locus-tag class description J4N44_RS00005 PF00308 Bacterial dnaA protein J4N44_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix J4N44_RS00005 PF11638 DnaA N-terminal domain J4N44_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain J4N44_RS00010 PF02767 DNA polymerase III beta subunit, central domain J4N44_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain J4N44_RS00015 PF02463 RecF/RecN/SMC N terminal domain J4N44_RS00020 PF00204 DNA gyrase B J4N44_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus J4N44_RS00020 PF18053 DNA gyrase B subunit insert domain J4N44_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS00020 PF01751 Toprim domain J4N44_RS00025 PF00011 Hsp20/alpha crystallin family J4N44_RS00030 PF00155 Aminotransferase class I and II J4N44_RS00035 PF00128 Alpha amylase, catalytic domain J4N44_RS00040 PF05746 DALR anticodon binding domain J4N44_RS00040 PF02092 Glycyl-tRNA synthetase beta subunit J4N44_RS00045 PF02091 Glycyl-tRNA synthetase alpha subunit J4N44_RS00050 PF01169 Uncharacterized protein family UPF0016 J4N44_RS00060 PF01206 Sulfurtransferase TusA J4N44_RS00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS00070 PF03466 LysR substrate binding domain J4N44_RS00075 PF08240 Alcohol dehydrogenase GroES-like domain J4N44_RS00075 PF00107 Zinc-binding dehydrogenase J4N44_RS00080 PF02803 Thiolase, C-terminal domain J4N44_RS00080 PF00108 Thiolase, N-terminal domain J4N44_RS00085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4N44_RS00085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4N44_RS00085 PF00378 Enoyl-CoA hydratase/isomerase J4N44_RS00090 PF01205 Uncharacterized protein family UPF0029 J4N44_RS00090 PF09186 Domain of unknown function (DUF1949) J4N44_RS00095 PF02386 Cation transport protein J4N44_RS00100 PF12724 Flavodoxin domain J4N44_RS00145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS00145 PF03466 LysR substrate binding domain J4N44_RS00150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J4N44_RS00150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J4N44_RS00155 PF04380 Membrane fusogenic activity J4N44_RS00160 PF00873 AcrB/AcrD/AcrF family J4N44_RS00165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS00170 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS00170 PF08359 YsiA-like protein, C-terminal region J4N44_RS00175 PF13361 UvrD-like helicase C-terminal domain J4N44_RS00175 PF00580 UvrD/REP helicase N-terminal domain J4N44_RS00180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N44_RS00210 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS00215 PF00005 ABC transporter J4N44_RS00215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS00220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS00225 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS00230 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N44_RS00230 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS00260 PF00069 Protein kinase domain J4N44_RS00265 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS00265 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N44_RS00270 PF03466 LysR substrate binding domain J4N44_RS00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS00275 PF00893 Small Multidrug Resistance protein J4N44_RS00280 PF00893 Small Multidrug Resistance protein J4N44_RS00285 PF00920 Dehydratase family J4N44_RS00290 PF01202 Shikimate kinase J4N44_RS00295 PF02447 GntP family permease J4N44_RS00300 PF01081 KDPG and KHG aldolase J4N44_RS00305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N44_RS00305 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS00315 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J4N44_RS00320 PF01432 Peptidase family M3 J4N44_RS00325 PF01037 Lrp/AsnC ligand binding domain J4N44_RS00330 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS00330 PF00563 EAL domain J4N44_RS00330 PF08448 PAS fold J4N44_RS00335 PF04445 Putative SAM-dependent methyltransferase J4N44_RS00345 PF00892 EamA-like transporter family J4N44_RS00350 PF00582 Universal stress protein family J4N44_RS00355 PF00210 Ferritin-like domain J4N44_RS00360 PF10625 Universal stress protein B (UspB) J4N44_RS00380 PF00563 EAL domain J4N44_RS00380 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS00380 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS00390 PF02646 RmuC family J4N44_RS00395 PF01209 ubiE/COQ5 methyltransferase family J4N44_RS00400 PF02036 SCP-2 sterol transfer family J4N44_RS00405 PF03109 ABC1 family J4N44_RS00410 PF02416 mttA/Hcf106 family J4N44_RS00415 PF02416 mttA/Hcf106 family J4N44_RS00420 PF00902 Sec-independent protein translocase protein (TatC) J4N44_RS00425 PF01026 TatD related DNase J4N44_RS00430 PF00490 Delta-aminolevulinic acid dehydratase J4N44_RS00440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4N44_RS00440 PF01612 3'-5' exonuclease J4N44_RS00440 PF01367 5'-3' exonuclease, C-terminal SAM fold J4N44_RS00440 PF00476 DNA polymerase family A J4N44_RS00445 PF01926 50S ribosome-binding GTPase J4N44_RS00450 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N44_RS00460 PF04220 Der GTPase activator (YihI) J4N44_RS00470 PF06969 HemN C-terminal domain J4N44_RS00470 PF04055 Radical SAM superfamily J4N44_RS00475 PF00962 Adenosine/AMP deaminase J4N44_RS00480 PF00563 EAL domain J4N44_RS00480 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS00480 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS00485 PF02954 Bacterial regulatory protein, Fis family J4N44_RS00485 PF00158 Sigma-54 interaction domain J4N44_RS00485 PF00072 Response regulator receiver domain J4N44_RS00490 PF00989 PAS fold J4N44_RS00490 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS00490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS00500 PF03951 Glutamine synthetase, beta-Grasp domain J4N44_RS00500 PF00120 Glutamine synthetase, catalytic domain J4N44_RS00505 PF03144 Elongation factor Tu domain 2 J4N44_RS00505 PF00009 Elongation factor Tu GTP binding domain J4N44_RS00505 PF00679 Elongation factor G C-terminus J4N44_RS00520 PF03631 Virulence factor BrkB J4N44_RS00525 PF02580 D-Tyr-tRNA(Tyr) deacylase J4N44_RS00530 PF00583 Acetyltransferase (GNAT) family J4N44_RS00530 PF09500 Putative thioesterase (yiiD_Cterm) J4N44_RS00540 PF01293 Phosphoenolpyruvate carboxykinase J4N44_RS00545 PF01430 Hsp33 protein J4N44_RS00550 PF01479 S4 domain J4N44_RS00555 PF11356 Type II secretion system protein C J4N44_RS00560 PF00263 Bacterial type II and III secretion system protein J4N44_RS00560 PF03958 Bacterial type II/III secretion system short domain J4N44_RS00565 PF00437 Type II/IV secretion system protein J4N44_RS00570 PF00482 Type II secretion system (T2SS), protein F J4N44_RS00575 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS00575 PF08334 Type II secretion system (T2SS), protein G J4N44_RS00580 PF12019 Type II transport protein GspH J4N44_RS00585 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS00585 PF02501 Type II secretion system (T2SS), protein I J4N44_RS00590 PF11612 Type II secretion system (T2SS), protein J J4N44_RS00590 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS00595 PF03934 Type II secretion system (T2SS), protein K J4N44_RS00600 PF12693 GspL periplasmic domain J4N44_RS00600 PF05134 Type II secretion system (T2SS), protein L J4N44_RS00605 PF04612 Type II secretion system (T2SS), protein M J4N44_RS00610 PF01203 Type II secretion system (T2SS), protein N J4N44_RS00615 PF00459 Inositol monophosphatase family J4N44_RS00620 PF00293 NUDIX domain J4N44_RS00625 PF01521 Iron-sulphur cluster biosynthesis J4N44_RS00625 PF01106 NifU-like domain J4N44_RS00630 PF00156 Phosphoribosyl transferase domain J4N44_RS00635 PF00561 alpha/beta hydrolase fold J4N44_RS00645 PF09371 Tex-like protein N-terminal domain J4N44_RS00645 PF17674 HHH domain J4N44_RS00645 PF00575 S1 RNA binding domain J4N44_RS00645 PF16921 Tex protein YqgF-like domain J4N44_RS00655 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N44_RS00655 PF03449 Transcription elongation factor, N-terminal J4N44_RS00660 PF00072 Response regulator receiver domain J4N44_RS00660 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS00665 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS00665 PF00672 HAMP domain J4N44_RS00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS00670 PF00860 Permease family J4N44_RS00675 PF00326 Prolyl oligopeptidase family J4N44_RS00680 PF00271 Helicase conserved C-terminal domain J4N44_RS00680 PF00270 DEAD/DEAH box helicase J4N44_RS00680 PF17191 RecG wedge domain J4N44_RS00685 PF00588 SpoU rRNA Methylase family J4N44_RS00685 PF12105 SpoU, rRNA methylase, C-terminal J4N44_RS00690 PF13291 ACT domain J4N44_RS00690 PF04607 Region found in RelA / SpoT proteins J4N44_RS00690 PF02824 TGS domain J4N44_RS00695 PF01192 RNA polymerase Rpb6 J4N44_RS00700 PF00625 Guanylate kinase J4N44_RS00715 PF02472 Biopolymer transport protein ExbD/TolR J4N44_RS00720 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS00735 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS00735 PF00593 TonB dependent receptor J4N44_RS00740 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS00745 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS00745 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N44_RS00750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS00755 PF00005 ABC transporter J4N44_RS00755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS00760 PF00005 ABC transporter J4N44_RS00760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS00775 PF00892 EamA-like transporter family J4N44_RS00785 PF00072 Response regulator receiver domain J4N44_RS00785 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS00790 PF08340 Domain of unknown function (DUF1732) J4N44_RS00790 PF03755 YicC-like family, N-terminal region J4N44_RS00795 PF03725 3' exoribonuclease family, domain 2 J4N44_RS00795 PF01138 3' exoribonuclease family, domain 1 J4N44_RS00800 PF00156 Phosphoribosyl transferase domain J4N44_RS00805 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N44_RS00810 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS00815 PF04127 DNA / pantothenate metabolism flavoprotein J4N44_RS00815 PF02441 Flavoprotein J4N44_RS00820 PF00672 HAMP domain J4N44_RS00820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS00820 PF02743 Cache domain J4N44_RS00825 PF04002 RadC-like JAB domain J4N44_RS00830 PF00830 Ribosomal L28 family J4N44_RS00835 PF00471 Ribosomal protein L33 J4N44_RS00840 PF00884 Sulfatase J4N44_RS00850 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J4N44_RS00850 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J4N44_RS00850 PF06827 Zinc finger found in FPG and IleRS J4N44_RS00855 PF01467 Cytidylyltransferase-like J4N44_RS00860 PF05686 Glycosyl transferase family 90 J4N44_RS00865 PF00535 Glycosyl transferase family 2 J4N44_RS00870 PF00535 Glycosyl transferase family 2 J4N44_RS00875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N44_RS00880 PF01219 Prokaryotic diacylglycerol kinase J4N44_RS00890 PF16363 GDP-mannose 4,6 dehydratase J4N44_RS00895 PF00483 Nucleotidyl transferase J4N44_RS00905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N44_RS00905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N44_RS00930 PF00501 AMP-binding enzyme J4N44_RS00930 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS00935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N44_RS00945 PF02719 Polysaccharide biosynthesis protein J4N44_RS00950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J4N44_RS00955 PF02350 UDP-N-acetylglucosamine 2-epimerase J4N44_RS00960 PF03102 NeuB family J4N44_RS00960 PF08666 SAF domain J4N44_RS00970 PF00483 Nucleotidyl transferase J4N44_RS00975 PF13472 GDSL-like Lipase/Acylhydrolase family J4N44_RS00975 PF02348 Cytidylyltransferase J4N44_RS00985 PF00202 Aminotransferase class-III J4N44_RS00990 PF00795 Carbon-nitrogen hydrolase J4N44_RS01010 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J4N44_RS01015 PF01075 Glycosyltransferase family 9 (heptosyltransferase) J4N44_RS01020 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N44_RS01025 PF01370 NAD dependent epimerase/dehydratase family J4N44_RS01030 PF06082 Exopolysaccharide biosynthesis protein YbjH J4N44_RS01090 PF00535 Glycosyl transferase family 2 J4N44_RS01100 PF13439 Glycosyltransferase Family 4 J4N44_RS01100 PF00534 Glycosyl transferases group 1 J4N44_RS01105 PF13439 Glycosyltransferase Family 4 J4N44_RS01105 PF00534 Glycosyl transferases group 1 J4N44_RS01110 PF16363 GDP-mannose 4,6 dehydratase J4N44_RS01115 PF01370 NAD dependent epimerase/dehydratase family J4N44_RS01120 PF00293 NUDIX domain J4N44_RS01125 PF01050 Mannose-6-phosphate isomerase J4N44_RS01125 PF00483 Nucleotidyl transferase J4N44_RS01130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N44_RS01130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N44_RS01130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N44_RS01130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N44_RS01135 PF01238 Phosphomannose isomerase type I J4N44_RS01140 PF00535 Glycosyl transferase family 2 J4N44_RS01145 PF01370 NAD dependent epimerase/dehydratase family J4N44_RS01150 PF02397 Bacterial sugar transferase J4N44_RS01155 PF02719 Polysaccharide biosynthesis protein J4N44_RS01160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J4N44_RS01160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J4N44_RS01160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J4N44_RS01165 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J4N44_RS01165 PF00753 Metallo-beta-lactamase superfamily J4N44_RS01165 PF10996 Beta-Casp domain J4N44_RS01170 PF00121 Triosephosphate isomerase J4N44_RS01195 PF08220 DeoR-like helix-turn-helix domain J4N44_RS01195 PF00455 DeoR C terminal sensor domain J4N44_RS01200 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded J4N44_RS01205 PF06005 Cell division protein ZapB J4N44_RS01210 PF03737 Aldolase/RraA J4N44_RS01215 PF01040 UbiA prenyltransferase family J4N44_RS01220 PF07724 AAA domain (Cdc48 subfamily) J4N44_RS01220 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS01225 PF00227 Proteasome subunit J4N44_RS01235 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS01240 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J4N44_RS01240 PF18074 Primosomal protein N C-terminal domain J4N44_RS01240 PF17764 3′ DNA-binding domain (3′BD) J4N44_RS01240 PF00271 Helicase conserved C-terminal domain J4N44_RS01240 PF00270 DEAD/DEAH box helicase J4N44_RS01245 PF01197 Ribosomal protein L31 J4N44_RS01250 PF00338 Ribosomal protein S10p/S20e J4N44_RS01255 PF00297 Ribosomal protein L3 J4N44_RS01260 PF00573 Ribosomal protein L4/L1 family J4N44_RS01265 PF00276 Ribosomal protein L23 J4N44_RS01270 PF00181 Ribosomal Proteins L2, RNA binding domain J4N44_RS01270 PF03947 Ribosomal Proteins L2, C-terminal domain J4N44_RS01275 PF00203 Ribosomal protein S19 J4N44_RS01280 PF00237 Ribosomal protein L22p/L17e J4N44_RS01285 PF00189 Ribosomal protein S3, C-terminal domain J4N44_RS01285 PF07650 KH domain J4N44_RS01290 PF00252 Ribosomal protein L16p/L10e J4N44_RS01295 PF00831 Ribosomal L29 protein J4N44_RS01300 PF00366 Ribosomal protein S17 J4N44_RS01305 PF00238 Ribosomal protein L14p/L23e J4N44_RS01310 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J4N44_RS01310 PF00467 KOW motif J4N44_RS01315 PF00281 Ribosomal protein L5 J4N44_RS01315 PF00673 ribosomal L5P family C-terminus J4N44_RS01320 PF00253 Ribosomal protein S14p/S29e J4N44_RS01325 PF00410 Ribosomal protein S8 J4N44_RS01330 PF00347 Ribosomal protein L6 J4N44_RS01335 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J4N44_RS01340 PF00333 Ribosomal protein S5, N-terminal domain J4N44_RS01340 PF03719 Ribosomal protein S5, C-terminal domain J4N44_RS01345 PF00327 Ribosomal protein L30p/L7e J4N44_RS01350 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J4N44_RS01355 PF00344 SecY translocase J4N44_RS01360 PF00444 Ribosomal protein L36 J4N44_RS01365 PF00416 Ribosomal protein S13/S18 J4N44_RS01370 PF00411 Ribosomal protein S11 J4N44_RS01375 PF00163 Ribosomal protein S4/S9 N-terminal domain J4N44_RS01375 PF01479 S4 domain J4N44_RS01380 PF01000 RNA polymerase Rpb3/RpoA insert domain J4N44_RS01380 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J4N44_RS01380 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J4N44_RS01385 PF01196 Ribosomal protein L17 J4N44_RS01395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N44_RS01395 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N44_RS01410 PF13673 Acetyltransferase (GNAT) domain J4N44_RS01415 PF03880 DbpA RNA binding domain J4N44_RS01415 PF00270 DEAD/DEAH box helicase J4N44_RS01415 PF00271 Helicase conserved C-terminal domain J4N44_RS01425 PF02872 5'-nucleotidase, C-terminal domain J4N44_RS01425 PF00149 Calcineurin-like phosphoesterase J4N44_RS01430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N44_RS01430 PF14824 Sirohaem biosynthesis protein central J4N44_RS01430 PF10414 Sirohaem synthase dimerisation region J4N44_RS01435 PF01507 Phosphoadenosine phosphosulfate reductase family J4N44_RS01440 PF00009 Elongation factor Tu GTP binding domain J4N44_RS01445 PF02080 TrkA-C domain J4N44_RS01445 PF03600 Citrate transporter J4N44_RS01470 PF00005 ABC transporter J4N44_RS01480 PF10795 Protein of unknown function (DUF2607) J4N44_RS01485 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) J4N44_RS01495 PF01625 Peptide methionine sulfoxide reductase J4N44_RS01500 PF07244 Surface antigen variable number repeat J4N44_RS01500 PF17243 POTRA domain TamA domain 1 J4N44_RS01500 PF01103 Surface antigen J4N44_RS01505 PF04357 TamB, inner membrane protein subunit of TAM complex J4N44_RS01510 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like J4N44_RS01520 PF00719 Inorganic pyrophosphatase J4N44_RS01525 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain J4N44_RS01530 PF01225 Mur ligase family, catalytic domain J4N44_RS01530 PF02875 Mur ligase family, glutamate ligase domain J4N44_RS01530 PF08245 Mur ligase middle domain J4N44_RS01535 PF02441 Flavoprotein J4N44_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS01550 PF00005 ABC transporter J4N44_RS01570 PF01316 Arginine repressor, DNA binding domain J4N44_RS01570 PF02863 Arginine repressor, C-terminal domain J4N44_RS01575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4N44_RS01575 PF00056 lactate/malate dehydrogenase, NAD binding domain J4N44_RS01585 PF00348 Polyprenyl synthetase J4N44_RS01590 PF00829 Ribosomal prokaryotic L21 protein J4N44_RS01595 PF01016 Ribosomal L27 protein J4N44_RS01600 PF01018 GTP1/OBG J4N44_RS01600 PF01926 50S ribosome-binding GTPase J4N44_RS01605 PF06738 Putative threonine/serine exporter J4N44_RS01610 PF12821 Threonine/Serine exporter, ThrE J4N44_RS01615 PF00186 Dihydrofolate reductase J4N44_RS01620 PF00149 Calcineurin-like phosphoesterase J4N44_RS01625 PF04379 ApaG domain J4N44_RS01630 PF00398 Ribosomal RNA adenine dimethylase J4N44_RS01635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J4N44_RS01640 PF09312 SurA N-terminal domain J4N44_RS01645 PF04453 LPS transport system D J4N44_RS01645 PF03968 OstA-like protein J4N44_RS01650 PF05099 Tellurite resistance protein TerB J4N44_RS01650 PF00226 DnaJ domain J4N44_RS01660 PF00694 Aconitase C-terminal domain J4N44_RS01665 PF00330 Aconitase family (aconitate hydratase) J4N44_RS01670 PF00180 Isocitrate/isopropylmalate dehydrogenase J4N44_RS01675 PF00682 HMGL-like J4N44_RS01675 PF08502 LeuA allosteric (dimerisation) domain J4N44_RS01685 PF01569 PAP2 superfamily J4N44_RS01695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS01695 PF03466 LysR substrate binding domain J4N44_RS01700 PF00501 AMP-binding enzyme J4N44_RS01705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N44_RS01705 PF00205 Thiamine pyrophosphate enzyme, central domain J4N44_RS01705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N44_RS01710 PF10369 Small subunit of acetolactate synthase J4N44_RS01715 PF17158 Membrane-associated sensor, integral membrane domain J4N44_RS01715 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS01725 PF00224 Pyruvate kinase, barrel domain J4N44_RS01725 PF02887 Pyruvate kinase, alpha/beta domain J4N44_RS01730 PF00455 DeoR C terminal sensor domain J4N44_RS01730 PF08220 DeoR-like helix-turn-helix domain J4N44_RS01735 PF01380 SIS domain J4N44_RS01750 PF00072 Response regulator receiver domain J4N44_RS01750 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS01755 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS01755 PF00672 HAMP domain J4N44_RS01755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS01760 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS01765 PF05068 Mannitol repressor J4N44_RS01770 PF01232 Mannitol dehydrogenase Rossmann domain J4N44_RS01770 PF08125 Mannitol dehydrogenase C-terminal domain J4N44_RS01775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS01775 PF02378 Phosphotransferase system, EIIC J4N44_RS01775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS01860 PF02899 Phage integrase, N-terminal SAM-like domain J4N44_RS01860 PF00589 Phage integrase family J4N44_RS01880 PF04545 Sigma-70, region 4 J4N44_RS01880 PF04542 Sigma-70 region 2 J4N44_RS01880 PF00140 Sigma-70 factor, region 1.2 J4N44_RS01880 PF04539 Sigma-70 region 3 J4N44_RS01880 PF04546 Sigma-70, non-essential region J4N44_RS01880 PF03979 Sigma-70 factor, region 1.1 J4N44_RS01885 PF10410 DnaB-helicase binding domain of primase J4N44_RS01885 PF08278 DNA primase DnaG DnaB-binding J4N44_RS01885 PF08275 DNA primase catalytic core, N-terminal domain J4N44_RS01885 PF01807 CHC2 zinc finger J4N44_RS01890 PF09424 Yqey-like protein J4N44_RS01895 PF01165 Ribosomal protein S21 J4N44_RS01900 PF00814 Glycoprotease family J4N44_RS01905 PF00561 alpha/beta hydrolase fold J4N44_RS01910 PF02660 Glycerol-3-phosphate acyltransferase J4N44_RS01915 PF02152 Dihydroneopterin aldolase J4N44_RS01920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4N44_RS01925 PF02673 Bacitracin resistance protein BacA J4N44_RS01930 PF01966 HD domain J4N44_RS01930 PF01743 Poly A polymerase head domain J4N44_RS01930 PF12627 Probable RNA and SrmB- binding site of polymerase A J4N44_RS01935 PF13401 AAA domain J4N44_RS01935 PF01471 Putative peptidoglycan binding domain J4N44_RS01945 PF08239 Bacterial SH3 domain J4N44_RS01950 PF01384 Phosphate transporter family J4N44_RS01955 PF01865 Protein of unknown function DUF47 J4N44_RS01960 PF01928 CYTH domain J4N44_RS01965 PF07885 Ion channel J4N44_RS01970 PF00672 HAMP domain J4N44_RS01970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS01970 PF02743 Cache domain J4N44_RS01975 PF08335 GlnD PII-uridylyltransferase J4N44_RS01975 PF03710 Glutamate-ammonia ligase adenylyltransferase J4N44_RS01980 PF00294 pfkB family carbohydrate kinase J4N44_RS01980 PF01467 Cytidylyltransferase-like J4N44_RS01985 PF02321 Outer membrane efflux protein J4N44_RS01990 PF00293 NUDIX domain J4N44_RS01995 PF06853 Protein of unknown function (DUF1249) J4N44_RS02000 PF00149 Calcineurin-like phosphoesterase J4N44_RS02005 PF05728 Uncharacterised protein family (UPF0227) J4N44_RS02010 PF01751 Toprim domain J4N44_RS02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS02010 PF00986 DNA gyrase B subunit, carboxyl terminus J4N44_RS02010 PF00204 DNA gyrase B J4N44_RS02015 PF03989 DNA gyrase C-terminal domain, beta-propeller J4N44_RS02015 PF00521 DNA gyrase/topoisomerase IV, subunit A J4N44_RS02020 PF13180 PDZ domain J4N44_RS02025 PF00595 PDZ domain J4N44_RS02030 PF06295 Protein of unknown function (DUF1043) J4N44_RS02035 PF03969 AFG1-like ATPase J4N44_RS02040 PF00572 Ribosomal protein L13 J4N44_RS02045 PF00380 Ribosomal protein S9/S16 J4N44_RS02050 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J4N44_RS02050 PF00355 Rieske [2Fe-2S] domain J4N44_RS02055 PF00033 Cytochrome b/b6/petB J4N44_RS02055 PF00032 Cytochrome b(C-terminal)/b6/petD J4N44_RS02060 PF02167 Cytochrome C1 family J4N44_RS02065 PF02798 Glutathione S-transferase, N-terminal domain J4N44_RS02065 PF00043 Glutathione S-transferase, C-terminal domain J4N44_RS02070 PF04386 Stringent starvation protein B J4N44_RS02075 PF04972 BON domain J4N44_RS02080 PF13580 SIS domain J4N44_RS02085 PF02021 Uncharacterised protein family UPF0102 J4N44_RS02090 PF04348 LppC putative lipoprotein J4N44_RS02095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N44_RS02105 PF01795 MraW methylase family J4N44_RS02110 PF04999 Cell division protein FtsL J4N44_RS02115 PF00905 Penicillin binding protein transpeptidase domain J4N44_RS02115 PF03717 Penicillin-binding Protein dimerisation domain J4N44_RS02120 PF01225 Mur ligase family, catalytic domain J4N44_RS02120 PF08245 Mur ligase middle domain J4N44_RS02120 PF02875 Mur ligase family, glutamate ligase domain J4N44_RS02125 PF08245 Mur ligase middle domain J4N44_RS02125 PF02875 Mur ligase family, glutamate ligase domain J4N44_RS02125 PF01225 Mur ligase family, catalytic domain J4N44_RS02130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J4N44_RS02130 PF00953 Glycosyl transferase family 4 J4N44_RS02135 PF08245 Mur ligase middle domain J4N44_RS02135 PF02875 Mur ligase family, glutamate ligase domain J4N44_RS02140 PF01098 Cell cycle protein J4N44_RS02145 PF03033 Glycosyltransferase family 28 N-terminal domain J4N44_RS02145 PF04101 Glycosyltransferase family 28 C-terminal domain J4N44_RS02150 PF01225 Mur ligase family, catalytic domain J4N44_RS02150 PF02875 Mur ligase family, glutamate ligase domain J4N44_RS02150 PF08245 Mur ligase middle domain J4N44_RS02155 PF03799 Cell division protein FtsQ J4N44_RS02155 PF08478 POTRA domain, FtsQ-type J4N44_RS02160 PF02491 SHS2 domain inserted in FTSA J4N44_RS02165 PF12327 FtsZ family, C-terminal domain J4N44_RS02165 PF00091 Tubulin/FtsZ family, GTPase domain J4N44_RS02170 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J4N44_RS02175 PF02810 SEC-C motif J4N44_RS02175 PF07517 SecA DEAD-like domain J4N44_RS02175 PF01043 SecA preprotein cross-linking domain J4N44_RS02175 PF07516 SecA Wing and Scaffold domain J4N44_RS02180 PF00293 NUDIX domain J4N44_RS02185 PF05173 Dihydrodipicolinate reductase, C-terminus J4N44_RS02185 PF01113 Dihydrodipicolinate reductase, N-terminus J4N44_RS02190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J4N44_RS02190 PF00117 Glutamine amidotransferase class-I J4N44_RS02195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J4N44_RS02195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4N44_RS02195 PF02142 MGS-like domain J4N44_RS02210 PF01925 Sulfite exporter TauE/SafE J4N44_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS02215 PF03466 LysR substrate binding domain J4N44_RS02220 PF03458 UPF0126 domain J4N44_RS02225 PF01497 Periplasmic binding protein J4N44_RS02235 PF01048 Phosphorylase superfamily J4N44_RS02245 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N44_RS02245 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS02250 PF01493 GXGXG motif J4N44_RS02250 PF01645 Conserved region in glutamate synthase J4N44_RS02250 PF04898 Glutamate synthase central domain J4N44_RS02250 PF00310 Glutamine amidotransferases class-II J4N44_RS02255 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N44_RS02255 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS02260 PF04898 Glutamate synthase central domain J4N44_RS02260 PF01645 Conserved region in glutamate synthase J4N44_RS02260 PF00310 Glutamine amidotransferases class-II J4N44_RS02260 PF01493 GXGXG motif J4N44_RS02265 PF16199 Radical_SAM C-terminal domain J4N44_RS02265 PF04055 Radical SAM superfamily J4N44_RS02270 PF00563 EAL domain J4N44_RS02270 PF01590 GAF domain J4N44_RS02270 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS02270 PF00360 Phytochrome region J4N44_RS02280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS02280 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS02280 PF18415 Histidine kinase receptor ArcB trans-membrane domain J4N44_RS02280 PF01627 Hpt domain J4N44_RS02280 PF00989 PAS fold J4N44_RS02280 PF00072 Response regulator receiver domain J4N44_RS02290 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS02290 PF00072 Response regulator receiver domain J4N44_RS02300 PF03737 Aldolase/RraA J4N44_RS02310 PF13840 ACT domain J4N44_RS02310 PF01842 ACT domain J4N44_RS02310 PF00742 Homoserine dehydrogenase J4N44_RS02310 PF03447 Homoserine dehydrogenase, NAD binding domain J4N44_RS02310 PF00696 Amino acid kinase family J4N44_RS02315 PF08544 GHMP kinases C terminal J4N44_RS02315 PF00288 GHMP kinases N terminal domain J4N44_RS02320 PF00291 Pyridoxal-phosphate dependent enzyme J4N44_RS02320 PF14821 Threonine synthase N terminus J4N44_RS02325 PF03358 NADPH-dependent FMN reductase J4N44_RS02330 PF01228 Glycine radical J4N44_RS02335 PF01261 Xylose isomerase-like TIM barrel J4N44_RS02340 PF03167 Uracil DNA glycosylase superfamily J4N44_RS02355 PF01235 Sodium:alanine symporter family J4N44_RS02360 PF03883 Peroxide stress protein YaaA J4N44_RS02370 PF00270 DEAD/DEAH box helicase J4N44_RS02370 PF00271 Helicase conserved C-terminal domain J4N44_RS02375 PF05175 Methyltransferase small domain J4N44_RS02380 PF05525 Branched-chain amino acid transport protein J4N44_RS02385 PF00258 Flavodoxin J4N44_RS02390 PF02899 Phage integrase, N-terminal SAM-like domain J4N44_RS02390 PF00589 Phage integrase family J4N44_RS02395 PF10411 Disulfide bond isomerase protein N-terminus J4N44_RS02395 PF13098 Thioredoxin-like domain J4N44_RS02400 PF01368 DHH family J4N44_RS02400 PF02272 DHHA1 domain J4N44_RS02400 PF17768 RecJ OB domain J4N44_RS02410 PF01336 OB-fold nucleic acid binding domain J4N44_RS02410 PF00152 tRNA synthetases class II (D, K and N) J4N44_RS02415 PF02954 Bacterial regulatory protein, Fis family J4N44_RS02415 PF00158 Sigma-54 interaction domain J4N44_RS02415 PF00072 Response regulator receiver domain J4N44_RS02425 PF00248 Aldo/keto reductase family J4N44_RS02435 PF02976 DNA mismatch repair enzyme MutH J4N44_RS02440 PF00293 NUDIX domain J4N44_RS02445 PF01590 GAF domain J4N44_RS02445 PF05524 PEP-utilising enzyme, N-terminal J4N44_RS02445 PF00391 PEP-utilising enzyme, mobile domain J4N44_RS02445 PF02896 PEP-utilising enzyme, TIM barrel domain J4N44_RS02450 PF01925 Sulfite exporter TauE/SafE J4N44_RS02455 PF01790 Prolipoprotein diacylglyceryl transferase J4N44_RS02460 PF00303 Thymidylate synthase J4N44_RS02465 PF02690 Na+/Pi-cotransporter J4N44_RS02470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS02470 PF03466 LysR substrate binding domain J4N44_RS02475 PF01022 Bacterial regulatory protein, arsR family J4N44_RS02480 PF01649 Ribosomal protein S20 J4N44_RS02485 PF03023 Lipid II flippase MurJ J4N44_RS02490 PF06574 FAD synthetase J4N44_RS02490 PF01687 Riboflavin kinase J4N44_RS02495 PF08264 Anticodon-binding domain of tRNA J4N44_RS02495 PF00133 tRNA synthetases class I (I, L, M and V) J4N44_RS02495 PF06827 Zinc finger found in FPG and IleRS J4N44_RS02500 PF01252 Signal peptidase (SPase) II J4N44_RS02505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N44_RS02510 PF02401 LytB protein J4N44_RS02515 PF04397 LytTr DNA-binding domain J4N44_RS02515 PF00072 Response regulator receiver domain J4N44_RS02520 PF07694 5TMR of 5TMR-LYT J4N44_RS02520 PF06580 Histidine kinase J4N44_RS02525 PF02554 Carbon starvation protein CstA J4N44_RS02540 PF01380 SIS domain J4N44_RS02545 PF03702 Anhydro-N-acetylmuramic acid kinase J4N44_RS02550 PF00933 Glycosyl hydrolase family 3 N terminal domain J4N44_RS02555 PF00793 DAHP synthetase I family J4N44_RS02560 PF01817 Chorismate mutase type II J4N44_RS02560 PF02153 Prephenate dehydrogenase J4N44_RS02565 PF04225 Opacity-associated protein A LysM-like domain J4N44_RS02565 PF01551 Peptidase family M23 J4N44_RS02570 PF07238 PilZ domain J4N44_RS02575 PF00005 ABC transporter J4N44_RS02575 PF12848 ABC transporter J4N44_RS02580 PF14718 Soluble lytic murein transglycosylase L domain J4N44_RS02580 PF01464 Transglycosylase SLT domain J4N44_RS02585 PF01371 Trp repressor protein J4N44_RS02590 PF01931 Protein of unknown function DUF84 J4N44_RS02595 PF01817 Chorismate mutase type II J4N44_RS02595 PF00800 Prephenate dehydratase J4N44_RS02600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4N44_RS02605 PF01464 Transglycosylase SLT domain J4N44_RS02610 PF13525 Outer membrane lipoprotein J4N44_RS02615 PF01479 S4 domain J4N44_RS02615 PF00849 RNA pseudouridylate synthase J4N44_RS02620 PF02578 Multi-copper polyphenol oxidoreductase laccase J4N44_RS02625 PF07724 AAA domain (Cdc48 subfamily) J4N44_RS02625 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS02625 PF10431 C-terminal, D2-small domain, of ClpB protein J4N44_RS02625 PF02861 Clp amino terminal domain, pathogenicity island component J4N44_RS02625 PF17871 AAA lid domain J4N44_RS02670 PF03411 Penicillin-insensitive murein endopeptidase J4N44_RS02680 PF00037 4Fe-4S binding domain J4N44_RS02685 PF01136 Peptidase family U32 J4N44_RS02685 PF16325 Peptidase family U32 C-terminal domain J4N44_RS02690 PF04381 Putative exonuclease, RdgC J4N44_RS02695 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS02695 PF00072 Response regulator receiver domain J4N44_RS02700 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS02700 PF11808 Phosphate regulon sensor protein PhoR J4N44_RS02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS02700 PF00989 PAS fold J4N44_RS02705 PF12849 PBP superfamily domain J4N44_RS02710 PF02541 Ppx/GppA phosphatase family J4N44_RS02715 PF02503 Polyphosphate kinase middle domain J4N44_RS02715 PF13090 Polyphosphate kinase C-terminal domain 2 J4N44_RS02715 PF17941 Polyphosphate kinase C-terminal domain 1 J4N44_RS02715 PF13089 Polyphosphate kinase N-terminal domain J4N44_RS02720 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS02725 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS02730 PF00005 ABC transporter J4N44_RS02735 PF01895 PhoU domain J4N44_RS02750 PF03466 LysR substrate binding domain J4N44_RS02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS02755 PF03976 Polyphosphate kinase 2 (PPK2) J4N44_RS02760 PF03932 CutC family J4N44_RS02765 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4N44_RS02765 PF00578 AhpC/TSA family J4N44_RS02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS02770 PF03466 LysR substrate binding domain