01212 Beta-eliminating lyase J4N38_RS22090 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N38_RS22095 PF01966 HD domain J4N38_RS22100 PF13302 Acetyltransferase (GNAT) domain J4N38_RS22110 PF02630 SCO1/SenC J4N38_RS22120 PF03466 LysR substrate binding domain J4N38_RS22120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS22125 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4N38_RS22130 PF01906 Putative heavy-metal-binding J4N38_RS22135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS22135 PF03466 LysR substrate binding domain J4N38_RS22140 PF07690 Major Facilitator Superfamily J4N38_RS22145 PF08220 DeoR-like helix-turn-helix domain J4N38_RS22145 PF00455 DeoR C terminal sensor domain J4N38_RS22150 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N38_RS22155 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N38_RS22165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N38_RS22190 PF03306 Alpha-acetolactate decarboxylase J4N38_RS22195 PF07690 Major Facilitator Superfamily J4N38_RS22200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_RS22200 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_RS22200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_RS22355 PF13185 GAF domain J4N38_RS22355 PF00158 Sigma-54 interaction domain J4N38_RS22355 PF02954 Bacterial regulatory protein, Fis family J4N38_RS22360 PF00375 Sodium:dicarboxylate symporter family J4N38_RS22365 PF00672 HAMP domain J4N38_RS22365 PF02743 Cache domain J4N38_RS22365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS22375 PF04115 Ureidoglycolate lyase J4N38_RS22380 PF03561 Allantoicase repeat J4N38_RS22385 PF09349 OHCU decarboxylase J4N38_RS22385 PF01014 Uricase J4N38_RS22395 PF00576 HIUase/Transthyretin family J4N38_RS22400 PF00860 Permease family J4N38_RS22405 PF00860 Permease family J4N38_RS22410 PF01979 Amidohydrolase family J4N38_RS22415 PF06224 Winged helix DNA-binding domain J4N38_RS22420 PF03928 Haem-degrading J4N38_RS22425 PF00072 Response regulator receiver domain J4N38_RS22425 PF00486 Transcriptional regulatory protein, C terminal J4N38_RS22430 PF00512 His Kinase A (phospho-acceptor) domain J4N38_RS22430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N38_RS22430 PF07689 KaiB domain J4N38_RS22435 PF00753 Metallo-beta-lactamase superfamily J4N38_RS22480 PF01040 UbiA prenyltransferase family J4N38_RS22490 PF00510 Cytochrome c oxidase subunit III J4N38_RS22495 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N38_RS22500 PF06481 COX Aromatic Rich Motif J4N38_RS22500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4N38_RS22505 PF10282 Lactonase, 7-bladed beta-propeller J4N38_RS22525 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N38_RS22530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N38_RS22530 PF00672 HAMP domain J4N38_RS22530 PF02743 Cache domain J4N38_RS22535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N38_RS22540 PF00118 TCP-1/cpn60 chaperonin family J4N38_RS22545 PF00166 Chaperonin 10 Kd subunit J4N38_RS22550 PF00011 Hsp20/alpha crystallin family J4N38_RS22555 PF01594 AI-2E family transporter J4N38_RS22590 PF00924 Mechanosensitive ion channel J4N38_RS22595 PF00781 Diacylglycerol kinase catalytic domain J4N38_RS22595 PF02142 MGS-like domain J4N38_RS22620 PF01590 GAF domain J4N38_RS22620 PF02954 Bacterial regulatory protein, Fis family J4N38_RS22620 PF00158 Sigma-54 interaction domain J4N38_RS22625 PF08448 PAS fold J4N38_RS22625 PF00990 Diguanylate cyclase, GGDEF domain J4N38_RS22625 PF00563 EAL domain J4N38_RS22630 PF13581 Histidine kinase-like ATPase domain J4N38_RS22645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N38_RS22645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N38_RS22650 PF01261 Xylose isomerase-like TIM barrel J4N38_RS22655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N38_RS22655 PF00205 Thiamine pyrophosphate enzyme, central domain J4N38_RS22655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N38_RS22660 PF01274 Malate synthase J4N38_RS22670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N38_RS22670 PF03466 LysR substrate binding domain J4N38_RS22675 PF03606 C4-dicarboxylate anaerobic carrier J4N38_RS22680 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J4N38_RS22680 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J4N38_RS22685 PF01047 MarR family J4N38_RS22690 PF00892 EamA-like transporter family J4N38_RS22710 PF03610 PTS system fructose IIA component J4N38_RS22710 PF03830 PTS system sorbose subfamily IIB component J4N38_RS22715 PF01709 Transcriptional regulator