J4N44_RS02775 PF01274 Malate synthase J4N44_RS02780 PF00463 Isocitrate lyase family J4N44_RS02785 PF00571 CBS domain J4N44_RS02800 PF02547 Queuosine biosynthesis protein J4N44_RS02805 PF01702 Queuine tRNA-ribosyltransferase J4N44_RS02810 PF02699 Preprotein translocase subunit J4N44_RS02815 PF02355 Protein export membrane protein J4N44_RS02815 PF07549 SecD/SecF GG Motif J4N44_RS02815 PF13721 SecD export protein N-terminal TM region J4N44_RS02820 PF07549 SecD/SecF GG Motif J4N44_RS02820 PF02355 Protein export membrane protein J4N44_RS02830 PF00459 Inositol monophosphatase family J4N44_RS02835 PF00588 SpoU rRNA Methylase family J4N44_RS02840 PF02082 Transcriptional regulator J4N44_RS02845 PF00266 Aminotransferase class-V J4N44_RS02850 PF01592 NifU-like N terminal domain J4N44_RS02855 PF01521 Iron-sulphur cluster biosynthesis J4N44_RS02860 PF07743 HSCB C-terminal oligomerisation domain J4N44_RS02860 PF00226 DnaJ domain J4N44_RS02865 PF00012 Hsp70 protein J4N44_RS02870 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N44_RS02875 PF04384 Iron-sulphur cluster assembly J4N44_RS02880 PF12404 Peptidase J4N44_RS02880 PF00883 Cytosol aminopeptidase family, catalytic domain J4N44_RS02885 PF00334 Nucleoside diphosphate kinase J4N44_RS02890 PF04055 Radical SAM superfamily J4N44_RS02895 PF13464 Domain of unknown function (DUF4115) J4N44_RS02900 PF04551 GcpE protein J4N44_RS02905 PF03129 Anticodon binding domain J4N44_RS02905 PF13393 Histidyl-tRNA synthetase J4N44_RS02910 PF09976 Tetratricopeptide repeat-like domain J4N44_RS02915 PF13360 PQQ-like domain J4N44_RS02920 PF01926 50S ribosome-binding GTPase J4N44_RS02920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J4N44_RS02930 PF13185 GAF domain J4N44_RS02930 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS02940 PF02601 Exonuclease VII, large subunit J4N44_RS02940 PF13742 OB-fold nucleic acid binding domain J4N44_RS02945 PF00571 CBS domain J4N44_RS02945 PF00478 IMP dehydrogenase / GMP reductase domain J4N44_RS02950 PF00117 Glutamine amidotransferase class-I J4N44_RS02950 PF02540 NAD synthase J4N44_RS02950 PF00958 GMP synthase C terminal domain J4N44_RS02955 PF03553 Na+/H+ antiporter family J4N44_RS02960 PF00704 Glycosyl hydrolases family 18 J4N44_RS02960 PF06483 Chitinase C J4N44_RS02965 PF01184 GPR1/FUN34/yaaH family J4N44_RS02970 PF01235 Sodium:alanine symporter family J4N44_RS02975 PF01266 FAD dependent oxidoreductase J4N44_RS02980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS02980 PF03466 LysR substrate binding domain J4N44_RS02985 PF00924 Mechanosensitive ion channel J4N44_RS02990 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N44_RS02995 PF01521 Iron-sulphur cluster biosynthesis J4N44_RS03000 PF01458 Uncharacterized protein family (UPF0051) J4N44_RS03005 PF00005 ABC transporter J4N44_RS03010 PF01458 Uncharacterized protein family (UPF0051) J4N44_RS03015 PF00266 Aminotransferase class-V J4N44_RS03020 PF02657 Fe-S metabolism associated domain J4N44_RS03030 PF00202 Aminotransferase class-III J4N44_RS03050 PF12805 FUSC-like inner membrane protein yccS J4N44_RS03055 PF03466 LysR substrate binding domain J4N44_RS03055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS03065 PF01668 SmpB protein J4N44_RS03070 PF03364 Polyketide cyclase / dehydrase and lipid transport J4N44_RS03075 PF03658 RnfH family Ubiquitin J4N44_RS03080 PF04355 SmpA / OmlA family J4N44_RS03085 PF02463 RecF/RecN/SMC N terminal domain J4N44_RS03095 PF01513 ATP-NAD kinase J4N44_RS03100 PF01025 GrpE J4N44_RS03105 PF00375 Sodium:dicarboxylate symporter family J4N44_RS03110 PF00012 Hsp70 protein J4N44_RS03115 PF00226 DnaJ domain J4N44_RS03115 PF01556 DnaJ C terminal domain J4N44_RS03115 PF00684 DnaJ central domain J4N44_RS03120 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS03120 PF00114 Pilin (bacterial filament) J4N44_RS03125 PF00114 Pilin (bacterial filament) J4N44_RS03125 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS03145 PF03806 AbgT putative transporter family J4N44_RS03150 PF14437 MafB19-like deaminase J4N44_RS03155 PF01464 Transglycosylase SLT domain J4N44_RS03155 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS03160 PF02769 AIR synthase related protein, C-terminal domain J4N44_RS03160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J4N44_RS03160 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal J4N44_RS03175 PF00593 TonB dependent receptor J4N44_RS03175 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS03190 PF01546 Peptidase family M20/M25/M40 J4N44_RS03190 PF07687 Peptidase dimerisation domain J4N44_RS03195 PF00860 Permease family J4N44_RS03200 PF00156 Phosphoribosyl transferase domain J4N44_RS03205 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) J4N44_RS03210 PF07417 Sigma factor-binding transcriptional regulator Crl J4N44_RS03215 PF00696 Amino acid kinase family J4N44_RS03215 PF01472 PUA domain J4N44_RS03220 PF00171 Aldehyde dehydrogenase family J4N44_RS03225 PF03477 ATP cone domain J4N44_RS03230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N44_RS03230 PF01872 RibD C-terminal domain J4N44_RS03235 PF00677 Lumazine binding domain J4N44_RS03240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4N44_RS03240 PF00925 GTP cyclohydrolase II J4N44_RS03245 PF00885 6,7-dimethyl-8-ribityllumazine synthase J4N44_RS03250 PF01029 NusB family J4N44_RS03255 PF02769 AIR synthase related protein, C-terminal domain J4N44_RS03255 PF00586 AIR synthase related protein, N-terminal domain J4N44_RS03260 PF04608 Phosphatidylglycerophosphatase A J4N44_RS03265 PF02779 Transketolase, pyrimidine binding domain J4N44_RS03265 PF02780 Transketolase, C-terminal domain J4N44_RS03265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J4N44_RS03270 PF00348 Polyprenyl synthetase J4N44_RS03275 PF02609 Exonuclease VII small subunit J4N44_RS03280 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS03285 PF00691 OmpA family J4N44_RS03285 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N44_RS03285 PF00691 OmpA family J4N44_RS03285 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N44_RS03290 PF02926 THUMP domain J4N44_RS03290 PF02568 Thiamine biosynthesis protein (ThiI) J4N44_RS03295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS03295 PF03466 LysR substrate binding domain J4N44_RS03305 PF04241 Protein of unknown function (DUF423) J4N44_RS03310 PF18125 RlmM ferredoxin-like domain J4N44_RS03310 PF01728 FtsJ-like methyltransferase J4N44_RS03315 PF01223 DNA/RNA non-specific endonuclease J4N44_RS03320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J4N44_RS03320 PF01367 5'-3' exonuclease, C-terminal SAM fold J4N44_RS03325 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases J4N44_RS03325 PF03641 Possible lysine decarboxylase J4N44_RS03325 PF11892 Domain of unknown function (DUF3412) J4N44_RS03330 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS03340 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term J4N44_RS03340 PF14489 QueF-like protein J4N44_RS03345 PF07348 Syd protein (SUKH-2) J4N44_RS03350 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) J4N44_RS03355 PF00149 Calcineurin-like phosphoesterase J4N44_RS03355 PF02872 5'-nucleotidase, C-terminal domain J4N44_RS03365 PF03180 NLPA lipoprotein J4N44_RS03370 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS03375 PF00005 ABC transporter J4N44_RS03375 PF09383 NIL domain J4N44_RS03385 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS03390 PF00367 phosphotransferase system, EIIB J4N44_RS03390 PF02378 Phosphotransferase system, EIIC J4N44_RS03395 PF00128 Alpha amylase, catalytic domain J4N44_RS03395 PF16657 Maltogenic Amylase, C-terminal domain J4N44_RS03410 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4N44_RS03410 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J4N44_RS03415 PF00464 Serine hydroxymethyltransferase J4N44_RS03420 PF04055 Radical SAM superfamily J4N44_RS03420 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J4N44_RS03425 PF03099 Biotin/lipoate A/B protein ligase family J4N44_RS03430 PF04359 Protein of unknown function (DUF493) J4N44_RS03435 PF07943 Penicillin-binding protein 5, C-terminal domain J4N44_RS03435 PF00768 D-alanyl-D-alanine carboxypeptidase J4N44_RS03440 PF03330 Lytic transglycolase J4N44_RS03440 PF05036 Sporulation related domain J4N44_RS03445 PF01098 Cell cycle protein J4N44_RS03450 PF00905 Penicillin binding protein transpeptidase domain J4N44_RS03450 PF03717 Penicillin-binding Protein dimerisation domain J4N44_RS03455 PF02590 Predicted SPOUT methyltransferase J4N44_RS03465 PF06144 DNA polymerase III, delta subunit J4N44_RS03465 PF14840 Processivity clamp loader gamma complex DNA pol III C-term J4N44_RS03470 PF04390 Lipopolysaccharide-assembly J4N44_RS03475 PF00133 tRNA synthetases class I (I, L, M and V) J4N44_RS03475 PF08264 Anticodon-binding domain of tRNA J4N44_RS03475 PF13603 Leucyl-tRNA synthetase, Domain 2 J4N44_RS03480 PF07295 Zinc-ribbon containing domain J4N44_RS03485 PF00795 Carbon-nitrogen hydrolase J4N44_RS03490 PF03471 Transporter associated domain J4N44_RS03490 PF00571 CBS domain J4N44_RS03495 PF02130 Uncharacterized protein family UPF0054 J4N44_RS03500 PF02562 PhoH-like protein J4N44_RS03505 PF01938 TRAM domain J4N44_RS03505 PF00919 Uncharacterized protein family UPF0004 J4N44_RS03505 PF04055 Radical SAM superfamily J4N44_RS03510 PF01494 FAD binding domain J4N44_RS03620 PF01926 50S ribosome-binding GTPase J4N44_RS03620 PF06071 Protein of unknown function (DUF933) J4N44_RS03625 PF01195 Peptidyl-tRNA hydrolase J4N44_RS03630 PF14572 Phosphoribosyl synthetase-associated domain J4N44_RS03630 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J4N44_RS03635 PF00288 GHMP kinases N terminal domain J4N44_RS03635 PF08544 GHMP kinases C terminal J4N44_RS03640 PF03550 Outer membrane lipoprotein LolB J4N44_RS03645 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain J4N44_RS03645 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain J4N44_RS03645 PF01488 Shikimate / quinate 5-dehydrogenase J4N44_RS03650 PF03462 PCRF domain J4N44_RS03650 PF00472 RF-1 domain J4N44_RS03655 PF13847 Methyltransferase domain J4N44_RS03655 PF17827 PrmC N-terminal domain J4N44_RS03660 PF04247 Invasion gene expression up-regulator, SirB J4N44_RS03665 PF13369 Transglutaminase-like superfamily J4N44_RS03670 PF00793 DAHP synthetase I family J4N44_RS03675 PF02872 5'-nucleotidase, C-terminal domain J4N44_RS03675 PF00149 Calcineurin-like phosphoesterase J4N44_RS03680 PF04073 Aminoacyl-tRNA editing domain J4N44_RS03685 PF00849 RNA pseudouridylate synthase J4N44_RS03685 PF01479 S4 domain J4N44_RS03690 PF01713 Smr domain J4N44_RS03715 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N44_RS03715 PF02838 Glycosyl hydrolase family 20, domain 2 J4N44_RS03715 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain J4N44_RS03715 PF03173 Putative carbohydrate binding domain J4N44_RS03730 PF00403 Heavy-metal-associated domain J4N44_RS03735 PF13609 Gram-negative porin J4N44_RS03740 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N44_RS03745 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N44_RS03750 PF01389 OmpA-like transmembrane domain J4N44_RS03750 PF00691 OmpA family J4N44_RS03795 PF00072 Response regulator receiver domain J4N44_RS03795 PF01584 CheW-like domain J4N44_RS03800 PF01739 CheR methyltransferase, SAM binding domain J4N44_RS03800 PF03705 CheR methyltransferase, all-alpha domain J4N44_RS03805 PF00460 Flagella basal body rod protein J4N44_RS03810 PF00460 Flagella basal body rod protein J4N44_RS03810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS03815 PF03963 Flagellar hook capping protein - N-terminal region J4N44_RS03815 PF13860 FlgD Ig-like domain J4N44_RS03815 PF13861 FlgD Tudor-like domain J4N44_RS03820 PF07559 Flagellar basal body protein FlaE J4N44_RS03820 PF00460 Flagella basal body rod protein J4N44_RS03820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS03825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS03825 PF00460 Flagella basal body rod protein J4N44_RS03830 PF00460 Flagella basal body rod protein J4N44_RS03830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS03835 PF02107 Flagellar L-ring protein J4N44_RS03840 PF02119 Flagellar P-ring protein J4N44_RS03845 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N44_RS03845 PF10135 Rod binding protein J4N44_RS03850 PF07196 Flagellin hook IN motif J4N44_RS03850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS03860 PF00700 Bacterial flagellin C-terminal helical region J4N44_RS03860 PF07196 Flagellin hook IN motif J4N44_RS03860 PF00669 Bacterial flagellin N-terminal helical region J4N44_RS03870 PF00669 Bacterial flagellin N-terminal helical region J4N44_RS03870 PF00700 Bacterial flagellin C-terminal helical region J4N44_RS03870 PF07196 Flagellin hook IN motif J4N44_RS03875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N44_RS03880 PF05524 PEP-utilising enzyme, N-terminal J4N44_RS03880 PF00391 PEP-utilising enzyme, mobile domain J4N44_RS03880 PF02896 PEP-utilising enzyme, TIM barrel domain J4N44_RS03885 PF00381 PTS HPr component phosphorylation site J4N44_RS03890 PF00291 Pyridoxal-phosphate dependent enzyme J4N44_RS03900 PF04354 ZipA, C-terminal FtsZ-binding domain J4N44_RS03905 PF12826 Helix-hairpin-helix motif J4N44_RS03905 PF00533 BRCA1 C Terminus (BRCT) domain J4N44_RS03905 PF03120 NAD-dependent DNA ligase OB-fold domain J4N44_RS03905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4N44_RS03905 PF01653 NAD-dependent DNA ligase adenylation domain J4N44_RS03910 PF03573 outer membrane porin, OprD family J4N44_RS03925 PF01145 SPFH domain / Band 7 family J4N44_RS03925 PF16200 C-terminal region of band_7 J4N44_RS03930 PF00085 Thioredoxin J4N44_RS03940 PF00106 short chain dehydrogenase J4N44_RS03945 PF08338 Domain of unknown function (DUF1731) J4N44_RS03945 PF01370 NAD dependent epimerase/dehydratase family J4N44_RS03950 PF07556 Protein of unknown function (DUF1538) J4N44_RS03955 PF07556 Protein of unknown function (DUF1538) J4N44_RS03975 PF12850 Calcineurin-like phosphoesterase superfamily domain J4N44_RS03990 PF17323 Trans-membrane regulatory protein ToxS J4N44_RS03995 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS04000 PF00183 Hsp90 protein J4N44_RS04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS04005 PF05191 Adenylate kinase, active site lid J4N44_RS04010 PF00762 Ferrochelatase J4N44_RS04015 PF00854 POT family J4N44_RS04020 PF02357 Transcription termination factor nusG J4N44_RS04025 PF00733 Asparagine synthase J4N44_RS04025 PF13537 Glutamine amidotransferase domain J4N44_RS04030 PF00999 Sodium/hydrogen exchanger family J4N44_RS04030 PF02254 TrkA-N domain J4N44_RS04035 PF01047 MarR family J4N44_RS04035 PF00480 ROK family J4N44_RS04040 PF01979 Amidohydrolase family J4N44_RS04045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N44_RS04045 PF00367 phosphotransferase system, EIIB J4N44_RS04045 PF02378 Phosphotransferase system, EIIC J4N44_RS04050 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N44_RS04050 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain J4N44_RS04055 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS04060 PF01475 Ferric uptake regulator family J4N44_RS04070 PF00258 Flavodoxin J4N44_RS04080 PF00561 alpha/beta hydrolase fold J4N44_RS04085 PF03925 SeqA protein C-terminal domain J4N44_RS04085 PF17206 SeqA protein N-terminal domain J4N44_RS04090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N44_RS04090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N44_RS04090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N44_RS04090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N44_RS04100 PF01784 NIF3 (NGG1p interacting factor 3) J4N44_RS04105 PF00285 Citrate synthase, C-terminal domain J4N44_RS04110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4N44_RS04115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J4N44_RS04120 PF00890 FAD binding domain J4N44_RS04120 PF02910 Fumarate reductase flavoprotein C-term J4N44_RS04125 PF13085 2Fe-2S iron-sulfur cluster binding domain J4N44_RS04130 PF16870 2-oxoglutarate dehydrogenase C-terminal J4N44_RS04130 PF16078 2-oxoglutarate dehydrogenase N-terminus J4N44_RS04130 PF00676 Dehydrogenase E1 component J4N44_RS04130 PF02779 Transketolase, pyrimidine binding domain J4N44_RS04135 PF02817 e3 binding domain J4N44_RS04135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N44_RS04135 PF00364 Biotin-requiring enzyme J4N44_RS04140 PF00549 CoA-ligase J4N44_RS04140 PF08442 ATP-grasp domain J4N44_RS04145 PF02629 CoA binding domain J4N44_RS04145 PF00549 CoA-ligase J4N44_RS04150 PF00950 ABC 3 transport family J4N44_RS04155 PF00005 ABC transporter J4N44_RS04160 PF01297 Zinc-uptake complex component A periplasmic J4N44_RS04165 PF02311 AraC-like ligand binding domain J4N44_RS04165 PF12833 Helix-turn-helix domain J4N44_RS04170 PF04023 FeoA domain J4N44_RS04175 PF07670 Nucleoside recognition J4N44_RS04175 PF07664 Ferrous iron transport protein B C terminus J4N44_RS04175 PF17910 FeoB cytosolic helical domain J4N44_RS04175 PF02421 Ferrous iron transport protein B J4N44_RS04195 PF03485 Arginyl tRNA synthetase N terminal domain J4N44_RS04195 PF05746 DALR anticodon binding domain J4N44_RS04195 PF00750 tRNA synthetases class I (R) J4N44_RS04200 PF06185 YecM protein J4N44_RS04205 PF01842 ACT domain J4N44_RS04205 PF00551 Formyl transferase J4N44_RS04210 PF13307 Helicase C-terminal domain J4N44_RS04210 PF04851 Type III restriction enzyme, res subunit J4N44_RS04215 PF00814 Glycoprotease family J4N44_RS04225 PF03843 Outer membrane lipoprotein Slp family J4N44_RS04230 PF00561 alpha/beta hydrolase fold J4N44_RS04235 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS04235 PF00501 AMP-binding enzyme J4N44_RS04240 PF01612 3'-5' exonuclease J4N44_RS04240 PF00570 HRDC domain J4N44_RS04245 PF03776 Septum formation topological specificity factor MinE J4N44_RS04250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N44_RS04255 PF05209 Septum formation inhibitor MinC, N-terminal domain J4N44_RS04255 PF03775 Septum formation inhibitor MinC, C-terminal domain J4N44_RS04260 PF05166 YcgL domain J4N44_RS04265 PF13406 Transglycosylase SLT domain J4N44_RS04270 PF03466 LysR substrate binding domain J4N44_RS04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS04275 PF07670 Nucleoside recognition J4N44_RS04275 PF07662 Na+ dependent nucleoside transporter C-terminus J4N44_RS04275 PF01773 Na+ dependent nucleoside transporter N-terminus J4N44_RS04280 PF00145 C-5 cytosine-specific DNA methylase J4N44_RS04290 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J4N44_RS04290 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J4N44_RS04305 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N44_RS04305 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N44_RS04315 PF07977 FabA-like domain J4N44_RS04320 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N44_RS04320 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N44_RS04345 PF00221 Aromatic amino acid lyase J4N44_RS04350 PF00535 Glycosyl transferase family 2 J4N44_RS04355 PF07977 FabA-like domain J4N44_RS04360 PF00501 AMP-binding enzyme J4N44_RS04360 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS04370 PF00550 Phosphopantetheine attachment site J4N44_RS04375 PF00550 Phosphopantetheine attachment site J4N44_RS04400 PF04820 Tryptophan halogenase J4N44_RS04405 PF01209 ubiE/COQ5 methyltransferase family J4N44_RS04430 PF00425 chorismate binding enzyme J4N44_RS04435 PF00501 AMP-binding enzyme J4N44_RS04435 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS04440 PF00550 Phosphopantetheine attachment site J4N44_RS04440 PF00857 Isochorismatase family J4N44_RS04445 PF00668 Condensation domain J4N44_RS04445 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS04445 PF00501 AMP-binding enzyme J4N44_RS04445 PF00975 Thioesterase domain J4N44_RS04445 PF00550 Phosphopantetheine attachment site J4N44_RS04445 PF00550 Phosphopantetheine attachment site J4N44_RS04445 PF00668 Condensation domain J4N44_RS04445 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS04445 PF00975 Thioesterase domain J4N44_RS04445 PF00501 AMP-binding enzyme J4N44_RS04460 PF00593 TonB dependent receptor J4N44_RS04460 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS04465 PF03471 Transporter associated domain J4N44_RS04465 PF01595 Cyclin M transmembrane N-terminal domain J4N44_RS04465 PF00571 CBS domain J4N44_RS04470 PF00270 DEAD/DEAH box helicase J4N44_RS04470 PF00271 Helicase conserved C-terminal domain J4N44_RS04475 PF02080 TrkA-C domain J4N44_RS04475 PF02254 TrkA-N domain J4N44_RS04480 PF02386 Cation transport protein J4N44_RS04490 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J4N44_RS04495 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N44_RS04500 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N44_RS04505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N44_RS04515 PF02954 Bacterial regulatory protein, Fis family J4N44_RS04515 PF00158 Sigma-54 interaction domain J4N44_RS04515 PF00072 Response regulator receiver domain J4N44_RS04520 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS04520 PF02743 Cache domain J4N44_RS04525 PF05697 Bacterial trigger factor protein (TF) J4N44_RS04525 PF05698 Bacterial trigger factor protein (TF) C-terminus J4N44_RS04525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N44_RS04530 PF00574 Clp protease J4N44_RS04535 PF10431 C-terminal, D2-small domain, of ClpB protein J4N44_RS04535 PF06689 ClpX C4-type zinc finger J4N44_RS04535 PF07724 AAA domain (Cdc48 subfamily) J4N44_RS04540 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS04540 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N44_RS04540 PF02190 ATP-dependent protease La (LON) substrate-binding domain J4N44_RS04545 PF00216 Bacterial DNA-binding protein J4N44_RS04550 PF13145 PPIC-type PPIASE domain J4N44_RS04570 PF01966 HD domain J4N44_RS04570 PF13286 Phosphohydrolase-associated domain J4N44_RS04580 PF00155 Aminotransferase class I and II J4N44_RS04585 PF00425 chorismate binding enzyme J4N44_RS04590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N44_RS04590 PF16582 Middle domain of thiamine pyrophosphate J4N44_RS04590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N44_RS04595 PF12697 Alpha/beta hydrolase family J4N44_RS04600 PF00378 Enoyl-CoA hydratase/isomerase J4N44_RS04605 PF13378 Enolase C-terminal domain-like J4N44_RS04610 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS04610 PF00501 AMP-binding enzyme J4N44_RS04615 PF00367 phosphotransferase system, EIIB J4N44_RS04615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 J4N44_RS04615 PF02378 Phosphotransferase system, EIIC J4N44_RS04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS04620 PF03466 LysR substrate binding domain J4N44_RS04630 PF03601 Conserved hypothetical protein 698 J4N44_RS04635 PF07690 Major Facilitator Superfamily J4N44_RS04680 PF13533 Biotin-lipoyl like J4N44_RS04685 PF00873 AcrB/AcrD/AcrF family J4N44_RS04705 PF00291 Pyridoxal-phosphate dependent enzyme J4N44_RS04710 PF01037 Lrp/AsnC ligand binding domain J4N44_RS04710 PF13404 AsnC-type helix-turn-helix domain J4N44_RS04725 PF09619 Type III secretion system lipoprotein chaperone (YscW) J4N44_RS04730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4N44_RS04740 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS04780 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) J4N44_RS04780 PF08463 EcoEI R protein C-terminal J4N44_RS04780 PF00271 Helicase conserved C-terminal domain J4N44_RS04780 PF04851 Type III restriction enzyme, res subunit J4N44_RS04785 PF02384 N-6 DNA Methylase J4N44_RS04785 PF12161 HsdM N-terminal domain J4N44_RS04790 PF01420 Type I restriction modification DNA specificity domain J4N44_RS04810 PF13676 TIR domain J4N44_RS04855 PF00689 Cation transporting ATPase, C-terminus J4N44_RS04855 PF00690 Cation transporter/ATPase, N-terminus J4N44_RS04860 PF00588 SpoU rRNA Methylase family J4N44_RS04860 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4N44_RS04865 PF00037 4Fe-4S binding domain J4N44_RS04865 PF11953 Domain of unknown function (DUF3470) J4N44_RS04875 PF01743 Poly A polymerase head domain J4N44_RS04875 PF00571 CBS domain J4N44_RS04880 PF01554 MatE J4N44_RS04885 PF00403 Heavy-metal-associated domain J4N44_RS04890 PF01048 Phosphorylase superfamily J4N44_RS04900 PF00672 HAMP domain J4N44_RS04900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS04905 PF01230 HIT domain J4N44_RS04920 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J4N44_RS04920 PF13036 Peptidoglycan-synthase activator LpoB J4N44_RS04930 PF05728 Uncharacterised protein family (UPF0227) J4N44_RS04935 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS04950 PF17757 UvrB interaction domain J4N44_RS04950 PF02559 CarD-like/TRCF domain J4N44_RS04950 PF00270 DEAD/DEAH box helicase J4N44_RS04950 PF00271 Helicase conserved C-terminal domain J4N44_RS04950 PF03461 TRCF domain J4N44_RS04960 PF12704 MacB-like periplasmic core domain J4N44_RS04960 PF02687 FtsX-like permease family J4N44_RS04965 PF00005 ABC transporter J4N44_RS04970 PF02687 FtsX-like permease family J4N44_RS04970 PF12704 MacB-like periplasmic core domain J4N44_RS04980 PF03772 Competence protein J4N44_RS04980 PF00753 Metallo-beta-lactamase superfamily J4N44_RS04985 PF00664 ABC transporter transmembrane region J4N44_RS04985 PF00005 ABC transporter J4N44_RS04990 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J4N44_RS04995 PF03966 Trm112p-like protein J4N44_RS05000 PF02348 Cytidylyltransferase J4N44_RS05005 PF04293 SpoVR like protein J4N44_RS05010 PF04285 Protein of unknown function (DUF444) J4N44_RS05015 PF08298 PrkA AAA domain J4N44_RS05015 PF06798 PrkA serine protein kinase C-terminal domain J4N44_RS05020 PF03887 YfbU domain J4N44_RS05030 PF04055 Radical SAM superfamily J4N44_RS05040 PF02901 Pyruvate formate lyase-like J4N44_RS05040 PF01228 Glycine radical J4N44_RS05055 PF00005 ABC transporter J4N44_RS05060 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS05075 PF03372 Endonuclease/Exonuclease/phosphatase family J4N44_RS05080 PF00672 HAMP domain J4N44_RS05080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS05085 PF10689 Protein of unknown function (DUF2496) J4N44_RS05095 PF01925 Sulfite exporter TauE/SafE J4N44_RS05100 PF06733 DEAD_2 J4N44_RS05100 PF13307 Helicase C-terminal domain J4N44_RS05110 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N44_RS05115 PF00849 RNA pseudouridylate synthase J4N44_RS05120 PF03971 Monomeric isocitrate dehydrogenase J4N44_RS05125 PF00313 'Cold-shock' DNA-binding domain J4N44_RS05130 PF02617 ATP-dependent Clp protease adaptor protein ClpS J4N44_RS05135 PF02861 Clp amino terminal domain, pathogenicity island component J4N44_RS05135 PF10431 C-terminal, D2-small domain, of ClpB protein J4N44_RS05135 PF17871 AAA lid domain J4N44_RS05135 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS05135 PF07724 AAA domain (Cdc48 subfamily) J4N44_RS05140 PF01176 Translation initiation factor 1A / IF-1 J4N44_RS05145 PF04377 Arginine-tRNA-protein transferase, C terminus J4N44_RS05145 PF04376 Arginine-tRNA-protein transferase, N terminus J4N44_RS05150 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J4N44_RS05160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4N44_RS05165 PF10692 Protein of unknown function (DUF2498) J4N44_RS05170 PF01396 Topoisomerase DNA binding C4 zinc finger J4N44_RS05170 PF01131 DNA topoisomerase J4N44_RS05170 PF01751 Toprim domain J4N44_RS05170 PF08272 Topoisomerase I zinc-ribbon-like J4N44_RS05175 PF00483 Nucleotidyl transferase J4N44_RS05180 PF00534 Glycosyl transferases group 1 J4N44_RS05180 PF08323 Starch synthase catalytic domain J4N44_RS05200 PF04994 TfoX C-terminal domain J4N44_RS05200 PF04993 TfoX N-terminal domain J4N44_RS05205 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS05210 PF02613 Nitrate reductase delta subunit J4N44_RS05215 PF00072 Response regulator receiver domain J4N44_RS05215 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS05220 PF02698 DUF218 domain J4N44_RS05225 PF13847 Methyltransferase domain J4N44_RS05230 PF03882 MukF winged-helix domain J4N44_RS05230 PF17193 MukF C-terminal domain J4N44_RS05230 PF17192 MukF middle domain J4N44_RS05235 PF04288 MukE-like family J4N44_RS05240 PF04310 MukB N-terminal J4N44_RS05240 PF16330 MukB hinge domain J4N44_RS05250 PF08443 RimK-like ATP-grasp domain J4N44_RS05250 PF18030 RimK PreATP-grasp domain J4N44_RS05260 PF18030 RimK PreATP-grasp domain J4N44_RS05260 PF08443 RimK-like ATP-grasp domain J4N44_RS05265 PF08003 Protein of unknown function (DUF1698) J4N44_RS05270 PF13649 Methyltransferase domain J4N44_RS05275 PF01904 Protein of unknown function DUF72 J4N44_RS05280 PF02938 GAD domain J4N44_RS05280 PF00152 tRNA synthetases class II (D, K and N) J4N44_RS05280 PF01336 OB-fold nucleic acid binding domain J4N44_RS05285 PF02075 Crossover junction endodeoxyribonuclease RuvC J4N44_RS05290 PF00672 HAMP domain J4N44_RS05290 PF02203 Tar ligand binding domain homologue J4N44_RS05290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS05295 PF01330 RuvA N terminal domain J4N44_RS05295 PF07499 RuvA, C-terminal domain J4N44_RS05300 PF05491 RuvB C-terminal winged helix domain J4N44_RS05300 PF17864 RuvB AAA lid domain J4N44_RS05300 PF05496 Holliday junction DNA helicase RuvB P-loop domain J4N44_RS05305 PF01654 Cytochrome bd terminal oxidase subunit I J4N44_RS05310 PF02322 Cytochrome bd terminal oxidase subunit II J4N44_RS05315 PF08173 Membrane bound YbgT-like protein J4N44_RS05325 PF03061 Thioesterase superfamily J4N44_RS05330 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS05335 PF02472 Biopolymer transport protein ExbD/TolR J4N44_RS05345 PF07676 WD40-like Beta Propeller Repeat J4N44_RS05345 PF04052 TolB amino-terminal domain J4N44_RS05350 PF00691 OmpA family J4N44_RS05355 PF13174 Tetratricopeptide repeat J4N44_RS05355 PF16331 TolA binding protein trimerisation J4N44_RS05360 PF00571 CBS domain J4N44_RS05360 PF01380 SIS domain J4N44_RS05365 PF03928 Haem-degrading J4N44_RS05370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4N44_RS05370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N44_RS05375 PF00381 PTS HPr component phosphorylation site J4N44_RS05375 PF02896 PEP-utilising enzyme, TIM barrel domain J4N44_RS05375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS05375 PF05524 PEP-utilising enzyme, N-terminal J4N44_RS05375 PF00391 PEP-utilising enzyme, mobile domain J4N44_RS05385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS05390 PF02901 Pyruvate formate lyase-like J4N44_RS05390 PF01228 Glycine radical J4N44_RS05395 PF04055 Radical SAM superfamily J4N44_RS05400 PF01370 NAD dependent epimerase/dehydratase family J4N44_RS05405 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4N44_RS05410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS05415 PF12833 Helix-turn-helix domain J4N44_RS05420 PF00465 Iron-containing alcohol dehydrogenase J4N44_RS05425 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS05430 PF01238 Phosphomannose isomerase type I J4N44_RS05435 PF02445 Quinolinate synthetase A protein J4N44_RS05445 PF03994 Domain of Unknown Function (DUF350) J4N44_RS05455 PF03738 Glutathionylspermidine synthase preATP-grasp J4N44_RS05465 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS05465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS05465 PF00072 Response regulator receiver domain J4N44_RS05465 PF09308 LuxQ, periplasmic J4N44_RS05470 PF06610 L-alanine exporter J4N44_RS05495 PF12833 Helix-turn-helix domain J4N44_RS05510 PF03958 Bacterial type II/III secretion system short domain J4N44_RS05510 PF00263 Bacterial type II and III secretion system protein J4N44_RS05525 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF J4N44_RS05540 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI J4N44_RS05545 PF01514 Secretory protein of YscJ/FliF family J4N44_RS05555 PF02108 Flagellar assembly protein FliH J4N44_RS05590 PF01312 FlhB HrpN YscU SpaS Family J4N44_RS05595 PF01311 Bacterial export proteins, family 1 J4N44_RS05600 PF01313 Bacterial export proteins, family 3 J4N44_RS05605 PF00813 FliP family J4N44_RS05610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N44_RS05625 PF18269 T3SS EscN ATPase C-terminal domain J4N44_RS05625 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N44_RS05625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N44_RS05630 PF07201 HrpJ-like domain J4N44_RS05635 PF09059 TyeA J4N44_RS05655 PF00771 FHIPEP family J4N44_RS05660 PF09621 Type III secretion system regulator (LcrR) J4N44_RS05675 PF07720 Tetratricopeptide repeat J4N44_RS05685 PF05844 YopD protein J4N44_RS05695 PF13411 MerR HTH family regulatory protein J4N44_RS05700 PF02627 Carboxymuconolactone decarboxylase family J4N44_RS05705 PF02264 LamB porin J4N44_RS05705 PF11471 Maltoporin periplasmic N-terminal extension J4N44_RS05710 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS05715 PF00367 phosphotransferase system, EIIB J4N44_RS05715 PF02378 Phosphotransferase system, EIIC J4N44_RS05720 PF00294 pfkB family carbohydrate kinase J4N44_RS05725 PF00251 Glycosyl hydrolases family 32 N-terminal domain J4N44_RS05725 PF08244 Glycosyl hydrolases family 32 C terminal J4N44_RS05730 PF08274 PhnA Zinc-Ribbon J4N44_RS05730 PF03831 PhnA domain J4N44_RS05740 PF00593 TonB dependent receptor J4N44_RS05740 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS05745 PF00325 Bacterial regulatory proteins, crp family J4N44_RS05745 PF00027 Cyclic nucleotide-binding domain J4N44_RS05770 PF01554 MatE J4N44_RS05775 PF00005 ABC transporter J4N44_RS05775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS05780 PF00005 ABC transporter J4N44_RS05780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS05785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS05790 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS05800 PF00689 Cation transporting ATPase, C-terminus J4N44_RS05800 PF00690 Cation transporter/ATPase, N-terminus J4N44_RS05810 PF00893 Small Multidrug Resistance protein J4N44_RS05815 PF00893 Small Multidrug Resistance protein J4N44_RS05835 PF00672 HAMP domain J4N44_RS05835 PF02743 Cache domain J4N44_RS05835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS05850 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS05850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS05855 PF00873 AcrB/AcrD/AcrF family J4N44_RS05865 PF07729 FCD domain J4N44_RS05865 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS05870 PF01546 Peptidase family M20/M25/M40 J4N44_RS05870 PF07687 Peptidase dimerisation domain J4N44_RS05875 PF03606 C4-dicarboxylate anaerobic carrier J4N44_RS05885 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4N44_RS05905 PF00474 Sodium:solute symporter family J4N44_RS05925 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N44_RS05925 PF14579 Helix-hairpin-helix motif J4N44_RS05925 PF02811 PHP domain J4N44_RS05925 PF00929 Exonuclease J4N44_RS05925 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N44_RS05930 PF00571 CBS domain J4N44_RS05935 PF07729 FCD domain J4N44_RS05935 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS05945 PF07729 FCD domain J4N44_RS05945 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS05955 PF05426 Alginate lyase J4N44_RS05955 PF07940 Heparinase II/III-like protein J4N44_RS05960 PF05426 Alginate lyase J4N44_RS05960 PF07940 Heparinase II/III-like protein J4N44_RS05965 PF07883 Cupin domain J4N44_RS05970 PF00294 pfkB family carbohydrate kinase J4N44_RS05975 PF01081 KDPG and KHG aldolase J4N44_RS05980 PF00474 Sodium:solute symporter family J4N44_RS05990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N44_RS05990 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4N44_RS05995 PF00141 Peroxidase J4N44_RS06000 PF00579 tRNA synthetases class I (W and Y) J4N44_RS06015 PF03372 Endonuclease/Exonuclease/phosphatase family J4N44_RS06020 PF00672 HAMP domain J4N44_RS06020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS06020 PF02743 Cache domain J4N44_RS06025 PF04151 Bacterial pre-peptidase C-terminal domain J4N44_RS06025 PF08453 Peptidase family M9 N-terminal J4N44_RS06025 PF01752 Collagenase J4N44_RS06040 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) J4N44_RS06050 PF03466 LysR substrate binding domain J4N44_RS06050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS06060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4N44_RS06060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4N44_RS06065 PF01037 Lrp/AsnC ligand binding domain J4N44_RS06070 PF17854 FtsK alpha domain J4N44_RS06070 PF09397 Ftsk gamma domain J4N44_RS06070 PF01580 FtsK/SpoIIIE family J4N44_RS06070 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J4N44_RS06075 PF03548 Outer membrane lipoprotein carrier protein LolA J4N44_RS06080 PF12002 MgsA AAA+ ATPase C terminal J4N44_RS06080 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS06080 PF16193 AAA C-terminal domain J4N44_RS06085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N44_RS06085 PF02403 Seryl-tRNA synthetase N-terminal domain J4N44_RS06100 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4N44_RS06105 PF00202 Aminotransferase class-III J4N44_RS06110 PF04055 Radical SAM superfamily J4N44_RS06110 PF06968 Biotin and Thiamin Synthesis associated domain J4N44_RS06115 PF00155 Aminotransferase class I and II J4N44_RS06120 PF08241 Methyltransferase domain J4N44_RS06135 PF01435 Peptidase family M48 J4N44_RS06145 PF00106 short chain dehydrogenase J4N44_RS06170 PF16036 Chalcone isomerase-like J4N44_RS06180 PF00206 Lyase J4N44_RS06180 PF08328 Adenylosuccinate lyase C-terminal J4N44_RS06185 PF04356 Protein of unknown function (DUF489) J4N44_RS06200 PF00294 pfkB family carbohydrate kinase J4N44_RS06205 PF00816 H-NS histone family J4N44_RS06210 PF03553 Na+/H+ antiporter family J4N44_RS06215 PF00072 Response regulator receiver domain J4N44_RS06215 PF02954 Bacterial regulatory protein, Fis family J4N44_RS06215 PF00158 Sigma-54 interaction domain J4N44_RS06220 PF08029 HisG, C-terminal domain J4N44_RS06220 PF01634 ATP phosphoribosyltransferase J4N44_RS06225 PF00815 Histidinol dehydrogenase J4N44_RS06230 PF00155 Aminotransferase class I and II J4N44_RS06235 PF08645 Polynucleotide kinase 3 phosphatase J4N44_RS06235 PF00475 Imidazoleglycerol-phosphate dehydratase J4N44_RS06240 PF00117 Glutamine amidotransferase class-I J4N44_RS06245 PF00977 Histidine biosynthesis protein J4N44_RS06250 PF00977 Histidine biosynthesis protein J4N44_RS06255 PF01502 Phosphoribosyl-AMP cyclohydrolase J4N44_RS06255 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J4N44_RS06260 PF02810 SEC-C motif J4N44_RS06265 PF00563 EAL domain J4N44_RS06265 PF08668 HDOD domain J4N44_RS06270 PF00149 Calcineurin-like phosphoesterase J4N44_RS06275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N44_RS06280 PF01406 tRNA synthetases class I (C) catalytic domain J4N44_RS06280 PF09190 DALR domain J4N44_RS06285 PF00265 Thymidine kinase J4N44_RS06290 PF02698 DUF218 domain J4N44_RS06315 PF01226 Formate/nitrite transporter J4N44_RS06325 PF03649 Uncharacterised protein family (UPF0014) J4N44_RS06330 PF06796 Periplasmic nitrate reductase protein NapE J4N44_RS06335 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N44_RS06340 PF18364 Molybdopterin oxidoreductase N-terminal domain J4N44_RS06340 PF00384 Molybdopterin oxidoreductase J4N44_RS06340 PF01568 Molydopterin dinucleotide binding domain J4N44_RS06345 PF16875 Glycosyl hydrolase family 36 N-terminal domain J4N44_RS06345 PF16874 Glycosyl hydrolase family 36 C-terminal domain J4N44_RS06350 PF01297 Zinc-uptake complex component A periplasmic J4N44_RS06355 PF00005 ABC transporter J4N44_RS06360 PF00950 ABC 3 transport family J4N44_RS06365 PF00950 ABC 3 transport family J4N44_RS06370 PF01368 DHH family J4N44_RS06370 PF02833 DHHA2 domain J4N44_RS06380 PF00005 ABC transporter J4N44_RS06385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS06385 PF00005 ABC transporter J4N44_RS06390 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N44_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS06400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS06405 PF00158 Sigma-54 interaction domain J4N44_RS06405 PF02954 Bacterial regulatory protein, Fis family J4N44_RS06410 PF04012 PspA/IM30 family J4N44_RS06415 PF06667 Phage shock protein B J4N44_RS06430 PF13533 Biotin-lipoyl like J4N44_RS06435 PF00873 AcrB/AcrD/AcrF family J4N44_RS06440 PF03352 Methyladenine glycosylase J4N44_RS06445 PF03280 Proteobacterial lipase chaperone protein J4N44_RS06450 PF00561 alpha/beta hydrolase fold J4N44_RS06455 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N44_RS06460 PF13091 PLD-like domain J4N44_RS06460 PF13396 Phospholipase_D-nuclease N-terminal J4N44_RS06465 PF00209 Sodium:neurotransmitter symporter family J4N44_RS06470 PF12729 Four helix bundle sensory module for signal transduction J4N44_RS06470 PF00672 HAMP domain J4N44_RS06470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS06475 PF00849 RNA pseudouridylate synthase J4N44_RS06485 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N44_RS06485 PF00175 Oxidoreductase NAD-binding domain J4N44_RS06485 PF00970 Oxidoreductase FAD-binding domain J4N44_RS06490 PF03063 Prismane/CO dehydrogenase family J4N44_RS06495 PF01590 GAF domain J4N44_RS06495 PF00158 Sigma-54 interaction domain J4N44_RS06505 PF01066 CDP-alcohol phosphatidyltransferase J4N44_RS06510 PF00005 ABC transporter J4N44_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS06520 PF13416 Bacterial extracellular solute-binding protein J4N44_RS06525 PF09335 SNARE associated Golgi protein J4N44_RS06535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J4N44_RS06535 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS06545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS06545 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS06550 PF00072 Response regulator receiver domain J4N44_RS06550 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS06560 PF00916 Sulfate permease family J4N44_RS06560 PF01740 STAS domain J4N44_RS06570 PF06945 Protein of unknown function (DUF1289) J4N44_RS06580 PF02872 5'-nucleotidase, C-terminal domain J4N44_RS06580 PF00149 Calcineurin-like phosphoesterase J4N44_RS06595 PF01386 Ribosomal L25p family J4N44_RS06600 PF02709 N-terminal domain of galactosyltransferase J4N44_RS06600 PF00535 Glycosyl transferase family 2 J4N44_RS06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS06615 PF00072 Response regulator receiver domain J4N44_RS06615 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS06625 PF00271 Helicase conserved C-terminal domain J4N44_RS06625 PF04851 Type III restriction enzyme, res subunit J4N44_RS06630 PF00849 RNA pseudouridylate synthase J4N44_RS06630 PF01479 S4 domain J4N44_RS06635 PF07690 Major Facilitator Superfamily J4N44_RS06645 PF00474 Sodium:solute symporter family J4N44_RS06650 PF16874 Glycosyl hydrolase family 36 C-terminal domain J4N44_RS06650 PF16875 Glycosyl hydrolase family 36 N-terminal domain J4N44_RS06655 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS06660 PF13460 NAD(P)H-binding J4N44_RS06660 PF11066 Protein of unknown function (DUF2867) J4N44_RS06665 PF01554 MatE J4N44_RS06670 PF00005 ABC transporter J4N44_RS06685 PF06965 Na+/H+ antiporter 1 J4N44_RS06690 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS06690 PF16295 Tetracyclin repressor-like, C-terminal domain J4N44_RS06695 PF09317 Domain of unknown function (DUF1974) J4N44_RS06695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N44_RS06695 PF02770 Acyl-CoA dehydrogenase, middle domain J4N44_RS06695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N44_RS06700 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4N44_RS06700 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4N44_RS06700 PF07055 Enoyl reductase FAD binding domain J4N44_RS06705 PF02080 TrkA-C domain J4N44_RS06705 PF06826 Predicted Permease Membrane Region J4N44_RS06710 PF00462 Glutaredoxin J4N44_RS06715 PF00465 Iron-containing alcohol dehydrogenase J4N44_RS06720 PF01418 Helix-turn-helix domain, rpiR family J4N44_RS06720 PF01380 SIS domain J4N44_RS06725 PF00282 Pyridoxal-dependent decarboxylase conserved domain J4N44_RS06735 PF03956 Lysine exporter LysO J4N44_RS06745 PF04994 TfoX C-terminal domain J4N44_RS06745 PF04993 TfoX N-terminal domain J4N44_RS06760 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS06760 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS06770 PF00266 Aminotransferase class-V J4N44_RS06780 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS06780 PF00563 EAL domain J4N44_RS06780 PF08447 PAS fold J4N44_RS06780 PF08448 PAS fold J4N44_RS06780 PF13426 PAS domain J4N44_RS06780 PF05231 MASE1 J4N44_RS06800 PF03466 LysR substrate binding domain J4N44_RS06800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS06805 PF02447 GntP family permease J4N44_RS06810 PF00291 Pyridoxal-phosphate dependent enzyme J4N44_RS06815 PF00664 ABC transporter transmembrane region J4N44_RS06815 PF00005 ABC transporter J4N44_RS06820 PF00664 ABC transporter transmembrane region J4N44_RS06820 PF00005 ABC transporter J4N44_RS06825 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS06835 PF00266 Aminotransferase class-V J4N44_RS06845 PF08448 PAS fold J4N44_RS06845 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS06850 PF00939 Sodium:sulfate symporter transmembrane region J4N44_RS06855 PF02698 DUF218 domain J4N44_RS06860 PF00390 Malic enzyme, N-terminal domain J4N44_RS06860 PF03949 Malic enzyme, NAD binding domain J4N44_RS06865 PF00270 DEAD/DEAH box helicase J4N44_RS06865 PF08482 ATP-dependent helicase C-terminal J4N44_RS06865 PF04408 Helicase associated domain (HA2) J4N44_RS06865 PF00271 Helicase conserved C-terminal domain J4N44_RS06875 PF16655 PhoD-like phosphatase, N-terminal domain J4N44_RS06875 PF09423 PhoD-like phosphatase J4N44_RS06905 PF00939 Sodium:sulfate symporter transmembrane region J4N44_RS06910 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS06910 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS06915 PF02954 Bacterial regulatory protein, Fis family J4N44_RS06915 PF00072 Response regulator receiver domain J4N44_RS06915 PF00158 Sigma-54 interaction domain J4N44_RS06920 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS06920 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS06920 PF00563 EAL domain J4N44_RS06925 PF11871 Domain of unknown function (DUF3391) J4N44_RS06925 PF01966 HD domain J4N44_RS06930 PF01810 LysE type translocator J4N44_RS06935 PF11230 Protein of unknown function (DUF3029) J4N44_RS06940 PF04055 Radical SAM superfamily J4N44_RS06945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS06945 PF03466 LysR substrate binding domain J4N44_RS06950 PF03741 Integral membrane protein TerC family J4N44_RS06960 PF01966 HD domain J4N44_RS06965 PF00106 short chain dehydrogenase J4N44_RS06970 PF00465 Iron-containing alcohol dehydrogenase J4N44_RS06975 PF03222 Tryptophan/tyrosine permease family J4N44_RS06990 PF00005 ABC transporter J4N44_RS06995 PF01497 Periplasmic binding protein J4N44_RS07000 PF01032 FecCD transport family J4N44_RS07005 PF00593 TonB dependent receptor J4N44_RS07005 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS07020 PF00005 ABC transporter J4N44_RS07020 PF00664 ABC transporter transmembrane region J4N44_RS07025 PF00664 ABC transporter transmembrane region J4N44_RS07025 PF00005 ABC transporter J4N44_RS07030 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS07040 PF03466 LysR substrate binding domain J4N44_RS07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS07050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N44_RS07050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4N44_RS07065 PF00012 Hsp70 protein J4N44_RS07070 PF00012 Hsp70 protein J4N44_RS07080 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS07110 PF01568 Molydopterin dinucleotide binding domain J4N44_RS07110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N44_RS07110 PF00384 Molybdopterin oxidoreductase J4N44_RS07115 PF12800 4Fe-4S binding domain J4N44_RS07115 PF13247 4Fe-4S dicluster domain J4N44_RS07120 PF04976 DMSO reductase anchor subunit (DmsC) J4N44_RS07125 PF02613 Nitrate reductase delta subunit J4N44_RS07135 PF02525 Flavodoxin-like fold J4N44_RS07140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold J4N44_RS07140 PF04408 Helicase associated domain (HA2) J4N44_RS07140 PF11898 Domain of unknown function (DUF3418) J4N44_RS07140 PF00270 DEAD/DEAH box helicase J4N44_RS07140 PF00271 Helicase conserved C-terminal domain J4N44_RS07170 PF04204 Homoserine O-succinyltransferase J4N44_RS07185 PF00893 Small Multidrug Resistance protein J4N44_RS07190 PF13520 Amino acid permease J4N44_RS07195 PF01810 LysE type translocator J4N44_RS07200 PF03466 LysR substrate binding domain J4N44_RS07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS07205 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N44_RS07220 PF01047 MarR family J4N44_RS07230 PF02074 Carboxypeptidase Taq (M32) metallopeptidase J4N44_RS07235 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS07235 PF00072 Response regulator receiver domain J4N44_RS07270 PF01810 LysE type translocator J4N44_RS07280 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS07280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS07285 PF00873 AcrB/AcrD/AcrF family J4N44_RS07290 PF16868 NMT1-like family J4N44_RS07295 PF01925 Sulfite exporter TauE/SafE J4N44_RS07300 PF01970 Tripartite tricarboxylate transporter TctA family J4N44_RS07320 PF00583 Acetyltransferase (GNAT) family J4N44_RS07335 PF00069 Protein kinase domain J4N44_RS07335 PF03793 PASTA domain J4N44_RS07350 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N44_RS07370 PF17871 AAA lid domain J4N44_RS07370 PF10431 C-terminal, D2-small domain, of ClpB protein J4N44_RS07370 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS07370 PF07724 AAA domain (Cdc48 subfamily) J4N44_RS07390 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N44_RS07395 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N44_RS07425 PF04717 Type VI secretion system, phage-baseplate injector J4N44_RS07425 PF06715 Gp5 C-terminal repeat (3 copies) J4N44_RS07445 PF00285 Citrate synthase, C-terminal domain J4N44_RS07450 PF00694 Aconitase C-terminal domain J4N44_RS07450 PF00330 Aconitase family (aconitate hydratase) J4N44_RS07455 PF04303 PrpF protein J4N44_RS07460 PF16177 Acetyl-coenzyme A synthetase N-terminus J4N44_RS07460 PF00501 AMP-binding enzyme J4N44_RS07460 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS07475 PF01544 CorA-like Mg2+ transporter protein J4N44_RS07490 PF04055 Radical SAM superfamily J4N44_RS07495 PF06508 Queuosine biosynthesis protein QueC J4N44_RS07500 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS07500 PF13185 GAF domain J4N44_RS07510 PF05736 OprF membrane domain J4N44_RS07510 PF00691 OmpA family J4N44_RS07530 PF13402 Peptidase M60, enhancin and enhancin-like J4N44_RS07530 PF13322 Domain of unknown function (DUF4092) J4N44_RS07530 PF17291 N-terminal domain of M60-like peptidases J4N44_RS07540 PF02397 Bacterial sugar transferase J4N44_RS07545 PF00535 Glycosyl transferase family 2 J4N44_RS07550 PF13439 Glycosyltransferase Family 4 J4N44_RS07550 PF00534 Glycosyl transferases group 1 J4N44_RS07580 PF00534 Glycosyl transferases group 1 J4N44_RS07590 PF02954 Bacterial regulatory protein, Fis family J4N44_RS07590 PF00072 Response regulator receiver domain J4N44_RS07590 PF00158 Sigma-54 interaction domain J4N44_RS07605 PF10531 SLBB domain J4N44_RS07605 PF02563 Polysaccharide biosynthesis/export protein J4N44_RS07610 PF00691 OmpA family J4N44_RS07615 PF01740 STAS domain J4N44_RS07620 PF14743 DNA ligase OB-like domain J4N44_RS07620 PF01068 ATP dependent DNA ligase domain J4N44_RS07630 PF01554 MatE J4N44_RS07635 PF00677 Lumazine binding domain J4N44_RS07645 PF03881 Fructosamine kinase J4N44_RS07650 PF01339 CheB methylesterase J4N44_RS07650 PF00072 Response regulator receiver domain J4N44_RS07655 PF05230 MASE2 domain J4N44_RS07655 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS07665 PF00877 NlpC/P60 family J4N44_RS07670 PF02743 Cache domain J4N44_RS07670 PF00672 HAMP domain J4N44_RS07670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS07710 PF03942 DTW domain J4N44_RS07715 PF00480 ROK family J4N44_RS07725 PF03453 MoeA N-terminal region (domain I and II) J4N44_RS07725 PF00994 Probable molybdopterin binding domain J4N44_RS07725 PF03454 MoeA C-terminal region (domain IV) J4N44_RS07730 PF12804 MobA-like NTP transferase domain J4N44_RS07735 PF00005 ABC transporter J4N44_RS07735 PF08402 TOBE domain J4N44_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS07745 PF12849 PBP superfamily domain J4N44_RS07750 PF00158 Sigma-54 interaction domain J4N44_RS07750 PF00072 Response regulator receiver domain J4N44_RS07750 PF02954 Bacterial regulatory protein, Fis family J4N44_RS07755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS07755 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS07770 PF00005 ABC transporter J4N44_RS07770 PF12848 ABC transporter J4N44_RS07775 PF02634 FdhD/NarQ family J4N44_RS07795 PF02613 Nitrate reductase delta subunit J4N44_RS07805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N44_RS07805 PF00384 Molybdopterin oxidoreductase J4N44_RS07805 PF01568 Molydopterin dinucleotide binding domain J4N44_RS07810 PF13247 4Fe-4S dicluster domain J4N44_RS07830 PF02146 Sir2 family J4N44_RS07835 PF13416 Bacterial extracellular solute-binding protein J4N44_RS07840 PF13416 Bacterial extracellular solute-binding protein J4N44_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS07850 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS07855 PF00005 ABC transporter J4N44_RS07855 PF08402 TOBE domain J4N44_RS07865 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N44_RS07875 PF01171 PP-loop family J4N44_RS07880 PF00582 Universal stress protein family J4N44_RS07885 PF00027 Cyclic nucleotide-binding domain J4N44_RS07885 PF13545 Crp-like helix-turn-helix domain J4N44_RS07900 PF00403 Heavy-metal-associated domain J4N44_RS07910 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J4N44_RS07910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N44_RS07925 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N44_RS07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS07940 PF09308 LuxQ, periplasmic J4N44_RS07940 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS07940 PF00072 Response regulator receiver domain J4N44_RS08005 PF01381 Helix-turn-helix J4N44_RS08015 PF00145 C-5 cytosine-specific DNA methylase J4N44_RS08045 PF06303 MatP N-terminal domain J4N44_RS08045 PF17414 MatP C-terminal ribbon-helix-helix domain J4N44_RS08050 PF13654 AAA domain J4N44_RS08050 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N44_RS08055 PF07977 FabA-like domain J4N44_RS08060 PF04957 Ribosome modulation factor J4N44_RS08070 PF12848 ABC transporter J4N44_RS08070 PF16326 ABC transporter C-terminal domain J4N44_RS08070 PF00005 ABC transporter J4N44_RS08080 PF02926 THUMP domain J4N44_RS08080 PF01170 Putative RNA methylase family UPF0020 J4N44_RS08080 PF10672 S-adenosylmethionine-dependent methyltransferase J4N44_RS08085 PF07126 Cell-division protein ZapC J4N44_RS08090 PF01180 Dihydroorotate dehydrogenase J4N44_RS08095 PF05088 Bacterial NAD-glutamate dehydrogenase J4N44_RS08105 PF01433 Peptidase family M1 domain J4N44_RS08105 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J4N44_RS08105 PF11940 Domain of unknown function (DUF3458) Ig-like fold J4N44_RS08115 PF11818 C-terminal domain of tail specific protease (DUF3340) J4N44_RS08115 PF00595 PDZ domain J4N44_RS08115 PF03572 Peptidase family S41 J4N44_RS08115 PF17804 Tail specific protease N-terminal domain J4N44_RS08120 PF04352 ProQ/FINO family J4N44_RS08120 PF17516 ProQ C-terminal domain J4N44_RS08125 PF13185 GAF domain J4N44_RS08130 PF00005 ABC transporter J4N44_RS08130 PF00664 ABC transporter transmembrane region J4N44_RS08135 PF04403 Paraquat-inducible protein A J4N44_RS08140 PF02470 MlaD protein J4N44_RS08145 PF01189 16S rRNA methyltransferase RsmB/F J4N44_RS08145 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF J4N44_RS08145 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF J4N44_RS08165 PF00793 DAHP synthetase I family J4N44_RS08170 PF04461 Protein of unknown function (DUF520) J4N44_RS08175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N44_RS08175 PF14824 Sirohaem biosynthesis protein central J4N44_RS08175 PF10414 Sirohaem synthase dimerisation region J4N44_RS08180 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS08185 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS08190 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS08195 PF00005 ABC transporter J4N44_RS08200 PF01027 Inhibitor of apoptosis-promoting Bax1 J4N44_RS08205 PF04358 DsrC like protein J4N44_RS08210 PF00708 Acylphosphatase J4N44_RS08215 PF02743 Cache domain J4N44_RS08215 PF00672 HAMP domain J4N44_RS08215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS08220 PF17785 PUA-like domain J4N44_RS08220 PF10672 S-adenosylmethionine-dependent methyltransferase J4N44_RS08240 PF00691 OmpA family J4N44_RS08240 PF05736 OprF membrane domain J4N44_RS08245 PF00563 EAL domain J4N44_RS08245 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS08245 PF13188 PAS domain J4N44_RS08245 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS08250 PF00072 Response regulator receiver domain J4N44_RS08250 PF01627 Hpt domain J4N44_RS08250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N44_RS08250 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS08250 PF00672 HAMP domain J4N44_RS08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS08265 PF12464 Maltose acetyltransferase J4N44_RS08265 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS08275 PF01928 CYTH domain J4N44_RS08290 PF01047 MarR family J4N44_RS08300 PF03729 Short repeat of unknown function (DUF308) J4N44_RS08305 PF00924 Mechanosensitive ion channel J4N44_RS08315 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family J4N44_RS08325 PF05736 OprF membrane domain J4N44_RS08325 PF00691 OmpA family J4N44_RS08360 PF00437 Type II/IV secretion system protein J4N44_RS08375 PF04972 BON domain J4N44_RS08375 PF00263 Bacterial type II and III secretion system protein J4N44_RS08375 PF13629 Pilus formation protein N terminal region J4N44_RS08395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS08395 PF03466 LysR substrate binding domain J4N44_RS08400 PF12833 Helix-turn-helix domain J4N44_RS08410 PF01752 Collagenase J4N44_RS08410 PF04151 Bacterial pre-peptidase C-terminal domain J4N44_RS08410 PF08453 Peptidase family M9 N-terminal J4N44_RS08420 PF00582 Universal stress protein family J4N44_RS08425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N44_RS08425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J4N44_RS08430 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4N44_RS08435 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J4N44_RS08435 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J4N44_RS08440 PF12833 Helix-turn-helix domain J4N44_RS08445 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS08445 PF00593 TonB dependent receptor J4N44_RS08450 PF12431 Transcriptional regulator J4N44_RS08450 PF00072 Response regulator receiver domain J4N44_RS08455 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain J4N44_RS08455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS08455 PF00989 PAS fold J4N44_RS08455 PF17203 Single cache domain 3 J4N44_RS08470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS08495 PF03466 LysR substrate binding domain J4N44_RS08495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS08500 PF07690 Major Facilitator Superfamily J4N44_RS08510 PF01794 Ferric reductase like transmembrane component J4N44_RS08515 PF00174 Oxidoreductase molybdopterin binding domain J4N44_RS08555 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS08555 PF07729 FCD domain J4N44_RS08560 PF01810 LysE type translocator J4N44_RS08575 PF05368 NmrA-like family J4N44_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS08580 PF03466 LysR substrate binding domain J4N44_RS08585 PF05922 Peptidase inhibitor I9 J4N44_RS08585 PF00082 Subtilase family J4N44_RS08585 PF04151 Bacterial pre-peptidase C-terminal domain J4N44_RS08590 PF03150 Di-haem cytochrome c peroxidase J4N44_RS08590 PF00034 Cytochrome c J4N44_RS08595 PF00696 Amino acid kinase family J4N44_RS08595 PF13840 ACT domain J4N44_RS08600 PF06339 Ectoine synthase J4N44_RS08605 PF00202 Aminotransferase class-III J4N44_RS08610 PF00583 Acetyltransferase (GNAT) family J4N44_RS08615 PF02028 BCCT, betaine/carnitine/choline family transporter J4N44_RS08625 PF00571 CBS domain J4N44_RS08630 PF01554 MatE J4N44_RS08645 PF00884 Sulfatase J4N44_RS08665 PF02311 AraC-like ligand binding domain J4N44_RS08665 PF12833 Helix-turn-helix domain J4N44_RS08685 PF01235 Sodium:alanine symporter family J4N44_RS08690 PF00171 Aldehyde dehydrogenase family J4N44_RS08695 PF01590 GAF domain J4N44_RS08695 PF02954 Bacterial regulatory protein, Fis family J4N44_RS08695 PF00158 Sigma-54 interaction domain J4N44_RS08730 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase J4N44_RS08735 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase J4N44_RS08740 PF04223 Citrate lyase, alpha subunit (CitF) J4N44_RS08745 PF03328 HpcH/HpaI aldolase/citrate lyase family J4N44_RS08750 PF06857 Malonate decarboxylase delta subunit (MdcD) J4N44_RS08755 PF08218 Citrate lyase ligase C-terminal domain J4N44_RS08760 PF03390 2-hydroxycarboxylate transporter family J4N44_RS08765 PF04277 Oxaloacetate decarboxylase, gamma chain J4N44_RS08770 PF02436 Conserved carboxylase domain J4N44_RS08770 PF00364 Biotin-requiring enzyme J4N44_RS08770 PF00682 HMGL-like J4N44_RS08775 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit J4N44_RS08780 PF17203 Single cache domain 3 J4N44_RS08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS08785 PF12431 Transcriptional regulator J4N44_RS08785 PF00072 Response regulator receiver domain J4N44_RS08810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS08825 PF00293 NUDIX domain J4N44_RS08870 PF14497 Glutathione S-transferase, C-terminal domain J4N44_RS08870 PF02798 Glutathione S-transferase, N-terminal domain J4N44_RS08880 PF04209 homogentisate 1,2-dioxygenase J4N44_RS08885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS08895 PF01546 Peptidase family M20/M25/M40 J4N44_RS08895 PF07687 Peptidase dimerisation domain J4N44_RS08900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS08905 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS08910 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS08910 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N44_RS08915 PF00005 ABC transporter J4N44_RS08915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS08920 PF00005 ABC transporter J4N44_RS08920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS08930 PF12561 ToxR activated gene A lipoprotein domain J4N44_RS08930 PF00041 Fibronectin type III domain J4N44_RS08935 PF08453 Peptidase family M9 N-terminal J4N44_RS08935 PF01752 Collagenase J4N44_RS08950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS08950 PF08521 Two-component sensor kinase N-terminal J4N44_RS08950 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS08955 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS08955 PF00072 Response regulator receiver domain J4N44_RS08965 PF00873 AcrB/AcrD/AcrF family J4N44_RS08970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS08970 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS08990 PF01048 Phosphorylase superfamily J4N44_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS09000 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS09005 PF00005 ABC transporter J4N44_RS09005 PF08402 TOBE domain J4N44_RS09010 PF00701 Dihydrodipicolinate synthetase family J4N44_RS09015 PF02423 Ornithine cyclodeaminase/mu-crystallin family J4N44_RS09025 PF01266 FAD dependent oxidoreductase J4N44_RS09030 PF05544 Proline racemase J4N44_RS09035 PF00171 Aldehyde dehydrogenase family J4N44_RS09040 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS09050 PF00072 Response regulator receiver domain J4N44_RS09050 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS09055 PF05971 RNA methyltransferase J4N44_RS09060 PF01863 Protein of unknown function DUF45 J4N44_RS09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS09085 PF03466 LysR substrate binding domain J4N44_RS09090 PF07690 Major Facilitator Superfamily J4N44_RS09135 PF00005 ABC transporter J4N44_RS09140 PF01032 FecCD transport family J4N44_RS09145 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N44_RS09155 PF00300 Histidine phosphatase superfamily (branch 1) J4N44_RS09160 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J4N44_RS09165 PF02654 Cobalamin-5-phosphate synthase J4N44_RS09170 PF02277 Phosphoribosyltransferase J4N44_RS09175 PF01613 Flavin reductase like domain J4N44_RS09180 PF13460 NAD(P)H-binding J4N44_RS09185 PF00375 Sodium:dicarboxylate symporter family J4N44_RS09195 PF08411 Exonuclease C-terminal J4N44_RS09195 PF00929 Exonuclease J4N44_RS09200 PF03788 LrgA family J4N44_RS09205 PF04172 LrgB-like family J4N44_RS09210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N44_RS09210 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region J4N44_RS09215 PF02222 ATP-grasp domain J4N44_RS09220 PF05724 Thiopurine S-methyltransferase (TPMT) J4N44_RS09230 PF00216 Bacterial DNA-binding protein J4N44_RS09270 PF03483 B3/4 domain J4N44_RS09270 PF03484 tRNA synthetase B5 domain J4N44_RS09270 PF03147 Ferredoxin-fold anticodon binding domain J4N44_RS09270 PF01588 Putative tRNA binding domain J4N44_RS09270 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J4N44_RS09275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J4N44_RS09275 PF01409 tRNA synthetases class II core domain (F) J4N44_RS09280 PF17158 Membrane-associated sensor, integral membrane domain J4N44_RS09280 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS09315 PF01906 Putative heavy-metal-binding J4N44_RS09320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS09325 PF01042 Endoribonuclease L-PSP J4N44_RS09330 PF00453 Ribosomal protein L20 J4N44_RS09335 PF01632 Ribosomal protein L35 J4N44_RS09340 PF00707 Translation initiation factor IF-3, C-terminal domain J4N44_RS09340 PF05198 Translation initiation factor IF-3, N-terminal domain J4N44_RS09345 PF02824 TGS domain J4N44_RS09345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N44_RS09345 PF03129 Anticodon binding domain J4N44_RS09345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N44_RS09360 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS09360 PF07702 UTRA domain J4N44_RS09365 PF01979 Amidohydrolase family J4N44_RS09370 PF00491 Arginase family J4N44_RS09375 PF17392 Urocanase C-terminal domain J4N44_RS09375 PF01175 Urocanase Rossmann-like domain J4N44_RS09375 PF17391 Urocanase N-terminal domain J4N44_RS09380 PF00221 Aromatic amino acid lyase J4N44_RS09395 PF13183 4Fe-4S dicluster domain J4N44_RS09395 PF01565 FAD binding domain J4N44_RS09395 PF02913 FAD linked oxidases, C-terminal domain J4N44_RS09410 PF00691 OmpA family J4N44_RS09410 PF05736 OprF membrane domain J4N44_RS09430 PF01259 SAICAR synthetase J4N44_RS09460 PF03352 Methyladenine glycosylase J4N44_RS09460 PF00117 Glutamine amidotransferase class-I J4N44_RS09460 PF00958 GMP synthase C terminal domain J4N44_RS09460 PF13302 Acetyltransferase (GNAT) domain J4N44_RS09460 PF13673 Acetyltransferase (GNAT) domain J4N44_RS09625 PF03575 Peptidase family S51 J4N44_RS09735 PF05016 ParE toxin of type II toxin-antitoxin system, parDE J4N44_RS09765 PF13614 AAA domain J4N44_RS10065 PF00877 NlpC/P60 family J4N44_RS10390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N44_RS10390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N44_RS10475 PF00877 NlpC/P60 family J4N44_RS10480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N44_RS10480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N44_RS10620 PF13495 Phage integrase, N-terminal SAM-like domain J4N44_RS10620 PF00589 Phage integrase family J4N44_RS10635 PF13302 Acetyltransferase (GNAT) domain J4N44_RS10640 PF00158 Sigma-54 interaction domain J4N44_RS10640 PF18024 Helix-turn-helix domain J4N44_RS10645 PF05128 Domain of unknown function (DUF697) J4N44_RS10650 PF04317 YcjX-like family, DUF463 J4N44_RS10665 PF00425 chorismate binding enzyme J4N44_RS10665 PF04715 Anthranilate synthase component I, N terminal region J4N44_RS10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS10670 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS10670 PF09308 LuxQ, periplasmic J4N44_RS10670 PF00072 Response regulator receiver domain J4N44_RS10680 PF00293 NUDIX domain J4N44_RS10685 PF03222 Tryptophan/tyrosine permease family J4N44_RS10690 PF03313 Serine dehydratase alpha chain J4N44_RS10690 PF03315 Serine dehydratase beta chain J4N44_RS10695 PF00563 EAL domain J4N44_RS10695 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS10695 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS10695 PF13188 PAS domain J4N44_RS10710 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS10710 PF00072 Response regulator receiver domain J4N44_RS10715 PF01242 6-pyruvoyl tetrahydropterin synthase J4N44_RS10720 PF17200 Single Cache domain 2 J4N44_RS10720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS10720 PF00672 HAMP domain J4N44_RS10725 PF00152 tRNA synthetases class II (D, K and N) J4N44_RS10725 PF01336 OB-fold nucleic acid binding domain J4N44_RS10740 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS10740 PF00155 Aminotransferase class I and II J4N44_RS10755 PF01966 HD domain J4N44_RS10755 PF00672 HAMP domain J4N44_RS10760 PF00155 Aminotransferase class I and II J4N44_RS10780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS10780 PF00672 HAMP domain J4N44_RS10785 PF02028 BCCT, betaine/carnitine/choline family transporter J4N44_RS10790 PF01047 MarR family J4N44_RS10795 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS10795 PF00072 Response regulator receiver domain J4N44_RS10800 PF17200 Single Cache domain 2 J4N44_RS10800 PF07730 Histidine kinase J4N44_RS10805 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N44_RS10815 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N44_RS10830 PF00753 Metallo-beta-lactamase superfamily J4N44_RS10835 PF05951 Bacterial protein of unknown function (DUF882) J4N44_RS10840 PF01471 Putative peptidoglycan binding domain J4N44_RS10840 PF03734 L,D-transpeptidase catalytic domain J4N44_RS10865 PF00925 GTP cyclohydrolase II J4N44_RS10875 PF03918 Cytochrome C biogenesis protein J4N44_RS10880 PF08534 Redoxin J4N44_RS10885 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4N44_RS10885 PF01578 Cytochrome C assembly protein J4N44_RS10890 PF03916 Polysulphide reductase, NrfD J4N44_RS10895 PF13247 4Fe-4S dicluster domain J4N44_RS10905 PF02335 Cytochrome c552 J4N44_RS10920 PF03989 DNA gyrase C-terminal domain, beta-propeller J4N44_RS10920 PF00521 DNA gyrase/topoisomerase IV, subunit A J4N44_RS10930 PF03477 ATP cone domain J4N44_RS10930 PF00317 Ribonucleotide reductase, all-alpha domain J4N44_RS10930 PF02867 Ribonucleotide reductase, barrel domain J4N44_RS10935 PF00268 Ribonucleotide reductase, small chain J4N44_RS10945 PF00994 Probable molybdopterin binding domain J4N44_RS10945 PF02464 Competence-damaged protein J4N44_RS10960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N44_RS10965 PF16653 Saccharopine dehydrogenase C-terminal domain J4N44_RS10965 PF03435 Saccharopine dehydrogenase NADP binding domain J4N44_RS10970 PF00202 Aminotransferase class-III J4N44_RS10995 PF01066 CDP-alcohol phosphatidyltransferase J4N44_RS11000 PF01541 GIY-YIG catalytic domain J4N44_RS11000 PF02151 UvrB/uvrC motif J4N44_RS11000 PF08459 UvrC Helix-hairpin-helix N-terminal J4N44_RS11005 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS11005 PF00072 Response regulator receiver domain J4N44_RS11010 PF03104 DNA polymerase family B, exonuclease domain J4N44_RS11010 PF00136 DNA polymerase family B J4N44_RS11020 PF09285 Elongation factor P, C-terminal J4N44_RS11020 PF08207 Elongation factor P (EF-P) KOW-like domain J4N44_RS11020 PF01132 Elongation factor P (EF-P) OB domain J4N44_RS11025 PF04269 Protein of unknown function, DUF440 J4N44_RS11030 PF00849 RNA pseudouridylate synthase J4N44_RS11030 PF01479 S4 domain J4N44_RS11040 PF01300 Telomere recombination J4N44_RS11045 PF02811 PHP domain J4N44_RS11050 PF08056 Tryptophan operon leader peptide J4N44_RS11055 PF04715 Anthranilate synthase component I, N terminal region J4N44_RS11055 PF00425 chorismate binding enzyme J4N44_RS11060 PF00117 Glutamine amidotransferase class-I J4N44_RS11065 PF02885 Glycosyl transferase family, helical bundle domain J4N44_RS11065 PF00591 Glycosyl transferase family, a/b domain J4N44_RS11070 PF00218 Indole-3-glycerol phosphate synthase J4N44_RS11070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J4N44_RS11075 PF00291 Pyridoxal-phosphate dependent enzyme J4N44_RS11080 PF00290 Tryptophan synthase alpha chain J4N44_RS11085 PF00375 Sodium:dicarboxylate symporter family J4N44_RS11090 PF17327 Acyl homoserine lactone synthase J4N44_RS11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS11095 PF00072 Response regulator receiver domain J4N44_RS11105 PF04279 Intracellular septation protein A J4N44_RS11110 PF03061 Thioesterase superfamily J4N44_RS11115 PF03795 YCII-related domain J4N44_RS11125 PF08267 Cobalamin-independent synthase, N-terminal domain J4N44_RS11125 PF01717 Cobalamin-independent synthase, Catalytic domain J4N44_RS11130 PF03466 LysR substrate binding domain J4N44_RS11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS11145 PF00498 FHA domain J4N44_RS11145 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS11145 PF00563 EAL domain J4N44_RS11150 PF11842 Domain of unknown function (DUF3362) J4N44_RS11150 PF04055 Radical SAM superfamily J4N44_RS11150 PF08497 Radical SAM N-terminal J4N44_RS11170 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS11170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N44_RS11175 PF00375 Sodium:dicarboxylate symporter family J4N44_RS11180 PF01042 Endoribonuclease L-PSP J4N44_RS11185 PF08348 YheO-like PAS domain J4N44_RS11185 PF13309 HTH domain J4N44_RS11190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS11190 PF00672 HAMP domain J4N44_RS11200 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase J4N44_RS11205 PF00535 Glycosyl transferase family 2 J4N44_RS11210 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS11210 PF00072 Response regulator receiver domain J4N44_RS11215 PF00672 HAMP domain J4N44_RS11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS11215 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS11235 PF03466 LysR substrate binding domain J4N44_RS11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS11240 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS11240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS11250 PF01047 MarR family J4N44_RS11265 PF01717 Cobalamin-independent synthase, Catalytic domain J4N44_RS11265 PF08267 Cobalamin-independent synthase, N-terminal domain J4N44_RS11295 PF00005 ABC transporter J4N44_RS11295 PF12704 MacB-like periplasmic core domain J4N44_RS11295 PF02687 FtsX-like permease family J4N44_RS11300 PF12704 MacB-like periplasmic core domain J4N44_RS11300 PF02687 FtsX-like permease family J4N44_RS11300 PF00005 ABC transporter J4N44_RS11305 PF12704 MacB-like periplasmic core domain J4N44_RS11305 PF02687 FtsX-like permease family J4N44_RS11325 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS11330 PF00583 Acetyltransferase (GNAT) family J4N44_RS11355 PF00085 Thioredoxin J4N44_RS11360 PF11412 Disulphide bond corrector protein DsbC J4N44_RS11360 PF02683 Cytochrome C biogenesis protein transmembrane region J4N44_RS11370 PF03466 LysR substrate binding domain J4N44_RS11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS11375 PF04403 Paraquat-inducible protein A J4N44_RS11380 PF02470 MlaD protein J4N44_RS11385 PF03886 ABC-type transport auxiliary lipoprotein component J4N44_RS11440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS11445 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4N44_RS11450 PF18073 Rubredoxin metal binding domain J4N44_RS11455 PF06305 Lipopolysaccharide assembly protein A domain J4N44_RS11460 PF00216 Bacterial DNA-binding protein J4N44_RS11465 PF00575 S1 RNA binding domain J4N44_RS11470 PF02224 Cytidylate kinase J4N44_RS11475 PF01343 Peptidase family S49 J4N44_RS11475 PF08496 Peptidase family S49 N-terminal J4N44_RS11480 PF00106 short chain dehydrogenase J4N44_RS11495 PF01336 OB-fold nucleic acid binding domain J4N44_RS11495 PF02811 PHP domain J4N44_RS11495 PF14579 Helix-hairpin-helix motif J4N44_RS11495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N44_RS11495 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N44_RS11500 PF00072 Response regulator receiver domain J4N44_RS11500 PF01584 CheW-like domain J4N44_RS11505 PF00480 ROK family J4N44_RS11510 PF00224 Pyruvate kinase, barrel domain J4N44_RS11510 PF02887 Pyruvate kinase, alpha/beta domain J4N44_RS11515 PF01734 Patatin-like phospholipase J4N44_RS11530 PF00209 Sodium:neurotransmitter symporter family J4N44_RS11545 PF02378 Phosphotransferase system, EIIC J4N44_RS11545 PF00367 phosphotransferase system, EIIB J4N44_RS11550 PF01026 TatD related DNase J4N44_RS11555 PF09115 DNA polymerase III, delta subunit, C terminal J4N44_RS11560 PF02223 Thymidylate kinase J4N44_RS11565 PF02618 YceG-like family J4N44_RS11570 PF01063 Amino-transferase class IV J4N44_RS11575 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N44_RS11575 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N44_RS11580 PF00550 Phosphopantetheine attachment site J4N44_RS11590 PF00698 Acyl transferase domain J4N44_RS11595 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N44_RS11595 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N44_RS11600 PF02504 Fatty acid synthesis protein J4N44_RS11605 PF01783 Ribosomal L32p protein family J4N44_RS11610 PF02620 Large ribosomal RNA subunit accumulation protein YceD J4N44_RS11615 PF02545 Maf-like protein J4N44_RS11620 PF00849 RNA pseudouridylate synthase J4N44_RS11620 PF01479 S4 domain J4N44_RS11630 PF10150 Ribonuclease E/G family J4N44_RS11630 PF00575 S1 RNA binding domain J4N44_RS11630 PF12111 Polyribonucleotide phosphorylase C terminal J4N44_RS11635 PF00916 Sulfate permease family J4N44_RS11635 PF01740 STAS domain J4N44_RS11640 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4N44_RS11645 PF12557 Cob(I)alamin adenosyltransferase N terminal J4N44_RS11645 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J4N44_RS11655 PF00485 Phosphoribulokinase / Uridine kinase family J4N44_RS11660 PF10609 NUBPL iron-transfer P-loop NTPase J4N44_RS11665 PF01588 Putative tRNA binding domain J4N44_RS11665 PF09334 tRNA synthetases class I (M) J4N44_RS11675 PF07840 FadR C-terminal domain J4N44_RS11675 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS11680 PF06450 Bacterial Na+/H+ antiporter B (NhaB) J4N44_RS11685 PF02600 Disulfide bond formation protein DsbB J4N44_RS11690 PF01043 SecA preprotein cross-linking domain J4N44_RS11690 PF07516 SecA Wing and Scaffold domain J4N44_RS11690 PF02810 SEC-C motif J4N44_RS11690 PF07517 SecA DEAD-like domain J4N44_RS11695 PF01207 Dihydrouridine synthase (Dus) J4N44_RS11700 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS11705 PF00128 Alpha amylase, catalytic domain J4N44_RS11705 PF02903 Alpha amylase, N-terminal ig-like domain J4N44_RS11710 PF00005 ABC transporter J4N44_RS11715 PF02653 Branched-chain amino acid transport system / permease component J4N44_RS11725 PF04217 Protein of unknown function, DUF412 J4N44_RS11730 PF00871 Acetokinase family J4N44_RS11735 PF07085 DRTGG domain J4N44_RS11735 PF01515 Phosphate acetyl/butaryl transferase J4N44_RS11740 PF13194 Domain of unknown function (DUF4010) J4N44_RS11745 PF13409 Glutathione S-transferase, N-terminal domain J4N44_RS11750 PF00005 ABC transporter J4N44_RS11750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS11755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS11755 PF00005 ABC transporter J4N44_RS11760 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS11760 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N44_RS11765 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS11770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS11775 PF02391 MoaE protein J4N44_RS11780 PF02597 ThiS family J4N44_RS11785 PF01967 MoaC family J4N44_RS11790 PF00994 Probable molybdopterin binding domain J4N44_RS11795 PF06463 Molybdenum Cofactor Synthesis C J4N44_RS11795 PF04055 Radical SAM superfamily J4N44_RS11800 PF01933 Uncharacterised protein family UPF0052 J4N44_RS11805 PF01627 Hpt domain J4N44_RS11810 PF02954 Bacterial regulatory protein, Fis family J4N44_RS11810 PF00072 Response regulator receiver domain J4N44_RS11810 PF00158 Sigma-54 interaction domain J4N44_RS11815 PF04851 Type III restriction enzyme, res subunit J4N44_RS11815 PF17757 UvrB interaction domain J4N44_RS11815 PF12344 Ultra-violet resistance protein B J4N44_RS11815 PF02151 UvrB/uvrC motif J4N44_RS11815 PF00271 Helicase conserved C-terminal domain J4N44_RS11825 PF02901 Pyruvate formate lyase-like J4N44_RS11825 PF01228 Glycine radical J4N44_RS11830 PF02508 Rnf-Nqr subunit, membrane protein J4N44_RS11835 PF04060 Putative Fe-S cluster J4N44_RS11840 PF12838 4Fe-4S dicluster domain J4N44_RS11840 PF10531 SLBB domain J4N44_RS11840 PF13375 RnfC Barrel sandwich hybrid domain J4N44_RS11840 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J4N44_RS11845 PF03116 NQR2, RnfD, RnfE family J4N44_RS11850 PF04205 FMN-binding domain J4N44_RS11855 PF02508 Rnf-Nqr subunit, membrane protein J4N44_RS11860 PF00633 Helix-hairpin-helix motif J4N44_RS11860 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N44_RS11860 PF10576 Iron-sulfur binding domain of endonuclease III J4N44_RS11865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS11870 PF10952 Protein of unknown function (DUF2753) J4N44_RS11875 PF00691 OmpA family J4N44_RS11875 PF18393 MotY N-terminal domain J4N44_RS11880 PF00929 Exonuclease J4N44_RS11885 PF13726 Na+-H+ antiporter family J4N44_RS11885 PF03553 Na+/H+ antiporter family J4N44_RS11895 PF00462 Glutaredoxin J4N44_RS11900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4N44_RS11900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4N44_RS11915 PF00171 Aldehyde dehydrogenase family J4N44_RS11915 PF00465 Iron-containing alcohol dehydrogenase J4N44_RS11920 PF01914 MarC family integral membrane protein J4N44_RS11925 PF00520 Ion transport protein J4N44_RS11925 PF00027 Cyclic nucleotide-binding domain J4N44_RS11930 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N44_RS11930 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N44_RS11935 PF03553 Na+/H+ antiporter family J4N44_RS11950 PF04245 37-kD nucleoid-associated bacterial protein J4N44_RS11955 PF07208 Protein of unknown function (DUF1414) J4N44_RS11960 PF11893 Domain of unknown function (DUF3413) J4N44_RS11960 PF00884 Sulfatase J4N44_RS11975 PF00850 Histone deacetylase domain J4N44_RS11980 PF00106 short chain dehydrogenase J4N44_RS11990 PF01131 DNA topoisomerase J4N44_RS11990 PF01751 Toprim domain J4N44_RS11995 PF00881 Nitroreductase family J4N44_RS12000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N44_RS12000 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS12005 PF01343 Peptidase family S49 J4N44_RS12010 PF00710 Asparaginase, N-terminal J4N44_RS12010 PF17763 Glutaminase/Asparaginase C-terminal domain J4N44_RS12015 PF07023 Protein of unknown function (DUF1315) J4N44_RS12025 PF01641 SelR domain J4N44_RS12030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N44_RS12030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N44_RS12035 PF01263 Aldose 1-epimerase J4N44_RS12040 PF01156 Inosine-uridine preferring nucleoside hydrolase J4N44_RS12045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS12045 PF08447 PAS fold J4N44_RS12045 PF13426 PAS domain J4N44_RS12050 PF13847 Methyltransferase domain J4N44_RS12065 PF02028 BCCT, betaine/carnitine/choline family transporter J4N44_RS12070 PF00245 Alkaline phosphatase J4N44_RS12080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS12085 PF03992 Antibiotic biosynthesis monooxygenase J4N44_RS12090 PF00924 Mechanosensitive ion channel J4N44_RS12090 PF05552 Conserved TM helix J4N44_RS12095 PF04226 Transglycosylase associated protein J4N44_RS12105 PF03692 Putative zinc- or iron-chelating domain J4N44_RS12110 PF03692 Putative zinc- or iron-chelating domain J4N44_RS12125 PF01042 Endoribonuclease L-PSP J4N44_RS12135 PF00230 Major intrinsic protein J4N44_RS12140 PF02132 RecR protein J4N44_RS12140 PF13662 Toprim domain J4N44_RS12145 PF02575 YbaB/EbfC DNA-binding family J4N44_RS12150 PF12169 DNA polymerase III subunits gamma and tau domain III J4N44_RS12150 PF12170 DNA polymerase III tau subunit V interacting with alpha J4N44_RS12155 PF00156 Phosphoribosyl transferase domain J4N44_RS12160 PF04304 Protein of unknown function (DUF454) J4N44_RS12165 PF00072 Response regulator receiver domain J4N44_RS12170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS12170 PF03466 LysR substrate binding domain J4N44_RS12175 PF00156 Phosphoribosyl transferase domain J4N44_RS12180 PF02674 Colicin V production protein J4N44_RS12185 PF05036 Sporulation related domain J4N44_RS12190 PF02875 Mur ligase family, glutamate ligase domain J4N44_RS12190 PF08245 Mur ligase middle domain J4N44_RS12195 PF01039 Carboxyl transferase domain J4N44_RS12195 PF17848 Acetyl-coA carboxylase zinc finger domain J4N44_RS12200 PF01416 tRNA pseudouridine synthase J4N44_RS12210 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N44_RS12210 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N44_RS12215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N44_RS12215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N44_RS12215 PF11890 Domain of unknown function (DUF3410) J4N44_RS12220 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N44_RS12220 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N44_RS12225 PF01266 FAD dependent oxidoreductase J4N44_RS12225 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J4N44_RS12235 PF08891 YfcL protein J4N44_RS12240 PF04315 Elongation factor P hydroxylase J4N44_RS12245 PF03458 UPF0126 domain J4N44_RS12250 PF01264 Chorismate synthase J4N44_RS12255 PF05175 Methyltransferase small domain J4N44_RS12260 PF01713 Smr domain J4N44_RS12265 PF00300 Histidine phosphatase superfamily (branch 1) J4N44_RS12270 PF00675 Insulinase (Peptidase family M16) J4N44_RS12270 PF05193 Peptidase M16 inactive domain J4N44_RS12270 PF16187 Middle or third domain of peptidase_M16 J4N44_RS12280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J4N44_RS12280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J4N44_RS12280 PF00378 Enoyl-CoA hydratase/isomerase J4N44_RS12285 PF02803 Thiolase, C-terminal domain J4N44_RS12285 PF00108 Thiolase, N-terminal domain J4N44_RS12290 PF08281 Sigma-70, region 4 J4N44_RS12290 PF04542 Sigma-70 region 2 J4N44_RS12300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N44_RS12305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N44_RS12310 PF04333 MlaA lipoprotein J4N44_RS12315 PF03918 Cytochrome C biogenesis protein J4N44_RS12320 PF03918 Cytochrome C biogenesis protein J4N44_RS12325 PF08534 Redoxin J4N44_RS12330 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J4N44_RS12330 PF01578 Cytochrome C assembly protein J4N44_RS12335 PF03100 CcmE J4N44_RS12345 PF01578 Cytochrome C assembly protein J4N44_RS12350 PF03379 CcmB protein J4N44_RS12355 PF00005 ABC transporter J4N44_RS12365 PF01584 CheW-like domain J4N44_RS12375 PF13614 AAA domain J4N44_RS12380 PF01339 CheB methylesterase J4N44_RS12380 PF00072 Response regulator receiver domain J4N44_RS12385 PF00072 Response regulator receiver domain J4N44_RS12385 PF01627 Hpt domain J4N44_RS12385 PF02895 Signal transducing histidine kinase, homodimeric domain J4N44_RS12385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS12385 PF01584 CheW-like domain J4N44_RS12390 PF04344 Chemotaxis phosphatase, CheZ J4N44_RS12395 PF00072 Response regulator receiver domain J4N44_RS12400 PF04542 Sigma-70 region 2 J4N44_RS12400 PF04539 Sigma-70 region 3 J4N44_RS12400 PF04545 Sigma-70, region 4 J4N44_RS12405 PF10609 NUBPL iron-transfer P-loop NTPase J4N44_RS12410 PF00448 SRP54-type protein, GTPase domain J4N44_RS12415 PF00771 FHIPEP family J4N44_RS12420 PF01312 FlhB HrpN YscU SpaS Family J4N44_RS12425 PF01311 Bacterial export proteins, family 1 J4N44_RS12430 PF01313 Bacterial export proteins, family 3 J4N44_RS12435 PF00813 FliP family J4N44_RS12440 PF04347 Flagellar biosynthesis protein, FliO J4N44_RS12445 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N44_RS12450 PF02154 Flagellar motor switch protein FliM J4N44_RS12450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N44_RS12475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N44_RS12475 PF18269 T3SS EscN ATPase C-terminal domain J4N44_RS12485 PF01706 FliG C-terminal domain J4N44_RS12485 PF14841 FliG middle domain J4N44_RS12485 PF14842 FliG N-terminal domain J4N44_RS12490 PF08345 Flagellar M-ring protein C-terminal J4N44_RS12490 PF01514 Secretory protein of YscJ/FliF family J4N44_RS12495 PF02049 Flagellar hook-basal body complex protein FliE J4N44_RS12500 PF00072 Response regulator receiver domain J4N44_RS12500 PF00158 Sigma-54 interaction domain J4N44_RS12500 PF02954 Bacterial regulatory protein, Fis family J4N44_RS12505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS12505 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS12505 PF13188 PAS domain J4N44_RS12510 PF06490 Flagellar regulatory protein FleQ J4N44_RS12510 PF02954 Bacterial regulatory protein, Fis family J4N44_RS12510 PF00158 Sigma-54 interaction domain J4N44_RS12515 PF02561 Flagellar protein FliS J4N44_RS12525 PF02465 Flagellar hook-associated protein 2 N-terminus J4N44_RS12525 PF07196 Flagellin hook IN motif J4N44_RS12525 PF07195 Flagellar hook-associated protein 2 C-terminus J4N44_RS12530 PF03646 FlaG protein J4N44_RS12535 PF00700 Bacterial flagellin C-terminal helical region J4N44_RS12535 PF07196 Flagellin hook IN motif J4N44_RS12535 PF00669 Bacterial flagellin N-terminal helical region J4N44_RS12545 PF00700 Bacterial flagellin C-terminal helical region J4N44_RS12545 PF07196 Flagellin hook IN motif J4N44_RS12545 PF00669 Bacterial flagellin N-terminal helical region J4N44_RS12555 PF02056 Family 4 glycosyl hydrolase J4N44_RS12555 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4N44_RS12560 PF12833 Helix-turn-helix domain J4N44_RS12565 PF04261 Dyp-type peroxidase family J4N44_RS12570 PF11143 Protein of unknown function (DUF2919) J4N44_RS12590 PF03960 ArsC family J4N44_RS12595 PF01546 Peptidase family M20/M25/M40 J4N44_RS12595 PF07687 Peptidase dimerisation domain J4N44_RS12610 PF06804 NlpB/DapX lipoprotein J4N44_RS12615 PF00701 Dihydrodipicolinate synthetase family J4N44_RS12620 PF01842 ACT domain J4N44_RS12625 PF00578 AhpC/TSA family J4N44_RS12630 PF01594 AI-2E family transporter J4N44_RS12640 PF01435 Peptidase family M48 J4N44_RS12640 PF13181 Tetratricopeptide repeat J4N44_RS12645 PF03960 ArsC family J4N44_RS12650 PF03358 NADPH-dependent FMN reductase J4N44_RS12665 PF00860 Permease family J4N44_RS12675 PF02769 AIR synthase related protein, C-terminal domain J4N44_RS12675 PF00586 AIR synthase related protein, N-terminal domain J4N44_RS12680 PF00551 Formyl transferase J4N44_RS12685 PF13230 Glutamine amidotransferases class-II J4N44_RS12690 PF13580 SIS domain J4N44_RS12695 PF02770 Acyl-CoA dehydrogenase, middle domain J4N44_RS12695 PF09317 Domain of unknown function (DUF1974) J4N44_RS12695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N44_RS12695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N44_RS12715 PF00929 Exonuclease J4N44_RS12720 PF00075 RNase H J4N44_RS12725 PF08241 Methyltransferase domain J4N44_RS12730 PF16123 Hydroxyacylglutathione hydrolase C-terminus J4N44_RS12735 PF01476 LysM domain J4N44_RS12735 PF01464 Transglycosylase SLT domain J4N44_RS12750 PF00543 Nitrogen regulatory protein P-II J4N44_RS12755 PF00034 Cytochrome c J4N44_RS12760 PF09179 TilS substrate binding domain J4N44_RS12760 PF11734 TilS substrate C-terminal domain J4N44_RS12760 PF01171 PP-loop family J4N44_RS12765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J4N44_RS12770 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N44_RS12770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N44_RS12770 PF14579 Helix-hairpin-helix motif J4N44_RS12770 PF02811 PHP domain J4N44_RS12770 PF01336 OB-fold nucleic acid binding domain J4N44_RS12775 PF01351 Ribonuclease HII J4N44_RS12780 PF02684 Lipid-A-disaccharide synthetase J4N44_RS12785 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J4N44_RS12785 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS12790 PF07977 FabA-like domain J4N44_RS12795 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS12795 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J4N44_RS12800 PF03938 Outer membrane protein (OmpH-like) J4N44_RS12805 PF01103 Surface antigen J4N44_RS12805 PF07244 Surface antigen variable number repeat J4N44_RS12810 PF17820 PDZ domain J4N44_RS12810 PF02163 Peptidase family M50 J4N44_RS12815 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J4N44_RS12815 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J4N44_RS12815 PF13288 DXP reductoisomerase C-terminal domain J4N44_RS12825 PF01255 Putative undecaprenyl diphosphate synthase J4N44_RS12830 PF01765 Ribosome recycling factor J4N44_RS12835 PF00696 Amino acid kinase family J4N44_RS12840 PF00889 Elongation factor TS J4N44_RS12845 PF00318 Ribosomal protein S2 J4N44_RS12850 PF00557 Metallopeptidase family M24 J4N44_RS12855 PF01842 ACT domain J4N44_RS12855 PF08335 GlnD PII-uridylyltransferase J4N44_RS12855 PF01966 HD domain J4N44_RS12855 PF01909 Nucleotidyltransferase domain J4N44_RS12860 PF11944 Protein of unknown function (DUF3461) J4N44_RS12865 PF00849 RNA pseudouridylate synthase J4N44_RS12870 PF04287 tRNA pseudouridine synthase C J4N44_RS12895 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J4N44_RS12905 PF01370 NAD dependent epimerase/dehydratase family J4N44_RS12930 PF03806 AbgT putative transporter family J4N44_RS12935 PF00444 Ribosomal protein L36 J4N44_RS12940 PF01197 Ribosomal protein L31 J4N44_RS12945 PF01980 tRNA-methyltransferase O J4N44_RS12945 PF18389 TrmO C-terminal domain J4N44_RS12950 PF03129 Anticodon binding domain J4N44_RS12950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J4N44_RS12950 PF04073 Aminoacyl-tRNA editing domain J4N44_RS12960 PF06786 Uncharacterised protein family (UPF0253) J4N44_RS12970 PF00209 Sodium:neurotransmitter symporter family J4N44_RS12975 PF00041 Fibronectin type III domain J4N44_RS12975 PF00704 Glycosyl hydrolases family 18 J4N44_RS12985 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N44_RS12985 PF03449 Transcription elongation factor, N-terminal J4N44_RS12990 PF16124 RecQ zinc-binding J4N44_RS12990 PF09382 RQC domain J4N44_RS12990 PF00271 Helicase conserved C-terminal domain J4N44_RS12990 PF00270 DEAD/DEAH box helicase J4N44_RS12990 PF00570 HRDC domain J4N44_RS12995 PF00817 impB/mucB/samB family J4N44_RS12995 PF11799 impB/mucB/samB family C-terminal domain J4N44_RS12995 PF11798 IMS family HHH motif J4N44_RS13000 PF00072 Response regulator receiver domain J4N44_RS13000 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS13010 PF02424 ApbE family J4N44_RS13015 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N44_RS13015 PF00970 Oxidoreductase FAD-binding domain J4N44_RS13015 PF00175 Oxidoreductase NAD-binding domain J4N44_RS13020 PF02508 Rnf-Nqr subunit, membrane protein J4N44_RS13025 PF02508 Rnf-Nqr subunit, membrane protein J4N44_RS13030 PF04205 FMN-binding domain J4N44_RS13035 PF03116 NQR2, RnfD, RnfE family J4N44_RS13040 PF11973 NQRA C-terminal domain J4N44_RS13040 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) J4N44_RS13045 PF01722 BolA-like protein J4N44_RS13050 PF05175 Methyltransferase small domain J4N44_RS13060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N44_RS13065 PF07690 Major Facilitator Superfamily J4N44_RS13075 PF04545 Sigma-70, region 4 J4N44_RS13075 PF04542 Sigma-70 region 2 J4N44_RS13090 PF03502 Nucleoside-specific channel-forming protein, Tsx J4N44_RS13095 PF02558 Ketopantoate reductase PanE/ApbA J4N44_RS13095 PF08546 Ketopantoate reductase PanE/ApbA C terminal J4N44_RS13100 PF01965 DJ-1/PfpI family J4N44_RS13105 PF00266 Aminotransferase class-V J4N44_RS13110 PF02657 Fe-S metabolism associated domain J4N44_RS13115 PF00899 ThiF family J4N44_RS13120 PF03562 MltA specific insert domain J4N44_RS13120 PF06725 3D domain J4N44_RS13130 PF00696 Amino acid kinase family J4N44_RS13130 PF00583 Acetyltransferase (GNAT) family J4N44_RS13150 PF13538 UvrD-like helicase C-terminal domain J4N44_RS13155 PF12705 PD-(D/E)XK nuclease superfamily J4N44_RS13155 PF00580 UvrD/REP helicase N-terminal domain J4N44_RS13155 PF13361 UvrD-like helicase C-terminal domain J4N44_RS13160 PF17946 RecC C-terminal domain J4N44_RS13165 PF11893 Domain of unknown function (DUF3413) J4N44_RS13165 PF00884 Sulfatase J4N44_RS13175 PF03466 LysR substrate binding domain J4N44_RS13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS13180 PF07130 YebG protein J4N44_RS13195 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle J4N44_RS13195 PF14602 Hexapeptide repeat of succinyl-transferase J4N44_RS13200 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N44_RS13205 PF07690 Major Facilitator Superfamily J4N44_RS13210 PF00230 Major intrinsic protein J4N44_RS13215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J4N44_RS13215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J4N44_RS13220 PF08220 DeoR-like helix-turn-helix domain J4N44_RS13220 PF00455 DeoR C terminal sensor domain J4N44_RS13225 PF01266 FAD dependent oxidoreductase J4N44_RS13225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J4N44_RS13230 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J4N44_RS13230 PF01464 Transglycosylase SLT domain J4N44_RS13250 PF01588 Putative tRNA binding domain J4N44_RS13260 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS13265 PF01263 Aldose 1-epimerase J4N44_RS13270 PF08544 GHMP kinases C terminal J4N44_RS13270 PF00288 GHMP kinases N terminal domain J4N44_RS13270 PF10509 Galactokinase galactose-binding signature J4N44_RS13275 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain J4N44_RS13275 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain J4N44_RS13280 PF16363 GDP-mannose 4,6 dehydratase J4N44_RS13285 PF00905 Penicillin binding protein transpeptidase domain J4N44_RS13285 PF03717 Penicillin-binding Protein dimerisation domain J4N44_RS13295 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS13300 PF02837 Glycosyl hydrolases family 2, sugar binding domain J4N44_RS13300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J4N44_RS13300 PF00703 Glycosyl hydrolases family 2 J4N44_RS13300 PF16353 Domain of unknown function(DUF4981) J4N44_RS13300 PF02929 Beta galactosidase small chain J4N44_RS13305 PF04074 YhcH/YjgK/YiaL J4N44_RS13310 PF13520 Amino acid permease J4N44_RS13315 PF03466 LysR substrate binding domain J4N44_RS13315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS13345 PF00437 Type II/IV secretion system protein J4N44_RS13375 PF13629 Pilus formation protein N terminal region J4N44_RS13375 PF00263 Bacterial type II and III secretion system protein J4N44_RS13375 PF04972 BON domain J4N44_RS13400 PF12833 Helix-turn-helix domain J4N44_RS13400 PF02805 Metal binding domain of Ada J4N44_RS13405 PF00501 AMP-binding enzyme J4N44_RS13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS13415 PF03466 LysR substrate binding domain J4N44_RS13420 PF00679 Elongation factor G C-terminus J4N44_RS13420 PF14492 Elongation Factor G, domain II J4N44_RS13420 PF03764 Elongation factor G, domain IV J4N44_RS13420 PF00009 Elongation factor Tu GTP binding domain J4N44_RS13420 PF03144 Elongation factor Tu domain 2 J4N44_RS13425 PF18073 Rubredoxin metal binding domain J4N44_RS13435 PF18429 Domain of unknown function (DUF5609) J4N44_RS13445 PF01048 Phosphorylase superfamily J4N44_RS13450 PF01676 Metalloenzyme superfamily J4N44_RS13455 PF02885 Glycosyl transferase family, helical bundle domain J4N44_RS13455 PF00591 Glycosyl transferase family, a/b domain J4N44_RS13455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J4N44_RS13460 PF01791 DeoC/LacD family aldolase J4N44_RS13465 PF07670 Nucleoside recognition J4N44_RS13465 PF01773 Na+ dependent nucleoside transporter N-terminus J4N44_RS13465 PF07662 Na+ dependent nucleoside transporter C-terminus J4N44_RS13470 PF01026 TatD related DNase J4N44_RS13480 PF16658 Class II release factor RF3, C-terminal domain J4N44_RS13480 PF00009 Elongation factor Tu GTP binding domain J4N44_RS13480 PF03144 Elongation factor Tu domain 2 J4N44_RS13485 PF05230 MASE2 domain J4N44_RS13485 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS13505 PF13508 Acetyltransferase (GNAT) domain J4N44_RS13510 PF02036 SCP-2 sterol transfer family J4N44_RS13515 PF00563 EAL domain J4N44_RS13515 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS13515 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS13520 PF01136 Peptidase family U32 J4N44_RS13525 PF01136 Peptidase family U32 J4N44_RS13530 PF01554 MatE J4N44_RS13540 PF13181 Tetratricopeptide repeat J4N44_RS13540 PF07719 Tetratricopeptide repeat J4N44_RS13545 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J4N44_RS13545 PF00013 KH domain J4N44_RS13545 PF03725 3' exoribonuclease family, domain 2 J4N44_RS13545 PF00575 S1 RNA binding domain J4N44_RS13545 PF01138 3' exoribonuclease family, domain 1 J4N44_RS13550 PF00312 Ribosomal protein S15 J4N44_RS13555 PF09157 Pseudouridine synthase II TruB, C-terminal J4N44_RS13555 PF16198 tRNA pseudouridylate synthase B C-terminal domain J4N44_RS13555 PF01509 TruB family pseudouridylate synthase (N terminal domain) J4N44_RS13560 PF02033 Ribosome-binding factor A J4N44_RS13565 PF04760 Translation initiation factor IF-2, N-terminal region J4N44_RS13565 PF11987 Translation-initiation factor 2 J4N44_RS13565 PF00009 Elongation factor Tu GTP binding domain J4N44_RS13565 PF08364 Bacterial translation initiation factor IF-2 associated region J4N44_RS13570 PF13184 NusA-like KH domain J4N44_RS13570 PF08529 NusA N-terminal domain J4N44_RS13570 PF00575 S1 RNA binding domain J4N44_RS13575 PF02576 RimP N-terminal domain J4N44_RS13575 PF17384 RimP C-terminal SH3 domain J4N44_RS13590 PF03840 Preprotein translocase SecG subunit J4N44_RS13595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N44_RS13595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N44_RS13595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N44_RS13595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N44_RS13600 PF00809 Pterin binding enzyme J4N44_RS13605 PF06480 FtsH Extracellular J4N44_RS13605 PF01434 Peptidase family M41 J4N44_RS13605 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS13605 PF17862 AAA+ lid domain J4N44_RS13610 PF01728 FtsJ-like methyltransferase J4N44_RS13615 PF01985 CRS1 / YhbY (CRM) domain J4N44_RS13620 PF01272 Transcription elongation factor, GreA/GreB, C-term J4N44_RS13620 PF03449 Transcription elongation factor, N-terminal J4N44_RS13625 PF13609 Gram-negative porin J4N44_RS13630 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family J4N44_RS13640 PF00579 tRNA synthetases class I (W and Y) J4N44_RS13645 PF01476 LysM domain J4N44_RS13645 PF08525 Opacity-associated protein A N-terminal motif J4N44_RS13645 PF01551 Peptidase family M23 J4N44_RS13650 PF00873 AcrB/AcrD/AcrF family J4N44_RS13655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS13660 PF01521 Iron-sulphur cluster biosynthesis J4N44_RS13665 PF00202 Aminotransferase class-III J4N44_RS13670 PF01594 AI-2E family transporter J4N44_RS13675 PF05175 Methyltransferase small domain J4N44_RS13675 PF08468 Methyltransferase small domain N-terminal J4N44_RS13685 PF00072 Response regulator receiver domain J4N44_RS13685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS13685 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS13685 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS13690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS13695 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS13700 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS13700 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N44_RS13705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS13705 PF00005 ABC transporter J4N44_RS13710 PF00005 ABC transporter J4N44_RS13710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS13720 PF01869 BadF/BadG/BcrA/BcrD ATPase family J4N44_RS13725 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N44_RS13725 PF02838 Glycosyl hydrolase family 20, domain 2 J4N44_RS13730 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J4N44_RS13730 PF06165 Glycosyltransferase family 36 J4N44_RS13735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N44_RS13735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N44_RS13735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N44_RS13735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N44_RS13740 PF08402 TOBE domain J4N44_RS13740 PF00005 ABC transporter J4N44_RS13750 PF13416 Bacterial extracellular solute-binding protein J4N44_RS13755 PF00909 Ammonium Transporter Family J4N44_RS13760 PF00543 Nitrogen regulatory protein P-II J4N44_RS13765 PF06062 Uncharacterised protein family (UPF0231) J4N44_RS13770 PF11791 Aconitate B N-terminal domain J4N44_RS13770 PF06434 Aconitate hydratase 2 N-terminus J4N44_RS13770 PF00330 Aconitase family (aconitate hydratase) J4N44_RS13775 PF01734 Patatin-like phospholipase J4N44_RS13780 PF14814 Bifunctional transglycosylase second domain J4N44_RS13780 PF00912 Transglycosylase J4N44_RS13780 PF00905 Penicillin binding protein transpeptidase domain J4N44_RS13785 PF04408 Helicase associated domain (HA2) J4N44_RS13785 PF00271 Helicase conserved C-terminal domain J4N44_RS13785 PF08482 ATP-dependent helicase C-terminal J4N44_RS13785 PF00270 DEAD/DEAH box helicase J4N44_RS13790 PF03749 Sugar fermentation stimulation protein RE domain J4N44_RS13790 PF17746 SfsA N-terminal OB domain J4N44_RS13795 PF01258 Prokaryotic dksA/traR C4-type zinc finger J4N44_RS13800 PF00749 tRNA synthetases class I (E and Q), catalytic domain J4N44_RS13805 PF01743 Poly A polymerase head domain J4N44_RS13805 PF12626 Polymerase A arginine-rich C-terminus J4N44_RS13805 PF12627 Probable RNA and SrmB- binding site of polymerase A J4N44_RS13810 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J4N44_RS13815 PF02548 Ketopantoate hydroxymethyltransferase J4N44_RS13820 PF02569 Pantoate-beta-alanine ligase J4N44_RS13825 PF03279 Bacterial lipid A biosynthesis acyltransferase J4N44_RS13830 PF01061 ABC-2 type transporter J4N44_RS13835 PF00005 ABC transporter J4N44_RS13840 PF01740 STAS domain J4N44_RS13840 PF00916 Sulfate permease family J4N44_RS13845 PF00484 Carbonic anhydrase J4N44_RS13850 PF00156 Phosphoribosyl transferase domain J4N44_RS13855 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS13860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N44_RS13865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N44_RS13865 PF00364 Biotin-requiring enzyme J4N44_RS13865 PF02817 e3 binding domain J4N44_RS13870 PF17831 Pyruvate dehydrogenase E1 component middle domain J4N44_RS13870 PF00456 Transketolase, thiamine diphosphate binding domain J4N44_RS13875 PF07729 FCD domain J4N44_RS13875 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS13880 PF01510 N-acetylmuramoyl-L-alanine amidase J4N44_RS13885 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J4N44_RS13885 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J4N44_RS13890 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS13890 PF00114 Pilin (bacterial filament) J4N44_RS13895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N44_RS13895 PF00437 Type II/IV secretion system protein J4N44_RS13900 PF00482 Type II secretion system (T2SS), protein F J4N44_RS13905 PF06750 Bacterial Peptidase A24 N-terminal domain J4N44_RS13905 PF01478 Type IV leader peptidase family J4N44_RS13910 PF01121 Dephospho-CoA kinase J4N44_RS13915 PF07072 Cell division protein J4N44_RS13920 PF03884 DNA gyrase inhibitor YacG J4N44_RS13925 PF01245 Ribosomal protein L19 J4N44_RS13930 PF01746 tRNA (Guanine-1)-methyltransferase J4N44_RS13935 PF01782 RimM N-terminal domain J4N44_RS13935 PF05239 PRC-barrel domain J4N44_RS13940 PF00886 Ribosomal protein S16 J4N44_RS13945 PF02978 Signal peptide binding domain J4N44_RS13945 PF02881 SRP54-type protein, helical bundle domain J4N44_RS13945 PF00448 SRP54-type protein, GTPase domain J4N44_RS13950 PF01578 Cytochrome C assembly protein J4N44_RS13955 PF01595 Cyclin M transmembrane N-terminal domain J4N44_RS13955 PF00571 CBS domain J4N44_RS13955 PF03471 Transporter associated domain J4N44_RS13960 PF02664 S-Ribosylhomocysteinase (LuxS) J4N44_RS13970 PF04262 Glutamate-cysteine ligase J4N44_RS13975 PF00675 Insulinase (Peptidase family M16) J4N44_RS13975 PF05193 Peptidase M16 inactive domain J4N44_RS13980 PF09335 SNARE associated Golgi protein J4N44_RS13985 PF00107 Zinc-binding dehydrogenase J4N44_RS13985 PF08240 Alcohol dehydrogenase GroES-like domain J4N44_RS13990 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit J4N44_RS13995 PF00682 HMGL-like J4N44_RS13995 PF00364 Biotin-requiring enzyme J4N44_RS13995 PF02436 Conserved carboxylase domain J4N44_RS14000 PF04277 Oxaloacetate decarboxylase, gamma chain J4N44_RS14055 PF02599 Global regulator protein family J4N44_RS14060 PF00696 Amino acid kinase family J4N44_RS14060 PF01842 ACT domain J4N44_RS14060 PF13840 ACT domain J4N44_RS14065 PF02272 DHHA1 domain J4N44_RS14065 PF01411 tRNA synthetases class II (A) J4N44_RS14065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J4N44_RS14070 PF02631 RecX family J4N44_RS14075 PF00154 recA bacterial DNA recombination protein J4N44_RS14080 PF02464 Competence-damaged protein J4N44_RS14085 PF00488 MutS domain V J4N44_RS14085 PF05190 MutS family domain IV J4N44_RS14085 PF05192 MutS domain III J4N44_RS14085 PF05188 MutS domain II J4N44_RS14085 PF01624 MutS domain I J4N44_RS14090 PF00140 Sigma-70 factor, region 1.2 J4N44_RS14090 PF04539 Sigma-70 region 3 J4N44_RS14090 PF04545 Sigma-70, region 4 J4N44_RS14090 PF04542 Sigma-70 region 2 J4N44_RS14095 PF01551 Peptidase family M23 J4N44_RS14095 PF01476 LysM domain J4N44_RS14105 PF01975 Survival protein SurE J4N44_RS14110 PF01142 tRNA pseudouridine synthase D (TruD) J4N44_RS14115 PF02542 YgbB family J4N44_RS14120 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J4N44_RS14125 PF04977 Septum formation initiator J4N44_RS14130 PF03952 Enolase, N-terminal domain J4N44_RS14130 PF00113 Enolase, C-terminal TIM barrel domain J4N44_RS14135 PF06418 CTP synthase N-terminus J4N44_RS14135 PF00117 Glutamine amidotransferase class-I J4N44_RS14140 PF03819 MazG nucleotide pyrophosphohydrolase domain J4N44_RS14145 PF13291 ACT domain J4N44_RS14145 PF04607 Region found in RelA / SpoT proteins J4N44_RS14145 PF02824 TGS domain J4N44_RS14150 PF01938 TRAM domain J4N44_RS14150 PF05958 tRNA (Uracil-5-)-methyltransferase J4N44_RS14155 PF00072 Response regulator receiver domain J4N44_RS14155 PF00672 HAMP domain J4N44_RS14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS14155 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS14155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N44_RS14155 PF01627 Hpt domain J4N44_RS14160 PF01648 4'-phosphopantetheinyl transferase superfamily J4N44_RS14165 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J4N44_RS14170 PF02565 Recombination protein O C terminal J4N44_RS14170 PF11967 Recombination protein O N terminal J4N44_RS14175 PF01926 50S ribosome-binding GTPase J4N44_RS14175 PF07650 KH domain J4N44_RS14180 PF14622 Ribonuclease-III-like J4N44_RS14180 PF00035 Double-stranded RNA binding motif J4N44_RS14185 PF10502 Signal peptidase, peptidase S26 J4N44_RS14190 PF00009 Elongation factor Tu GTP binding domain J4N44_RS14190 PF03144 Elongation factor Tu domain 2 J4N44_RS14190 PF06421 GTP-binding protein LepA C-terminus J4N44_RS14190 PF00679 Elongation factor G C-terminus J4N44_RS14200 PF17188 MucB/RseB C-terminal domain J4N44_RS14200 PF03888 MucB/RseB N-terminal domain J4N44_RS14205 PF03873 Anti sigma-E protein RseA, C-terminal domain J4N44_RS14205 PF03872 Anti sigma-E protein RseA, N-terminal domain J4N44_RS14210 PF08281 Sigma-70, region 4 J4N44_RS14210 PF04542 Sigma-70 region 2 J4N44_RS14215 PF02910 Fumarate reductase flavoprotein C-term J4N44_RS14215 PF00890 FAD binding domain J4N44_RS14225 PF03937 Flavinator of succinate dehydrogenase J4N44_RS14245 PF01494 FAD binding domain J4N44_RS14250 PF01494 FAD binding domain J4N44_RS14255 PF03695 Uncharacterised protein family (UPF0149) J4N44_RS14260 PF05164 Cell division protein ZapA J4N44_RS14270 PF01812 5-formyltetrahydrofolate cyclo-ligase family J4N44_RS14275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4N44_RS14280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N44_RS14280 PF01842 ACT domain J4N44_RS14280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N44_RS14285 PF04402 Protein of unknown function (DUF541) J4N44_RS14290 PF03466 LysR substrate binding domain J4N44_RS14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS14295 PF01810 LysE type translocator J4N44_RS14305 PF05552 Conserved TM helix J4N44_RS14305 PF00924 Mechanosensitive ion channel J4N44_RS14310 PF01116 Fructose-bisphosphate aldolase class-II J4N44_RS14315 PF00162 Phosphoglycerate kinase J4N44_RS14320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N44_RS14320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N44_RS14330 PF02779 Transketolase, pyrimidine binding domain J4N44_RS14330 PF02780 Transketolase, C-terminal domain J4N44_RS14330 PF00456 Transketolase, thiamine diphosphate binding domain J4N44_RS14335 PF02772 S-adenosylmethionine synthetase, central domain J4N44_RS14335 PF00438 S-adenosylmethionine synthetase, N-terminal domain J4N44_RS14335 PF02773 S-adenosylmethionine synthetase, C-terminal domain J4N44_RS14345 PF17283 SprT-like zinc ribbon domain J4N44_RS14345 PF10263 SprT-like family J4N44_RS14350 PF04231 Endonuclease I J4N44_RS14355 PF04452 RNA methyltransferase J4N44_RS14360 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J4N44_RS14360 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J4N44_RS14365 PF02622 Uncharacterized ACR, COG1678 J4N44_RS14370 PF03652 Holliday junction resolvase J4N44_RS14375 PF00437 Type II/IV secretion system protein J4N44_RS14380 PF00437 Type II/IV secretion system protein J4N44_RS14385 PF01168 Alanine racemase, N-terminal domain J4N44_RS14390 PF14748 Pyrroline-5-carboxylate reductase dimerisation J4N44_RS14390 PF03807 NADP oxidoreductase coenzyme F420-dependent J4N44_RS14395 PF02325 YGGT family J4N44_RS14400 PF02594 Uncharacterised ACR, YggU family COG1872 J4N44_RS14410 PF01725 Ham1 family J4N44_RS14415 PF06969 HemN C-terminal domain J4N44_RS14415 PF04055 Radical SAM superfamily J4N44_RS14420 PF04960 Glutaminase J4N44_RS14425 PF02086 D12 class N6 adenine-specific DNA methyltransferase J4N44_RS14430 PF02390 Putative methyltransferase J4N44_RS14435 PF00633 Helix-hairpin-helix motif J4N44_RS14435 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N44_RS14435 PF14815 NUDIX domain J4N44_RS14440 PF04362 Bacterial Fe(2+) trafficking J4N44_RS14445 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J4N44_RS14445 PF01464 Transglycosylase SLT domain J4N44_RS14485 PF17200 Single Cache domain 2 J4N44_RS14485 PF00672 HAMP domain J4N44_RS14485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS14515 PF00171 Aldehyde dehydrogenase family J4N44_RS14565 PF00072 Response regulator receiver domain J4N44_RS14570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N44_RS14570 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS14575 PF04794 YdjC-like protein J4N44_RS14580 PF02056 Family 4 glycosyl hydrolase J4N44_RS14580 PF11975 Family 4 glycosyl hydrolase C-terminal domain J4N44_RS14585 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit J4N44_RS14590 PF02378 Phosphotransferase system, EIIC J4N44_RS14595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS14615 PF00106 short chain dehydrogenase J4N44_RS14625 PF03739 Lipopolysaccharide export system permease LptF/LptG J4N44_RS14630 PF03739 Lipopolysaccharide export system permease LptF/LptG J4N44_RS14635 PF02789 Cytosol aminopeptidase family, N-terminal domain J4N44_RS14635 PF00883 Cytosol aminopeptidase family, catalytic domain J4N44_RS14640 PF04364 DNA polymerase III chi subunit, HolC J4N44_RS14645 PF08264 Anticodon-binding domain of tRNA J4N44_RS14645 PF10458 Valyl tRNA synthetase tRNA binding arm J4N44_RS14645 PF00133 tRNA synthetases class I (I, L, M and V) J4N44_RS14655 PF00583 Acetyltransferase (GNAT) family J4N44_RS14665 PF06877 Regulator of ribonuclease activity B J4N44_RS14675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N44_RS14675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N44_RS14680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J4N44_RS14680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J4N44_RS14685 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain J4N44_RS14685 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain J4N44_RS14690 PF01042 Endoribonuclease L-PSP J4N44_RS14695 PF01553 Acyltransferase J4N44_RS14700 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J4N44_RS14705 PF01722 BolA-like protein J4N44_RS14715 PF05494 MlaC protein J4N44_RS14720 PF02470 MlaD protein J4N44_RS14725 PF02405 Permease MlaE J4N44_RS14730 PF00005 ABC transporter J4N44_RS14735 PF01699 Sodium/calcium exchanger protein J4N44_RS14740 PF01380 SIS domain J4N44_RS14740 PF00571 CBS domain J4N44_RS14750 PF03968 OstA-like protein J4N44_RS14755 PF12399 Branched-chain amino acid ATP-binding cassette transporter J4N44_RS14755 PF00005 ABC transporter J4N44_RS14760 PF00309 Sigma-54 factor, Activator interacting domain (AID) J4N44_RS14760 PF04963 Sigma-54 factor, core binding domain J4N44_RS14760 PF04552 Sigma-54, DNA binding domain J4N44_RS14765 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J4N44_RS14770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS14775 PF03668 P-loop ATPase protein family J4N44_RS14780 PF00381 PTS HPr component phosphorylation site J4N44_RS14785 PF00571 CBS domain J4N44_RS14785 PF01769 Divalent cation transporter J4N44_RS14785 PF03448 MgtE intracellular N domain J4N44_RS14790 PF01523 Putative modulator of DNA gyrase J4N44_RS14795 PF04751 Protein of unknown function (DUF615) J4N44_RS14800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N44_RS14800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N44_RS14805 PF00849 RNA pseudouridylate synthase J4N44_RS14815 PF00271 Helicase conserved C-terminal domain J4N44_RS14815 PF12137 RNA polymerase recycling family C-terminal J4N44_RS14815 PF00176 SNF2 family N-terminal domain J4N44_RS14815 PF18339 RapA N-terminal Tudor like domain 1 J4N44_RS14815 PF18337 RapA N-terminal Tudor like domain J4N44_RS14820 PF13638 PIN domain J4N44_RS14820 PF02562 PhoH-like protein J4N44_RS14825 PF01523 Putative modulator of DNA gyrase J4N44_RS14830 PF00795 Carbon-nitrogen hydrolase J4N44_RS14835 PF13502 AsmA-like C-terminal region J4N44_RS14835 PF13116 Protein of unknown function J4N44_RS14840 PF10150 Ribonuclease E/G family J4N44_RS14840 PF00575 S1 RNA binding domain J4N44_RS14845 PF02545 Maf-like protein J4N44_RS14850 PF04093 rod shape-determining protein MreD J4N44_RS14855 PF04085 rod shape-determining protein MreC J4N44_RS14895 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS14905 PF00482 Type II secretion system (T2SS), protein F J4N44_RS14910 PF00437 Type II/IV secretion system protein J4N44_RS14910 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain J4N44_RS14920 PF13401 AAA domain J4N44_RS14920 PF01471 Putative peptidoglycan binding domain J4N44_RS14925 PF00263 Bacterial type II and III secretion system protein J4N44_RS14925 PF03958 Bacterial type II/III secretion system short domain J4N44_RS14945 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS14945 PF17157 Gammaproteobacterial periplasmic sensor domain J4N44_RS14945 PF00563 EAL domain J4N44_RS14950 PF00436 Single-strand binding protein family J4N44_RS14955 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS14960 PF00483 Nucleotidyl transferase J4N44_RS14965 PF17755 UvrA DNA-binding domain J4N44_RS14965 PF00005 ABC transporter J4N44_RS14965 PF17760 UvrA interaction domain J4N44_RS14975 PF00266 Aminotransferase class-V J4N44_RS14980 PF00696 Amino acid kinase family J4N44_RS14980 PF01842 ACT domain J4N44_RS14985 PF02607 B12 binding domain J4N44_RS14985 PF00809 Pterin binding enzyme J4N44_RS14985 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4N44_RS14985 PF02310 B12 binding domain J4N44_RS14985 PF02574 Homocysteine S-methyltransferase J4N44_RS14990 PF00999 Sodium/hydrogen exchanger family J4N44_RS15040 PF01507 Phosphoadenosine phosphosulfate reductase family J4N44_RS15045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N44_RS15045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N44_RS15050 PF00258 Flavodoxin J4N44_RS15050 PF00667 FAD binding domain J4N44_RS15050 PF00175 Oxidoreductase NAD-binding domain J4N44_RS15070 PF01207 Dihydrouridine synthase (Dus) J4N44_RS15075 PF01475 Ferric uptake regulator family J4N44_RS15085 PF00342 Phosphoglucose isomerase J4N44_RS15090 PF01894 Uncharacterised protein family UPF0047 J4N44_RS15100 PF01168 Alanine racemase, N-terminal domain J4N44_RS15100 PF00842 Alanine racemase, C-terminal domain J4N44_RS15105 PF03796 DnaB-like helicase C terminal domain J4N44_RS15105 PF00772 DnaB-like helicase N terminal domain J4N44_RS15115 PF01281 Ribosomal protein L9, N-terminal domain J4N44_RS15115 PF03948 Ribosomal protein L9, C-terminal domain J4N44_RS15120 PF01084 Ribosomal protein S18 J4N44_RS15125 PF01250 Ribosomal protein S6 J4N44_RS15130 PF00834 Ribulose-phosphate 3 epimerase family J4N44_RS15135 PF02086 D12 class N6 adenine-specific DNA methyltransferase J4N44_RS15145 PF01761 3-dehydroquinate synthase J4N44_RS15150 PF01202 Shikimate kinase J4N44_RS15155 PF00263 Bacterial type II and III secretion system protein J4N44_RS15155 PF11741 AMIN domain J4N44_RS15155 PF03958 Bacterial type II/III secretion system short domain J4N44_RS15155 PF07660 Secretin and TonB N terminus short domain J4N44_RS15160 PF04351 Pilus assembly protein, PilP J4N44_RS15180 PF17092 Penicillin-binding protein OB-like domain J4N44_RS15180 PF00912 Transglycosylase J4N44_RS15180 PF00905 Penicillin binding protein transpeptidase domain J4N44_RS15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS15185 PF03466 LysR substrate binding domain J4N44_RS15190 PF00462 Glutaredoxin J4N44_RS15190 PF08534 Redoxin J4N44_RS15195 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS15195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N44_RS15205 PF00206 Lyase J4N44_RS15205 PF00583 Acetyltransferase (GNAT) family J4N44_RS15205 PF14698 Argininosuccinate lyase C-terminal J4N44_RS15210 PF00764 Arginosuccinate synthase J4N44_RS15215 PF00696 Amino acid kinase family J4N44_RS15220 PF01118 Semialdehyde dehydrogenase, NAD binding domain J4N44_RS15220 PF02774 Semialdehyde dehydrogenase, dimerisation domain J4N44_RS15225 PF07687 Peptidase dimerisation domain J4N44_RS15225 PF01546 Peptidase family M20/M25/M40 J4N44_RS15230 PF00311 Phosphoenolpyruvate carboxylase J4N44_RS15240 PF02219 Methylenetetrahydrofolate reductase J4N44_RS15245 PF03447 Homoserine dehydrogenase, NAD binding domain J4N44_RS15245 PF00696 Amino acid kinase family J4N44_RS15245 PF00742 Homoserine dehydrogenase J4N44_RS15250 PF01053 Cys/Met metabolism PLP-dependent enzyme J4N44_RS15255 PF01340 Met Apo-repressor, MetJ J4N44_RS15260 PF00390 Malic enzyme, N-terminal domain J4N44_RS15260 PF03949 Malic enzyme, NAD binding domain J4N44_RS15265 PF00210 Ferritin-like domain J4N44_RS15270 PF04324 BFD-like [2Fe-2S] binding domain J4N44_RS15280 PF00679 Elongation factor G C-terminus J4N44_RS15280 PF14492 Elongation Factor G, domain II J4N44_RS15280 PF03764 Elongation factor G, domain IV J4N44_RS15280 PF00009 Elongation factor Tu GTP binding domain J4N44_RS15280 PF03144 Elongation factor Tu domain 2 J4N44_RS15285 PF00177 Ribosomal protein S7p/S5e J4N44_RS15290 PF00164 Ribosomal protein S12/S23 J4N44_RS15295 PF04077 DsrH like protein J4N44_RS15300 PF02635 DsrE/DsrF-like family J4N44_RS15305 PF02635 DsrE/DsrF-like family J4N44_RS15315 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N44_RS15315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N44_RS15325 PF04102 SlyX J4N44_RS15330 PF01112 Asparaginase J4N44_RS15335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N44_RS15345 PF00999 Sodium/hydrogen exchanger family J4N44_RS15345 PF02254 TrkA-N domain J4N44_RS15350 PF02525 Flavodoxin-like fold J4N44_RS15355 PF00005 ABC transporter J4N44_RS15355 PF12848 ABC transporter J4N44_RS15365 PF00561 alpha/beta hydrolase fold J4N44_RS15370 PF06794 Uncharacterised protein family (UPF0270) J4N44_RS15375 PF00485 Phosphoribulokinase / Uridine kinase family J4N44_RS15380 PF13545 Crp-like helix-turn-helix domain J4N44_RS15380 PF00027 Cyclic nucleotide-binding domain J4N44_RS15390 PF00171 Aldehyde dehydrogenase family J4N44_RS15395 PF04958 Arginine N-succinyltransferase beta subunit J4N44_RS15400 PF00202 Aminotransferase class-III J4N44_RS15405 PF00117 Glutamine amidotransferase class-I J4N44_RS15415 PF00267 Gram-negative porin J4N44_RS15425 PF00579 tRNA synthetases class I (W and Y) J4N44_RS15430 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS15435 PF08032 RNA 2'-O ribose methyltransferase substrate binding J4N44_RS15435 PF00588 SpoU rRNA Methylase family J4N44_RS15440 PF08206 Ribonuclease B OB domain J4N44_RS15440 PF17876 Cold shock domain J4N44_RS15440 PF00575 S1 RNA binding domain J4N44_RS15440 PF00773 RNB domain J4N44_RS15440 PF08461 Ribonuclease R winged-helix domain J4N44_RS15445 PF02082 Transcriptional regulator J4N44_RS15450 PF00175 Oxidoreductase NAD-binding domain J4N44_RS15450 PF00042 Globin J4N44_RS15450 PF00970 Oxidoreductase FAD-binding domain J4N44_RS15455 PF08238 Sel1 repeat J4N44_RS15460 PF00709 Adenylosuccinate synthetase J4N44_RS15465 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) J4N44_RS15470 PF01145 SPFH domain / Band 7 family J4N44_RS15475 PF01145 SPFH domain / Band 7 family J4N44_RS15475 PF12221 Bacterial membrane protein N terminal J4N44_RS15480 PF16360 GTP-binding GTPase Middle Region J4N44_RS15480 PF13167 GTP-binding GTPase N-terminal J4N44_RS15480 PF01926 50S ribosome-binding GTPase J4N44_RS15485 PF17209 Hfq protein J4N44_RS15495 PF08676 MutL C terminal dimerisation domain J4N44_RS15495 PF01119 DNA mismatch repair protein, C-terminal domain J4N44_RS15500 PF01520 N-acetylmuramoyl-L-alanine amidase J4N44_RS15505 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J4N44_RS15510 PF08331 Domain of unknown function (DUF1730) J4N44_RS15575 PF00929 Exonuclease J4N44_RS15580 PF03193 RsgA GTPase J4N44_RS15585 PF02666 Phosphatidylserine decarboxylase J4N44_RS15590 PF00939 Sodium:sulfate symporter transmembrane region J4N44_RS15595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS15595 PF00672 HAMP domain J4N44_RS15605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J4N44_RS15605 PF01676 Metalloenzyme superfamily J4N44_RS15610 PF00581 Rhodanese-like domain J4N44_RS15615 PF02556 Preprotein translocase subunit SecB J4N44_RS15620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J4N44_RS15620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J4N44_RS15625 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS15625 PF06426 Serine acetyltransferase, N-terminal J4N44_RS15630 PF01551 Peptidase family M23 J4N44_RS15640 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS15640 PF08360 QacR-like protein, C-terminal region J4N44_RS15650 PF00152 tRNA synthetases class II (D, K and N) J4N44_RS15655 PF02910 Fumarate reductase flavoprotein C-term J4N44_RS15655 PF00890 FAD binding domain J4N44_RS15660 PF13085 2Fe-2S iron-sulfur cluster binding domain J4N44_RS15660 PF13183 4Fe-4S dicluster domain J4N44_RS15665 PF02300 Fumarate reductase subunit C J4N44_RS15670 PF02313 Fumarate reductase subunit D J4N44_RS15685 PF01132 Elongation factor P (EF-P) OB domain J4N44_RS15685 PF08207 Elongation factor P (EF-P) KOW-like domain J4N44_RS15685 PF09285 Elongation factor P, C-terminal J4N44_RS15690 PF04055 Radical SAM superfamily J4N44_RS15695 PF02308 MgtC family J4N44_RS15705 PF00118 TCP-1/cpn60 chaperonin family J4N44_RS15710 PF00166 Chaperonin 10 Kd subunit J4N44_RS15715 PF01554 MatE J4N44_RS15720 PF00365 Phosphofructokinase J4N44_RS15725 PF01545 Cation efflux family J4N44_RS15725 PF16916 Dimerisation domain of Zinc Transporter J4N44_RS15730 PF07813 LTXXQ motif family protein J4N44_RS15735 PF00072 Response regulator receiver domain J4N44_RS15735 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS15740 PF16527 Two-component sensor protein CpxA, periplasmic domain J4N44_RS15740 PF00672 HAMP domain J4N44_RS15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS15740 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS15745 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J4N44_RS15745 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J4N44_RS15750 PF00588 SpoU rRNA Methylase family J4N44_RS15755 PF04186 FxsA cytoplasmic membrane protein J4N44_RS15760 PF00206 Lyase J4N44_RS15760 PF10415 Fumarase C C-terminus J4N44_RS15765 PF03605 Anaerobic c4-dicarboxylate membrane transporter J4N44_RS15770 PF11412 Disulphide bond corrector protein DsbC J4N44_RS15770 PF02683 Cytochrome C biogenesis protein transmembrane region J4N44_RS15775 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS15775 PF00072 Response regulator receiver domain J4N44_RS15780 PF01914 MarC family integral membrane protein J4N44_RS15790 PF00474 Sodium:solute symporter family J4N44_RS15805 PF10415 Fumarase C C-terminus J4N44_RS15805 PF00206 Lyase J4N44_RS15810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS15810 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS15810 PF01627 Hpt domain J4N44_RS15810 PF00072 Response regulator receiver domain J4N44_RS15810 PF00672 HAMP domain J4N44_RS15815 PF12832 MFS_1 like family J4N44_RS15830 PF16177 Acetyl-coenzyme A synthetase N-terminus J4N44_RS15830 PF00501 AMP-binding enzyme J4N44_RS15830 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS15835 PF01220 Dehydroquinase class II J4N44_RS15840 PF00364 Biotin-requiring enzyme J4N44_RS15845 PF02785 Biotin carboxylase C-terminal domain J4N44_RS15845 PF00289 Biotin carboxylase, N-terminal domain J4N44_RS15845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J4N44_RS15855 PF01207 Dihydrouridine synthase (Dus) J4N44_RS15860 PF02954 Bacterial regulatory protein, Fis family J4N44_RS15865 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS15865 PF08448 PAS fold J4N44_RS15910 PF08240 Alcohol dehydrogenase GroES-like domain J4N44_RS15910 PF00107 Zinc-binding dehydrogenase J4N44_RS15915 PF01276 Orn/Lys/Arg decarboxylase, major domain J4N44_RS15915 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4N44_RS15915 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J4N44_RS15920 PF13520 Amino acid permease J4N44_RS15925 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS15925 PF18500 CadC C-terminal domain 1 J4N44_RS15930 PF13411 MerR HTH family regulatory protein J4N44_RS15935 PF01808 AICARFT/IMPCHase bienzyme J4N44_RS15935 PF02142 MGS-like domain J4N44_RS15940 PF02844 Phosphoribosylglycinamide synthetase, N domain J4N44_RS15940 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J4N44_RS15940 PF02843 Phosphoribosylglycinamide synthetase, C domain J4N44_RS15950 PF00216 Bacterial DNA-binding protein J4N44_RS15955 PF00571 CBS domain J4N44_RS15955 PF01595 Cyclin M transmembrane N-terminal domain J4N44_RS15960 PF04222 Protein of unknown function (DUF416) J4N44_RS15965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N44_RS15970 PF03167 Uracil DNA glycosylase superfamily J4N44_RS15975 PF01208 Uroporphyrinogen decarboxylase (URO-D) J4N44_RS15990 PF00293 NUDIX domain J4N44_RS15990 PF09297 NADH pyrophosphatase zinc ribbon domain J4N44_RS15995 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ J4N44_RS16000 PF04983 RNA polymerase Rpb1, domain 3 J4N44_RS16000 PF00623 RNA polymerase Rpb1, domain 2 J4N44_RS16000 PF05000 RNA polymerase Rpb1, domain 4 J4N44_RS16000 PF04997 RNA polymerase Rpb1, domain 1 J4N44_RS16000 PF04998 RNA polymerase Rpb1, domain 5 J4N44_RS16005 PF04563 RNA polymerase beta subunit J4N44_RS16005 PF04561 RNA polymerase Rpb2, domain 2 J4N44_RS16005 PF10385 RNA polymerase beta subunit external 1 domain J4N44_RS16005 PF04560 RNA polymerase Rpb2, domain 7 J4N44_RS16005 PF00562 RNA polymerase Rpb2, domain 6 J4N44_RS16005 PF04565 RNA polymerase Rpb2, domain 3 J4N44_RS16010 PF16320 Ribosomal protein L7/L12 dimerisation domain J4N44_RS16010 PF00542 Ribosomal protein L7/L12 C-terminal domain J4N44_RS16015 PF00466 Ribosomal protein L10 J4N44_RS16020 PF00687 Ribosomal protein L1p/L10e family J4N44_RS16025 PF00298 Ribosomal protein L11, RNA binding domain J4N44_RS16025 PF03946 Ribosomal protein L11, N-terminal domain J4N44_RS16030 PF00467 KOW motif J4N44_RS16030 PF02357 Transcription termination factor nusG J4N44_RS16035 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J4N44_RS16065 PF00485 Phosphoribulokinase / Uridine kinase family J4N44_RS16070 PF02237 Biotin protein ligase C terminal domain J4N44_RS16070 PF08279 HTH domain J4N44_RS16070 PF03099 Biotin/lipoate A/B protein ligase family J4N44_RS16075 PF01565 FAD binding domain J4N44_RS16075 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J4N44_RS16085 PF13091 PLD-like domain J4N44_RS16155 PF01177 Asp/Glu/Hydantoin racemase J4N44_RS16165 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS16165 PF00593 TonB dependent receptor J4N44_RS16170 PF05958 tRNA (Uracil-5-)-methyltransferase J4N44_RS16180 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS16185 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS16185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N44_RS16190 PF01554 MatE J4N44_RS16200 PF01726 LexA DNA binding domain J4N44_RS16200 PF00717 Peptidase S24-like J4N44_RS16205 PF01553 Acyltransferase J4N44_RS16210 PF01040 UbiA prenyltransferase family J4N44_RS16215 PF04345 Chorismate lyase J4N44_RS16220 PF03748 Flagellar basal body-associated protein FliL J4N44_RS16225 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease J4N44_RS16225 PF01694 Rhomboid family J4N44_RS16230 PF00581 Rhodanese-like domain J4N44_RS16235 PF04545 Sigma-70, region 4 J4N44_RS16235 PF00140 Sigma-70 factor, region 1.2 J4N44_RS16235 PF04542 Sigma-70 region 2 J4N44_RS16240 PF18075 FtsX extracellular domain J4N44_RS16245 PF00005 ABC transporter J4N44_RS16250 PF02881 SRP54-type protein, helical bundle domain J4N44_RS16250 PF00448 SRP54-type protein, GTPase domain J4N44_RS16250 PF00448 SRP54-type protein, GTPase domain J4N44_RS16250 PF02881 SRP54-type protein, helical bundle domain J4N44_RS16265 PF01914 MarC family integral membrane protein J4N44_RS16285 PF10694 Protein of unknown function (DUF2500) J4N44_RS16310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N44_RS16310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N44_RS16315 PF01022 Bacterial regulatory protein, arsR family J4N44_RS16320 PF00563 EAL domain J4N44_RS16320 PF08668 HDOD domain J4N44_RS16325 PF01810 LysE type translocator J4N44_RS16330 PF12146 Serine aminopeptidase, S33 J4N44_RS16350 PF03942 DTW domain J4N44_RS16355 PF00563 EAL domain J4N44_RS16355 PF10442 FIST C domain J4N44_RS16355 PF08495 FIST N domain J4N44_RS16355 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS16360 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS16365 PF02899 Phage integrase, N-terminal SAM-like domain J4N44_RS16365 PF00589 Phage integrase family J4N44_RS16375 PF01678 Diaminopimelate epimerase J4N44_RS16380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N44_RS16380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N44_RS16390 PF01491 Frataxin-like domain J4N44_RS16395 PF12633 Adenylate cyclase NT domain J4N44_RS16395 PF01295 Adenylate cyclase, class-I J4N44_RS16400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J4N44_RS16400 PF03900 Porphobilinogen deaminase, C-terminal domain J4N44_RS16405 PF02602 Uroporphyrinogen-III synthase HemD J4N44_RS16410 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase J4N44_RS16415 PF07219 HemY protein N-terminus J4N44_RS16450 PF00175 Oxidoreductase NAD-binding domain J4N44_RS16455 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N44_RS16460 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase J4N44_RS16470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N44_RS16470 PF07498 Rho termination factor, N-terminal domain J4N44_RS16470 PF07497 Rho termination factor, RNA-binding domain J4N44_RS16475 PF00085 Thioredoxin J4N44_RS16480 PF00270 DEAD/DEAH box helicase J4N44_RS16480 PF00271 Helicase conserved C-terminal domain J4N44_RS16485 PF02541 Ppx/GppA phosphatase family J4N44_RS16490 PF02592 Putative vitamin uptake transporter J4N44_RS16500 PF16124 RecQ zinc-binding J4N44_RS16500 PF00270 DEAD/DEAH box helicase J4N44_RS16500 PF00271 Helicase conserved C-terminal domain J4N44_RS16500 PF00570 HRDC domain J4N44_RS16500 PF09382 RQC domain J4N44_RS16505 PF00892 EamA-like transporter family J4N44_RS16515 PF01810 LysE type translocator J4N44_RS16525 PF13361 UvrD-like helicase C-terminal domain J4N44_RS16525 PF00580 UvrD/REP helicase N-terminal domain J4N44_RS16535 PF05114 Protein of unknown function (DUF692) J4N44_RS16555 PF07690 Major Facilitator Superfamily J4N44_RS16560 PF03466 LysR substrate binding domain J4N44_RS16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS16565 PF00557 Metallopeptidase family M24 J4N44_RS16565 PF00557 Metallopeptidase family M24 J4N44_RS16565 PF01321 Creatinase/Prolidase N-terminal domain J4N44_RS16565 PF01321 Creatinase/Prolidase N-terminal domain J4N44_RS16570 PF06968 Biotin and Thiamin Synthesis associated domain J4N44_RS16570 PF04055 Radical SAM superfamily J4N44_RS16575 PF05690 Thiazole biosynthesis protein ThiG J4N44_RS16580 PF02597 ThiS family J4N44_RS16585 PF00899 ThiF family J4N44_RS16590 PF02581 Thiamine monophosphate synthase J4N44_RS16595 PF13667 ThiC-associated domain J4N44_RS16595 PF01964 Radical SAM ThiC family J4N44_RS16600 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J4N44_RS16605 PF07732 Multicopper oxidase J4N44_RS16605 PF00394 Multicopper oxidase J4N44_RS16605 PF07731 Multicopper oxidase J4N44_RS16645 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS16655 PF01488 Shikimate / quinate 5-dehydrogenase J4N44_RS16655 PF08501 Shikimate dehydrogenase substrate binding domain J4N44_RS16655 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J4N44_RS16660 PF01218 Coproporphyrinogen III oxidase J4N44_RS16665 PF01300 Telomere recombination J4N44_RS16670 PF00731 AIR carboxylase J4N44_RS16675 PF02222 ATP-grasp domain J4N44_RS16675 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J4N44_RS16680 PF01396 Topoisomerase DNA binding C4 zinc finger J4N44_RS16685 PF04361 Protein of unknown function (DUF494) J4N44_RS16690 PF17782 DprA winged helix domain J4N44_RS16690 PF02481 DNA recombination-mediator protein A J4N44_RS16700 PF01327 Polypeptide deformylase J4N44_RS16705 PF02911 Formyl transferase, C-terminal domain J4N44_RS16705 PF00551 Formyl transferase J4N44_RS16710 PF01029 NusB family J4N44_RS16710 PF01189 16S rRNA methyltransferase RsmB/F J4N44_RS16715 PF02254 TrkA-N domain J4N44_RS16715 PF02080 TrkA-C domain J4N44_RS16720 PF02386 Cation transport protein J4N44_RS16730 PF03006 Haemolysin-III related J4N44_RS16735 PF07070 SpoOM protein J4N44_RS16745 PF06288 Protein of unknown function (DUF1040) J4N44_RS16750 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J4N44_RS16750 PF13746 4Fe-4S dicluster domain J4N44_RS16750 PF12801 4Fe-4S binding domain J4N44_RS16755 PF01636 Phosphotransferase enzyme family J4N44_RS16760 PF01323 DSBA-like thioredoxin domain J4N44_RS16765 PF01553 Acyltransferase J4N44_RS16775 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS16775 PF08448 PAS fold J4N44_RS16810 PF17782 DprA winged helix domain J4N44_RS16810 PF02481 DNA recombination-mediator protein A J4N44_RS16820 PF00239 Resolvase, N terminal domain J4N44_RS16820 PF02796 Helix-turn-helix domain of resolvase J4N44_RS16835 PF07508 Recombinase J4N44_RS16835 PF00239 Resolvase, N terminal domain J4N44_RS16835 PF13408 Recombinase zinc beta ribbon domain J4N44_RS16845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N44_RS16845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N44_RS16845 PF00205 Thiamine pyrophosphate enzyme, central domain J4N44_RS16855 PF01063 Amino-transferase class IV J4N44_RS16860 PF00920 Dehydratase family J4N44_RS16865 PF00291 Pyridoxal-phosphate dependent enzyme J4N44_RS16865 PF00585 C-terminal regulatory domain of Threonine dehydratase J4N44_RS16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS16870 PF03466 LysR substrate binding domain J4N44_RS16875 PF07690 Major Facilitator Superfamily J4N44_RS16880 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS16885 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS16890 PF12804 MobA-like NTP transferase domain J4N44_RS16890 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS16895 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4N44_RS16895 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4N44_RS16900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N44_RS16900 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N44_RS16905 PF00231 ATP synthase J4N44_RS16910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N44_RS16910 PF00306 ATP synthase alpha/beta chain, C terminal domain J4N44_RS16910 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N44_RS16915 PF00213 ATP synthase delta (OSCP) subunit J4N44_RS16920 PF00430 ATP synthase B/B' CF(0) J4N44_RS16925 PF00137 ATP synthase subunit C J4N44_RS16930 PF00119 ATP synthase A chain J4N44_RS16935 PF03899 ATP synthase I chain J4N44_RS16940 PF17762 HTH domain found in ParB protein J4N44_RS16940 PF02195 ParB-like nuclease domain J4N44_RS16945 PF13614 AAA domain J4N44_RS16950 PF02527 rRNA small subunit methyltransferase G J4N44_RS16955 PF01134 Glucose inhibited division protein A J4N44_RS16955 PF13932 GidA associated domain J4N44_RS16960 PF00258 Flavodoxin J4N44_RS16965 PF01926 50S ribosome-binding GTPase J4N44_RS16965 PF12631 MnmE helical domain J4N44_RS16965 PF10396 GTP-binding protein TrmE N-terminus J4N44_RS16970 PF02096 60Kd inner membrane protein J4N44_RS16970 PF14849 YidC periplasmic domain J4N44_RS16975 PF01809 Putative membrane protein insertion efficiency factor J4N44_RS16980 PF00825 Ribonuclease P J4N44_RS16985 PF00468 Ribosomal protein L34 J4N44_RS16990 PF00005 ABC transporter J4N44_RS16995 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS17000 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS17005 PF18607 ParA helix turn helix domain J4N44_RS17005 PF13614 AAA domain J4N44_RS17010 PF08775 ParB family J4N44_RS17010 PF02195 ParB-like nuclease domain J4N44_RS17015 PF13718 GNAT acetyltransferase 2 J4N44_RS17015 PF05127 Helicase J4N44_RS17020 PF03544 Gram-negative bacterial TonB protein C-terminal J4N44_RS17025 PF02472 Biopolymer transport protein ExbD/TolR J4N44_RS17030 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS17065 PF08281 Sigma-70, region 4 J4N44_RS17065 PF04542 Sigma-70 region 2 J4N44_RS17075 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS17080 PF03466 LysR substrate binding domain J4N44_RS17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS17090 PF00246 Zinc carboxypeptidase J4N44_RS17095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS17100 PF03358 NADPH-dependent FMN reductase J4N44_RS17110 PF03412 Peptidase C39 family J4N44_RS17110 PF00664 ABC transporter transmembrane region J4N44_RS17110 PF00005 ABC transporter J4N44_RS17125 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS17130 PF00072 Response regulator receiver domain J4N44_RS17130 PF02954 Bacterial regulatory protein, Fis family J4N44_RS17130 PF00158 Sigma-54 interaction domain J4N44_RS17135 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS17135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS17135 PF02743 Cache domain J4N44_RS17140 PF01243 Pyridoxamine 5'-phosphate oxidase J4N44_RS17140 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J4N44_RS17150 PF12833 Helix-turn-helix domain J4N44_RS17155 PF00171 Aldehyde dehydrogenase family J4N44_RS17155 PF01619 Proline dehydrogenase J4N44_RS17155 PF14850 DNA-binding domain of Proline dehydrogenase J4N44_RS17155 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J4N44_RS17165 PF00474 Sodium:solute symporter family J4N44_RS17210 PF01037 Lrp/AsnC ligand binding domain J4N44_RS17220 PF00005 ABC transporter J4N44_RS17220 PF00664 ABC transporter transmembrane region J4N44_RS17240 PF10688 Bacterial inner membrane protein J4N44_RS17245 PF01081 KDPG and KHG aldolase J4N44_RS17250 PF00294 pfkB family carbohydrate kinase J4N44_RS17255 PF02614 Glucuronate isomerase J4N44_RS17260 PF01232 Mannitol dehydrogenase Rossmann domain J4N44_RS17260 PF08125 Mannitol dehydrogenase C-terminal domain J4N44_RS17265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N44_RS17270 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N44_RS17275 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N44_RS17280 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS17280 PF07729 FCD domain J4N44_RS17285 PF03786 D-mannonate dehydratase (UxuA) J4N44_RS17290 PF13443 Cro/C1-type HTH DNA-binding domain J4N44_RS17305 PF00155 Aminotransferase class I and II J4N44_RS17310 PF04542 Sigma-70 region 2 J4N44_RS17310 PF08281 Sigma-70, region 4 J4N44_RS17320 PF00270 DEAD/DEAH box helicase J4N44_RS17320 PF00271 Helicase conserved C-terminal domain J4N44_RS17325 PF06629 MltA-interacting protein MipA J4N44_RS17335 PF13673 Acetyltransferase (GNAT) domain J4N44_RS17340 PF03473 MOSC domain J4N44_RS17340 PF03475 3-alpha domain J4N44_RS17355 PF13404 AsnC-type helix-turn-helix domain J4N44_RS17355 PF01037 Lrp/AsnC ligand binding domain J4N44_RS17360 PF01810 LysE type translocator J4N44_RS17370 PF02743 Cache domain J4N44_RS17370 PF00672 HAMP domain J4N44_RS17370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS17375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS17410 PF01547 Bacterial extracellular solute-binding protein J4N44_RS17415 PF00128 Alpha amylase, catalytic domain J4N44_RS17415 PF02903 Alpha amylase, N-terminal ig-like domain J4N44_RS17415 PF16657 Maltogenic Amylase, C-terminal domain J4N44_RS17420 PF00128 Alpha amylase, catalytic domain J4N44_RS17420 PF16657 Maltogenic Amylase, C-terminal domain J4N44_RS17425 PF03466 LysR substrate binding domain J4N44_RS17425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS17455 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS17455 PF07729 FCD domain J4N44_RS17460 PF05035 2-keto-3-deoxy-galactonokinase J4N44_RS17465 PF01081 KDPG and KHG aldolase J4N44_RS17470 PF03480 Bacterial extracellular solute-binding protein, family 7 J4N44_RS17475 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N44_RS17475 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N44_RS17480 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J4N44_RS17480 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J4N44_RS17485 PF13378 Enolase C-terminal domain-like J4N44_RS17485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4N44_RS17490 PF00920 Dehydratase family J4N44_RS17495 PF00701 Dihydrodipicolinate synthetase family J4N44_RS17500 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS17500 PF13192 Thioredoxin domain J4N44_RS17505 PF10417 C-terminal domain of 1-Cys peroxiredoxin J4N44_RS17505 PF00578 AhpC/TSA family J4N44_RS17515 PF01047 MarR family J4N44_RS17520 PF02566 OsmC-like protein J4N44_RS17535 PF17200 Single Cache domain 2 J4N44_RS17535 PF00672 HAMP domain J4N44_RS17535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS17540 PF05193 Peptidase M16 inactive domain J4N44_RS17540 PF00675 Insulinase (Peptidase family M16) J4N44_RS17565 PF04225 Opacity-associated protein A LysM-like domain J4N44_RS17565 PF01551 Peptidase family M23 J4N44_RS17575 PF13533 Biotin-lipoyl like J4N44_RS17585 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS17585 PF08360 QacR-like protein, C-terminal region J4N44_RS17590 PF00005 ABC transporter J4N44_RS17595 PF01032 FecCD transport family J4N44_RS17600 PF01032 FecCD transport family J4N44_RS17605 PF01497 Periplasmic binding protein J4N44_RS17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS17610 PF03466 LysR substrate binding domain J4N44_RS17615 PF00593 TonB dependent receptor J4N44_RS17615 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS17620 PF00892 EamA-like transporter family J4N44_RS17635 PF07690 Major Facilitator Superfamily J4N44_RS17645 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS17660 PF07690 Major Facilitator Superfamily J4N44_RS17665 PF00474 Sodium:solute symporter family J4N44_RS17670 PF03315 Serine dehydratase beta chain J4N44_RS17670 PF03313 Serine dehydratase alpha chain J4N44_RS17685 PF13187 4Fe-4S dicluster domain J4N44_RS17685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N44_RS17685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N44_RS17690 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B J4N44_RS17690 PF00175 Oxidoreductase NAD-binding domain J4N44_RS17695 PF17179 4Fe-4S dicluster domain J4N44_RS17700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N44_RS17700 PF10414 Sirohaem synthase dimerisation region J4N44_RS17700 PF14824 Sirohaem biosynthesis protein central J4N44_RS17710 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS17715 PF00128 Alpha amylase, catalytic domain J4N44_RS17715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N44_RS17720 PF02264 LamB porin J4N44_RS17735 PF00128 Alpha amylase, catalytic domain J4N44_RS17735 PF02903 Alpha amylase, N-terminal ig-like domain J4N44_RS17740 PF04231 Endonuclease I J4N44_RS17745 PF00155 Aminotransferase class I and II J4N44_RS17745 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS17790 PF00583 Acetyltransferase (GNAT) family J4N44_RS17820 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N44_RS17825 PF01568 Molydopterin dinucleotide binding domain J4N44_RS17825 PF18364 Molybdopterin oxidoreductase N-terminal domain J4N44_RS17825 PF00384 Molybdopterin oxidoreductase J4N44_RS17830 PF01569 PAP2 superfamily J4N44_RS17835 PF02581 Thiamine monophosphate synthase J4N44_RS17840 PF02110 Hydroxyethylthiazole kinase family J4N44_RS17845 PF03070 TENA/THI-4/PQQC family J4N44_RS17850 PF09084 NMT1/THI5 like J4N44_RS17855 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS17860 PF00005 ABC transporter J4N44_RS17865 PF08543 Phosphomethylpyrimidine kinase J4N44_RS17870 PF01523 Putative modulator of DNA gyrase J4N44_RS17875 PF01523 Putative modulator of DNA gyrase J4N44_RS17880 PF04013 Putative SAM-dependent RNA methyltransferase J4N44_RS17930 PF10928 Protein of unknown function (DUF2810) J4N44_RS17935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J4N44_RS17935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J4N44_RS17945 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N44_RS17950 PF00056 lactate/malate dehydrogenase, NAD binding domain J4N44_RS17950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J4N44_RS17955 PF00072 Response regulator receiver domain J4N44_RS17955 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS17960 PF16750 Sensor domain of 2-component histidine kinase J4N44_RS17960 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS17960 PF00672 HAMP domain J4N44_RS17965 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS17965 PF00593 TonB dependent receptor J4N44_RS17975 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS17980 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS17985 PF02472 Biopolymer transport protein ExbD/TolR J4N44_RS18030 PF01297 Zinc-uptake complex component A periplasmic J4N44_RS18035 PF00005 ABC transporter J4N44_RS18040 PF00950 ABC 3 transport family J4N44_RS18055 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N44_RS18055 PF00326 Prolyl oligopeptidase family J4N44_RS18060 PF07690 Major Facilitator Superfamily J4N44_RS18065 PF00491 Arginase family J4N44_RS18070 PF17810 Arginine decarboxylase helical bundle domain J4N44_RS18070 PF17944 Arginine decarboxylase C-terminal helical extension J4N44_RS18070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N44_RS18075 PF00753 Metallo-beta-lactamase superfamily J4N44_RS18080 PF18030 RimK PreATP-grasp domain J4N44_RS18080 PF08443 RimK-like ATP-grasp domain J4N44_RS18085 PF08443 RimK-like ATP-grasp domain J4N44_RS18085 PF18030 RimK PreATP-grasp domain J4N44_RS18095 PF12706 Beta-lactamase superfamily domain J4N44_RS18105 PF03466 LysR substrate binding domain J4N44_RS18105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS18130 PF00232 Glycosyl hydrolase family 1 J4N44_RS18135 PF02743 Cache domain J4N44_RS18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS18135 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS18140 PF00158 Sigma-54 interaction domain J4N44_RS18140 PF00072 Response regulator receiver domain J4N44_RS18140 PF02954 Bacterial regulatory protein, Fis family J4N44_RS18145 PF05525 Branched-chain amino acid transport protein J4N44_RS18160 PF01266 FAD dependent oxidoreductase J4N44_RS18165 PF00182 Chitinase class I J4N44_RS18180 PF03116 NQR2, RnfD, RnfE family J4N44_RS18185 PF01212 Beta-eliminating lyase J4N44_RS18200 PF07670 Nucleoside recognition J4N44_RS18200 PF07662 Na+ dependent nucleoside transporter C-terminus J4N44_RS18200 PF01773 Na+ dependent nucleoside transporter N-terminus J4N44_RS18205 PF00483 Nucleotidyl transferase J4N44_RS18225 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS18225 PF05230 MASE2 domain J4N44_RS18240 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS18245 PF03441 FAD binding domain of DNA photolyase J4N44_RS18245 PF00875 DNA photolyase J4N44_RS18250 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J4N44_RS18265 PF01641 SelR domain J4N44_RS18265 PF01625 Peptide methionine sulfoxide reductase J4N44_RS18270 PF02566 OsmC-like protein J4N44_RS18275 PF12464 Maltose acetyltransferase J4N44_RS18275 PF14602 Hexapeptide repeat of succinyl-transferase J4N44_RS18315 PF03466 LysR substrate binding domain J4N44_RS18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS18320 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS18355 PF00657 GDSL-like Lipase/Acylhydrolase J4N44_RS18360 PF00082 Subtilase family J4N44_RS18360 PF05922 Peptidase inhibitor I9 J4N44_RS18370 PF03611 PTS system sugar-specific permease component J4N44_RS18380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS18385 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS18390 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS18395 PF00202 Aminotransferase class-III J4N44_RS18400 PF00266 Aminotransferase class-V J4N44_RS18410 PF00005 ABC transporter J4N44_RS18415 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS18420 PF07702 UTRA domain J4N44_RS18420 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS18435 PF04393 Protein of unknown function (DUF535) J4N44_RS18445 PF01266 FAD dependent oxidoreductase J4N44_RS18450 PF18027 Cytosolic carboxypeptidase N-terminal domain J4N44_RS18450 PF00246 Zinc carboxypeptidase J4N44_RS18455 PF01389 OmpA-like transmembrane domain J4N44_RS18455 PF00691 OmpA family J4N44_RS18460 PF03466 LysR substrate binding domain J4N44_RS18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS18470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS18470 PF03466 LysR substrate binding domain J4N44_RS18480 PF01566 Natural resistance-associated macrophage protein J4N44_RS18485 PF00854 POT family J4N44_RS18490 PF03313 Serine dehydratase alpha chain J4N44_RS18490 PF03315 Serine dehydratase beta chain J4N44_RS18515 PF01464 Transglycosylase SLT domain J4N44_RS18515 PF01476 LysM domain J4N44_RS18535 PF00460 Flagella basal body rod protein J4N44_RS18540 PF00460 Flagella basal body rod protein J4N44_RS18540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS18545 PF03963 Flagellar hook capping protein - N-terminal region J4N44_RS18545 PF13860 FlgD Ig-like domain J4N44_RS18545 PF13861 FlgD Tudor-like domain J4N44_RS18550 PF07559 Flagellar basal body protein FlaE J4N44_RS18550 PF00460 Flagella basal body rod protein J4N44_RS18550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS18555 PF00460 Flagella basal body rod protein J4N44_RS18555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS18560 PF00460 Flagella basal body rod protein J4N44_RS18560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS18565 PF02107 Flagellar L-ring protein J4N44_RS18570 PF02119 Flagellar P-ring protein J4N44_RS18575 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase J4N44_RS18575 PF10135 Rod binding protein J4N44_RS18580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J4N44_RS18580 PF00460 Flagella basal body rod protein J4N44_RS18585 PF00669 Bacterial flagellin N-terminal helical region J4N44_RS18605 PF01070 FMN-dependent dehydrogenase J4N44_RS18620 PF08241 Methyltransferase domain J4N44_RS18640 PF03239 Iron permease FTR1 family J4N44_RS18645 PF10634 Fe2+ transport protein J4N44_RS18655 PF02687 FtsX-like permease family J4N44_RS18655 PF12704 MacB-like periplasmic core domain J4N44_RS18655 PF00005 ABC transporter J4N44_RS18665 PF00005 ABC transporter J4N44_RS18670 PF00578 AhpC/TSA family J4N44_RS18680 PF04205 FMN-binding domain J4N44_RS18695 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS18705 PF08000 Bacterial PH domain J4N44_RS18730 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N44_RS18730 PF00691 OmpA family J4N44_RS18735 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS18740 PF04545 Sigma-70, region 4 J4N44_RS18740 PF04542 Sigma-70 region 2 J4N44_RS18745 PF03748 Flagellar basal body-associated protein FliL J4N44_RS18760 PF02561 Flagellar protein FliS J4N44_RS18765 PF07196 Flagellin hook IN motif J4N44_RS18765 PF02465 Flagellar hook-associated protein 2 N-terminus J4N44_RS18765 PF07195 Flagellar hook-associated protein 2 C-terminus J4N44_RS18775 PF00700 Bacterial flagellin C-terminal helical region J4N44_RS18775 PF00669 Bacterial flagellin N-terminal helical region J4N44_RS18785 PF00771 FHIPEP family J4N44_RS18790 PF01312 FlhB HrpN YscU SpaS Family J4N44_RS18795 PF01311 Bacterial export proteins, family 1 J4N44_RS18800 PF01313 Bacterial export proteins, family 3 J4N44_RS18805 PF00813 FliP family J4N44_RS18810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J4N44_RS18830 PF00072 Response regulator receiver domain J4N44_RS18830 PF00158 Sigma-54 interaction domain J4N44_RS18830 PF02954 Bacterial regulatory protein, Fis family J4N44_RS18835 PF02049 Flagellar hook-basal body complex protein FliE J4N44_RS18840 PF08345 Flagellar M-ring protein C-terminal J4N44_RS18840 PF01514 Secretory protein of YscJ/FliF family J4N44_RS18845 PF14842 FliG N-terminal domain J4N44_RS18845 PF14841 FliG middle domain J4N44_RS18845 PF01706 FliG C-terminal domain J4N44_RS18855 PF18269 T3SS EscN ATPase C-terminal domain J4N44_RS18855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N44_RS18865 PF05231 MASE1 J4N44_RS18865 PF00563 EAL domain J4N44_RS18875 PF03466 LysR substrate binding domain J4N44_RS18875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS18885 PF00419 Fimbrial protein J4N44_RS18890 PF02753 Pili assembly chaperone PapD, C-terminal domain J4N44_RS18890 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain J4N44_RS18895 PF13953 PapC C-terminal domain J4N44_RS18895 PF00577 Outer membrane usher protein J4N44_RS18895 PF13954 PapC N-terminal domain J4N44_RS18950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS18955 PF03466 LysR substrate binding domain J4N44_RS18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS18975 PF00072 Response regulator receiver domain J4N44_RS18975 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS18980 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS18980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS18980 PF08448 PAS fold J4N44_RS18980 PF13426 PAS domain J4N44_RS18980 PF00072 Response regulator receiver domain J4N44_RS18985 PF00266 Aminotransferase class-V J4N44_RS18990 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS18995 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS18995 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS18995 PF00563 EAL domain J4N44_RS19000 PF00155 Aminotransferase class I and II J4N44_RS19005 PF08240 Alcohol dehydrogenase GroES-like domain J4N44_RS19005 PF00107 Zinc-binding dehydrogenase J4N44_RS19015 PF00293 NUDIX domain J4N44_RS19025 PF00194 Eukaryotic-type carbonic anhydrase J4N44_RS19030 PF09278 MerR, DNA binding J4N44_RS19030 PF00376 MerR family regulatory protein J4N44_RS19060 PF13091 PLD-like domain J4N44_RS19065 PF13533 Biotin-lipoyl like J4N44_RS19070 PF00873 AcrB/AcrD/AcrF family J4N44_RS19080 PF00873 AcrB/AcrD/AcrF family J4N44_RS19105 PF08218 Citrate lyase ligase C-terminal domain J4N44_RS19115 PF00501 AMP-binding enzyme J4N44_RS19115 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS19120 PF02028 BCCT, betaine/carnitine/choline family transporter J4N44_RS19125 PF02837 Glycosyl hydrolases family 2, sugar binding domain J4N44_RS19125 PF02836 Glycosyl hydrolases family 2, TIM barrel domain J4N44_RS19125 PF00703 Glycosyl hydrolases family 2 J4N44_RS19125 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 J4N44_RS19130 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS19140 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS19140 PF00563 EAL domain J4N44_RS19140 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS19150 PF03616 Sodium/glutamate symporter J4N44_RS19155 PF02600 Disulfide bond formation protein DsbB J4N44_RS19165 PF02321 Outer membrane efflux protein J4N44_RS19170 PF00873 AcrB/AcrD/AcrF family J4N44_RS19175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19180 PF03466 LysR substrate binding domain J4N44_RS19195 PF00579 tRNA synthetases class I (W and Y) J4N44_RS19200 PF00072 Response regulator receiver domain J4N44_RS19200 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS19210 PF00391 PEP-utilising enzyme, mobile domain J4N44_RS19210 PF02896 PEP-utilising enzyme, TIM barrel domain J4N44_RS19210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J4N44_RS19215 PF03618 Kinase/pyrophosphorylase J4N44_RS19220 PF00710 Asparaginase, N-terminal J4N44_RS19220 PF17763 Glutaminase/Asparaginase C-terminal domain J4N44_RS19225 PF13185 GAF domain J4N44_RS19225 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS19225 PF00563 EAL domain J4N44_RS19230 PF00709 Adenylosuccinate synthetase J4N44_RS19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19235 PF03466 LysR substrate binding domain J4N44_RS19255 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) J4N44_RS19270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N44_RS19280 PF07690 Major Facilitator Superfamily J4N44_RS19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19290 PF03466 LysR substrate binding domain J4N44_RS19310 PF03466 LysR substrate binding domain J4N44_RS19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19320 PF00271 Helicase conserved C-terminal domain J4N44_RS19320 PF00270 DEAD/DEAH box helicase J4N44_RS19330 PF00535 Glycosyl transferase family 2 J4N44_RS19340 PF03099 Biotin/lipoate A/B protein ligase family J4N44_RS19360 PF00155 Aminotransferase class I and II J4N44_RS19365 PF01497 Periplasmic binding protein J4N44_RS19365 PF12833 Helix-turn-helix domain J4N44_RS19370 PF03466 LysR substrate binding domain J4N44_RS19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19380 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS19385 PF00158 Sigma-54 interaction domain J4N44_RS19385 PF01590 GAF domain J4N44_RS19390 PF00301 Rubredoxin J4N44_RS19390 PF00258 Flavodoxin J4N44_RS19390 PF00753 Metallo-beta-lactamase superfamily J4N44_RS19395 PF18113 Rubredoxin binding C-terminal domain J4N44_RS19395 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS19410 PF11742 Protein of unknown function (DUF3302) J4N44_RS19415 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS19415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS19420 PF03466 LysR substrate binding domain J4N44_RS19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19430 PF01238 Phosphomannose isomerase type I J4N44_RS19435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS19435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS19440 PF12833 Helix-turn-helix domain J4N44_RS19450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS19460 PF03466 LysR substrate binding domain J4N44_RS19460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N44_RS19470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N44_RS19475 PF06628 Catalase-related immune-responsive J4N44_RS19475 PF00199 Catalase J4N44_RS19485 PF16884 N-terminal domain of oxidoreductase J4N44_RS19485 PF00107 Zinc-binding dehydrogenase J4N44_RS19490 PF16925 Tetracyclin repressor-like, C-terminal domain J4N44_RS19490 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS19495 PF04266 ASCH domain J4N44_RS19525 PF13439 Glycosyltransferase Family 4 J4N44_RS19525 PF00534 Glycosyl transferases group 1 J4N44_RS19535 PF13807 G-rich domain on putative tyrosine kinase J4N44_RS19535 PF02706 Chain length determinant protein J4N44_RS19535 PF13614 AAA domain J4N44_RS19550 PF02397 Bacterial sugar transferase J4N44_RS19555 PF08402 TOBE domain J4N44_RS19555 PF00005 ABC transporter J4N44_RS19560 PF01547 Bacterial extracellular solute-binding protein J4N44_RS19565 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS19565 PF14785 Maltose transport system permease protein MalF P2 domain J4N44_RS19570 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS19615 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain J4N44_RS19615 PF01464 Transglycosylase SLT domain J4N44_RS19630 PF12833 Helix-turn-helix domain J4N44_RS19630 PF00072 Response regulator receiver domain J4N44_RS19640 PF05661 Protein of unknown function (DUF808) J4N44_RS19645 PF01979 Amidohydrolase family J4N44_RS19650 PF01679 Proteolipid membrane potential modulator J4N44_RS19655 PF03476 MOSC N-terminal beta barrel domain J4N44_RS19655 PF03473 MOSC domain J4N44_RS19655 PF03473 MOSC domain J4N44_RS19655 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N44_RS19655 PF03476 MOSC N-terminal beta barrel domain J4N44_RS19655 PF00111 2Fe-2S iron-sulfur cluster binding domain J4N44_RS19660 PF02540 NAD synthase J4N44_RS19665 PF01467 Cytidylyltransferase-like J4N44_RS19705 PF03466 LysR substrate binding domain J4N44_RS19705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19735 PF00857 Isochorismatase family J4N44_RS19740 PF01965 DJ-1/PfpI family J4N44_RS19740 PF12833 Helix-turn-helix domain J4N44_RS19745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N44_RS19755 PF08019 Phosphoethanolamine transferase EptA/EptB J4N44_RS19755 PF00884 Sulfatase J4N44_RS19760 PF01219 Prokaryotic diacylglycerol kinase J4N44_RS19770 PF00672 HAMP domain J4N44_RS19770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS19770 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS19775 PF00072 Response regulator receiver domain J4N44_RS19775 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS19780 PF02028 BCCT, betaine/carnitine/choline family transporter J4N44_RS19785 PF13378 Enolase C-terminal domain-like J4N44_RS19785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4N44_RS19790 PF04205 FMN-binding domain J4N44_RS19790 PF00890 FAD binding domain J4N44_RS19795 PF07729 FCD domain J4N44_RS19795 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS19800 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS19800 PF00114 Pilin (bacterial filament) J4N44_RS19805 PF00106 short chain dehydrogenase J4N44_RS19820 PF01323 DSBA-like thioredoxin domain J4N44_RS19835 PF00255 Glutathione peroxidase J4N44_RS19840 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J4N44_RS19850 PF07690 Major Facilitator Superfamily J4N44_RS19865 PF01966 HD domain J4N44_RS19880 PF07969 Amidohydrolase family J4N44_RS19885 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin J4N44_RS19890 PF03448 MgtE intracellular N domain J4N44_RS19890 PF00571 CBS domain J4N44_RS19890 PF01769 Divalent cation transporter J4N44_RS19895 PF03109 ABC1 family J4N44_RS19900 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS19900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS19925 PF00072 Response regulator receiver domain J4N44_RS19925 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS19930 PF16527 Two-component sensor protein CpxA, periplasmic domain J4N44_RS19930 PF00672 HAMP domain J4N44_RS19930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS19930 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS19940 PF00155 Aminotransferase class I and II J4N44_RS19940 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS19945 PF13520 Amino acid permease J4N44_RS19950 PF13404 AsnC-type helix-turn-helix domain J4N44_RS19950 PF01037 Lrp/AsnC ligand binding domain J4N44_RS19960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS19960 PF03466 LysR substrate binding domain J4N44_RS19975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J4N44_RS19975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J4N44_RS19980 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS19980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J4N44_RS19980 PF01627 Hpt domain J4N44_RS19980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS19980 PF00072 Response regulator receiver domain J4N44_RS19980 PF00672 HAMP domain J4N44_RS19985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N44_RS19990 PF01554 MatE J4N44_RS19995 PF04363 Protein of unknown function (DUF496) J4N44_RS20005 PF04337 Protein of unknown function, DUF480 J4N44_RS20010 PF01541 GIY-YIG catalytic domain J4N44_RS20015 PF13407 Periplasmic binding protein domain J4N44_RS20020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS20020 PF00072 Response regulator receiver domain J4N44_RS20020 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS20020 PF09308 LuxQ, periplasmic J4N44_RS20035 PF01037 Lrp/AsnC ligand binding domain J4N44_RS20060 PF07549 SecD/SecF GG Motif J4N44_RS20060 PF02355 Protein export membrane protein J4N44_RS20060 PF13721 SecD export protein N-terminal TM region J4N44_RS20065 PF02355 Protein export membrane protein J4N44_RS20065 PF07549 SecD/SecF GG Motif J4N44_RS20075 PF01810 LysE type translocator J4N44_RS20080 PF00106 short chain dehydrogenase J4N44_RS20085 PF02803 Thiolase, C-terminal domain J4N44_RS20085 PF00108 Thiolase, N-terminal domain J4N44_RS20095 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J4N44_RS20095 PF00561 alpha/beta hydrolase fold J4N44_RS20105 PF03264 NapC/NirT cytochrome c family, N-terminal region J4N44_RS20110 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) J4N44_RS20115 PF01568 Molydopterin dinucleotide binding domain J4N44_RS20115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N44_RS20115 PF00384 Molybdopterin oxidoreductase J4N44_RS20125 PF13187 4Fe-4S dicluster domain J4N44_RS20125 PF12838 4Fe-4S dicluster domain J4N44_RS20130 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term J4N44_RS20130 PF00672 HAMP domain J4N44_RS20130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS20130 PF07730 Histidine kinase J4N44_RS20135 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS20135 PF00072 Response regulator receiver domain J4N44_RS20150 PF07687 Peptidase dimerisation domain J4N44_RS20150 PF01546 Peptidase family M20/M25/M40 J4N44_RS20155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N44_RS20160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS20165 PF00873 AcrB/AcrD/AcrF family J4N44_RS20170 PF12729 Four helix bundle sensory module for signal transduction J4N44_RS20170 PF00672 HAMP domain J4N44_RS20170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS20175 PF00472 RF-1 domain J4N44_RS20180 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS20185 PF00072 Response regulator receiver domain J4N44_RS20185 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS20210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J4N44_RS20210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N44_RS20220 PF13488 Glycine zipper J4N44_RS20220 PF00691 OmpA family J4N44_RS20240 PF00313 'Cold-shock' DNA-binding domain J4N44_RS20245 PF03889 Alternative ribosome-rescue factor A J4N44_RS20255 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS20270 PF12704 MacB-like periplasmic core domain J4N44_RS20270 PF00005 ABC transporter J4N44_RS20270 PF02687 FtsX-like permease family J4N44_RS20275 PF00005 ABC transporter J4N44_RS20275 PF02687 FtsX-like permease family J4N44_RS20275 PF12704 MacB-like periplasmic core domain J4N44_RS20285 PF04542 Sigma-70 region 2 J4N44_RS20285 PF04545 Sigma-70, region 4 J4N44_RS20285 PF04539 Sigma-70 region 3 J4N44_RS20285 PF00140 Sigma-70 factor, region 1.2 J4N44_RS20295 PF00005 ABC transporter J4N44_RS20300 PF00005 ABC transporter J4N44_RS20300 PF00664 ABC transporter transmembrane region J4N44_RS20305 PF02321 Outer membrane efflux protein J4N44_RS20310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS20310 PF00072 Response regulator receiver domain J4N44_RS20315 PF13533 Biotin-lipoyl like J4N44_RS20335 PF00672 HAMP domain J4N44_RS20335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS20335 PF17200 Single Cache domain 2 J4N44_RS20340 PF00210 Ferritin-like domain J4N44_RS20350 PF02016 LD-carboxypeptidase N-terminal domain J4N44_RS20350 PF17676 LD-carboxypeptidase C-terminal domain J4N44_RS20355 PF07995 Glucose / Sorbosone dehydrogenase J4N44_RS20360 PF00465 Iron-containing alcohol dehydrogenase J4N44_RS20375 PF00892 EamA-like transporter family J4N44_RS20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS20385 PF03466 LysR substrate binding domain J4N44_RS20395 PF13193 AMP-binding enzyme C-terminal domain J4N44_RS20395 PF00501 AMP-binding enzyme J4N44_RS20400 PF00351 Biopterin-dependent aromatic amino acid hydroxylase J4N44_RS20405 PF01329 Pterin 4 alpha carbinolamine dehydratase J4N44_RS20430 PF12843 Putative quorum-sensing-regulated virulence factor J4N44_RS20465 PF12805 FUSC-like inner membrane protein yccS J4N44_RS20470 PF13361 UvrD-like helicase C-terminal domain J4N44_RS20470 PF00580 UvrD/REP helicase N-terminal domain J4N44_RS20470 PF12462 DNA helicase IV / RNA helicase N terminal J4N44_RS20475 PF02142 MGS-like domain J4N44_RS20480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N44_RS20485 PF00072 Response regulator receiver domain J4N44_RS20485 PF01627 Hpt domain J4N44_RS20485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS20485 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS20485 PF00672 HAMP domain J4N44_RS20505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS20505 PF16750 Sensor domain of 2-component histidine kinase J4N44_RS20505 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS20505 PF00672 HAMP domain J4N44_RS20510 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS20510 PF00072 Response regulator receiver domain J4N44_RS20515 PF00884 Sulfatase J4N44_RS20520 PF00884 Sulfatase J4N44_RS20530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS20530 PF03466 LysR substrate binding domain J4N44_RS20535 PF00884 Sulfatase J4N44_RS20540 PF13186 Iron-sulfur cluster-binding domain J4N44_RS20540 PF04055 Radical SAM superfamily J4N44_RS20545 PF07726 ATPase family associated with various cellular activities (AAA) J4N44_RS20545 PF17863 AAA lid domain J4N44_RS20560 PF00092 von Willebrand factor type A domain J4N44_RS20580 PF00119 ATP synthase A chain J4N44_RS20585 PF00137 ATP synthase subunit C J4N44_RS20590 PF00430 ATP synthase B/B' CF(0) J4N44_RS20595 PF00213 ATP synthase delta (OSCP) subunit J4N44_RS20600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N44_RS20600 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N44_RS20600 PF00306 ATP synthase alpha/beta chain, C terminal domain J4N44_RS20605 PF00231 ATP synthase J4N44_RS20610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J4N44_RS20610 PF02874 ATP synthase alpha/beta family, beta-barrel domain J4N44_RS20615 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain J4N44_RS20615 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J4N44_RS20620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J4N44_RS20620 PF01872 RibD C-terminal domain J4N44_RS20625 PF03466 LysR substrate binding domain J4N44_RS20625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS20630 PF00781 Diacylglycerol kinase catalytic domain J4N44_RS20635 PF04076 Bacterial OB fold (BOF) protein J4N44_RS20650 PF03781 Sulfatase-modifying factor enzyme 1 J4N44_RS20655 PF13186 Iron-sulfur cluster-binding domain J4N44_RS20655 PF04055 Radical SAM superfamily J4N44_RS20665 PF08774 VRR-NUC domain J4N44_RS20665 PF18081 Fanconi anemia-associated nuclease SAP domain J4N44_RS20680 PF01435 Peptidase family M48 J4N44_RS20685 PF04011 LemA family J4N44_RS20690 PF03606 C4-dicarboxylate anaerobic carrier J4N44_RS20710 PF00072 Response regulator receiver domain J4N44_RS20710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS20715 PF00155 Aminotransferase class I and II J4N44_RS20720 PF01926 50S ribosome-binding GTPase J4N44_RS20725 PF01476 LysM domain J4N44_RS20725 PF08525 Opacity-associated protein A N-terminal motif J4N44_RS20725 PF01551 Peptidase family M23 J4N44_RS20745 PF00691 OmpA family J4N44_RS20750 PF02954 Bacterial regulatory protein, Fis family J4N44_RS20750 PF00072 Response regulator receiver domain J4N44_RS20750 PF00158 Sigma-54 interaction domain J4N44_RS20755 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS20755 PF17871 AAA lid domain J4N44_RS20755 PF07724 AAA domain (Cdc48 subfamily) J4N44_RS20755 PF10431 C-terminal, D2-small domain, of ClpB protein J4N44_RS20760 PF05638 Type VI secretion system effector, Hcp J4N44_RS20765 PF04717 Type VI secretion system, phage-baseplate injector J4N44_RS20790 PF00069 Protein kinase domain J4N44_RS20805 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N44_RS20815 PF05947 Type VI secretion system, TssF J4N44_RS20825 PF01037 Lrp/AsnC ligand binding domain J4N44_RS20855 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J4N44_RS20895 PF13181 Tetratricopeptide repeat J4N44_RS20895 PF17128 Domain of unknown function (DUF5107) J4N44_RS20900 PF00083 Sugar (and other) transporter J4N44_RS20905 PF00480 ROK family J4N44_RS20910 PF01263 Aldose 1-epimerase J4N44_RS20915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J4N44_RS20915 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J4N44_RS20920 PF06276 Ferric iron reductase FhuF-like transporter J4N44_RS20920 PF04183 IucA / IucC family J4N44_RS20935 PF00206 Lyase J4N44_RS20935 PF02655 ATP-grasp domain J4N44_RS20940 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS20940 PF00593 TonB dependent receptor J4N44_RS20945 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS20945 PF07660 Secretin and TonB N terminus short domain J4N44_RS20945 PF00593 TonB dependent receptor J4N44_RS20950 PF01497 Periplasmic binding protein J4N44_RS20955 PF01032 FecCD transport family J4N44_RS20960 PF01032 FecCD transport family J4N44_RS20965 PF00005 ABC transporter J4N44_RS20970 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS20970 PF00593 TonB dependent receptor J4N44_RS20980 PF00563 EAL domain J4N44_RS20980 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS20980 PF08447 PAS fold J4N44_RS20980 PF08448 PAS fold J4N44_RS20985 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS20985 PF00072 Response regulator receiver domain J4N44_RS20990 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS20990 PF00989 PAS fold J4N44_RS20990 PF00672 HAMP domain J4N44_RS20990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS20990 PF18698 Histidine kinase sensor domain J4N44_RS20995 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS21000 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS21000 PF12911 N-terminal TM domain of oligopeptide transport permease C J4N44_RS21005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS21010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS21010 PF00005 ABC transporter J4N44_RS21015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS21015 PF00005 ABC transporter J4N44_RS21030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS21030 PF09456 RcsC Alpha-Beta-Loop (ABL) J4N44_RS21030 PF00072 Response regulator receiver domain J4N44_RS21030 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS21035 PF13188 PAS domain J4N44_RS21035 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS21035 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS21035 PF00563 EAL domain J4N44_RS21040 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS21040 PF00072 Response regulator receiver domain J4N44_RS21045 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS21050 PF03466 LysR substrate binding domain J4N44_RS21050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS21055 PF00072 Response regulator receiver domain J4N44_RS21055 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS21060 PF00672 HAMP domain J4N44_RS21060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS21065 PF00881 Nitroreductase family J4N44_RS21070 PF00072 Response regulator receiver domain J4N44_RS21070 PF01584 CheW-like domain J4N44_RS21075 PF07963 Prokaryotic N-terminal methylation motif J4N44_RS21085 PF00892 EamA-like transporter family J4N44_RS21100 PF00034 Cytochrome c J4N44_RS21100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J4N44_RS21110 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N44_RS21115 PF00034 Cytochrome c J4N44_RS21135 PF00682 HMGL-like J4N44_RS21140 PF00378 Enoyl-CoA hydratase/isomerase J4N44_RS21145 PF01039 Carboxyl transferase domain J4N44_RS21150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N44_RS21150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N44_RS21150 PF02770 Acyl-CoA dehydrogenase, middle domain J4N44_RS21155 PF00376 MerR family regulatory protein J4N44_RS21155 PF09278 MerR, DNA binding J4N44_RS21160 PF00108 Thiolase, N-terminal domain J4N44_RS21160 PF02803 Thiolase, C-terminal domain J4N44_RS21165 PF00171 Aldehyde dehydrogenase family J4N44_RS21170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J4N44_RS21170 PF02770 Acyl-CoA dehydrogenase, middle domain J4N44_RS21170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J4N44_RS21175 PF00378 Enoyl-CoA hydratase/isomerase J4N44_RS21180 PF00378 Enoyl-CoA hydratase/isomerase J4N44_RS21185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J4N44_RS21185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J4N44_RS21195 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4N44_RS21195 PF06481 COX Aromatic Rich Motif J4N44_RS21200 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N44_RS21205 PF00510 Cytochrome c oxidase subunit III J4N44_RS21210 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J4N44_RS21215 PF01040 UbiA prenyltransferase family J4N44_RS21230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N44_RS21230 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS21235 PF01569 PAP2 superfamily J4N44_RS21245 PF00893 Small Multidrug Resistance protein J4N44_RS21250 PF00892 EamA-like transporter family J4N44_RS21270 PF00171 Aldehyde dehydrogenase family J4N44_RS21275 PF00664 ABC transporter transmembrane region J4N44_RS21275 PF00005 ABC transporter J4N44_RS21290 PF01638 HxlR-like helix-turn-helix J4N44_RS21300 PF02811 PHP domain J4N44_RS21300 PF14579 Helix-hairpin-helix motif J4N44_RS21300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J4N44_RS21300 PF07733 Bacterial DNA polymerase III alpha NTPase domain J4N44_RS21300 PF00929 Exonuclease J4N44_RS21300 PF11490 DNA polymerase III polC-type N-terminus II J4N44_RS21315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS21315 PF03466 LysR substrate binding domain J4N44_RS21320 PF01039 Carboxyl transferase domain J4N44_RS21320 PF17848 Acetyl-coA carboxylase zinc finger domain J4N44_RS21350 PF00271 Helicase conserved C-terminal domain J4N44_RS21350 PF08494 DEAD/H associated J4N44_RS21350 PF00270 DEAD/DEAH box helicase J4N44_RS21355 PF02347 Glycine cleavage system P-protein J4N44_RS21360 PF01597 Glycine cleavage H-protein J4N44_RS21365 PF00464 Serine hydroxymethyltransferase J4N44_RS21375 PF01571 Aminomethyltransferase folate-binding domain J4N44_RS21375 PF08669 Glycine cleavage T-protein C-terminal barrel domain J4N44_RS21385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS21390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS21395 PF00873 AcrB/AcrD/AcrF family J4N44_RS21420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS21420 PF02378 Phosphotransferase system, EIIC J4N44_RS21425 PF00294 pfkB family carbohydrate kinase J4N44_RS21430 PF00381 PTS HPr component phosphorylation site J4N44_RS21430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS21435 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS21435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N44_RS21450 PF00989 PAS fold J4N44_RS21450 PF00563 EAL domain J4N44_RS21450 PF01590 GAF domain J4N44_RS21450 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS21455 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS21460 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS21465 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS21470 PF00005 ABC transporter J4N44_RS21480 PF00465 Iron-containing alcohol dehydrogenase J4N44_RS21485 PF12833 Helix-turn-helix domain J4N44_RS21485 PF06719 AraC-type transcriptional regulator N-terminus J4N44_RS21490 PF06483 Chitinase C J4N44_RS21490 PF00704 Glycosyl hydrolases family 18 J4N44_RS21495 PF00483 Nucleotidyl transferase J4N44_RS21500 PF01268 Formate--tetrahydrofolate ligase J4N44_RS21505 PF00294 pfkB family carbohydrate kinase J4N44_RS21520 PF11849 Domain of unknown function (DUF3369) J4N44_RS21525 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS21535 PF00672 HAMP domain J4N44_RS21535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS21540 PF04336 Acyl carrier protein phosphodiesterase J4N44_RS21545 PF00271 Helicase conserved C-terminal domain J4N44_RS21545 PF00270 DEAD/DEAH box helicase J4N44_RS21550 PF00563 EAL domain J4N44_RS21550 PF12792 CSS motif domain associated with EAL J4N44_RS21565 PF01292 Prokaryotic cytochrome b561 J4N44_RS21570 PF04264 YceI-like domain J4N44_RS21575 PF01226 Formate/nitrite transporter J4N44_RS21580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS21580 PF03466 LysR substrate binding domain J4N44_RS21585 PF06496 Protein of unknown function (DUF1097) J4N44_RS21590 PF11398 Protein of unknown function (DUF2813) J4N44_RS21595 PF00149 Calcineurin-like phosphoesterase J4N44_RS21595 PF02872 5'-nucleotidase, C-terminal domain J4N44_RS21600 PF03741 Integral membrane protein TerC family J4N44_RS21615 PF02310 B12 binding domain J4N44_RS21615 PF00809 Pterin binding enzyme J4N44_RS21615 PF02574 Homocysteine S-methyltransferase J4N44_RS21615 PF02607 B12 binding domain J4N44_RS21615 PF02965 Vitamin B12 dependent methionine synthase, activation domain J4N44_RS21630 PF12262 Bacterial virulence factor lipase N-terminal J4N44_RS21635 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N44_RS21650 PF03061 Thioesterase superfamily J4N44_RS21660 PF12793 Sugar transport-related sRNA regulator N-term J4N44_RS21660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS21685 PF00226 DnaJ domain J4N44_RS21685 PF01556 DnaJ C terminal domain J4N44_RS21685 PF00684 DnaJ central domain J4N44_RS21695 PF13188 PAS domain J4N44_RS21695 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS21695 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS21695 PF00563 EAL domain J4N44_RS21700 PF07055 Enoyl reductase FAD binding domain J4N44_RS21700 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase J4N44_RS21700 PF12241 Trans-2-enoyl-CoA reductase catalytic region J4N44_RS21705 PF13472 GDSL-like Lipase/Acylhydrolase family J4N44_RS21710 PF00005 ABC transporter J4N44_RS21725 PF02626 Carboxyltransferase domain, subdomain A and B J4N44_RS21735 PF03746 LamB/YcsF family J4N44_RS21740 PF08448 PAS fold J4N44_RS21740 PF08447 PAS fold J4N44_RS21740 PF05231 MASE1 J4N44_RS21740 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS21740 PF00563 EAL domain J4N44_RS21740 PF13426 PAS domain J4N44_RS21745 PF16363 GDP-mannose 4,6 dehydratase J4N44_RS21750 PF00593 TonB dependent receptor J4N44_RS21750 PF04886 PT repeat J4N44_RS21750 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS21755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS21755 PF03466 LysR substrate binding domain J4N44_RS21760 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS21760 PF04886 PT repeat J4N44_RS21760 PF00593 TonB dependent receptor J4N44_RS21765 PF13607 Succinyl-CoA ligase like flavodoxin domain J4N44_RS21765 PF00583 Acetyltransferase (GNAT) family J4N44_RS21765 PF13380 CoA binding domain J4N44_RS21770 PF05036 Sporulation related domain J4N44_RS21785 PF01253 Translation initiation factor SUI1 J4N44_RS21810 PF03701 Uncharacterised protein family (UPF0181) J4N44_RS21825 PF00072 Response regulator receiver domain J4N44_RS21825 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS21835 PF02233 NAD(P) transhydrogenase beta subunit J4N44_RS21840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J4N44_RS21840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J4N44_RS21840 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J4N44_RS21855 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS21870 PF00360 Phytochrome region J4N44_RS21870 PF01590 GAF domain J4N44_RS21870 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS21870 PF00563 EAL domain J4N44_RS21880 PF00005 ABC transporter J4N44_RS21880 PF03459 TOBE domain J4N44_RS21885 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS21895 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J4N44_RS21895 PF07685 CobB/CobQ-like glutamine amidotransferase domain J4N44_RS21900 PF04076 Bacterial OB fold (BOF) protein J4N44_RS21910 PF08443 RimK-like ATP-grasp domain J4N44_RS21910 PF18030 RimK PreATP-grasp domain J4N44_RS21915 PF00155 Aminotransferase class I and II J4N44_RS21920 PF12833 Helix-turn-helix domain J4N44_RS21925 PF01554 MatE J4N44_RS21935 PF13597 Anaerobic ribonucleoside-triphosphate reductase J4N44_RS21935 PF03477 ATP cone domain J4N44_RS21950 PF04143 Sulphur transport J4N44_RS21960 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS21960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J4N44_RS21990 PF07690 Major Facilitator Superfamily J4N44_RS21995 PF00072 Response regulator receiver domain J4N44_RS21995 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS22000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS22000 PF05231 MASE1 J4N44_RS22000 PF07730 Histidine kinase J4N44_RS22005 PF07690 Major Facilitator Superfamily J4N44_RS22010 PF01238 Phosphomannose isomerase type I J4N44_RS22020 PF01594 AI-2E family transporter J4N44_RS22030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS22030 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS22055 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J4N44_RS22055 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J4N44_RS22060 PF00085 Thioredoxin J4N44_RS22065 PF07690 Major Facilitator Superfamily J4N44_RS22070 PF07495 Y_Y_Y domain J4N44_RS22070 PF00072 Response regulator receiver domain J4N44_RS22070 PF12833 Helix-turn-helix domain J4N44_RS22070 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS22070 PF07494 Two component regulator propeller J4N44_RS22070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS22080 PF11756 Nitrous oxide-stimulated promoter J4N44_RS22095 PF00593 TonB dependent receptor J4N44_RS22095 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS22105 PF03605 Anaerobic c4-dicarboxylate membrane transporter J4N44_RS22120 PF10414 Sirohaem synthase dimerisation region J4N44_RS22120 PF14824 Sirohaem biosynthesis protein central J4N44_RS22120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N44_RS22125 PF01226 Formate/nitrite transporter J4N44_RS22130 PF13806 Rieske-like [2Fe-2S] domain J4N44_RS22135 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4N44_RS22135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N44_RS22135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N44_RS22135 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS22135 PF04324 BFD-like [2Fe-2S] binding domain J4N44_RS22140 PF00563 EAL domain J4N44_RS22140 PF13426 PAS domain J4N44_RS22140 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS22170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS22170 PF00672 HAMP domain J4N44_RS22185 PF00128 Alpha amylase, catalytic domain J4N44_RS22185 PF09154 Domain of unknown function (DUF1939) J4N44_RS22210 PF13462 Thioredoxin J4N44_RS22220 PF01565 FAD binding domain J4N44_RS22220 PF09330 D-lactate dehydrogenase, membrane binding J4N44_RS22225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS22225 PF03466 LysR substrate binding domain J4N44_RS22235 PF05762 VWA domain containing CoxE-like protein J4N44_RS22240 PF12592 Protein of unknown function (DUF3763) J4N44_RS22240 PF07728 AAA domain (dynein-related subfamily) J4N44_RS22240 PF17868 AAA lid domain J4N44_RS22250 PF01212 Beta-eliminating lyase J4N44_RS22255 PF00034 Cytochrome c J4N44_RS22260 PF03606 C4-dicarboxylate anaerobic carrier J4N44_RS22270 PF07690 Major Facilitator Superfamily J4N44_RS22280 PF08212 Lipocalin-like domain J4N44_RS22310 PF00704 Glycosyl hydrolases family 18 J4N44_RS22320 PF13476 AAA domain J4N44_RS22325 PF00149 Calcineurin-like phosphoesterase J4N44_RS22325 PF12320 Type 5 capsule protein repressor C-terminal domain J4N44_RS22350 PF03527 RHS protein J4N44_RS22365 PF04717 Type VI secretion system, phage-baseplate injector J4N44_RS22375 PF07724 AAA domain (Cdc48 subfamily) J4N44_RS22375 PF00004 ATPase family associated with various cellular activities (AAA) J4N44_RS22375 PF10431 C-terminal, D2-small domain, of ClpB protein J4N44_RS22375 PF17871 AAA lid domain J4N44_RS22385 PF05947 Type VI secretion system, TssF J4N44_RS22400 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N44_RS22405 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J4N44_RS22410 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 J4N44_RS22430 PF06761 Intracellular multiplication and human macrophage-killing J4N44_RS22430 PF14331 ImcF-related N-terminal domain J4N44_RS22430 PF06744 Type VI secretion protein IcmF C-terminal J4N44_RS22435 PF13677 Membrane MotB of proton-channel complex MotA/MotB J4N44_RS22435 PF00691 OmpA family J4N44_RS22455 PF03793 PASTA domain J4N44_RS22455 PF00069 Protein kinase domain J4N44_RS22480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS22485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J4N44_RS22495 PF01757 Acyltransferase family J4N44_RS22505 PF09722 Protein of unknown function (DUF2384) J4N44_RS22510 PF01645 Conserved region in glutamate synthase J4N44_RS22510 PF13187 4Fe-4S dicluster domain J4N44_RS22520 PF00753 Metallo-beta-lactamase superfamily J4N44_RS22525 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) J4N44_RS22580 PF00072 Response regulator receiver domain J4N44_RS22580 PF12833 Helix-turn-helix domain J4N44_RS22600 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS22600 PF00072 Response regulator receiver domain J4N44_RS22605 PF00378 Enoyl-CoA hydratase/isomerase J4N44_RS22610 PF01594 AI-2E family transporter J4N44_RS22615 PF14602 Hexapeptide repeat of succinyl-transferase J4N44_RS22615 PF12464 Maltose acetyltransferase J4N44_RS22625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS22625 PF00672 HAMP domain J4N44_RS22625 PF02743 Cache domain J4N44_RS22635 PF01292 Prokaryotic cytochrome b561 J4N44_RS22645 PF08525 Opacity-associated protein A N-terminal motif J4N44_RS22645 PF01476 LysM domain J4N44_RS22645 PF01551 Peptidase family M23 J4N44_RS22650 PF03466 LysR substrate binding domain J4N44_RS22650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS22665 PF00072 Response regulator receiver domain J4N44_RS22665 PF00211 Adenylate and Guanylate cyclase catalytic domain J4N44_RS22695 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS22695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J4N44_RS22695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J4N44_RS22695 PF04324 BFD-like [2Fe-2S] binding domain J4N44_RS22695 PF13806 Rieske-like [2Fe-2S] domain J4N44_RS22695 PF18267 Rubredoxin NAD+ reductase C-terminal domain J4N44_RS22700 PF00005 ABC transporter J4N44_RS22705 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS22710 PF00005 ABC transporter J4N44_RS22715 PF08376 Nitrate and nitrite sensing J4N44_RS22715 PF03861 ANTAR domain J4N44_RS22720 PF01738 Dienelactone hydrolase family J4N44_RS22725 PF00591 Glycosyl transferase family, a/b domain J4N44_RS22725 PF02885 Glycosyl transferase family, helical bundle domain J4N44_RS22730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J4N44_RS22730 PF10414 Sirohaem synthase dimerisation region J4N44_RS22730 PF14824 Sirohaem biosynthesis protein central J4N44_RS22735 PF00384 Molybdopterin oxidoreductase J4N44_RS22735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N44_RS22735 PF01568 Molydopterin dinucleotide binding domain J4N44_RS22745 PF08448 PAS fold J4N44_RS22745 PF00563 EAL domain J4N44_RS22745 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS22750 PF03222 Tryptophan/tyrosine permease family J4N44_RS22755 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS22755 PF08448 PAS fold J4N44_RS22765 PF01483 Proprotein convertase P-domain J4N44_RS22765 PF00082 Subtilase family J4N44_RS22775 PF00245 Alkaline phosphatase J4N44_RS22790 PF00072 Response regulator receiver domain J4N44_RS22790 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS22820 PF04314 Copper chaperone PCu(A)C J4N44_RS22825 PF00012 Hsp70 protein J4N44_RS22840 PF00676 Dehydrogenase E1 component J4N44_RS22845 PF02780 Transketolase, C-terminal domain J4N44_RS22845 PF02779 Transketolase, pyrimidine binding domain J4N44_RS22850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J4N44_RS22850 PF00364 Biotin-requiring enzyme J4N44_RS22850 PF02817 e3 binding domain J4N44_RS22855 PF00766 Electron transfer flavoprotein FAD-binding domain J4N44_RS22855 PF01012 Electron transfer flavoprotein domain J4N44_RS22860 PF01012 Electron transfer flavoprotein domain J4N44_RS22870 PF03466 LysR substrate binding domain J4N44_RS22870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS22890 PF02424 ApbE family J4N44_RS22895 PF03358 NADPH-dependent FMN reductase J4N44_RS22895 PF00890 FAD binding domain J4N44_RS22895 PF04205 FMN-binding domain J4N44_RS22900 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS22900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS22900 PF00989 PAS fold J4N44_RS22900 PF16736 Single Cache-like J4N44_RS22905 PF00072 Response regulator receiver domain J4N44_RS22905 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS22920 PF14497 Glutathione S-transferase, C-terminal domain J4N44_RS22920 PF02798 Glutathione S-transferase, N-terminal domain J4N44_RS22925 PF03466 LysR substrate binding domain J4N44_RS22925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS22935 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS22940 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS22945 PF00497 Bacterial extracellular solute-binding proteins, family 3 J4N44_RS22950 PF00005 ABC transporter J4N44_RS22955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS22955 PF02743 Cache domain J4N44_RS22955 PF00672 HAMP domain J4N44_RS22985 PF02028 BCCT, betaine/carnitine/choline family transporter J4N44_RS22995 PF00171 Aldehyde dehydrogenase family J4N44_RS23005 PF03466 LysR substrate binding domain J4N44_RS23005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS23010 PF00871 Acetokinase family J4N44_RS23015 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS23015 PF00563 EAL domain J4N44_RS23015 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS23020 PF03880 DbpA RNA binding domain J4N44_RS23020 PF00270 DEAD/DEAH box helicase J4N44_RS23020 PF00271 Helicase conserved C-terminal domain J4N44_RS23025 PF00575 S1 RNA binding domain J4N44_RS23025 PF08206 Ribonuclease B OB domain J4N44_RS23025 PF00773 RNB domain J4N44_RS23030 PF12833 Helix-turn-helix domain J4N44_RS23040 PF12849 PBP superfamily domain J4N44_RS23045 PF01575 MaoC like domain J4N44_RS23055 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS23055 PF16527 Two-component sensor protein CpxA, periplasmic domain J4N44_RS23055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS23055 PF00672 HAMP domain J4N44_RS23060 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS23060 PF00072 Response regulator receiver domain J4N44_RS23065 PF08534 Redoxin J4N44_RS23070 PF08534 Redoxin J4N44_RS23075 PF00892 EamA-like transporter family J4N44_RS23080 PF00005 ABC transporter J4N44_RS23085 PF12792 CSS motif domain associated with EAL J4N44_RS23085 PF00563 EAL domain J4N44_RS23105 PF00270 DEAD/DEAH box helicase J4N44_RS23105 PF00271 Helicase conserved C-terminal domain J4N44_RS23110 PF13426 PAS domain J4N44_RS23110 PF08448 PAS fold J4N44_RS23110 PF08447 PAS fold J4N44_RS23110 PF05231 MASE1 J4N44_RS23110 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS23110 PF00563 EAL domain J4N44_RS23115 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4N44_RS23115 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4N44_RS23125 PF01470 Pyroglutamyl peptidase J4N44_RS23140 PF00593 TonB dependent receptor J4N44_RS23140 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS23150 PF13411 MerR HTH family regulatory protein J4N44_RS23155 PF00005 ABC transporter J4N44_RS23160 PF01032 FecCD transport family J4N44_RS23165 PF01032 FecCD transport family J4N44_RS23170 PF01497 Periplasmic binding protein J4N44_RS23185 PF01048 Phosphorylase superfamily J4N44_RS23190 PF04973 Nicotinamide mononucleotide transporter J4N44_RS23200 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS23205 PF00294 pfkB family carbohydrate kinase J4N44_RS23210 PF13407 Periplasmic binding protein domain J4N44_RS23215 PF02653 Branched-chain amino acid transport system / permease component J4N44_RS23220 PF00005 ABC transporter J4N44_RS23225 PF05025 RbsD / FucU transport protein family J4N44_RS23230 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS23230 PF00563 EAL domain J4N44_RS23235 PF01048 Phosphorylase superfamily J4N44_RS23245 PF01177 Asp/Glu/Hydantoin racemase J4N44_RS23295 PF04116 Fatty acid hydroxylase superfamily J4N44_RS23310 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS23310 PF09308 LuxQ, periplasmic J4N44_RS23310 PF00072 Response regulator receiver domain J4N44_RS23310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS23315 PF00034 Cytochrome c J4N44_RS23315 PF03150 Di-haem cytochrome c peroxidase J4N44_RS23320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS23320 PF09308 LuxQ, periplasmic J4N44_RS23320 PF00072 Response regulator receiver domain J4N44_RS23320 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS23325 PF00563 EAL domain J4N44_RS23325 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS23325 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS23340 PF01145 SPFH domain / Band 7 family J4N44_RS23340 PF16200 C-terminal region of band_7 J4N44_RS23350 PF00881 Nitroreductase family J4N44_RS23360 PF03466 LysR substrate binding domain J4N44_RS23360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS23375 PF08543 Phosphomethylpyrimidine kinase J4N44_RS23380 PF00155 Aminotransferase class I and II J4N44_RS23385 PF06826 Predicted Permease Membrane Region J4N44_RS23385 PF02080 TrkA-C domain J4N44_RS23395 PF13533 Biotin-lipoyl like J4N44_RS23410 PF00135 Carboxylesterase family J4N44_RS23415 PF13091 PLD-like domain J4N44_RS23420 PF17243 POTRA domain TamA domain 1 J4N44_RS23420 PF01103 Surface antigen J4N44_RS23430 PF01544 CorA-like Mg2+ transporter protein J4N44_RS23435 PF00005 ABC transporter J4N44_RS23435 PF00571 CBS domain J4N44_RS23440 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS23445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J4N44_RS23450 PF05199 GMC oxidoreductase J4N44_RS23450 PF00732 GMC oxidoreductase J4N44_RS23455 PF00171 Aldehyde dehydrogenase family J4N44_RS23460 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS23460 PF13977 BetI-type transcriptional repressor, C-terminal J4N44_RS23465 PF00171 Aldehyde dehydrogenase family J4N44_RS23470 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term J4N44_RS23470 PF12833 Helix-turn-helix domain J4N44_RS23475 PF07694 5TMR of 5TMR-LYT J4N44_RS23475 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS23490 PF01979 Amidohydrolase family J4N44_RS23500 PF01553 Acyltransferase J4N44_RS23530 PF00691 OmpA family J4N44_RS23530 PF13488 Glycine zipper J4N44_RS23565 PF00437 Type II/IV secretion system protein J4N44_RS23570 PF10609 NUBPL iron-transfer P-loop NTPase J4N44_RS23580 PF00263 Bacterial type II and III secretion system protein J4N44_RS23580 PF04972 BON domain J4N44_RS23580 PF13629 Pilus formation protein N terminal region J4N44_RS23600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS23600 PF03466 LysR substrate binding domain J4N44_RS23605 PF12146 Serine aminopeptidase, S33 J4N44_RS23615 PF05762 VWA domain containing CoxE-like protein J4N44_RS23620 PF17868 AAA lid domain J4N44_RS23620 PF12592 Protein of unknown function (DUF3763) J4N44_RS23620 PF07728 AAA domain (dynein-related subfamily) J4N44_RS23625 PF00478 IMP dehydrogenase / GMP reductase domain J4N44_RS23630 PF01256 Carbohydrate kinase J4N44_RS23630 PF03853 YjeF-related protein N-terminus J4N44_RS23640 PF00072 Response regulator receiver domain J4N44_RS23645 PF00248 Aldo/keto reductase family J4N44_RS23660 PF00654 Voltage gated chloride channel J4N44_RS23670 PF01566 Natural resistance-associated macrophage protein J4N44_RS23675 PF01227 GTP cyclohydrolase I J4N44_RS23680 PF00994 Probable molybdopterin binding domain J4N44_RS23680 PF03454 MoeA C-terminal region (domain IV) J4N44_RS23680 PF03453 MoeA N-terminal region (domain I and II) J4N44_RS23685 PF00899 ThiF family J4N44_RS23700 PF00581 Rhodanese-like domain J4N44_RS23705 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS23705 PF00563 EAL domain J4N44_RS23705 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS23710 PF08329 Chitinase A, N-terminal domain J4N44_RS23710 PF00704 Glycosyl hydrolases family 18 J4N44_RS23720 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4N44_RS23725 PF02780 Transketolase, C-terminal domain J4N44_RS23725 PF00456 Transketolase, thiamine diphosphate binding domain J4N44_RS23725 PF02779 Transketolase, pyrimidine binding domain J4N44_RS23730 PF08447 PAS fold J4N44_RS23730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS23735 PF07690 Major Facilitator Superfamily J4N44_RS23740 PF00793 DAHP synthetase I family J4N44_RS23745 PF00691 OmpA family J4N44_RS23745 PF01389 OmpA-like transmembrane domain J4N44_RS23750 PF01040 UbiA prenyltransferase family J4N44_RS23755 PF02628 Cytochrome oxidase assembly protein J4N44_RS23775 PF00510 Cytochrome c oxidase subunit III J4N44_RS23780 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J4N44_RS23785 PF00115 Cytochrome C and Quinol oxidase polypeptide I J4N44_RS23790 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J4N44_RS23790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J4N44_RS23795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J4N44_RS23795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J4N44_RS23795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J4N44_RS23795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J4N44_RS23805 PF01810 LysE type translocator J4N44_RS23825 PF01557 Fumarylacetoacetate (FAA) hydrolase family J4N44_RS23840 PF00892 EamA-like transporter family J4N44_RS23845 PF00462 Glutaredoxin J4N44_RS23855 PF07690 Major Facilitator Superfamily J4N44_RS23860 PF03466 LysR substrate binding domain J4N44_RS23860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS23865 PF08448 PAS fold J4N44_RS23865 PF08447 PAS fold J4N44_RS23865 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS23865 PF00563 EAL domain J4N44_RS23870 PF01551 Peptidase family M23 J4N44_RS23870 PF08525 Opacity-associated protein A N-terminal motif J4N44_RS23870 PF01476 LysM domain J4N44_RS23890 PF07670 Nucleoside recognition J4N44_RS23895 PF02743 Cache domain J4N44_RS23895 PF00672 HAMP domain J4N44_RS23895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS23905 PF03222 Tryptophan/tyrosine permease family J4N44_RS23940 PF08240 Alcohol dehydrogenase GroES-like domain J4N44_RS23940 PF00107 Zinc-binding dehydrogenase J4N44_RS23945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS23945 PF02378 Phosphotransferase system, EIIC J4N44_RS23950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS23955 PF07702 UTRA domain J4N44_RS23955 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS23960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit J4N44_RS23960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS23960 PF02378 Phosphotransferase system, EIIC J4N44_RS23965 PF07748 Glycosyl hydrolases family 38 C-terminal domain J4N44_RS23965 PF01074 Glycosyl hydrolases family 38 N-terminal domain J4N44_RS23965 PF09261 Alpha mannosidase middle domain J4N44_RS23970 PF01238 Phosphomannose isomerase type I J4N44_RS23975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J4N44_RS23990 PF01638 HxlR-like helix-turn-helix J4N44_RS24005 PF01758 Sodium Bile acid symporter family J4N44_RS24020 PF01161 Phosphatidylethanolamine-binding protein J4N44_RS24025 PF02567 Phenazine biosynthesis-like protein J4N44_RS24030 PF02525 Flavodoxin-like fold J4N44_RS24035 PF02254 TrkA-N domain J4N44_RS24035 PF00999 Sodium/hydrogen exchanger family J4N44_RS24045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS24045 PF03466 LysR substrate binding domain J4N44_RS24075 PF03466 LysR substrate binding domain J4N44_RS24075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS24095 PF00698 Acyl transferase domain J4N44_RS24095 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N44_RS24095 PF00107 Zinc-binding dehydrogenase J4N44_RS24095 PF08659 KR domain J4N44_RS24095 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N44_RS24095 PF14765 Polyketide synthase dehydratase J4N44_RS24095 PF00550 Phosphopantetheine attachment site J4N44_RS24095 PF16197 Ketoacyl-synthetase C-terminal extension J4N44_RS24095 PF08240 Alcohol dehydrogenase GroES-like domain J4N44_RS24100 PF00128 Alpha amylase, catalytic domain J4N44_RS24110 PF00533 BRCA1 C Terminus (BRCT) domain J4N44_RS24110 PF01653 NAD-dependent DNA ligase adenylation domain J4N44_RS24110 PF03120 NAD-dependent DNA ligase OB-fold domain J4N44_RS24110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J4N44_RS24110 PF12826 Helix-hairpin-helix motif J4N44_RS24120 PF00072 Response regulator receiver domain J4N44_RS24120 PF01584 CheW-like domain J4N44_RS24130 PF01243 Pyridoxamine 5'-phosphate oxidase J4N44_RS24135 PF06228 Haem utilisation ChuX/HutX J4N44_RS24140 PF04055 Radical SAM superfamily J4N44_RS24145 PF03544 Gram-negative bacterial TonB protein C-terminal J4N44_RS24150 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS24155 PF02472 Biopolymer transport protein ExbD/TolR J4N44_RS24165 PF01032 FecCD transport family J4N44_RS24170 PF00005 ABC transporter J4N44_RS24175 PF17200 Single Cache domain 2 J4N44_RS24175 PF00672 HAMP domain J4N44_RS24175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS24185 PF00005 ABC transporter J4N44_RS24195 PF01042 Endoribonuclease L-PSP J4N44_RS24205 PF02838 Glycosyl hydrolase family 20, domain 2 J4N44_RS24205 PF00728 Glycosyl hydrolase family 20, catalytic domain J4N44_RS24210 PF01081 KDPG and KHG aldolase J4N44_RS24215 PF00294 pfkB family carbohydrate kinase J4N44_RS24220 PF00474 Sodium:solute symporter family J4N44_RS24230 PF07969 Amidohydrolase family J4N44_RS24240 PF02685 Glucokinase J4N44_RS24240 PF01418 Helix-turn-helix domain, rpiR family J4N44_RS24240 PF01380 SIS domain J4N44_RS24255 PF12838 4Fe-4S dicluster domain J4N44_RS24255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J4N44_RS24255 PF00384 Molybdopterin oxidoreductase J4N44_RS24255 PF01568 Molydopterin dinucleotide binding domain J4N44_RS24255 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J4N44_RS24270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS24275 PF00873 AcrB/AcrD/AcrF family J4N44_RS24300 PF16197 Ketoacyl-synthetase C-terminal extension J4N44_RS24300 PF08240 Alcohol dehydrogenase GroES-like domain J4N44_RS24300 PF14765 Polyketide synthase dehydratase J4N44_RS24300 PF00550 Phosphopantetheine attachment site J4N44_RS24300 PF00109 Beta-ketoacyl synthase, N-terminal domain J4N44_RS24300 PF02801 Beta-ketoacyl synthase, C-terminal domain J4N44_RS24300 PF00698 Acyl transferase domain J4N44_RS24300 PF08659 KR domain J4N44_RS24305 PF03543 Yersinia/Haemophilus virulence surface antigen J4N44_RS24315 PF00583 Acetyltransferase (GNAT) family J4N44_RS24315 PF13673 Acetyltransferase (GNAT) domain J4N44_RS24335 PF00675 Insulinase (Peptidase family M16) J4N44_RS24335 PF05193 Peptidase M16 inactive domain J4N44_RS24340 PF00005 ABC transporter J4N44_RS24340 PF06472 ABC transporter transmembrane region 2 J4N44_RS24345 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS24355 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS24360 PF01618 MotA/TolQ/ExbB proton channel family J4N44_RS24365 PF02472 Biopolymer transport protein ExbD/TolR J4N44_RS24380 PF00293 NUDIX domain J4N44_RS24390 PF03150 Di-haem cytochrome c peroxidase J4N44_RS24390 PF00034 Cytochrome c J4N44_RS24390 PF14376 Haem-binding domain J4N44_RS24400 PF13302 Acetyltransferase (GNAT) domain J4N44_RS24410 PF00326 Prolyl oligopeptidase family J4N44_RS24410 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N44_RS24415 PF00005 ABC transporter J4N44_RS24415 PF16326 ABC transporter C-terminal domain J4N44_RS24415 PF12848 ABC transporter J4N44_RS24420 PF01980 tRNA-methyltransferase O J4N44_RS24440 PF00582 Universal stress protein family J4N44_RS24450 PF00455 DeoR C terminal sensor domain J4N44_RS24450 PF08220 DeoR-like helix-turn-helix domain J4N44_RS24455 PF03009 Glycerophosphoryl diester phosphodiesterase family J4N44_RS24460 PF13416 Bacterial extracellular solute-binding protein J4N44_RS24465 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS24470 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS24475 PF00005 ABC transporter J4N44_RS24475 PF17912 MalK OB fold domain J4N44_RS24490 PF01047 MarR family J4N44_RS24505 PF07683 Cobalamin synthesis protein cobW C-terminal domain J4N44_RS24505 PF02492 CobW/HypB/UreG, nucleotide-binding domain J4N44_RS24510 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS24515 PF01979 Amidohydrolase family J4N44_RS24525 PF01734 Patatin-like phospholipase J4N44_RS24530 PF02678 Pirin J4N44_RS24530 PF05726 Pirin C-terminal cupin domain J4N44_RS24535 PF00313 'Cold-shock' DNA-binding domain J4N44_RS24550 PF00962 Adenosine/AMP deaminase J4N44_RS24555 PF17151 Periplasmic sensor domain J4N44_RS24555 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS24560 PF03466 LysR substrate binding domain J4N44_RS24560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS24575 PF00462 Glutaredoxin J4N44_RS24575 PF08534 Redoxin J4N44_RS24580 PF08241 Methyltransferase domain J4N44_RS24590 PF08448 PAS fold J4N44_RS24590 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS24595 PF07943 Penicillin-binding protein 5, C-terminal domain J4N44_RS24595 PF00768 D-alanyl-D-alanine carboxypeptidase J4N44_RS24600 PF02028 BCCT, betaine/carnitine/choline family transporter J4N44_RS24605 PF02525 Flavodoxin-like fold J4N44_RS24610 PF03466 LysR substrate binding domain J4N44_RS24610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS24615 PF02798 Glutathione S-transferase, N-terminal domain J4N44_RS24620 PF02909 Tetracyclin repressor-like, C-terminal domain J4N44_RS24620 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS24625 PF01872 RibD C-terminal domain J4N44_RS24640 PF00005 ABC transporter J4N44_RS24640 PF00664 ABC transporter transmembrane region J4N44_RS24640 PF03412 Peptidase C39 family J4N44_RS24645 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS24645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS24650 PF10502 Signal peptidase, peptidase S26 J4N44_RS24710 PF00106 short chain dehydrogenase J4N44_RS24720 PF00375 Sodium:dicarboxylate symporter family J4N44_RS24725 PF07992 Pyridine nucleotide-disulphide oxidoreductase J4N44_RS24735 PF00127 Copper binding proteins, plastocyanin/azurin family J4N44_RS24740 PF02378 Phosphotransferase system, EIIC J4N44_RS24745 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS24745 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS24745 PF00563 EAL domain J4N44_RS24770 PF00005 ABC transporter J4N44_RS24775 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS24780 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS24785 PF12849 PBP superfamily domain J4N44_RS24790 PF02743 Cache domain J4N44_RS24790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS24790 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS24795 PF00072 Response regulator receiver domain J4N44_RS24795 PF01966 HD domain J4N44_RS24800 PF14602 Hexapeptide repeat of succinyl-transferase J4N44_RS24800 PF12464 Maltose acetyltransferase J4N44_RS24805 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS24810 PF00664 ABC transporter transmembrane region J4N44_RS24810 PF00005 ABC transporter J4N44_RS24820 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS24825 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS24835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS24835 PF02743 Cache domain J4N44_RS24835 PF00672 HAMP domain J4N44_RS24840 PF07726 ATPase family associated with various cellular activities (AAA) J4N44_RS24840 PF17863 AAA lid domain J4N44_RS24845 PF01882 Protein of unknown function DUF58 J4N44_RS24855 PF13519 von Willebrand factor type A domain J4N44_RS24860 PF13519 von Willebrand factor type A domain J4N44_RS24875 PF00005 ABC transporter J4N44_RS24880 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS24885 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS24890 PF12849 PBP superfamily domain J4N44_RS24895 PF02743 Cache domain J4N44_RS24895 PF00672 HAMP domain J4N44_RS24895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS24905 PF00270 DEAD/DEAH box helicase J4N44_RS24905 PF00271 Helicase conserved C-terminal domain J4N44_RS24915 PF17969 L,D-transpeptidase C-terminal domain J4N44_RS24915 PF03734 L,D-transpeptidase catalytic domain J4N44_RS24915 PF01476 LysM domain J4N44_RS24920 PF00875 DNA photolyase J4N44_RS24920 PF03441 FAD binding domain of DNA photolyase J4N44_RS24925 PF13411 MerR HTH family regulatory protein J4N44_RS24930 PF08349 Protein of unknown function (DUF1722) J4N44_RS24935 PF01048 Phosphorylase superfamily J4N44_RS24950 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS24960 PF11742 Protein of unknown function (DUF3302) J4N44_RS24965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS24965 PF00529 HlyD membrane-fusion protein of T1SS J4N44_RS24970 PF07155 ECF-type riboflavin transporter, S component J4N44_RS24975 PF00005 ABC transporter J4N44_RS24975 PF12558 ATP-binding cassette cobalt transporter J4N44_RS24990 PF01022 Bacterial regulatory protein, arsR family J4N44_RS24995 PF12801 4Fe-4S binding domain J4N44_RS24995 PF12837 4Fe-4S binding domain J4N44_RS25000 PF12800 4Fe-4S binding domain J4N44_RS25000 PF12838 4Fe-4S dicluster domain J4N44_RS25005 PF13302 Acetyltransferase (GNAT) domain J4N44_RS25020 PF07238 PilZ domain J4N44_RS25020 PF12945 Flagellar protein YcgR J4N44_RS25025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS25025 PF00672 HAMP domain J4N44_RS25025 PF12729 Four helix bundle sensory module for signal transduction J4N44_RS25030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS25030 PF00672 HAMP domain J4N44_RS25030 PF12729 Four helix bundle sensory module for signal transduction J4N44_RS25035 PF05362 Lon protease (S16) C-terminal proteolytic domain J4N44_RS25035 PF13654 AAA domain J4N44_RS25045 PF00005 ABC transporter J4N44_RS25045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS25050 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J4N44_RS25050 PF00326 Prolyl oligopeptidase family J4N44_RS25055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25055 PF03466 LysR substrate binding domain J4N44_RS25060 PF02652 L-lactate permease J4N44_RS25065 PF01070 FMN-dependent dehydrogenase J4N44_RS25075 PF00924 Mechanosensitive ion channel J4N44_RS25080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25080 PF03466 LysR substrate binding domain J4N44_RS25090 PF13378 Enolase C-terminal domain-like J4N44_RS25090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J4N44_RS25095 PF14492 Elongation Factor G, domain II J4N44_RS25095 PF03144 Elongation factor Tu domain 2 J4N44_RS25095 PF00009 Elongation factor Tu GTP binding domain J4N44_RS25095 PF03764 Elongation factor G, domain IV J4N44_RS25095 PF00679 Elongation factor G C-terminus J4N44_RS25115 PF02001 Protein of unknown function DUF134 J4N44_RS25125 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS25130 PF00005 ABC transporter J4N44_RS25130 PF00571 CBS domain J4N44_RS25155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25155 PF03466 LysR substrate binding domain J4N44_RS25180 PF06942 GlpM protein J4N44_RS25190 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J4N44_RS25190 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J4N44_RS25200 PF00857 Isochorismatase family J4N44_RS25205 PF00080 Copper/zinc superoxide dismutase (SODC) J4N44_RS25215 PF00199 Catalase J4N44_RS25215 PF06628 Catalase-related immune-responsive J4N44_RS25235 PF01238 Phosphomannose isomerase type I J4N44_RS25240 PF00155 Aminotransferase class I and II J4N44_RS25245 PF00367 phosphotransferase system, EIIB J4N44_RS25245 PF02378 Phosphotransferase system, EIIC J4N44_RS25250 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS25250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J4N44_RS25255 PF00455 DeoR C terminal sensor domain J4N44_RS25255 PF08220 DeoR-like helix-turn-helix domain J4N44_RS25260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS25265 PF01625 Peptide methionine sulfoxide reductase J4N44_RS25265 PF01641 SelR domain J4N44_RS25275 PF00367 phosphotransferase system, EIIB J4N44_RS25275 PF02378 Phosphotransferase system, EIIC J4N44_RS25280 PF01546 Peptidase family M20/M25/M40 J4N44_RS25285 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J4N44_RS25290 PF00456 Transketolase, thiamine diphosphate binding domain J4N44_RS25290 PF02780 Transketolase, C-terminal domain J4N44_RS25290 PF02779 Transketolase, pyrimidine binding domain J4N44_RS25295 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4N44_RS25300 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS25305 PF00465 Iron-containing alcohol dehydrogenase J4N44_RS25320 PF00455 DeoR C terminal sensor domain J4N44_RS25320 PF08220 DeoR-like helix-turn-helix domain J4N44_RS25335 PF07971 Glycosyl hydrolase family 92 J4N44_RS25335 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4N44_RS25340 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4N44_RS25340 PF07971 Glycosyl hydrolase family 92 J4N44_RS25350 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4N44_RS25350 PF07971 Glycosyl hydrolase family 92 J4N44_RS25355 PF17678 Glycosyl hydrolase family 92 N-terminal domain J4N44_RS25355 PF07971 Glycosyl hydrolase family 92 J4N44_RS25365 PF03466 LysR substrate binding domain J4N44_RS25365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25370 PF01810 LysE type translocator J4N44_RS25375 PF00581 Rhodanese-like domain J4N44_RS25390 PF13977 BetI-type transcriptional repressor, C-terminal J4N44_RS25390 PF00440 Bacterial regulatory proteins, tetR family J4N44_RS25395 PF03466 LysR substrate binding domain J4N44_RS25395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25410 PF12848 ABC transporter J4N44_RS25410 PF00005 ABC transporter J4N44_RS25415 PF13409 Glutathione S-transferase, N-terminal domain J4N44_RS25420 PF03358 NADPH-dependent FMN reductase J4N44_RS25425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25425 PF03466 LysR substrate binding domain J4N44_RS25430 PF09905 DNA-binding protein VF530 J4N44_RS25435 PF12848 ABC transporter J4N44_RS25435 PF00005 ABC transporter J4N44_RS25450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS25455 PF02567 Phenazine biosynthesis-like protein J4N44_RS25470 PF05114 Protein of unknown function (DUF692) J4N44_RS25485 PF01654 Cytochrome bd terminal oxidase subunit I J4N44_RS25490 PF02322 Cytochrome bd terminal oxidase subunit II J4N44_RS25510 PF13344 Haloacid dehalogenase-like hydrolase J4N44_RS25510 PF00293 NUDIX domain J4N44_RS25525 PF00561 alpha/beta hydrolase fold J4N44_RS25530 PF02311 AraC-like ligand binding domain J4N44_RS25530 PF12833 Helix-turn-helix domain J4N44_RS25535 PF17853 GGDEF-like domain J4N44_RS25535 PF12833 Helix-turn-helix domain J4N44_RS25545 PF01228 Glycine radical J4N44_RS25545 PF02901 Pyruvate formate lyase-like J4N44_RS25550 PF04055 Radical SAM superfamily J4N44_RS25555 PF00923 Transaldolase/Fructose-6-phosphate aldolase J4N44_RS25570 PF00672 HAMP domain J4N44_RS25570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS25570 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS25575 PF00486 Transcriptional regulatory protein, C terminal J4N44_RS25575 PF00072 Response regulator receiver domain J4N44_RS25585 PF00583 Acetyltransferase (GNAT) family J4N44_RS25595 PF07690 Major Facilitator Superfamily J4N44_RS25600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25600 PF03466 LysR substrate binding domain J4N44_RS25610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25610 PF03466 LysR substrate binding domain J4N44_RS25615 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J4N44_RS25625 PF00892 EamA-like transporter family J4N44_RS25645 PF13533 Biotin-lipoyl like J4N44_RS25655 PF01594 AI-2E family transporter J4N44_RS25660 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) J4N44_RS25675 PF00175 Oxidoreductase NAD-binding domain J4N44_RS25675 PF00970 Oxidoreductase FAD-binding domain J4N44_RS25685 PF09905 DNA-binding protein VF530 J4N44_RS25690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25690 PF03466 LysR substrate binding domain J4N44_RS25700 PF00881 Nitroreductase family J4N44_RS25710 PF00128 Alpha amylase, catalytic domain J4N44_RS25710 PF00686 Starch binding domain J4N44_RS25715 PF07943 Penicillin-binding protein 5, C-terminal domain J4N44_RS25715 PF00768 D-alanyl-D-alanine carboxypeptidase J4N44_RS25720 PF00561 alpha/beta hydrolase fold J4N44_RS25730 PF01809 Putative membrane protein insertion efficiency factor J4N44_RS25750 PF00268 Ribonucleotide reductase, small chain J4N44_RS25755 PF02867 Ribonucleotide reductase, barrel domain J4N44_RS25755 PF00317 Ribonucleotide reductase, all-alpha domain J4N44_RS25755 PF03477 ATP cone domain J4N44_RS25760 PF17773 UPF0176 acylphosphatase like domain J4N44_RS25760 PF00581 Rhodanese-like domain J4N44_RS25770 PF00875 DNA photolyase J4N44_RS25770 PF03441 FAD binding domain of DNA photolyase J4N44_RS25775 PF02469 Fasciclin domain J4N44_RS25785 PF01734 Patatin-like phospholipase J4N44_RS25790 PF01914 MarC family integral membrane protein J4N44_RS25795 PF00881 Nitroreductase family J4N44_RS25800 PF02563 Polysaccharide biosynthesis/export protein J4N44_RS25800 PF10531 SLBB domain J4N44_RS25800 PF18412 Outer-membrane lipoprotein Wza C-terminal domain J4N44_RS25805 PF01451 Low molecular weight phosphotyrosine protein phosphatase J4N44_RS25810 PF13614 AAA domain J4N44_RS25810 PF13807 G-rich domain on putative tyrosine kinase J4N44_RS25810 PF02706 Chain length determinant protein J4N44_RS25820 PF08803 Putative mono-oxygenase ydhR J4N44_RS25825 PF03466 LysR substrate binding domain J4N44_RS25825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS25855 PF00375 Sodium:dicarboxylate symporter family J4N44_RS25870 PF06803 Protein of unknown function (DUF1232) J4N44_RS25875 PF07687 Peptidase dimerisation domain J4N44_RS25875 PF01546 Peptidase family M20/M25/M40 J4N44_RS25880 PF07670 Nucleoside recognition J4N44_RS25885 PF07670 Nucleoside recognition J4N44_RS25900 PF00128 Alpha amylase, catalytic domain J4N44_RS25905 PF00912 Transglycosylase J4N44_RS25910 PF00128 Alpha amylase, catalytic domain J4N44_RS25910 PF02806 Alpha amylase, C-terminal all-beta domain J4N44_RS25910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N44_RS25915 PF02446 4-alpha-glucanotransferase J4N44_RS25920 PF00343 Carbohydrate phosphorylase J4N44_RS25925 PF00196 Bacterial regulatory proteins, luxR family J4N44_RS25925 PF17874 MalT-like TPR region J4N44_RS25940 PF02630 SCO1/SenC J4N44_RS25950 PF00367 phosphotransferase system, EIIB J4N44_RS25950 PF02378 Phosphotransferase system, EIIC J4N44_RS25955 PF03193 RsgA GTPase J4N44_RS25960 PF00375 Sodium:dicarboxylate symporter family J4N44_RS25965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N44_RS25965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4N44_RS25980 PF01116 Fructose-bisphosphate aldolase class-II J4N44_RS25990 PF00294 pfkB family carbohydrate kinase J4N44_RS25995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J4N44_RS25995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J4N44_RS26000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J4N44_RS26000 PF00205 Thiamine pyrophosphate enzyme, central domain J4N44_RS26000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J4N44_RS26005 PF01261 Xylose isomerase-like TIM barrel J4N44_RS26010 PF00083 Sugar (and other) transporter J4N44_RS26015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS26015 PF03466 LysR substrate binding domain J4N44_RS26025 PF01261 Xylose isomerase-like TIM barrel J4N44_RS26030 PF00108 Thiolase, N-terminal domain J4N44_RS26030 PF02803 Thiolase, C-terminal domain J4N44_RS26035 PF01144 Coenzyme A transferase J4N44_RS26040 PF01144 Coenzyme A transferase J4N44_RS26050 PF08543 Phosphomethylpyrimidine kinase J4N44_RS26060 PF13520 Amino acid permease J4N44_RS26065 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain J4N44_RS26065 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain J4N44_RS26065 PF01276 Orn/Lys/Arg decarboxylase, major domain J4N44_RS26080 PF17967 Pullulanase N2 domain J4N44_RS26080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J4N44_RS26080 PF11852 Domain of unknown function (DUF3372) J4N44_RS26080 PF03714 Bacterial pullanase-associated domain J4N44_RS26080 PF18494 Pullulanase Ins domain J4N44_RS26085 PF02595 Glycerate kinase family J4N44_RS26090 PF17853 GGDEF-like domain J4N44_RS26090 PF05651 Putative sugar diacid recognition J4N44_RS26090 PF13556 PucR C-terminal helix-turn-helix domain J4N44_RS26100 PF01979 Amidohydrolase family J4N44_RS26125 PF13419 Haloacid dehalogenase-like hydrolase J4N44_RS26145 PF03466 LysR substrate binding domain J4N44_RS26145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS26160 PF00005 ABC transporter J4N44_RS26160 PF00664 ABC transporter transmembrane region J4N44_RS26165 PF00005 ABC transporter J4N44_RS26165 PF00664 ABC transporter transmembrane region J4N44_RS26170 PF07715 TonB-dependent Receptor Plug Domain J4N44_RS26170 PF00593 TonB dependent receptor J4N44_RS26180 PF12833 Helix-turn-helix domain J4N44_RS26185 PF03974 Ecotin J4N44_RS26190 PF01810 LysE type translocator J4N44_RS26195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J4N44_RS26210 PF01204 Trehalase J4N44_RS26220 PF12706 Beta-lactamase superfamily domain J4N44_RS26230 PF07690 Major Facilitator Superfamily J4N44_RS26235 PF13533 Biotin-lipoyl like J4N44_RS26245 PF16868 NMT1-like family J4N44_RS26250 PF03922 OmpW family J4N44_RS26255 PF13599 Pentapeptide repeats (9 copies) J4N44_RS26280 PF00893 Small Multidrug Resistance protein J4N44_RS26290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading J4N44_RS26290 PF18416 N-acetylglucosamine binding protein domain 2 J4N44_RS26295 PF01037 Lrp/AsnC ligand binding domain J4N44_RS26300 PF01810 LysE type translocator J4N44_RS26305 PF00326 Prolyl oligopeptidase family J4N44_RS26310 PF08021 Siderophore-interacting FAD-binding domain J4N44_RS26310 PF04954 Siderophore-interacting protein J4N44_RS26315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS26315 PF03466 LysR substrate binding domain J4N44_RS26325 PF00797 N-acetyltransferase J4N44_RS26330 PF08240 Alcohol dehydrogenase GroES-like domain J4N44_RS26330 PF00107 Zinc-binding dehydrogenase J4N44_RS26335 PF00756 Putative esterase J4N44_RS26345 PF05656 Protein of unknown function (DUF805) J4N44_RS26355 PF17152 Periplasmic sensor domain J4N44_RS26355 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS26375 PF00849 RNA pseudouridylate synthase J4N44_RS26380 PF01554 MatE J4N44_RS26385 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS26390 PF00005 ABC transporter J4N44_RS26390 PF17912 MalK OB fold domain J4N44_RS26395 PF00232 Glycosyl hydrolase family 1 J4N44_RS26400 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS26405 PF00528 Binding-protein-dependent transport system inner membrane component J4N44_RS26415 PF00356 Bacterial regulatory proteins, lacI family J4N44_RS26420 PF02264 LamB porin J4N44_RS26425 PF03707 Bacterial signalling protein N terminal repeat J4N44_RS26425 PF00563 EAL domain J4N44_RS26425 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS26435 PF06865 Pyrimidine/purine nucleoside phosphorylase J4N44_RS26445 PF08329 Chitinase A, N-terminal domain J4N44_RS26445 PF00704 Glycosyl hydrolases family 18 J4N44_RS26465 PF03600 Citrate transporter J4N44_RS26485 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J4N44_RS26495 PF16325 Peptidase family U32 C-terminal domain J4N44_RS26495 PF01136 Peptidase family U32 J4N44_RS26505 PF01116 Fructose-bisphosphate aldolase class-II J4N44_RS26510 PF01979 Amidohydrolase family J4N44_RS26515 PF03610 PTS system fructose IIA component J4N44_RS26520 PF03613 PTS system mannose/fructose/sorbose family IID component J4N44_RS26525 PF03609 PTS system sorbose-specific iic component J4N44_RS26530 PF03830 PTS system sorbose subfamily IIB component J4N44_RS26535 PF01380 SIS domain J4N44_RS26540 PF08013 Tagatose 6 phosphate kinase J4N44_RS26545 PF08220 DeoR-like helix-turn-helix domain J4N44_RS26545 PF00455 DeoR C terminal sensor domain J4N44_RS26550 PF08220 DeoR-like helix-turn-helix domain J4N44_RS26550 PF00455 DeoR C terminal sensor domain J4N44_RS26560 PF00005 ABC transporter J4N44_RS26565 PF02687 FtsX-like permease family J4N44_RS26565 PF12704 MacB-like periplasmic core domain J4N44_RS26595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J4N44_RS26595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J4N44_RS26600 PF06029 AlkA N-terminal domain J4N44_RS26600 PF00730 HhH-GPD superfamily base excision DNA repair protein J4N44_RS26610 PF07681 DoxX J4N44_RS26615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS26615 PF03466 LysR substrate binding domain J4N44_RS26630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J4N44_RS26645 PF01261 Xylose isomerase-like TIM barrel J4N44_RS26650 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J4N44_RS26660 PF00596 Class II Aldolase and Adducin N-terminal domain J4N44_RS26665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J4N44_RS26670 PF03611 PTS system sugar-specific permease component J4N44_RS26675 PF00455 DeoR C terminal sensor domain J4N44_RS26675 PF08220 DeoR-like helix-turn-helix domain J4N44_RS26685 PF03616 Sodium/glutamate symporter J4N44_RS26690 PF00155 Aminotransferase class I and II J4N44_RS26690 PF00392 Bacterial regulatory proteins, gntR family J4N44_RS26695 PF00005 ABC transporter J4N44_RS26710 PF03616 Sodium/glutamate symporter J4N44_RS26715 PF00132 Bacterial transferase hexapeptide (six repeats) J4N44_RS26730 PF00672 HAMP domain J4N44_RS26730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J4N44_RS26730 PF17200 Single Cache domain 2 J4N44_RS26735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J4N44_RS26740 PF00072 Response regulator receiver domain J4N44_RS26740 PF04397 LytTr DNA-binding domain J4N44_RS26745 PF06580 Histidine kinase J4N44_RS26745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS26745 PF13492 GAF domain J4N44_RS26745 PF07694 5TMR of 5TMR-LYT J4N44_RS26765 PF00005 ABC transporter J4N44_RS26775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J4N44_RS26775 PF03466 LysR substrate binding domain J4N44_RS26780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J4N44_RS26790 PF01098 Cell cycle protein J4N44_RS26795 PF01709 Transcriptional regulator J4N44_RS26805 PF00072 Response regulator receiver domain J4N44_RS26805 PF01627 Hpt domain J4N44_RS26805 PF00512 His Kinase A (phospho-acceptor) domain J4N44_RS26805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J4N44_RS26805 PF00672 HAMP domain J4N44_RS26805 PF17149 Periplasmic sensor domain found in signal transduction proteins J4N44_RS26815 PF08719 Domain of unknown function (DUF1768) J4N44_RS26815 PF00925 GTP cyclohydrolase II J4N44_RS26825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS26825 PF00005 ABC transporter J4N44_RS26830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J4N44_RS26830 PF00005 ABC transporter J4N44_RS26845 PF13614 AAA domain J4N44_RS26845 PF18607 ParA helix turn helix domain J4N44_RS26885 PF11799 impB/mucB/samB family C-terminal domain J4N44_RS26885 PF00817 impB/mucB/samB family J4N44_RS26885 PF13438 Domain of unknown function (DUF4113) J4N44_RS26930 PF00816 H-NS histone family J4N44_RS27090 PF00765 Autoinducer synthase J4N44_RS27160 PF01555 DNA methylase J4N44_RS27195 PF08808 RES domain J4N44_RS27290 PF04245 37-kD nucleoid-associated bacterial protein J4N44_RS27345 PF04002 RadC-like JAB domain J4N44_RS27455 PF01206 Sulfurtransferase TusA J4N44_RS27510 PF00239 Resolvase, N terminal domain J4N44_RS27510 PF02796 Helix-turn-helix domain of resolvase J4N44_RS27610 PF00563 EAL domain J4N44_RS27610 PF08668 HDOD domain J4N44_RS27830 PF00482 Type II secretion system (T2SS), protein F J4N44_RS27835 PF00437 Type II/IV secretion system protein J4N44_RS27925 PF00563 EAL domain J4N44_RS27925 PF00990 Diguanylate cyclase, GGDEF domain J4N44_RS27925 PF13426 PAS domain J4N44_RS28005 PF01131 DNA topoisomerase J4N44_RS28005 PF01751 Toprim domain J4N44_RS28040 PF00271 Helicase conserved C-terminal domain J4N44_RS28040 PF04851 Type III restriction enzyme, res subunit J4N44_RS28070 PF00145 C-5 cytosine-specific DNA methylase J4N44_RS28115 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase J4N44_RS28115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase